APT61_RS00035    7157 ..    7171 +  -4.9  -3.15861   CACGCAGACAATAAA               CGGCC CACGC GGCTG               TTCGTCGAAATCCTG  47 515
        trkD   11767 ..   11786 + -12.2  -4.36595   TGCAAACATAAAAAA            CGGTAACC AGAG GGTTACCG             TTTTGCATTTAACTC  95 93
APT61_RS00055 NONE
APT61_RS00060 NONE
        rbsC NONE
APT61_RS00070   15807 ..   15832 + -10.3  -2.94218   AGAAAAGAGTGGCAT         ACGCCACCGGG TTAT CCCGGTGGCAC          TCTCTGATGGACACT  72 86
APT61_RS00075 NONE
APT61_RS00080   17985 ..   18012 +  -6.2   -3.4252   AAGCTGCTGCGTGAC        TGCCAGCATGCTG TTA CCGCC-GCTGGCA        TTCTCATCGCTGAGA  56 231
APT61_RS00100   21981 ..   21997 +  -6.5  -2.55847   GACGGCTGCGAAGTC              GTGACAC ATC GTGTCCC              CTTCGTCTAGCGGTT  52 91
APT61_RS00105   22103 ..   22150 +    -8  -4.00532   GGCACAACCAATCAG TATCTCAAAGCTGATTAACTAT GAAA ATAGTGAGTCATGTTTGAGATA TTTGCTCTTTAAAAA  73 61
APT61_RS00110 NONE
         rrf   25407 ..   25442 + -15.6  -3.28712   CCAGGCATCAAATCA    GGTAAAAAGCCCATCC TCAC GGATGGGCTTTTTGCG     TTGTGGCGCCGGGCA 100 35
APT61_RS00130   26970 ..   26983 +  -2.3   -3.1211   GCTTGTAAGAGGCGC               CACCG TAAA CGCTG                TTAAATGATATCCTC  43 43
APT61_RS00135 NONE
APT61_RS00140   28675 ..   28693 +   -16  -5.09762   AAGTAATAAAGAAAA             CGCCGGTC AAT GACCGGCG             TTTTTGTATTCCGCT 100 35
APT61_RS00150   33041 ..   33066 + -19.1   -5.4505   GCTGAATATTTTAGC         CGCCCCAGTCA GTAA TGACTGGGGCG          TTTTTTATTGCGGCA 100 249
APT61_RS00160   34887 ..   34905 +  -6.1   -3.3636   CTTTATCGTCCTGCT             TATAACC CTTCC GGTTATA             TGTTATCTGGTGTGG  57 58
APT61_RS00165   36678 ..   36701 +  -5.3  -3.40639   CATCGGAACAGTAAA          GCGCAAAAT AGCGGC AGTTTGCGC           TTAATTAATGCACTT  54 287
APT61_RS00185   43071 ..   43090 + -13.6   -5.4505   CCCGGTAACTAAAAA            GCCGCTGA TCCC TCAGCGGC             TTTTTTATTAGAACG 100 78
APT61_RS00225 NONE
APT61_RS00230   53736 ..   53761 + -13.3   -3.5292   CGGTTTTTGCTCTCA         CGGCCTGGCAGG TAC CCTGC-GGGCCG         TTCCTTCCTTTCTGT  91 53
APT61_RS00235   54431 ..   54441 +  -3.2  -3.41051   CAATACCTGACTATT                 TTGC GAA GCAG                 TTATGCTAAAAATCG  48 6
APT61_RS00240 NONE
APT61_RS00245 NONE
APT61_RS00250   56755 ..   56787 +  -4.9  -2.68823   GAGTAGTGATATTCA      AAGAGAGTTATCTTT TCA GGAGATAACTCTCAC      GTTATATCAGAAGCG  46 35
APT61_RS00355   82697 ..   82711 +  -2.9  -4.17762   AGCGGTTGACTATTG               TTCAA TAAAT TTGAA               TTCTTTTAGCAAATC  59 18
APT61_RS00360   83054 ..   83068 + -12.8  -5.42514   GTTTTTGTCGAAAGA               GCGCCC CCG GGGCGC               TTTTTTAGTTTATAC 100 48
APT61_RS00375 NONE
APT61_RS00380   85760 ..   85782 +    -7  -3.60098   ATCACAAATCCGAAA           CGTTTTGGTT TCT ATCCGAAACG           TTTCGGATCAACACT  64 63
APT61_RS00385   87958 ..   87975 + -14.1  -3.07895   GCGTATAAGGGTAAT             GGGCCGG GCAA CCGGCCC              TGTGTTGAGGATAAA  90 33
        lacY   89281 ..   89302 + -15.9  -3.33261   GTAAAACACCTCTTG           CAGCCCGGT ACTC ACCGGGCTG            TTGTCCGGGTTAGAC 100 37
APT61_RS00440 NONE
APT61_RS00445  101794 ..  101810 +  -2.3  -3.06399   ATTAAAACTACGGCA              TTGATAA ACA TTTTCAA              TATCATTTAATTAAC  42 115
APT61_RS00450  102534 ..  102551 + -11.3  -5.60993   AGCCGTCTGTGAGAA             GCGAGTC TGAT GACTCGC              TTTTTTTATACCCAC 100 49
APT61_RS00455  103262 ..  103289 +  -4.8  -4.70659   TTGTGGGGGAAGTAA        GCCGGGT-AAAAC GGA GTCTCCACCCGGC        TTTTTGCCTCTGCGC  73 26
        cpxP  106119 ..  106137 + -14.6  -5.76949   CACCATCCCTGTCTT             CCCCCACA TGA TGTGGGGG             TTTTTTTTGCCCGTC 100 62
        fieF NONE
APT61_RS00480  108327 ..  108353 + -10.2   -4.6644   ACACCGTGACTCCAG        GCCGGGTAGGT TTAGCC ACC-ACCCGGC         TTTTTAACGTCTATT 100 76
APT61_RS00485  109488 ..  109512 + -14.3  -5.73978   CCATAGTGTTTGCAA          GCCCGACAGCA TCA TACTGTCGGGC          TTTTTTGTTTGTCAT 100 45
APT61_RS00490 NONE
APT61_RS00495  111698 ..  111733 +  -4.6  -4.15543   CGTGCTGGGGAAATT    ATAATTTCCCTCTCCC CGGG GGGAGAGGGAGAAGGG     TTTTACGCCTGTTTA  64 22
APT61_RS00510  113770 ..  113810 +  -6.8  -3.36837   GCTCTGCAGTCATAT GGCCCGGCCGACGGCGTAA ATGC TTG-GTCATCTGCCGGGTC  TCTTTCAGCAGTTGT  58 52
APT61_RS00535  118799 ..  118817 +  -7.4  -5.63517   CGAATTTTTGAAAAA             GGCATCTG TAA TGGATGCC             TTTTTTATTTGGAGA 100 44
APT61_RS00540  119535 ..  119552 +  -2.1  -3.42182   TGTTCGTGAGCTTAG             CTTATGAA AAA TTC-TAAG             TTGATAGTTTTTACT  45 19
APT61_RS00545  119938 ..  119960 +   -12  -3.38316   GAAATAAATAAAGAA           GGCCATCTAG ATA CCAGATGGCC           TTCATTCACTACTCA  85 30
        rpmE  128362 ..  128375 +  -9.5  -6.11644   AGCATCCAGAAGAAA               CCGCC TCAG GGCGG                TTTTTTTTTGCCTGC 100 40
APT61_RS00590  129754 ..  129770 +  -3.5  -3.54741   ATATGAGGCCGACAC              CGCAGCG GTT CGCAGGG              TTTCGCGCCATAATC  50 431
APT61_RS00600 NONE
        metL  133727 ..  133784 +  -2.7   -5.5112   TCCTGGCAGAGGTTA CGGC-CCGGCGCTGTTTTC-CTTCCTCG CTCCT CTGGGAAGAGGGTACGGC-CCGGCGCTG TTTTTTCTTCCTCGC  80 168
        metF  135080 ..  135099 +   -10  -5.27938   GTCTGTAAAGGCAAG            TCCCTCAC GGTT GTGGGGGA             TTTTTATTTCGGGCT 100 33
APT61_RS00615  137397 ..  137414 + -12.7  -5.66684   CTGTAAACAGAAAAA             TCCCCGC TCCG GCGGGGA              TTTTTTTATCGGTTA 100 35
APT61_RS00635 NONE
APT61_RS00640  143512 ..  143529 + -14.1  -4.55887   ACCGCTTAATCCTTT             CCCGCCC ATTC GGGCGGG              TTTGTATTTTTACAG 100 32
        pflD NONE
APT61_RS00650  146680 ..  146690 +  -2.4  -2.55668   TGCCGGATTTGAGGT                 CACC GTA GGAG                 GTTAATATGACAGTG  39 10
APT61_RS00655  147093 ..  147114 +  -2.1  -4.56597   ATACTGCCGGCGATA           TTCCGAGGG GGAG CGCTCGGTG            TTTTTACGGAACAGG  66 65
APT61_RS00675 NONE
APT61_RS00680  153928 ..  153941 +  -2.3  -2.90075   CTGGCTTAATATTTA               ATGCC CGGC GGCAC                TCTGCTTGCCGGGCC  40 32
APT61_RS00685  155460 ..  155477 +  -9.9  -4.73108   AGCACACCCTAAAAA             TGGCAAC TTCG GTTGCCA              TTTTGCTTTTATCCC 100 89
APT61_RS00690  156685 ..  156723 +  -5.3  -4.75372   GGTCGGGTAGTTAAA   GGTGGTGTTAACAAAAT ACTCG ATGGTGTTACCGCCACC   TTTTTGCTCCATGAT  79 77
APT61_RS00700 NONE
APT61_RS00705  159333 ..  159360 +   -12  -3.45839   AACTGATCGAACAAT        GCCAGACGTTCA ACCT TGTGCGTCTGGC         TTAATGTTTCCAGGT  76 137
        btuB NONE
APT61_RS00720  163705 ..  163722 +  -2.7  -2.93853   GTCTCTGAGTGAACA             TACGTAA TTCA TTACGAA              GTTTAATTCACGAGC  43 365
APT61_RS00730  165307 ..  165320 +  -2.3  -2.72471   AAGAACCTGCCTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  39 36
APT61_RS00735  165437 ..  165450 +  -5.3  -3.56594   CTCAGGCCTACCAAA               TTTGC AAAC GCAAA                TTTGAAGAGATTTAA  56 28
APT61_RS00740  165573 ..  165606 +  -6.7  -4.49756   GCGACAACAAGAAAA     CTTCAGAGTGTACCT GAGA AGGTGCGCTGCGAAG      TTTTGCTCTTTAAAA  77 50
APT61_RS00745 NONE
         rrf  168875 ..  168891 +  -6.5  -2.71483   AAATTACGTAGTGAA              CCGGG GCAGTAA CCCGG              TGGTTACAGAAGTAT  53 44
APT61_RS00755  169003 ..  169021 + -10.3  -3.21218   ACCTATTTAAACTAA             GCCTGCT TTATT AGCAGGC             TTAGTGGTAAGAAAT  73 40
APT61_RS00760  169124 ..  169143 + -10.8     -6.13   CTGCCATATAAAGGA            TCCTTTGC TTCG GCAAAGGA             TTTTTTTTTGCGTCT 100 35
APT61_RS00770  170503 ..  170516 +  -9.5  -5.21709   GACGATTAAGAAAAA               GGGGC TACG GCCCC                TTTTTTCATCTCAGC 100 32
APT61_RS00780 NONE
        ilvM NONE
APT61_RS00790  175490 ..  175511 + -11.6  -3.55444   CAATAAGCATAAATA           TGGGACGG CACGCA CCGTCCCA            TTTACCAGATAGACG  83 35
APT61_RS00795 NONE
APT61_RS00800  179004 ..  179020 +  -9.4  -5.60993   AGAACGCATCAATAA              GCGGCT CATGC AGCCGC              TTTTTTTGTGCGCAC 100 91
APT61_RS00810  181569 ..  181590 + -15.9   -5.1963   GCCACCCGAAAAAAA           GCCCGGAGT TCAA ACTCCGGGC            TTTTTATTAGTTACG 100 110
APT61_RS00825  184609 ..  184623 +  -5.6  -4.30576   AGATGTTCCGCAACG               CGCGGT GGT ACCGCA               TTTTGCTGGTGGAGC  69 291
        trxA  187627 ..  187674 +  -9.8  -3.10715   GGCGTAAGGTTCTCG TCTGAGCGTCCAGAGTTTCTAA ATTG TTTGGATCTCTGGACGCCCGGC TTGAGTCATGCTAAG  70 34
         rho  189235 ..  189254 + -13.6  -5.54907   AATAAACCGCCGAAA            CGCCACGT TTTT ACGTGGCG             TTTTTCTTTTCTGAC 100 45
APT61_RS00850 NONE
APT61_RS00855  191638 ..  191648 +  -8.2  -3.17212   GCCATCTACGATGAA                 GGCC TGT GGCC                 TTCATCGCCTAATCG  64 45
APT61_RS00860 NONE
        wecC NONE
APT61_RS00870 NONE
APT61_RS00875 NONE
APT61_RS00880  197119 ..  197132 +  -2.3  -2.74012   TACTTTGGCATAAAC               GCGCA TGAC TGCAC                TGATTCACGTCCTGG  39 18
APT61_RS00885 NONE
APT61_RS00890 NONE
APT61_RS00895  200347 ..  200362 +  -3.2  -4.54047   TCGCGCTGCAACCTG              CCAGCA AACC TGCTGC               TTTTCTGTGCAATAC  66 68
APT61_RS00900 NONE
APT61_RS00905  202142 ..  202159 +  -2.5  -2.76322   GGGCGCACCATTTAC             CCGGTGC TGGA GCTGCGG              TGGTCTGTTAAGTAG  40 31
APT61_RS00910 NONE
APT61_RS00915 NONE
APT61_RS00920  202520 ..  202535 + -11.8  -5.86976   CCGACCAATTTTGAA              CCCCGC TTCG GCGGGG               TTTTTTGTTTTCTGC 100 34
APT61_RS00925  203179 ..  203198 + -13.6  -5.80248   AACAGACCTGTTTAA            CGCCTGCT TTTT AGCAGGCG             TTTTTTTATGTCTTA 100 445
        cyaA  211661 ..  211679 + -10.3  -5.29445   GGTAAATCCAAAAAA             GCGTCTC CTGAA GAGACGC             TTTTTGTTATTAGCC 100 145
APT61_RS00965 NONE
        dapF NONE
APT61_RS00975 NONE
        xerC NONE
APT61_RS00985  215583 ..  215608 + -13.3  -2.52082   GTCGTAGGCCCGGTA         AGCAAAGCGCC ACCG GGCGCTTTGCA          GTGTTCCTGATTACT  84 78
        uvrD  217847 ..  217875 +  -6.7  -3.20878   GCTGCCAGGCTTAAA        CGTTGAAGGGCAT TTT AAGTTCTTCAGCG        TTCCGTTGCGTGTTG  57 72
APT61_RS00995  219113 ..  219140 +  -7.7  -3.51436   GGCTTTAAGTGTTAT       GCCGGGT--GGCG ATGA CGCCTTGCCCGGC        TATTTCCTGTCCATT  66 33
APT61_RS01010  221651 ..  221672 + -12.3  -5.27335   TTGAAGTTTCTCTCG           CAGGCGCTG AAAA TAGCGCCTG            TTTTTATTTCAGGCA 100 68
APT61_RS01015  223582 ..  223600 +  -2.4  -3.52906   GAACTATTTCCCCGC             GAGTTAAT TAT GTTAACCC             TGTTTCTGACCGTGG  47 78
APT61_RS01020  224637 ..  224653 +  -7.9  -3.57561   CCCAGCCAGATAAGA              TAGGCCG CAC CGGCCCA              TTTCAGCACTTCGAA  62 451
APT61_RS01030  225989 ..  226003 +  -2.8  -3.23018   CAGGCATAACTGATA               TTCACC AGA GGTTAA               ATTTTCCTATGTACC  45 28
APT61_RS01035  226799 ..  226811 +  -2.7  -2.62098   AATACCTGCGTAAGC                TGTTC CTT GAATA                ATCTTCATTTGGTTG  41 12
APT61_RS01040  227860 ..  227872 +  -4.8  -4.25104   AACCGGCTCCACAAT                CCCT CGCCC AGGG                TTTTGGTCACCACCA  64 91
APT61_RS01050  231436 ..  231455 +  -7.9  -2.50074   GGCGCATGGTCTCCA            CGGTATC AAGCGG GATACCG             GTATCTTCTGCCCCA  53 325
APT61_RS01060  233098 ..  233114 +  -9.4  -5.30616   CTTTTCTCTGCCAAA              GGCCGA CCTGT TCGGCC              TTTTTCTTTGCGTAG 100 47
APT61_RS01065  234634 ..  234656 +  -9.1  -2.71731   ACAGGCGTCGGCAGC           CCCCTGGAA CGTTA TTCCTGGGG           TGGTTGAAACGTAGG  63 67
        ubiE  235493 ..  235504 +  -3.6  -3.58037   AGTTCTGAGTGGAGG                TGGC GAAT GCCG                 TTTAAACCCTTGATC  50 33
APT61_RS01075 NONE
        ubiB  237760 ..  237783 +   -11  -2.86164   GCGTCGCTATAGCAG          GGCCGCATAA CGTA TAATGCGGCC           TGATTAATTAATCGT  74 44
APT61_RS01085 NONE
APT61_RS01090 NONE
APT61_RS01095  239371 ..  239392 + -15.9  -2.62184   ACAAAAGAGTAACAT           CAACCGCCC GCCA GGGCGGTTG            TCATATGGGAGCCAG 100 29
APT61_RS01100  240541 ..  240566 +  -3.9  -3.60762   GGAACAGCGGTTCAC         TGACGGTGGTG CGTT TACCACGGACA          ATTTTTTCCAGCGTG  51 375
APT61_RS01110  242339 ..  242354 +    -6  -2.60763   ATGAATAACGGTAAA              GACGCC TGAC GGCGCC               GTTATGCCCTATAGA  51 17
         fre  243186 ..  243219 +  -5.1  -3.10409   GGCTGCCTTCGCTCC     CCCCCGGTCACATAG TTTA CTATGCTCCCGGGGA      TTCGCTCAGTTACTG  52 120
APT61_RS01130 NONE
APT61_RS01135 NONE
APT61_RS01140 NONE
        hemG  250799 ..  250813 +  -8.5  -3.73775   AAATTGCGCAATTAA               CCCGC AATTC GCGGG               TTTAATAAACGTAAA  71 6
APT61_RS01155 NONE
APT61_RS01160 NONE
APT61_RS01165  253017 ..  253050 +  -6.7  -4.49756   GCGACAACAAGAAAA     CTTCAGAGTGTACCT GAAA AGGTGCGCTGCGAAG      TTTTGCTCTTTAAAA  77 51
APT61_RS01170  256106 ..  256126 +  -2.5  -4.15565   CTTACAACGCCGAAG            CTGTTTCGG CGA CTGAGACAA            TTTTCAGCTGATACA  57 21
         rrf  256314 ..  256335 + -15.9  -5.34555   GCATCAAATCGGAAA           CCCCGTACC GCAA GGTACGGGG            TTTTTTGTCGTCTGC 100 39
        murB NONE
APT61_RS01185  258677 ..  258687 +  -4.6  -3.89881   AACAGTTGATTAACC                 TGCG TTT CGCG                 TTTCTGGAGATTCAT  59 195
APT61_RS01190  260813 ..  260846 +  -5.2  -5.06414   GGTGCTATTTTAAGG     CCGCAGGT-GAGCAG TAACC CTACACTGCCTGCGG     TTTTTCTTCCCAAGG  82 128
APT61_RS01195  262324 ..  262348 +  -8.6  -3.85817   TGAACATTATCTTTA          GAGTGCGACA GGGCG TGTGGCACTC          TTTGTAACCAGGAAT  73 194
APT61_RS01200  263818 ..  263833 +    -9  -5.31877   CAATAAAAGCAAAAA              GGCAAC GTAA GTTGCC               TTTTTTATGCTCCCT 100 35
APT61_RS01210  265815 ..  265867 + -15.6  -2.64298   ATCACCCTGTAACCC CGGCTGCTTCCCATAATAGCGCGT GGTTA ACGCGTTATTACCGGACGCTGCCG CTCCTTTTTTCCTCG  95 29
APT61_RS01215  268023 ..  268052 +  -8.6  -4.19238   CAGGGAGTGAATCAA      TGCCGGGTAAGGCG TAAC CGCC--GCCCGGCA       TTTTCACATTAAAGG  77 78
APT61_RS01235  272605 ..  272628 +  -4.5  -3.55622   ACAGCCAGTCATTGT          GCCATTGGC CTGCCA GCCAGTAGC           TTTCGCGCAGTTCCC  53 102
APT61_RS01245  274881 ..  274895 + -11.4  -3.85698   TACAGGCCGATCAGG               CGGCGT ACC ACGCCG               TTTGTCCAGCCAAAA  81 66
APT61_RS01260  278489 ..  278506 +  -4.8  -3.51934   TGAAACATAAAAAAA             CCGG-CC ACTGA GGACCGG             TCTTTATAAGCGCAA  55 464
APT61_RS01280  283062 ..  283073 +  -2.2  -3.18264   AGGGTTAGTGAATTC                GTGA AGAT TCGC                 TTAGTAGATGAAACA  43 33
APT61_RS01285  284071 ..  284095 +  -5.5  -3.71794   TCGACCAGCACCTGG          CCCAGATCGCC GCT GCCGCTCAGGG          TTTCGGTGATTGGAT  58 270
APT61_RS01295  284981 ..  285005 + -14.3  -4.08216   GCGATTGAGCGCAAA          GGAAGGCGGGT ATA GCTCGCCTTCC          TTTTGCCACCCATCA 100 43
APT61_RS01310  288663 ..  288687 + -19.3  -4.07618   GTTAAAATAGTCCAT          CCGGCGCAGGG AGA TCCTGCGCCGG          TTTACTTCTTAAGGG 100 76
APT61_RS01315  289861 ..  289894 + -11.2  -4.15106   GGCCTGCACTCTTCA    TAAACCGGGTAAGGCG AAGT CGCC--ACCCGGTTTA     TTTTACGGCTTGATG  87 72
APT61_RS01425  309739 ..  309789 + -19.1  -3.33162   GTTTCATTGCGGGGC CGCGGGGAT-TGACAAGGGGGGCC CGGC GGCCCCCCTTGTCACGTTCACGGG TTGTGGAATGCCATG 100 519
APT61_RS01440  311878 ..  311896 + -14.6  -4.27584   GCGCAAATCCTGAAA             CGGCAACC TGA GGTTGCCG             TTTTGCATTGGCCCT 100 100
APT61_RS01445 NONE
APT61_RS01450 NONE
APT61_RS01455  314960 ..  314989 +  -6.4  -5.40072   TTACGATTTTTTATA      GGCCCGGTAAGGCG TAGC CGCC--ACCGGGCA       TTTTTTTACCCACGC  93 74
APT61_RS01470  318362 ..  318372 +  -3.2  -4.46212   TCGAGGGATTTAAGA                 TCGC GCC GTGA                 TTTTCTCCTGGAGAA  63 15
APT61_RS01485 NONE
APT61_RS01490 NONE
        ftsX  322739 ..  322756 +  -5.5  -3.68024   TTGAGAATCGCTATG             CAGGGAA AGAG TCCCCTG              TTGTCTCTTACCCCG  59 69
APT61_RS01500  323831 ..  323852 + -12.3  -5.55855   GAAGTGACCCGATAA           CCCCTGGAT GAGA ATCCGGGGG            TTTTGTTTTTTTAGC 100 48
APT61_RS01505  325215 ..  325235 + -18.3  -4.67641   CTAAATAACGCATTA            TGCCCGGCG AAC CGCCGGGCA            TTTTCGTTTTACCAT 100 33
APT61_RS01525 NONE
APT61_RS01530 NONE
        livM  332057 ..  332070 +  -3.1  -2.90403   AGCGAAAGGAGAGCA               GGCATG AGT CA-GCC               ATTATTATCCGTTAA  42 19
        livG NONE
        livF  333555 ..  333570 +    -9  -5.32699   TAGTAAAAGCAAAAA              GGCAAC GTAA GTTGCC               TTTTTTAATGTTTGC 100 38
APT61_RS01550  335333 ..  335349 +  -5.8  -4.87665   CCATAGGGGAGAGGG              GACGGT ACGGA GCCGTC              TTTTTCTCCCTCACC  81 73
APT61_RS01555 NONE
APT61_RS01560 NONE
        ugpC NONE
        ugpQ  339676 ..  339697 +  -9.4  -2.77167   TTGCATCCGCTGCTG           GCTGGGGT TTTGAT ACCCCGGC            TGGTTAGGGTTGTTC  61 295
         ggt  341922 ..  341976 +  -4.9  -3.14136   GGGAGGGGCAAAAGA CC-GCACCTTACAGT-CCCCTCTCCCC TAT GGGGAGAGGGTTAGGGTGAGGGGAAGG TTAACTACTTCATCC  50 299
APT61_RS01590  343904 ..  343920 +    -3  -3.69976   TTGCCAGATAAGCCT              GAACGA CTCCT TTGTTC              TTGTTCAGATATTTT  51 30
APT61_RS01595  344732 ..  344766 + -12.9  -3.93695   AAATCTTAAATTAAT     GTCCAGCCTTCCCTT ATGAC AGGGGAAGGTTGGTC     TTTGTCCGTGATAAA  93 39
APT61_RS01600  345896 ..  345907 +    -3  -3.04144   CCCCGGCAGGACAAT                GTTA CCGA TAAC                 TGTTACCCGTAACAA  43 107
        gntK NONE
APT61_RS01610  347915 ..  347930 +    -9  -5.10154   GACAAAACTTAAAAA              GGCAAC TTAC GTTGCC               TTTTTGCTTTTACCT 100 128
APT61_RS01620  349836 ..  349853 + -11.3  -5.48825   AATACTTAAGACTAA             GGGGTGA TTTA TCACCCC              TTTTTTTGCGTACTA 100 43
APT61_RS01625 NONE
APT61_RS01630 NONE
        glgC NONE
        glgA NONE
APT61_RS01645  359450 ..  359469 +   -15  -5.19879   ACTGTAAAAGCAAAA            CGGCGACC TCAG GGTCGCCG             TTTTTGTATTTGCCC 100 34
        glpE  361609 ..  361625 +  -2.9  -4.54047   GCACGCGGGCATTTA              GGGTATA TAC TGTCCCC              TTTTGTGTGGAATAA  65 25
APT61_RS01660 NONE
APT61_RS01665  363256 ..  363266 +  -3.2  -3.23274   TTGCAGTTAGAGCTG                 TGCT GAT GGCA                 TTGCCTTATGGCGCG  46 20
APT61_RS01675 NONE
        malQ  371774 ..  371789 + -11.8   -5.4505   GAAGTAATAAAAAAA              CCCGCC GGAT GGCGGG               TTTTTTATTGCCGGG 100 34
APT61_RS01700  375613 ..  375641 +  -7.5  -3.31322   GGAAAAAGTGACATA        CCGCAACAATA CTTAATT TATCGTTGCGG        TTATCCCGCCTTCGA  62 58
APT61_RS01705  375972 ..  375991 +   -15  -3.74747   AAATAATGAGATAAA            GCCGGGCA TAGT TGCCCGGC             TTTACTGACGATTAA  95 35
        ompR NONE
        envZ  384358 ..  384389 + -12.4  -4.19624   CAGTGGGCACAAACA      TGAAAAACGGCAAC CTCG GTTGCCGTTTTGCG       TTTATCTTGGCCCTG  95 83
        nudE  391678 ..  391702 +  -2.7  -3.13522   GGTGGGGTTAATGGC          TGCTCCGGTAC GCC GTCCAGCAGCA          TCTTCATAAAGGCAT  41 248
APT61_RS01780  394975 ..  395005 +    -3  -3.28924   CAATCTTCTGCCGTG       GCGCCAACGGCAAC AGC GTCGCTGCCTGCGC       TTCTGGGGAGGGATG  47 51
APT61_RS01785 NONE
APT61_RS01790 NONE
APT61_RS01795 NONE
        hofQ  397698 ..  397726 +  -8.7  -3.66178   GGTTTCAGTTCATGT        CCTGCTACGCCAG ATA CCGGTGAAGCGGG        TTTACCATTAACGAA  71 255
        aroK NONE
        aroB  399446 ..  399467 +  -3.6  -4.42238   ACTATTAGAAAGGTC           CGGCTGCG GTAAAA CGTAGCCA            TTTTGCTTCAGGTGA  63 46
APT61_RS01815  400835 ..  400856 +  -6.6  -2.83409   AGGATGCTGTCGGAG           CTTTCTCC ACAGCC GGAGAAGG            TGTAATCAGTTAGTC  54 53
APT61_RS01820 NONE
APT61_RS01825 NONE
APT61_RS01830 NONE
APT61_RS01835  404265 ..  404279 + -11.4  -5.64274   TACCAATAAAAAAAA               CCGGGA CAT TCCCGG               TTTTTTTATGCCTGA 100 133
APT61_RS01860  411637 ..  411647 +  -2.4  -4.07246   AAGTTAACCAGTTTC                 GGCG AGG CGAC                 TTTGGTTTGCAGTGA  56 235
APT61_RS01870  413477 ..  413497 +   -14  -3.30781   CGTAATCCCTGATGA            CGCGGGCA AGCAA TGCCCGCG            TTGCCTTTACCTTCC  93 36
APT61_RS01875 NONE
APT61_RS01880 NONE
        argD  416292 ..  416311 + -12.2  -4.37711   CGCATATATAAAAAA            CGGTAACC TGGG GGTTACCG             TTTTGCGTTTAATGC  95 82
APT61_RS01900  420243 ..  420258 +  -7.5  -3.11634   AGTCCATCACCGCCT              CGCGG GAATGA CCGCG               TTCGCTGGTATCCCG  54 457
APT61_RS01920 NONE
APT61_RS01925 NONE
APT61_RS01930 NONE
APT61_RS01935 NONE
APT61_RS01940 NONE
APT61_RS01945 NONE
APT61_RS01950 NONE
APT61_RS01955  429481 ..  429526 +  -4.7  -4.29432   GACGATGGCGATCAG CT-GCTGCATCTGATACGGCTG CGC CAGCTTTAACAGCTGCACCGAG TTTTCATACACTTTC  67 126
APT61_RS01970 NONE
APT61_RS01975 NONE
APT61_RS01980 NONE
APT61_RS01985  435626 ..  435641 + -10.4  -5.50499   TTCAGGCACAAAAAA              GCGGGA TTAA TCCCGC               TTTTTTTACGTCTCA 100 51
APT61_RS01995  436939 ..  436959 + -11.1  -5.58179   GTAAATCGGTAACAA            CCGCCGC CCCTGAA GCGGCGG            TTTTTTATTATGGTG 100 37
APT61_RS02000 NONE
APT61_RS02005  438176 ..  438192 +    -3  -2.64099   CAAGCCGCATTAACC             TGCGACC GAAT GGT-GCA              ATTCTGATGAACCGC  41 2
APT61_RS02010 NONE
APT61_RS02015  438908 ..  438930 + -10.6   -4.7268   AGCCCTAAAATTTCG           CGTCCTCATA TTG TATGAGGTCG           TTTTATTACGTGTTT 100 80
APT61_RS02020 NONE
APT61_RS02025  439944 ..  439969 + -15.5  -3.81027   AGTATTAGTCACCAG         GCGGGC-GCTTC AGC GAAGCAGCCCGC         TTTGGGTTACTTAAC 100 50
        fusA  442156 ..  442180 + -16.5  -2.78935   TAAAACCTAAGTCCC          GTGCTCTCTCC AAA GGGGAGAGCAC          TATAGTAAGGAATAT 100 51
         tuf  443407 ..  443422 + -10.4   -5.5074   TCCCTGAATTAAAAA              GGACGC TTCG GCGTCC               TTTTTTGTTGCCTTG 100 48
APT61_RS02040 NONE
APT61_RS02045 NONE
        rpsJ NONE
APT61_RS02060 NONE
        rplD NONE
        rplW NONE
APT61_RS02075 NONE
APT61_RS02080 NONE
        rplV NONE
APT61_RS02090 NONE
APT61_RS02095 NONE
APT61_RS02100 NONE
APT61_RS02105  450128 ..  450153 + -12.7    -5.252   CCTTCTCGATACGAA         TAAACGGCTCA GCAA TGGGCCGTTTA          TTTTTTCTACCCATA 100 49
APT61_RS02110 NONE
        rplX NONE
APT61_RS02120 NONE
        rpsN NONE
APT61_RS02130 NONE
APT61_RS02135 NONE
APT61_RS02140  453156 ..  453166 +  -3.2  -3.32963   ATGCTGCCCGTGAAG                 CTGG CCT TCAG                 TTCTAAGGTAGAGGT  48 9
APT61_RS02145 NONE
        rpmD NONE
APT61_RS02155 NONE
        secY  455828 ..  455857 + -12.3   -4.6645   TTTCTTGCAAAGTTG       GGTTGAGCTGGCTA GAT TAGCCAGC-CAATC       TTTTGTATGTCTGTA 100 200
APT61_RS02165 NONE
APT61_RS02170  456699 ..  456711 +  -9.1  -3.75517   CCGCCGAAAAAACGT                CGCGT ATA ACGCG                TTCGTTTTCTAGGAT  74 17
APT61_RS02175  457347 ..  457365 + -10.4  -3.14132   ACACCTGATCGTCGA             GCTTTACT CCA AGTAAAGC             TTAGTACCAAAGAGA  73 10
APT61_RS02180 NONE
        rplQ  458822 ..  458835 +  -5.9  -5.76633   AGTAACGTAAAAAAA               CCCGC TTCG GTGGG                TTTTTTTATATCTGC 100 46
APT61_RS02190 NONE
        zntR  459912 ..  459958 + -20.3  -3.51411   GAAACGGGGTAACTG GGAGGCCAGTGGCAAGCAAGC AAATC GCTTTCTTACCACTGGCCTTC TTGCTTTCAGAGCCT 100 233
APT61_RS02225 NONE
APT61_RS02230  466605 ..  466641 + -16.8   -3.6968   TATCCAGACTGTGAT   TATGTCCGTCC-CCTGA AAAG TCAGGCGGACGGGCATA    TTGTTAAAGTTCTGG 100 178
APT61_RS02240  467574 ..  467618 +  -3.5  -4.77036   TCGTGATGCTTTGAC CGGCGAACGTTTTCGCC AGGGGTAATGA GATGGAAGCGTACGCCG TTTTTGGTAATCCAA  69 1
APT61_RS02245 NONE
APT61_RS02250  469131 ..  469151 +  -2.5  -5.00616   GACCACACTGCTGCT            GTCGATC AAGACGC GATCGCC            TTTTTTGGGGAAAAG  74 490
APT61_RS02260  469455 ..  469479 +  -7.1  -2.62263   AAAGCGTGAAATAAT          CGCTTGACTCT GAA AGAGGAAAGCG          TAATATACGCCACCT  56 46
APT61_RS02265  471228 ..  471241 +  -2.3  -2.72471   AAGAACCTGCCTTTG               CAGTG CTCA CACAG                ATTGTCTGATGAAAA  39 36
APT61_RS02270  471404 ..  471439 +  -9.2  -4.00532   AGTCGCCGACCCCCA    TATCTCAAAACTGACT TCAG AGTCATGTTTGAGATA     TTTGCTCTTTAAAAA  78 61
APT61_RS02275 NONE
         rrf NONE
APT61_RS02285 NONE
         rrf  474941 ..  474974 + -16.9  -2.65388   CCAGACATCAAATAA     GTGAAAAGGCCATCC GTAA GGATGGCCTTTTTGC      GTTATGCGTTCCGTA 100 35
APT61_RS02330  485848 ..  485867 +  -3.4  -3.72324   TCAGTTCGGTCAGCA            CCCGTACG CTCT CATCCGGG             TTATTCATGGCCGTC  52 402
APT61_RS02400  500589 ..  500605 +  -5.8  -2.87132   TTTTCACGTAGAATA              TCGCGC CTGTA GCGTGA              TGTATGACGAGCAAA  52 57
APT61_RS02405  501889 ..  501915 + -15.3  -2.87132   AGAGTAGTCAGGTGT         GAAAGGGTAGC GGATG GCTACCCTTTC         TCTCTGACGCGAGAG  95 34
APT61_RS02410 NONE
APT61_RS02415 NONE
APT61_RS02420 NONE
APT61_RS02425 NONE
APT61_RS02430 NONE
        tldD  511209 ..  511220 +  -5.8  -3.76224   GGTGACAAAACGCCC                CTGC GGCA GCAG                 TTTGGTGGATAACCC  58 350
APT61_RS02445  513175 ..  513185 +  -2.4  -3.24924   GTGAGTTTGGTTAAT                 CGCC ATG GGCA                 TCTTCTCCATCGCCA  43 27
APT61_RS02450  515159 ..  515177 + -11.7  -5.65177   TGATCCTCCTGAAAA             CCGACGC CGTAA GCGTCGG             TTTTTTTGTGACTAT 100 38
        gabD NONE
APT61_RS02460  517502 ..  517531 +  -5.7  -5.45652   ACGCGCTTCGATAAC       GCGATAGGAGGAGG CAC CCTGTTCCTG-CGC       TTTTTTGTTCAGCAT  93 522
APT61_RS02480  519931 ..  519948 + -12.7  -5.76633   CAGGGCAATAAAAAA             CCGGAGC AATG GCTCCGG              TTTTTTTATGTCTGC 100 57
APT61_RS02500  524400 ..  524426 +    -5  -3.64703   CTCCTCGTGGAAGAG         GGCCGGGGTG AGGGCGA CAGCCCGGAC         TTTCCCTACCCCCGG  57 53
APT61_RS02505 NONE
APT61_RS02510  525537 ..  525550 +  -9.5  -5.64274   ACAATTGGCGAAAAA               CCCGC TTCG GCGGG                TTTTTTTATGGCTAC 100 63
        sspA NONE
APT61_RS02520  526968 ..  526996 + -12.6  -5.82316   AGTTAAAGAGATAAA       TACCCAGCCTGAT ATCA ATC-GGCTGGGTA        TTTTTTTTGCATAGT 100 46
APT61_RS02525 NONE
APT61_RS02530 NONE
APT61_RS02535  531335 ..  531356 + -17.3  -3.25539   AAGTAAGCAAAAAAA           TGGCCCGGC ATTT GCCGGGCCA            TATTCATTACACTTC 100 35
APT61_RS02550  537723 ..  537760 +    -7  -2.64933   TTATTTAGTCAGTTT   CACATCCCTGTAACCT TGCTGT GGGCTTTAGGGATGTG    TGATCTGACTCACTA  56 13
APT61_RS02555  539102 ..  539112 +  -2.4  -4.13304   CTGATTTGTCACCTG                 ACGC GCC GCGC                 TTTTCGCCATGGTTT  59 106
APT61_RS02565  542353 ..  542370 +  -9.9  -4.28254   GGGGTAAAAGCAAAA             CGGTAAC AACC GTTACCG              TTTTGAATGTTACAG  83 62
APT61_RS02595 NONE
APT61_RS02600  551528 ..  551558 + -17.7  -2.97059   GTTCCTGACCCCTGA       CACCTCATCTCCC TCTTT GGGAGGTGAGGTG       TATCCTCTGTTTTAC 100 33
APT61_RS02605  554148 ..  554163 +  -2.6  -4.27192   CATGAATCAGTTAAA              T-GTGTG AAG CACACCA              TTTTAATCAGAATTT  59 185
APT61_RS02610 NONE
        mtgA  555803 ..  555826 + -10.2  -3.76482   TCAAATAACTTCATC          GCCGGGCGTG CATG CATGCCCAGC           TTATTGGTGATCTCA  75 236
APT61_RS02675 NONE
APT61_RS02680 NONE
APT61_RS02685 NONE
APT61_RS02690 NONE
APT61_RS02695  566878 ..  566902 + -12.1  -5.04356   ACGTTACTATCAAAA          GCCCCGACTGT TTC ATCGTCGGGGC          TTTTTGCTTGTTTAA 100 51
APT61_RS02700 NONE
APT61_RS02705  568599 ..  568618 +   -10  -5.31072   CTATCCCGTTTAAAG            GAGCGTCA TTAT TGGCGCTC             TTTTTGTTGTCTTCT 100 80
        rplU NONE
        rpmA  570966 ..  570987 + -15.9  -4.74103   CGGTAACGGATTAAA           GCCCCGCAA CGTG TTGCGGGGC            TTTTTACATTGGAAA 100 54
APT61_RS02730 NONE
        obgE  573202 ..  573220 + -14.6  -5.95166   TTAAGACCGTCAATG             GCCCCCTT ATC AAGGGGGC             TTTTTTTTAGTTCAA 100 37
        greA  577135 ..  577149 + -12.8   -4.4009   TAAAGATAGGAAAAA               GGCCGC ATA GCGGCC               TTTTATCAACTCAAG 100 72
        rrmJ  578341 ..  578355 +  -2.8  -3.40899   CTGAGTATCCTGACG               CTGTTT TTA ACACAG               TTGTAATAAGAGGTT  47 83
        hflB  580356 ..  580375 + -12.8  -5.39905   TCTCTTTACCTGAAA            CCCTGGGG CTTG CCCCGGGG             TTTTTCTTGTTTGCT 100 61
        folP NONE
        glmM  582616 ..  582631 + -11.8  -4.91657   TTAAGTGCTTAAAAA              GGCGGC GCTT GCCGCC               TTTGTTTTGTTCATT 100 46
        secG NONE
APT61_RS02790  583264 ..  583279 +    -9  -5.92337   ATATTCCGAAGAAAA              GACGTC GCAA GACGTC               TTTTTTTTCGTCTGT 100 41
APT61_RS02800  585279 ..  585294 + -10.4  -5.60689   TTCAGTTATCTAAAG              CCCCGA TTTA TCGGGG               TTTTTTGTTATCTGA 100 152
APT61_RS02805 NONE
        nusA NONE
        infB  590115 ..  590129 + -11.4  -5.36441   CAAGAATTATCAAAA               GGGGCT AAA AGCCCC               TTTTTTGTCTGGAGA 100 92
        rbfA NONE
        truB NONE
APT61_RS02830  591940 ..  591955 + -11.8  -5.00616   CGAGTTTCAGAAAAG              GGGGCC TTAT GGCCCC               TTTTTTCAACCAGAC 100 47
APT61_RS02835  594304 ..  594325 + -15.1  -3.78934   GTAAGGTTGCCGTTT           GCCCTCCGC GTAA GCGGGGGGC            TTGTTATCAGGCAGG 100 37
APT61_RS02840  595323 ..  595348 +  -3.2  -3.99775   CCGTAATCTTTTGAT         TGCCATCATC TTAACC GGTGAGGGCG          TTGTTGTTCGTCAAT  58 61
APT61_RS02845  597417 ..  597438 + -14.5  -5.83226   AAAGTAAAATATACA           GCCCCGATA TTGT TATCGGGGC            TTTTTTTATTCCCTT 100 59
APT61_RS02850  598970 ..  598982 +  -4.8  -3.89215   GCAGCACCGCTTCCA                GTCC ATGGC GGAC                TTTCGCTTTATCACC  59 225
APT61_RS02870 NONE
APT61_RS02875  603115 ..  603151 + -11.7  -3.75169   CAAAGGTTCCATCCC   CA-CTGACGAGGCGCT CTTTCT GGCGCTTCGTCAGCTG    TTTGATCCGGTACTC  81 74
APT61_RS02885  604271 ..  604285 +  -7.1  -2.61374   CCGCTTTGCGGAACG               CCTCG GCAGG CGAGG               TGAATTCTGAATCTT  50 460
APT61_RS02895  605581 ..  605625 +  -5.5  -3.73224   GCGCAGTTCCAGGGT GCCGTCATCTACCTGTGTGCC CAC GGAACGCGGGTCAGTCGCGGC TTTGGTGCCCACTGC  58 495
APT61_RS02920  610244 ..  610264 +  -2.4  -3.72893   ATCGCTGGCTGGCGT            GGCGGCAT AGATC AGGCCGCG            TTTGGTCGGACGCTG  51 494
APT61_RS02930 NONE
APT61_RS02935 NONE
        garR  614937 ..  614963 + -10.1  -4.74103   AGTCTCTCGCTAACA        AAGACGGGCGCG GGAA CGCGCCCG-CTA         TTTTTGCCTTAAGCG 100 28
APT61_RS02945 NONE
        rnpB  616959 ..  616973 +  -3.6  -4.36914   CACAGAAAGATTATT               TGAAAT AAA GTTTCA               TTTTCTGAAAAAGCC  63 434
APT61_RS02955 NONE
APT61_RS02960  619248 ..  619263 + -11.8  -5.04601   ACTTCTTCAACAAAA              CCCCGC TTCG GCGGGG               TTTTTGCTTTCTGAG 100 422
APT61_RS02965  620870 ..  620885 +  -3.2  -3.35639   GAATGTTAACGCATT              CGTCCA CGGC TGAACG               TTGCTTAAAAATATT  48 74
APT61_RS02970 NONE
APT61_RS02975 NONE
APT61_RS02980 NONE
APT61_RS02985  626891 ..  626909 +  -5.2  -5.80003   TAAGGTCAAAATTCT             TCCCGC GCATGTA GCGGGG             TTTTTTATTTCTTGA 100 113
APT61_RS02990 NONE
APT61_RS02995  629812 ..  629842 +   -12  -4.07568   GGCGTCCTGATATAA      CG-CTCCTCTCTC CTGACA GAGAGAGGAGACG       TTTTACACCGGCAAA  95 31
APT61_RS03005  631554 ..  631581 +    -9  -2.97012   CAGAAGTAATCTTTA        CGCCCGGCAAGCG CAG CGCC-GCCGGGCA        ATTTCTCACTCATTT  66 32
APT61_RS03065  640842 ..  640852 +  -3.2  -3.27022   TGAACTGAACTAAGG                 CCTT CTG AGGG                 TTGATATGCAATACA  48 28
APT61_RS03070  642394 ..  642414 + -18.3   -5.4833   CTTACGATAGTAAAA            GGCCCGGTC ACT GACCGGGCC            TTTTTTATTAGCTGC 100 74
APT61_RS03095  648050 ..  648067 +  -4.9  -2.56164   AGCTGGGGCGTCGTC             GGTAAGA TTGT TTTTACC              CTTCATCCTTCACCC  46 21
APT61_RS03115 NONE
APT61_RS03120 NONE
APT61_RS03125 NONE
APT61_RS03130 NONE
APT61_RS03135 NONE
APT61_RS03140  659413 ..  659438 + -12.5  -2.92817   TTTTGGACCACGTAG         GCCGGGCAAGCG CAG CGCC-GCCCGGC         GTCTTTTATGCTTCT  81 84
APT61_RS03150  662795 ..  662822 +  -8.4  -5.80003   TAACGTTCCAGAAAA        GCCGTTTGCTTC CGCC GGAGTGAGCGGC         TTTTTTATTTGTTAA 100 46
APT61_RS03155  664792 ..  664808 +  -6.5  -4.57569   TGAAGTTATCCAGCG              CCCGC TTCATCT GCGGG              TTTTTACGCAGCTGG  78 147
APT61_RS03165  666324 ..  666349 +  -8.9  -4.59773   TCCATATTGCTCAGC         GAGGAGACCAG CAGC CAGGACTCCTC          TTTTTCCAGCTCCGC  86 135
APT61_RS03175  668215 ..  668242 +  -4.2  -4.29325   CGAGAGGGGGAAAGG        GGGATGA-TGGTT AGT AACCACTCACTCC        TTTTGCGTGTTCCTA  62 315
APT61_RS03180 NONE
APT61_RS03185  669763 ..  669775 +  -3.3  -2.91395   GCCGTGCACGCCAAT                CTGAG AAC CTCCG                GTTTCTGACGACAAT  43 5
APT61_RS03190 NONE
APT61_RS03195 NONE
APT61_RS03200 NONE
APT61_RS03205 NONE
APT61_RS03210  679774 ..  679803 +  -7.9  -5.07011   TCGGGATTCTGGAAA       GCGCC-TCGCAA GACTGAA TTGCGGTGGCGC       TTTTTGCTTTCTGTG  90 58
APT61_RS03220  682548 ..  682564 + -10.9   -3.1462   TGTAAATTTTAAGAA              GGGCATT TTA AATGCCC              TGATTTTAATCGATT  76 41
APT61_RS03240  685115 ..  685136 +  -2.4  -3.72678   TGCAGGCCTGATAGT           TCCATTTTG GGATA CAAAA-GGA           TTTCCATCATGTTTG  50 30
APT61_RS03245  685647 ..  685659 +  -4.1  -2.75992   GCGCTTCGTTCGGCA                TCATC TGA GGTGA                TCATGTTGACTAAAG  45 18
APT61_RS03250  686193 ..  686203 +  -2.4  -3.83561   AAATTAATGGCGTAA                 ACCC GCC GGGC                 ATTTTTTTGCCCAAA  52 51
APT61_RS03255 NONE
APT61_RS03260 NONE
APT61_RS03265 NONE
APT61_RS03270  690028 ..  690058 +  -4.8  -3.65696   GAAATCGGTACTATA       CTGTATGTATAAAC AGT GGATATATATACAG       TTAATTTGTGTAAGT  57 117
APT61_RS03275 NONE
APT61_RS03280 NONE
APT61_RS03285  690922 ..  690941 +   -15  -4.53636   ATCGTTTTGACGCAG            GCCCGCCA GTTC TGGCGGGC             TTTTGCTTGTGTCAT 100 95
APT61_RS03290  692735 ..  692753 + -13.2  -5.73563   GTATTTGTGATTTTA             GAGGGGTA ATT TACCCCTC             TTTTTTTAATTTAAT 100 31
APT61_RS03305 NONE
APT61_RS03310 NONE
APT61_RS03315 NONE
APT61_RS03320  698795 ..  698811 +  -2.1  -3.54653   AGTGCAGGATGCACC              GCACTGC ACG GTGGAGC              TTATCTGATGAAAGT  47 1
APT61_RS03325 NONE
APT61_RS03330 NONE
APT61_RS03335 NONE
APT61_RS03340 NONE
APT61_RS03345  700575 ..  700587 +  -6.2  -2.78596   GGATGAAACGGAGGC                CGCC TGGGC GGCG                TGTGCTGACAAAGTG  52 62
APT61_RS03350 NONE
APT61_RS03355  701932 ..  701948 +  -2.9  -3.80018   TTGTCTTTGAATGCT              CGCGTTA TAA TAGCGCA              TTCTTCATCTGTAGG  55 453
APT61_RS03365  703168 ..  703196 +  -2.9  -2.99471   AAGTTATGAAAGGCG        GCGATACCTCGGG AGG CCCGGTATGACGC        TGTATATCGGCATGA  43 0
APT61_RS03370 NONE
APT61_RS03375 NONE
APT61_RS03380 NONE
APT61_RS03385 NONE
APT61_RS03390  708328 ..  708347 +  -9.2  -5.82316   AAACCGCTGTGACAA            AAGGCCGC TTAT GCGGCCTC             TTTTTTTTGCCTCCT 100 29
APT61_RS03395  709701 ..  709711 +  -2.4  -2.64155   CCGGGTCAGCGCGTA                 AGGG GAC CCCA                 TGGCTTTACCACGCA  39 25
APT61_RS03400 NONE
APT61_RS03405  710596 ..  710616 + -11.9  -4.65895   TGACGGTTGACGATC            TGGTGGCAG ATA TTGCCACCA            TTTTTCACTGGCCGC 100 38
APT61_RS03410 NONE
APT61_RS03415 NONE
APT61_RS03420 NONE
APT61_RS03425  715657 ..  715670 +  -9.5  -5.14965   AGCTTTTGAGAGAAA               CCCGC TACG GCGGG                TTTTTTAATGGCACT 100 319
APT61_RS03435  716811 ..  716826 + -10.4  -5.15969   AGAAGAAACAAAAAA              GCTCCC CGAA GGGAGC               TTTTTTACGTTCGGG 100 345
APT61_RS03455  722222 ..  722255 +  -5.3  -4.18018   GCCTGATGGAAGAAA     CCCGGATGTTAAA GCGCCATA TCAAACATCCGGG      TTTTCGCTAACAGAC  66 35
        folB  732117 ..  732138 +  -9.5  -5.82281   CAGCTGTTCCTTCTG           C-GGTTACCC CTT GGGTAACCCG           TTTTTTTCTGTCTTT 100 81
APT61_RS03520  732988 ..  733021 + -15.3  -3.55946   TGGTCTTCTTCTGAC     GGGTTGCCCTCAGTC TTTT GGCTGGGGGCAACGC      TGTTCTTTCCAGTCG 100 27
APT61_RS03535 NONE
APT61_RS03540 NONE
APT61_RS03545  740873 ..  740890 + -11.3  -4.29845   CGCAAACAGTAAAAA             CGGCAAC CCAG GTTGCCG              TTTTGCATTCACTTC  87 90
        ribB  742283 ..  742299 + -15.1  -5.08824   GCTGAAATGAAAAAA              GCCGGGC AAT GCCCGGC              TTTTTTACGTCACGC 100 46
APT61_RS03585  749796 ..  749806 +  -6.8  -4.21194   CTTCTACCGCTTCCA                 CGGT GTT ACCG                 TTTTCGATAATCGAC  71 332
        nudF NONE
APT61_RS03610 NONE
APT61_RS03615  755153 ..  755167 +  -2.8   -2.9039   CGCCCGGATACGGCG               TCAGAA GGC TACTGA               TGTCTGCGCTCCTCT  42 11
APT61_RS03620 NONE
APT61_RS03625  757697 ..  757712 +    -9  -5.32699   AGGTAAAAGCAAAAA              GGCAAC CCAG GTTGCC               TTTTTTAATGTTTGC 100 53
APT61_RS03635 NONE
APT61_RS03640 NONE
APT61_RS03645  763543 ..  763576 +  -8.7  -4.24204   AGCGACGGACCGTCG     GTTTGCCACTCCCCG GCGA CGGGGAGTGGGCCGC      TTTTCCATATCAATG  78 498
APT61_RS03680  767874 ..  767893 + -16.4  -5.04597   TAAATAACCCACAAA            GGGGCCGC CAGC GCGGCCCC             TTTTTCTCTGTGACT 100 34
APT61_RS03685 NONE
APT61_RS03690  771184 ..  771206 +    -2  -3.76176   GGGTTTAAGCCGGTT          TGCAGGGAA AACGAC TTCCC-GCG           TTGTTAGTACGTTTA  50 33
APT61_RS03695  772911 ..  772932 +  -6.5  -3.91897   TCGCTCCTCTGGGGA           GAGGGAACT GCTC GGTGCCCTC            TTTCTCCCTCGCCCC  66 288
APT61_RS03700  775337 ..  775364 +   -12  -5.82172   CATAACGATACTAAG        GCCGGGTA-AGGC GAA GCCGCTACCCGGC        TTTTTTTGTCTTCCT 100 81
APT61_RS03705  775832 ..  775856 + -14.3  -3.57561   GCTTATAGATTAAAA          CGAGCCCGG CGGAAGA CCGGGCTCG          TTTGAGGCATTACCC  93 33
APT61_RS03720  779071 ..  779117 + -10.3  -3.12351   GAGGGTGCGGGCTAT TGTCGTCACC-CTGACCCTCTCT GAA AGAGAGGG-CAGAGGTGAAGAGG TTCGCTGTCAGGCGC  73 42
APT61_RS03735 NONE
APT61_RS03740 NONE
APT61_RS03745  782539 ..  782554 +    -9  -5.67967   AATAAAAGCAAAAAG              GGCAAC GTAA GTTGCC               TTTTTTTATGGTCAT 100 36
APT61_RS03765  785152 ..  785162 +  -6.8  -2.78816   GTTGCAAACACTTTG                 TCGC GTT GCGA                 TATACTGCACGCTGG  54 59
APT61_RS03770  786015 ..  786045 +  -6.7  -3.09671   ATGGTTTGACCGCGC       GCCTGCGCCATCT CGTTC AGTAAGCGCAGGC       TATTGAGGTTAGCCT  52 352
APT61_RS03780  788183 ..  788201 +  -3.7    -2.914   GCAAAGGTCACTTCC             CGGTCGG AGAAG CCGTTCG             CTTTGGTCTGATCCC  44 397
APT61_RS03790  792531 ..  792555 + -10.8  -4.28774   ACGTCGCTGATCAAT          TGGGTCACCT GTGAA AGGTGACCTA          TTTTCACTTCGCTGG  85 56
APT61_RS03805 NONE
APT61_RS03810  796316 ..  796331 +  -4.6  -3.86995   GCTGGCGACATCCTT              CGCCCA GCGC TGGACG               TTCTTATAGCTTTCG  59 241
APT61_RS03820  798901 ..  798922 + -13.7  -4.05033   CAAAAATAAGCTGTC           GCCCCGGTC AACC GATCGGGGC            TTTGTGTGGGGTAAG 100 32
APT61_RS03825 NONE
APT61_RS03830 NONE
APT61_RS03835 NONE
APT61_RS03840 NONE
APT61_RS03855 NONE
APT61_RS03860  808251 ..  808267 +  -7.2   -3.6608   GGGCGTATGAAGGGT              GCCGTC CGGCA GGCGGC              TTTGCGTCCACTCGT  67 31
APT61_RS03870  811320 ..  811344 +  -7.1  -2.62263   AAAGCGTGAAATAAT          CGCTTGACTCT GAA AGAGGAAAGCG          TAATATACGCCACCT  56 264
APT61_RS03875  813127 ..  813158 +  -9.6  -4.49756   CTGATGAATGATGAA      CTTCTGAATGTACT TTTG AGTGCATTAAGAAG       TTTTGCTCTTTAAAA  91 70
APT61_RS03880 NONE
         rrf  816422 ..  816443 + -15.9  -5.34555   GCATCAAATCGGAAA           CCCCGTACC GCAA GGTACGGGG            TTTTTTGTCGTCTGC 100 39
APT61_RS03890  817298 ..  817322 +   -13  -2.78725   AGGCATAATCTCAAT          GCTCCCTTAT CATTA ATAAGGGAGC          TCCTTCATACAGTGT  81 33
APT61_RS03895  818370 ..  818385 + -10.4  -4.88736   CCAGAAAGCAAAAAA              CCAGCC CTAA GGCTGG               TTTTTCTAAATAGTA 100 216
APT61_RS03910  822257 ..  822280 +  -2.2  -2.93708   GAACATACCCTGGGC          GCTGGCGCGG ATTT CCGGGCGAAC           CTCTTTTTCCACAAA  40 304
        trmB NONE
APT61_RS03940  827278 ..  827299 + -11.5  -4.52589   ACTAATAGAACATAA           GGGGCCAGC AATT GCTGGCCCG            TTTTGTATAAGGGAG 100 36
APT61_RS03945  828065 ..  828096 +  -9.4  -3.72695   TCTGGACCCCTCACC      CT-AACCCTCTCCCC AAA GGGGAGAGGGAACAG      TTTGCTGCCCGAGGT  74 51
APT61_RS03980  833334 ..  833356 +  -3.3  -3.62644   GCACGGGCAATTTAC           GGCAGAGAA TGATT TTCACGGCC           TTGTATCCTTCTGCG  53 42
APT61_RS03985  834471 ..  834518 +  -7.7  -3.13504   GCGCTTTCAACGCCG TCAGCG-GGCGAGCGGTGCCGGTG ATG CGCTGGC-C-GATCGCCACGCCGA TACTTTTGGTGCCGA  57 390
APT61_RS04030  844113 ..  844147 + -15.8  -5.92337   CACTATTCGAATCAA     TCCCTTCCTCGTCG GGTTTAA CGACGCGGAAGGGA     TTTTTTTTCATCTAT 100 204
APT61_RS04035  845372 ..  845386 +  -2.8  -4.57073   CTGACGCTGGGAGAA               CTGG GAGTTGA CCAG               TTTTTCACCGAGATC  69 280
APT61_RS04045  848268 ..  848287 + -12.2  -4.68645   CGCAAACCCTAAAAA            CGGTAACC CTTT GGTTACCG             TTTTGCTTTTACCTG 100 101
        gapA  849595 ..  849609 +  -3.5  -3.12351   GGCCGCACAAGGTTT               CAGGT AAGAC GCCTG               TTGCGTCTGCAAAAC  46 19
APT61_RS04055  850822 ..  850843 + -10.1  -4.13304   AGAAGTAAGCCATTT           TAGGGCAGG GAAA CCTGCCCAA            TTTTCAGCGTGCTTT  85 33
APT61_RS04060  852009 ..  852027 + -13.1  -5.68039   TAACAGCCTCAAAAA             GCCCGCG TTAAT CGCGGGC             TTTTTTTATGCCTTT 100 51
APT61_RS04065  853041 ..  853065 + -17.1  -2.83788   AACGTTTCTCCGTTA          CCCGGCGCGCG CAA TGCGTGCCGGG          CTTATTAGCTTCACT 100 39
APT61_RS04070  853850 ..  853869 +  -4.2  -3.02511   TAAGCTTGCTGGCAT            GCGCCC-TG TTA CATGGGCAC            TCTTCGCAACATGGA  47 74
APT61_RS04075  854756 ..  854782 + -12.3  -5.52023   TAAGCACAAATACAG        GCCGGGTTCGCG TTAA TGCG-ACCCGGC         TTTTTTATTAATCCT 100 171
APT61_RS04085  856494 ..  856522 +  -5.1  -5.40072   ACCATCGTGAAATGA        TCTGACGGGGGGA GCC TCCCCCCGCTAAC        TTTTTTTGCAACAGC  87 26
APT61_RS04090  858051 ..  858078 +  -9.9  -5.02074   CTGCGGATCTTACTG       GCCGGGTAAGGCG GAGT CGCC--ACCCGGC        TTTTTTCACCACTGC 100 83
APT61_RS04110 NONE
APT61_RS04115 NONE
APT61_RS04120 NONE
APT61_RS04125  863931 ..  863956 + -19.1   -3.5013   CCCCGTCACACTTTA         TTCTCCCGGCC TGTG GGCCGGGAGAA          TTCCTTCGTTTGAAA 100 226
        gcvT NONE
APT61_RS04140  865870 ..  865914 +    -8  -2.52464   TCTCCCCTGTGGGGA GAGGG-TAGGGTGAAGG GAACAGACGACA CCTTCACCCCAGCCCTC TCCCTTAGGGAGAGG  57 51
APT61_RS04145  868874 ..  868901 +  -9.9  -6.02919   AAGGTATTGATGTAG       GCCGGGTAAGGCG AAGC CGCC--ACCCGGC        TTTTTTTCTTTCTGG 100 56
APT61_RS04150  869989 ..  870000 +  -4.4  -3.21747   CGCAGGTAGTCGATA                CGAT AGTC ATCG                 TTGATGCTGCCGTCC  49 345
APT61_RS04165  872367 ..  872380 +  -2.5  -3.57406   TTTATGTTATTGATT               TTAAA TGCG TTTAA                TGTTTATCGTGAACA  47 12
APT61_RS04170  873279 ..  873298 + -12.2  -4.69549   CGCAAACATTAAAAA            CGGTAACC CTGG GGTTACCG             TTTTGCTTTTACCTT 100 99
APT61_RS04180 NONE
APT61_RS04185  875660 ..  875674 +  -8.6  -3.11687   TGGGATGCCCAGAAT               CAGTAC GTC GTACTG               TTCCATCATCGTTGG  60 405
        xerD NONE
APT61_RS04200 NONE
APT61_RS04205  879306 ..  879332 +  -4.5  -3.30903   TTCCGCTATAAAAAA        GGGCGTGAAT CCGGTACA ATTC-CGCCC         TTATAACCGCATTTT  52 49
APT61_RS04210  880454 ..  880465 +  -2.2  -2.57132   ATTTATCGAAGCAAG                TCTG AAAG CAGG                 GTTATGAGGAACCAA  39 7
        lysS  882017 ..  882041 + -12.8   -5.5604   CACAGCTACCAGAAA          GCCCCGGCGT TAATC GCGTCGGGGC          TTTTTTATTGCTTCG 100 43
APT61_RS04225  883587 ..  883610 +  -3.8  -3.09516   AAGGTCTATAATGCT          TTACGCACCTC AAA GCGG-GCGTAG          TTCAATGGTAGAACG  47 92
APT61_RS04230  883756 ..  883766 +  -5.4  -3.01712   ACGAAATAGAGCACA                 CAGA CGA TCTG                 TATTACCCGAAAACC  48 106
APT61_RS04240 NONE
APT61_RS04245  884933 ..  884951 +    -3  -2.70452   CCCCCATCACCGACA             CGGCCC GATTGAA GGCCCG             GCTTTTCTTTACGCC  40 296
APT61_RS04260  887495 ..  887508 +  -2.3   -4.3129   AAGGCGGATCCCGTG               TGACG AATA CGACA                TTTTCCTGATCGGTA  61 23
APT61_RS04265  888083 ..  888119 +    -5  -2.60901   TTAACCCAGTACTGG    AAAACCCCGCCCTTCA GCCTG TGAAGGGCGGGATAGC    ATTACTTGCCGGTAT  46 2
APT61_RS04280  891532 ..  891555 + -11.1  -4.55295   ATATATCAACCCCAA          TAAGCCTCC CGTCGC GGAGGCTTA           TTTGTTTGTGAGCCG 100 52
APT61_RS04290  892543 ..  892560 + -12.7  -5.76633   TATCTCCGGGATTAA             CCGGCTC GAAA GAGCCGG              TTTTTTTATGTCTGC 100 51
APT61_RS04300 NONE
APT61_RS04305  895972 ..  895991 + -11.4  -5.78622   GCCCCTGCCAAAAGA            CCTCTGCC GCCG GGCGGAGG             TTTTTTTTGCCCTGA 100 46
APT61_RS04310  897743 ..  897769 + -11.5  -5.42259   AGCCTTTATTCGTAG        GCCGGGAGGGCG TAGC CGCCA-CCCGGC         TTTTTTTACACCTGC 100 87
APT61_RS04345  904992 ..  905036 +  -3.4  -3.63782   TCCCGCGCGCACCAT CG-CGCA-GATCGAGGCGGCGC TGT GCGTCTCCACCACCATGCGTCG TTTCACCTGATGTTC  52 255
APT61_RS04355  907365 ..  907377 +  -5.5  -3.08464   AAACAGGGCGCTGAA                CGGCA CCT TGTCG                TTCAGTAACTCCTGA  49 319
APT61_RS04365 NONE
APT61_RS04370  911183 ..  911197 +  -5.6  -3.06183   AACTGGCCGGGAGGA               TGCCCG GCC CGCGCA               TTAACTCACAGTACA  51 77
APT61_RS04375 NONE
APT61_RS04380  912504 ..  912518 +  -3.4  -3.86346   GAACACGTGGGTGAT               CTCCGG CGG CTGGCG               TTTATCCGCCAGTGA  55 61
APT61_RS04390 NONE
APT61_RS04395  917420 ..  917432 +  -6.9  -2.80113   GGCGGTAATACCGCG                CCGGG CTG TCCGG                TCTGATGCCCTCATC  54 33
APT61_RS04415 NONE
APT61_RS04420  924045 ..  924065 +  -3.2  -2.69433   ACATCTTTTACATCT            CGGGCG CAACCTCCC CGCTCG            CTTGTGCTATGATTC  42 98
APT61_RS04425 NONE
APT61_RS04430  925859 ..  925877 + -13.1  -5.60993   ACAATCGTGACATAA             CCGGCGC TCTCC GCGCCGG             TTTTTTTATGCCCGC 100 45
APT61_RS04435 NONE
APT61_RS04440 NONE
APT61_RS04445 NONE
APT61_RS04450 NONE
        recC  931162 ..  931184 +  -7.1  -3.27951   AAAATTGCGCAGGTT          TGGGCATTCA TTTA TGA-TGCCCA           TCTTGTCATGGACTG  62 50
APT61_RS04460 NONE
        recB  937676 ..  937693 +  -2.7  -2.79183   ATAGCTTGTTTTCTG             CAAGC CGAGAGGA GCTTG              TGTCATGACGATGCA  42 0
        recD  940004 ..  940023 +  -5.6  -3.65529   GTCGTTGATCGTGGC            GCGGCGGA TCTG TTCGGCGC             TTTCCATCACGATCT  58 511
        amiC  942441 ..  942454 +  -8.1  -4.76802   TCAGATACAAAAAAA               CACCC GGAA GGGTG                TTTATTGTTTTTAGA  85 80
        mltA  944254 ..  944275 + -12.3  -4.70659   ACGCCATGTTTTCCG           GGGTGAGGG GTAA CTCTCACCC            TTTTTACATCTGAGG 100 55
APT61_RS04505  945147 ..  945163 +  -7.9  -3.31144   GCATTCAGTCCCTGG              CTGCGCG AGG CGCTCAG              TTGTCCGCGTAAACC  59 71
APT61_RS04520  947179 ..  947198 + -10.7  -2.57423   TGCAGACAAAAAAAA            GCACCGC AATTGG GCGGTGC             TACATTAATCACTAT  72 47
APT61_RS04525  948432 ..  948448 +  -9.4  -2.52464   AGTAACACTTTCTTT              TGCGCG CAGGA CGCGCA              TAACTTCAGGACAGA  63 36
APT61_RS04530 NONE
APT61_RS04535  950437 ..  950462 +  -7.5  -4.07687   TCCGTCGAGACAATG         GTGGCCTGATGC CCG GCG-CTGGCCAC         TTTTACCGCCAGCGT  68 507
APT61_RS04565  957140 ..  957171 +  -8.2  -2.86151   CCACTGCGCGTGTGA      G-AGATCTCTTACAA AGC TTGTAAGAGATCGGC      GTTATTACTGCTTAA  62 50
APT61_RS04570  957658 ..  957683 + -17.7  -6.02919   GCTGCGAAACGAACC         GGGAGCACTGT TTTT ACAGTGCTCCC          TTTTTTTATTTCTGC 100 54
APT61_RS04575 NONE
APT61_RS04580  958826 ..  958840 +  -8.6  -3.41636   GTTTGATCCCGTCAA               CGTTCA GGA TGAACG               TTAATTGCATTCATT  66 7
APT61_RS04585  959319 ..  959351 + -12.1  -2.73542   ACATTGTTAAAATAA      GTTTCTGCCCTCC CTGTAGC GGAGGGCAAAAAC      TCGTTGCCAGTTAAC  78 26
APT61_RS04590 NONE
APT61_RS04595 NONE
        gudD  963861 ..  963884 + -13.2  -4.68724   GTGCGTTAAGTCCGG          TGCCGATTCC TGCG GGAGTCGGCA           TTTTCTCTTGCGTGA 100 32
APT61_RS04605  965449 ..  965492 +  -4.5  -4.41494   GAGCAAGGTCGTTTT TGCC-CGC-CGCCTGGC-GCAG CGC CAGCTGCCAGTCGAGGGTGGCA TTTTCATTGACCGTG  70 393
        rumA NONE
        relA  971593 ..  971604 +  -5.8  -5.60993   CGGGTAAGGCGCAGC                TGCC ACCC GGCA                 TTTTTTTATCAGGAC 100 61
        mazG  972425 ..  972440 +  -4.7  -4.24562   ATCTCTAACGGGTTT              TTGCG ATCAAG CGCAA               TTTGTGTGATTTTTT  64 33
        pyrG  974295 ..  974319 + -18.7  -4.08164   GAAAAGTTAGAACGG          CAACGCGTACC AAA GGTACGCGTTG          TTTGTCTGGAGTTTT 100 41
         eno  975683 ..  975696 +  -9.5  -6.26417   TAATCTTTAGAAAAA               CCCGC TTCG GCGGG                TTTTTTTTTATCATC 100 51
APT61_RS04645  977856 ..  977872 + -13.7  -5.86061   ATTGCTTAAAAAAAA              GCCCGGT TAA ACCGGGC              TTTTTTTTACTCGCC 100 32
        cysJ NONE
APT61_RS04660  982042 ..  982053 +  -5.8  -3.87994   TCGCCCGGTGCTCGA                TCCC GCAA GGGA                 TTTCTGGGAGTAACT  64 1
APT61_RS04665  982835 ..  982856 + -12.3  -5.08088   ACGTGTTTCTCTCTA           GCCCTTGCT GCCA GGCAAGGGC            TTTTTATTGCAAGTT 100 44
APT61_RS04675 NONE
APT61_RS04680  985133 ..  985170 +  -9.7  -2.64155   GGTCGCGGCAAAAAT   CCCGTGGGCGCGGGC AATCGCCA GCGCGCGGTCGCGGG    TCAATTTACGCACCG  60 450
APT61_RS04690 NONE
APT61_RS04695 NONE
        cysN NONE
APT61_RS04705  990416 ..  990445 + -15.1  -2.82516   CAGATCCTGAGATAG       TATCGATGGGGGG TGAT CCCCCCATTGGTA        TGTCATGGTCACAGG  95 31
APT61_RS04710  990871 ..  990889 +  -5.3  -2.98823   AAAATGTGGTACATT            TGCCCGCA ATGG TGCGG-CA             TCTCTGTAGCCCCGA  51 105
        ftsB NONE
APT61_RS04720 NONE
        ispF NONE
        truD NONE
        surE NONE
         pcm  994887 ..  994897 +  -3.2   -3.3543   AAAAGGAGAGCTCGC                 CTGA GAC TCGG                 ATTTTTCCAGGGTTA  48 22
        nlpD  996174 ..  996186 +  -3.3  -3.92075   CGGTCAGGGATCACG                GGTAG GAG CCACC                TTTATGAGTCAGAAT  55 70
APT61_RS04750  997203 ..  997222 +   -15  -5.39681   TTTTCATCCAAAAAA            GGCCCGTC TCTC GACGGGCC             TTTTTCTTTGGTTAT 100 46
APT61_RS04770 NONE
APT61_RS04805 1009953 .. 1009980 +  -6.8  -3.86897   ATGTGCAGCTCACAG        CCGTGCGGCTGC AGCA GGAGCCGCCAGG         TTTCTGCCAGCTCGC  66 426
APT61_RS04830 1017739 .. 1017759 +  -6.7  -4.20696   GGCGGCCAGCTTCGT            CCACCACCG GGG CGGCGGTGA            TTTTGCGCTTCATCA  69 87
APT61_RS04845 1020339 .. 1020361 +   -12   -4.2803   TCTTCTTGCCGAAAA           GTGGGTGGCG TGG TGCCACTCAC           TTTTAAATTACCCTG  95 48
APT61_RS04850 1020985 .. 1021004 +    -8  -2.70932   CTACAAAACACTTGA            TACTGTAT GAGC ATACAGTA             TAATTGCCCCAACAG  58 26
        recA 1022151 .. 1022169 +  -9.5  -4.78661   GGATGTAATAGACAA             GGGTCGC TTAGT GCGGCCC             TTTTGCTTTTTGACT 100 46
        recX 1022691 .. 1022712 +  -2.9  -4.47271   TATCTGGCGTAATTT           TACCGAATG AACG CATGCGGGA            TTTTACTTCCCTTTA  62 16
APT61_RS04865 1025557 .. 1025580 +  -2.4  -3.41602   TTGAGTTTGTGTATA          TCGGCTAAAC TTAC GTTTAACAGA           TTGTGATGCCGTGAC  45 123
APT61_RS04870 1025872 .. 1025885 +  -2.4  -2.54298   GCTGAAAAATCCCAG               CAGT CCAGTT ACTG                ATATTATCGCGTCTC  39 11
APT61_RS04875 NONE
APT61_RS04880 1026394 .. 1026404 +  -5.4  -3.30124   GTTCGAATCCTCCCG                 GATG CAC CATC                 TTCTCCGAGATAGCA  54 17
APT61_RS04885 1026667 .. 1026677 +  -5.4  -4.67563   GTTCGAATCCTCCCG                 GATG CAC CATC                 TTTTACTTTGTGTTG  75 17
APT61_RS04890 1026941 .. 1026951 +  -5.4  -4.67563   CGAGTAATCCTCCCG                 GATG CAC CATC                 TTTTACTTTGTGTTG  75 149
APT61_RS04895 1027215 .. 1027225 +  -5.4  -3.79396   CGAGTAATCCTCCCG                 GATG CAC CATC                 TTCTTCCTCATTGTT  61 149
APT61_RS04900 1027894 .. 1027910 +  -3.7  -2.57026   GGACGCAGTGGACGT              TCGCTTA CTG TGAGTGA              CTTGCTGTCACTGTC  42 13
APT61_RS04905 NONE
APT61_RS04910 1030048 .. 1030063 +  -3.3  -5.60993   TAGTCAGACTCGCGT              TGAAC AGAAGA GTTCA               TTTTTTTATAAAAAA  89 126
APT61_RS04915 1030652 .. 1030671 + -12.2  -5.45802   GCGAGCATAAAAAAA            CGGATCTG CATG CAGATCCG             TTTTTGTTTTCAGGC 100 63
APT61_RS04985 1046234 .. 1046254 +  -2.5  -2.52606   CGTCAAAAATGACTA            TCACCAG AGGAAAC CAGGTGA            ATCGTTTTGTAATTG  39 85
APT61_RS04990 NONE
APT61_RS04995 NONE
        hycD NONE
        hycE NONE
APT61_RS05010 NONE
APT61_RS05015 NONE
APT61_RS05020 NONE
        hycI 1053543 .. 1053564 +  -6.5  -5.67063   GGGGTTTTTAGGAAA           GGGTTCGCG GAGA TGCGGACTC            TTTTTTTGTGCTGGG 100 55
APT61_RS05030 1054195 .. 1054206 +    -3  -2.92463   ATTAACATATTTTTA                TGAT AAAG ATCA                 TATATACCTAATAAA  43 115
APT61_RS05035 1056043 .. 1056060 +  -2.1  -5.03145   ATCTCCATTATTATT             TATTATG ATTT TATAATA              TTTTTTGAAACGTTA  73 154
APT61_RS05045 1058578 .. 1058595 +  -5.5  -3.30124   GCCCAAACCCATCCA             GGGGC CAACCACC GCCCC              TTATCAAACCTGAAA  54 149
APT61_RS05055 1060180 .. 1060202 +  -6.2  -4.31549   TGGACACACTTTCCT           CGCAGATGCT GTA AGCCTCTGCC           TTCTTTTCACTTTTA  72 12
APT61_RS05060 NONE
APT61_RS05065 1064588 .. 1064602 +  -2.1  -5.10461   ATTTGGACAGGCGGT              GATCGC TGCC GCG-TC               TTTTTCTTAAATCGG  73 1
APT61_RS05070 1065628 .. 1065649 +  -5.1  -3.23395   CTTCAAAGGTTACGA           CGCGCTGGTG GTT CGCTAG-GCG           TTACTCGTCATCGCT  52 7
APT61_RS05075 NONE
APT61_RS05080 1067981 .. 1067998 +  -9.1  -6.07969   CCAGACCCTGCAAAA             GCAGCCT TTCG GGGCTGC              TTTTTTTTGCTTTTG 100 43
APT61_RS05085 1068701 .. 1068715 +  -8.5   -5.4833   CTGATAAAAAATAAA               CCCGC CCTGA GCGGG               TTTTTTATTGCCTGA 100 107
APT61_RS05120 1074326 .. 1074351 + -11.2  -2.56046   GACTCGCAATAATGA         C-GCGACTGGC TTTTC GCCAGTCGCCG         TGCCTTACGCTTTGA  72 29
APT61_RS05130 1075843 .. 1075874 +  -9.4  -3.24232   CTGATTTAATCCGTA      C-CAACCGGGCGG ATTAACG CCGCCCGGTCGCG      TCTGTTTAGCAGACG  67 32
APT61_RS05145 1078351 .. 1078368 +    -4  -3.05522   TTTCCATCATGCCTT             CGGGCC TGATGT GGCCCC              CTTTTGCCCGCATTC  47 85
APT61_RS05150 NONE
APT61_RS05155 NONE
APT61_RS05160 NONE
APT61_RS05165 1083977 .. 1083997 + -11.8  -2.98223   ATTGTGGCTTAACCC            CGGCGGGC TTCCT GCCCGCTG            TGTGTGGTGTGACTC  78 29
APT61_RS05170 1085614 .. 1085628 + -11.4  -2.53876   CACGGTCAGCCCCCA               CTCCCC TTT GGGGAG               TGCGTTGGGGTGAGG  75 62
APT61_RS05180 NONE
APT61_RS05185 NONE
APT61_RS05190 NONE
APT61_RS05195 1091580 .. 1091600 +  -3.1  -3.05463   AAAGCCGGGGAAAAA            GCCGTCGTA GGC TTCGGCGGA            TTCGGTAAGCACCGT  43 168
APT61_RS05205 1093156 .. 1093167 +  -5.8  -3.14344   ATCGTCGCCCAAATC                GGCA GTGG TGCC                 TTCGTAACCGACGTG  49 89
APT61_RS05320 NONE
APT61_RS05325 NONE
APT61_RS05330 NONE
APT61_RS05335 1117201 .. 1117241 + -12.5  -3.27565   TGGGGAGAGGGTTGG  GGTGAGGGGAACAGGCGAC TCA GGTGGCGGTTCCCTTCACC  TTACGTTCTGTACTT  85 151
APT61_RS05370 1123449 .. 1123463 +  -3.4  -4.32034   GGGATGAGGACGACC               CGCGTC ACC GGCACG               TTTTCCTGATGATAA  64 386
APT61_RS05390 NONE
APT61_RS05395 NONE
APT61_RS05400 1127488 .. 1127511 +  -3.8  -3.04322   GCATCAGGCCGCACT          GAAT-CGCCGT GCG GCGGCGAACTC          TCTTCGCACGTTCAC  47 86
APT61_RS05405 1128441 .. 1128453 +  -4.1  -4.47328   AGGCGCTGTTCAAAA                TTGCT CCC GGCAA                TTTTGTCCTCAGCTT  65 343
APT61_RS05440 1155880 .. 1155897 +  -2.6  -5.94597   GAACTGGATCGCGTT             CTGCGT ATTTCG ACGCCG              TTTTTTTTCGTCTTG  93 58
APT61_RS05445 1156899 .. 1156915 +  -4.3  -2.78384   GATGCCGGACATATC              CGGCATC ACT GAAGCTG              TATCCTACAAAAACA  45 51
APT61_RS05450 NONE
APT61_RS05455 NONE
APT61_RS05460 NONE
APT61_RS05465 1160515 .. 1160533 + -12.4  -3.22448   AGGGCTAATAACAAC             GCCCGCAT TAT GTGCGGGC             TTGCTGGCTGTTAAT  82 40
APT61_RS05480 NONE
APT61_RS05485 1163841 .. 1163855 + -12.8  -3.58037   TGCAGATACAAAAAA               GCCCGC ATA GCGGGC               TTTCAGGACTTCGTA  89 78
APT61_RS05500 NONE
APT61_RS05505 NONE
APT61_RS05510 1171345 .. 1171380 + -14.9  -2.69471   GCGATTGTGTAGAGT    CTGATGGTCCGTTTT GAGCGA GAAGCGGACCATCAG     CTTATATCAGCATAA  90 399
APT61_RS05540 NONE
APT61_RS05545 1179951 .. 1179967 + -12.3  -5.24799   GAGAGAAACAAAAAA              GGTGCTC ATT GAGCACC              TTTTTGTATTTCTGA 100 86
APT61_RS05565 1183885 .. 1183899 +  -7.1  -2.73124   CAGTTTACTCCGCGA               CGCTC TCCCT GAGCG               GTTTCACCGGTAACA  56 90
APT61_RS05580 1187759 .. 1187790 +   -18  -4.63218   GGGCTTTTAATATGA      CACCGGGCTCCTTC CCTC GATGGGGCCCGGTG       TTTTATTCACACAAG 100 286
APT61_RS05585 NONE
        rimM NONE
        trmD NONE
APT61_RS05600 1189830 .. 1189851 + -11.5  -5.64274   GACATCCTGTAAAAA           GGGCTGGCC GAAA GGCTGGCCC            TTTTTTTATCCATCA 100 54
APT61_RS05605 NONE
APT61_RS05610 1191776 .. 1191789 +  -5.9  -4.07568   GCGTGCTGATTACGA               TCGCC ACAC GGCGG                TTTTCGGCACGCCCC  66 50
APT61_RS05630 1195789 .. 1195799 +  -4.6  -2.53392   TTTGAACGGCCAGCT                 GGCG ACG CGTC                 TGGCTTAAGAGGTTT  46 7
        tyrA 1196962 .. 1196976 + -11.4  -5.46698   ATGTATATACTGAAA               GCCAGC ACT GCTGGC               TTTTTTCATTTTGGG 100 48
APT61_RS05640 1198123 .. 1198137 +  -3.5  -4.07687   CCTGCTGTCCGGTCG               CCATC AGCAG GGTGG               TTTTGGCCGGGACCT  58 276
        rluD NONE
APT61_RS05665 1202506 .. 1202517 +  -3.6  -5.09259   AGAATCAAGACGATC                CGGT ACGC GCCG                 TTTTCTTTTCGCATA  75 46
APT61_RS05670 1205200 .. 1205229 + -18.1  -3.53012   GTAAGTCACAAAAAG       CAAAAACGAGCCT CCAG AGGCTCGTTTTTG        TTTAAAAACCAGGCA 100 37
APT61_RS05680 1207235 .. 1207251 +  -6.5  -2.55847   GACGGCTGCGAAGTC              GTGACAC ATC GTGTCCC              CTTCGTCTAGCGGTT  52 91
APT61_RS05685 1207357 .. 1207404 +    -8  -4.00532   GGCACAACCAATCAG TATCTCAAAGCTGATTAACTAT GAAA ATAGTGAGTCATGTTTGAGATA TTTGCTCTTTAAAAA  73 61
APT61_RS05690 NONE
         rrf 1210666 .. 1210687 + -15.9  -5.24449   GCATCAAATCAGGAA           CCCCGTACC GCAA GGTACGGGG            TTTTTTGCATTTCTC 100 39
APT61_RS05700 1211215 .. 1211247 +    -2  -4.62168   GCGCATCAAAAAAAG     TG-GGGCTGATG-ATG CCT CACGCTTCAGCCCGCA     TTTTATGATTTACCT  63 17
APT61_RS05705 1212776 .. 1212788 +  -7.7  -2.75064   GCTCCCCGCCGGGCG                GCTGT CCC ACAGC                TCCTTCGATGCCCCA  54 118
APT61_RS05735 1219746 .. 1219772 + -15.1  -2.54325   CGGGTAAGGCGAAGC         CGCCACCCGGC AATAG GCCCGGTGGCG         CTATGTTTACCGGGC  95 62
APT61_RS05745 1221227 .. 1221245 + -13.1  -5.48303   GAATAGATACAAAAA             CGCCGGG TTAAC CCCGGCG             TTTTTTTACGCTTAT 100 52
APT61_RS05755 1223775 .. 1223829 +  -7.9   -2.5632   CATCCGGGTTTTCCA CGCG-GCTTTCATCCCAGGCGGGCAGA TTT TCTGCCTGACGGGCAT-AAGGCATGCG CTTGGTAATATCTTC  53 351
APT61_RS05765 NONE
APT61_RS05770 NONE
        rseB NONE
APT61_RS05780 1228150 .. 1228169 +   -15  -4.27211   ATGCTCTCTTCTGAA            GCCCGGTG ATGT CACCGGGC             TTTGCTTTATTTACA 100 17
APT61_RS05785 1230159 .. 1230171 +  -3.4  -3.62572   CCTTTAAGGAGTTGG                CATG GCGAA CATG                TTTGCCCTGATCCTG  53 42
APT61_RS05790 1231279 .. 1231325 + -14.5  -2.60776   GCTGATTCAGTGCCA CGGCACACGAAACCGCGTTGG CTTTT TCAGGACGGTTTCGTGTGCTG CATTTTTGACGCATT  90 170
         rnc NONE
APT61_RS05800 NONE
        recO NONE
APT61_RS05810 NONE
        acpS 1235496 .. 1235508 +  -6.9  -3.03441   GGAGATCGCCGCGCT                GCGGG TGG CCTGC                TCTTCGGCAATAGTG  54 474
        murQ NONE
APT61_RS05835 NONE
APT61_RS05840 1239241 .. 1239263 +  -9.8  -4.11394   GTGTGATTATGCATA           GCGGGTGTGT ATA ATGCGCCCGC           TTTTCAGACTGGAGT  81 43
APT61_RS05850 1245385 .. 1245402 + -11.3   -5.4659   GGGTTAAGTCCAGAA             CGGCAAC TTCG GTTGCCG              TTTTTGTTTGTCTTC 100 34
APT61_RS05855 NONE
APT61_RS05860 NONE
APT61_RS05865 NONE
APT61_RS05870 1249977 .. 1249994 + -12.7  -4.27316   GCCAGGCAAAAAAAA             GCCCCTC TTCG GAGGGGC              TTTTGCATTACAGCA 100 108
APT61_RS05880 1252772 .. 1252787 + -11.8  -5.64274   GCCCCGCAGAATAAA              GGCCGC GTAT GCGGCC               TTTTTTTATGGCTAA 100 45
APT61_RS05890 1254854 .. 1254876 +  -9.1  -2.82623   AGGGTGTAACCACCA          GGGCGGCCTC GCGC GGGGC-GCCC           TCCTTCTGGAAGGAC  58 138
APT61_RS05900 NONE
APT61_RS05905 1258105 .. 1258125 +  -4.7  -2.51871   ACGGAAGTCAGCGCA            CTCGGTAAA CAG TTTGCCCAG            AATTTTCATGTAAGC  43 396
APT61_RS05915 1259526 .. 1259540 +  -3.4  -3.54424   GGCGCTGCGTTTGTT               CGGGCC AAC GGATCG               TTTGACCGGGTAAGC  50 55
APT61_RS05920 1260317 .. 1260333 + -10.8  -2.81464   ATTTCAGAATCAGGC              CGGGGC ATCGC GCCCCG              TGTACTCGGTCGTAC  74 120
APT61_RS05925 NONE
APT61_RS05930 NONE
        iscA 1262382 .. 1262419 + -17.1  -3.74693   AATTGCGTATCACCT   GCTAACCCCAC-CGCAGC CAG GCTGTGTGTGGGGTTTGC   TTTAATCAGCTAACC 100 39
        hscB NONE
        hscA NONE
APT61_RS05950 NONE
APT61_RS05955 1265568 .. 1265589 + -11.5  -3.78953   TGGAAAGAGACTCTA           TGGGCTGCC TTCA GGCGGCCCG            TTTGCTAATAAGGAT  85 228
APT61_RS05960 1266953 .. 1266975 +  -8.5  -3.64703   GAGGGTGTTCATATT          CCCTC-TTGC CTAT GCAAAGAGGG           TTTGGGTGAGGGGCA  71 79
APT61_RS05965 1267796 .. 1267815 + -13.6  -3.33696   TTATCTGAATCCTTC            CGGGGTGA GCAC TCACCCCG             TTGCTTCCAGCAGCA  91 33
APT61_RS05990 NONE
APT61_RS05995 1280054 .. 1280064 +  -2.6  -3.09878   TTAAAACTCGTCTTA                 TTTT AAA AAAA                 TGTTACATCCATCCA  45 70
APT61_RS06000 1280675 .. 1280714 +   -18  -4.09685   CAGACTTTGTACAAT  GCAACGCCCCGGATGAGCA GAC TGCTTA-CCGGGGCGTTTC  TTTTCAACCCTCCAC 100 104
APT61_RS06005 1282094 .. 1282114 +  -2.6  -3.32109   ACTGACAAGCCGCTT            CTGTCA ACCAAAACC TGACAG            TGTTGTGCTGTCTGA  47 187
APT61_RS06010 NONE
APT61_RS06015 1284407 .. 1284437 + -11.2  -5.03994   CTTCCTGTGTATGAT       TGAACCCTTCGGTT ATG AACCCCAGGGTTCA       TTTTTGTCTATAGAA 100 60
        hisS NONE
APT61_RS06025 NONE
APT61_RS06030 1287586 .. 1287609 + -11.7  -4.86862   TTGTAGTATACTCAA          CGGCTCCTG TTGCTT CAGGGGCCG           TTTTGATTTTTTAAA 100 50
APT61_RS06035 1289166 .. 1289182 + -10.8  -5.65177   CTGCTCTGCTGAAAA              CCCGCG CCTGT CGCGGG              TTTTTTTATGCCTGT 100 47
APT61_RS06040 1291012 .. 1291038 +   -18  -3.21099   ATATCTGCCTTTGCT         GGCCGGGGCGTG CGT TACGCTCCGGCC         TTGCTAATACAGAGG 100 40
APT61_RS06045 NONE
APT61_RS06050 1292393 .. 1292420 +  -8.5  -2.52516   CAGCCTTCGCCTTTT        TGCCAGAGTTCG ACCAG CGA-CTCTGGCG        CTTCCTGCTCGGGAA  57 50
APT61_RS06065 1295062 .. 1295072 +  -8.2  -3.79481   CGCGTTTTCTTTACC                 GGCG TCA CGCC                 TTTCACTTCGCTTTC  68 60
APT61_RS06075 1298037 .. 1298059 + -11.9  -4.94058   TCCTGATAAGTTTCC           ACGCCCGGC TATAT GCCGGGCGA           TTTTGTTTCACTTGC 100 35
        guaA 1299699 .. 1299715 + -10.8  -5.41143   CTCGTCATGATTAAA              GCCCGC AGTCA GCGGGC              TTTTTTTCGCCGGTA 100 56
APT61_RS06100 1302194 .. 1302207 +  -8.1  -3.15999   CTTTAGTCGCTGAGG               GCAGG GATG CCTGC                TTCACTCTGTGAGGC  62 35
APT61_RS06110 1304780 .. 1304795 +  -2.6  -3.14051   TCTGGTAATAATATC              TTTGAT TTAA GTCAAA               TCTTGCTCGCCCTGG  45 460
APT61_RS06120 1307338 .. 1307372 + -10.7  -3.61398   CGTCCGTGGTGAGCG    TCAGCGTC-GGCGGCG TGGT TGTCGCCTGGCGCTGG     TTGTTGAGCAGCACG  71 200
APT61_RS06145 1314437 .. 1314454 +  -8.4  -6.08563   AACCCCGCATAAAGG             CCGGAG ATCCCC CTCCGG              TTTTTTTTGTCTCTT 100 81
         upp 1315243 .. 1315261 + -10.3  -5.81412   ATAAACGAAAAAGAA             GCCGACT TTGAT AGTCGGC             TTTTTTTTGAATAAA 100 44
APT61_RS06155 1316617 .. 1316637 + -15.4    -3.494   TCATTGATCGTCTAA            CCGGGCGG CCGAT CCGCCCGG            TTCTCTCCCCGCTTG 100 34
APT61_RS06160 1317406 .. 1317430 + -11.4  -3.18602   ATCCTCAATCTGTAG         GCCCGGCGCGC ACAG GC-TGCCGGGC          TGTTCCATGTTTACT  79 26
APT61_RS06175 1320660 .. 1320677 + -11.3  -4.40173   AGCAAACACTAAAAA             CGGCAAC CCAG GTTGCCG              TTTTGCATTTATCCT  91 127
APT61_RS06190 NONE
APT61_RS06195 1323813 .. 1323831 + -11.7  -5.50723   AGCAAATAAAAAAGA             GGGCTGG TTTAT CCAGCCC             TTTTTATTTTCGTGC 100 32
APT61_RS06200 1324725 .. 1324737 +  -4.9  -3.59583   TACGATCATACTTAT                TATCA TGA TGATA                TTTCGAGGTGGTTAT  55 121
APT61_RS06205 NONE
APT61_RS06210 1327607 .. 1327618 +  -4.4  -5.10497   TTAAGGCACACCGTT                TTGC AATG GCAA                 TTTTTTCAATGACTT  77 2
APT61_RS06215 1328400 .. 1328436 + -13.7  -2.74845   GTTGAGTTTTTCTGA    GAGATAACCCTCTCCCC GCC GGGGAGAGGGTTAAGCC    ATTACTTCTTCTGGT  85 26
APT61_RS06245 1337911 .. 1337955 +  -2.1  -2.91681   ACGGACGACAACGCG GGCTTCACAGCGTAGTATG ACCAGCA TGTTTTGCGCTATGGAGCC TGTGTAACCTTGAAA  40 45
APT61_RS06250 1338535 .. 1338554 +  -2.2  -3.52162   GGGTTAATGGGTTGA            TCTTATTA TTTT TCATAAGA             TGTATTTTATATAAA  47 26
APT61_RS06255 1339710 .. 1339729 + -12.2   -5.5604   ACGATAAAAGCAAAA            CGGTAACC ACAA GGTTACCG             TTTTTTGTTGGTTCC 100 34
APT61_RS06270 1345716 .. 1345733 + -12.7   -3.9392   AATAAACTCTTTCAG             GGCAGCC TCGC GGCTGCC              TTCTTTCGGATCAAA  87 437
APT61_RS06285 NONE
APT61_RS06290 NONE
APT61_RS06295 1349223 .. 1349240 + -11.3  -6.06723   AATCGCCGCCAACCA             TGCCACG ACGA CGTGGCA              TTTTTTTTTCAGGAG 100 81
APT61_RS06300 1350199 .. 1350219 +  -6.2  -4.58466   TCCCTAAAGGGGAGA            GGGGATAA ATGCC TTATTCCC            TTTTCTGCTTCTAAA  75 64
APT61_RS06305 NONE
APT61_RS06310 NONE
        cysW NONE
APT61_RS06320 1354203 .. 1354228 + -11.1  -5.10461   CGAGCACGGACGTAG         GCCGGGTAAGCG AAG CGCC-ACCCGGC         TTTTTATTGAGTAAA 100 94
        cysM NONE
        pdxK 1356012 .. 1356029 + -12.7  -5.03994   CCTGACAAACAAAAA             TGGCGCC CGAA GGCGCCA              TTTTTCTGTGTGGCA 100 36
APT61_RS06360 1362141 .. 1362157 + -10.8  -4.99861   TTCACATCTCCTCAA              CCCCCG CATGT CGGGGG              TTTTTCTCATTAATG 100 55
        ligA NONE
APT61_RS06370 1364798 .. 1364812 +  -2.1  -4.11394   AAACGACCAGTAGAA               TCGAT GACTG ATCGG               TTTTGGCAATCCACT  59 411
APT61_RS06380 1366705 .. 1366715 +  -2.4  -4.19238   GGCAATGCTGTTATC                 GCTG GAG CCGC                 TTTTACCGTTACCGC  59 298
        gltX 1369228 .. 1369245 + -12.7  -6.22691   AACAAAAAAACAAAA             CGGCAGG TTAC CCTGCCG              TTTTTTTTATTCTTC 100 47
APT61_RS06430 NONE
APT61_RS06435 1370431 .. 1370450 + -12.8  -5.64274   CCACCAAAATTTGAA            CCCTCGCC GAAT GGCGGGGG             TTTTTTTATGCCTGC 100 35
APT61_RS06440 1372821 .. 1372863 + -15.8  -2.70932   CTCAGTGAATTACAG GCGTAAAAAAACCGGGGA GGATAAG TCCCCGGTTTGTTTATGC TGATTACAGGACCAG 100 20
APT61_RS06450 1375646 .. 1375661 + -11.8  -4.81551   TGGGATTATAAAAAA              GGCGCC GCGA GGCGCC               TTTTTCGTATCAGTG 100 30
APT61_RS06465 1378954 .. 1378969 +  -7.5  -3.08206   CATCCAGGCGCTGGA              GGCGC GTAAAA GCGCC               TGATTATTTGTCCTC  59 7
         glk 1381387 .. 1381412 + -14.8  -2.80091   GCTGTAACCCTTCCA         CCCCGGTGAA ATGCCG TTCACCGGGG          CTTCCTTTTACAGGT  90 34
APT61_RS06490 1385494 .. 1385538 + -18.1  -3.40307   CAGGCCGGGCAGTAA GTAGCAAAAAAAACAGGAGCC AGT GGCTCCTGTTTTTTTAACTGC GTTTTCTTCGCTCAG 100 26
APT61_RS06525 NONE
APT61_RS06530 NONE
APT61_RS06535 NONE
APT61_RS06540 1398576 .. 1398593 +  -2.5  -4.00868   GAGAACAAGTTCAGA             CCGGGCC GACC GGCGCGA              TTTCCTTATCGCTGG  55 424
APT61_RS06545 1402082 .. 1402092 +  -2.4  -3.28712   GATGCAGACGCTGAT                 GCGG ATG CCGA                 TTCTGACGCCGACGC  45 134
APT61_RS06550 1405356 .. 1405394 +  -8.2  -5.36441   GGGCCTTTGAAGGCT  GACGGGGGTTATTCCGG CTGACA CCGGGACAACCCTC-TC   TTTTTTATCTGCGGC 100 40
APT61_RS06555 NONE
APT61_RS06560 1408989 .. 1409007 + -14.6  -2.89742   AAGCGGGGATACAGA             CCACCTCC CGG GGAGGTGG             TCTGTAAGCATTACC  90 39
APT61_RS06590 1412855 .. 1412873 + -13.2  -5.64274   AATAAAAAAAGAAAA             GGTGAGCA CGA TGCTCACC             TTTTTTTATCACTAC 100 36
APT61_RS06600 1414883 .. 1414902 + -10.7  -4.07647   TTAATTTCCCTTCAA            CGCCTCC TCTCCC GGAGGCG             TTTCGTTTGCGCTCT  87 37
        fadI NONE
        fadJ 1418613 .. 1418625 +  -6.9  -4.43844   GGATCAGGCACAATG                CCCGG CCA TCGGG                TTTTCTACCTCGTGA  74 153
APT61_RS06615 1419344 .. 1419354 +  -2.4  -3.84246   TGGGTGTTGAGCAAG                 CCAC AAC GGGG                 TTTGCTGCTTAAGAA  53 188
APT61_RS06625 1420874 .. 1420887 +  -9.5  -3.66178   TAAAGATTAATCCAA               CGGGC TTCG GCCCG                TTTCACATTGCGCAA  76 31
APT61_RS06630 NONE
        mepA NONE
APT61_RS06640 NONE
APT61_RS06645 1424186 .. 1424202 +  -6.5  -2.66695   GATCACGGCGGAATG              CTTCCCG TGG CCGGAAG              ATCTTTAATAGAGGA  53 1
APT61_RS06650 1424541 .. 1424591 +  -3.7  -3.55622   CCGGGCAAGCGAAAG CGCCGC-CCGGCGCGCGAATGGCT CCAC AGCCAGACGCCCGGTGGCGCCACG TTTGCCGGGCTTAGG  50 61
APT61_RS06660 1428003 .. 1428019 + -13.7  -5.64274   GAATGTATAGTAGAA              GGGAGCC TCT GGCTCCC              TTTTTTTATGCCTGA 100 47
APT61_RS06665 1429586 .. 1429597 +  -3.6  -3.68827   CCTGCAGGGTATGCA                GCGT TGGC GCGC                 TTTGGGTGCTCAGTG  54 384
APT61_RS06675 1431537 .. 1431566 + -15.8  -5.72622   TAATGTCTTCTTAAT       GC-TCCCTGGCGG ATAAC CCGCCAGGGACGC       TTTTTTATTTCTGGA 100 38
APT61_RS06680 1432585 .. 1432602 +  -4.1  -2.62616   GTTGCCGAAAAACTG             GTGCAGG AGTA TCTGTAC              TGATGTCAGAAGTGG  44 5
        truA NONE
APT61_RS06690 1434115 .. 1434127 +  -3.3  -5.24531   AATAAAAGCACAACT                GCGGT TCG ACCAC                TTTTTTATCCAAAGT  79 36
APT61_RS06695 1435157 .. 1435191 + -17.2  -3.87994   CCGAGGCCTGATAAC     TCAAAAGGGCAGGGCC AGT GGCGCTGCCCTTTTGC     TTTCTAACCGTAACT 100 30
APT61_RS06700 NONE
APT61_RS06705 1437280 .. 1437303 +    -6  -5.63517   GACGCAACGGCCAGT          GGCGTTGA TTATTTTT TCAGCGCC           TTTTTTATTTACGCG 100 119
APT61_RS06710 NONE
APT61_RS06715 1439463 .. 1439474 +  -7.2  -2.53263   CGTCATCACAGGCGA                GGGC GTCT GCCC                 TCGCTTGCAACTCCC  56 42
APT61_RS06720 1440145 .. 1440161 + -12.3  -2.57132   CAGGTCAGCGCAACG              TGCCCTG TTT CAGGGCA              ATTCTGCAACCGCGA  78 65
APT61_RS06725 1441248 .. 1441278 +  -9.6  -3.33492   AGCGGCAATTGCGAA       CCATCGCGGTGCAG CCA CTGTGCCGGGCTGG       TTATAAAGTGAATAG  73 88
APT61_RS06730 NONE
APT61_RS06735 NONE
APT61_RS06740 NONE
APT61_RS06745 1444529 .. 1444568 +  -2.9  -4.09685   CAGGCCGCACGACTG CTGTAAACGCCCGGTG-GCG CTA CGCTTACCGGGCC-T-ACGG TTTTGGCAGGTCGGG  56 76
APT61_RS06770 NONE
APT61_RS06775 1448535 .. 1448549 +  -4.2  -3.53343   CCTCAACAGTAAAAC               GCGC CGCGAGA GCGC               TTTAAAGAGAAGGTT  52 47
APT61_RS06780 1449129 .. 1449146 + -12.7  -4.81851   GCGACCATAAAAAAA             GGCGACC ATCA GGTCGCC              TTTTTGCGTTTAGAT 100 43
APT61_RS06795 1453405 .. 1453431 +  -7.3  -5.78622   CGATGAATAAAAGAA         GGCACAGTAAC CCAAC GTTACCGTGTC         TTTTTTTTACGCTGC 100 54
APT61_RS06800 NONE
APT61_RS06805 1454646 .. 1454663 +  -8.4    -5.252   TAATCCCATGATATA             GCCCCA CATTGT TGGGGC              TTTTTTATGGCACTA  95 38
APT61_RS06810 1456866 .. 1456887 +  -6.5  -4.43501   TCATCCGGCACCATA           TCGACCAGT TTCT GCTGGGCGA            TTTTCTCAATCGCTT  74 348
APT61_RS06825 1460422 .. 1460455 +    -6  -5.50499   TTGTTCCCGGAAAAA     GAACCACTCAGGCTG ATAAC CCG-CAGAGTGGTTC     TTTTTTTGCATCTGC  90 68
APT61_RS06830 NONE
APT61_RS06835 NONE
APT61_RS06840 NONE
APT61_RS06845 NONE
APT61_RS06850 1465881 .. 1465920 + -12.1  -3.52849   GGTAATTCCCCCTCA  GGCCGGCTCTCTCCCTC AAGGGA GAGGGAGAAAACCGGGC   TATTTCCTCTCCTTC  86 36
APT61_RS06855 NONE
APT61_RS06860 NONE
APT61_RS06865 NONE
APT61_RS06870 NONE
APT61_RS06875 1471128 .. 1471143 +  -2.5  -3.18199   TTCAGTAAGTGAGTT              GCGTG GATGAA CATGC               TTGCCTTAACCATTA  43 16
APT61_RS06880 1473048 .. 1473066 +    -3  -2.80966   AAAGGAATGCAAATC             GCCATGTT ACT ACCCTGGC             TAATATTAATTCCCT  42 98
APT61_RS06885 NONE
APT61_RS06890 1476060 .. 1476073 +  -9.5  -5.70829   GGTAAAAGTAAAAAA               CCCGC CTCA GCGGG                TTTTTTTATGGTCTT 100 41
APT61_RS06905 1478767 .. 1478779 +  -4.1  -2.90194   GTAGCAGGCAGAATC                GGCAA GGA TTGTC                TATAGTTAGCGAACT  45 37
APT61_RS06910 1479153 .. 1479184 +    -6  -2.86177   TTCTCCCTGCCAAAT     CGTGGGTACTG-CT TTTTCC AGCCAGTACCC-CG      TATAATGTAAGGTCT  52 55
APT61_RS06915 1480499 .. 1480511 +  -3.4  -3.22476   CCGGACTGCGTTCTC                TCCT CCTAA AGGA                TTAATACTGAGTCGT  46 9
APT61_RS06920 NONE
APT61_RS06925 NONE
APT61_RS06930 NONE
APT61_RS06935 1484848 .. 1484858 +  -2.4   -2.6999   ACTCGACGTCGAGGC                 GCTG GAG CCGC                 TGCTATGAGTTTTAC  39 7
APT61_RS06940 1486294 .. 1486311 + -12.7  -4.20136   ATCCTGCGATAAAAA             CGGGAGC CCAG GCTCCCG              TTTCGTTTTCAACGT 100 95
APT61_RS06945 1487088 .. 1487111 +  -9.6  -4.45168   GCTTCTAATCTATTT          C-GGCGCAGTG CTC TACTGCGCCAG          TTTCTCTTTTCACCC  85 33
APT61_RS06950 1488471 .. 1488485 +  -3.5  -3.57792   GGGTGGACATTTCAA               TCTGC CATTT GCAGG               TTTCGCAGTCCGTCA  49 123
        glpT NONE
        glpQ 1495195 .. 1495220 + -11.9  -3.69434   GATTTCGATATCCCC         TTTTGCCCGGC AGCA GCAGGGCAAAA          TTTCCCCTTCGTTAA  85 118
APT61_RS07000 1502779 .. 1502795 + -15.1  -5.08255   TCTCCTGACGATAAA              GGGCCGG TCT CCGGCCC              TTTTCTTTTGCCGGT 100 43
APT61_RS07005 1505858 .. 1505875 + -14.1  -2.61264   CCGCGAACGTGACAA             GGGGGCC GCCG GGCCCCC              CTTGTCAATCCCCGC  88 130
APT61_RS07020 1511784 .. 1511799 + -11.8  -5.47399   CGTACTATTGCAAAA              GGGGCC AAAA GGCCCC               TTTTTTTGGCCTTAC 100 47
APT61_RS07025 NONE
APT61_RS07030 NONE
APT61_RS07035 1514753 .. 1514774 +  -6.5  -3.43245   TTCTTGATGTAAGTG           GCGGGCAGT TTAC ACTGCTGGC            TGATTTTTCTTGTCT  59 53
APT61_RS07040 1516455 .. 1516484 +  -7.8  -2.80077   GCCTGAGTGTCAATG       TGCCGGGTGGTGG CTTCA CC-TCACCCGGCC       TGCGTTTTATCAGCC  59 35
APT61_RS07045 1518208 .. 1518247 +  -7.3  -4.25104   TCGGCGACGGGGGCA CCTTTCACCGTGGCAGGGC GAAT GCTCTGCCA-GTT-AAAGG  TTTTGATGGCGACAA  71 163
APT61_RS07055 1521178 .. 1521198 + -15.5   -5.4505   TCTGATGTAAAAAAA            GCCGGGTTA ACA TAACCCGGC            TTTTTTATTAACGCG 100 36
APT61_RS07065 NONE
APT61_RS07070 1523499 .. 1523540 +  -2.4  -2.91593   CCGTTTTGTTACCAA TGTGGGCCTTTCTATCAGG AGATC TCT-ATGAAAAGGACCACA GTTTATACCGCGCTG  40 90
APT61_RS07075 1524963 .. 1524980 +    -7  -5.82388   CCAGGCATAAAAAAA             CCAACC GTAAAA GGTTGG              TTTTTTTTGGGATTT 100 68
APT61_RS07095 1528311 .. 1528325 + -12.8    -5.252   ACGGCCATAAAAAAA               CCCCGC AAT GCGGGG               TTTTTTCTCAACCTG 100 40
APT61_RS07110 NONE
APT61_RS07115 1532602 .. 1532618 + -11.5  -5.28683   ATAGTGCAGCGATAA              GGGTCCC GAC GGGGCCC              TTTTTTGATGTTGGT 100 37
APT61_RS07120 1533679 .. 1533699 +  -6.7  -3.71924   CTGCACGCTGAGCGT            GGGCTGATG CAC CCGCAGCCC            TTCTTCGATAATTTG  61 437
APT61_RS07170 1546362 .. 1546377 +  -7.5  -5.64274   GGGCCGACAAAAAAA              CCGGC CATTGA GCCGG               TTTTTTTATGCGTGC 100 71
APT61_RS07180 1547757 .. 1547782 +  -7.5  -4.21194   GCGACGGCAGCAATG         CGCATCAGGAA GCGT TTCCCGAAGCG          TTTTGCATAGTAACC  71 347
APT61_RS07190 NONE
        fruK NONE
APT61_RS07200 1552783 .. 1552802 + -13.6  -6.17292   TTCTTCATTCAAAAA            GGGCAGAG GCGA CTCTGCCC             TTTTTTTTTGCATTT 100 44
APT61_RS07220 1556146 .. 1556157 +  -7.2  -3.28712   TGTGAAATGTAAGCC                CGCC CGGC GGCG                 TTCTGCCCGCCGGGA  62 29
APT61_RS07225 1557810 .. 1557827 + -12.7  -6.02914   AACGCCTCTCTTTAA             CCCGCTC ACTC GAGCGGG              TTTTTTTTATCTCCA 100 45
APT61_RS07230 1560227 .. 1560259 +  -7.5  -2.57132   ATAGCTGTGATCGTA      GCCTGGCTGGATGCG TAA CGTCAGCGGCCAGGC      CTTCTGGCGCGCAGC  50 197
APT61_RS07240 NONE
        folE NONE
APT61_RS07250 1564249 .. 1564268 +    -5  -3.39749   AATCATTAACAAAAC            GGATGTAA CCGT TTTCATCC             TTGTGAGCTTCTTCA  52 54
APT61_RS07255 1565459 .. 1565478 +  -9.3   -4.2828   AGTAAGTTAACAAGG            CGCTGAC TATGAT GTCAGCG             TTTTAGTGACTGAAA  80 83
APT61_RS07260 1566704 .. 1566722 +   -16  -4.36914   TTTTAGCATTCTACT             GGGCGCAG TTT CTGCGCCC             TTTTATCACGCGACG 100 42
APT61_RS07265 NONE
        mglC 1569325 .. 1569339 +  -8.5  -5.60993   TCAACGCATAAAAAA               CCCGC TTAAT GCGGG               TTTTTTTATGCCCGG 100 45
APT61_RS07295 NONE
APT61_RS07300 1573566 .. 1573581 +    -4  -4.35085   CACCTTCCGCGGGAG              CG-GCTA CTA TAGCGCG              TCTTTTTTTACGGGT  65 79
APT61_RS07305 1574639 .. 1574669 +  -6.9  -6.02919   CTGCGGCAGGCAAAA      CCTGATTTTCTGGC ATCT GCCGGA-GGTCAGG       TTTTTTTGTTTCTGG 100 129
APT61_RS07310 1575570 .. 1575605 +   -11  -6.20267   ACTGTGCAGGCAAAA    CCTGAGCGCGGCTCCC GAAA GGGCGTCGTTCTCGGG     TTTTTTTATTTTTAG 100 69
APT61_RS07315 NONE
APT61_RS07320 1578946 .. 1578970 + -19.3  -4.46155   GCTAAGGATCGCCAG          GGCACCCGGCG GCG CGCTGGGTGCC          TTTTCTGAATATATC 100 36
APT61_RS07325 1580493 .. 1580534 +  -3.1  -4.58395   GGCGGCTATCAGCAT GGGTAGAAAGTGAGAAGTA TCTA TACTTATCTCTTTGTATTC  TTTTTCGGAGGTGAG  65 20
APT61_RS07330 1581625 .. 1581645 +  -4.6  -5.67063   AGGGATGGCGCTGGA            TCAGCCGC TGTGC GCGGTCGA            TTTTTTTCTGGTGCC 100 326
APT61_RS07345 1582919 .. 1582954 + -13.4  -3.08867   CGTCTCTTCTGAGGC    TCCTGCATTGCTGGTG TAAT TGCCAGCAATGCAGCA     TCTGTTCACGATTAA  86 29
        pbpG 1584422 .. 1584456 + -10.7  -3.53733   AATTCCCCGATAGAG    C-GCCACCAGCCAGGG CAAC CCCTGGCTGGTCACCG     TATTTATACGCTGGC  71 444
APT61_RS07365 1589300 .. 1589312 +  -6.9  -3.18681   GACGATTTCGATCCC                GGCCG CCG CGGTC                TTACTGCCATTACCG  57 359
APT61_RS07370 NONE
APT61_RS07375 NONE
APT61_RS07380 NONE
APT61_RS07385 1593399 .. 1593423 +  -7.9  -3.53012   TATACGGTGAAGCAC          GGCTGTTAATG AAC CATTAATTGCC          TTTCAGCGGGAACAC  66 157
APT61_RS07395 1596048 .. 1596062 +  -2.8  -2.85216   CCTCTGGAGGAACAC               GCATGT TGA ATGTGC               TGATTGTCGATGATG  42 17
APT61_RS07400 NONE
APT61_RS07405 1597366 .. 1597403 + -16.7  -3.62096   GGGTAGTAAAAGGTA   TAA-AAAAAAGCCGGAGA TTA TCTCCGGCTTTTTTGTTA   TTTCACCTGATGACC 100 105
APT61_RS07415 1600752 .. 1600771 +  -9.2  -4.76874   GCGCAAAGACAAAAA            CGGTCACC TCAG GGGGACCG             TTTTGCTTTTATCTT 100 97
APT61_RS07425 NONE
APT61_RS07430 NONE
APT61_RS07435 1605441 .. 1605463 + -14.1  -3.10677   GGGAAGGGGAATAAA           CCCGGCGGC AGAGC GCTGCCGGG           TTGAATAACTTACTT  90 43
APT61_RS07455 NONE
APT61_RS07460 NONE
APT61_RS07465 1612186 .. 1612212 + -10.8  -3.71607   CATCGCCTGAGCAGG         CGGCCCGCCT CTTTATC AAGCGGGCCG         TTTAAATCATATTAC  81 31
APT61_RS07485 1617387 .. 1617399 + -10.5  -3.40073   AGAATTTCACCCACC                CCGCC GTG GGCGG                TTAATTCATCGAGCT  69 248
APT61_RS07495 NONE
APT61_RS07500 1621156 .. 1621188 +  -8.4  -2.63073   TTAATTTTAATAAAA     AACGCC-CTCTGGCA ATAC TGCCAGAGCGGCGCC      CTGTTCTTACAAAAG  61 37
APT61_RS07505 1622559 .. 1622574 +    -6  -3.25896   GTGAGCGCAGATCCC              CCGGGG ATGT CACCGG               TCTTATGCGTCCTGC  55 95
APT61_RS07510 NONE
APT61_RS07515 NONE
APT61_RS07520 NONE
APT61_RS07525 NONE
APT61_RS07530 NONE
APT61_RS07535 1629646 .. 1629671 +  -6.2  -5.03747   CCCGTGAAGCAGATA         TGAGACGCCGC CCAGC GCGGC-TTTCA         TTTTTTCCGGGGTTT  89 512
APT61_RS07555 1632636 .. 1632660 + -10.7  -3.36823   GATCACAGCTAATTA          CCCACAGGAGG TGG CCTTCTTTGGG          TTGAATTTTGAGGAC  78 155
APT61_RS07560 1633253 .. 1633280 +  -6.9  -3.90112   GTTTGGATAAAAAAA        CGCCGACGGCA GGACAG TACAGTCGGCG         TTTAATTCAGCGGGG  66 67
APT61_RS07580 1635899 .. 1635923 +  -7.3  -3.13403   TGTACACCCCGGTGA          GATTCGTTA CTTTGGT TAACGAATC          TATTGGTCAGACAGG  60 92
APT61_RS07585 1636821 .. 1636833 +  -7.7  -4.81551   ATCAAGGGATTCCAG                CTTGC GCC GCAAG                TTTTTGATGTGGCTG  87 156
APT61_RS07625 1650709 .. 1650723 +  -3.4  -3.79747   GGTTGACAGCGGCAG               GGCGAC CCC GGTGCC               TTTGCTGGTCAATGG  55 488
APT61_RS07635 NONE
APT61_RS07640 NONE
APT61_RS07645 1657221 .. 1657233 +  -4.7  -3.25652   GCATTCAGTCTATAA                GACCG CAC CGGAC                TATTCCTTCCCTCCC  50 162
APT61_RS07655 NONE
APT61_RS07660 NONE
APT61_RS07665 NONE
APT61_RS07670 NONE
APT61_RS07675 NONE
APT61_RS07680 NONE
        wcaD 1667388 .. 1667403 +  -3.2  -3.14564   TTATTTTGCGCAAGG              CGCTTA ATAT TACGCG               TTCATAACGAGGTGG  46 3
APT61_RS07690 NONE
APT61_RS07695 NONE
APT61_RS07700 NONE
APT61_RS07705 1670837 .. 1670849 +  -3.3  -2.72902   GGAAAACCAGCAGCG                CTTCC GGG GGTAG                ATATGTTTTTAAGTC  42 13
APT61_RS07710 NONE
APT61_RS07715 NONE
        cpsB 1674174 .. 1674199 +  -3.9  -3.09878   GAAAACAAAAATTTA         ATTGGCCCTGTC CGG GTC-GGGCCAAC         TGTTGCCTGAATAAG  48 85
APT61_RS07725 NONE
APT61_RS07730 NONE
APT61_RS07735 NONE
APT61_RS07740 NONE
APT61_RS07745 NONE
        wcaM NONE
APT61_RS07755 1683528 .. 1683577 +  -9.7   -5.2853   TTGTCGTTGACTAAA CGGCAGTGGATCATTC-CA-GGCTT TTAT AAGCCATGTGAATGA-C-ACTGCCG TTTTCTTTTTAAATA 100 49
APT61_RS07760 NONE
APT61_RS07765 1685874 .. 1685889 + -10.4  -4.11216   TGACCTTACATTAAA              TGCCCG TTTA CGGGCA               TTTTGCACATAAAGA  85 38
APT61_RS07770 1686914 .. 1686926 +  -4.9  -3.40371   CGCATTCCAGACAAG                TCATT TTG AATGA                TTGATTAATCAGATA  52 147
APT61_RS07775 NONE
APT61_RS07780 NONE
APT61_RS07785 NONE
APT61_RS07790 NONE
APT61_RS07795 NONE
APT61_RS07800 1693566 .. 1693578 +  -3.3  -2.97747   ATGGCGCGGTGACCA                CACCT GAC AGGAG                TATGTAATGTCCAAA  45 130
APT61_RS07805 1695020 .. 1695038 + -14.6  -6.28967   AGTCATGTAGCGAGA             CCCGGTGA ATG TCACCGGG             TTTTTTTTATTTGTA 100 54
APT61_RS07810 1696432 .. 1696451 +   -15  -5.77853   CAACAGCAGAAAAAA            GCCCGGCA ATTA TGCCGGGC             TTTTTTTTAAACCTT 100 47
APT61_RS07820 1698652 .. 1698665 +  -9.5  -6.02919   AAAGCTGAAAAAAAA               CCGGG TTTC CCCGG                TTTTTTTATTTGTGC 100 40
APT61_RS07865 NONE
APT61_RS07870 1707943 .. 1707970 +  -5.7     -6.13   GCAGCAAACATGGAA        TAATCGACG ATATAAAAGG CGTCGATTA         TTTTTTTTTGCATGT 100 109
APT61_RS07875 1709534 .. 1709554 + -12.5  -4.49353   GGCAAAGAAAAAAAA            GCCGGAGAC ATC GCCTCCGGC            TTTATTGTGTTCTCA 100 74
APT61_RS07885 NONE
APT61_RS07890 1712983 .. 1712996 +  -2.3  -4.84017   CGCCGCACATATTCC               CACTG TTTA CAGGG                TTTTTCTGCCGGGTT  70 41
APT61_RS07895 1714243 .. 1714253 +  -2.4   -3.9122   TGTCAGTAATGTTAA                 CGGC ATC GCGG                 TTGTTTAAACGAATC  52 139
APT61_RS07900 1714652 .. 1714673 + -13.7  -5.83822   CGCTGAACAGGCTAA           GCCCTCCGA CTTG TCGGGGGGC            TTTTTTTTGGCTCTG 100 45
APT61_RS07910 NONE
APT61_RS07915 1716649 .. 1716686 + -17.3  -3.21934   CAGAGGAGCCAAATT   TGAAAAGCCTGCTTAAG GAAA CTTAAGCAGGCTTTTTG    CTTTTCTACCCACAA 100 30
APT61_RS07935 1722626 .. 1722651 + -17.7  -4.24404   CCCGGAAAGCAAAAA         GCCCGCTTAAG TTTC CTTAAGCGGGC          TTTTCAAATTTGGCT 100 47
APT61_RS07945 NONE
         cbl 1725300 .. 1725325 + -17.7   -3.7104   GTGGAAAAGCAAAAA         GCCCGCTTAAG TTTC CTTAAGCGGGC          TTCTTAAATATGGCT 100 304
APT61_RS07965 1726862 .. 1726910 +  -8.8  -3.53012   ACTCGATACCCGGAT GGGCATCAATCCACAGGCACAGC GTGC GCAGCGTCTGTGGGGTGA-GTCC TTTCGGCAGGCGGCG  66 395
APT61_RS07985 NONE
APT61_RS07990 NONE
APT61_RS07995 NONE
APT61_RS08000 1733791 .. 1733828 +  -3.3  -2.75382   CTTAAGGTTTCTCCG   CCTGAT-ACGGCGTAACC ACC GGTTTGGCCGGGAACAGG   TACTTGCCTAACGTC  43 11
APT61_RS08010 1735768 .. 1735783 +  -3.2  -3.23711   AACTCGTGGAAAAAA              TGCGAG GTCG CTCACA               TTAATAACTTCTGGC  46 6
APT61_RS08015 1736058 .. 1736076 + -17.4   -4.8667   GCTTAAGTCACGCTA             CGCCCGGC ATT GCCGGGCG             TTTTTGTGCGCTATA 100 35
APT61_RS08020 1737858 .. 1737877 + -10.7  -3.14468   TCCAACCCTTCACGC            CAGCCCG CAGGGC CGGGCTG             TTGGGTGTGGTAAAC  66 41
APT61_RS08035 1740015 .. 1740033 +  -2.4  -3.01848   GGCTTAATGATAAAG             TCGGAAAT TTA ATTTCTGC             TACATTTTTTATTTC  41 349
        fliE 1751869 .. 1751879 +  -5.4  -3.23899   CTCCAGCGATCATTT                 CAAC ATT GTTG                 TTAGATTAATTAAAA  52 54
APT61_RS08115 1752723 .. 1752764 + -14.8   -3.8377   TTTAATTTTAATGAT AAATAAAAAGGTCAACCT TTTATC AGGTTGACCTTTTTATTA  TTTACTATAAGAGTT 100 46
APT61_RS08125 1754063 .. 1754086 + -14.6  -4.09459   TAAGAGATCGGGTGG          CCGGGCAAGCG TAG CGCT-GCCCGG          TTTCTCACTTTTTAC 100 38
APT61_RS08150 1759097 .. 1759112 + -11.8  -5.01811   GCTATATAGGTCAAA              CCCGGC AATG GCCGGG               TTTTTAGTTTACTAG 100 50
APT61_RS08155 1762846 .. 1762870 + -10.1  -3.07962   AATATTCAGATGATA          GCCTCAGTA ATTACTA TACTGAGGC          TATTAAAATATAGAA  72 63
APT61_RS08160 NONE
        fliA 1764593 .. 1764612 +  -2.8  -3.05384   AAACTGGGTAAGTTA            TAGGTGAT TCCA ATCACCCG             TTAAGTGCCGCACAA  43 23
APT61_RS08170 NONE
APT61_RS08175 1766111 .. 1766128 + -11.3  -5.68438   TTGAATGCAAAAAAA             GGCGCTT TGAT AAGCGCC              TTTTTTATTTCCTCG 100 45
APT61_RS08180 NONE
APT61_RS08185 NONE
APT61_RS08190 1768640 .. 1768666 + -11.6  -3.08867   CATATTTGTTCTTAA         TTGCTCCGGTAA CAA TCGCCGGAGCAA         TATATTCACCCTTCA  78 41
APT61_RS08195 1769602 .. 1769626 + -14.3  -5.62288   TTGCAGGCGATGAAA          CGGCTGAAGGC ACT GCGTTCAGCCG          TTTTTGTTTTATTGA 100 59
        sirA NONE
        uvrC NONE
APT61_RS08215 1773410 .. 1773422 +  -4.1  -3.83705   TCGCGGCGATTTGCT                TGATC AGT GATCG                TTTCGTCGTAATTTT  57 16
APT61_RS08220 NONE
APT61_RS08225 NONE
APT61_RS08230 1773916 .. 1773929 +  -8.1  -5.64274   AGCAGTGTCGTGAAA               CCACC GAAA GGTGG                TTTTTTTGTGCCTGA 100 70
APT61_RS08260 NONE
APT61_RS08265 NONE
APT61_RS08270 1781218 .. 1781268 + -12.6  -2.84581   ATGGCTTAATTATTA TTTCTGGCGTCGCGTCTCTCTCAC CGT GTGGGAAAGACGCGCTACCACAAA ATTATTAATAAATTA  81 59
APT61_RS08275 1783199 .. 1783211 +  -9.1  -2.64099   GATCGGAAAGCTTCA                GCGCA TGG TGCGC                GTTCTGCTCCACGAG  57 180
APT61_RS08305 1789259 .. 1789270 +  -7.2  -3.27617   GCCGGGTAAGCACAG                CGCC TCCC GGCG                 TTACTGCGTTTATTA  62 87
APT61_RS08315 NONE
APT61_RS08320 1791400 .. 1791419 + -16.4   -2.9648   GCCACTAATAATAAC            GCGGCGCC AGAA GGCGCCGC             TATGATATTAATTTT 100 33
APT61_RS08335 1793420 .. 1793435 + -10.4  -5.60993   CCAACGCCAGGAAAA              GCCAGC TTAT GCTGGC               TTTTTTTATGCCCGC 100 45
APT61_RS08345 1795846 .. 1795860 +  -4.2  -3.53012   CGTCAACGCTGCCGC               CTGGCT ATT AACCAG               TTTCGAGACCAGGAA  51 367
APT61_RS08360 1798933 .. 1798944 +  -3.6  -4.21812   GCTTTAAACACGGTT                GGCG CTAA TGCC                 TTGTTTTAAGTCCGA  60 253
APT61_RS08365 1800017 .. 1800052 +  -6.8  -3.10164   GTAAGTAATTTACTG    TGATTGCGCCCCCCG GCAGTCG CGGGGGGC-CAGACG    TTCACTACTCGATCC  57 33
        araG NONE
        araH 1802610 .. 1802622 +  -4.9  -2.78715   TCCTGCCTTCCGCGA                CTTAA CTT TTAAG                TGTAGTCGCGACCTT  47 47
APT61_RS08380 NONE
APT61_RS08385 1805261 .. 1805273 +  -5.5  -3.48474   GAATATCTTCCAGCA                TTGGC GCA GCCAG                TTGATTGTACATTTC  55 318
APT61_RS08395 NONE
APT61_RS08400 1807162 .. 1807185 + -15.4  -5.75342   ACGGGCAAGACTCCA          GCAGCGGTAA GCAA TTACCGCTGC           TTTTTTTTGCCCCGC 100 50
APT61_RS08405 NONE
        motB NONE
APT61_RS08415 1811082 .. 1811097 +  -3.2  -2.78712   TCGTGAACAACGTAT              GGCG CACACAGC CGCC               TGATTCAGTTAAGAA  43 7
APT61_RS08420 1811663 .. 1811693 +  -7.7  -5.42514   CTTTTAATACATATG       GCTGTAGTGGA ATTGTTCCG TTCACTACAGC       TTTTTTGCTTTATGA  95 63
APT61_RS08430 1814558 .. 1814574 +  -2.1  -5.67063   CTCCGACATACGGGA              GAGGGCA AAC TGCGCGC              TTTTTTTGTCCTGAG  83 77
APT61_RS08435 NONE
APT61_RS08440 NONE
APT61_RS08445 NONE
APT61_RS08450 1819158 .. 1819173 +  -3.2  -3.20832   CCTGGTCGTCGACGT              CGCG TTCTGACC CGCG               CTTTTCCCTTTCGCA  46 16
APT61_RS08455 NONE
APT61_RS08460 NONE
APT61_RS08465 NONE
APT61_RS08470 NONE
APT61_RS08475 NONE
APT61_RS08480 1825592 .. 1825611 + -12.2  -5.20216   ATTGCCCGGCACAAA            TGCCACCT GCAA AGGTGGCA             TTTTTTCCTCCTCTC 100 68
        flhB NONE
APT61_RS08490 NONE
APT61_RS08495 1829394 .. 1829423 + -13.7  -3.02013   AATGCCCGCTTTTTC       GCCAGTTATCAGG CCAT TCTGATGACTGGC        TCTCATTATTGACCT  86 40
APT61_RS08500 NONE
APT61_RS08505 1832371 .. 1832400 + -18.1  -3.49618   AAGTACTTCTGATAA       TAAAAAACCCGGC AAAT GCCGGGTTTTTTA        TTCGTTCTGTAGCCC 100 29
APT61_RS08515 NONE
APT61_RS08520 1835806 .. 1835830 +  -6.4  -5.68039   TGCTTGTTTGTACCA          GGCCCCTG CAATTTCAA CAGGGGTC          TTTTTTTGTCCATTT 100 77
APT61_RS08550 NONE
        nudB NONE
APT61_RS08560 1842896 .. 1842907 +    -3  -3.33261   ACAACCGGAGAGGCG                TGAT GGCG ATCA                 TTCTCGGCATTGACC  47 58
        ruvC 1843431 .. 1843450 + -12.2  -5.67063   TTAAATGAAAAATCA            GGCTGGAT GTTT ATCCAGCC             TTTTTTTATGATGGC 100 37
        ruvA 1844094 .. 1844107 +  -5.9  -3.32844   CCCTGATTCGTGAAG               CGCTG CGCG CGGCG                TTGTGAGGTAAAGGA  57 6
APT61_RS08575 1845154 .. 1845165 +  -7.2  -3.33261   TGGAAAAGGCCGGAT                GGCG ATAG CGCC                 TTATCCGGCTTAGAG  62 47
        znuA NONE
APT61_RS08595 1849137 .. 1849158 + -13.7  -5.54907   TCTGCAGCGTCAGAA           GCCGGTGCG TTAC TGCACCGGC            TTTTTCTTTTGTGCC 100 42
APT61_RS08600 1850213 .. 1850230 + -12.7  -5.60993   CTAAAAAATAAAAAA             TCCCCCG GTTT CGGGGGA              TTTTTTTATGGCAAG 100 30
APT61_RS08620 1854629 .. 1854654 + -14.7  -5.80364   TATTTAATCATTTAA         GCTCCGTGTGG ATTT CCACCCGGAGC          TTTTTTTATTACACT 100 105
APT61_RS08625 NONE
APT61_RS08630 1857376 .. 1857391 + -11.8  -5.67967   CAATGCCAACAAAAA              CGGGCC ATTC GGCCCG               TTTTTTTATCCTGCT 100 128
APT61_RS08640 1859075 .. 1859086 +  -2.2  -4.43307   CCTCTCACCCAAAAA                GTGA ATTT TCGC                 TTCTTTTGTTGCCGC  61 22
APT61_RS08645 1859828 .. 1859838 +  -8.2  -3.77219   CTAACTTTTTACGTC                 CGGG TAT CCCG                 TTTCGCTTGCATCGT  71 37
APT61_RS08650 1862116 .. 1862151 +  -9.6  -3.73224   TACCGAAGGTAAAGG    TGGTCAGCAGCGCCGG GCGT CCGGTGATGTCGGCCA     TTTCGTCCGGGGTCC  72 153
APT61_RS08670 NONE
APT61_RS08675 NONE
APT61_RS08680 1865412 .. 1865440 +  -8.2  -5.19879   TTCCAATAAAAAAAA       CCGCAG-GCTTCT CTTC GGAAGCATTGCGG        TTTTTGTGTTTAAGG  95 49
APT61_RS08690 1867828 .. 1867843 + -11.8  -3.60792   TAGAGGGACAAATAA              CCCGCC TGCG GGCGGG               TTCTCTCTGAATCAT  83 294
APT61_RS08720 1874260 .. 1874279 + -12.2   -3.1552   GTAGCATTTACCGAT            GGCGTCAT TATA ATGACGCC             TGTTCATGCCTGCGG  82 53
APT61_RS08725 NONE
APT61_RS08730 1877093 .. 1877114 + -13.1  -5.80364   AAAATAATCCCTCAA           CAGGCACAA GAAA TTGTGCCTG            TTTTTTTGTTAACCT 100 34
APT61_RS08735 1878184 .. 1878201 + -12.7  -5.64274   CTTGTAAATGAAAAA             GCGCGTC CACG GACGCGC              TTTTTTTATGCCTGC 100 50
APT61_RS08745 1880569 .. 1880586 +  -9.1  -5.36441   TTCCGGTATAAAAAA             CGCTGCT CTTG GGCAGCG              TTTTTTATGTGCGGA 100 44
APT61_RS08755 1881133 .. 1881149 +    -3  -4.83615   CTGTGAATAAGTTTA             T-CCCGT GGTA ACGGGCA              TTTTTCTCGCAAATG  71 15
APT61_RS08760 NONE
APT61_RS08765 1882641 .. 1882665 +  -6.4  -2.94912   ATCATTATTTTGGTG          CATAGCGACG AACAA CGTTGCGATG          TATATAAGTTAAACA  55 150
APT61_RS08770 1883462 .. 1883479 + -10.5  -4.75404   AGTTGCAGAGATAAA             GCCTCGC TTGT GCGGGGC              TTTTTAATGCAATTT 100 78
APT61_RS08775 1885364 .. 1885389 +  -3.9  -4.05446   AGGCGTTTTACAGCG         GGGCGATTAGCG GTA CACTT-TCGCCC         TTTATGATTGCCCGG  60 44
        rrmA 1886279 .. 1886298 +   -10  -3.64703   CCGATTAACACGATA            C-CGCCGAG GAT CTCGGCGCG            TTTGCCTAACAGCGG  75 77
APT61_RS08810 1892687 .. 1892698 +  -4.4  -4.56597   ATCAATTTTTAGCAC                CTCA GGAT TGAG                 TTTTTCCAGCCACGA  72 314
APT61_RS08835 1898267 .. 1898278 +  -5.8   -2.8165   ATGTCTGTTTCAGCA                GGCA AGAC TGCC                 ATATTGTTTTGCCTG  52 407
APT61_RS08845 NONE
APT61_RS08850 NONE
APT61_RS08855 1901678 .. 1901704 + -11.6  -5.03145   TGTTATTATTGAATA         AGAAACAGTGGC CAG GCCGCTGTTTCG         TTTTTTCCACGGTTA 100 46
APT61_RS08860 1903571 .. 1903587 + -13.7  -5.60993   TTAGTCACCCCAAGA              CGCTGGC CAT GCCAGCG              TTTTTTTATGGGCGC 100 49
APT61_RS08865 1904847 .. 1904876 +  -9.9   -3.6502   GCGCTCAATTATGAA       CGCGACTCTTCCG CTTC CGGCAGGGTCACG        TTTAGCTCCAGAATC  76 123
APT61_RS08885 1907074 .. 1907086 +  -5.5    -4.128   CAGCGTCACATTCAC                CGTTC AGG GGACG                TTTATGTATCAACAT  64 57
APT61_RS08890 1907755 .. 1907782 +  -7.7  -3.06183   CGTGCTGTAATCCCC        G-CTTGCCGCCC CTTTT GGGCGGCAAAAC        TTGCATCAAGGTGCC  60 31
APT61_RS08895 1908287 .. 1908314 + -15.8  -3.31322   CCCAACCGCGCATAA        TAAAAAACCCGC CGAG GCGGGTTTTTTA         TTGTCGGACATTAAC 100 26
APT61_RS08910 1911463 .. 1911478 +    -9  -5.78622   GCGCTAAATAAAAAA              CCTCTC GTTT GAGAGG               TTTTTTTTCGGCTAA 100 34
APT61_RS08920 NONE
APT61_RS08925 1916154 .. 1916167 +  -9.5  -3.05384   ATCCCCTTCACGCAG               CCGGG TGCT CCCGG                TTGGGTGCAGCAGGG  64 416
APT61_RS08940 1919274 .. 1919306 +   -17  -3.54638   GGACGCCATGTAATC      CGTTACCGGGCAGC CACGC GCTGCCCGGTCGCG      TTTAACGCACCTTGT 100 28
APT61_RS08950 1920512 .. 1920531 + -12.2  -6.19443   CTGACCTACGTAAAA            CGGCTCTT AACT AAGAGCCG             TTTTTTTTTGGTGTC 100 37
APT61_RS08960 NONE
APT61_RS08965 1925096 .. 1925108 +  -5.5  -2.71712   CTGAATACCGGAACT                TAGGC GTG GCCTG                CTTTGCGAAGAAGAC  48 37
APT61_RS08970 1925976 .. 1926005 + -11.5  -3.59979   AATCTCTGAAGTGAA       CCGGTCAGATCGCC TCT GG-GGTCTGACTGG       TTTCGCGTAACGCCC  83 39
APT61_RS08980 1928441 .. 1928463 + -10.5  -3.14344   GCAGCGGCCCCAGCG           CGGCACCGG TCATC CCGGTGGCG           TTAATCACCGCGATA  66 218
APT61_RS08990 1930542 .. 1930564 + -11.9  -5.95166   ACAGGTTAATTTTGA           GCCGCGCCG ATCCA CAGCGCGGC           TTTTTTTTCATTCCC 100 108
APT61_RS08995 1931976 .. 1931987 +  -2.2  -3.90048   GAGTACCACTCATTG                CG-GC AGC GCTCG                TCTTTTTGCGGGCCG  52 82
APT61_RS09000 1933129 .. 1933142 +  -3.7  -3.10925   GGTCTACTTCGGTGG               CCAGC CTCT GCCGG                GTTATTTGTAATTTT  46 1
APT61_RS09005 NONE
APT61_RS09010 NONE
APT61_RS09015 NONE
APT61_RS09020 NONE
APT61_RS09025 NONE
APT61_RS09030 NONE
APT61_RS09035 NONE
APT61_RS09040 NONE
APT61_RS09045 NONE
APT61_RS09050 NONE
APT61_RS09055 NONE
APT61_RS09060 NONE
APT61_RS09065 NONE
APT61_RS09070 1943953 .. 1943975 +   -22    -5.093   TGAGGATTGAAAGGG           CCGGGGCCGC ATA GCGGCCCCGG           TTTTGTTATTTTGGG 100 45
APT61_RS09080 NONE
APT61_RS09085 1946084 .. 1946123 +  -6.2  -3.38522   ATAAAGCGTAAGGTC  TGCGCGGCGTCTTATCGG AGGG CCTGCGGGGCGTCGCGCG   TCTTTGGCCTACATA  57 44
APT61_RS09090 1946966 .. 1946977 +  -7.2  -3.33473   AGTGGTAGACAATTT                CGGC CAGC GCCG                 TCTCTTTGCTGTCTC  58 395
APT61_RS09115 1952390 .. 1952402 +  -4.7  -3.31322   CAATCATGATCTTCA                CCGGG CGG CCCAG                TTGTGCCAGCTTCAG  49 114
        ftrA 1953811 .. 1953824 +  -3.7   -5.4492   ATTAAGGCTGAGTAG               CCCGC TCGC GCGGC                TTTTTTATCTCTGTC  81 26
APT61_RS09135 NONE
APT61_RS09140 1958513 .. 1958530 + -11.3  -5.44119   TTTTATCAAAAAAAA             TCCACGC ATCG GCGTGGA              TTTTTTTCAGGTGGC 100 51
APT61_RS09155 1960932 .. 1960949 +  -9.1  -5.81412   CAATGAACACCGAAA             CGGCTCC TTCG GGAGTCG              TTTTTTTTGCATCAC 100 50
APT61_RS09160 1962109 .. 1962161 +  -5.5  -3.14211   ACGCCAGACGACCGG CAATGGGTTGCA-CTCCTGCGCGC GCCATG GTGCGCAGGGGCTGGAACTCGAGG TTACTCACCCGCAGT  49 64
        hemA NONE
        prfA NONE
APT61_RS09195 NONE
APT61_RS09200 NONE
APT61_RS09205 NONE
APT61_RS09210 1972001 .. 1972019 + -14.6  -6.12328   CCCATAAAAGCAAAA             CGGCAACC TGA GGTTGCCG             TTTTTTTTGTGTTCT 100 52
        chaB 1973701 .. 1973711 +  -2.4  -3.36823   GTGTTTAAAAATTTG                 CACG CTG CGCG                 TTAGCTTTTAAGGCG  45 58
APT61_RS09225 1974940 .. 1974952 +  -3.4  -4.25283   CACCAAAGGGGAAGG                TCAG GGGTG CTGA                TTTTGATCAAAAAAT  60 408
APT61_RS09245 1978692 .. 1978723 +   -18  -5.91981   GTCTTCAGGATAAAG      GCGTCCTGCAGTGC TTCG GCACTGCCGGGCGC       TTTTTTTTGGCTTTT 100 193
APT61_RS09250 NONE
APT61_RS09255 NONE
APT61_RS09260 1982171 .. 1982183 +  -7.7  -2.93723   CGTTACAACGTCACG                GTGAC AAC GTCAC                TCTGGTTCATCGCGG  60 518
APT61_RS09265 NONE
APT61_RS09270 1988264 .. 1988282 +  -7.5  -3.81339   TTATCGCCTGAACCC             TTTCAGG TTATT CCTGAAA             TTTCCCTTATGGCTG  69 112
APT61_RS09275 1989858 .. 1989872 +  -2.8  -3.70149   GCATATGCTTCACAT               GCAC CTTGACC GTGC               TTTCGGTGATATCAA  52 111
APT61_RS09290 1993938 .. 1993956 + -13.1  -5.47218   GTTGATTATCCGTTT             GCGCGGC CTGGT GCCGCGC             TTTTTTTAGGTCGCA 100 45
        narZ NONE
        narH NONE
APT61_RS09305 NONE
        narI 2000980 .. 2000995 + -11.8  -5.75342   CTGTTTTAATCTGAA              CCCCGC TCTG GCGGGG               TTTTTTTTCGCCCCA 100 45
APT61_RS09320 2002760 .. 2002778 +  -8.8  -3.92373   TCCTCACCCTTCGGG             TCGTTGCC TGC GGCAACGC             TTTCTCGCTACGCTC  72 381
APT61_RS09365 2005950 .. 2005971 +  -3.6  -5.66868   ATTATTACCTTTGGT           GCGGGCTT CTGCCT GAGCACGC            TTTTTTTGATTACTT  89 10
APT61_RS09370 2007097 .. 2007123 +  -6.4  -2.65815   TTTAAACGGTAGATA         GCTTTACCGCCG TTT CAGCGGCAATGC         TACTATCGGTGTACG  53 51
APT61_RS09375 2008208 .. 2008231 + -11.8  -5.61596   GCGCTAAGCAAAAAA          CCGGTGATAGC CTG GCTA-CACCGG          TTTTTTTATGGGGCT 100 53
APT61_RS09385 2010016 .. 2010029 +  -9.5  -5.63517   ACAGACATAAAAAAA               CCCGC CAAG GCGGG                TTTTTTATTTAGCGA 100 78
APT61_RS09395 2013877 .. 2013894 +  -8.3  -5.65177   TTTCAAACGAAAGAG             CGGCACC AGAG GGCGCCG              TTTTTTTGTCAATAT 100 44
APT61_RS09400 2016269 .. 2016297 + -12.3  -2.96692   AGCATTAATGGCAAT        GAGTGGGGCGGGC GAT GCTCGCCCCACGG        TGTCTACTCATCGTA  81 33
        oppB NONE
APT61_RS09410 NONE
        oppD 2019194 .. 2019216 +  -2.6  -2.90075   GCGTGCCTGCTTTAA           GCCGTACGAG GAG CTGGTATGAC           TGTCATTGACGAAAA  42 4
APT61_RS09420 2020239 .. 2020254 + -10.4   -5.4505   ACATGTAATAAAAAA              GGCTGC ATTC GCAGCC               TTTTTTATTCGCGGC 100 48
APT61_RS09435 2023132 .. 2023149 + -11.3  -5.67063   TGCACTAACAAAAAA             GGCTCCT TGTA AGGAGCC              TTTTTTTATCCTAGA 100 33
APT61_RS09445 2024425 .. 2024440 + -10.4  -5.42259   GAATAAAATAAAAAA              GCCTCC AGAT GGAGGC               TTTTTTTCGGCCTGA 100 35
APT61_RS09465 2027224 .. 2027251 + -15.8  -4.03234   ATATCGCTTCTGACG        TAAAAAAGGCCC CGAA GGGCCTTTTTTA         TTTATCTACGACCCA 100 28
APT61_RS09510 NONE
APT61_RS09515 2037711 .. 2037724 +  -3.1  -2.74523   ATTATCTGAAAATCT               TTCTG TGCA CGGAA                TAGTCTTGCCCATGC  41 142
APT61_RS09520 NONE
APT61_RS09525 2039245 .. 2039278 +  -9.9  -4.10657   GAAATAGTTGCAGAT     CAGTGAGTTAATGTTT TTT AAAC-TTAACTCATTG     TTTTCGAAAGTATAC  81 215
APT61_RS09530 2040216 .. 2040230 + -12.8  -5.52023   GCTAAAAAAACAAAA               CCCGGC ATT GCCGGG               TTTTTTCTTAATAGT 100 36
APT61_RS09545 2042890 .. 2042909 +   -15  -4.19817   TGCTGTAAATAAAAA            CGCGAGGC CAGT GCCTCGCG             TTTTGCATCAGTCGA 100 33
APT61_RS09555 2046189 .. 2046206 + -14.1  -5.49234   AACTTACCTGTAAAA             GGGCCGG ACAT CCGGCCC              TTTTTTATTGCCTGT 100 55
        cysB 2047329 .. 2047356 + -17.2  -3.62046   AAAAATAATCCCCTC        CGGTATCTTTCC TGCG GGAAAGATACCG         TTATTCCCGCCCTCA 100 33
APT61_RS09565 2051053 .. 2051082 + -12.9  -3.99775   ATAAAGCGCGTTAAT       CAGCCCGG-CACAC AGG GTGTTACCGGGCTG       TTATTGTTACTCGCT 100 37
APT61_RS09575 2052737 .. 2052747 +  -3.2  -3.04515   GGTAGTTTATAAGGC                 TGGC TAC GCTA                 TGTTGAACACTCTTT  45 121
APT61_RS09580 NONE
APT61_RS09585 2054259 .. 2054274 +  -2.4  -3.23708   CATTAAGCCGATTCG              CGGCCT GGAT GGGCAG               TAATTTTTAAAAAAA  43 7
APT61_RS09590 NONE
APT61_RS09595 2055539 .. 2055564 + -17.7   -2.7594   CGCTAAACAATAAAA         TAAGCCACGGC CGGA GCCGTGGCTTA          ATATTCTTATATTTT 100 41
APT61_RS09615 2058275 .. 2058301 + -10.9  -3.93256   ACCCTGTCGTTCGTT         GACGCCATTCT TCGTC AGAAAGGCGTC         TTCTTTAGCACTCTC  81 115
APT61_RS09670 NONE
        pspB NONE
APT61_RS09680 2072420 .. 2072446 +  -2.4  -2.64616   TCTCGCTGCGAAGCC        GTTTTCGTCAG CTTTAA CTGA-GAGAAC         TCATATGAATCAACG  39 9
APT61_RS09685 2072679 .. 2072721 +  -2.1  -4.18119   TTCTCCTGATCTCCC TATTACCTGAGCCCTTTCCTT TAT ATGGAGAGGGC--AGGTAGCA TTTCTCTGATTTCCT  57 32
APT61_RS09690 NONE
APT61_RS09695 NONE
APT61_RS09700 NONE
APT61_RS09705 2077576 .. 2077602 +  -2.9  -3.04517   AAGTGGTTTGACCGC         CGGTGGCGTTA AGGGC TAAGGCGGCCG         ATTTTAACAAGGAGT  43 7
APT61_RS09710 NONE
APT61_RS09715 NONE
APT61_RS09720 NONE
APT61_RS09725 NONE
APT61_RS09730 NONE
APT61_RS09735 2084589 .. 2084608 + -10.8  -5.82172   TAATAAGCGTGTTGG            CCGGAAAT GCGA ATTTCCGG             TTTTTTTCTGTTAAT 100 38
APT61_RS09740 2085567 .. 2085586 +   -15  -4.07568   CTGACAGGCTGCTTA            CCAGGGGC TACG GCCCCTGG             TTTTAACGAACGGAG 100 37
APT61_RS09750 NONE
APT61_RS09755 2089238 .. 2089259 +  -9.5  -3.08867   TCATGAGGTTCACAA           GCTGTCAAT ATTT GTTGACAGC            TATCTTCCCGATTAC  69 66
APT61_RS09760 2090878 .. 2090893 + -10.4  -4.95618   AGTAAAAACAAAAAA              GCCTCC GCAG GGAGGC               TTTCTTTTTGGTCTT 100 36
APT61_RS09770 2092779 .. 2092795 + -10.1  -4.58395   CATAGCGCCTCCGTT              TCCGGCT CCG AGCCGGG              TTTTTCACCGGTCAA  90 320
APT61_RS09780 2095035 .. 2095064 + -20.9  -3.41569   ACCTCTCCTAAAAAC       GAAACTGGCGCGA TTCT TCGCGCCAGTTTC        TCTTTCAGTCGCTGA 100 70
APT61_RS09790 2097219 .. 2097230 +  -2.2  -3.90762   CCTCTTCGAGCCGTT                CGAGC GAC GC-CG                TATTTTTAACCCCTC  52 109
APT61_RS09795 2097808 .. 2097825 +  -4.9  -2.87683   GAAAATGATAATGCA             TGATAGC GTGG GTTATCA              TGTCTGCACAGGTAT  47 44
APT61_RS09800 NONE
APT61_RS09805 2100203 .. 2100221 +  -3.8  -2.57132   ATAAGGCAGGAGCAG             GGATGAAA ATC TTTCGCCC             GTTATGGGAAGACGG  44 37
APT61_RS09810 NONE
APT61_RS09815 NONE
APT61_RS09820 NONE
APT61_RS09825 2104420 .. 2104439 + -13.6  -5.52384   CGCGTAATGACCCGG            GCAGACGG TTTT CCGTCTGC             TTTTTTTGCTGAGCG 100 34
APT61_RS09830 NONE
APT61_RS09835 2107820 .. 2107836 +  -2.9  -2.79183   TTTTTTTATTCTCCC              TCCCTTT ACT GACGGGA              TGTCCTGGGGATCGA  42 74
APT61_RS09840 NONE
APT61_RS09845 NONE
APT61_RS09850 NONE
APT61_RS09855 NONE
APT61_RS09860 NONE
APT61_RS09865 2117275 .. 2117293 +  -2.4   -3.8637   ATGGGGTTAGAAGTC             TCTTGTCT TAT GGATAAGG             TATTTTGTCCTGTGC  52 233
APT61_RS09870 NONE
APT61_RS09875 NONE
APT61_RS09880 2123607 .. 2123621 +  -2.1  -2.91383   TTGCCATCGATCCCG              GCA-GG TCCG CCGTGC               TCTGTAGCTGACCCT  40 0
APT61_RS09885 2125407 .. 2125422 +  -4.6  -2.63631   GAAAGAAAATCACAG              TCCGCG CCTG CCCGGA               TGATGTCGCAGTTAC  46 7
APT61_RS09890 NONE
APT61_RS09895 NONE
APT61_RS09900 NONE
APT61_RS09905 NONE
APT61_RS09910 2129370 .. 2129410 +  -4.5  -3.72989   AGCGTTTTTTCAGGG  CTGTAGACAGGCTGGCCTG AAA CCGACGAGCCTGTCCAGGG  TTTCACTATCGATTT  57 6
APT61_RS09925 2133011 .. 2133026 + -10.4  -5.36441   GCATCCGAGATAACA              GCCTGG TTCG CCAGGC               TTTTTTGTGTGCCAG 100 45
        zntB 2134334 .. 2134353 + -12.2  -5.82316   ATTGATTCGTACGAC            GCCGACTT AAAT AAGTCGGC             TTTTTTTTGCCTGCT 100 215
APT61_RS09935 2136009 .. 2136048 +    -7  -2.57192   TGAAATAAGCGGGCG  GGGGAGAGCGTCTCAGCG CTGG CGCTGAGACGCTTAACAA   TCACTTCACTTCAAT  56 33
APT61_RS09945 2138088 .. 2138102 +  -2.7  -4.08394   GGCTGGCTTACACTT               AGCCG GTACG CGGCG               TTTTGCCGCCCGTGT  56 59
APT61_RS09950 2138966 .. 2138989 + -16.8   -4.2558   AAGAATATAAAATGT          TAGCCCGCGT CGTA ACGCGGGCTA           TTTTCATCAGAACTG 100 431
APT61_RS09970 2144862 .. 2144892 +  -8.4  -3.44284   GGCGGTGCCGTCAAT      GCTTT-GCAGCAC AAAGCG GTGCTGCTGAAGC       TGTTCTTCCTGCACG  64 323
APT61_RS09990 NONE
APT61_RS09995 NONE
APT61_RS10000 2150242 .. 2150292 +  -3.1  -4.82667   ATGCCCGCCAGCTTT TCGTCGTCGCGGGTGCTGCGCAGC ATCT GC-GCACAGAGATCCAGACGACGA TTTTTAATGTACTGC  73 141
APT61_RS10010 2152780 .. 2152797 + -11.3  -5.18355   TAGGTAAAAGCAAAA             CGGTCAC CGAG GTGACCG              TTTTTAGTTTTTGCA 100 38
        paaA NONE
        paaB NONE
APT61_RS10035 NONE
APT61_RS10040 NONE
APT61_RS10045 NONE
APT61_RS10050 NONE
APT61_RS10055 NONE
APT61_RS10060 NONE
APT61_RS10065 NONE
APT61_RS10070 NONE
APT61_RS10075 2167996 .. 2168029 + -12.5   -2.8511   CGGCTAACCCCGGCC     TGC-TGACCCTCTCCG TAT TGGGGAGGGTCACGCG     TCTGGTGCTATGCTA  80 34
APT61_RS10080 2169015 .. 2169025 +  -3.2  -3.00022   CGCCTGCGTAAAGGA                 GGTA ATG TGCC                 TGTATATCAAATCGA  45 30
APT61_RS10085 2169707 .. 2169723 +  -5.1  -2.81312   ATAGTGCGTAATTAG              GGTGTTG ACT CAGCATC              TATAATGAGTAAATT  49 115
APT61_RS10125 NONE
APT61_RS10130 2184107 .. 2184118 +  -2.2  -2.71924   ACGGTCAGCCTTGTC                TGGT TCTT ACCG                 CTTTAGGGGGCGCTA  39 8
APT61_RS10135 NONE
APT61_RS10140 NONE
APT61_RS10145 2186161 .. 2186175 +  -7.8  -3.64609   TTATGCCGCTACCAG               GCTGTC AAT GGCAGC               TTTCGCATCGTTCTG  68 53
APT61_RS10155 2191246 .. 2191279 +  -5.1  -3.60792   GGAGAACACCGGACC     CTGGGTCGGGCAAGCG TAG CGCC-GCCCGACGGGG     TTTAACCGTTCACCA  56 414
APT61_RS10185 2198881 .. 2198920 +   -13  -4.33248   CTCTCTGTTGTAATG  CATTGCCCGTTTGCGATGA CTT TCC-CGCAAACGGGCAATC  TTTGTTGTCAGGTTG 100 28
APT61_RS10190 2200527 .. 2200547 + -14.7  -2.92668   CATAAGACAAAAAAA            CCGGGCCAG TTA TTGGCCCGG            TATAATTAGATCATG  91 36
APT61_RS10215 NONE
APT61_RS10220 2206865 .. 2206875 +  -8.2  -3.80535   CGCCGGTTTGCGACC                 GCCG CCC CGGC                 TATTTTGTCCGCCTT  73 450
APT61_RS10240 NONE
APT61_RS10245 2210614 .. 2210643 + -12.9  -2.61144   GCCTCTCCCTTGAGG       GTCAGGGCGTTGT TCAC GCAACGCCCTGAA        ATATTTACAAAATAA  81 79
APT61_RS10250 2211395 .. 2211419 +  -7.9  -3.50832   GGCTTCCTCTCTGTG          GCGGTAATGCT GGC AACATTACTGC          TCTTTAGCTTTCACG  66 213
APT61_RS10255 NONE
APT61_RS10260 2212673 .. 2212712 + -12.8  -4.15061   GGCGCAATGTTGCGG  TCAGGTGGCCGCCCGG CGCATGTT CCCGGCGGCCCCTTGA   TTTCTCTCTGAATTC 100 129
APT61_RS10265 2214401 .. 2214421 +  -7.5  -4.43397   GTATAAGTGTAAAGG            GGGGGCC TGCTTTT GGCCTCC            TTGTTTATTTTGCCG  76 342
APT61_RS10275 2216192 .. 2216210 +  -5.2  -3.01791   CAAATCAGCGCGAGA             TGGCTCAG GCC CTGGGGCA             TGTTGCCGACCCACT  48 99
APT61_RS10290 NONE
APT61_RS10295 NONE
APT61_RS10300 2222652 .. 2222675 + -13.2  -4.08692   GTAAAAAGAATAAAA          CAGCAGCAGT TGGG GCTGCTGCTG           TTTTGAAACGCGTTA 100 37
APT61_RS10310 2224537 .. 2224550 +  -6.7    -4.946   TGGACGCGCATAAAC               GCCAT CCTG ATGGC                TTTTTCATCTTTCAT  83 184
APT61_RS10315 NONE
APT61_RS10320 2227118 .. 2227153 + -18.6  -2.52795   TGAGCAGGTAAAAAG    T-GCAAAACAGCAGCTG ATA CAGCTGCTGTTTTGCTA    TAGGTTAACGCGGTT 100 80
APT61_RS10340 2231634 .. 2231653 +  -8.6  -3.55202   GCGTATCGCACCGCA            GCCTATGGC TTC GCCAT-GGC            TATTCTTTGCCAATA  66 474
APT61_RS10350 2233023 .. 2233044 +  -5.7  -4.58395   GAACAGCACCAGCGA           GGCCACACG TTTG CTGGTGGCC            TTTTTACCCGATACG  75 361
APT61_RS10390 2240353 .. 2240389 +  -6.7  -3.52906   CGTAACGCCTGATGA  CT-C--TGCCGCACGCGG GCGA CCGTGTGCGGCACTGGAG   TATTTATGCAAATCC  61 29
APT61_RS10395 NONE
APT61_RS10400 NONE
APT61_RS10405 NONE
APT61_RS10410 2244090 .. 2244103 +  -5.3  -3.35996   CCGGGAGACCCTGGC               CATCA AGGA TGATG                TTATAGCTCCCAATC  53 436
APT61_RS10420 2245527 .. 2245548 + -11.6  -3.72893   TGCTGGCCTTTAATT           GTCCGCCT CTACAA AGGCGGAC            TTTGCTGACAAGATG  85 523
APT61_RS10435 2248527 .. 2248552 +  -6.9  -4.55295   ACAGTAATAACGTAT         CGTCCGCTT-TG TGC CAGAAGCGGACC         TTTATTTGTAAAAGA  77 132
APT61_RS10445 2250411 .. 2250442 +  -9.5  -3.10796   TAAACAACATGTTTT      GCGGACATCTGTT TAAGCT GGTAGATGTCCGC       TATTCGCTCATCGCG  70 72
APT61_RS10475 2256735 .. 2256784 +  -4.2  -2.71263   TAAGGCAAAGAATTG CGCCTGACAACCGTATACAGGCA TAGAC TGCG-GTGGCTGGATGTCAGGCG TAATTAGGCAGAGTT  44 38
APT61_RS10480 2257326 .. 2257338 +  -3.3   -2.9462   TTTTTTTGAGCGATA                ACACG TAA CGTGC                TGCTTTAGCTCAATA  45 25
APT61_RS10485 NONE
APT61_RS10490 2257980 .. 2258008 +  -5.9  -2.80622   AGCATTAATGTTCGC        GCAAACTGCCCTT AAC AAGGGCAGTGACC        TCTCCTGAAGTGTCT  52 40
APT61_RS10495 NONE
APT61_RS10500 2259580 .. 2259616 + -11.6  -4.42806   ATAACTGATCAAATC   TTTC-TCCCGCTGCGCC TTCA GGGGCAGCGGGACGACA    TTTCTTTAAAAATCA  93 33
APT61_RS10505 2261476 .. 2261499 +   -14   -5.7946   CCTCTTCCGGCAAAA          GGGTTCATGT TCCG ACATGAACCC           TTTTTTTATTCCCCG 100 64
APT61_RS10510 2262016 .. 2262035 +   -15  -3.14136   TGAACACAAAAAAAA            CCGGCCAC TGAT GTGGCCGG             TTCAGTGATTACTGC  91 38
APT61_RS10525 2267223 .. 2267233 +  -2.4  -3.83026   GAAGAACGCAGCAAG                 CGGC GTT GCGG                 TTTGCTCTGAAAACG  52 5
APT61_RS10530 2269023 .. 2269041 +  -6.6  -4.56597   GATTTTTGTGCATGA             CAGGCGGC TGC GCGGTCTG             TTTTTCCAGCCACAG  78 254
APT61_RS10540 NONE
APT61_RS10545 2271706 .. 2271733 + -15.6    -5.252   ACAATTACCCTTTTA        GCCCCTGCCG TTGATGTC CGGCAGGGGC         TTTTTTATACCCGTC 100 43
        mdoD 2273624 .. 2273634 +  -5.4  -2.52896   ACGTCAGTACGTAGA                 TGAC CGC GTCA                 TGCGTTAAGGCATAA  48 7
APT61_RS10555 2274301 .. 2274328 +  -9.8  -3.27923   TAATGCGCCCAGCAA        CGGCGTGC-GCGT AAT GTGCTGCGCGCCG        TTAATCATCTTCGCG  73 38
APT61_RS10565 NONE
APT61_RS10570 2276993 .. 2277019 + -15.2   -3.8374   GCTTAACCCTGCTTG         CTCCCTCTCTCT GTG GGAGAGAGGGGG         TTTAAGATTTTTTCA 100 35
APT61_RS10575 2278064 .. 2278081 + -11.3  -5.67967   AAGTAAAATAGTTAA             GGGACTC GTAA GAGTCCC              TTTTTTTATGCTACT 100 40
APT61_RS10600 2284132 .. 2284154 + -13.4  -6.38655   AATAAGCGTTTGATT           CTGCCCGCCA TTT TGGCGGGCAA           TTTTTTTTTCTCTTT 100 36
APT61_RS10605 2284948 .. 2284970 + -14.9  -5.94713   AAAATAATATCGGGA           CCGGCCTGT ATTCC ACAGGCCGG           TTTTTTTTATGCCGT 100 34
APT61_RS10615 2287203 .. 2287220 +  -4.1  -3.74693   AAAAACCCCTGCCGC             CGCTG CAGCCAGC CAGCG              TTTACTGGCATCCGG  54 296
APT61_RS10625 NONE
APT61_RS10630 2290760 .. 2290800 +  -5.5  -3.44206   CGCAAGTGAGTATCC GGTTTGCGCG-ACTTC TGCCAGTAAT GATGTTCGCGCAAGCC  TTCTGCTGACTCTTC  54 45
APT61_RS10665 2299418 .. 2299438 +  -6.8  -5.88565   TTATCCTGTTAATAA            CGCCGCAA TTAAT TTTCGGCG            TTTTTTTATTGTCGC 100 82
APT61_RS10670 2300781 .. 2300793 +  -5.5  -2.70932   TTCAGGACTACATTG                CCATC ATG GGTGG                TCGTTAAGCGCCAGG  48 6
APT61_RS10675 NONE
APT61_RS10680 NONE
APT61_RS10685 NONE
APT61_RS10690 2305020 .. 2305075 + -11.5  -5.51402   GTAATGTTTAAACAT TAATG-ACTTATCACCGCCGGTAGAGA GAAA TCTC-ACCGGCGGTGATAAATATATTC TTTTTTTGAATATAT 100 23
APT61_RS10695 2307125 .. 2307136 +  -7.2  -3.41738   GGCGTTTGAAAATTC                CCGC AGGC GCGG                 TGTCTTTGTTCCAGA  58 491
APT61_RS10710 2309030 .. 2309047 +  -7.7  -4.45083   TCCCCAGCGCGGCAT             GCAGCTGC GCG GC-GCTGC             TTTTATCGGTATCGA  78 367
APT61_RS10730 2317209 .. 2317221 +  -7.7  -2.72144   GCCAACAACTAAGGA                GTGAC AAT GTCAC                ATTTAGAGGACGTCA  58 129
APT61_RS10735 NONE
APT61_RS10750 2319173 .. 2319184 +  -2.2  -3.02698   AGGGATCTACAGCTA                GTCT CTAA GGAC                 ATTTGTGTAAAATGG  42 56
APT61_RS10755 2320450 .. 2320475 + -12.7  -4.28375   TCACGCGTCGCTTCA         CGCCTTTTGCCC TTT GGG-AAAAGGCG         TTTTGCATCTGTTAC 100 227
APT61_RS10760 2321222 .. 2321253 +   -13  -3.39895   ACCGCTTCGCTTGTT      TATTCCCGGCAGAC GATC GCCTGCCGGGAAAA       TTAATTACTCAAAGC  87 77
APT61_RS10770 2325037 .. 2325077 +  -5.4  -3.24017   TGGGGAGAGGGTTGG GGTGAGGGGAACATGCGGC TCAG GTGGCG-GTTCCGTTCACC  TTAGGTTCTGCACTT  52 365
APT61_RS10780 2326637 .. 2326664 + -11.4  -5.36441   GGGGGAGCACATATA        AAAAACGGTCAC CTGA GTGACCGTTTTG         TTTTTTATCTGGACG 100 72
APT61_RS10790 2329653 .. 2329685 + -12.6  -3.65314   TAAGCCAGACCCAGG      CCAGCCTCAGCGGC ATCCA GGCGCTGGGGCAGG      TTATTCAGGGTTAAC  84 205
APT61_RS10800 2331055 .. 2331065 +  -6.8  -3.53224   ATAAAGCCGCCCCGG                 GAGC AGC GCTC                 TTTCAGCGCACCGTC  60 205
APT61_RS10820 2335898 .. 2335912 +  -7.8  -2.75498   AGAGCTTCGTGCCTC               GCGCTA ACC TGGCGC               CTTATATCTGAAATC  59 19
APT61_RS10825 NONE
APT61_RS10830 NONE
APT61_RS10835 NONE
APT61_RS10840 NONE
APT61_RS10845 NONE
APT61_RS10850 NONE
APT61_RS10855 NONE
APT61_RS10860 NONE
APT61_RS10865 NONE
APT61_RS10870 2344436 .. 2344463 + -12.8  -2.70315   TATTCGATGTAAAGG        CGAAACGGTAAC TCAG GTTACCGTTGCG         TGCGTTTGCTCTCTC  81 29
APT61_RS10875 NONE
APT61_RS10880 NONE
APT61_RS10885 NONE
APT61_RS10890 NONE
APT61_RS10895 NONE
APT61_RS10900 NONE
APT61_RS10905 NONE
APT61_RS10910 NONE
APT61_RS10915 NONE
APT61_RS10920 2355833 .. 2355846 +  -2.4  -3.14132   GATCGTTTAGTCGCA               CGAA TAGCGC TTCG                TTCCTGGAGGAGAAG  41 395
APT61_RS10930 2357271 .. 2357282 +  -2.2  -3.40775   GGAAAAACCGCTCAC                GTGG AACT TCAC                 TGTTTCCCTGGGGGT  45 234
APT61_RS10940 2359286 .. 2359306 + -12.6  -2.68491   TGATCTACATACCTG            CACGCGCT ACCCC AGCGCGTG            ATTGTCGTGTCCATT  81 98
        fusA NONE
APT61_RS10950 2362448 .. 2362465 +  -2.5  -4.36914   CGCTGCGCTCAATCA             GCTCCCG CGAC CAGGTGC              TTTTATCCACCACGA  62 402
APT61_RS10960 NONE
APT61_RS10965 2364443 .. 2364456 +  -9.5  -3.03619   CTTATAATCACGTGA               CGGGG GCAA CCCCG                TCTTCAGGACTGCTT  69 34
APT61_RS10970 2366217 .. 2366246 + -12.1  -3.23447   GCTGCGTCTGCACAC       CCCGGTCGCTTAC TCAA GTAAGCGCGCGGG        TGTTCTCAGACTTGC  82 114
APT61_RS10975 2367179 .. 2367192 +  -9.5  -3.09452   AAAATAAAACGGGAA               GGGGC GTAA GCCCC                TCTCTGTTAGCCGAT  69 34
APT61_RS11020 2378451 .. 2378508 +  -5.7  -2.95204   AGCGGTAAAAAAAAC GCCCG-GCGGCGCGGTATACTCCCTTTCCC TGT GGGAGAGGGC--A-ACCG-GCCGCACAGGC GTTATTTACGACTCC  53 33
APT61_RS11060 2386090 .. 2386118 +  -7.4  -3.02263   GGCAACAGGCCGCAC       CGCAG-CACCATC GACG GGTGGCGGCTGCG        TCTTACCCCGCCTGT  59 56
APT61_RS11065 NONE
APT61_RS11070 2389139 .. 2389165 + -22.4  -5.11112   TGGTGATTGTTATCA         GGCTACCTGCCG CGT CGGCAGGTAGCC         TTTTTCTTCAGATTT 100 35
APT61_RS11075 2389900 .. 2389926 + -22.4  -5.11112   TGGTGATTGTTATCA         GGCTACCTGCCG CGT CGGCAGGTAGCC         TTTTTCTTCAGATTT 100 35
APT61_RS11080 2390666 .. 2390688 + -19.2   -4.2231   GTAATTGTTATCAGA           CCACCAGCCG AAG CGGCTGGTGG           TTTTCGCTACTCCTT 100 37
APT61_RS11090 NONE
APT61_RS11095 NONE
APT61_RS11100 NONE
APT61_RS11105 2396479 .. 2396506 + -12.7  -4.41548   TCTGCGGGTGCAGTA        CCCGCTCCGGG AAGGGA TTCGGAGCGGG         TTTTATAGGATGTCA 100 83
APT61_RS11115 2398960 .. 2398973 +  -4.5  -3.53091   CCGTTCCATCAGCCT               CTGGT CATG ACCGG                TTTACAGAACGCGCT  55 86
APT61_RS11165 2409883 .. 2409903 +  -4.6   -5.1675   CCACCGCCGTCACGA           CC-GCGGCG TGGG CGCCACCGG            TTTTTTCCTGAATAA  83 372
APT61_RS11175 2411462 .. 2411488 + -16.6  -4.26076   GCCGAAGTAAAAAGA         TGCCCGGCGG CGGCTAC CCGCCGGGCA         TTTTCCTACAGCTGC 100 31
APT61_RS11185 NONE
APT61_RS11190 2415353 .. 2415365 +  -4.1  -3.05463   TCTCAATGACTGAAG                TGGAA AAG TTCCG                TTCACTAAAGCCCCT  47 153
APT61_RS11215 2419503 .. 2419524 + -10.9  -2.52676   CTGAACTGATCCTTC           T-GCCGGGCA TTA TGCCCGGCTA           TCCCTTCACCGCCTC  72 32
APT61_RS11225 2421325 .. 2421342 +  -9.1  -2.62184   TAAAGTAGGGTAAGG             TTGCCGC CGAG GCGGCGA              TCCTGTAACGGACGG  63 47
APT61_RS11235 2423720 .. 2423738 + -10.2  -3.03771   TCTCAATGTTTAACA             GGGCCGAA ATA TCCGGCCC             TGTTGCGCAATATAA  72 79
APT61_RS11240 2425571 .. 2425592 +  -8.7  -4.98672   TATGCTTGAAGTTCA           TGCGC-GGCG TCA TGCCTGCGCA           TTTTCTCTTTTTCCC  88 177
APT61_RS11245 NONE
APT61_RS11250 NONE
APT61_RS11255 2432075 .. 2432102 + -14.2  -2.67515   GCGCGGGGTTACTTG        CCAGCCCGTG CTCTTTCC CACGGGCTGG         TGGTCTCGTCGTCGA  88 42
APT61_RS11265 2433199 .. 2433227 +  -2.3  -3.49756   GTGAGTGTTTAACCG        CGGATGGATGTTT TTG AAACGCCGTTCCG        TTATAATGCTTCTTC  47 29
APT61_RS11270 2434524 .. 2434547 +  -3.7  -3.64822   ACGCAGCCTGTAAGA          CGGGCAAGC CTCTTT GCTCCCCCG           TTTGGGTAGGGGCGT  53 28
APT61_RS11275 2435411 .. 2435446 +  -8.2  -2.71791   CAACGCCAATGTAGA    GGCGGGTATGGGTTGGT TTC ACCACCCCG-GCCCACC    ATTTCGCCAGCACGT  54 278
APT61_RS11290 2437907 .. 2437919 +  -6.9  -2.60496   GCTGCTGTATACCTT                CCGGG GGT TCCGG                CTGTTTAGCAGGAGA  53 191
APT61_RS11310 NONE
APT61_RS11315 2446636 .. 2446648 +  -3.5  -4.53685   AATTCTTTACAATTG                TAAAT GAT ATTTA                TTTTCATTATCATTT  66 100
APT61_RS11320 NONE
APT61_RS11325 2449774 .. 2449793 +   -15  -3.31176   GTTCTGATCCCACTG            CCGGAGCC TGCT GGCTCCGG             TCTCTTCTCTTGTTA  93 34
APT61_RS11330 2451098 .. 2451117 +   -15  -4.65916   CCCGGTAAAGCAAAA            CGGGTGGC AAAG GCCACCCG             TTTTGTTGCCGTCAG 100 44
APT61_RS11345 NONE
APT61_RS11350 NONE
APT61_RS11355 NONE
APT61_RS11365 2458109 .. 2458151 + -17.9  -3.14132   GCACATTGAGTTTTC CTGCTATTACGTCAGCATG CTGCT CTTGCTGGCGTAATGGCAG TTAATACGAAAACGA 100 136
APT61_RS11410 NONE
APT61_RS11415 2464533 .. 2464549 +  -2.1  -3.67877   GCACGCCGATCACCA              CCAGCCC CTG GGCCTGA              TATTTGTTGGCCCAT  51 289
APT61_RS11485 2481362 .. 2481399 +  -5.5  -3.36273   GGCTGGCTGATGCCG   GTCTCCAGGCGCAG-GGT ATG ACAGCTGCGGCTGAAGGC   TTCATCTTCCAGCGC  53 124
         ldh 2482980 .. 2482995 +  -2.4  -4.21607   CGTTGGCAATCAAAT              CCCGCT TCAG GGCGGC               TTTCTCTTCGGTCGG  59 211
APT61_RS11515 NONE
APT61_RS11520 2488017 .. 2488032 +  -4.6   -3.1505   AAGAATACCGGGTAC              CGCTGG GTGC CCAGGG               TTCCTACGCCCTGAT  50 62
APT61_RS11525 NONE
APT61_RS11530 2490631 .. 2490642 +  -2.2  -3.31248   GAGTGGGTGAAGGAG                TCGC AACA GTGA                 TTATCGGCCATCTTA  45 14
APT61_RS11535 NONE
APT61_RS11540 2491801 .. 2491834 +  -8.7  -3.09671   TGAGTGATGCGGTCT     GTTTGCCGGGGGGGG CACG CCTTACCCGGCCGAC      TATTCGGGTTGCCGT  64 38
APT61_RS11545 2492557 .. 2492567 +  -2.4  -4.10855   AGAGACCTGCCGCGC                 CTGC AAC GCCG                 TTTTGCCCAGCTTTT  59 142
APT61_RS11560 2495731 .. 2495777 +  -9.2  -3.98915   ATCGTACCCGGCCCA GCGGTACTGGGCATCGCCAGCG GCA CGAAGGCGATGTTCGGGGCCGG TTTGCTGTGTTTATC  78 342
APT61_RS11570 NONE
APT61_RS11575 2497316 .. 2497329 +  -3.8  -2.73771   TGGCAAATAAAACAC               CCTG GTGGGA CAGG                CTTTAAGACGTATCG  44 128
APT61_RS11580 2497577 .. 2497594 + -14.1  -5.79526   CGCCTGATACGTTTT             GCCCCGC CCGT GCGGGGC              TTTTTTTTAGCCTCT 100 34
APT61_RS11590 2499940 .. 2499953 +  -5.3  -4.59853   CCGATAAGCAAAGAA               GATGA ATGT TCATC                TTTTTACGCAATTAC  73 78
APT61_RS11655 2510641 .. 2510665 + -17.3  -2.80053   CCAAATAAAGACGCA          GTCAGCAGGAT TTA ATCCTGCTGAC          ATTCTTACCCTGTCT 100 33
APT61_RS11660 2511367 .. 2511379 +  -7.7  -4.16943   AGCGGATTGTGTAAT                TGACG CCG CGTCA                TTTTCAGCTCTGACG  75 23
APT61_RS11675 2515049 .. 2515065 + -10.8  -2.94032   TTTGAGTACAAAAAA              CCGGGC ATTGC GCCCGG              CTTTGCTTCCAGCCT  74 101
APT61_RS11685 2518023 .. 2518033 +  -5.4   -3.3422   GCCGGTCTGAGCGTC                 CATC GCG GATG                 ATTTTTCCAGACCTG  54 14
APT61_RS11690 2518816 .. 2518848 + -10.6  -2.90322   AGCGAAGAGTAATGA     TTGC-GCATCCCGAC CCGG GTCGGGATGCAGCGC      GTTATTATCGTACGA  71 29
APT61_RS11700 2519825 .. 2519838 +  -3.7  -3.85817   GCGTATTGTGCGACC               GTGGC TTTC GCCCC                TTTCTCCAGCAGAGT  57 98
APT61_RS11730 2526146 .. 2526165 +   -15  -2.81702   CTCTGCCCGACCTTA            CCGCGCAG CCTG CTGCGCGG             TGCTTAGTAGTATTC  90 42
APT61_RS11740 2527313 .. 2527323 +  -8.2  -4.75288   TCCCCCGCCCGGGCG                 GGGG AAT CCCC                 TTTGTTTTGATATAC  88 47
APT61_RS11745 NONE
APT61_RS11750 NONE
APT61_RS11755 NONE
APT61_RS11760 2532250 .. 2532266 +    -5  -4.18018   CCCTGCTCCCGGTCG              CGCACC ATGCC GGGGCG              TTTTCCGTCAGCCAG  64 268
APT61_RS11805 2543808 .. 2543837 +  -2.2  -3.86346   CCCCTCCTTGCATTG       CATGAGTTCTTT CCGATA AAAGGCTTCATG        TTTATGGAAACGTGC  53 233
APT61_RS11815 NONE
APT61_RS11820 2547470 .. 2547511 + -11.9  -5.40072   GTACTATCACGACCA TATTTAGTCGATC-CTCATT TAC AGAGAGTGATCGACTAAATA TTTTTTTCAGGCGAC 100 178
APT61_RS11830 NONE
APT61_RS11835 NONE
APT61_RS11840 2550606 .. 2550633 +  -9.2  -5.21683   TTACATTAATAAATG        TCCGCCAGCA TCACTTCT TGTTGGCGGA         TTTATTTTTTTAAAT 100 32
APT61_RS11855 2553412 .. 2553428 +  -7.3  -2.58999   TCAACGATGTTCGCT              TTTCGCT CAA AGCGGAA              CTTGATGTCTCAGGG  56 314
APT61_RS11885 2558956 .. 2558971 +  -5.4  -5.67967   AATCCAATCACTAAG              CCATCT GTAA AGGTGG               TTTTTTTATGCTCAT 100 55
APT61_RS11935 2572732 .. 2572752 + -13.3  -3.85698   CTCACATCAACTGAC            GTGGCGCTG GTA CAGCGCTAC            TTTCTCGACCGGGAA  95 308
APT61_RS11945 2575550 .. 2575560 +  -4.6  -5.46706   GCAGAGACAGCGATC                 GCTG CTC CGGC                 TTTTTCTTTTCCGCT  90 335
APT61_RS11955 2576714 .. 2576735 +  -5.1  -3.06312   ATTCATTCCTGACGG           CCGGGTAGT GATG GCTATTCGG            TTAAATCAACGCTTT  51 40
APT61_RS11960 2579237 .. 2579255 +  -9.5  -2.72049   TGATAGTAACAACTA             CCGCCTG CAAGA CGGGCGG             TAGTTGACAGATATC  66 38
APT61_RS11965 NONE
APT61_RS11970 2580143 .. 2580166 +  -3.8  -4.18018   TCGACATCTAGCGGA          TGTGCCGC AACGCGCG GCAGCACA           TTTTGGCTGCAACAC  62 30
APT61_RS11975 2580579 .. 2580606 + -17.8  -5.71712   ATCACCGATCCTGAA        CGCCGTAAGCAG AAAA CTGCTTGCGGCG         TTTTTTTATGTGGAA 100 56
APT61_RS11980 2581165 .. 2581179 +  -4.3  -2.71712   ATTCCTCTCGACTAA               GAAGA TGAAT TCTTC               GTTTAGGGAGAGAGC  44 26
APT61_RS11985 2582096 .. 2582129 +  -9.6  -3.60475   GTGAGCATCCCGCGC     CGTCTCGCGATTGC GACACA GTAGTCGGGAGACG      TTTCGCGTCCGGGTT  74 37
APT61_RS11990 2583053 .. 2583083 + -17.2  -3.81488   TCATAAACCACATCC       TTTCATTAAGTGAC GGT GTCACTTAATGAAA       TTATCTTTAAGACAA 100 35
APT61_RS11995 NONE
APT61_RS12000 NONE
APT61_RS12005 NONE
APT61_RS12010 2586741 .. 2586757 + -15.1  -3.47526   GAGTTAATGTTGTAA              GCCGGGC ACT GCCCGGC              TCTTTACGTTGCTAA 100 34
APT61_RS12015 2588258 .. 2588315 +  -6.3  -3.15579   GATACGGTTTGCCAC CCA-GCCCACCAG-CGGCA--GGCCGTCG TTGG CGATGGCCTGTGCCGTCAGCAGGGCGTGG TTGATACAGCCTTCC  57 149
APT61_RS12035 2592523 .. 2592580 +  -9.3  -3.13403   ATTAATGTTGCGTGG CCTCGTGTTTCGCTTCACTGGATGGT ACTTTTA ACCATCAGTTGATGC-AGACACGAGG TCTTAATGGAAAAGA  67 36
APT61_RS12040 2594175 .. 2594187 +  -6.9  -3.05384   TAGTTCTTTCAACGG                CCCCG CAG TGGGG                TTAAATGAAAAAACC  55 130
APT61_RS12045 2594653 .. 2594682 + -14.4  -4.96848   CGGGCACGTTGGTCC       CGGCGCT-GAACC GGCAA GGTTCCAGCGCCG       TTTTTCTGTGCGGAG 100 66
APT61_RS12050 2595707 .. 2595728 + -11.6  -2.59564   CTGGAAGAGCTGGCC           CGGCAGTG ATCTAA CACTGCCG            CTTCTGGCGTAACGC  75 17
        tqsA 2600150 .. 2600176 + -10.9  -3.61517   GTTCGCCCCGCCTGT        C-GGTAGTCGGC CAGT GCCGACTGCCAG         TTGTTAAACGGCAGT  74 77
APT61_RS12090 2604340 .. 2604352 +  -3.3  -2.94099   CCGCGCTTAACTTCC                CCTGG ACG CGAGG                TGTGTAATGCAGCGC  45 6
APT61_RS12095 2605781 .. 2605793 +  -7.7  -2.77043   CCGATCCCAGAAAAC                GTGAC ACC GTCAC                CTTTAAAATAATAAA  59 2
APT61_RS12100 NONE
APT61_RS12105 NONE
APT61_RS12110 NONE
APT61_RS12115 2609925 .. 2609943 + -17.4  -5.83822   ATTAACAGTAAAAAA             GCCCGCCG TAA CGGCGGGC             TTTTTTTTAGCTCTC 100 36
APT61_RS12135 2615616 .. 2615632 + -11.5  -6.11019   AAACCTATCCCCAGA              GGCGGCG TAA TGCCGCC              TTTTTTTTGCTTTTT 100 43
APT61_RS12140 NONE
APT61_RS12145 2618228 .. 2618241 +  -3.7  -3.72576   ATTAAAACCACCAAT               GCGCC TATC GCCGC                TTTAATAAACAACCC  54 326
APT61_RS12155 2619111 .. 2619152 + -14.4  -2.56432   GATATCTGACCCCCT CAGCCCGCATCGCCAGAA TACCTT TCCCGGCAATGCGGGCTG  CTTCCTGCTGTTGAA  87 32
APT61_RS12160 NONE
APT61_RS12165 NONE
APT61_RS12170 NONE
APT61_RS12175 2623468 .. 2623491 +  -6.7  -2.89971   TGACTGAACCAAACC          GCACGC-TGG CCTGA CCGGGCGTGC          TGTGCTATATAATGA  54 34
APT61_RS12180 2624561 .. 2624576 +  -4.6  -5.04385   CGGCTTTGAGCGTCA              GCCCCT CTTT ATGGGC               TTTTTTCGCGATCTC  83 124
APT61_RS12195 2629096 .. 2629117 + -13.7  -4.20136   AATCTTATGACCTCA           CCGGGCGGT TTTA ACCGCTCGG            TTTCATTTTAGGGAT 100 83
APT61_RS12200 2630716 .. 2630730 + -11.4   -5.4505   AGTAATGATAAAAAA               CCCCTC TTC GAGGGG               TTTTTTATTGCCGCC 100 36
APT61_RS12210 2633591 .. 2633609 + -12.4  -5.07652   AAGCCTGATGCCTCA             CCCCCTCG CCA TGAGGGGG             TTTTATTTTAAGGAC 100 33
APT61_RS12215 2635287 .. 2635311 +  -9.3  -4.68655   GTAAGAGTAGTTGCT          CACCCAGTCTA AAG TAAGCTGGGTG          TTTGTTTTAAAATTG 100 508
APT61_RS12275 2649716 .. 2649731 + -10.4  -2.78463   TTGCCAGAACATGTA              GCCCAC CTGA GTGGGC               TGTAATGAAAGCCCT  71 224
APT61_RS12365 2665792 .. 2665807 +  -4.6  -3.08522   GATGGCAATAAAAGA              CCCCAT TGAT AAGGGG               CTTTTAAAATAGCTA  49 75
APT61_RS12395 2669466 .. 2669481 + -10.4   -4.2349   CTAAATAACTCAAAA              CGCGAC TTCG GTCGCG               TTTTAGCTATAGCCA  85 121
APT61_RS12440 2674000 .. 2674019 + -10.7   -3.1544   GATTGATTGCAAAAA            CAGCGGC AACAAG GCCGCTG             TTAAGTCTGCTGTCC  76 39
APT61_RS12475 2677706 .. 2677720 +  -4.2  -3.29511   CTCAAGAAAATTAAT               GCTCTA GGT TAGCGC               TTATAACGGGATAGA  50 27
APT61_RS12480 NONE
APT61_RS12485 2679321 .. 2679340 +  -9.3  -5.81412   CCCCGAACTCTCCGA            TCCCGAC CTTAGC GTCGGGA             TTTTTTTTGCCTGCG 100 106
APT61_RS12490 2680236 .. 2680250 +  -4.2  -3.08679   ACCCAATGGGCGCTA               TCTCTG GCC CGGGGA               TCTTACATCCAAAAA  47 389
APT61_RS12495 NONE
APT61_RS12500 NONE
APT61_RS12505 2684625 .. 2684648 +  -7.4  -3.06796   ATCAATGTTTAACAA          CCGGCATCTT TATA ATGATGTCGG           TTACCTGAGGTGAAA  59 50
APT61_RS12510 NONE
APT61_RS12515 NONE
APT61_RS12520 2687231 .. 2687257 + -10.8  -5.00616   TCGCACGCGGATAAG         AAAAAGCCCGGC AGT GCCGGGCTTTAC         TTTTTTAAGCGAGAC 100 27
APT61_RS12530 2688756 .. 2688775 + -13.6  -3.09844   GTTAACCTTCATCGC            CAGGCGTC GACC GACGCCTG             ATTTTGCCATGTAAA  88 75
APT61_RS12535 2689166 .. 2689179 +  -6.7  -3.66803   TATATACTCTCGCCC               CTGCA AATT TGCAG                TTTGCACTGTTACGC  63 66
APT61_RS12540 2689674 .. 2689688 +  -4.9  -3.34043   TACAGTTAACCTGTT               GTCGC CTGCC GCGGC               TTGTCCGATAATAGG  52 47
APT61_RS12545 NONE
APT61_RS12550 NONE
APT61_RS12555 NONE
        rnfD NONE
APT61_RS12565 NONE
APT61_RS12570 NONE
APT61_RS12575 2696198 .. 2696211 +  -8.1   -4.7416   AACAGACCACTGAAA               CCGTC ATTT GACGG                TTTTTCACCTTTTCA  85 28
        tppB 2698345 .. 2698367 + -13.5  -6.06723   AACGACTGAACAGAA           GCCGCTAAC TGTGC GTTAGCGGC           TTTTTTTTTAGCCGG 100 52
APT61_RS12585 2699045 .. 2699073 + -13.2  -2.70946   TAAATTAGTGTTTGT       TGCCGGGTG-GCG CTAT CGTTCACCCGGCA        CTCTTTATAGGCCCG  84 38
APT61_RS12615 2704463 .. 2704486 +   -16  -2.75844   CGTTAAGAACAATGT          GGGCGTGGCC TTTC GGCCACGTCC           CTTTACACTCCACAA 100 35
APT61_RS12620 2706018 .. 2706035 + -11.3    -5.055   TTCGGTAAAGAAAAA             GCCTTGC ATCA GCAAGGC              TTTTTTAAAGGTTAG 100 33
APT61_RS12630 NONE
APT61_RS12635 NONE
APT61_RS12640 2710146 .. 2710161 +  -2.6  -4.62069   GAGAACTCCAGTCCT              TTATCCG TTT CGG-TAA              TTTTTACCGTCCCAA  66 380
APT61_RS12655 NONE
APT61_RS12660 2713340 .. 2713355 +  -7.6  -3.20901   ACCTAAGACTTGCAT              TAGACC AATT GGTCTA               TTACATTGATGGCAT  62 35
APT61_RS12665 2713955 .. 2713974 +  -7.8  -5.27938   AAAATATCATTGCGA            CGCCTGGT GCAT AACAGGCG             TTTTTATTTCACGAT  93 12
APT61_RS12670 2715134 .. 2715151 + -12.7  -2.78816   ATCCCTTCATTGATA             GCGGCGA CCTT TCGCCGC              TATACTAAAACATCG  81 40
APT61_RS12675 2715618 .. 2715634 + -11.5   -4.7261   GCAACTGATCCTTGA              GGGCGCG CCA TGCGCCC              TTTGTTTTACTGCAT 100 33
APT61_RS12680 2716363 .. 2716378 + -10.4  -5.30616   CGACGCATAAAAAAA              GCGACC TTCT GGTCGC               TTTTTATTTACCTGG 100 31
APT61_RS12690 2717895 .. 2717924 + -15.7   -3.5485   ACCCTCCGTTAATCC       CCTGCCCCGCCAG TACG CTGGCGGGGTAAG        TTCCTCTTTTGCATG 100 29
APT61_RS12695 2718599 .. 2718627 + -16.1  -5.53991   TTCGCGGCATAAACA        AAACGCCGAAGGA AAC TCCTTCGGCGTTA        TTTTTTTACTCGGTC 100 29
APT61_RS12705 2721356 .. 2721370 +  -5.6  -3.41745   TGCGGATGGTCCGTT               CCGCGA CTA TCGCCG               TTAATCTTCTCCGGG  54 7
APT61_RS12715 2723720 .. 2723739 + -10.7  -4.67353   AATATTATGTATTAA            CGGGAGC CGGAGT GCTCCCG             TTTTTCCATGGATGG 100 130
APT61_RS12720 2725047 .. 2725066 +   -15  -5.45652   GCTCGCTAAACAAAA            CACCCCGG CAAG CCGGGGTG             TTTTTTATTACGCGT 100 32
APT61_RS12730 2727321 .. 2727342 + -15.9  -3.92143   CACGCTAATTGCGCA           GTAGCCGCC TGCG GGCGGCTAC            TTTCTCCGCATTTTG 100 33
APT61_RS12735 NONE
APT61_RS12740 2728102 .. 2728118 +  -6.5  -2.86601   GGCTTTGATAAAGTG              TCGGCGC GCC GCGTTGA              TCGCTTTTTGCTGCG  51 498
APT61_RS12765 2734579 .. 2734612 +  -3.6  -4.87318   GTCTGGCGCAGCCGA     CGCCGCAGCTGCCG TCCGGC CAGCCACTGGGGCG      TTTTTAACTTTTCGC  78 289
APT61_RS12795 NONE
APT61_RS12800 NONE
APT61_RS12805 NONE
APT61_RS12810 NONE
APT61_RS12815 NONE
APT61_RS12820 2747142 .. 2747173 +  -9.4  -3.10796   AGTGGCCGCAGATCA      CGATGTCAGTGACGC CCA GCGCCAC-GACAGCG      TATTCGATGGTGGCG  64 422
APT61_RS12870 2756696 .. 2756711 + -10.4  -5.71712   TAATTTGTTTAAAAA              GCGTCC TTCG GGACGC               TTTTTTTATATCCGC 100 56
APT61_RS12875 2757233 .. 2757251 + -14.6  -6.06723   CCTGTGTTAATAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTTGCCCGC 100 46
APT61_RS12925 2769424 .. 2769447 + -15.4   -3.0464   AAGTAATACTCATGC          TTCTGGTGGG TACG CCCACCAGAA           TGTTAAGCGTCACTT 100 35
        rprA 2769892 .. 2769913 + -10.1   -5.0916   AGGGAAAAATAAAAA           GGCGAGAAC CTAA GTCCTCGCC            TTTTTGTATTGCAGA 100 204
APT61_RS12940 2773548 .. 2773558 +  -6.8  -3.17075   CACAGGGCACCGCTT                 GTGC CCT GCAC                 TTGAATTCAGCGGGG  57 85
APT61_RS12945 2774746 .. 2774771 +  -7.5  -5.00616   AAGCTCCCTTCACCG         GCCCGGTAAGCG CCA TGCC-ACCGGGC         TTTTTTACAGACCGC  85 82
APT61_RS12950 NONE
APT61_RS12955 2777154 .. 2777174 + -16.9  -3.85698   CAGTGGTAATGACCC            TGCCCTGGC GCT GCCAGGGCA            TTTATCCGAAAGGAA 100 32
APT61_RS12960 NONE
APT61_RS12965 2779034 .. 2779058 +  -8.5  -2.63382   AGTAAAGCCGAGCAA          CTGCCCTGATG CCT CGTCGGGTCAG          CTTATCCCTGTGGGG  61 17
APT61_RS12970 2780018 .. 2780038 +  -5.3  -3.18264   TTATTTTCCGTCGTG            GAGGTCAGC ATG GCTGAACCC            TTGCTCGCTGAAGGC  52 9
        hmuV 2781018 .. 2781028 +  -5.4  -4.11216   GCGCCTGACGCTCAT                 CATC CGC GATG                 TTTTCACGATGGAGG  66 237
APT61_RS13055 NONE
APT61_RS13060 2797101 .. 2797112 +  -5.8  -3.50466   GGGCCAACCAAACGG                CGCA GATG TGCG                 TTAGTTCGTGTTTTT  59 49
APT61_RS13065 2798045 .. 2798082 +    -9  -3.28712   TGCTGGCGGCATAAG   GTGCAGACTGCCGGGC TACATT GCCCGGCGGCGTACAC    TTATAACAGGCCGAG  69 27
APT61_RS13075 NONE
APT61_RS13080 NONE
APT61_RS13085 NONE
APT61_RS13090 2802556 .. 2802600 + -15.4  -3.17229   CTAAGCGCCTCCCCT GCTAA-AAAAAACCGCCTTCA GTGA TGAAGGCGGTTTTTTATTATC TGTTAATCCTCAACT 100 37
        katE 2805312 .. 2805355 +  -5.2  -5.24531   GCCAGCATACCGGCG TAAAAAAAGCCGGGTGGCGGC TTC GCC-TCACCCGGCCTGGTGTA TTTTTTCTGCCCGGT  85 23
        nadE 2812315 .. 2812334 + -12.8  -5.00616   AACAATAATTCTGTC            GGGGCGGC CTCT GCCGCCTC             TTTTTTAACCACACC 100 33
APT61_RS13145 2813275 .. 2813289 +  -7.1  -3.06831   GAAGCCAAAAAATCT               CGCTG AACAA CAGCG               TTCCCTCCGCCTTCA  54 20
APT61_RS13185 NONE
APT61_RS13190 2822908 .. 2822918 +  -4.6  -3.44703   AACAGGGGGCATTAT                 GCGC CGT GTGC                 GTTTTTGCATGTTAT  55 39
APT61_RS13195 NONE
APT61_RS13200 NONE
APT61_RS13205 2826299 .. 2826313 +  -2.8  -3.53733   TTCTTTACGATCGGG               CTTTTC GAT GAAACG               TGTTTCTCAACTGAC  49 106
APT61_RS13210 2827622 .. 2827634 +  -3.3  -3.57462   ACTCTGATCCTGCCT                GACGC TGA GCCTC                TTTCAGCGTCAGATA  50 34
APT61_RS13225 2829517 .. 2829529 +  -3.3  -3.84873   CAGCCATCACAATAC                GCTTC ATC GACGC                TTCTTCCTGTTGTGT  55 260
APT61_RS13235 2831142 .. 2831171 +  -9.9  -3.05046   GAGGGCGAAAAACTC       AGGCCGGGTGAGCG TCG CGC-CACCCGGCGA       ATTTTCAGGCCGTAC  69 64
APT61_RS13255 2836823 .. 2836845 + -16.4  -5.27335   GTACGTTAATCCCCA           TCCCCTCTTC TGC GAAGAGGGGA           TTTTTCTTTGAAGCC 100 32
        ansA NONE
APT61_RS13265 2838653 .. 2838670 +  -9.9  -5.81412   TCGAAGATAAAAAAA             CGGTAAC CTGG GTTACCG              TTTTTTTTACCTCAA 100 135
APT61_RS13280 2840803 .. 2840818 + -10.4  -5.63504   ATTCTGATCCAAAAA              GGCGAC CTCG GTCGCC               TTTTTTTATGGCATT 100 51
APT61_RS13285 2841792 .. 2841803 +  -5.8  -5.65927   GCTCGCTTTATACCA                CGTC TAAC GACG                 TTTTTTGTTTCGGTG 100 80
APT61_RS13310 2845800 .. 2845820 +  -3.3  -3.38294   ACTCAACCAAGCCAT            GCTTTGC CCCGGAT GTAAAGC            TCTGTTTATCTCCCG  48 229
APT61_RS13315 2854595 .. 2854621 + -11.7   -2.8474   ACAATGACTCCGGAC         GTGCATTAACG TCTGC CGTTAATGCGC         TGATTATCCCTGAGA  76 40
APT61_RS13325 2855655 .. 2855675 +  -4.1  -4.36586   TAAAATAATGTGTAT            TACAAAAGA AAG TTTTTTGTG            TTATTTTCCTTATGT  65 140
APT61_RS13430 2876052 .. 2876067 +  -2.4  -3.14344   TCGTCCTGATAGCCC              GGTGCC CGGC GGCGCG               TTGCTGCCGGGCCTA  43 32
APT61_RS13435 2877461 .. 2877485 + -21.5  -3.18274   AGCAACAGTTAACTC          CACCGCCGGTC ACT GACCGGCGGTG          TTACGTTAGCCTCAG 100 29
APT61_RS13450 2881497 .. 2881513 +  -2.1  -4.63542   CAATATAGCGCGCGG              GAGTCTG ACC CAGCCCC              TTTTTAAACATTGTG  66 50
APT61_RS13460 2883961 .. 2883984 +  -8.9  -4.08216   TGCTGGAAGCCACCG          CAG-GTGCCG AGAAA CGGCACGCTG          TTTTCGCGGGCATAG  75 455
APT61_RS13470 2884718 .. 2884728 +  -6.8   -3.6682   GGTGTTAGCCGACTG                 GCTG CGT CAGC                 TTTGAATCAATCCAG  63 10
APT61_RS13480 2886654 .. 2886673 + -10.7  -4.96848   TAAACGATGCAAAAA            GACCGCC ACTGTA GGCGGTC             TTTTTGTCTGAAGCG 100 256
APT61_RS13520 2906845 .. 2906858 +  -9.5  -2.84171   AAAAGTAATAAAAAA               CCGCC CGAA GGCGG                TGAGTTTTTGCGAGT  68 33
APT61_RS13525 2907482 .. 2907505 + -10.2  -2.71001   GCAGTAGTAACCCAA          GCCGGGTGGT GACA GCTGCCCGGC           ATTCATTTAAACGTC  69 34
APT61_RS13530 2908148 .. 2908167 +   -15  -3.67597   TCAGTTAATAAAAAA            CGGGAGCC AACA GGCTCCCG             TTATTACATAACCCG  95 212
APT61_RS13535 2908908 .. 2908923 +  -7.5  -5.64274   CCTGAGTAATAAGAA              GCCCG CTGATT CGGGC               TTTTTTTATGGGTGA 100 205
APT61_RS13540 2911177 .. 2911194 +    -4   -4.7373   AGCCAAGGAAATTAT             ACCCGC TCCCGT GCGGGC              TTTTTCATGGGCTGC  71 499
APT61_RS13710 NONE
APT61_RS13715 2942827 .. 2942837 +  -5.4  -5.31877   ATTTCGTTTATGCGT                 TCTC AGA GAGA                 TTTTTTCTGCTCAAT  85 246
APT61_RS13745 2946504 .. 2946518 +  -8.5  -5.60993   TAACCCCTTAAACAA               CCGGC CTTGA GCCGG               TTTTTTTATGGCCCA 100 38
APT61_RS13750 2947201 .. 2947215 +    -7  -5.00884   GTTCTCTTTGCCCGT               CGCCCG TGG CGGGCC               TTTTTTCCGGAGGAT  88 159
APT61_RS13755 NONE
APT61_RS13760 2948046 .. 2948056 +  -5.4  -4.00057   ACACCCAAATGAGGC                 TCCA AGA TGGA                 ATTTTTTTATCATAT  64 158
APT61_RS13765 2950776 .. 2950793 +  -9.1  -3.33492   AAGTTTTTCAGCTAA             TGGCCCG TTTG TGGGCCA              TTATGAGGTAAATCA  69 44
APT61_RS13770 NONE
APT61_RS13775 2952192 .. 2952202 +  -2.6   -4.2679   GGTTTTGATAACTTG                 TTTT GAT AAAA                 TTTTGATAACCGTTC  59 54
APT61_RS13785 NONE
APT61_RS13790 2954801 .. 2954811 +    -4  -2.82987   ATAGAATACGCCGCC                 TTGA AGT TCAA                 TGTCGTGAGTATTCC  45 40
        mnmA 2955920 .. 2955932 +  -6.2  -3.76492   ATTGAACAACGCCTG                CCGC TGACT GCGG                TTTAATACGATTACA  61 8
APT61_RS13800 NONE
APT61_RS13805 2957994 .. 2958017 + -15.4  -3.35813   AAATAATGCTTTTTG          CCCTCTTTCC ACCC GGAAAGAGGG           TTGCTTCCCCTCCGG 100 35
APT61_RS13810 NONE
APT61_RS13815 NONE
APT61_RS13820 2961505 .. 2961532 +  -8.5  -5.60993   CCTGCAAAACCGTAA       GCCGGGTATGGCA TCGC TGCCA--CCCGGC        TTTTTTTATCGGCGC 100 74
        potA NONE
        potB NONE
        potC NONE
        potD 2967160 .. 2967171 +  -5.8  -3.53012   TATAGATCTCGTCCA                TGCC CAGC GGCA                 TTTCGCCAAACCAGA  55 348
APT61_RS13875 2973335 .. 2973350 +  -8.2  -3.04461   GAGGCCACGCGCTAG              CGCCCT TGCG GGGGCG               TCTTCACGCTGCGTG  63 26
APT61_RS13880 2976906 .. 2976933 + -12.6  -2.84325   CGTCGCCTGACCCAC        TGCCGGGCGACC CTAC GATCGCCCGGCC         TGATATTTCCCCGCG  81 31
APT61_RS13885 2978031 .. 2978050 + -13.6  -5.76949   TAGCCAAATAAAAAA            CGCTCTGC AATT GCAGAGCG             TTTTTTTTCGCAGTG 100 46
APT61_RS13895 2979232 .. 2979247 + -11.8  -2.82742   ATCCTGATCAAAAAA              GGGCGG TTTA CCGCCC               TGCTTCTGCCCCACT  76 34
APT61_RS13940 2988357 .. 2988374 + -12.7  -5.60993   TATTCTGTCGTCAAA             GGGAGCC TGAA GGCTCCC              TTTTTTTATGCGCGC 100 44
APT61_RS14015 3001878 .. 3001895 +  -3.3  -2.80816   TAGGATGGCCCGCAT             GCTGCGT ATGA ACGCGGA              TCTGGTGGGTACGCC  41 303
         rne 3006392 .. 3006409 + -12.7  -5.57396   CGCTTAAGCGCAAAA             GCCGACC TTCG GGTCGGC              TTTTTTATTGCTTCT 100 44
APT61_RS14035 3009060 .. 3009071 +  -2.2  -4.18018   CTGCGGTGGCGTCAT                CATC CACC GGTG                 TTTTCAGTGCAGCGA  59 409
        flgA 3019468 .. 3019482 +  -2.9  -4.63542   TGATGGGAATATTCT               GATTA ACCTA TAATC               TTTTTAAAGATTATG  65 13
APT61_RS14100 NONE
APT61_RS14105 3020318 .. 3020341 + -16.8  -5.38497   GGACAGACAGAGAAC          GGGGAGTACC GACA GGTACTCCCC           TTTTTTGCTTTAGAT 100 52
APT61_RS14130 NONE
APT61_RS14135 3026492 .. 3026505 +  -9.5  -5.40072   TCGATTAACCTCTGA               GGCGC TTCG GCGCC                TTTTTTTGCGGAAAA 100 33
APT61_RS14140 NONE
APT61_RS14145 3027985 .. 3028000 + -11.8  -5.79588   CTCTTTGTTTTTTTT              GCCGGG TCGC CCCGGC               TTTTTTTCGTTTTCA 100 49
        bssS 3028512 .. 3028527 + -10.4  -3.18452   ATTCTCACCCCAAAA              GGCACC TCAC GGTGCC               TCATTTATTTCGCCC  73 52
        solA 3029730 .. 3029749 + -13.6  -4.49531   CCGATAATGCTGCCA            GGCTTCGG GTTG CCGAAGCC             TTTCTTCCTTTTATT 100 34
APT61_RS14160 NONE
APT61_RS14165 3031298 .. 3031331 + -17.5  -4.24123   CAGCAGAAGTAATGC     CCTCGCCCGGTCAGCA TCC TGC-GACCGGGCAAGG     TTTTAGCGTTATTCC 100 29
APT61_RS14175 NONE
APT61_RS14180 3034944 .. 3034963 +  -2.8  -3.84514   CCTGATTAAGACAAC            TCCGTGAA TGCT TTTACGGC             TTTCATACTTGCAAT  54 32
APT61_RS14185 3035661 .. 3035680 + -12.2  -4.41348   CTCCAAAGATAAAAA            TACCGGCT CGAG AGCCGGTA             TTTATTTGCCCCGCG  95 276
        opgC 3041255 .. 3041281 + -10.9  -3.53091   ACCAGCTAAACCTTT        GT-GCGCCGGTT ACGT AACCGGCGCCGC         TTTACAGAAGCCACT  79 32
APT61_RS14235 NONE
APT61_RS14240 NONE
APT61_RS14245 NONE
APT61_RS14250 3048199 .. 3048224 + -11.9  -4.56702   TAGAAAGCGCATTAA         AAAGGCGAGAC CCTG GTCTCGCCTTA          TTTATTTGCTTAACG 100 41
APT61_RS14275 3051470 .. 3051489 +   -10   -5.4387   ATATTTAAGATGAGA            GCTCGTAC GAAA GTACGGGC             TTTTTTCGTTTATAT 100 40
APT61_RS14280 3051653 .. 3051672 +   -10  -5.79526   CATATTTAAAGAAGA            GCTCGCAT GAAA ATGCGGGC             TTTTTTTTCGCATGT 100 39
APT61_RS14285 3052021 .. 3052040 +   -10   -5.4387   ATATTCAAGATGAGA            GCTCGTAC GAAA GTACGGGC             TTTTTTCGTTTATAT 100 40
APT61_RS14290 3052205 .. 3052224 +   -10   -5.4387   ATATTCAAGATGAGA            GCTCGTAC GAAA GTACGGGC             TTTTTTCGTTTATAT 100 40
APT61_RS14295 3052389 .. 3052408 +  -7.8   -5.4387   ATATTCAACATGAGA            GCGCGTAC GAAA GTACGGGC             TTTTTTCGTTTATAT  95 40
APT61_RS14305 NONE
APT61_RS14310 3055214 .. 3055239 +  -8.3  -2.98947   CAGCGTTAATGGTTC         GCTCCATGG TCTGAAAC CCGTGGAGC          TGATTATTGCTTAAC  63 32
APT61_RS14315 3055456 .. 3055475 +   -10   -5.4387   ATATTTAAGATGAGA            GCTCGTAC GAAA GTACGGGC             TTTTTTCGTTTATAT 100 40
APT61_RS14320 3055639 .. 3055658 +   -10  -5.79526   CATATTTAATGAAGA            GCTCGCAT GAAA ATGCGGGC             TTTTTTTTCGCATGT 100 39
APT61_RS14325 3056001 .. 3056034 + -15.5  -3.15788   CACCGCCATATTCAA     GAAAAGAGCTCGTAC GAAA GTACGGGCTTTTTTC      GTTTATATTCTCCCG 100 33
APT61_RS14330 3056191 .. 3056210 +   -10  -4.67651   CATATTTAAAGAAGA            GCTCGCAT GAAA ATGCGGGC             TTTGTTTTCGCATGT 100 39
APT61_RS14355 3062680 .. 3062690 +  -3.2  -3.34398   TGGTGTTGTAGTTAG                 TTGC CCG GCGA                 TGTTTGCCGGGCCAA  48 30
        putA 3070084 .. 3070108 +  -9.9  -5.00616   ATGTAGTTTTCACCG          GCCGGATAAGC GTA GCGCATCCGGC          TTTTTTACACGGAGA 100 97
APT61_RS14375 3070889 .. 3070899 +  -2.4  -3.01712   GCTGGATCGCCACCA                 GCGG GGT CAGC                 TCTTCGCGGAACGCC  40 390
APT61_RS14385 NONE
APT61_RS14390 NONE
APT61_RS14395 3073631 .. 3073644 +  -2.4  -3.85909   CACATCGGTCAGTGA               GGTT GCCATG AACC                TTTCAATTTCACTCC  52 26
APT61_RS14400 NONE
APT61_RS14405 NONE
APT61_RS14410 3075522 .. 3075532 +  -2.4  -3.05268   GCTACCACGCCCTAA                 TGCG ACC CGCC                 TGTTAACCCTCCTTA  42 9
APT61_RS14415 3076896 .. 3076920 + -17.1  -5.59962   ACCTTGATCCAGCGT          GGCGCTGTCGG CCT CCGCCAGCGCC          TTTTTCTTTCTTTTA 100 34
APT61_RS14430 NONE
APT61_RS14435 3079478 .. 3079496 +  -3.8  -4.66987   GTTACCCCCCCTCTT             TGGGTGTG TAG TGCATCCA             TTTTATTGGACTCTC  71 148
APT61_RS14440 3080324 .. 3080338 +  -7.8  -3.05333   AGACCAGCAATAAAA               GGCGAT TAC GTCGCC               TGTCTGCTTCTCTGT  60 48
APT61_RS14450 3082371 .. 3082385 +    -7  -3.76373   CTTCCCATTAACTCA               CCGGGC AAA GCCGGG               TTTACCTGTTCGGGC  67 49
APT61_RS14480 3087574 .. 3087595 +  -6.5  -2.70786   GCACAGGGCGATGTG           ATGTGGCGG ATCC TCGCCACAG            GTTGTCAGTTTTGCG  53 25
APT61_RS14485 3089559 .. 3089578 +  -4.2  -3.28712   TTCGCTGATGTTTAA            CTG-GCTGG CCG CCAGCGCCG            TTGTCCAGCGCGCGC  47 238
APT61_RS14505 3092041 .. 3092066 +  -9.8  -4.37886   AAGGTTGATTATAAA         GTCCGTTACT TTACGC GGTAACGGAC          TTTTATAAAACCTGG  85 69
APT61_RS14510 3093611 .. 3093638 + -17.2  -3.86015   ATAGATTCAGTCGAA        GCATAAATGCCC TTAC GGGCATTTATGC         TTTCTACGGGAACTG 100 155
APT61_RS14520 3095435 .. 3095461 + -10.1  -3.19192   GCTGAGACGTTTTCT         TGCCCGGGTCT ATGGA GGGTCCGGGCA         TTACATTGGCTGGAG  73 36
APT61_RS14525 3096281 .. 3096294 +  -6.7  -2.74012   CTTGACGTGGTGCAA               CCGTT CCAC AACGG                TGCTTGAGCTACTCA  49 371
APT61_RS14545 NONE
APT61_RS14550 3103339 .. 3103351 +  -6.9   -4.3739   TAGCTACCAAACCCA                CCGGT CGC GCCGG                TTTTATGCACCCATG  74 181
APT61_RS14570 3107280 .. 3107305 +  -9.8  -4.07568   AAGAGCATTAATTCT         GTAGCGTTGCG CCAGA CGCAACGC-AC         TTTTGCGCAAACGGG  81 30
APT61_RS14575 3108845 .. 3108863 +  -6.6  -4.56597   CACTCAGGCTTGCCA             GTGCCAGG GTG TCAGGCAC             TTTTTGCCCCGCGCC  78 332
        cmtB NONE
APT61_RS14590 3110629 .. 3110643 +  -2.1  -3.61652   ATCAAAGAAATTCTC               TCGGA AAATC TCTGA               TTAATTATTTGCGGC  47 11
APT61_RS14595 NONE
APT61_RS14600 3112778 .. 3112793 +  -6.8  -3.33419   CGTTTCCTTTAACAC              CTTGCC CCAC GGCAGG               TATTGCTTTGCCCCT  59 166
APT61_RS14605 NONE
APT61_RS14610 3113691 .. 3113706 +  -4.8  -3.37568   TATTGAAAAACTTAC              TGAATT AGTT AATTCA               TAATTTTTATCTGTG  52 7
APT61_RS14615 3115004 .. 3115027 + -15.4  -4.70879   CGCAAAAGCAAAAAA          CCCTGCGATA TTGC TATCGCAGGG           TTTTTCAAATTTGGC 100 170
APT61_RS14625 NONE
APT61_RS14630 NONE
APT61_RS14635 3119327 .. 3119339 +  -3.4   -4.1196   CATCTGGAGCCTGAA                CTAC AAGAA GTAG                TTTTCAGCGTACATT  58 13
APT61_RS14640 NONE
APT61_RS14645 3121938 .. 3121954 +  -5.9   -3.1996   TTTTTATCCATTTCA              TGAGTAA GTT TTGCTCA              TTACGTTAAAGTTTA  55 133
APT61_RS14650 NONE
APT61_RS14655 3124260 .. 3124277 + -11.3  -3.85888   CAGTAGCATAAAAAA             GGGACTC TCAC GAGTCCC              TTATCTATTTTACTT  85 511
APT61_RS14665 NONE
APT61_RS14670 3129633 .. 3129659 + -18.2  -3.72576   TTAAAGGCTGACAAA         CCTACGTTATCG CAA CGATAACGTAGG         TTTACTCCAGAACAG 100 37
APT61_RS14675 NONE
APT61_RS14680 NONE
APT61_RS14685 3134049 .. 3134065 +  -2.1  -4.07618   TGCCAGATAAGATGT              CGCCTGT CGA GCGGACG              TTTCATTATTAAAAC  56 501
APT61_RS14705 3137549 .. 3137574 + -13.3  -5.15634   CCATAGTGCTACATA         AAAAGCCCCGC TTAT GCGGGGCTTTC          TTTTTTGGTAAACTG 100 42
APT61_RS14710 3138047 .. 3138064 +    -7  -3.15544   GCCCGCTTTAAGCCA             GTCGAG CAGTTT CTCGAC              TTGCTCCGCCTCGCC  54 124
APT61_RS14720 NONE
APT61_RS14725 3140079 .. 3140102 + -13.2   -5.5604   CGCAACTAACGAAAA          CCCGGT-AGCC GGT GGCTGACCGGG          TTTTTTATTACTTCG 100 32
APT61_RS14735 NONE
        mgsA 3142303 .. 3142318 +  -6.8  -3.86897   CCAGCTGTAGTTTCG              GCCAGCG GGT CGC-GGC              TTTCTCCAGGCTGGC  66 433
APT61_RS14750 3144636 .. 3144656 +  -6.1  -2.71731   CGTAACAAGGATCCC            GTGCGCTTA TGC TAAGCCCGC            TGCTTCGCCGCTACA  51 36
APT61_RS14755 3146814 .. 3146850 +  -8.6  -3.14132   GCGTTTTGTACCACT   CCACCAGCTCCCGGCGC CTGA GCTCCGGGAGC-GCTGC    TTCATGCAGCCCCAC  60 60
APT61_RS14765 3148185 .. 3148211 +  -6.5   -3.2048   GTTCCCCTTCTAAAA         GCCGCGACA AGTCTTGTC TGCCGCGGC         TTCCTCCAGTTTAGC  57 93
APT61_RS14770 3149547 .. 3149564 +  -9.8   -5.4833   TCGTCTGACAAAAAA             CCCCGC CATGTT GCGGGG              TTTTTTATTGCCTGA 100 45
APT61_RS14780 NONE
APT61_RS14785 3152613 .. 3152637 + -18.7  -5.00616   GAAGCATAAAACGGC          GAAACCTCCGC ACT GCGGAGGTTTC          TTTTTTAAAGAGACG 100 55
APT61_RS14815 3161816 .. 3161839 + -10.3  -2.54999   CTCGAGGCTGAAACA          GACCGGCTG CGGTTT TAGCCGGTC           ATTCATCACTTTAAT  62 49
APT61_RS14830 NONE
APT61_RS14835 NONE
APT61_RS14840 NONE
        ssuC NONE
        ssuB 3168032 .. 3168049 + -11.3  -3.70033   TGCAGAGATTAAAAA             CGGCAAC CGAG GTTGCCG              TTATGCTTTTAGCTT  81 64
APT61_RS14860 3172171 .. 3172189 +  -8.1  -4.23391   CAGTTGATCCTTTCA             GGGAGTC TGCCC GGCTCCC             TTTCTCATTTATTTC  75 34
APT61_RS14865 3173737 .. 3173762 + -11.9  -4.78237   TGATTCAGTAACACT         CAATGGCCAGC CTCT GCTGGCCATTA          TTTTATTCTGCACTG 100 38
APT61_RS14870 3175443 .. 3175458 + -10.4  -5.64274   TATATGTCTAAAAAA              CAGGGC TTCG GCCCTG               TTTTTTTATGCCTGA 100 58
APT61_RS14875 3176866 .. 3176882 + -12.3  -5.80003   ACCGGGCAAAAAAAA              GCCTGCT TTG AGCAGGC              TTTTTTATTTGTTCG 100 106
APT61_RS14915 3188813 .. 3188830 +  -4.1  -3.66178   TCCTGCATGGTCAGG             CCGGTAT TGCG GTACTGG              TTTAGCGTTCCCCAC  54 399
APT61_RS14985 3205244 .. 3205264 + -15.5  -6.02919   ACCTACGTTATATTA            CGGGGCAAT TTT ATTGCCCCG            TTTTTTTATTTCTGC 100 78
APT61_RS14990 3206446 .. 3206458 +  -3.4   -4.3739   CCTGCGTGGCGATAA                CCAT CATTA ATGG                TTTTCTCAGGCAGTA  63 16
APT61_RS14995 3208832 .. 3208851 + -11.4  -4.58395   AACGCGTACAATAAA            GGCTCCAC ACAA GTGGGGCC             TTTTTAACACCTCCC 100 68
        pflA 3209739 .. 3209758 + -12.1  -5.12172   CATGTATTAACAAAA            CGCCCGG CTTTCA CCGGGCG             TTTTATTTATTAGTC 100 31
APT61_RS15055 3225855 .. 3225868 +  -8.1  -4.42974   AAACGTAAAAAAGGC               GGCGA TAAG TCGCC                TTTATTGTCTCTGCG  78 59
APT61_RS15060 NONE
APT61_RS15065 NONE
         aat 3230362 .. 3230389 +  -7.8  -4.01419   TAATACGCTGAAACT        GCTTTGCTGCGTT TTA AACGC-GCAAATC        TTTACTTAATTGATG  73 213
APT61_RS15075 3230718 .. 3230735 + -14.1   -5.7946   AGAGAGAATACTAAA             GGCCGGG TTAT CCCGGCC              TTTTTTTATTCAGCA 100 64
APT61_RS15095 3236112 .. 3236132 +  -8.3  -5.27335   ACCCCTCACTCAAAA            TGCCAGC CCGATAC GCTGGCA            TTTTTATTTGCGGGC  95 61
APT61_RS15110 3240414 .. 3240449 + -11.8  -3.04398   ACCGGCCGTTAATCG    GCTCTCCCGCGCGC CAGCCACA GCACGCGGGAGAAC     ATTTTCCGCAACAGG  78 29
APT61_RS15120 3243207 .. 3243226 +  -3.6  -3.25823   CTGAACCGCCTGAAT            TGG-GTAGT GTC ACTGCGCCA            TTCATATAAAGGACC  46 113
APT61_RS15125 NONE
APT61_RS15130 NONE
APT61_RS15135 3246980 .. 3247005 + -15.5  -3.72576   GACAGCAAACTGTAG         GCCGGGC-ACAC GCA GTGTCGCCCGGC         TTTACTGGCGCAGAG 100 81
APT61_RS15145 NONE
APT61_RS15150 NONE
APT61_RS15155 NONE
APT61_RS15160 3253224 .. 3253234 +  -4.6  -4.85918   CCCGGTTATTTGTAC                 TGCG ACA CGCG                 TTTTATTCTCTGGTA  77 213
APT61_RS15235 NONE
APT61_RS15240 3270116 .. 3270128 +  -5.5  -3.16492   TATAATGGTGCTACG                CGCCA GGT TGGTG                TATTCCTGAATATAG  49 124
APT61_RS15260 3272883 .. 3272911 +    -9  -3.96148   GAAAACCCCGTAAAA       TGTCTGGCATTTC GTGA GGAATGCC-GACA        TTTATACTCGCCGCC  76 71
APT61_RS15265 NONE
APT61_RS15270 NONE
APT61_RS15275 3275270 .. 3275284 +  -2.8  -2.60075   CGTTTTGAACGGAGA               CCAG GCTGATG CTGG               ATTACTTACCCGAAC  41 17
        artM 3275972 .. 3275998 +  -4.3  -5.64274   ATTGTGATTACTCAA        GGCGGGCAAGTC TAAC GACCA-CCCGCC         TTTTTTTATGAATCA  91 51
APT61_RS15285 3277245 .. 3277268 +  -4.6  -3.21099   AGGTTGGTCACCACC          CGCTCGATC ATCGACA GATCG-GCG          TTGATCATCGGCAAC  49 418
APT61_RS15345 3288133 .. 3288151 + -14.6   -4.8048   CCAGTAAGCCTTTCA             CGCCCTCA CTC TGAGGGCG             TTTTTACTCTCACGC 100 34
APT61_RS15355 3290600 .. 3290636 +  -3.7   -5.4833   CCCCAATTTGTGGAG    CCCATCAACCCCG CCGTTTTGGTT CAAGGTTGATGGG    TTTTTTGTTGCCTGA  81 137
APT61_RS15360 3291802 .. 3291818 +    -3  -2.57463   CCTCCCCGAGCCAAA             G-GAGCA ACAA TGCTCGC              GTTGTACAACACATT  41 118
APT61_RS15365 3292419 .. 3292437 + -10.2  -3.17075   TGCCGTTTATCCCAG             GCGCGGGA CCC TGCCGCGC             TTACCTTCACGCCAA  73 97
APT61_RS15400 NONE
APT61_RS15405 3301599 .. 3301616 + -12.7  -3.70139   AAAACAGCGCATAAA             GGCCAGC GCAA GCTGGCC              TGTTTGTTGAGGTTA  90 65
APT61_RS15415 NONE
APT61_RS15420 3304354 .. 3304370 +  -8.7  -3.16191   CCATCCGGTAAAACG              GCGAGCA GAC TGCTTGC              TTAATCCGGCTGTAA  64 100
APT61_RS15430 NONE
APT61_RS15435 3307145 .. 3307162 +  -9.8  -4.26202   CGAGTTAAACTTGAA             CCCCCG ACGTAA CGGGGG              TTTATTAATGGCTCT  83 52
APT61_RS15440 3308019 .. 3308030 +  -7.2  -3.23899   CGGGTCAGGCGAAGC                CGCC ACCC GGCG                 TTGACTTAATTAAAC  60 100
APT61_RS15450 3310483 .. 3310498 +  -2.4  -4.77986   GATGCCATGCGTCGC              CAGCGG CCAG CCGTAG               TTTTTGCCTCTTTCC  70 384
        rimO 3313508 .. 3313524 +  -9.4  -5.85737   CAGGCCCGAAAAAAA              GGGGAC CTAAA GTCCCC              TTTTTTTATTGCTAT 100 73
APT61_RS15505 3322721 .. 3322743 +  -5.4  -3.14132   TCCTCCAGATAGCAC           AGCGGCTGGG TCA CCCAGGTGCC           TTCATGCAGCACACA  49 373
APT61_RS15515 3325588 .. 3325607 + -13.6  -3.53012   AATTGTTCTGAAACA            GCCATCCC TGCG GGGATGGC             TTTGCCGAACCAGGC  91 39
APT61_RS15520 NONE
APT61_RS15525 3327483 .. 3327494 +  -3.6  -3.53444   TGCCAGGCTGTTTTG                CCGC CGCG GTGG                 TTTGCGCACCGGTAG  51 323
APT61_RS15560 NONE
APT61_RS15565 3336230 .. 3336249 + -13.6  -4.58236   GGAGGTTAAAGCAAA            CGGCAACC TGAA GGTTGCCG             TTTTAGTGTTTTCTC 100 32
APT61_RS15575 NONE
APT61_RS15580 3340631 .. 3340649 + -13.8  -2.61264   CCGTGAACGTGACAA             GGGGGGCC GCC GGTCCCCC             CTTGTCAATCCCCGC  84 225
APT61_RS15585 3342160 .. 3342177 +  -2.7  -3.95126   AGGTTGTGCACTTCA             TCAAGTT ATTT AACTTGC              TTTAACTTATTTTTA  54 84
APT61_RS15590 3343552 .. 3343588 +  -9.5  -4.74706   GAAAGCGAAATACAA    ACCTGTCATACAACATT TAA ATTGTGGTATGACAGGA    TTTTTAAATGTTAAA 100 65
APT61_RS15600 3346684 .. 3346706 + -11.4  -3.12749   AGCGCAGGCGCTGTT           CAACATTGCT CCT GGCAATGTTG           TCTTCGGCTTATTCC  79 224
APT61_RS15635 3354726 .. 3354752 +  -7.4  -5.06585   AACAAACCATCTCAC        T-AAGCGGCGT CGCGGT ACGCCGCTTCA         TTTTTGTGTCATTTA  88 23
APT61_RS15640 3356834 .. 3356850 +  -3.5  -4.64676   AGGAATAAGCTGAGT              GCACCGC GAA GCGGCGA              TTTTCTTGCCGGTAG  66 268
APT61_RS15650 3358903 .. 3358931 + -20.5  -3.09492   CGCTAGCCAAAATTA        TTTTGCCGGGAAG CCA CTTCCCGGCAAAA        TATTCCCATTCGCAA 100 35
APT61_RS15655 3359700 .. 3359718 + -10.2  -4.29656   CATTTTGCTATCACA             CCCTCGCT TCT GGCGGGGG             TTTTGCACTTTTATA  85 48
        glnH 3360812 .. 3360834 + -11.9  -4.17048   TGAGCACTTTTTATC           CTGGGGGCG TGCTT CGCCCCCTG           TTGTTTTCACCACGG  91 52
        glnP 3361509 .. 3361520 +  -4.4  -2.95448   GTCGTCTTGAAAGAA                GGAT GAAA ATCC                 TGTGATTGAATTTAA  47 9
        glnQ 3362268 .. 3362295 +  -9.9  -5.30686   CTGTTCGTACTTCAG       GCCGGGTAAGGCG TCGC CGCC--ACCCGGC        TTTTTTGTCGCTGTT 100 49
APT61_RS15675 3364779 .. 3364791 +  -9.1  -3.66166   AAGCGGCTCTGCTTC                TGGCC CTG GGCCA                TCTCTTTTTTCACCA  69 141
APT61_RS15685 3366151 .. 3366178 +  -8.4  -5.00884   TTCCCTCCCTGTATA        ACGACTGCATCC TCTC GGGTGCAGTTGA         TTTTTTGCCCAAAAT  93 41
APT61_RS15690 3368699 .. 3368716 + -12.7  -2.72043   CACTTCTGATCCCGC             GTGGGGC TTCG GCCCCAC              CTTTCGGAGAACCTT  81 32
APT61_RS15695 3369415 .. 3369431 +  -2.9   -5.0133   TCTGAAATCTAGCCC              CGCGC CTTGATT GTGCG              TTTTTTGACCCCATA  74 29
APT61_RS15700 3369738 .. 3369766 +    -3  -3.53012   GGGATCGAAAGACAG        CCAGTTGCGATG ACTGG CATGGCGGCGGG        TTTACCACGCAAGCG  49 13
APT61_RS15705 3370377 .. 3370398 + -15.9  -5.81412   GTTGTTATTTTTTTG           GCCCGTCCA TCGC TGGACGGGC            TTTTTTTTCGCTAAA 100 106
APT61_RS15715 3372144 .. 3372177 + -19.1  -4.21773   GATATCATCAATTCA     GAAATATCAGCCCTG ATTT CGGGGCTGATATTTC      TTGTTTATGTTGAGA 100 39
APT61_RS15720 3372943 .. 3372979 +  -2.3  -3.90048   TTCCTGTCATTTACT   CG-CACTGCT-GGTCAT TTTAT GTGGCCTGGCGGTGGCG   TGTTTTTCACAGCAA  52 94
APT61_RS15725 NONE
APT61_RS15730 NONE
APT61_RS15735 3377002 .. 3377027 +  -8.1   -5.0538   CGGACGCTTTTTTTA         CGCCCGGCGGC GAGT GTAGCCGGACG          TTTTTTCACCTCGGG  91 58
APT61_RS15750 NONE
APT61_RS15755 NONE
APT61_RS15760 NONE
APT61_RS15765 3385374 .. 3385390 +  -2.1  -3.76789   TGGCGCTCCGCTCGC              CGGACCT GTA AGACCCG              TTGATTTTGTAGGTT  50 52
APT61_RS15770 3386911 .. 3386927 +  -2.2  -2.79312   GACGCGTATGCGTTG              TTGCCA CTTCA TGGCAC              TCTCCTGAAGGATTT  39 386
APT61_RS15780 NONE
APT61_RS15785 NONE
APT61_RS15790 3390028 .. 3390060 + -11.9  -2.87132   GTGATGTCCCCTCAC      CTCAACCCTCTCCCC ATC GGGGAGAGGGAGAAG      TCTGTGCAGGCCCGG  76 37
APT61_RS15825 3395191 .. 3395203 +  -4.1  -4.47328   AGGCGCTGTTCAAAA                TTGCT CCC GGCAA                TTTTGTCCTCAGCTT  65 388
APT61_RS15835 3399185 .. 3399195 +  -8.2  -3.14132   TAGTGCCCGACGGTT                 GCGG TGT CCGC                 TTCGTCGCCCAGCCA  57 49
APT61_RS15860 NONE
APT61_RS15865 3404660 .. 3404675 +  -7.5  -5.60993   AGTTAACTAAAAAAA              CCGGC CAATAA GCCGG               TTTTTTTATAGGCCC 100 35
APT61_RS15895 3412680 .. 3412695 + -10.4  -5.99154   CCGGGCATAAAAAAA              CCTCGC ATTG GCGAGG               TTTTTTTATTTCATC 100 211
APT61_RS15905 3414930 .. 3414946 +  -2.1  -3.90729   TGAATGCGAATGAGC              ACGCTGC TTT GCAGGGG              TTTATCCAGCTTATT  53 273
APT61_RS15925 3418481 .. 3418493 +  -4.1  -3.71848   TCGCGCCGACAGTGC                GTATC CCT GATGC                TTATTGCTGCAAAAA  55 53
APT61_RS15930 3419999 .. 3420015 + -15.1  -5.44119   GGTCTGATATCCTCA              CGGGGGC CAT GCCCCCG              TTTTTTTCGGATAAC 100 34
APT61_RS15935 NONE
APT61_RS15940 NONE
APT61_RS15945 NONE
        galM 3424460 .. 3424477 + -12.7  -5.75342   GCTCAATAAAAACTG             GCCCTCC CACC GGAGGGC              TTTTTTTTGCCCAGC 100 32
        gpmA 3425460 .. 3425479 + -12.2  -5.75342   GCCTAAGATACAGAA            TGCCGGAT GCTA ATCCGGCA             TTTTTTTTAGCCGCG 100 67
APT61_RS15965 3427379 .. 3427404 + -12.7  -5.24531   GTAATGCGATGATGA         TGAAGGAGAGC TAAG GCTCTCCTTTA          TTTTTTGTGCAAAAT 100 47
APT61_RS15970 3428410 .. 3428440 + -23.4  -3.15861   TCACCATTAACGTGC       CAGCGCGTGGGAAC CTC GTTCCCGCGCGCTG       TTAATCCACATCCTG 100 31
APT61_RS16085 3446622 .. 3446635 +  -2.4  -4.84311   TGTAGCGGCCAACCA               TGTC GAAACA GACA                TTTTATTATGTCAAA  70 53
        gltA 3458426 .. 3458455 + -12.3  -4.74103   AGAGGATGCAAAATA       AAAAACGGTAACC CAAG GGTTACCGTTTTA        TTTTTACCTTCGCCA 100 83
APT61_RS16185 NONE
APT61_RS16190 NONE
APT61_RS16195 NONE
APT61_RS16200 NONE
APT61_RS16205 NONE
APT61_RS16210 3475057 .. 3475076 + -13.6  -4.62471   TGAGAGAAAGCAAAA            CGGCAACC CTGA GGTTGCCG             TTTTTAGAGGTTCCA 100 38
APT61_RS16225 3478312 .. 3478333 +  -5.7  -2.73483   TTAAAAAGAGAGCGA           CTGGTCGCC TGCG GGCCTCCAG            TCGTTGGCGTGCCGT  51 41
APT61_RS16230 3478762 .. 3478775 +  -3.8  -3.54638   GCACAGAGTGCAGTC               CTGC GTGATA GCAG                TTTCCGCAGGCTTCT  52 75
APT61_RS16235 3479641 .. 3479663 +  -4.9  -2.90496   CCAGGTGCATTTTCT           GTCACTTCT TCTTT AGAAGTGAA           TCGTTTAGCAACAGG  47 268
         fur 3480155 .. 3480172 + -11.3     -6.13   TTGCATCAACTCTGA             GCCAACC TGAC GGTTGGC              TTTTTTTTTGCCTGT 100 44
        nagB 3487505 .. 3487537 + -10.6  -4.03995   TCAAAGGTCTGTAAT     GTAACGCCGCCTCTG TTTG CAGAGGCGG-GATGC      TATTTTTATACCGGG  85 27
        nagA NONE
APT61_RS16275 NONE
APT61_RS16280 3490743 .. 3490760 + -11.3  -5.46698   TTCTGTAACCCGAAA             CCACGTC CCCG GACGTGG              TTTTTTCATTTTGCC 100 33
        asnB 3492668 .. 3492685 +  -9.1  -5.47218   AACAAGCGTCGCCAT             GAGGTCC TTCG GGGCCTC              TTTTTTTGCCTCGCG 100 43
APT61_RS16290 NONE
APT61_RS16295 NONE
APT61_RS16300 3493157 .. 3493172 +  -4.6  -3.66844   CCATATTTCTTCGAT              TTGCGG TTCT CCGCGG               TTATTGGGGTATCGC  57 38
APT61_RS16305 NONE
APT61_RS16310 NONE
APT61_RS16315 NONE
APT61_RS16320 3493586 .. 3493614 + -20.5  -4.95758   CCAGCCACTTAGTTA        CAAAAAAGCCCGC TCT GCGGGCTTTTTTG        TTTTTGTCATCTGAT 100 34
APT61_RS16330 3496429 .. 3496449 + -13.3   -4.2142   AGCCATAATTCCTCT            GGCCTGCTA TTT TGGCAGGCC            TTGTTTTCCCCTGTT 100 33
APT61_RS16335 NONE
APT61_RS16340 3498081 .. 3498112 + -12.2  -2.63913   TTGCCGAGAAAGAGT      AGTCTGTTCGGCGC TTAT GCGCCGGACTGACA       TAATGTGCCGTCGTG  78 24
APT61_RS16345 NONE
         lnt 3500787 .. 3500819 +  -8.3   -3.9534   TCGCACCAGCATAGT      TCGTCGGTAGCACCG AAA CGGTGCAACGGGAGA      TTTATGCCTCTGAAT  73 204
APT61_RS16355 3502032 .. 3502048 + -12.3  -5.94713   CTCACCAATCTTCGA              GGGTAGC GCT GCTACCC              TTTTTTTTCTGGAGT 100 147
APT61_RS16360 NONE
APT61_RS16365 NONE
        artP 3504217 .. 3504240 + -15.4  -2.75229   GCATTAATCTTCCCG          GTGCGCAATC GCAG GATTGCGCAC           TGCTTCACGCTTTTC  95 34
        rihA 3505276 .. 3505309 + -25.5  -3.10959   AGTAGTAATACGACG     CCACCACGATGCGTC ATCG GACGCATCGTGGTGG      TCTCTGTTAAGGTTC 100 36
        leuS NONE
APT61_RS16390 NONE
        holA NONE
APT61_RS16400 3510970 .. 3510981 +    -3   -3.6422   CTTCCCGCCAGCACT                GTTT TACA AAAC                 TGTTTTACAAAAATG  51 122
APT61_RS16405 NONE
APT61_RS16410 NONE
APT61_RS16415 NONE
APT61_RS16420 NONE
APT61_RS16425 3516255 .. 3516265 +  -5.4  -3.31915   CACTTTTTTTAATTC                 CATC ACG GATG                 TCGTTTTTCTGACCA  54 140
APT61_RS16430 3517542 .. 3517571 + -10.2  -5.44721   TATACTATGTAACCT       GA-TAACTCCCAC CCGAC GTGGGAGTTATTC       TTTTTTTGACGTACT 100 76
APT61_RS16435 3517872 .. 3517895 + -12.5  -3.61175   CTGTAACACCTTTTC          GGTTACCCG CATCGC CGGGTAACC           TGTTTCTCCTCTGTG  86 35
APT61_RS16440 3518612 .. 3518633 +  -9.5  -4.08557   ATTATCCCGGCAATT           TGGCTCATT ATTT GATGAGCCA            TTCTTATTTCAAGGC  81 40
APT61_RS16445 3519845 .. 3519860 +  -3.2  -3.46068   ACGTCATCCGCCAGG              CCTTCT GATC AGGGGG               TATTTCCCTTAAAGC  50 18
APT61_RS16450 3521063 .. 3521076 +  -9.5  -5.71712   TCACCCATAAAAAAA               CCGGC TTTA GCCGG                TTTTTTTCTATCGCA 100 63
APT61_RS16465 3522853 .. 3522869 + -13.7  -4.24123   CCAGAACGAAAAAAA              CCCGCTC AGG GAGCGGG              TTTTGAAATTCTTGC 100 199
        dcuC 3526161 .. 3526174 +  -9.5  -5.05228   ACACTACAGCATAAA               GCGCC TACG GGCGC                TTTTTGTGCTTTAAT 100 44
APT61_RS16485 3527129 .. 3527146 +  -8.4  -3.59738   CGTCGGCCCCCCGGC             GCGCAG GACCGG CTGCGC              TTTCGCCGTCTGGTA  66 114
APT61_RS16495 3528523 .. 3528542 + -12.2  -3.67737   AACCCGCTTTGCCCA            GAGGATGC CAGG GCATCCTC             TTTCCGCGTTTTCTA  88 60
APT61_RS16505 3530649 .. 3530670 + -14.5  -3.40622   CGGTGAGATAAAAAA           GAGGCTACC GTCA GGTAGCCTC            TGTGTTTTGCAGGTG  93 221
APT61_RS16520 3534870 .. 3534905 +  -8.3  -3.53012   AAATCAAATTGCCGC    CAGGAG-CTCGGCTGC CGCCT GCAGCGTAGCCTCCTG    TTTGGCGAAGCAGAG  69 106
APT61_RS16530 NONE
APT61_RS16535 NONE
APT61_RS16540 3538177 .. 3538217 +  -4.6  -3.24017   TGGGGAGAGGGCTGG GGTGAGGGGTACATGCGGC TCAG GCGGCG-GTTCCGTTCACC  TTACGTTCTGCACTT  50 223
APT61_RS16550 3541219 .. 3541230 +  -3.6   -4.2679   GTTGAGCTGATAAAA                CTGC CGGG GCGG                 TTTTCATGCAGGTTA  65 341
APT61_RS16575 3547157 .. 3547168 +  -7.2  -2.92642   CGGCGGATTGACGCC                GGGC AAAC GCCC                 TCTATACCTAATGAT  59 30
APT61_RS16580 3547982 .. 3548003 + -15.9  -3.11704   GCAAAGATTGGGTAG           GCCTCTGCC GTCT GGCAGAGGC            GTTTTCACGTGTTCT 100 50
APT61_RS16595 NONE
APT61_RS16600 3551824 .. 3551838 +  -2.1  -3.88232   ACGCTTTCTTAGCCA              TGCTGC TGAT GC-GCA               TTATTCTCTGAACAG  52 0
APT61_RS16605 3553122 .. 3553169 +  -7.6  -2.69468   GAGGAAGAAAACAGT GCTCAGATCTCTCCCCTATCCCC GCA GGGGAGAGGG-AGAAAACAGTGC TCATATCTACCCCTA  58 172
APT61_RS16635 NONE
APT61_RS16645 3562884 .. 3562914 +  -7.4  -2.57795   CTGGTACGCCGCAAG       CGCGGAGGTGCCCT GTG ATGGCCCCTTCCCG       TCGGTTAGTGCTCAG  56 8
APT61_RS16650 NONE
APT61_RS16655 3565005 .. 3565025 +  -9.6  -3.94184   CCTCTTCCCCTTAGG            GCGCGGGC GAAAA GCCAGCGC            TTTACTGTTCCCTCT  79 343
APT61_RS16675 3572983 .. 3573023 +  -4.6  -3.24017   TGGGGAGAGGGCTGG GGTGAGGGGTACATGCGGC TCAG GCGGCG-GTTCCGTTCACC  TTACGTTCTGCACTT  50 145
APT61_RS16680 3574070 .. 3574081 +  -4.4  -4.67635   ATGCATAACGGCTCA                GGAT CGTG ATCC                 TTTTCTCCTTTTAAA  71 33
APT61_RS16685 NONE
APT61_RS16690 3575802 .. 3575813 +  -4.4  -3.01712   TCCTCAGCACCCAGG                GCAT CTCG ATGC                 TGTTCCCCGGAACCG  47 68
APT61_RS16695 NONE
APT61_RS16700 3578420 .. 3578437 + -11.3  -4.96106   GAGGCAAACGCAAAA             CGGCAAC CCGG GTTGCCG              TTTTTAATGTTTGTA 100 70
APT61_RS16710 NONE
APT61_RS16715 NONE
APT61_RS16720 3583795 .. 3583806 +  -2.2  -2.91264   ATCTTCATCGTTAAG                GCAGG AGG CC-GC                TATGTCGGTGAACAA  40 27
APT61_RS16725 3585462 .. 3585479 +  -5.5  -2.93572   ACGCCCTCCTTAACA             GACGGGG CATT CTTCGTC              ATTTCTAAGCTGCCT  51 180
APT61_RS16765 3598780 .. 3598822 +    -9  -2.90392   CGACCGCGTAACGAA GTAAGTTTTCCCCCTCTCCC TTG GGGAGAGGGGAAGTCCGTGC TCTCATTCAGGAATA  65 22
APT61_RS16770 NONE
APT61_RS16775 NONE
APT61_RS16780 NONE
APT61_RS16785 3602272 .. 3602288 + -13.7  -4.66833   AAGGTAAAAGCAAAA              CGGCGAC CTG GTCGCCG              TTTTTAGGGTTCGCG 100 73
APT61_RS16805 3605529 .. 3605539 +  -4.6  -2.83894   CACAATCCAGATCGC                 CTGG TTC CCGG                 TCTGCTGCTCCTGAT  44 522
APT61_RS16825 3613241 .. 3613251 +  -2.4  -3.53012   CGCGTCAGCCAGCCT                 GGGG CTT CACC                 TTTCGGCGCCCACCA  47 261
APT61_RS16835 3617229 .. 3617243 +  -5.7   -2.8655   CTGATGAAGGTTGTC               GTCGA TCCAC TCGAC               TATGGTGTCGATAAC  48 428
APT61_RS16850 NONE
APT61_RS16855 NONE
APT61_RS16860 3620287 .. 3620315 + -10.2  -4.77036   GACTGAGTGCTAAGA        CAAACGGGCCGC AGATA GCGGCCCGTTAC        TTTTTACTGATAACC 100 28
APT61_RS16880 3624540 .. 3624564 + -15.7  -3.14132   TTTGCATAATAGATC          CGCAGCCGCCA TTA TGGCGGCTGCA          TTAATACAGGAGACG 100 50
APT61_RS16885 3625835 .. 3625858 +  -6.7  -3.21218   GAAATAACTCAGCTA          CTGGCGC GGGAAATAAA GCGCCAG           TTCATCATCACCCGT  57 34
APT61_RS16910 NONE
APT61_RS16915 3631326 .. 3631363 + -10.5  -4.13995   AAACGGGAATAGTGC   GGCCTGATGCCCTCTCCC ACC GGGAGAGGGCCA-ACGCC   TTTACTTTCTGGAAA  85 128
APT61_RS16950 NONE
APT61_RS16955 3641265 .. 3641279 +  -2.8  -3.43492   TCACGATAAGTAGAA               CGTTCT ACT AAAACG               TTCTACTCACTATAA  47 226
APT61_RS16960 3642848 .. 3642873 + -14.1   -3.7511   GCTGCCTGACCGACA         CGTCTCCTGTA CTCT TACGGGAGACG          TTGTCTTATCAGGCA  95 44
APT61_RS16965 3643967 .. 3643984 +  -5.6  -3.31915   GCGCTCTGCTATATT             TCCATG CTTTGC CATGGA              TAATTTTTATGCCAA  54 72
APT61_RS16970 3644519 .. 3644546 +  -9.9  -2.56661   AACGGCGTTAAAAAA       GCCGGGT--GGCG GCTA CGCCTGACCCGGC        CTGTCTTCTTGCATT  66 30
APT61_RS16980 NONE
APT61_RS16985 3647457 .. 3647468 +    -3  -3.15324   TTTGAACTGTAACCG                CAAA TTGT TTTG                 ATTTTAATCACACTC  45 69
APT61_RS16990 NONE
APT61_RS16995 3648050 .. 3648067 + -12.7   -5.4505   AGGTATCCTGTGAAA             GACCGCC GAAA GGCGGTC              TTTTTTATTGCAGCA 100 50
        purE NONE
APT61_RS17005 NONE
APT61_RS17010 3651265 .. 3651282 +    -2  -5.19212   CGCATCACCCGCGAA             GTAGTCG TTTAC CGAC-AC             TTTTTTGCTGGTCAT  80 373
APT61_RS17030 NONE
APT61_RS17035 NONE
APT61_RS17040 3657795 .. 3657818 + -13.8  -5.04597   TTGCTGTTTTTATCT          CGCCCCGCCA TATT TAGCGGGGCG           TTTTTATGTCTGGAT 100 89
APT61_RS17045 NONE
APT61_RS17050 NONE
APT61_RS17055 NONE
APT61_RS17060 3662525 .. 3662537 +  -2.6  -5.40474   AACCGGATTGCTTTG                CTGG TTAAC CCGG                TTTTTTTGGCAACAT  84 392
        copA 3665212 .. 3665225 +  -2.3  -2.78807   TGCACCGCCCTTTCC               CACGC GCTA GCATG                AATTTTTTCCATCCT  40 66
APT61_RS17075 3666206 .. 3666216 +  -3.2  -4.30987   CTCTTCTGAGGCGTA                 TGCT TAG AGCG                 TTTATTGTCCGGGCT  60 187
APT61_RS17080 3666782 .. 3666816 + -10.7  -2.63723   GAAAACCATCCAACC    GCTG-GCCGGGTAAGCG AAA CGCC-ACCCGGCACGGC    CTTCATTACTGCCAG  72 83
APT61_RS17090 3670026 .. 3670046 +  -9.9  -2.54896   AAACTATTACTCGGC            TTTTTGGTT TTA AACCAAAAA            TGGATTAACTCAGCA  66 208
APT61_RS17095 3671820 .. 3671835 +    -9  -5.10154   AACAAACACTAAAAA              GGCAAC TCAC GTTGCC               TTTTTGCTTTTACCT 100 92
APT61_RS17145 3681996 .. 3682006 +    -4   -3.1372   AATAAAGCTGGCGGT                 TGAT CTG ATCA                 TGTTGCTGGAAAATC  48 79
APT61_RS17160 NONE
APT61_RS17165 3690805 .. 3690820 + -11.8  -5.77853   GTTAACAGTTAAAAA              GGCCGC TAAT GCGGCC               TTTTTTTTGGCAATT 100 59
APT61_RS17170 NONE
APT61_RS17175 3692086 .. 3692100 +  -8.6  -2.54523   CCTAACTGTTACTAT               CCACAA ACA TTGTGG               TCACTTAAAATATAC  60 230
APT61_RS17180 3692628 .. 3692664 + -17.3  -2.67992   CCTGAAGCCTGTCCC    GGCCTGCCGCCTATAGC CTC GCTGTAAGCGGCAAGCC    TGCTGTCCTGCTCTA 100 36
APT61_RS17185 3694653 .. 3694676 + -16.7  -2.76573   AATCACACGACTAGC          GCCCGGCGG AGTGTA CCGCCGGGC           ATTATAATTATTCAT 100 27
APT61_RS17210 3701635 .. 3701663 + -17.7  -4.07568   GGGGAGATTCAAAAA        TGTCTGACTGTAA TCA TTACAGTCAGACA        TTTTCAGCAGGAAGG 100 106
APT61_RS17230 3703381 .. 3703395 +  -4.2   -4.3129   TTCAGTACGGGTCGC               CTGCTG CGC CAGCAC               TTTTGATGGTGAATC  65 368
APT61_RS17240 3704768 .. 3704787 + -13.6  -4.27062   GGGCACATACAAAAA            CGGCAACC TCTC GGTTGCCG             TTTGCTTTTACTTAA 100 83
APT61_RS17270 3711867 .. 3711884 + -11.3  -3.14683   GGTAAAATAAAAAAA             GCCAGAC TATC GTCTGGC              TTGCTGGAAGGGTCT  76 31
APT61_RS17280 NONE
APT61_RS17285 3715775 .. 3715797 + -10.7  -3.96327   TATTTATAAGATTCA           GAGGTCATA ACTGG TATGACCTC           TTTATCCTGGCAAAT  85 516
APT61_RS17335 3726583 .. 3726607 + -13.6   -3.6959   CGTTAATACTGCCTG          CTGACCCGGC GCCCG GTCGGGTCAG          TTTGCCTGCTCATGT  93 35
        ampG 3728472 .. 3728482 +  -6.8   -2.8789   ACCCGGTAACACGTT                 CCTG ACA CAGG                 TCTAATGATGTTTAC  54 403
APT61_RS17345 NONE
APT61_RS17350 NONE
APT61_RS17355 NONE
APT61_RS17360 NONE
APT61_RS17365 3733376 .. 3733391 + -10.4   -5.4505   CACCGGTAAATAAAG              GGGTGC TTCG GCACCC               TTTTTTATTCGCCAA 100 45
APT61_RS17370 3735071 .. 3735089 + -10.3  -5.72622   GCAAATTAAAAAAAA             GAGCCGT TTTGC ACGGCTC             TTTTTTATTTATCCG 100 218
APT61_RS17380 NONE
APT61_RS17385 3737237 .. 3737255 + -14.6  -5.56264   GAGGTAAAAGCAAAA             CGGCAACC AAA GGTTGCCG             TTTTTTATGTTTCCG 100 64
APT61_RS17395 NONE
APT61_RS17400 NONE
APT61_RS17405 NONE
APT61_RS17410 3743046 .. 3743073 + -11.3  -4.13728   GATTCAAATAAAAAA        GCCCGGTGGCGC TTCAC GCGT-ACCGGGC        TTTTCAAAGTCTCTG  87 30
APT61_RS17440 3747671 .. 3747682 +  -5.8  -3.61178   TCGCGCCTTTTTCAC                TCCC GTAA GGGA                 TTTCAAATCAGTGGC  59 256
APT61_RS17445 3748619 .. 3748636 + -11.3   -5.5604   CCACCCGGCAAAAAA             GCCAGCT CAAG AGCTGGC              TTTTTTATTGCTTAA 100 56
APT61_RS17485 NONE
APT61_RS17490 3756738 .. 3756755 + -14.1   -5.4505   CACGGTTTACGAAAA             GGCCCGC AGAT GCGGGCC              TTTTTTATTGGCGAG 100 45
APT61_RS17520 NONE
APT61_RS17525 3768603 .. 3768635 +  -6.1  -3.57263   CCACAACCACGCCGC      GCCGCGCACGCCG CTGGAGT CGCCGTGCACCGC      TTTGCGGATCGGCGT  59 126
APT61_RS17535 3770540 .. 3770559 +   -15  -5.64274   TTACGCCAGAAATCG            GAGCCGGG TTAA CCCGGCTC             TTTTTTTATAGATAA 100 45
APT61_RS17565 3774295 .. 3774337 +  -8.6  -4.84529   TAAGTCCTGACCGAC TGCCGGACGTCAGGCCGCCAC TTCG GTG-CGGT-T-ACGTCCGGCG TTTTTCGCTTTGTAG  88 31
APT61_RS17600 3781515 .. 3781525 +  -5.4  -3.05935   AAATCTGAAATGAGA                 GTGA ATT TCAC                 TTAAGTAAAAAATCT  51 321
APT61_RS17610 3782001 .. 3782057 +  -8.1  -4.17089   TTAGCGCCATACACT TCGCCCGGCGATC-GTCAACGCGCTGGG CAAA CCAGGCG-GTTGTCAGATTG-CGGGTGA TTTTCGGGCTTTCAA  75 42
APT61_RS17625 3785784 .. 3785814 + -11.3  -2.81272   TAATTAATACTCCGC      GGGCAAAC-GGTTG ACGC TAACCAGTTTGCCC       CTTTCCATCGTAATG  74 38
APT61_RS17640 3790750 .. 3790762 +  -6.2  -3.21099   GCGTTAATCCGTATT                GCCG GGTAG CGGC                TTCGTCCTGCCCGGC  55 34
APT61_RS17645 3792872 .. 3792887 +    -6  -2.71791   GGTGAAAACCGCATC              GGACGG TCCC CCGCCC               CTTTGGGAAGAGGGT  51 317
APT61_RS17670 3797444 .. 3797470 +  -6.5  -2.67501   CTGTTGACCGGCCAC         TGATGCGACGC TCCCT GCGCCACATCA         TCCTCTCGCTGTTTA  53 23
APT61_RS17675 NONE
APT61_RS17680 NONE
APT61_RS17685 3801435 .. 3801467 +  -9.8  -2.56596   GCCCACGACGCAGTC     AATGCCGGGTG-GCG GTTG CGCTCACCCGGCCTG      TACATTCCTCAACAC  66 41
APT61_RS17690 NONE
        fbpC 3804641 .. 3804692 + -13.6  -4.28432   GTACTCCCTTTCCAT TCAGGAGGAGATACCGCGTGCCGC TCTT GCGGCACGCGGTAGTTCAACATGC TTTTCCGTTCGGATT 100 44
APT61_RS17705 3806892 .. 3806905 +  -3.7  -3.08679   TTCATTCGGAATAAT               CCGGG TCAT CCAGG                TATTCCATACGACAG  45 243
APT61_RS17735 3815414 .. 3815433 +  -7.2  -2.82279   TGACATAACTAATTT            TAGATTCC TAGG GGGATCTA             TGATCTGTTTACTCC  57 470
APT61_RS17765 3823380 .. 3823422 + -10.7  -4.32804   CAATATTTCAGGAAC GGACGTGAACGTCCGCTTCTG GCA CA-AAGCGGACATTC-CGGCC TTTTACATTCGTTCT  91 57
APT61_RS17780 NONE
APT61_RS17785 3829289 .. 3829310 +  -6.5  -3.69395   TGCTTGAGGCGGAGT           GAGGGGCTA TCAT TGCCCCCTC            TTCTTCCCTGATGCC  63 24
APT61_RS17790 3829728 .. 3829759 + -10.8  -2.90723   AGAGTAATCCCTTAC      TCTGGCCCTCTCCC TCAA GGAAGAGGGCAGGA       TGTCGTTACACCTCC  74 66
APT61_RS17815 3836191 .. 3836205 +  -4.2  -2.62792   CATCTTATCCGACCA               TCCTGC AGC GGAGGA               GTATTTGCCATGAAT  44 80
APT61_RS17820 3837802 .. 3837818 + -15.1  -4.00532   TAACCTGGATAAAAA              GGGCCGC ATC GCGGCCC              TTTACTCTTTCACCC 100 38
APT61_RS17835 NONE
APT61_RS17840 3841579 .. 3841594 +  -3.2  -3.45839   AGAATAATCCCGCCC              GCATCG CCGT CTATGC               TTAATGTTTAAAAAT  50 147
APT61_RS17845 NONE
APT61_RS17850 NONE
APT61_RS17855 3845469 .. 3845488 +  -4.8  -3.53012   CCTGGATAAATTGCT            CAGCGGCC TGCC GGACGCCG             TTTAAGGAGGAACCA  55 1
APT61_RS17860 NONE
APT61_RS17865 3847340 .. 3847366 +  -2.2  -4.25104   CCAGCCCAATATTCT         GGTGAAGAACGC CGC GCTTTCTTCAAG         TTTTGATACGGCCAG  59 361
APT61_RS17880 3849172 .. 3849201 +  -5.6  -3.03771   GCGATAACGCGTTGA       GGCTGG-CCGCAC CCGGC GAGCGTACCAGCC       TCTTACCCCCTCTGG  51 60
APT61_RS17885 3849830 .. 3849851 +    -8  -3.01924   CAGCTGTTACTGAAA           CAGGTCTC ATAAAA GAGGCCTG            TATTCCGGGAAAATA  60 14
APT61_RS17890 3851013 .. 3851034 +  -2.9  -4.66163   CTCGACGGGTAAAAC           TGCTGCAAC AGGC GTGGCAGAA            TTTTTAAATACAAAT  68 98
APT61_RS17895 3852162 .. 3852186 + -11.4  -2.79952   AAATAACGGTAAAGC          GACCAGCGGG GCTGA CCGGCTGGTC          ATTCTCTGTAATTTT  76 35
APT61_RS17910 3856595 .. 3856605 +  -2.4  -3.61178   ACCGCCTCAACCTTC                 GCCG GGC CGTC                 TTTCAGCTGCGTCAG  47 414
APT61_RS17925 3859979 .. 3859998 +  -7.8   -5.9218   TCGCGAAATAAAAAA            CCCGGCGCG GTA TG-GCCGGG            TTTTTTTATTGTCTG 100 43
APT61_RS17945 3864071 .. 3864097 + -10.1  -5.00616   CACACATCGTATCAG        GCCCGGTAAGCG TGAG CGCC-ACCGGGC         TTTTTTACAGCCCCA 100 88
APT61_RS17955 3866171 .. 3866190 +   -15  -3.38991   GCTTAAGTAAAAAAG            CAGGCCGC TGTC GCGGCCTG             TATTATTCAGAGGAT  93 31
APT61_RS17995 3873431 .. 3873452 +  -8.7  -3.91084   AATAAGATCCACTCG           CCTGGCATA ATCT TTTGCCAGG            TTTCGTTGCCGGTCA  72 36
        fadE 3877485 .. 3877501 + -10.8   -5.4505   TTCAGTGCTAAAGAA              CCCCGC CTGGT GCGGGG              TTTTTTATTGCCACC 100 46
APT61_RS18015 3878409 .. 3878434 + -16.3  -3.75024   TGATAAAATGACAAA         GGCCTGAATCA TTGC TGATTCAGGCC          TTCTTAATAGTGGCG 100 90
APT61_RS18030 3880037 .. 3880058 +  -6.5  -4.40221   TATTGCCGCGTGGCG           CCC-ACGGCG GCA CGCAGTCGGG           TTTTCGCTTTACTTT  72 54
APT61_RS18040 NONE
        mltD 3882975 .. 3882996 + -11.6  -5.86976   AACCTGAAGTAAAAA           GGCACCGA TTCCCC TCGGTGCC            TTTTTTGTTTTATCC 100 48
APT61_RS18065 3887047 .. 3887076 +   -10  -5.32882   TTCCGGGCTGACCAG       GCGATCGTTGCA ATCCAG TGCTGCGATCGC        TTTTTTATCGTCCTG 100 97
        metN NONE
APT61_RS18115 NONE
        metQ 3896907 .. 3896924 + -12.7  -3.64915   TGTAATATCATTCAT             GACGGGC GAAA GCCCGTC              TTGTCATTTATGCAG  90 52
        rcsF NONE
APT61_RS18130 3898161 .. 3898176 +  -6.1  -3.07043   ACTTTTTTTGTGTCA              GGCTG CCCTGT CAGCC               TGTTCCAATCGTCGA  53 90
APT61_RS18135 3899939 .. 3899954 + -11.8  -5.67283   ATAAGCCACAAAAAA              CCCCGC TTCG GCGGGG               TTTTTTATTTCAGTT 100 37
APT61_RS18155 NONE
APT61_RS18160 3902317 .. 3902344 + -12.8  -3.05963   CGAGTCCTGATCCTT        TGTAACGGGCAG CCTG CTGTCCGTTACG         TATTCCACTCCAGCT  83 31
APT61_RS18265 3926959 .. 3926974 + -11.8  -5.17353   GACGCATGATAAGAA              GCCGGC AAAT GCCGGC               TTTTTTAATGGCTAT 100 32
APT61_RS18270 NONE
        dapD 3930561 .. 3930576 + -11.8  -5.76633   CGGGTATAACAAAAA              GCGGGG GCAA CCCCGC               TTTTTTTATATCTGA 100 42
APT61_RS18280 3931112 .. 3931130 + -14.6  -4.36595   TGCAAACACTAAAAA             CGGCAACC TCT GGTTGCCG             TTTTGCGTTTCCGTA 100 92
APT61_RS18300 NONE
APT61_RS18305 3937148 .. 3937165 +  -4.1   -4.2123   AGCCACTAATTTTCT             CGAGGAT CACG ATGCTCG              TTTATTGGCTGGATA  62 32
APT61_RS18310 3937794 .. 3937812 + -14.6    -4.946   GTCATAAAAGCAAAA             CGGCAACC CAG GGTTGCCG             TTTTTAATGTTTGCT 100 34
APT61_RS18325 3941211 .. 3941237 + -15.9    -5.626   GCAAATCAACCGCAG        GCCGGGTGGGCG TTAG CGCC-ACCCGGC         TTTTTTTATCGGCTC 100 101
APT61_RS18360 NONE
APT61_RS18365 NONE
        dksA 3954526 .. 3954549 + -18.2  -2.76265   GTCATAACGCTATCA          CAGGCGGGAG TCTT CTCCCGCCTG           ATTACTTTCTGCGCT 100 51
APT61_RS18375 NONE
        pcnB 3956901 .. 3956914 +  -3.1  -3.08133   CTCCACGTCGCGAAG               GCG-CA GCA TGACGC               TTGCGTACATCGCTA  43 15
APT61_RS18385 3957405 .. 3957429 +  -7.3  -2.55015   AGAAATTTTTAGTTA          TTAACCATGAA ATA TTTGTGGTTAA          TCGGTTACCTAAAAT  56 43
        panB NONE
        panC 3959186 .. 3959197 +    -3  -4.25283   CTGAGCATAACCATG                CTAA CGGA TTAG                 TTTTCCTCCGCCCCT  59 44
APT61_RS18400 3959620 .. 3959632 +  -7.7  -2.89447   GAAAGCGATTCCGGT                TCAGG TCG CCTGA                TCGTTATCCTTGCGG  59 13
APT61_RS18425 3963995 .. 3964011 + -12.3  -5.22943   CAGGTAAAAGCAAAA              CGGCAAC CCG GTTGCCG              TTTTTTGGCTTTGCT 100 66
APT61_RS18435 3967252 .. 3967278 + -15.9  -5.26316   GTTTAAAAGCTCCGG        GCCCGGTAGGCG TTAG CGCC-ACCGGGC         TTTTTTATACGGTGA 100 66
APT61_RS18445 3969379 .. 3969398 + -12.2  -3.71487   CTTTTGCTGAATTGA            TGACCGTG CAAC CACGGTCA             TTGTTAGCTATGATG  88 57
APT61_RS18450 NONE
APT61_RS18455 3971125 .. 3971140 +    -9  -3.36868   GTATAAGGCATCGGT              GGAGCA AGGA TGCTCC               TGATTTTATTTCTGT  69 35
APT61_RS18470 NONE
APT61_RS18475 3977126 .. 3977141 + -10.4   -5.4505   CAGAATAAAAAAAAA              GCGGCT CATG AGCCGC               TTTTTTATTGCCGGA 100 48
APT61_RS18500 3986255 .. 3986282 + -17.8  -3.74526   CGCATTAATCTTCTC        CCCTCTGCGTCC CGGC GGATGCAGAGGG         TTGTTACCTTCCTCA 100 33
APT61_RS18505 NONE
APT61_RS18510 3988769 .. 3988783 +    -7  -3.65351   GGATACAGTGTAAGC               CCTGCG GCA CGCTGG               TTTAGATCAGCGTGC  67 28
APT61_RS18525 3991208 .. 3991219 +  -7.2  -2.71712   CCGGCCTGCACAGGC                CGGG TACG CCCG                 ATTTACGACCCGCCC  56 53
APT61_RS18530 NONE
APT61_RS18535 NONE
APT61_RS18540 3994428 .. 3994444 +  -3.7  -3.13403   AGCATTACAGGCTAT              TGAAAAC GCG GTTTTCC              TGTTCCTGAACGCGG  46 68
        coaE NONE
APT61_RS18555 NONE
APT61_RS18560 3997701 .. 3997718 + -12.7  -4.33808   TGATTCCATAAAAAA             GGCGCAG ATAT CTGCGCC              TTTTCAGTTGGTTTA 100 472
APT61_RS18680 NONE
APT61_RS18685 NONE
APT61_RS18690 NONE
        leuD 4030268 .. 4030290 +  -9.9  -5.68438   GAGGCATCCCAGAAA           GAGTCCATG GAATA CATGGGCTC           TTTTTTGTTTCCTGC 100 348
APT61_RS18705 NONE
APT61_RS18710 4031586 .. 4031614 +  -3.2  -5.28942   AACATGCGCCAGCGG       GTAAGGTACTCCA TCGG TGAAGTGCCT-AC        TTTTTCTTTGAAATG  81 375
APT61_RS18720 4033388 .. 4033428 + -12.6  -3.28712   ATGGTCAGTTTATTA  CGCAGACGTTGCGACCAT AACGG ATAGTCGCAACGTCGGGG  TTGTGCCAAAAGCGG  87 58
APT61_RS18725 4034518 .. 4034545 + -10.6  -4.45117   CCCTGTAATATCATG        GAGTCCACCGGA GAGA TTAGGTGGACTC         TTTCTTTAACCTGTA  90 69
APT61_RS18730 4035192 .. 4035221 +  -9.4  -4.30995   TTCCGGTGTGTAACT       TATGTCCGCTGT TCGCTC AGAGCGGACATA        TTGTTTTCTGAAGAC  80 28
APT61_RS18740 4037749 .. 4037775 +  -2.2  -4.55689   CCCTTTTCTTTTTCT        GCG-GTTGCGC TAACCT GTGCGGCTCGC         TTTTATATGGATGCT  63 352
APT61_RS18745 4039393 .. 4039427 +  -6.6  -4.39166   GGGGGCCAAGATCTG     CTTTAATATATACAGT TAA ACTGTATATATGGGGG     TTTTCATGTCTGAGC  74 418
APT61_RS18755 4039942 .. 4039972 +  -5.5  -4.30014   CCACTCAACTCGCTT      TGCACGTGCGTC GGCCAGTA GG-GCACGTGCA       TTTTCACTTAGTACA  69 124
APT61_RS18780 4045593 .. 4045615 +   -17  -4.53303   CGCATAAGGTATAAA           CAGCGCGGCC AGA GGCCGTGCTG           TTTTGTATGAACCTG 100 45
APT61_RS18805 4053016 .. 4053042 +    -3  -3.59262   GATAACGCCGGCGAA         GGGATTTGAG GCTGTCG CTCAAAATCC         TTTGCCACTCTCAAA  49 140
        tbpA NONE
        thiP NONE
        thiQ 4056782 .. 4056809 +    -7  -4.58786   TGCTGTGCTGGTGCA        GGGCATGCTCGGT TTT ATCGAGCA-GCGC        TTTGTTCTTCTTCAT  79 487
APT61_RS18835 NONE
APT61_RS18840 4061641 .. 4061660 + -12.8  -5.14563   AACAGGGGAACCTTT            GGCCTGCC GCAG GGCGGGCC             TTTTTTCCTGGAGGA 100 39
        araD 4062452 .. 4062472 +  -5.4  -5.18371   GCAATACACCCGTAA            CCAGGC TATACTCAC GCCTGG            TTTTGTTTTATGAGA  85 103
APT61_RS18850 4064921 .. 4064937 +    -3  -2.75535   CCCATTATTCAATTG             CCG-TCA TTTA TGATCGG              TGGTTGAACTATTGC  42 94
APT61_RS18855 NONE
APT61_RS18860 4068812 .. 4068856 +  -5.6  -2.77523   CAGGCATCTTCCAGG GTAGGCCCGCGCTG-TGCCTG CTGC CAGCCACCACCGCCCGCCTGC TGCTGTTGATAGCCG  47 277
APT61_RS18870 4072030 .. 4072040 +  -8.2  -3.43071   GATTTACAACGTAAT                 CCGC ATT GCGG                 TTAATTGATATGGAA  66 48
APT61_RS18875 NONE
        pdxA NONE
        ksgA NONE
        apaG NONE
        apaH 4076667 .. 4076678 +  -2.2  -3.54424   GCAGGCAGCAATGGC                TTCG TCAA CGGA                 TTTGACCCACTCAAC  47 309
APT61_RS18915 4082796 .. 4082817 + -14.5  -5.66684   CACCAGACCGAACAA           TGCAGTGGC TCAG GCCACTGCA            TTTTTTTATCAGTTA 100 47
APT61_RS18950 4091454 .. 4091476 + -12.8    -5.055   ACCTGAATGAAAAAA           TGCCAGTCAT TCA GTGACTGGCA           TTTTTTAAACCTTAC 100 9
        rpsT 4097916 .. 4097930 +  -8.5  -5.66684   TGCTTGTTTAAAGAA               CCCGC TTAAC GCGGG               TTTTTTTATGCCTTC 100 55
APT61_RS19005 NONE
APT61_RS19010 NONE
APT61_RS19015 NONE
APT61_RS19020 4107833 .. 4107843 +  -2.4  -3.04461   CGACCATGCCGTATA                 GCAG GAA CAGC                 TGTTCCGGGTGGCTG  41 342
APT61_RS19040 NONE
APT61_RS19045 4113159 .. 4113176 + -14.1  -2.69042   AGCAGTAATGCAAAA             CCCCGCC AGCT GGCGGGG              TGAGTTTAATGGTGT  88 33
APT61_RS19075 4120828 .. 4120843 + -11.8  -5.97575   GTCAGCAATTAAAAA              CGGCGC ATTT GCGCCG               TTTTTTTTATGCCTT 100 48
APT61_RS19085 4122739 .. 4122754 +  -2.5  -4.10566   CTGTGCCATTAACCA              GCGTG CGACGC CATGC               TTCTTCTTCTTCGGT  59 351
        yjjX 4123693 .. 4123704 +  -7.2  -4.57073   GCCTGATAAGCGCAG                CGCC ATCA GGCG                 TTTTTCAACAGGATA  80 96
APT61_RS19110 4127915 .. 4127934 + -13.6  -5.64274   GAAATAAAAGCAAAA            CGGCAACC TACA GGTTGCCG             TTTTTTTATGCCTGC 100 34
APT61_RS19130 NONE
        lplA 4133451 .. 4133489 +   -16  -2.88491   CGGTAACGAACTGTC   TTGCTTCCTCCCTCCCCC AAA GGGAGAGGGAGGAGGAGA   TAATTACTCTTTATC 100 35
APT61_RS19160 NONE
APT61_RS19165 4140730 .. 4140744 + -11.4  -3.61178   GACCACGCCGGTACG               CGGCAG ATC CTGCCG               TTTAAGGTGCATCGC  74 350
        rsmC 4147946 .. 4147970 +   -10  -4.57569   AGTAACGTCTCCCTC          CGGCCTGATC TGCGC GATCAGGCCA          TTTTTGCAACGATCA  91 36
APT61_RS19210 NONE
APT61_RS19215 NONE
APT61_RS19220 4148492 .. 4148512 +  -6.7  -4.06687   CGCAACACATGATGG            CAGCAGCAC AAA GTGCCGCAG            TTGTTTATGCCAGAT  66 122
APT61_RS19230 4149662 .. 4149692 + -18.4   -4.2349   TCTCCCAACAAATAC       TCAAAACGGCGACC TCT GGTCGCCGTTTTGC       TTTTACCTATGCCAC 100 67
APT61_RS19240 4151834 .. 4151867 +  -3.9  -3.63515   GACGTTTGCCTGTAA    CC--CCTGCGCCAGA TGTGAC TCTGGCGCAGACAGG     TTATTACGCGTCAGG  55 26
APT61_RS19255 NONE
APT61_RS19260 NONE
APT61_RS19265 NONE
APT61_RS19270 4156099 .. 4156138 + -18.6  -2.73771   TCTCCTGATTTTTCA  GGGGGGCAGGAAGTGG-CT ATC AGACCTCTGCCTGCCCCCC  TCCTCTCTGTGCTAC 100 33
APT61_RS19275 NONE
APT61_RS19280 4157484 .. 4157510 +  -2.9  -3.97947   GAGTATTAGGATATT        TTCCCG-GGAAC TCCG GTGCCGCGGGGG         TTTATACTGCCTGCC  56 32
APT61_RS19285 4158070 .. 4158095 + -14.7  -3.06492   ATCTCCTGATCCTCT         CGCGCCGCGAC AAGC GTTGCGGCGTG          TATTCCCCTGCATAA  91 32
APT61_RS19290 4160580 .. 4160602 + -13.4  -4.24342   ATTGACTCAAAAACA           GCGCCCGG ACTCACC CCGGGCGC           TTTGTTCGTACGAAG 100 40
APT61_RS19305 NONE
APT61_RS19310 NONE
APT61_RS19315 NONE
APT61_RS19320 4167447 .. 4167492 +  -3.9  -3.53343   GCTCCTCTCCCTTTT GGGGAGA-AGGAGAAACCATAC CGC GCACGGTCTGTCCCCTCTCCCC TTTGGGGAGAGGGTT  52 55
APT61_RS19325 4168720 .. 4168736 +  -3.6  -4.03234   ATTACGGCAATATGG              GCTGCA TCAGC TGCCGC              TTTGTCTAGGAGACC  58 0
APT61_RS19330 4169541 .. 4169554 +  -2.4  -3.17146   GACAACAATAAATCC               GTCT ACTAAG AGAC                TGTCTTATCAGACGA  43 17
APT61_RS19335 4171057 .. 4171070 +  -2.3  -3.48276   GGCGGCGCAGAAGAT               CCACT GAGG AGCGG                TTATGTGCCAGAGCC  47 19
APT61_RS19340 4172140 .. 4172159 +  -3.4  -3.42702   CCCCGTTATGGATTT            CGCCACCA GTGG TGGCAGCG             TATTGTTCAGTAGTG  48 202
APT61_RS19345 NONE
APT61_RS19350 NONE
APT61_RS19355 4174766 .. 4174778 +  -4.8  -3.71873   ATGTCAGTATCCAGA                CGGT GGCAA ACCG                TTTAAATCTAAATAA  56 307
APT61_RS19365 NONE
        hpaC 4177193 .. 4177216 +   -16  -4.48713   CCGCTTAATGCCCTT          CGCCAGCCGG AATA TCGGCTGGCG           TTTATTCTTCCTCCC 100 33
APT61_RS19375 4178035 .. 4178045 +  -5.4  -2.90496   CCGCCAGCAATCTGC                 TTGC CGT GCAA                 TAATTTAGAAGAGAA  49 12
APT61_RS19380 4179834 .. 4179867 + -11.7  -3.50715   TCCTGAATTAACCCT     CAAAACGGGCTTGCT GAAA AGCTGGCCCGTTCTG      TTATATCGGCCTTCT  83 30
APT61_RS19385 NONE
APT61_RS19390 NONE
APT61_RS19395 4182585 .. 4182611 +    -8  -3.54741   ATATGTTAAAAACAG         GACCAGAACC TTTATGC GGTTCTGGCC         TTTCGCAACCTAATC  66 48
APT61_RS19400 4185346 .. 4185366 +  -5.4  -2.96321   GGGCAACACGAAGGA            CGACTGTG TCGCT CACAGTCC            TGATCTTTTAATAAA  51 2
APT61_RS19405 NONE
APT61_RS19410 NONE
APT61_RS19415 4189856 .. 4189868 +  -6.3  -2.78018   TCTATAATTTGGTCG                CTTAC TGT GTAAG                TAGTTCATCCAACCT  54 183
APT61_RS19420 4190348 .. 4190358 +  -6.8  -3.06501   AGCTGGCGCAGCATT                 CCGA TAA TCGG                 TTGGATAAAAATGTG  55 80
APT61_RS19425 NONE
APT61_RS19430 NONE
APT61_RS19435 4194475 .. 4194488 +  -5.3  -3.74693   GGATAGCAGAGGCTG               TGTTC TGGT GAACA                TTTCATCCAATAGAA  59 126
APT61_RS19440 NONE
APT61_RS19445 4196498 .. 4196520 + -10.6  -4.07568   GGAAAGTAAACGCAT           CAAGGTATGC TAT GCGTGCCTTG           TTTTAGCGACACGGA  85 32
APT61_RS19450 4197527 .. 4197543 +  -9.4  -3.91897   GTCATCATTAACTCC              TGGGGC GTTAA GCCCCA              TTTATGAATCAGGCC  76 40
APT61_RS19455 4198120 .. 4198141 + -14.4  -4.46212   TACTTCTGAGTCCCA           CGCCCCGC AGTGAC GCGGGGCG            TTTTCTGATGCACAG 100 32
APT61_RS19460 NONE
APT61_RS19465 NONE
APT61_RS19470 NONE
APT61_RS19475 4203734 .. 4203758 +  -7.8  -2.71011   CAAAAGCCTAACCTT         G-CTGCCGGGC TCCA GCCCGGCAAAC          TGATTCAGGGAACGT  58 30
APT61_RS19480 NONE
APT61_RS19485 4205742 .. 4205773 +  -2.9  -2.73529   CTGTCCTTTACGCGC      GTAAGGCTCTGGC AAGATC GCCTCAGCATTAC       TCACTTTCTCTCACA  41 153
APT61_RS19490 4208043 .. 4208076 +  -4.5  -3.23018   AGGGTGTCAATATTC     CCTCTCCCCTTGG GGAGAGGA TCAGGGTGAGGGG      CTTTTCCTGTCTGGA  50 84
APT61_RS19495 NONE
APT61_RS19500 4209272 .. 4209300 + -13.3   -2.8733   GAAAAAATAAATGCT        GCACTCCCTTT AATAACC AAAGGGAGTGC        CTGTTTTATAACCAA  85 31
APT61_RS19505 4210251 .. 4210280 + -14.2  -3.14132   GCCCGTTCAGGCGCA       GCGCCGCCGGGC AACATA GCCCGGTCGCGC        TTAGTCAGGGCAAAC  90 100
APT61_RS19530 NONE
APT61_RS19535 4217769 .. 4217780 +  -7.2  -2.62184   GGGACAACGCCGGGT                GGCG GCTT CGCC                 TGATCTGGGAAACAC  56 45
APT61_RS19540 4219344 .. 4219380 +  -4.5  -3.36327   GAACATGATCCCGAT   GGTGGTGATGCTGGC AAACCCGAC GCCGGCA-C-CCACC   TTCTCCATCACGTGC  51 205
APT61_RS19570 4223338 .. 4223358 + -15.5  -4.55295   TTCTAAAACAAATAA            GCCGCATAC GCT GTATGCGGC            TTTCTTTCTGGCAGG 100 35
APT61_RS19595 4227537 .. 4227560 +  -5.2  -3.05384   CACGTCGCTGACGCC          GTGC-GGCCCG ATC TGGGTCAGCGC          TTCGGTGAAGGCCAG  49 189
APT61_RS19605 4229391 .. 4229403 +  -3.3  -3.96148   CATTAAGGTATGAAT                TACCG CCA CGGTC                TTTATAATCGACGCG  55 84
APT61_RS19610 4230014 .. 4230053 +  -2.1  -4.73448   TACAGATCCGCTAAA  ACAGTATCTGAATGCCGT TTTTT GCGGCAATCTG-TACTGG  TTTTTAGATCTGTAT  67 339
APT61_RS19615 4231904 .. 4231921 +  -6.3  -3.01791   TTTTGACGTCATAGC             TGAGCCAG CCG CTGGC-CA             TATTGCGCGGCGCAT  51 424
APT61_RS19635 4235608 .. 4235633 + -19.7  -3.04461   GCGGCTTAGCGATAG         CGGCGTGGGGC CTGC GCCCCGCGCCG          TCTTAACGATCACTC 100 32
APT61_RS19645 4237652 .. 4237673 +  -7.9  -3.34013   AGGGTGATGCAGCAG           TTCCGCGGC AATG GCCGGGGAG            TTAGTTACCACCGTG  61 397
APT61_RS19655 NONE
APT61_RS19660 4239972 .. 4239993 +  -4.4  -3.25807   ACCATTCCTGGCCTA           CGCTTATC CAATAT GAAAAGCG            GTTTTGATATCTTAT  48 151
APT61_RS19665 4241066 .. 4241078 +  -3.3  -3.18582   AATCACCATGAAAGT                CCATC GCC GACGG                TTGATGGATACAATG  46 314
APT61_RS19695 NONE
APT61_RS19700 NONE
APT61_RS19705 NONE
APT61_RS19710 4253418 .. 4253451 +  -9.5  -4.61873   GTCGCTGTAAGGGTT     GAATGCCGGGTG-GCG CTG CGCTTACCCGGCCTAC     TTTTCCTTTGTAGGC  91 31
APT61_RS19735 NONE
APT61_RS19740 4258613 .. 4258648 + -10.4  -3.75153   ACATCGACATATCCT    TGCCGTA-GCCGGACAG CTT CTGGCCGCCGTGCGGCA    TTTCGCTTACCAGCA  75 171
APT61_RS19755 NONE
APT61_RS19760 NONE
        gabD NONE
APT61_RS19770 4266868 .. 4266888 +  -6.8  -3.01712   CAGGACTAATCTTTA           C-GCCCGGT GCAA GCCGGGCCG            TATTCAAGGAGCACG  55 32
APT61_RS19775 4267599 .. 4267648 + -18.2   -2.9704   GACCTGAAGAGGAAA ATACACCTTAAAACAGGCACTA TTCATT TAGTGCCTGTTTTAAGGTGCAA TGTCTGCATATTTAT 100 34
APT61_RS19780 4268256 .. 4268271 + -11.8  -4.73864   CGATTGAATGAGAAA              GGCGCC GTTG GGCGCC               TTTTATGTTGGTTGC 100 46
APT61_RS19790 NONE
APT61_RS19795 NONE
APT61_RS19800 4273312 .. 4273341 + -12.3  -4.09117   TTTTTAATGTTCTTA       TGATTGGGAGATA TATT TATCTCCCGATCG        TTATTTATAAATCAA  95 34
APT61_RS19810 NONE
APT61_RS19815 NONE
APT61_RS19820 4277451 .. 4277473 +  -5.6  -4.22948   TTTTTGCAGAAACAG           CCATGCAT GCATCAG GTGCATGG           TTTTGCATGCGTTTT  66 71
APT61_RS19860 4285550 .. 4285573 + -14.6  -3.23047   TATTATTTTTAAAAT          GCAGGAGGGT TGCG GCCCTCCTGC           TATTCACTTTATCCC  91 45
APT61_RS19870 4287263 .. 4287285 +  -5.5  -3.41051   CCGGAATGGGCTGCT          CGTGCAG-CG GCCA CGACGGCACG           TTGTGGTCAAGCTGG  53 299
APT61_RS19900 4294846 .. 4294863 + -12.7  -5.75342   GTCCCTATTCCAGAA             GCCCCTC ATTT GAGGGGC              TTTTTTTTGCCCGGC 100 13
APT61_RS19905 NONE
APT61_RS19910 NONE
APT61_RS19915 4296780 .. 4296795 + -10.4   -5.9218   ATTTACTAAGTAAAA              GGCAGC CTGG GCTGCC               TTTTTTTATTATCTG 100 47
APT61_RS19920 4298484 .. 4298519 + -12.4  -4.15833   CAAGGTCATCACCTC    CGCAGGCCCGGCAGGCG CAG CGCCA-CCGGGCAGGCG    TTTTACCCTACTGAT  95 109
        treR 4305841 .. 4305854 +  -8.1  -4.36554   GCCACCCTCTCCTGA               GCGTC AAAA GACGC                TTTATTGTGATCCTC  78 26
APT61_RS19940 4307404 .. 4307417 +  -3.8  -3.53012   TTTTCGGGGCGCCGT               TGCG CCCCTT CGCA                TTTGCAGGAACGCAA  52 44
APT61_RS19945 4309092 .. 4309128 +    -5  -5.52384   GCTACAGGCCTGATG   TTATCCGCCGGGC-ACC GCAC GGTTGCCCGGCGCACGC    TTTTTTTGATGCAAA  85 28
APT61_RS19950 4311687 .. 4311697 +  -2.4  -4.07568   GAGCACATTGTTAAG                 CCTG GAC CTGG                 TTTTCGCAAAGCACC  55 103
APT61_RS19955 4312655 .. 4312669 +  -2.1  -3.24386   GACGAAAATATCGTA              GATGGC CATC GCC-TC               TTCATACTCGCTTTT  44 138
APT61_RS20010 4321901 .. 4321926 + -14.8  -4.46155   GGAGTAGAGCTATTA         TGCAGGGGGA GAGCAA TCCCCCTGCA          TTTTATGAGTGTATC 100 34
APT61_RS20025 4324571 .. 4324609 + -10.2  -3.17685   GGTTAAAAACCGCGT   TATTTTCCCCCTCTTCCC AAC GGGCCGAGGGGGTGAATG   TTCCCTCTCTCATTC  73 35
APT61_RS20035 4327207 .. 4327232 + -11.9    -4.652   ATGTGTTAGTTTGAG         AAAAAGGGGCC TACT GGCCCCTTTTA          TTTTTCCGGTCATTT 100 40
APT61_RS20040 4328373 .. 4328403 +  -4.4  -4.25848   TTCCAGCGAGCGCGT       CGCGGCGGAAGACT GCT GGACCAGCGCCGCG       TTTTGCTGGGCGGTT  67 78
APT61_RS20070 4335684 .. 4335701 +  -9.8  -5.76949   CTTAACGTGTAAAAA             GCCCCG TCTTGT CGGGGC              TTTTTTTTGCCCGTC 100 43
APT61_RS20075 4337477 .. 4337500 + -16.8  -3.28416   GGGCATAACAAAAAA          CAACGCCACC CGAG GGTGGCGTTG           TTCATCTCAGTACTG 100 33
APT61_RS20095 4344549 .. 4344586 + -10.7  -3.60296   CAGGCAGTTCCCCCC   TGCTATGCCGGATAACAC CTT GCGTTACCCGGCATA-CA   TTTACCCTCAAAATA  79 348
APT61_RS20100 4346096 .. 4346113 + -12.7  -5.86061   AGCCAGAAACATCAA             CGGCTCC CTGG GGAGCCG              TTTTTTTTACTGCGA 100 40
APT61_RS20110 4347471 .. 4347486 +    -9  -2.66452   TGCTCACCTAACTGA              TGCAGG TACT CCTGCA               GTTCGTTATCGGCGT  57 257
        cpdB 4350575 .. 4350590 +  -3.2   -3.6692   GCGAACCGCCGCAAA              CCTGCA TGAC TGCAAG               TGTTTTGCCCTGCGA  52 493
APT61_RS20130 NONE
APT61_RS20135 4352693 .. 4352710 +  -5.5  -3.97388   TCTGGCCGCGCTGGC             GTGGCGG CTCT CTGTCAC              TTTGTAATGAGATAT  64 1
APT61_RS20140 4353591 .. 4353602 +  -5.8  -2.83249   CCAGGTAATAACGCT                GGCT GAAC AGCC                 TGATATTCTCTCGAC  52 461
APT61_RS20150 4354692 .. 4354733 +  -9.5  -5.15634   ATTTTACATCCCTCT TATTTTTAACCGGTTCCTG CTTG CGGGGACCGGCCAGAAATA  TTTTTTCCTGGAATA 100 451
APT61_RS20155 NONE
APT61_RS20160 NONE
APT61_RS20165 4357312 .. 4357323 +  -4.4  -3.85362   TTTGTTCGCTGAGGG                TGAG ATTG CTCA                 TTTGATACTTACCTT  59 469
APT61_RS20175 4358445 .. 4358464 + -13.6  -4.85129   AAGATAAACGTAAAA            CGGCAACC CAGG GGTTGCCG             TTTTTAATCTGTGCT 100 208
APT61_RS20185 4361175 .. 4361192 + -11.3  -4.69549   AACAGATAAAAAAAA             CGGCAAC CGAA GTTGCCG              TTTTGCTTTTACCTT 100 85
APT61_RS20200 4364411 .. 4364436 + -13.3  -2.79831   GCTAAATAGCGGTTC         GCCCGGTAATG CACC CTTTACCGGGC          CTGTTTTCCACTCAC  85 32
APT61_RS20230 4367639 .. 4367655 + -10.8  -6.02919   GTCATAGTCGAATTA              GCCCCC TGCCC GGGGGC              TTTTTTTATTTCTGC 100 83
APT61_RS20265 4373496 .. 4373528 + -10.6  -3.83437   TTCCTGTAATTCTCC      TCTTATCGCCAGGC ACAGC GCCTGGCGATACCA      TCTTTTACTTAGTAA  82 32
APT61_RS20270 4374417 .. 4374440 +    -3  -4.83169   ATGCGGTGTTTTACT          CCCG-CCTCCC AGA GGCAGGTCAGG          TTTTTATCCAGCCCT  73 89
APT61_RS20280 4375584 .. 4375595 +  -5.8   -4.4261   ATTTACACTGCTTTG                CGTC CATA GACG                 TTTTCCTGTTCACAA  72 60
APT61_RS20285 4375984 .. 4376014 + -11.4  -3.97689   TCTAAAAAGCATCAA       TAAAAAGCCACT AAAAAAG AGTGGCTTTTTA       TTATTTACAATTCTA  91 36
APT61_RS20290 4378525 .. 4378536 +  -2.2  -3.57144   CGCTTCAGCGACAAA                G-GGG ATC CCCGC                TTTACAGATGGCCAG  47 479
APT61_RS20300 4381267 .. 4381291 + -15.9  -3.24488   AGAGGGAGAAAACAA          TAAAGGCCTTC TTT GAAGGCCTTTA          GTTTATTTCCCGCGC 100 122
APT61_RS20370 4398687 .. 4398703 + -10.9  -2.62616   TCGAACTCGCGACCC              CGACCTT GGC AAGGTCG              TGCTCTACCAACTGA  66 329
APT61_RS20395 NONE
         psd NONE
APT61_RS20405 4405370 .. 4405391 + -13.7  -5.09225   TTTGTAAAAATAAAA           GCCAGCCGC ATCA GTGGCTGGC            TTTTTTGCCTGCGAT 100 34
APT61_RS20425 NONE
APT61_RS20430 NONE
APT61_RS20435 4411895 .. 4411905 +  -2.4  -3.27475   GACCGTGGTGGTTCT                 TGGC GTA GCCC                 TGTTCTGGTAAGGAG  45 4
APT61_RS20440 4412292 .. 4412325 +  -3.7  -3.15758   GTTTATGTGATCTTC     CTCCGCTCTCCTGCC TGTT GGTGGGAGAGCAAAA      TTCCTGACAGGTTCT  46 31
APT61_RS20445 4413325 .. 4413336 +  -4.4  -3.88703   TGAAGAGCATGCATT                CGTT TTTC AACG                 TCTTTGTTTCTGGCC  57 447
APT61_RS20455 4414538 .. 4414558 +  -9.7  -3.72893   TTTTTCGGTCAAAAA            GGCGCAG CAAAAAA CTGCGCC            TTTCATCCCGAAGTG  76 487
APT61_RS20475 4416696 .. 4416732 +   -19  -2.92102   AAAAGATGACCAAAA   GAA-AAACCCCCGGTCA TTTC TGACCGGGGGTTTCTTC    ATTTCTGCGAGGTAT 100 507
APT61_RS20495 4420267 .. 4420280 +  -9.5  -3.19192   CGGAGTGCGGTGTAA               GCGCC GGAT GGCGC                TTCGCTTACCTGGCC  70 26
        aspA 4422612 .. 4422631 + -13.6  -5.93252   GTTAATCTTCATGAA            GGCACGTC ACTT GACGTGCC             TTTTTTGTTTTTAGG 100 49
APT61_RS20510 4424034 .. 4424054 + -18.3  -3.39895   TAAAAAGAGTTAAAG            TCGGGCCGC TTA GCGGCCCGA            TTCATTAATGAGCAG 100 55
APT61_RS20515 NONE
        dipZ NONE
APT61_RS20525 4427040 .. 4427055 +  -3.2  -3.57144   GGTGAAGCGGGTATG              CGTGTC GCGG GAGACG               TTTGCCGCTGGCGCA  49 316
APT61_RS20540 4428477 .. 4428493 + -10.8   -5.0925   CACTATTCTAAAGAA              CCCGCC CAAAA GGCGGG              TTTTTGCTTTTGGAG 100 39
APT61_RS20545 4429932 .. 4429950 +  -8.8  -4.82901   TTATTACTGAGCACA             GCCCCC CTTCTGC GGGGGC             TTTTTATCAGAACCG  88 503
APT61_RS20555 4432835 .. 4432850 +  -8.2  -4.60924   CCGGCACATTTTTGT              GCCGGC AGTT GCTGGC               TTTTTGGGGGATTTA  83 66
APT61_RS20560 4433901 .. 4433923 +    -9  -3.11459   ACAGGGCAAGGCAAA           CAGGTGCCCG CAT CCGGCACCCG           TTAGCTACTGGTATT  67 42
APT61_RS20620 4449086 .. 4449104 +  -7.4  -4.35524   CCACTAAGATGTAAG             CCCTCC CCCACAA GGAGGG             TTTTGCATTTAAAGC  76 34
APT61_RS20635 4453727 .. 4453747 + -11.1  -3.64716   ATCCCTCTTTTGTCG            GCCCGGC AAGCGAC GCCGGGC            TCTTTTGCCGGATGC  81 40
APT61_RS20640 4454271 .. 4454290 + -12.8  -2.84732   AGCCCTAATCCCGGC            GGCGGGCG CTCG CGCTCGCC             TGTCATCGCTTTCAC  81 33
APT61_RS20645 NONE
APT61_RS20650 NONE
APT61_RS20655 NONE
APT61_RS20660 NONE
APT61_RS20665 NONE
        phnH 4459112 .. 4459126 +  -2.7  -2.84812   TGGCGATCCCGCGCA               CCACC CATGT GGAGG               TGTGCTGATGTACGT  42 3
APT61_RS20675 NONE
APT61_RS20680 4461031 .. 4461044 +  -3.1  -2.79878   AGCGAGGCCCTCAGC               CAATG AAAC CGTTG                CTTTCGGTCAATAAC  42 20
        phnK NONE
APT61_RS20690 NONE
APT61_RS20695 NONE
APT61_RS20700 NONE
APT61_RS20705 NONE
        phnP 4465384 .. 4465400 +  -5.2  -4.71061   GTATGACGGGATGAC              GTTAGT GCTGG ACTAAC              TTTTTCCCTCTCCCT  75 10
APT61_RS20725 NONE
APT61_RS20730 4472194 .. 4472207 +  -6.7  -2.73681   ATGAATCCCGATACG               CTGAC TTTC GTCAG                TGATTCGGGTGAATG  53 89
APT61_RS20735 4473258 .. 4473280 + -12.7  -3.09968   TGCCCCTCACCCCGG           CCCTCTCCC CATAA GGGAGGGGG           TGTTCAGATTCCCTC  84 57
APT61_RS20740 NONE
APT61_RS20745 NONE
APT61_RS20750 4475968 .. 4475982 +  -5.6  -4.25104   CGGCAAAGACATAGC               CCAGCC CAC GGATGG               TTTTAATCAGCAGCG  66 69
APT61_RS20760 NONE
APT61_RS20765 4479206 .. 4479228 + -12.7  -3.30124   GGCAGGCTAACGTCA          GC-GGGCGGG GAAA CCCGCCCGGC           TTGTGGACAGTGGAG  87 168
APT61_RS20770 4480044 .. 4480069 + -11.1  -5.44721   GGAATAGTATGGTAG         GCCCGGTAAGCG CAG CGCC-ACCGGGC         TTTTTTTACACTACT 100 77
APT61_RS20780 NONE
APT61_RS20785 NONE
        actP 4486083 .. 4486103 +  -3.1  -3.28791   AGTTTTTATGCTTTA            GTCACAGCG ACT CGCTCAGGC            TTCTGGCAAAGCGCT  47 235
APT61_RS20800 4489045 .. 4489073 +  -2.3  -3.78953   GCCGCGCCAGCGCGA        CTGGTCAGTATTG TGT CGTTACTCACCTG        TTTAATAATAAAAAT  50 66
APT61_RS20805 4490711 .. 4490721 +  -8.2  -4.07568   ACCAGATCCGGCTGC                 CCGC CGA GCGG                 TTTTGCCGCGGCCAG  71 359
APT61_RS20820 4492539 .. 4492558 + -12.2  -4.93696   GGGGTAAACGCAAAA            CGGTAACC GCCA GGTTACCG             TTTTTAGTGTTTGCA 100 34
APT61_RS20845 4498145 .. 4498163 +    -9  -4.13014   TTGGTCGTCAGAGTA             TCGATAAA AGA TTTATCGA             TTTTCAGGATATCGA  78 260
APT61_RS20860 4502099 .. 4502116 + -11.3  -5.64873   ACTGTAAATAAAAAA             CCCAGAC CGAG GTCTGGG              TTTTTTGTTGTTGCG 100 72
APT61_RS20870 4505942 .. 4505956 +  -4.2  -4.56597   GACGCAGCAGCTCCG               CCAGTT CCG GGCTGG               TTTTTAACGAGGCCG  70 211
APT61_RS20905 4513266 .. 4513295 +  -6.6  -5.63103   ATAACGGGTCAGAAA      GAAATTGGGCTTCC CGGA GGAAGCCC--TTTC       TTTTTTTAGTTCGGC 100 199
APT61_RS20930 4517696 .. 4517714 +    -3  -4.05026   CGGTCATGTCATCGT             CAGTCAGG TCG CCCCACTG             TTCTTTCACTTTACC  58 229
APT61_RS20955 4523121 .. 4523140 + -16.4  -3.35679   CCGTGAACGTGACAA            GGGGGGCC GCCG GGCCCCCC             TTGTCAATCCCCGCG 100 179
        malE 4530489 .. 4530514 + -15.5  -2.98823   TAACCCCCTCATCCC         GGCCTTCTCTC TTGA GGGAGAAGGCC          TCTCTCTCAGGGAGA 100 50
        malF NONE
        malG 4533234 .. 4533253 + -10.6  -5.80364   ACTTGTGACTGTATT            CGGCGGCC CTCG GGCCGCCC             TTTTTTTATTCCCGT 100 95
APT61_RS21010 4537584 .. 4537601 + -14.1  -5.67063   GAGTAAGATGAACAT             GGCCCGG ATAA CCGGGCC              TTTTTTTATCCTGCC 100 35
APT61_RS21025 4541440 .. 4541457 +  -9.8  -5.64274   AAACACTATCTCTAA             GCCGGG CTTGAA CCCGGC              TTTTTTTATAACTAC 100 76
APT61_RS21030 4542479 .. 4542508 +  -9.3  -2.87132   GAAGGCATGCTTTAC       ACTGAAGCCTCGT CCAC AGGAGGCTTCAGG        TATGTCCACACCGAG  65 58
APT61_RS21035 4542774 .. 4542791 +  -6.9  -4.85782   ACCCCAACCCGTGGA             AGGCGCT GATT AGCGCCC              TTTCTTTTTGCGCCC  83 17
APT61_RS21055 NONE
APT61_RS21060 4550930 .. 4550956 +  -3.6  -3.01712   AGCGCCCCAATGCGA         GGGTCGGCAC ATAGCCA GTGCCGAAAC         TCTTCCGGGAAAACA  44 164
        purH NONE
APT61_RS21110 4565551 .. 4565572 + -15.9  -2.76696   GGAGTAATCCCTTCA           CCCTCTCCC TCAG GGGAGAGGG            ATTCTTGACCAGGCC 100 34
APT61_RS21145 4570739 .. 4570753 + -11.4  -2.94806   AGTCAATTTATTGCA               TCGCCC AAC GGGCGA               TCTCCTCTTGCTTCA  78 191
APT61_RS21150 NONE
APT61_RS21155 NONE
APT61_RS21160 NONE
APT61_RS21165 NONE
APT61_RS21170 NONE
        thiH 4576228 .. 4576255 +  -3.2  -5.33785   TTACGTAACGTCATT        ATCGGGCGATTG TCAG CTCTCGCCCGGA         TTTTTTATGCTCATT  79 76
APT61_RS21180 NONE
APT61_RS21185 4577228 .. 4577241 +  -9.5    -5.626   TCAGGCAAAAAAAAA               CCCGC CGAA GCGGG                TTTTTTTATGGGCTG 100 158
APT61_RS21255 4592670 .. 4592685 + -11.8  -5.66684   CCTGAAAACAAAAAA              CCGGCG AATT CGCCGG               TTTTTTTATGACTTA 100 75
APT61_RS21315 NONE
APT61_RS21320 4604847 .. 4604869 + -14.2  -2.66695   TTCCCCGCACAGCCA           TTCCCCAGCT TCG AGCTGGGGAG           ATCTTTGGTCAGCAC  78 82
APT61_RS21330 4607924 .. 4607940 + -12.3  -4.93696   TAAGTAAAAGCAAAA              CGGCAAC CTG GTTGCCG              TTTTTAATGTTTGCA 100 38
APT61_RS21335 NONE
APT61_RS21340 NONE
APT61_RS21345 NONE
APT61_RS21350 NONE
APT61_RS21355 4613785 .. 4613799 + -12.8  -4.85195   CCTGAACGAAAAAAA               CCCGCC AGA GGCGGG               TTTTTAAATTCTTTT 100 36
APT61_RS21370 4615724 .. 4615743 + -16.4  -4.13816   AGTAATCTTGTTTCC            GCCCCCGC GTTT GCGGGGGC             TTATGTTTTTGTCAC 100 36
APT61_RS21395 4622294 .. 4622328 +  -9.4  -3.74693   GGCCAGCAAAATGCT   CAG-GCCGGGTAAGGCG AAGC CGCC--ACCCGGCGCTG    TTTCATGACATCAGC  74 57
        xylF 4626535 .. 4626565 +  -9.1  -3.04709   GCGAACTGTAATCCA      TC-AT-CGCCCCTGC CTG GCGGGGGCGTATCGA      CTTGTTCTGTTTTCC  66 30
APT61_RS21415 NONE
APT61_RS21420 NONE
APT61_RS21425 4630533 .. 4630550 + -11.3  -5.94597   GTTTAAATAAAAAAG             GCCTTCC GTAA GGAAGGC              TTTTTTTTACTATTA 100 35
        malS NONE
        avtA 4635231 .. 4635247 +  -5.8  -2.62396   GTTTACGCCAGAAAG             CGCAGCC GTTC GGC-GCG              TAATCTGGCAGGATC  51 43
APT61_RS21455 NONE
APT61_RS21460 4640302 .. 4640323 + -12.3   -3.3543   CCGGCAGAATTGAGG           CTGCCCTCG TCTC TGAGGGCAG            ATTTTTGGCGAGTTA  85 100
APT61_RS21470 4642190 .. 4642212 + -11.3  -2.74192   TATCGGAGTAGCTGA           CCAGCAGGC ATTTG GTCTGCTGG           TAATGTTCCAGCATC  66 57
APT61_RS21480 4645012 .. 4645036 +  -3.5  -3.79747   AGCCCCTGCTGAGCC          GCATGCTTTAG CAC CTGACGCATGG          TTTGCTCGTCGGTGG  55 290
APT61_RS21510 NONE
APT61_RS21515 NONE
        mtlR 4654672 .. 4654684 +  -3.4  -2.73124   TGATTTCCCGAATCA                GCTT AAAAA AAGC                GTTTCAGAAGTAAGC  42 0
APT61_RS21525 4655126 .. 4655151 + -13.3  -3.25719   GAGTTCTGATTTTTA         GCCGGGT-GGCG CTA CGCTGACCCGGC         TTACTGCTCTCCTCC  88 32
APT61_RS21530 NONE
APT61_RS21535 NONE
        lldD 4659027 .. 4659046 +   -10  -3.15228   TCCCCTCATCCCAGC            CCCTCTCT CAAG GGAGAGGG             TACTTTCTCTTTGGC  70 52
APT61_RS21545 4659861 .. 4659880 +  -3.4  -4.11216   CCCTTCACGGATTTT            CGGGTGGC GATC GCCGCTGG             TTTTGCCGGTCCCGC  60 295
APT61_RS21575 NONE
APT61_RS21580 NONE
APT61_RS21585 4666814 .. 4666842 +   -11  -4.78107   TACTCAATAACGTGA        GAGTCTGCGTGT TTTTT GCCCGCAGACTC        TTTTTGATCGTGGTG 100 64
        rfaD NONE
APT61_RS21610 NONE
APT61_RS21615 NONE
APT61_RS21620 NONE
APT61_RS21625 4675586 .. 4675600 +  -5.6   -4.3586   TGCTGCGCCAGCTTT               TCCCGC AGC GCGGCA               TTTTCATATAACTGC  69 119
APT61_RS21635 4678207 .. 4678244 +    -7  -2.77962   AACGTCCTGATCACT  C-TGACGCGCCAGGG-GA ATAA TCACCCTGGCGCGGAACG   CTTTAGCCTGTCGGC  57 31
APT61_RS21640 NONE
APT61_RS21645 NONE
APT61_RS21650 4681958 .. 4681974 + -12.3  -5.71712   GCAGAAATCATAAAA              CGGGCAT CAG ATGCCCG              TTTTTTTATCTGCGA 100 41
APT61_RS21655 NONE
APT61_RS21660 NONE
        coaD 4684705 .. 4684719 +  -9.2  -3.34013   CGGCAGTAGAAGGTG               GCGCGC TGC GCGTGC               TTCGTTGCCACAATC  67 106
APT61_RS21690 NONE
APT61_RS21695 4688730 .. 4688749 + -12.2  -2.90061   TAACGTATTAACAAA            CCGCAAAC ACCT GTTTGCGG             TCGTTGTGTGGATGT  80 69
        slmA 4689432 .. 4689445 +  -3.7  -4.41348   GGCCCGGTAAGCACA               GCGCC ACCG GGCAC                TTTATTTACACGCCA  63 57
APT61_RS21715 4691861 .. 4691893 + -10.7  -4.91511   GAACATCGAATAATC      AGAATGGGTAACTCA GCG TGAGTTACCCATTAG      TTTTTCTAATGCCAT 100 28
APT61_RS21720 4692719 .. 4692732 +  -2.3  -2.71003   AAATGGACAGAAAAA               AGCAC TTTT GTGCG                CTTATAATATATTGG  39 65
APT61_RS21725 4694550 .. 4694582 +  -7.8  -4.62783   CGCATTTTCCTTGCC     GACGCCAGGAAGCTG TTGC CAGCTTTCTG-CATC      TTTTTCGCGTAACTG  83 121
         gmk 4696993 .. 4697008 +  -3.3  -2.78816   CAAACTGTTGGCAGA              CTGAA CCCACA TTCAG               TATCATGCCCAGTCA  43 22
        rpoZ 4697334 .. 4697344 +  -2.4  -2.83082   GTCGTTAATTAAACC                 TGCG GGT CGCC                 CTTGTATCTGTTTGA  40 33
APT61_RS21745 NONE
APT61_RS21750 NONE
APT61_RS21755 4702644 .. 4702656 +  -4.8  -3.15544   GCGATAAAAGCCCAT                CAGC GCCAG GCTG                TTGCTGAGGATCACC  47 437
APT61_RS21765 4705132 .. 4705146 +  -2.9  -3.43007   TGCGCATAAATCGTG               CATAA CTCCT TTATG               TGTGTTTTACGTGAT  47 106
APT61_RS21770 4707279 .. 4707294 +    -6  -3.38991   TTCTGGTCGTTATTG              CCCAGC GCCA GCAGGG               TGTTGTTGCGCACGT  56 422
APT61_RS21785 4711348 .. 4711373 +  -9.2  -3.08088   CATTTCAAAAGATAA         TATGTAACGT CTTCAT ACGTTACATA          TATCTTCAACAGTTT  66 298
APT61_RS21790 NONE
APT61_RS21795 4714069 .. 4714083 +  -4.2  -4.02736   TAAGGATATTAGTTT               TCTCGC AGG GTGGGA               TTTATAATGTCGATT  60 4
APT61_RS21800 4715134 .. 4715166 +   -18  -3.39803   ATGAATAATTCTGAT      GTTTATACTGGTGC ATTTC GCACCAGTATAAAC      TTATAAATATGCATA 100 125
APT61_RS21810 4715996 .. 4716020 +  -9.9  -2.52635   TTCCCCCTCACCCCA          GCCCTCTCCCC AAA GAGGAGAGGGA          GTTAATCGTGCCAGT  66 67
APT61_RS21820 4716757 .. 4716786 +  -3.5  -4.16943   CGCGCCAGCAAATTC       TGCGCGACG-CGTT GAA AAGGTCGTAGCGCG       TTTTCCCCTCTCCCA  60 0
APT61_RS21835 4719238 .. 4719252 +  -2.8  -3.15228   CAGCAGGTTGCCCTT               GAGG TGATTAT CCTC               TGATTATTTTGTCCT  45 8
APT61_RS21840 4719811 .. 4719836 +  -2.7  -3.21934   TAACTCCGCCAATAC         TTGGACAAAAT AATC ATTTTGTGTAA          CTTTTATAGAGAGAC  45 71
APT61_RS21845 4720882 .. 4720901 +  -7.9  -6.10489   GCACTACCCCGTTTA            GACGACA CCTCAC TGTCGTC             TTTTTTTTTGCACTT 100 80
APT61_RS21850 4722507 .. 4722529 +  -8.4   -3.6682   TGGTCGGATCATTGG           GGATGGCG ACAGTTG CGCCGTCC           TTTAGCTCAGTCACG  69 473
APT61_RS21865 4725459 .. 4725472 +  -3.7   -3.4252   TCAGTTGTCGTCCCA               GCCCG CTGC CGCGC                TTCTCGTCGCTGACC  49 210
APT61_RS21875 4726316 .. 4726340 +  -8.6  -5.00616   ATTACTGATTACGCA          TTAAGGGGCC ATGCA GCCCCCTTAA          TTTTTTACCGCCGCA  88 33
APT61_RS21885 NONE
APT61_RS21890 NONE
APT61_RS21895 NONE
APT61_RS21900 NONE
APT61_RS21905 4732513 .. 4732530 + -11.3  -5.18355   AAGACAAAAACAAAA             CGGCAAC GTCT GTTGCCG              TTTTTCGTTTTTGCC 100 43
APT61_RS21910 4733593 .. 4733605 +  -4.7  -4.26188   AGGGGCGAGGGGACT                GTCCG GTG CGGTC                TTTTCGCTCTCTCAC  64 69
APT61_RS21945 4741541 .. 4741561 +  -2.6  -4.68424   GCGGACAGTAAGCTC            CAGAATGA CGTTA TCGTTTTG            TTTTTGCATGGCTTA  66 285
APT61_RS21975 4746427 .. 4746448 + -17.3  -3.72576   TCAAGCCGCACCAAA           GAGGGGCGG GAAA CCGCCCCTC            TTTAATAACGAGGGA 100 48
APT61_RS21980 4746975 .. 4746992 +  -7.7  -4.22676   CCAGGCCCGATCCCG             TGGCAAC TTTA GTTGCCG              TTGTTGTTTATTAAT  75 85
        emrD 4748343 .. 4748357 +  -2.8  -4.63486   AGCGGATCTTGCCCC               CAGG CCAGTTT CCTG               TTTTCTTAAGGGAAT  65 40
APT61_RS21990 4749809 .. 4749819 +  -2.4   -3.3692   AACGCCTGATACCCT                 GCGC AGA GGGC                 GTTTTTGCCCTCAAC  46 146
APT61_RS22025 4754465 .. 4754488 +    -6  -3.05384   GGTTTCTGTCACCCA          GAGCT-GACGG AAG CCGTCGATCTC          TTCCATCCAGGCAAG  53 50
APT61_RS22060 4763131 .. 4763159 +  -2.3  -4.98616   AATCATCCAGCGACT        CGTCCTGATGGAA GAT TTTCACCAGTTCG        TTTTTGCTGTTTTCA  74 106
        rnpA 4771406 .. 4771418 +  -4.8  -3.14848   GGTGGAGACGATCCC                GTCC CTCCA GGAC                CTTTTGATACCAGAG  50 211
APT61_RS22095 4773141 .. 4773158 + -12.7   -5.5074   GAGCAGTGATGACAG             GGCGGTC TATT GACCGCC              TTTTTTATTGCATTA 100 82
        trmE 4774578 .. 4774604 +  -6.7   -5.8096   GCCAGCTGTTAAAAA        GCCGC-ATAACA CTCC TGTTATTGTGGC         TTTTTCTTTTTTATA 100 51
        tnaA 4776591 .. 4776603 +  -3.3  -2.87963   TAGAAACTAAACACT                CCTCG GTA TGGGG                TGTCATGGTTATAGC  43 148
APT61_RS22110 4777847 .. 4777871 + -15.9  -3.87815   CGCGGTCTATTCTGA          GGTGATTTCCT GTA AGGAAATCACC          TTTGTCCAAATGGCA 100 59
APT61_RS22115 NONE
APT61_RS22120 NONE
APT61_RS22125 NONE
APT61_RS22130 4781597 .. 4781628 + -11.8  -4.64676   GAGAGGATGCAAACA      CTAAAAACAGCAAC CTAA GTTGCTGTTTTTAA       TTTTATTACGCATCA 100 97
APT61_RS22140 4783812 .. 4783836 + -18.7  -4.93696   CGCTAAAACGAATAA          GCCGTAAAGCG AGT CGCTTTACGGC          TTTTTGCTATTTAAA 100 35
APT61_RS22190 4797942 .. 4797964 + -13.4   -3.8901   AGAGCAATAAAAAAA           GCCAGCCTGG GAT CCAGACTGGC           TTTCGTACTTTCAAG  95 319
APT61_RS22225 NONE
APT61_RS22220 NONE
APT61_RS22215 NONE
APT61_RS22210 NONE
APT61_RS22205 NONE
APT61_RS22200 NONE
        atpC 4797942 .. 4797964 - -15.6  -5.85737   AGAGCAATAAAAAAA           GCCAGCCTGG GAT CCAGACTGGC           TTTCGTACTTTCAAG 100 47
        glmU 4793744 .. 4793789 -  -5.5  -2.95774   TATATTTATTAGATA CTGCCTTT-GGGCG-GGGGAT TATGTT ATCCCCTCGCCCCAAACACCG CACGATCCCCCCTCC  51 77
APT61_RS22180 4791778 .. 4791797 - -13.6   -5.0538   GGGCAGGTTAAAAAA            GCTCCACC CGAA GGTGGAGC             CTGAGGGAATTACTC 100 35
APT61_RS22175 4790347 .. 4790379 -  -8.4  -3.15249   GAGACGTTTTACGAA     TATGCCCGGT-GGCG CTAA CGCTTACCGGGCCTA      CAGGTGGAGCCGTAG  64 89
        pstC NONE
        pstA NONE
APT61_RS22160 4787647 .. 4787657 -  -2.4  -2.71731   CGCACTCCTGAATCA                 GCCG TAG CGTC                 CGGTGATGTAGTCTT  39 12
APT61_RS22155 4786872 .. 4786894 - -16.4  -3.45231   TTAGATATTTAAATA           TAACGCCAGC TTA GCTGGCGTTA           CGGGAGGCATTACTC 100 35
APT61_RS22150 NONE
APT61_RS22145 4783805 .. 4783842 - -15.1  -4.09685   CCTTATCCGCTAAAA   CGAATAAGCCGTAAAGCG AGT CGCTTTACGGCTTTTT-G   CTATTTAAACAGCTT 100 26
APT61_RS22135 4781604 .. 4781621 -  -9.9  -4.93696   TGCAAACACTAAAAA             CAGCAAC CTAA GTTGCTG              TTTTTAATTTTATTA 100 38
        dnaA NONE
APT61_RS22080 4767512 .. 4767542 -  -5.3  -2.87931   CGGACTGCGCACAGA       CCCTGAAGCGTAC ACGGA GTACGTGACAGGG       GCGAGCACAGCCCAG  49 78
        recF NONE
        gyrB 4763896 .. 4763924 - -17.5  -3.23899   TGTGAAGCAAGCTAA        TCCGCGCCTTCCC GTA AGGAAAGCGCGGA        GGCAGACTTAGATAT 100 33
APT61_RS22065 4763046 .. 4763094 -  -8.1  -2.57522   TCAACCCATATGAAG TCTGATGGT-TGCCGGGCCTGC CACCAT GCAGGCCCGGCGCAGAATCAGG TGGCAAAGAAAAAGT  58 21
APT61_RS22055 NONE
APT61_RS22050 NONE
APT61_RS22045 NONE
APT61_RS22040 4756718 .. 4756738 - -13.3  -3.14931   TTTAGGCGGCAGCAA            TCCGGCAGC TTG GCTACCGGA            TTGCTACGTCTGTCT  88 41
APT61_RS22035 NONE
APT61_RS22030 4754065 .. 4754076 -  -7.2  -3.85817   ATGGCCCGTTATAAA                CCCG GTTG CGGG                 TCTGTATTGGGCCAT  69 390
APT61_RS22020 4753255 .. 4753267 -  -3.4  -3.84825   GTTACGCATACTAAA                TCTC CTTCT GAGA                AGCGAGTTCGGCACA  55 144
APT61_RS22015 4752726 .. 4752745 - -11.4  -4.67038   GCGCTAAAAGTAAAA            CGGCCACC CGAA GGTGACCG             TTTGAGTTTTTACCC 100 100
APT61_RS22010 NONE
APT61_RS22005 NONE
APT61_RS22000 NONE
APT61_RS21995 4749486 .. 4749500 -  -8.6  -2.78384   CCCTCTCCGATCAGA               GCATGT ACG ACATGC               TGGGCTGGCTGGCGC  58 210
APT61_RS21970 NONE
APT61_RS21965 NONE
APT61_RS21960 4743986 .. 4744004 -  -7.4  -5.17786   TAACAAAAGCAAAAA             CCACCG CTTATTT CGGTGG             TTTTATAAGCATTGC  88 123
APT61_RS21955 NONE
APT61_RS21950 4741259 .. 4741276 -  -9.8  -3.52073   TTGTGAAGATCATAA             CCCCGG ACGCTG CCGGGG              ACTGATTTACTCGAA  74 32
APT61_RS21940 NONE
APT61_RS21935 NONE
APT61_RS21930 4736849 .. 4736865 - -10.8  -4.56597   TTCCCTGGTGAAAAA              CCCGGC GCGAG GCCGGG              CGGGGTTCGACTCTT 100 39
APT61_RS21925 4735662 .. 4735699 -  -9.9  -4.25104   TCGGGGCCATGAAAA   CAGATATCCGCCCGG CAAAGCAT CCAGGCGAATATCAG    CGTGCAATGAAAGTC  83 44
APT61_RS21920 4735047 .. 4735072 -  -4.7  -2.87132   CGGGCGGCGCATACA         CCGGG-CTAC AGGTCAG GCAGGCCCGG         TAAGCGTCGCGCCAC  47 55
        nepI 4733358 .. 4733380 -  -3.3  -3.60098   AGCCTGTATCTGAAA           GGCGCGC AGATGATTG GCGGGCC           GAAGGCGAGCATTCT  49 387
APT61_RS21880 4726320 .. 4726335 -  -8.2  -3.19463   CTGATTACGCATTAA              GGGGCC ATGC AGCCCC               CTTAATTTTTTACCG  64 35
APT61_RS21870 4724786 .. 4724802 -  -9.3  -2.61695   GCCATTGCCAAAGAG              GCGGGCG TGA CGCCGGC              GATGCTGCACTACTA  60 494
APT61_RS21860 4722918 .. 4722946 -  -2.3  -3.29263   ATATCCTTTTGATAA        CTGTTTTCCCGAC TAT ATCGGCAACGCAG        CGGCAGGCTAAAAAA  45 116
APT61_RS21855 4722070 .. 4722087 - -12.7  -3.74251   GATAGCTGGAGTAAA             TGCGGGG CGCG CCCCGCA              TGCCTGCTATTCCCA  90 32
APT61_RS21830 NONE
APT61_RS21825 4716742 .. 4716767 -  -6.1  -3.81259   AGATAATCCAGGAAA         CGCGCCA-GCAA ATT CTGCGCGACGCG         TTGAAAAGGTCGTAG  64 74
APT61_RS21815 4715603 .. 4715632 -  -4.2  -3.95378   TCAGATTTCAAACAA       CGCCCGGTAGTG TTCTAG CACTAAAGGACG        TCTAACCTCACCAAC  57 484
APT61_RS21805 4715127 .. 4715173 -  -9.6  -3.89957   GTGAATAATGAATAA TTCTGATGTTTATACTGGTGCA TTT CGCACCAGTATAAACTTATAAA TATGCATAATTTTTT  79 208
APT61_RS21780 NONE
APT61_RS21775 4706750 .. 4706780 -  -4.7  -3.92577   TAATGTGCAAAAAGA       CACGCCGTTGA AGCCGACAG TCAACGGCAGG       CTGAATGCGGTGAAT  59 220
APT61_RS21760 4701774 .. 4701797 - -12.4   -3.9122   CAGGCCTTCAAACAA          GGCGATCTGC ATCT GCTGATCGCC           ACTACGGTGATTGAA  83 461
        ligB 4694146 .. 4694162 -  -2.9  -3.95986   CGTAATCCAAGTAAA              GAGGCTT ACG AAGTCCC              GCAGTTCATCTGGTA  58 314
         rph 4690128 .. 4690145 - -11.3  -5.96219   TACGGACAAAAAAAA             GGCGACT CATC AGTCGCC              TTTAAAATCAATTTT 100 33
        pyrE 4689050 .. 4689071 -  -4.3  -4.81083   CTGAAGGATGAAAAA           GACACCACC GCAC GGCTGCGTC            TGATTGTTCAGCTGA  75 405
APT61_RS21685 4686173 .. 4686186 -  -6.7   -4.2074   TCCCGAACAGACAAA               GATCC CGAT GGATC                GCGAGAAATGGCTTA  71 38
        rpmB NONE
        rpmG 4685516 .. 4685531 - -11.8   -5.1925   GCAGAATGCAAAAAA              CCCCGC AGGT GCGGGG               TTTTTCAGTACAAGG 100 50
APT61_RS21670 4684273 .. 4684285 -  -2.6  -4.72986   CAGCCCCAGCAAAAA                GCCG CTGTT CGAC                CTTGACGAGCGGGTG  70 414
APT61_RS21630 4675457 .. 4675489 -  -6.9  -4.14243   GAGCGGATGGCAAAA     GAGCTGCAGG-CGC TCTATC GCGACCTGCTGCGC      TGAGCCGCAGTGGCA  71 7
APT61_RS21600 NONE
         tdh 4667716 .. 4667729 -  -9.5  -5.63103   GGCCAACGAAAAAAA               GCGCC CGCA GGCGC                TTTTCGTTTAATCCC 100 33
APT61_RS21590 4666303 .. 4666334 - -10.8  -3.04792   TGACCATCGGCAACA      GCCAG-GCGATGCGC GCC GCGCAGGGCACTGGC      GTGAAGGTGATTAAG  66 489
APT61_RS21570 4662321 .. 4662331 -  -2.4  -3.22298   TTTACTTACCACGAA                 CCAG AGG CAGG                 TTTTCACCGCTCCAG  43 1
APT61_RS21565 NONE
APT61_RS21560 4661537 .. 4661557 -  -3.9  -2.64933   GACGCATTGACAGTA            CTCATCAGG CAT CCTGATGTT            GTTCAGTACCTTCGC  44 9
APT61_RS21555 4660467 .. 4660496 -  -4.3  -3.53366   CAGACGTAATGATAA       TGAC-CGGCCAG TTCTTCG CCAGCCGGGTCA       TTCAGGTGATAATGC  52 51
        cysE 4659333 .. 4659343 -  -6.8  -4.36595   TATGCAAACGGAAAA                 TCCG GAG CGGA                 TCTTTGCCCTCACCA  74 306
APT61_RS21505 NONE
APT61_RS21500 4648749 .. 4648776 -  -6.2  -5.65927   CAGGCAAAGAAAAAA        GGCAGGCTCTGCG TAT CCCAT-GCCTGCC        TTTAAGGGATTAATG 100 35
APT61_RS21495 NONE
APT61_RS21490 NONE
APT61_RS21485 4644599 .. 4644618 -  -5.1   -4.4891   GCGAGCAGGAGAAAA            TTTATCG GCTACT CGATAAA             CACCTGCAAACCTTT  70 151
APT61_RS21475 4642119 .. 4642148 - -12.9  -2.54325   GCTGCGTAAACAGAT       TGAGCAGACC-CCC CGG GGGCGGTCTGCTCT       TAAAGGTTAGAACAG  81 32
APT61_RS21465 4640249 .. 4640271 -  -6.9   -2.8805   ACGACGCTGCACATA           CCTAGCCCG GGAAA CGGGTCAGG           TATGGGTAGCGCCAC  54 90
APT61_RS21450 4635715 .. 4635727 -  -3.3  -3.39216   TCCTGACTCAAAAAG                TCAGG TTG CCAGA                GTGCCCGGGACCAGC  48 112
APT61_RS21445 4635204 .. 4635232 -  -7.4  -4.25104   TGCCTGGCAGGAAAA        CGGTCTCTGACG GTTTA CGCCAGAAAGCG        CAGCCGTTCGGCGCG  73 11
APT61_RS21430 4630532 .. 4630551 -  -7.8  -5.63517   GGTTTAAATAAAAAA            GGCCTTCC GTAA GGAAGGCT             TTTTTTTACTATTAC 100 37
APT61_RS21405 4623805 .. 4623843 -  -8.1  -4.56597   TGGGTTCCTTAAAAA  GTGTA-GGCCGGGCAAGCG TAG CGC-CGCCCGGCGATACCC  ATTACTTATCGAACA  81 27
APT61_RS21400 NONE
APT61_RS21390 4620736 .. 4620764 -  -5.9  -3.06509   TGGGAAATAAGCATA        GCTGACAACGC ACTCAAG GCGCAGCCAGC        TCATCACGCGGCGGT  53 42
APT61_RS21385 NONE
        glyS 4617563 .. 4617576 -  -9.5  -5.60993   TGCGGTATAAAAAAA               CCCGC CGAA GCGGG                TTTTTAGCACTCACA 100 80
APT61_RS21375 4615489 .. 4615512 -  -7.4  -4.32857   GTTTTTAAAGATAAA          CCGCAAACGG TAAC CCGTTCGCAA           AAGTCTAATCCCTTT  74 268
APT61_RS21365 4614263 .. 4614278 - -10.4  -5.32882   TACCATTATAAAAAA              CCCGCT TTGC AGCGGG               GTTTTTAATCTGCCA 100 127
APT61_RS21360 4613785 .. 4613799 - -12.8  -5.63103   CCTGAACGAAAAAAA               CCCGCC AGA GGCGGG               TTTTTAAATTCTTTT 100 56
APT61_RS21325 4604667 .. 4604677 -  -2.4  -3.84406   GGTTTACCAGAAGAA                 CAGC CGG GCGG                 TGAATTTCTACCATG  53 101
APT61_RS21310 4602766 .. 4602781 -  -6.8  -4.52781   CAACGATAACCAAAA              CCCTAC ATGA GCAGGG               GTAAAACGGCATGAA  77 147
APT61_RS21305 4601472 .. 4601488 - -13.7  -5.72622   TGCAGAAACAAAAAA              GGCCGGA ATA TCCGGCC              CTTAGGGTGAGGTTT 100 43
APT61_RS21300 4599442 .. 4599467 -  -4.7  -3.14344   CAGTTGCGCTACCAA         GCTGCGCTACTC GCC GAAT-GCGGAGC         GCATCTTACTGCTAC  50 107
APT61_RS21295 4599351 .. 4599370 -   -15   -5.1287   TTCAGATGCAAAAAA            CCCCGCTC AAAT GAGCGGGG             TTTTCGAATGTGGTC 100 36
APT61_RS21290 4599185 .. 4599203 -   -16   -5.1287   TTCAGATGCAAAAAA             CCCCGCTC AAA GAGCGGGG             TTTTCGAATGTGGTC 100 36
APT61_RS21285 4598600 .. 4598616 -  -3.7   -4.2361   AACAGAATGTGAAAA              CGTCA ATACAGG TGACG              GGGATTTACGCTAAG  60 457
APT61_RS21280 4596700 .. 4596722 -  -9.8  -2.93047   CTCACAAATGTAAAT           TCCCTCTCCG TGA CGGAGAGGAT           TAGGGTGAGGGGGTG  69 98
APT61_RS21275 NONE
APT61_RS21270 NONE
        dppD NONE
        dppF 4592663 .. 4592692 - -13.7  -4.07568   GCCCGGGCCTGAAAA       CAAAAAACCGGCG AATT CGCCGGTTTTTTT        ATGACTTATACCTGA 100 31
APT61_RS21250 NONE
APT61_RS21245 4591089 .. 4591100 -  -4.4   -5.7946   TCTGTAACAAAAAAA                GAGA TTTC TCTC                 TTTTTAAGTTCGAGC  95 89
APT61_RS21240 NONE
APT61_RS21235 4590820 .. 4590836 -  -5.8   -3.3071   ATATCACCACATCAA              CCAGGC GAAAT GCCTGA              ACTGTTGAATTCATT  57 79
         tuf 4589535 .. 4589552 - -11.3  -4.60924   GAAAGCGTGCAAAAA             GGGCATC AAAT GATGCCC              TTTTCATGCGCATTG 100 60
        secE NONE
        nusG 4588359 .. 4588387 - -15.4  -5.35224   CCCATAAAAACAAAA        GGCGCGAAATTG TATTC CAATCTCGCGCC        CTGTGCAACGATTAA 100 64
APT61_RS21215 NONE
APT61_RS21210 4587088 .. 4587124 -  -6.6  -3.72695   ACTTTCGTTAGCAAA   CGTGGG-GGTAAGATTG TAGA CAAAATCACCGCCCACG    TAAAGGCATTAGTTT  63 34
        rplJ 4586334 .. 4586356 -  -2.7  -3.92602   CGAATACTTGATAAA          GATGACTGCT ATTA AGCAG-CTTC           TTTCGCATCGCGAAC  54 14
        rplL 4585848 .. 4585873 - -17.7  -4.64766   CTTACAGCGCAAAAA         GGCTGGTGACT AAAA AGTCACCAGCC          ATCAGCCTAATTTCT 100 65
        rpoB 4581519 .. 4581546 - -17.8  -2.65298   CGGAGTTAGCACAAT        CTGGTGCCGGAA ATTA CTCCGGCACCAG         TGACCTGTTTGAGCG 100 45
APT61_RS21190 4577228 .. 4577241 -  -9.5  -6.11644   TCAGGCAAAAAAAAA               CCCGC CGAA GCGGG                TTTTTTTATGGGCTG 100 50
        nudC NONE
        hemE 4568098 .. 4568110 -  -3.3  -2.86426   CAAGATCCATAACGA                CTCCT TAC AGGTG                ATACTGGGCAGAAAG  43 17
APT61_RS21130 4567387 .. 4567399 -  -4.1  -2.56432   TGTAACATGATGAAG                TCTCG AAT CGAAA                ATTAGCCGCAGTTTA  44 47
APT61_RS21125 NONE
APT61_RS21120 NONE
APT61_RS21115 4565217 .. 4565227 -  -2.4  -4.77567   AGCTGGACAAGAAAA                 CCTC CGA GTGG                 GACGAGCGTGCTTCG  70 424
APT61_RS21100 4560453 .. 4560469 -  -6.5  -2.55847   AACCGCTAGACGAAG              GGGACAC GAT GTGTCAC              GACTTCGCAGCCGTC  52 91
APT61_RS21095 4560300 .. 4560347 -    -8  -4.00532   TTTTTAAAGAGCAAA TATCTCAAACATGACTCACTAT TTTC ATAGTTAATCAGCTTTGAGATA CTGATTGGTTGTGCC  73 61
APT61_RS21090 4557226 .. 4557246 -  -2.5  -4.13767   TGGTTCAGCTGAAAA            TTGTCTCAG TCG CCGAAACAG            CTTCGGCGTTGTAAG  55 21
         rrf 4557017 .. 4557038 - -15.9  -5.34555   GCAGACGACAAAAAA           CCCCGTACC TTGC GGTACGGGG            TTTCCGATTTGATGC 100 39
APT61_RS21080 4555778 .. 4555793 - -10.4  -5.63517   TTCGGAAATAAAAAA              GGCACC CGAA GGTGCC               TTAACTGGTGAGCTG 100 71
APT61_RS21075 4553970 .. 4553981 -  -7.2  -2.90813   TATGTGGTGAAATCA                CGCC AGCA GGCG                 GTAGCCAGGCAGCGT  57 11
APT61_RS21070 4552545 .. 4552555 -  -2.4  -3.39327   TCGCCACAGGGAGAA                 GGCG TAA CGCT                 GTATTGTGCCAACCG  45 100
        aceK 4550384 .. 4550397 -  -3.1  -4.15833   ATGAGCACGTTAAAA               TCCTA CTGG CAGGA                TAAATATCCGCAGGC  60 377
        metH 4545618 .. 4545648 -   -14  -3.95219   CTTAAATGTCAGAAA       GAGACAGGGCACCC TGT GGGTGCCCTGTTTG       TTGTAAGGAAACGTG 100 44
APT61_RS21045 4543661 .. 4543680 -    -5   -3.4072   GAGTTGGCAGCATAA            TTTCTCCT GTAG AGGCGAAA             TATACCTTAGGTTTG  52 150
APT61_RS21040 4542485 .. 4542502 -  -5.5   -3.1247   ATGCTTTACACTGAA             GCCTCGT CCAC AGGAGGC              TTCAGGTATGTCCAC  52 306
APT61_RS21020 NONE
APT61_RS21015 4537584 .. 4537601 - -14.1  -2.55437   GAGTAAGATGAACAT             GGCCCGG ATAA CCGGGCC              TTTTTTTATCCTGCC  87 31
         pgi 4534130 .. 4534149 - -16.4  -3.35679   CGCGGGGATTGACAA            GGGGGGCC CGGC GGCCCCCC             TTGTCACGTTCACGG 100 147
APT61_RS21000 4532998 .. 4533024 -  -5.2  -3.05844   TGCGTGATGTGAACA        GCTACA-CCCT GGCGGT AGGGATGCAGC         AATACCTCAACCCAC  49 260
APT61_RS20980 NONE
        lamB 4526369 .. 4526386 - -12.7   -3.1478   AGCACCCTATGAAGA             GAGGGGC TTTC GCCCCTC              TTTTAGGTCAATACA  84 55
APT61_RS20970 4525287 .. 4525306 -   -15  -5.44119   GTCAGCGCAAAAAAA            GTGCGCCC GCAA GGGCGCAC             CAAACTACTGACAAA 100 62
        ubiC 4524672 .. 4524684 -  -4.7  -2.78384   CTTCCTCTTAGTACA                GCGGC GAC GCCGG                TAAAAACAGCTCGGT  47 5
        ubiA 4523496 .. 4523508 -  -4.1  -4.47328   AAGCTGAGGACAAAA                TTGCC GGG AGCAA                TTTTGAACAGCGCCT  65 299
APT61_RS20950 4519956 .. 4519971 -    -4  -2.84839   TATATACAGCTAAAG              GTGATT TTGG AACCAC               AAACCGCATAAAAAA  45 68
APT61_RS20945 4519260 .. 4519284 - -16.5  -5.12068   CAGAGGCAAGAAAAA          CAGACTGCGAC ACT GCCGCAGTCTG          TCAGAAAAGCATTAT 100 37
APT61_RS20940 4517853 .. 4517868 -  -2.6  -3.07242   GATAATAATTATAGA              TAA-GCC TGC GGCGTTA              GGTTTGTTATTCGGA  43 70
APT61_RS20935 4517504 .. 4517526 - -13.4  -5.58454   CTGAGAGCAAAAAAA           GGGGCGACCT GTA AGGTCGCCCT           GGGCGTACATCCGTG 100 61
APT61_RS20925 4516243 .. 4516268 -  -6.8  -4.15044   TTGTGGGTGAATAAA         CCCCG-GCAGC TAAAT GCCGCGCAGGG         GCATACGTCCTTTGT  71 133
APT61_RS20920 4514871 .. 4514885 -  -4.2  -2.98719   CTACTATAGCACAGA               TTTGCC GGA GGCAGA               GCGCCTCCGGTTCCT  47 42
APT61_RS20915 4513773 .. 4513796 - -15.3  -5.69793   ATAGTAAATAAAAAA          CGCCCGGCA ATGCGG TGCCGGGCG           TGGTGAATTTGACCA 100 55
        pspG 4513272 .. 4513291 - -13.6  -2.59135   GGTCAGAAAGAAATT            GGGCTTCC CGGA GGAAGCCC             TTTCTTTTTTTAGTT  84 174
APT61_RS20900 4510531 .. 4510572 - -15.9  -3.33492   CGAGTCACGTGACAA GCCCGTTCACCCCGG GAACTTAGTAAG CCGGGGTGAGCGGGC  GCAGTCAACGCCCCT 100 64
         alr 4509209 .. 4509227 -  -5.2  -3.66556   AAGTGCTGAACATAA             GGTGAACG GAA CAATCACC             TCAGTCGCATGCTCC  59 124
APT61_RS20890 NONE
        aphA 4506591 .. 4506601 -  -8.2  -4.37711   CGACGAAAGGTAAAA                 CCCG TTG CGGG                 TAAATCTGCTTAAAA  80 65
APT61_RS20880 NONE
APT61_RS20875 4505674 .. 4505702 -  -3.8  -3.53012   GCGGCGGCGGCGAAA       TCCTGGTTTCCGG CACC CCGGAAACC-GTC        GCGGAATGCGAAGCC  51 80
APT61_RS20865 4502099 .. 4502116 - -11.3  -5.64421   ACTGTAAATAAAAAA             CCCAGAC CGAG GTCTGGG              TTTTTTGTTGTTGCG 100 59
APT61_RS20855 4499843 .. 4499857 -  -6.4  -3.04988   TGATTTATAAATAAT               CAACCG CGA CGATTG               TTTTTCCTCTTCCCG  55 0
APT61_RS20850 4497674 .. 4497686 -  -3.3  -3.33744   GTGGTGGCTAAAAAG                TCGGG TTA CTCGA                AGTGGTACTTACAGA  47 246
APT61_RS20840 4496986 .. 4497010 - -14.4   -4.4572   AAGACCGGAAATAAA          CTAAAGCGCC CGTGT GGCGCTTTAG          TTTTTTATACGTCGG 100 42
APT61_RS20835 NONE
APT61_RS20830 4494382 .. 4494401 - -12.8  -5.45802   TTCCGAAAATAAAAA            CGGGCGGC CTTA GCCACCCG             TCTGTTTGCGCAGTT 100 47
APT61_RS20825 4492539 .. 4492558 - -12.2  -4.35524   GGGGTAAACGCAAAA            CGGTAACC GCCA GGTTACCG             TTTTTAGTGTTTGCA  95 92
APT61_RS20815 NONE
APT61_RS20810 4490415 .. 4490444 - -10.5  -3.31461   TACCGACCTGGAGAA       CCGCAGGCCCGGC AAGC GCCGTGCCGCCGG        GCAAGACTCAGAACA  75 33
APT61_RS20795 4485955 .. 4485973 -  -2.3  -4.78752   ACCAGAACGGAAAAA             GCCGATG TGCAT CACAGGC             TTTATCTGCAATTCG  67 136
APT61_RS20775 4479646 .. 4479656 -  -8.2  -3.01712   GGTTGCTGGTCAATA                 CCCG TGC CGGG                 CAAACCGACTACCCG  56 449
APT61_RS20755 4475809 .. 4475827 -  -8.8  -2.87132   TGTCGCTGGCAGAGA             GCATCCGC ATG GCGCATGC             CTGCGCCCGGGCCAG  59 119
APT61_RS20720 4466794 .. 4466819 -  -5.5  -3.87869   GTAACGTTTCATAAA         GCCAGTCTCA CAGCGGT TGAG-CTGGC         TTTACGGTAATGAAC  61 69
APT61_RS20715 4466098 .. 4466113 -  -2.5  -3.24017   AAGTGCAGAACCTAA              GGTGA ACGGAA CCACC               ACCTGAGCCGCATGT  43 382
APT61_RS20630 NONE
APT61_RS20625 4449297 .. 4449309 -  -4.1  -4.47328   AAGCTGAGGACAAAA                TTGCC GCG AGCAA                TTTTGAACAGCGCCT  65 271
APT61_RS20615 4445904 .. 4445919 - -11.8  -6.15828   GGTATGAAAAAAAAA              CCCGGC GAGC GCCGGG               TTTTTTATTTACTCA 100 34
APT61_RS20610 NONE
APT61_RS20605 NONE
APT61_RS20600 NONE
APT61_RS20595 4440238 .. 4440254 -  -2.1  -3.72576   GCGCTCCTGAGTAAA              CTCATGC CCG GCCTGTG              TTATTCATCAGTTCA  50 10
APT61_RS20590 NONE
APT61_RS20585 4437666 .. 4437682 -  -2.1  -4.29106   TTGTACATCAATAAA              GCCCCGT ATA ACGGCGT              ACGGTCCGGCGAATA  57 1
APT61_RS20580 NONE
APT61_RS20575 NONE
APT61_RS20570 NONE
APT61_RS20565 4433901 .. 4433923 - -11.2  -3.76393   ACAGGGCAAGGCAAA           CAGGTGCCCG CAT CCGGCACCCG           TTAGCTACTGGTATT  81 30
APT61_RS20550 4429932 .. 4429950 -  -8.8  -2.81464   TTATTACTGAGCACA             GCCCCC CTTCTGC GGGGGC             TTTTTATCAGAACCG  62 88
APT61_RS20535 NONE
APT61_RS20530 4426540 .. 4426550 -  -4.6  -4.77036   GCCGACCAGCAAAAA                 CGCG CCT CGCA                 TGACTTTACGCATGA  76 221
        fxsA NONE
       groES NONE
       groEL 4416696 .. 4416732 -   -19  -4.37971   AAAAGATGACCAAAA   GAA-AAACCCCCGGTCA TTTC TGACCGGGGGTTTCTTC    ATTTCTGCGAGGTAT 100 159
APT61_RS20480 4416228 .. 4416265 -  -6.2  -4.36774   AAGCAAGAAGAGAAA   GTTGAGCCTCTTTCCG ATCGCG CAGAGAGAGGCACAGC    ATATCAATTCGGACA  72 29
APT61_RS20470 4414538 .. 4414558 - -10.4  -4.56597   TTTTTCGGTCAAAAA            GGCGCAGC AAAAA ACTGCGCC            TTTCATCCCGAAGTG 100 43
APT61_RS20465 4414323 .. 4414336 -  -5.9  -2.99717   AGCTACATAAGCATA               GCCAG GATC CCGGC                GAGTGATGGAAAAGG  53 67
APT61_RS20460 4414085 .. 4414123 -  -6.7  -3.57263   ACCCTGAGGGGGAAA  CTGAG-GGTACGGCGACG TATT CAGCACCGTACCGCCCAA   GATTACTGTTGTGCT  61 28
APT61_RS20450 4412641 .. 4412662 -  -2.9  -3.37655   TGTGGCAAAAAATGA           CGGGGAAAG CCTA CTTTACCGG            CGCGTCTGACACCGC  47 263
APT61_RS20420 4407595 .. 4407610 -  -6.8  -3.79533   CAAATTAGGAAAATA              GCCTGCG TTA CGC-GGC              ACTGGAAGTTATTGA  66 120
APT61_RS20415 4405955 .. 4405996 - -10.9  -3.24289   ATCGCAAAGATGCAA TACCCCCCTACTCCCCGCA CACT TTCAGGCAGTAGGGGAATA  GCGAACTCAGTCAGC  76 32
APT61_RS20410 4405365 .. 4405396 - -11.6  -4.59853   GGAAGTTTGTAAAAA      TAAAAGCCAGCCGC ATCA GTGGCTGGCTTTTT       TGCCTGCGATTTTAC 100 37
APT61_RS20390 4399109 .. 4399119 -    -4  -2.66435   AGGCGCATTATACGA                 GAAA TCC TTTC                 TGCTGCAACCCCCCC  44 155
APT61_RS20385 NONE
APT61_RS20380 NONE
APT61_RS20375 4398289 .. 4398299 -  -6.8  -3.72576   CGGTTGCGCAGCAAA                 TCGC CAG GCGA                 AACGCCTGTGCCGTA  63 380
APT61_RS20365 NONE
APT61_RS20360 NONE
APT61_RS20355 NONE
APT61_RS20350 NONE
        miaA NONE
         hfq 4390668 .. 4390696 -  -7.4  -3.01831   TCTCTAAAAAGATCA       GCGGGGAACGCAG AAAC CTG-GCTCCCCGA        TATGGAAATAACAGC  59 49
APT61_RS20335 4389288 .. 4389300 -  -3.3  -3.60234   TGATATACCTTCAAA                GGCCT GGT ATGCC                GGAGCATCCATGGCG  50 88
APT61_RS20330 NONE
APT61_RS20325 4386942 .. 4386962 - -13.3  -5.64274   GTACGGATAAAAAAA            TGGCGCCTC AAA GAGACGCCA            TTTTCGTATTCAGAC 100 49
APT61_RS20320 4385343 .. 4385366 -  -4.5   -5.4182   AAGGAGAAAGAAAAA          GCCGG-ATGC GCATG GCTTTCCGGC          CTACATTGCGTTTTG  85 80
APT61_RS20315 NONE
APT61_RS20310 4382275 .. 4382306 - -15.2  -4.59773   CCTTACGGCTAAAAA      GCGTCACCCCTTCC GGCT GGAAGGGGTGACAG       GGAGGTATTACTCAG 100 33
APT61_RS20305 4381267 .. 4381291 - -15.9  -4.33785   AGAGGGAGAAAACAA          TAAAGGCCTTC TTT GAAGGCCTTTA          GTTTATTTCCCGCGC 100 28
APT61_RS20295 4378007 .. 4378025 -   -16  -3.10344   CGCGCAGCGAACAGA             CCGCGCAG GTC CTGCGCGG             GAAAGGCTCGCACCT  88 75
APT61_RS20275 4374307 .. 4374325 -  -9.6  -3.32844   GTGCTGACCCCACAA             TCCTCCAG AAA CTGGAAGA             TCAGGGGGTGAAGAT  67 50
APT61_RS20260 NONE
APT61_RS20255 NONE
APT61_RS20250 NONE
        ulaD NONE
APT61_RS20240 NONE
        araD 4367639 .. 4367655 - -10.8  -2.74563   GTCATAGTCGAATTA              GCCCCC TGCCC GGGGGC              TTTTTTTATTTCTGC  72 31
        rpsF NONE
APT61_RS20220 NONE
        rpsR 4366001 .. 4366011 -  -4.6  -2.50307   TAAAGTCGTATTAAT                 GGAC CGT GCCC                 GATTACTGATGACGA  46 28
        rplI 4365478 .. 4365496 - -13.1  -4.80167   CATTAAAAAGCAAAA             CGCCGGC ACAAG GCCGGCG             CTTCGAACGTGATGA 100 52
APT61_RS20205 4363938 .. 4363950 -  -6.2  -3.32521   ACGACAGCGCGACAA                CGCC TGTCC GGCG                GGATGCCGAACTGGA  54 503
APT61_RS20195 4362880 .. 4362905 - -15.5  -3.27525   GGTTTTTAAACTGAA         TTCCCCTCCCC GACT GGGGAGAGGAA          AGAGAGCGGAATTAC 100 37
APT61_RS20190 4361175 .. 4361192 - -11.3  -6.08563   AACAGATAAAAAAAA             CGGCAAC CGAA GTTGCCG              TTTTGCTTTTACCTT 100 34
APT61_RS20180 4358445 .. 4358464 - -13.6  -4.42081   AAGATAAACGTAAAA            CGGCAACC CAGG GGTTGCCG             TTTTTAATCTGTGCT 100 122
APT61_RS20170 4356908 .. 4356948 -    -9  -4.36914   GTCGGGCCGACAAAA CCCGCAGGCCGGGTAA-GGC GTA GCCACCACCCGGCAT-CAGG CCGCATGTTCATCCC  83 21
APT61_RS20145 4353156 .. 4353178 -  -2.6  -3.40639   AAGCGGATTAAGTAA           TCTGTCCACG TCA CGTTAACGGA           CGCCCGTGTACTCTG  47 136
APT61_RS20125 4349939 .. 4349962 -  -7.4  -3.80733   GGCAGCGGACAACAA          CTGGCG-TCTG GCA CCGATCGCCAG          CAAGGTGAAGCTGGA  66 342
APT61_RS20115 4346912 .. 4346942 -  -3.2  -5.30339   AGCAAAAGAGAAAAA       CGCAACCTTAATTG AAG CGATCAAGGCGGCA       AATTTACCAAGAGAT  81 316
APT61_RS20105 4346096 .. 4346113 - -12.7  -3.50737   AGCCAGAAACATCAA             CGGCTCC CTGG GGAGCCG              TTTTTTTTACTGCGA  89 65
APT61_RS20090 4341637 .. 4341647 -  -4.6  -2.62316   TAAACTCATAATTCA                 GGCC CCA GACC                 GATGTAAAACTGTAA  46 5
APT61_RS20085 NONE
APT61_RS20080 4337477 .. 4337500 - -16.8  -5.55769   GGGCATAACAAAAAA          CAACGCCACC CGAG GGTGGCGTTG           TTCATCTCAGTACTG 100 32
APT61_RS20065 NONE
APT61_RS20060 4331960 .. 4331971 -  -5.8  -3.07816   GTTTGAGTCAGCGAA                CGTG GCAT CACG                 ATCTACTCCTTATGC  53 35
APT61_RS20055 NONE
APT61_RS20050 4329949 .. 4329970 -  -4.4  -3.07755   AGACATTGCGAAAAT           TCAGCAAG TTATCC CTTGCTGG            TCGTTGTGCTCACGC  47 12
APT61_RS20045 4328259 .. 4328284 - -14.1  -2.62616   CCATGGGTGAGAGCA         TTCCGGCGCCTG TTA CAG-CGCCGGAA         TGTGATGATGCTACG  78 36
APT61_RS20030 4324393 .. 4324406 -  -8.1  -3.35679   TCGTCTGATTGATAA               TGGCG ATGA CGCCA                TCGCAGAGGTACTGA  61 260
        pmbA 4322467 .. 4322479 -  -6.2  -3.64283   CAAAGGGGCGAATAA                CGCG GCAAG CGCG                TGAAGGCCCGGGAGC  61 108
APT61_RS20015 4321677 .. 4321692 -  -4.7  -3.90744   TGGGGCCCGAAACAA              CACGT CCTAAC ACGTG               AAGTTCGCTGCCTTA  59 299
APT61_RS20005 NONE
APT61_RS20000 NONE
APT61_RS19995 NONE
APT61_RS19990 NONE
APT61_RS19985 4318822 .. 4318841 - -16.4  -2.57132   GGTTCTCCTGATAAG            GCGGGCGC CTGA GCGCCCGC             GGGTATTAAAGGGCG 100 31
APT61_RS19980 NONE
APT61_RS19975 NONE
APT61_RS19970 4315781 .. 4315811 -   -11  -2.50935   AGGCGAGGGAGTAAT       CGTTCCCTCTCCCC TGT GGGGAGAGGGTTAG       GGTGAGGGGTAAGGT  72 46
APT61_RS19965 NONE
APT61_RS19960 4312273 .. 4312310 -  -6.9  -3.78736   GACACACGCATTAAA   CGCCAGGGGATCTCCCTC TCC GGCGGCGATCCCCTG-CA   TCCGCAAAACGTCCC  63 259
APT61_RS19930 4301521 .. 4301563 - -11.3  -3.53012   GGCCCTCTCCCCAAA GGGGCGAGGGGGAAAAGACCG CAC CGGGCTGT-C-CCCTCACCCC GGCTCTCTCCCCACA  79 262
APT61_RS19925 4298282 .. 4298295 -  -5.3  -4.24123   CGAAGAATGGCAAAA               CTTAC AAGT GTAAG                AAAGCGCCATACAGC  66 257
APT61_RS19895 4293844 .. 4293860 -  -3.5  -4.25104   TCCCGGCCAGGAAAA              TCGCCGC TTC GCGGTGC              ACTCAGCTTATTCCT  60 263
APT61_RS19890 NONE
APT61_RS19885 4290201 .. 4290230 - -16.5  -4.31835   AACGGGCACAACAAA       GCCGCCCACGGAA TATT TTCCGTAGGCGAC        AAGAGTGATAAATAT 100 43
APT61_RS19880 NONE
APT61_RS19875 4286815 .. 4286830 -  -4.6  -2.95007   TAGCGAAGAGAACGA              GCAGGG AGTG CGCTGC               GTCTCGGTGCCGGTG  46 189
APT61_RS19865 4285550 .. 4285573 - -13.9  -3.06991   TATTATTTTTAAAAT          GCAGGAGGG TTGCGG CCCTCCTGC           TATTCACTTTATCCC  90 69
APT61_RS19855 4283873 .. 4283888 -  -3.2  -3.08133   CACTGACTTATGTAA              GCGACC GGGG AGTCAC               GCCGTTGCCGCCTCG  45 73
APT61_RS19850 NONE
APT61_RS19845 4282189 .. 4282221 -  -2.6  -2.78463   ACGTTGTGGATTATA     CCTGTCGCACGC-CGC CAT GCAAGCG-GCGACGTG     CAGTTCCGCAGCTAA  42 73
APT61_RS19840 4282009 .. 4282019 -  -3.2  -3.40674   TCAGGACGTAAAAAT                 CGCT GCA AGCA                 TTGATTTTAAAGGGA  48 77
APT61_RS19835 NONE
APT61_RS19830 4279393 .. 4279404 -    -3  -2.78384   TTTTTTTCCATCATA                TATC ACTC GATA                 TAATTTCATATACAA  42 9
APT61_RS19825 4277428 .. 4277446 -  -3.8  -4.24338   AAAAATACCCGAAAA             TCCTGCTA TTT TTGCAGAA             ACAGCCATGCATGCA  62 251
APT61_RS19805 4273408 .. 4273418 -  -2.6  -3.91144   TGCATATTTTATAAA                 TATT TTG AATA                 GTTATATTACGCTCC  54 164
APT61_RS19785 4267834 .. 4267869 -   -17  -3.05935   ACAGGTGTTATTTAA    CGCAATACGGGCATGC GCCA ACATGCCCGTATTGCT     CATCACAATCACTAT 100 481
APT61_RS19750 NONE
APT61_RS19745 4258428 .. 4258438 -  -3.2   -5.3236   ACAATCGATAAAAAA                 CCAA TTA CTGG                 ATTTGGTTAGTGGTT  81 135
APT61_RS19730 4254959 .. 4254969 -  -5.4  -3.65046   TGCTTATTTGAATAA                 TGGA GAG TCCA                 GATCGTCCTCTGAAA  59 3
APT61_RS19725 4254503 .. 4254521 -  -2.2  -3.53012   CCCCGGCCTGTTAAA             CCGCAGGC CAT GCAAGCGA             AGCGCCGCCGGGCAA  47 47
APT61_RS19720 NONE
APT61_RS19715 4253195 .. 4253225 -  -5.4  -3.53012   CCGCCTTTGCCGAAA       CCGACTTCCGCC CGGATAT GGCGAAAGTTGA       TGTGCCGACGCTGGT  55 279
APT61_RS19690 4247695 .. 4247724 -   -15  -3.35197   CTCCAGAGAGATCAA       CGGCAGGCCGGA TGAGGG CCCAGCCTGCCG        CGACACACTTAGCGG  93 34
APT61_RS19685 NONE
APT61_RS19680 4247214 .. 4247233 -  -4.2  -3.21938   CGAAAACGTGATTAA            CCCTCGCGA CCG TCGCC-GGG            ACCGGGTGGAGGCGC  48 2
APT61_RS19675 NONE
APT61_RS19670 4240698 .. 4240719 -  -8.7  -2.75536   AAATCACGGTGAAAG           TCCATCGCC GCCG GGTGATGGA            TAAGATGCAGGCCCG  58 466
APT61_RS19650 4237053 .. 4237070 -  -5.5  -3.59262   GTCTATACGCGTAAA             GAGCACC CGTC GGTGTTC              TCGCCTGTGGCCAGT  55 232
APT61_RS19640 4235547 .. 4235558 -  -2.2  -4.42653   AGCCGAGCGAGAAAA                CGAT GACG ACCG                 CCTGCTTGATTACTG  64 123
APT61_RS19630 4234922 .. 4234940 -  -8.8  -3.68506   TAATACGTATTTAAA             CGCTGGCA TAA CACCAGCG             TTTAAATATTATTTT  71 57
APT61_RS19625 NONE
APT61_RS19620 4231578 .. 4231605 -  -9.8  -2.85763   AGAGGGAAAAACCCA        GGCCCGGTCAGCG TCG CGCC-ACCGGGCA        ATGTCAGCTTAAAAC  68 34
APT61_RS19600 4227018 .. 4227046 -  -4.5  -3.63805   ACGGCATACCGCAAA        CCCCGGACGAT CTGCTGC ATCACCAGGGG        ATCGGCATGCGGATG  56 339
APT61_RS19590 NONE
APT61_RS19585 NONE
APT61_RS19580 NONE
APT61_RS19575 4223335 .. 4223361 - -13.8  -4.66535   AACTTCTAAAACAAA         TAAGCCGCATAC GCT GTATGCGGCTTT         CTTTCTGGCAGGACG 100 117
APT61_RS19565 NONE
APT61_RS19560 4221866 .. 4221885 -  -7.1  -3.61764   GCAGGAATTGCGAAA            GCG-GGCC AGCGA GGCCTCGC            CTGTCTTACCTAACT  67 35
APT61_RS19555 NONE
APT61_RS19550 NONE
APT61_RS19545 4218716 .. 4218733 -  -4.7  -3.60431   AAAACGATCCGGAAA             CCGCGGC CAAA GCCGAGA              ACATCAAAGAATATC  53 462
APT61_RS19525 NONE
APT61_RS19520 4214509 .. 4214537 -  -5.1  -2.92656   AAAGTTAGGTATATA        GCGCACGCTACCC TGC GGATGGCGTGAGG        GCTTAGCGCCTTACA  51 51
APT61_RS19515 4212891 .. 4212905 -  -6.4  -3.18849   TTCATACTAGCAACA               GGCCAA TGG TTAGCC               AGAATGGCGGGATGG  57 181
APT61_RS19510 4209795 .. 4209808 -  -4.5  -4.58283   CAACTGGCTGAAAAA               CACCG ATGA CGGTA                CCCAGACCGGCGGCG  72 524
APT61_RS19360 4174341 .. 4174359 -  -3.1  -5.05782   ATTTACTTCAAAAAA             CGGATAC GCAAG GTATCAG             CAGTCCACAATTCTG  78 151
APT61_RS19300 NONE
APT61_RS19295 4160578 .. 4160604 - -11.5  -4.67353   TGATTGACTCAAAAA         CAGCGCCCGGA CTCAC CCCGGGCGCTT         TGTTCGTACGAAGCA 100 381
APT61_RS19250 NONE
APT61_RS19245 4151609 .. 4151623 -  -3.4  -4.07687   ACCTTTGGCGCAAAA               GCCCGG ATG CTGAGC               AGCGATGAGGTGGTG  58 280
APT61_RS19235 4149662 .. 4149692 - -18.4  -2.80244   TCTCCCAACAAATAC       TCAAAACGGCGACC TCT GGTCGCCGTTTTGC       TTTTACCTATGCCAC 100 32
APT61_RS19225 NONE
APT61_RS19200 NONE
        rimI NONE
APT61_RS19190 4145214 .. 4145232 -  -9.5  -4.84017   AATCTTCTATAAAAA             GCGCGGC AGCAG GCCACGC             ATCATGAATACGAAA 100 77
        prfC 4143569 .. 4143596 - -15.6  -3.08312   AAGGCAGGGATTTAA        GCAGAGCACGGC GGCT GCCGTGCTCTGA         GAAGGGATTAGTGCT 100 33
APT61_RS19180 4142348 .. 4142368 - -15.5  -5.28176   GCCAGCCATAAAAAA            GGCTCATGC AGA GCATGAGCC            TTTTTCGTCAACTAA 100 339
APT61_RS19175 NONE
APT61_RS19170 4140117 .. 4140133 - -10.9  -3.28924   GACCGGGCGCGACAA              TGCGCTT ATC AAGCGCA              GCATCCAGTGGCTGG  78 292
APT61_RS19155 4136955 .. 4136982 -  -9.8  -2.90992   AACCTCCCGAAAGTA        GGCCGGGTAAGCG TAG CGC-CACCCGGCA        AATCAAATCTTAATA  68 35
APT61_RS19150 NONE
APT61_RS19145 4134343 .. 4134363 -  -6.9  -2.62983   CCCACCGTGACATCA            GAACATAGC CTT GCCATATTC            CATGTCGGACGTACC  53 2
        deoD 4133446 .. 4133492 -  -8.1  -3.35813   CGGTACGGTAACGAA CTGTCTTGCTTCCTCCCTCCCCC AAA GGGAGAGGGAGGAGG-A-GATAA TTACTCTTTATCGCC  64 26
        serB NONE
APT61_RS19120 4129261 .. 4129273 -  -3.3  -2.71537   AGAGGTAATTATAAG                TCGTC AAA GACGT                TTAACGCATCTGCGA  42 6
APT61_RS19115 4127909 .. 4127940 - -10.2  -4.87803   TATCTCGAAATAAAA      GCAAAACGGCAACC TACA GGTTGCCGTTTTTT       TATGCCTGCGCCCTC 100 71
APT61_RS19105 NONE
APT61_RS19100 4123260 .. 4123273 -  -9.5  -3.70307   GGCAGCGAAGAAACA               CGGGC TGGC GCCCG                AAACCGCGTGGCTAA  72 450
APT61_RS19090 4122234 .. 4122244 -  -2.4  -3.18383   ATGTTCACCTATGAA                 GGGC TGG GCAC                 CGGGGTACAGGATTT  44 191
APT61_RS19080 4120828 .. 4120843 - -11.8  -4.90266   GTCAGCAATTAAAAA              CGGCGC ATTT GCGCCG               TTTTTTTTATGCCTT 100 42
APT61_RS19070 4118439 .. 4118461 -   -12  -5.78622   TTAGCCGAAAAAAAA           GCCCGCAC TGTTCAG GTGCGGGC           TTTTTTCTTTCTTTC 100 331
        thrA NONE
APT61_RS19060 NONE
APT61_RS19055 4113635 .. 4113662 -  -9.9  -5.60993   TTCTCCATAAAAAAA       GCCGGG--TGGCG GCTT CGCCATACCCGGC        CTGAGACACGGTACT 100 84
APT61_RS19050 4113159 .. 4113176 - -14.1  -4.30416   AGCAGTAATGCAAAA             CCCCGCC AGCT GGCGGGG              TGAGTTTAATGGTGT 100 31
APT61_RS19035 4109631 .. 4109660 - -13.5  -3.21199   CAGGGAGCAAGCGAA       GTCGCGTGACCGG AAGC CCGGTCACGCGGG        AATGATTACAGCAGT  88 31
        mogA NONE
APT61_RS19025 4107523 .. 4107548 - -18.3  -3.54029   TCGCACTAACGACAA         GGCCGGGG-GGC TTC GCCTCCCCGGCC         AAAGCGTTAACCGGC 100 32
        dnaK 4101410 .. 4101452 - -11.8  -3.01924   TATCTGCCCCTAACA TGCGTGCACGGGCGGAGAGG AAA CCTCTTCGCCCGTGCCAGTG TATTACCCGTTCAAA  78 47
APT61_RS18995 4100206 .. 4100225 - -13.6  -5.28176   TTCAGCCATAAAAAA            GCCCGGAA TCGC TTCCGGGC             TTTGAGAAAAACGTC 100 51
        nhaA NONE
        nhaR 4097916 .. 4097930 -  -8.5  -3.90744   TGCTTGTTTAAAGAA               CCCGC TTAAC GCGGG               TTTTTTTATGCCTTC  73 39
APT61_RS18975 NONE
        ileS NONE
        lspA 4092908 .. 4092963 -  -9.1  -3.01924   CATTGCTCTTTAATA TTGCC-TCG-CAGTTTGCCAGGT-GGCG CTT CGCTTACCCGGCAAACTGGCGTTGGCAT ATTCGGTAGGCCGGG  66 69
APT61_RS18960 NONE
        ispH 4091454 .. 4091476 - -12.1  -5.27477   ACCTGAATGAAAAAA           TGCCAGTCA TTCAG TGACTGGCA           TTTTTTAAACCTTAC 100 37
APT61_RS18945 4089661 .. 4089677 -  -7.9  -2.79302   ATGATCGCCAGGATA              TGGCCCG CTT CCGGCCA              TAGAAAAAAGTACGT  59 188
APT61_RS18940 4088626 .. 4088644 - -11.8  -4.22524   ACATTCAAAATTAAA             GGGCAATA AAA TATTGCCC             TGTGCAATCAATTGA  91 80
APT61_RS18935 4087081 .. 4087097 -  -3.7  -2.56914   GAGCGCAGCAAGGCA              TAAACAG ATT CTGATTA              TTTAGCGGTCTTACG  42 23
        carB 4083731 .. 4083744 -  -9.5  -5.82281   AAAGACATAAAAAAA               CCCGC CGAA GCGGG                TTTTGAGAGCAATCT 100 48
APT61_RS18925 4083102 .. 4083122 -  -9.7  -3.62572   TATCATCAGGCTAAA            CTGTAGCGT AAT ACGCTACGG            TCAGGGAAAAATGCA  76 55
APT61_RS18920 4082796 .. 4082817 - -14.5  -3.71487   CACCAGACCGAACAA           TGCAGTGGC TCAG GCCACTGCA            TTTTTTTATCAGTTA  95 34
APT61_RS18910 NONE
APT61_RS18905 4076931 .. 4076977 -    -3  -5.08824   CCCGGATGCAAAAAA TTGCCGCCACTATACGGAAAG CTTAAT CTTTC-GTCGACTGGCGGCAG AGTAAAGAACAGGAA  74 69
        folA 4076390 .. 4076420 - -16.2  -2.94099   GCGTCGTAGCAGAGA       GCTGCACCTCTCCC GTG GGGAAAGGTGCAGT       AAAACATTAGCGGCG 100 32
        djlA 4068366 .. 4068376 -  -4.6  -4.07568   CGCGTGCTGTTAAAA                 CCGA TTA CCGG                 CCGCTCGCACCAGCT  62 250
APT61_RS18830 4057118 .. 4057130 -  -4.8  -3.16564   CGGTCAGGTGACGAA                GCAG GGATT CTGC                GAAGAGAGGCCTGCT  50 119
APT61_RS18825 4056288 .. 4056306 -    -8  -4.14739   TTAGCGAGCGGAAAA             GCCAGCGC GTC GCGCCTGC             TGGGGATCCACTGAC  75 46
APT61_RS18800 4049625 .. 4049649 -  -8.6  -3.14564   TTACCCTTCCAGCAA          TGCTTCAGGC AAACA GCCTCAAGCA          CCCGCGTGAACTCTA  64 73
APT61_RS18795 4049010 .. 4049032 -  -2.7  -3.61089   CGTCAACAACGAGAA           CCTTATCTC TTACC GAACTAAGG           CTTTCAGCTTTTGTA  49 12
APT61_RS18790 4047879 .. 4047903 -  -5.7  -3.10236   AATTGAATTTTAAGA          GGCATAGTTTT GCA AAATCAATGCC          CTGTAATGTTTGCAA  55 281
APT61_RS18785 4045593 .. 4045615 - -14.8  -4.00066   CGCATAAGGTATAAA           CAGCGCGGCC AGA GGCCGTGCTG           TTTTGTATGAACCTG 100 265
APT61_RS18775 4043045 .. 4043063 -  -8.9  -2.92924   TTCAAACGAGGAAAT             CATGCTC AAAAA GAGCATG             CATTCTGCGAGTACA  66 270
APT61_RS18770 4041131 .. 4041155 - -12.2  -3.69256   ATTCAGGTAACACAA          GGACGACACC GGAGT AGTGTCGTCC          TCAGTTTGCAGGTCA  88 86
APT61_RS18765 4040479 .. 4040490 -  -4.4  -4.31085   GACAGGAAGTCAAAA                CTTC AGTT GAAG                 CGTATCGGCAAACTG  62 8
APT61_RS18760 4039401 .. 4039419 -    -9  -3.02263   AGATCTGCTTTAATA             TATACAGT TAA ACTGTATA             TATGGGGGTTTTCAT  66 446
APT61_RS18750 4038967 .. 4038986 -   -10  -2.50195   ATGCAGCAGGAATAT            GCACGGTA CGCT TACCGCGC             TGAAAACCAAATAAC  66 193
APT61_RS18735 4035109 .. 4035135 -  -4.5  -4.25104   GGTGCTTCAGTAAAA        GTG-TCAGAGAA GGAA TTCTCTGATCTC         ATGACCGCCATGAAG  64 215
APT61_RS18715 4031086 .. 4031104 - -11.7  -3.28684   AACCACGGAGATTAA             GGCCGCA CTGAC TGCGGCC             GGGACGCCAATCGGT  75 356
APT61_RS18700 4029951 .. 4029969 -   -16  -3.05596   TATGGGGTGATTTAA             TGGCCCGC AAA GCGGGCCA             TTAAAAAAGGTGCCT 100 93
        leuO 4023462 .. 4023500 -    -4  -5.06961   ACGAACAAAAAGAAA   GTCAGGATAAATAACA ACAACAG TGCAATTTATCCTGAA   GTCGTTTAGCGGCGG  77 31
APT61_RS18670 NONE
        ilvH 4020856 .. 4020876 -  -9.7  -5.93809   GGTGCACAAAAAAAA            GCCCGGT CATTCAT ACCGGGC            AAGCTAGAGGCGAAC 100 51
APT61_RS18660 4019687 .. 4019712 - -13.3  -2.66395   ATTCAGGATGAGAAT         TTCAGGGCAGC TTTC GCTGCCCTGAT          GTCTTTACGCGCGGC  84 30
APT61_RS18655 NONE
APT61_RS18650 NONE
APT61_RS18645 NONE
APT61_RS18640 NONE
        murE NONE
        murF NONE
        mraY NONE
        murD NONE
APT61_RS18615 NONE
        murG 4008041 .. 4008054 -  -8.1  -3.57144   GCTGCGAGGGTTAAA               CCTGG GCTG CCAGG                CTCACTTCTTTTGCC  66 7
APT61_RS18605 NONE
         ddl NONE
APT61_RS18595 NONE
        ftsA NONE
APT61_RS18585 4002204 .. 4002226 -  -7.7  -3.08312   AAGTTACTTATCCAA           CCGAGAGTG TATAT CACTATCGG           GCGGCCAGTTTAGCA  60 75
        lpxC 4001190 .. 4001233 -  -4.5  -5.69262   GGATAAAAACAAAAA CGACTGGTCTTGCTGGC CGGAGAGAGT GCCAGGTCAACCAGTCG AATTTAAATAACGGG  93 49
APT61_RS18575 4000458 .. 4000473 -  -3.9  -3.66497   TAATAAATTCTCAAA              CGCCC CATCAT GGGCA               GTTAAATTAAGGTAT  55 55
        secA 3997701 .. 3997718 - -12.7  -5.26316   TGATTCCATAAAAAA             GGCGCAG ATAT CTGCGCC              TTTTCAGTTGGTTTA 100 45
APT61_RS18565 3997263 .. 3997288 -  -9.7  -4.20696   GCAGTAACTGTAAAA         GCCTGCT-GGCG CTT CGCTTAGCAGGC         TACAACTTCCCCACC  83 25
APT61_RS18545 3994386 .. 3994408 - -20.6   -3.2963   ATGAGTGCGGGATAA           CGCTGGCGCG AAC CGCGCCAGCG           AGCGAGCATTACAGG 100 34
APT61_RS18520 NONE
APT61_RS18515 3988724 .. 3988748 - -12.9   -4.4078   TCGCTGGAATGAAAA          CGGGATGCC TGATTTT GGCATCCCG          TCAGCGGATACAGTG 100 62
        pdhR NONE
        aceE NONE
        aceF 3978738 .. 3978755 - -14.1  -5.31275   GGTTACCAGAAAAAA             GCCGGCC GTCA GGCCGGC              TTTTCTATTACATCA 100 33
APT61_RS18480 3977126 .. 3977141 - -10.4  -6.41881   CAGAATAAAAAAAAA              GCGGCT CATG AGCCGC               TTTTTTATTGCCGGA 100 47
APT61_RS18465 3971598 .. 3971617 - -11.4  -5.85244   AATGAAAATAAAAAA            CCCACCGC GGTT GCGATGGG             TCTTGCAGGCCCGGT 100 91
APT61_RS18460 3971085 .. 3971115 -  -9.9   -2.7395   AGAGATGCGCGAAAT      TTACTACGGCCGCA ACAT TGCGACCGTA-TAA       GGCATCGGTGGAGCA  66 56
APT61_RS18440 3967220 .. 3967237 - -11.3  -4.72729   GAAGTAAAAGCAAAA             CGGCAAC CAGG GTTGCCG              TTTAAAAGCTCCGGG 100 71
APT61_RS18430 3963995 .. 3964011 - -12.3  -4.68645   CAGGTAAAAGCAAAA              CGGCAAC CCG GTTGCCG              TTTTTTGGCTTTGCT 100 96
APT61_RS18420 NONE
APT61_RS18415 3961458 .. 3961486 - -14.5  -3.10498   TAAGCGTCAATAAAG        CGGCCCGGCAACA GAG TGCCGCCGGGCCT        GAGGATCAACTGCGC  91 31
APT61_RS18410 3960907 .. 3960933 -  -2.8  -3.25486   ATTCAATACGAAAAT         CGGACGCCATTG TAA CAAAAGCGGCAG         CAAAACCCATGATTA  45 47
APT61_RS18405 3959587 .. 3959627 -  -5.4  -3.36492   CTTTGAAGGTGATAA CGACATGAAAC-GTACCGC GAAA GCGATTCCGGTTCAGGTCG  CCTGATCGTTATCCT  54 34
APT61_RS18355 3950061 .. 3950085 - -10.7  -2.74784   ATCTCTCAAAATTTA          CGCCCTCTCCT TGC AGGAGAAGGCC          GGGATGAAGGCCTTA  74 57
        mrcB 3947423 .. 3947446 - -16.8  -4.15453   GAATTGAGGTGAAAA          GTCCCTCTCC CGCA GGAGAGGGAC           TGATGATTAATTACC 100 32
APT61_RS18345 3944937 .. 3944955 - -14.6  -4.99947   CTTAAGTAAAGAAAA             GGGCACGA AAA TCGTGCCC             AAATTTAAAGATCAG 100 37
APT61_RS18340 NONE
APT61_RS18335 NONE
APT61_RS18330 3941096 .. 3941120 -  -7.2   -3.7918   AGAGGATATCAATAA         CACCATCGACGC AGC GCGTCG--GGTG         TTTGCGAAGCTCTGA  69 148
APT61_RS18320 NONE
APT61_RS18315 3937794 .. 3937812 - -14.6  -4.73108   GTCATAAAAGCAAAA             CGGCAACC CAG GGTTGCCG             TTTTTAATGTTTGCT 100 90
         dgt NONE
APT61_RS18290 3932452 .. 3932481 - -15.1  -4.33767   AGAAAGGGATGAAAA       CGCCCCTGTTTCC AGAC AGAAACAGGGGCA        GAACAACTTACTGCA 100 33
APT61_RS18285 3931112 .. 3931130 - -14.6  -4.93696   TGCAAACACTAAAAA             CGGCAACC TCT GGTTGCCG             TTTTGCGTTTCCGTA 100 67
        rpsB 3925056 .. 3925074 - -10.2  -5.24449   TATAAATTGAAAAAA             GGGGCCGA TAA TTGGCCCC             TATTCATACACGGTA 100 62
         tsf 3924102 .. 3924140 - -17.7  -2.56095   TTTACACGTAACGTA  CA-CAAAAAGAAGCCGCC CTCA GGCGGCTTCTTTTCGCTG   ATTAAGACTGTTTAG 100 27
APT61_RS18250 3923190 .. 3923200 -  -8.2  -3.44319   TTTAATTCATGACAA                 CGCC AAA GGCG                 CGTCCAGGTAAGATA  69 90
         frr 3922481 .. 3922517 - -12.4  -4.59376   ACCAGCAAAGCAAAA   CGCCGC-CAGCAAAGCCC ATT GGGCCTT-CTGTACGGCG   TTTTATCAGATTACG 100 48
APT61_RS18240 3921126 .. 3921143 -  -8.4  -5.08824   CCTTTACGTAAAAAA             GCCGTG TCATAC CACGGC              TTACCTGACCACGTA  93 127
APT61_RS18235 NONE
        cdsA NONE
APT61_RS18225 3918062 .. 3918079 -  -2.7  -3.01712   GCGTTCTTCCTAACA             CTCTC TTACAACC GAGAG              AAATCATTGAAAAGT  43 13
APT61_RS18220 NONE
APT61_RS18215 3915000 .. 3915010 -  -6.8  -3.08464   GCATTACTTATTTAA                 CCTG TTT CAGG                 ACATCAGCGGTGATG  55 7
        lpxD 3913900 .. 3913937 - -13.4  -3.97139   GAATGGCAATAATAA   CACGGCCTGCCGGTTT ATAAGA AAGCCGACAGGCCGGG    AAGTATGCGTTTAAC 100 51
APT61_RS18205 3913401 .. 3913422 -  -4.3  -2.77899   CGGTTTTATCAATCA           CGTATCAGG CCTC CCGGCTACG            CGCACACATCATGGT  45 8
APT61_RS18200 3912621 .. 3912636 -  -2.6  -3.43151   TCAACCATTAACGAA              TCAGACC ACG GGT-TGA              GCGTGCGAAGAATTC  47 2
        lpxB NONE
        rnhB NONE
        dnaE NONE
APT61_RS18180 3906345 .. 3906362 -  -8.4  -5.64274   GCAGGCATAAAAAAA             GCCGCA ACGATG TGCGGC              TTTTCAGAGTATGGC 100 46
APT61_RS18175 NONE
APT61_RS18170 3903655 .. 3903675 - -13.3  -3.13522   ATCTGTGCAGGAAGA            TGCCCGGCA CGT TACCGGGCA            ATTCCCAAGGAGGCA  88 45
APT61_RS18165 3902013 .. 3902028 -  -4.6  -4.52857   ATCGGTCAGAGAAAA              GGCAGC CTAT GCTGCT               GCGAATTTACTGGTG  70 337
APT61_RS18150 NONE
APT61_RS18145 NONE
APT61_RS18140 3899932 .. 3899961 - -15.9  -2.61602   TCAAGGCATAAGCCA       CAAAAAACCCCGC TTCG GCGGGGTTTTTTA        TTTCAGTTATTTGCT 100 32
APT61_RS18105 3893415 .. 3893439 -  -7.1  -2.62263   AGGTGGCGTATATTA          CGCTTTCCTCT TTC AGAGTCAAGCG          ATTATTTTCGCTTTT  56 180
APT61_RS18100 3891653 .. 3891666 -  -2.3  -2.72471   TTTTCATCAGACAAT               CTGTG TGAG CACTG                CAAAGGCAGGTTCTT  39 36
APT61_RS18095 NONE
APT61_RS18090 3891355 .. 3891388 -  -6.7  -4.49756   TTTTAAAGAGCAAAA     CTTCGCAGCGCACCT TCTC AGGTACACTCTGAAG      TTTTCTTGTTGTCGC  77 51
APT61_RS18085 NONE
         rrf 3888071 .. 3888087 -  -6.5  -2.71483   ATACTTCTGTAACCA              CCGGG TTACTGC CCCGG              TTCACTACGTAATTT  53 44
APT61_RS18075 3887942 .. 3887963 - -15.9  -5.62045   ACAGACAAGAAAAAA           GCCCTGAGC GTTA GCTCAGGGC            TTTCAATAAGTGGCG 100 36
        dkgB 3886955 .. 3886972 - -11.3  -4.21462   AGCGAGCATGTAAAA             CAGCTCC CGAA GGAGCTG              TAAGAGGGTTAAGGG  87 61
APT61_RS18060 3884678 .. 3884705 - -10.6  -2.99471   CGACCTCTATAGACA        GAACCCG-TCCAG AAA CAGGAGCGGGTTC        TAATGTTATAGGGTT  72 113
APT61_RS18055 3883807 .. 3883831 -  -8.6  -4.91852   TTGATGAAAAATAAA         GGGCAGCACCT GCGC AGGC-CTGCCC          CACGGCAGACCTGAC  88 47
APT61_RS18050 3882975 .. 3882996 - -11.6  -4.87893   AACCTGAAGTAAAAA           GGCACCGA TTCCCC TCGGTGCC            TTTTTTGTTTTATCC 100 35
APT61_RS18035 3879641 .. 3879653 -  -7.7  -5.27779   GCGAACACGAAAAAA                CCTTC AAC GAAGG                CTACCGCCTGACCAC  93 381
APT61_RS18025 3878623 .. 3878637 -  -2.8  -3.73294   CAAAAACACTCCAAA               CGGTTA TTT TAACAG               CGCTTCCGCCGCATT  51 40
APT61_RS18020 3878409 .. 3878434 - -16.3   -4.2408   TGATAAAATGACAAA         GGCCTGAATCA TTGC TGATTCAGGCC          TTCTTAATAGTGGCG 100 36
        gmhA 3874176 .. 3874197 - -13.7  -3.22653   ATCACCTCCACAACA           GC-GGGGGCG ATA CGCCCCCAGC           GAAGTCTTACTTGAC  88 32
APT61_RS18000 3872951 .. 3872961 -  -2.4  -4.13945   AGGGCGATTTTAAAA                 GCCC GGA GGGG                 TTCTACAGCGTTCAG  59 455
APT61_RS17990 NONE
APT61_RS17985 NONE
APT61_RS17980 NONE
APT61_RS17975 NONE
APT61_RS17970 NONE
APT61_RS17965 NONE
APT61_RS17960 3866170 .. 3866191 - -11.5  -5.26875   GGCTTAAGTAAAAAA           GCAGGCCGC TGTC GCGGCCTGT            ATTATTCAGAGGATC 100 31
APT61_RS17950 3863868 .. 3863889 -  -2.2  -4.15044   GGTCTGTTCAAGAAA           CCGTACCC GGATAT GGATATGG            TTTCCATCGGGCCAA  59 238
APT61_RS17940 3861795 .. 3861819 - -16.5  -5.43866   CAACGGCGAAAAAAA          TAACGCCCGGC ATC ACCGGGCGTTA          AAAATGTAGGGATTA 100 38
        frsA NONE
APT61_RS17930 3859979 .. 3859998 -  -7.8  -5.63517   TCGCGAAATAAAAAA            CCCGGC GCGGTATG GCCGGG             TTTTTTTATTGTCTG 100 56
APT61_RS17920 NONE
APT61_RS17915 3856209 .. 3856228 -   -15  -2.64933   TAGTCAGGGATAGCA            CGGGCAGC AGCC GCTGCCCG             CGTAGGGATTATGCC  90 34
APT61_RS17905 3853074 .. 3853090 -    -3  -2.62184   GCTTTTGTGAGAGTA             GC-GCAA CCTT TTGCAGC              AGGGAAGAGAATGTT  41 136
APT61_RS17900 3852161 .. 3852187 - -10.1   -2.8382   GAAATAACGGTAAAG         CGACCAGCGGG GCTGA CCGGCTGGTCA         TTCTCTGTAATTTTT  71 122
APT61_RS17875 3847558 .. 3847574 -  -7.3  -2.89564   GTCTCACCGGATAGA              CGCTAAT CAA ACTAGCG              GACATGCCGGTCGAG  57 20
APT61_RS17870 3846975 .. 3846987 -  -3.3  -4.13561   GCGGCGCAAAAAACA                CGGTG CGC CAACG                CCGTTGTGCCTGACT  58 54
APT61_RS17830 NONE
APT61_RS17825 3837802 .. 3837818 - -15.1   -4.8543   TAACCTGGATAAAAA              GGGCCGC ATC GCGGCCC              TTTACTCTTTCACCC 100 27
APT61_RS17810 NONE
APT61_RS17805 3832308 .. 3832321 -  -3.8  -4.32177   CCATTTCATAATAAA               GGCA TTTTTC TGCC                GGTTAGAGCAAATGC  65 124
APT61_RS17800 3831243 .. 3831259 -  -3.5  -5.37345   CGGAATGATAAAAAA              GGCGTGC GAA GCCCGGC              GCAGCGGGGCGTCTG  81 106
APT61_RS17795 3829752 .. 3829779 -  -6.9  -3.23853   CTCCCTCAAGGAAGA        GGGCAGGATGT CGTTAC ACCTCCAGCCC         GGCACGGAACTGGCC  57 11
APT61_RS17775 NONE
APT61_RS17770 3823380 .. 3823422 - -12.9   -2.5092   CAATATTTCAGGAAC GGACGTGAACGTCCGCTTCTG GCA CA-AAGCGGACATTC-CGGCC TTTTACATTCGTTCT  81 190
APT61_RS17760 3821844 .. 3821854 -  -2.4  -3.84271   TGATAAGAGGAATAA                 TCGC GGT GCGG                 AAGATGCTGTGGGTC  52 39
APT61_RS17755 NONE
APT61_RS17750 3819458 .. 3819468 -  -6.8  -3.21099   TCTCCTTATTATTAA                 GCCA GGG TGGC                 GTTATCAATGACAAA  57 11
APT61_RS17745 NONE
APT61_RS17740 3817355 .. 3817376 - -10.9  -3.33509   GCCGAAATAATTTAA           TTACCGACC CGAA GGCCGGTAA            TTGTTAACATTGATA  78 46
APT61_RS17730 NONE
APT61_RS17725 NONE
APT61_RS17720 3809034 .. 3809046 -  -4.8  -2.52464   CGGCTTCTGAAGCTA                TCCC CTGCC GGGA                ATGGCTCAGTCAGAA  46 387
APT61_RS17715 3807925 .. 3807935 -  -6.8  -2.82987   TGAACAGTTACCACA                 GGCT CAC AGCC                 TGCAGTCAGATAAAA  54 116
APT61_RS17710 3806417 .. 3806434 -  -5.6  -3.98236   AAAGGGGATGAGAAA             CTGAAC ATGAAA GTTCAG              GGTCAGCTGATATAC  64 282
APT61_RS17700 3804652 .. 3804681 - -23.7  -2.83164   CCATTCAGGAGGAGA       TACCGCGTGCCGC TCTT GCGGCACGCGGTA        GTTCAACATGCTTTT 100 387
        tauA NONE
        tauB NONE
APT61_RS17655 NONE
        tauD 3792645 .. 3792697 - -10.4  -4.78149   TGCAGAAGGTAAAAA CCG-CGTCGGACAGCCCCCTCCCCCC TTT GGGGAGAGGGTGAAAACCG-CGTCGG ACAGTCCCCTCGCCC 100 464
APT61_RS17635 3786433 .. 3786454 - -15.9  -4.15453   TAACTGACGCTAAAA           GCGGGGAGA TATC TCTCCCCGC            ATCAGGCATGTTACC 100 36
APT61_RS17630 3785567 .. 3785577 -  -2.4   -5.0133   TATGGCGCCAAAAAA                 CGGG CGT CCGG                 GCATTATTCAGAAAA  74 220
APT61_RS17620 NONE
APT61_RS17615 3781538 .. 3781570 -  -4.2  -5.28481   CACTTAAGTAAAAAA     TCTGTGATGTGCG GCAAAATT CGCACATC-CAGG      AGAATTCTCCAGGCC  80 436
APT61_RS17605 3780710 .. 3780732 -  -6.2  -3.72576   GTCGGCGTCAGCAAA           GTGAACAGCG AAG CGCAGTTCAG           CGACGCGGTACGTCT  61 509
APT61_RS17595 NONE
APT61_RS17590 3777879 .. 3777897 -  -4.6  -3.51721   AATATAAACGCAGAA             CCATCATT TTT AATTATGG             ATAACGACAGTCCTG  55 64
APT61_RS17585 NONE
APT61_RS17580 3775886 .. 3775916 -   -14  -5.00616   GTGCTGGTGAAAAAA       CCACCCGGCAGG CGATTTT CCTGCCGGGTGT       TGCTTATTTAAGACC 100 29
APT61_RS17575 3775408 .. 3775425 -  -2.7  -2.62463   TTCATCATTCATAAT             TTTTGGG AACA CTCAAAA              GCATTTTCCCAAATT  41 110
        adrA 3774132 .. 3774146 -  -4.2   -3.5394   AAATGGTGCTCGAAA               CCGG CAAGCAT CCGG               GCGAACTGAAAGATA  51 183
APT61_RS17560 3772776 .. 3772826 -  -2.7  -3.81557   TCCTGTAAAGAAATA GTTG-CACTGAC-GGTGCGCTCA CCTTACC TGAACCCACCCGCCATTGACAAC CCCGGAAGGGAGTAA  54 71
APT61_RS17555 NONE
APT61_RS17550 3771794 .. 3771804 -    -4  -3.53444   TTATCGCTTTTTAAA                 TAGT GTG ACTA                 CGGTATCGTTTTTTC  52 57
APT61_RS17545 NONE
APT61_RS17540 3770538 .. 3770561 -    -8  -2.93393   CTTTACGCCAGAAAT          CGGAGCCGGG TTAA CCCGGCTCTT           TTTTTATAGATAACG  60 29
APT61_RS17530 3768560 .. 3768572 -  -3.3  -3.62591   GGGATAAGGGGGAAA                GACCG CAC CCGTC                ACTATATCAATGCGG  53 32
APT61_RS17515 NONE
        phoR 3761919 .. 3761940 - -15.9  -4.07246   TGACTGCAAAGCAAA           CAGGCCAGC TTAC GCTGGCCTG            TGGCAATATCTGATT 100 53
APT61_RS17505 3760197 .. 3760219 -   -17  -6.17033   AAAAAAAACAAAAAA           CCACGGGGCA TTA CGCCCCGTGG           TTTAACATTCAGCCG 100 45
        proY 3758760 .. 3758779 -   -15  -4.91109   GGGGGAGGAGAAAAA            TGCCCGGC GTTT GCCGGGCA             TTCTGATTACTGCAC 100 32
APT61_RS17495 3756738 .. 3756755 - -14.1   -4.2558   CACGGTTTACGAAAA             GGCCCGC AGAT GCGGGCC              TTTTTTATTGGCGAG 100 107
        queA NONE
         tgt NONE
        yajC NONE
        secD NONE
APT61_RS17460 3749810 .. 3749829 - -13.6   -6.0427   AGCAGATAAAAAAAA            TCCCGGTC ATCA GACCGGGA             TTTCGATAGCGCGCT 100 48
APT61_RS17455 NONE
APT61_RS17450 3748619 .. 3748636 - -11.3  -5.02074   CCACCCGGCAAAAAA             GCCAGCT CAAG AGCTGGC              TTTTTTATTGCTTAA 100 30
APT61_RS17435 NONE
        ribD NONE
        ribH NONE
        nusB 3744141 .. 3744179 - -13.9  -6.17669   AAGAAAATAAAAAAA  CCGGAGCA-CGCACCGCC CAAA GGCGACACGATACTCCGG   CTTGCGGATCACTTT 100 34
APT61_RS17415 3743046 .. 3743073 -  -9.8  -5.65927   GATTCAAATAAAAAA        GCCCGGT-GGCGC TTC ACGCGTACCGGGC        TTTTCAAAGTCTCTG 100 90
APT61_RS17390 3737237 .. 3737255 - -14.6  -4.68645   GAGGTAAAAGCAAAA             CGGCAACC AAA GGTTGCCG             TTTTTTATGTTTCCG 100 101
APT61_RS17375 3735071 .. 3735089 - -10.3  -6.02546   GCAAATTAAAAAAAA             GAGCCGT TTTGC ACGGCTC             TTTTTTATTTATCCG 100 47
APT61_RS17330 3725294 .. 3725317 - -15.4  -4.41241   TAAACCCGGACAAAA          CAAAACGGCC CGCA GGCCGTTTTG           ACGTAATCTTTATGC 100 81
APT61_RS17325 3723687 .. 3723708 - -11.5  -5.93809   GTGTGATAAAAAAAA           CCCGCCGCC GGAA GGCAACGGG            TTTTTTGCTCAAACT 100 60
APT61_RS17320 3722813 .. 3722840 -   -12  -2.60075   CTGCTCGTAAGCAAG        GTGCCGCCCTAC CATA GTATAGCGGCAC         ACCCGCGCCGTGGGC  78 42
        clpX 3721399 .. 3721427 - -14.7  -4.66163   ATGTTTACGGAAAAA        TAAAAGGGGGGAT AAA ATCCCCCCTTTTT        GATTAACTGCTTGTA 100 53
APT61_RS17310 3718854 .. 3718883 - -12.2  -5.72616   AGCTATACAAAAAAA       GGCTGGCAAGCC CGAATT AGCTTACCAGCC        TTGTTTTTATTGACG 100 58
APT61_RS17305 3718377 .. 3718396 -   -10  -5.72622   TGGACAAACAAAAAA            GGCACATC AAAT GATGCGCC             CTTGTACTTTTCAAC 100 62
APT61_RS17300 3716288 .. 3716303 - -11.8  -4.39571   TGCAGAAATGGAAAA              GGCCGC GAAA GCGGCC               TTTAGTTGTTGCATT  93 72
APT61_RS17295 3715769 .. 3715803 -  -8.7  -3.37796   GGTTATTATTTATAA     GATTCAGAGGTCATA ACTGG TATGACCTCTTTATC     CTGGCAAATTTTAGC  66 55
APT61_RS17290 3715017 .. 3715039 -  -6.3  -3.63968   CGTGAAAGCCCTAAA           CCATGCC GTAAATCTT GGCATGG           CCAAAGATATCCGCT  61 324
APT61_RS17275 3711867 .. 3711884 - -11.3  -6.09196   GGTAAAATAAAAAAA             GCCAGAC TATC GTCTGGC              TTGCTGGAAGGGTCT 100 43
APT61_RS17265 NONE
APT61_RS17260 NONE
APT61_RS17255 3706575 .. 3706598 - -12.5  -5.94597   GAAGATGAAAAAAAA          CGCACCATG ACAGTG CATGGTGCG           TTTCATTTTTGCACC 100 81
APT61_RS17250 NONE
APT61_RS17245 3704768 .. 3704787 - -13.6  -5.03994   GGGCACATACAAAAA            CGGCAACC TCTC GGTTGCCG             TTTGCTTTTACTTAA 100 37
APT61_RS17235 3703042 .. 3703063 - -15.9  -4.72272   TGGCGGTATTAAAAA           GCCCCTCTC AGGC GAGAGGGGC            TGGCAACATTAAAGC 100 34
         ffs NONE
APT61_RS17220 NONE
APT61_RS17215 3701635 .. 3701663 - -17.7  -4.70659   GGGGAGATTCAAAAA        TGTCTGACTGTAA TCA TTACAGTCAGACA        TTTTCAGCAGGAAGG 100 44
APT61_RS17205 3699448 .. 3699462 -  -3.5  -4.21465   CGCAAAATCAAACAA              CGC-GC TCAG GCTGCG               GGGCTAACATACGCG  60 3
        lacI 3698226 .. 3698240 -  -4.2  -3.60419   ATTTTCAAACTACAA               TGCCCT GTC AGGGGA               ACAGGGTAAAGCGGG  52 75
        lacZ 3695059 .. 3695086 - -11.4  -3.17571   AACCTCCGAAGTGAA        TG-TGCGGCCACA TGG TGTGACCGCATCA        GCGATTAAGTTTAGT  79 36
APT61_RS17190 3694648 .. 3694681 - -10.2  -2.69964   TCCGGAATCACACGA     CTAGCGCCCGGCGG AGTGTA CCGCCGGGCATTAT      AATTATTCATCCAGC  69 28
APT61_RS17155 3685545 .. 3685572 -  -4.1  -4.89233   GATGAATACCAAAAA        GACCGGCGTGA AGAATA TCACGGCAATC         GGGTGCAAAATAGCA  74 72
APT61_RS17150 3682126 .. 3682152 -  -7.2  -3.61103   TAACCTTATTCCAAA         GGGAGAGGGAAC CTG ATCCGCCCTCCC         CTTTAGAAAATCATG  64 36
APT61_RS17140 3680949 .. 3680978 -  -6.5  -2.53392   AAACGGTCGAATTTA       CTGGCTG-CGCA CAAGAAT TGCAACAGCCAG       TCTGAGGATTATTGC  52 34
APT61_RS17135 3680246 .. 3680270 - -16.5  -3.09492   GGGGTAATGCTAACA          CAACCTCACCC GTT GGGCGAGGTTG          TGGGCGGGAGGATTA 100 38
APT61_RS17130 3678241 .. 3678259 -    -6  -4.03586   CGTTAAAGATAACAA             CCGTAAGT CAG ACTCACGA             TCAAATGGGTCGAAT  66 26
APT61_RS17125 3677881 .. 3677894 -  -2.3  -2.64099   GGTTTGCATCAGAAC               GGCAT CTTA AAGCC                CGGTGGCAGCTGCAT  39 5
        recR 3677163 .. 3677174 -  -2.2  -3.25823   GTCCTTTCATACTAA                GTCG ACCT CAAC                 AATGCCATTTAATGG  43 120
APT61_RS17115 3675245 .. 3675272 - -17.8  -3.07443   GGAGAGGGTATTGAA        GTCCCCTCTCCCC TTT GGGGAGAGGGG-C        AGACGTTTAATTACG 100 36
         adk 3674254 .. 3674272 -  -8.2  -3.58726   TGCTGCGATAGATAA             GATGAGAA TTT TTCTCACC             CGGGGGCCCGGGTGA  69 174
APT61_RS17105 3673172 .. 3673203 -  -2.1  -2.57795   GCTACGAGTAACGGA      TGGGCCGGAAATG GTAGCA CAATCCCGGCCTT       TAACGCGATCAGCGG  39 34
APT61_RS17100 3671820 .. 3671835 -    -9  -4.97461   AACAAACACTAAAAA              GGCAAC TCAC GTTGCC               TTTTTGCTTTTACCT 100 35
        ushA 3666730 .. 3666757 -    -9   -5.7946   CCGGGAATAAAAAAA        GCCGGGTGGCGGC TAC GCCTTC-CCCGGC        CTACAACATGAAAAC 100 90
APT61_RS17065 3661778 .. 3661825 - -10.8  -2.71924   CAGGCGGCCGGAAAT CAGGTGGTGGGGTTGCAG-ATC GATTTT GATGCCGCAAC-CCACCAGCTG GCGGATTACGCTCGC  72 355
APT61_RS17025 NONE
APT61_RS17020 3652280 .. 3652316 -  -7.3  -3.06796   TTTTATGCTACTTAA   GT-GGAACGCGCCGGT ATATTA ACCGGCGCGTTATGAC    TGTAGAGGGGAATTA  59 38
APT61_RS17015 3650924 .. 3650949 -  -8.9  -5.08088   AATCGCTAATAAAAA         GCCGGATGCGC TCAT GCTTATCCGGC          CTACAGGTTCTGCCC 100 77
        cysS 3644519 .. 3644546 -  -9.9  -5.01732   AACGGCGTTAAAAAA       GCCGGGT--GGCG GCTA CGCCTGACCCGGC        CTGTCTTCTTGCATT 100 81
APT61_RS16945 NONE
APT61_RS16940 3638468 .. 3638492 -  -4.3  -4.04579   CCCACAAACACTAAA          GAGAATGAGAA CTA TACTCATTATC          CTTCTGTAATCAAGT  60 309
APT61_RS16935 3637163 .. 3637178 - -11.8  -3.04894   AATTTCGCGCAAAAT              GGCCCG TTGC CGGGCC               TGAGTTGTTATGAGA  78 45
APT61_RS16930 3634907 .. 3634922 -  -2.5  -2.50252   ATTTTTATAACAGAC              GGACG GTGGGG CATCC               CTGCCCCGATAACGA  39 50
APT61_RS16925 3632820 .. 3632845 - -18.3  -3.78329   CGGGAGCAAGTTAAA         CGCCGGGCAAC GGTT GCTGCCCGGCG          GGAGGCAGTCACGAA 100 34
APT61_RS16920 3630942 .. 3630965 -  -5.2  -4.19746   GCTACGTTAAAAGAA          CTCATGGCCC AGCA GAGCCAGGAA           AGTCAGGAGCGAATT  66 425
APT61_RS16905 NONE
APT61_RS16900 NONE
APT61_RS16895 3626860 .. 3626879 - -13.6  -2.72152   GCTACCATAAATTCA            TTGCCCGG CGTA CCGGGCAA             GGTGTTACTGCACGA  84 30
APT61_RS16890 3625425 .. 3625451 -  -5.2  -3.75738   GAGGAGCAGGAACAA         CAGCAGCT AGTACAGGCGA AGCTGCTG         AAGCCCTATATGGCC  58 402
APT61_RS16875 NONE
APT61_RS16870 3621033 .. 3621054 - -11.5  -2.68942   AGCCTTTTACAGAAC           GGGCTGCCG ATCC CGGAAGCCC            CCTCGCAAAAGATTT  75 39
APT61_RS16865 3620291 .. 3620311 - -15.4  -4.19624   GAGTGCTAAGACAAA            CGGGCCGC AGATA GCGGCCCG            TTACTTTTTACTGAT 100 26
APT61_RS16845 3617312 .. 3617328 -  -2.9  -2.87501   TTCGATTAAACATTA              TTCCCAC CAC GCGCGAA              ATTGTTGCGTGGCAT  42 6
APT61_RS16840 3616891 .. 3616920 - -14.3  -5.06414   TTGTGCCAATAAAAA       CGCCGGGTAGTGGC TAC GCC-CTACCCGGCC       AACCTTCGATGCCTT 100 40
APT61_RS16830 3612867 .. 3612904 -  -9.3  -4.07568   GGTGCTGGCGCAAAA   GCTGGTTCAGACC TTTCACATGGTC GATCTGAACCAGC    TTTACACCATTTTAT  78 112
APT61_RS16820 3609332 .. 3609377 - -12.5  -4.71426   GGTGGAGGAAGAAAA CCGAGCGGTTCCATCCCCCCA CAGG TGGAGGGAGAAAACCGGGCGG TACCATCACCCCACA 100 197
APT61_RS16815 NONE
APT61_RS16810 3604862 .. 3604872 -  -2.4  -3.14132   TGGCTGCTGGAGCAA                 GTCG CGC CGTC                 TGCGGAGAAGCTGGG  41 175
APT61_RS16800 NONE
APT61_RS16795 3602930 .. 3602941 -  -2.2  -2.76037   AGTGTAAAGCACAAC                GCCT GCAC AGAC                 TATGCCTTTCATGCA  40 45
APT61_RS16790 3602272 .. 3602288 - -13.7  -4.69549   AAGGTAAAAGCAAAA              CGGCGAC CTG GTCGCCG              TTTTTAGGGTTCGCG 100 119
APT61_RS16760 3596212 .. 3596242 -  -8.3  -5.38958   AGGCAGAAATAAAAA       TGCCCCGCCTG GCGATTAAT CAGACGGAGCA       ATACAGCTAAAGAGA 100 73
APT61_RS16755 NONE
APT61_RS16750 NONE
APT61_RS16745 3589995 .. 3590015 -  -5.3  -3.06538   AAGATAATTAAATTA            CTCATGGCG ATA CCCCTTGAG            CGCGTTCTCCATGTC  51 2
APT61_RS16740 NONE
APT61_RS16735 NONE
APT61_RS16730 3587151 .. 3587161 -  -2.4  -2.82327   CGTTTACAGCGAAAT                 GGGC GCG GCCT                 TCGTTTCTAAGCTGC  40 365
APT61_RS16705 3579249 .. 3579263 -  -5.6   -3.2594   AGGGCAATAAAATTA               CTGTGG ATC CCACCG               CCCTGTGTGTGTGAG  52 80
APT61_RS16670 NONE
APT61_RS16665 NONE
        entF 3564977 .. 3564993 -  -3.6  -4.36595   GAGCGAAAGTGAAAA              GACGGC TCCGT GCCCTC              TTCCCCTTAGGGCGC  63 108
APT61_RS16640 3560283 .. 3560299 -  -3.5  -4.86731   TCCCGGCAAAGAAAA              TCGCCGC TTC GCGGTGC              ACTCAGCTTATTCCT  73 276
APT61_RS16630 NONE
        entE NONE
APT61_RS16620 NONE
APT61_RS16615 NONE
APT61_RS16610 3553027 .. 3553081 - -13.4  -4.13014   GGGAGAGGGGGAAAA CAGTGCTCAGTTCTACCCCTATCCCC GTA GGGGAGAGGGGGAAAACAGTGCTCAG ACCTATCCTCTCTCC 100 495
APT61_RS16590 3548248 .. 3548273 - -18.3  -3.70446   TCACAGGGAATAGAA         GCCGGGTAGCG CTAG CGCCACCCGGC          ATTGTCTTTAATGCG 100 33
APT61_RS16585 3547975 .. 3548010 -    -6  -2.60496   CCTCGTTGCAAAGAT    TGGGTAGGCCTCTGCC GTCT GGCAGAGGCGTTTTCA     CGTGTTCTGGAGGGT  51 40
APT61_RS16570 NONE
APT61_RS16565 NONE
APT61_RS16560 3542268 .. 3542299 -  -4.2  -3.06696   TTCCTGGGGAAGAGA      GTCAGGGTGAGGAC ACCA GGCTCCACCCCGCC       ACGTCCGGGAAAGTG  47 41
APT61_RS16555 3540731 .. 3540766 -  -6.1  -2.54896   GCGGCACCGAACTTA    TACGCCGCAGCGTGGG CCTGT CCCACGTGGCGG-ATA    TCGATTCTATCCGCG  48 231
APT61_RS16545 3538315 .. 3538331 -  -3.5  -4.86731   TCCCGGCAAAGAAAA              TCGCCGC TTC GCGGTGC              ACTCAGCTTATTCCT  73 264
APT61_RS16525 3534794 .. 3534822 -  -4.7  -5.00616   GCCTGGCGTAAAAAA       GCCCGT-ATTTC GTGTTT AAAATAACGGGC        CACTGTAAAGCGAGC  77 61
APT61_RS16515 3532351 .. 3532368 - -12.7  -3.90112   GGTGCTGGAATGAAA             TGGGCGC AGAT GCGCCCA              TTGATACCGGGTGGC  93 233
APT61_RS16510 3530649 .. 3530670 - -14.5  -5.36441   CGGTGAGATAAAAAA           GAGGCTACC GTCA GGTAGCCTC            TGTGTTTTGCAGGTG 100 54
APT61_RS16500 3528322 .. 3528345 -  -8.8  -2.62263   ATCCGGCGCAGATGA          CCGACAGCAG TACA CAACTGTCGG           TTATGGCACCGGTAG  57 241
APT61_RS16490 3526814 .. 3526850 -    -2  -4.18094   CAAATTACGGCAAAA    CCGTCAGCCGCAGCGC GTTCG ACGCCGCGGTAGCCAA    AAGCTGGGGGCCGGA  59 223
        pagP 3523205 .. 3523218 -  -2.3  -4.63218   CCTTTTTGAAGAAAA               GTGAC AAAA GTCGC                GTTAATTTTCTCGCC  63 106
APT61_RS16470 3522853 .. 3522869 - -13.7  -5.68023   CCAGAACGAAAAAAA              CCCGCTC AGG GAGCGGG              TTTTGAAATTCTTGC 100 55
APT61_RS16460 3521337 .. 3521352 -  -6.8  -3.40597   TTCTTGACGTAAACA              GGCTGCG TTT CGC-GCC              TTAAAAACCCGACCT  59 114
        tatE 3521063 .. 3521076 -  -9.5  -5.64274   TCACCCATAAAAAAA               CCGGC TTTA GCCGG                TTTTTTTCTATCGCA 100 60
APT61_RS16380 3505269 .. 3505317 - -15.4  -3.23216   TTTTATCAGTAGTAA TAC-GACGCCACCACGATGCGTC ATCG GACGCATCGTGGTGGTCTCTGTT AAGGTTCAAACGGGC 100 24
        ubiF 3493593 .. 3493607 - -12.8  -5.28176   CTTAGTTACAAAAAA               GCCCGC TCT GCGGGC               TTTTTTGTTTTTGTC 100 98
APT61_RS16260 3484304 .. 3484325 - -18.7  -5.75342   TTGCTGCAAAAAAAA           GCGGCGGGG ATAT CCCCGCCGC            TCAGGCATTAACGCT 100 54
APT61_RS16255 3482471 .. 3482487 - -11.5  -5.83822   GACAGGTAAAAAAAA              CGCCGCA GTA CGCGGCG              TTTTTAAGAGGAGAA 100 46
        chiP NONE
APT61_RS16245 3480201 .. 3480226 -  -7.5  -4.68593   GTCATCATGCAAAAA         GCCCGGT-GGCG CTG CGCTTACCGGAC         CTGAGGGGATTTCCC  83 89
APT61_RS16220 NONE
APT61_RS16215 3475057 .. 3475076 - -13.6  -4.65153   TGAGAGAAAGCAAAA            CGGCAACC CTGA GGTTGCCG             TTTTTAGAGGTTCCA 100 81
APT61_RS16180 3466694 .. 3466713 - -13.6  -5.64274   CGAGGGATAAAAAAA            CCGCCACA TTGC TGTGGCGG             TTTTTTGTTGGTGCA 100 68
APT61_RS16175 NONE
APT61_RS16170 NONE
APT61_RS16165 NONE
APT61_RS16160 NONE
APT61_RS16155 3461672 .. 3461684 -  -4.8  -2.71712   GTTGTGTTTGCAAAT                GTGC GTTAT GCAC                TGATTTTTATATTAT  46 18
APT61_RS16150 NONE
APT61_RS16145 NONE
APT61_RS16140 NONE
APT61_RS16135 3458431 .. 3458450 - -12.2  -5.80951   ATGCAAAATAAAAAA            CGGTAACC CAAG GGTTACCG             TTTTATTTTTACCTT 100 54
        sdhC 3456045 .. 3456058 -  -3.1  -2.78384   GCGTTGCTTACCATA               CG-AGG ACT CCTGCG               AGAAGTGAAAGCACG  42 4
        sdhD NONE
        sdhA NONE
        sdhB 3452893 .. 3452921 -  -5.9  -3.85698   CTTTCGCCGTAGAAA        CTACCACGCACAC CAC GTGTACGTGCCGG        GGTTCACCTGCGAGC  64 302
APT61_RS16105 NONE
APT61_RS16100 3448806 .. 3448821 -  -3.2  -4.32046   CGGCTAAAAACTAAA              CGTCCA GCAG CAGACG               GGTTGGATCTTCCAG  63 5
        sucC NONE
APT61_RS16090 3446599 .. 3446616 - -12.7   -5.4833   GCAGGCAATAAAAAA             GGCCGCT GTGT AGCGGCC              AACCATGTCGAAACA 100 87
APT61_RS16080 NONE
APT61_RS16075 3441093 .. 3441111 -  -8.9  -4.99947   TTTAATGAAACAAAA             GGTCACA TGCGC TGTGACC             TTTTAATTGCTGGAA 100 44
APT61_RS16070 NONE
APT61_RS16065 NONE
APT61_RS16060 NONE
APT61_RS16055 3437275 .. 3437298 -  -7.5  -2.70138   ACGGAGAGTAAATAT          TTATGGGCC AGGGTA AGCCCATAA           TATTAACGGATAGTT  56 46
APT61_RS16050 NONE
APT61_RS16045 NONE
APT61_RS16040 NONE
        tolA 3434198 .. 3434216 -  -2.4  -2.59883   AAAACTACTAATCCA             CAGCCT CAAACGT AGACTG             TTTTGCTAACTTTAG  39 52
        tolB NONE
APT61_RS16025 3432249 .. 3432260 -  -2.2  -2.52896   TGATGTCTGAAGTTA                CTGC TCAT GCAA                 TTCTCTTAGTAAACC  39 31
APT61_RS16020 3431419 .. 3431460 -  -5.9  -2.78018   ACTGCTTAGGAAGTA TGCGGCAAGACCAGAAA AAACGCGA TTTCTGGTCATCCGGCA  ATCATCCCATCGCAG  52 27
APT61_RS16015 NONE
APT61_RS16010 NONE
APT61_RS16005 NONE
APT61_RS16000 NONE
APT61_RS15995 NONE
APT61_RS15990 NONE
APT61_RS15985 3430577 .. 3430607 - -16.3  -2.90763   TTCATATCGCAGATA       GCAAAAAGGCGCC TTTAG GGCGCCTTTTTAC       ATTGGTGGGTCGTGC 100 28
APT61_RS15980 NONE
APT61_RS15975 3428370 .. 3428382 -  -3.3  -2.91274   GCCACCTCAATGAGA                TCGCC TCC GGCCA                CGCCCATCATCATCA  43 44
APT61_RS15960 3425426 .. 3425446 - -16.9   -5.5604   CCAAGTAATAAAAAA            GCCCGGTCA CGA TGACCGGGC            CTAAGATACAGAATG 100 65
        modA NONE
        modB NONE
        modC 3414241 .. 3414275 -  -7.8  -3.21416   TATTCGCACCAGCAA    CTGGGCGCTGTCGCT GCCGGA AGCG-CAGCGTCCGG     TGTTCACCCAGGTGC  59 433
APT61_RS15900 3412680 .. 3412695 - -10.4  -5.60993   CCGGGCATAAAAAAA              CCTCGC ATTG GCGAGG               TTTTTTTATTTCATC 100 45
APT61_RS15890 NONE
APT61_RS15885 NONE
APT61_RS15880 3407966 .. 3407979 -  -5.3  -3.14309   ATACAGTAAGATATA               CTTGT ATAG ACAAG                TGCGCACAAGGCTGG  52 96
APT61_RS15875 NONE
APT61_RS15870 3404660 .. 3404675 -  -8.2  -5.64006   AGTTAACTAAAAAAA              CCGGCC AATA AGCCGG               TTTTTTTATAGGCCC 100 69
APT61_RS15855 NONE
APT61_RS15850 NONE
APT61_RS15845 NONE
        bioD 3398738 .. 3398754 -  -2.9  -3.47078   GACGGTAGAGGAGAA              TTTGCAC ATT GCGCGAA              TGGCGAAAGGCGTCG  47 392
APT61_RS15830 3395559 .. 3395578 - -16.4  -3.35679   CGCGGGGATTGACAA            GGGGGGCC CGGC GGCCCCCC             TTGTCACGTTCACGG 100 140
        moaA NONE
APT61_RS15815 NONE
        moaC NONE
        moaD NONE
        moaE 3390855 .. 3390871 -  -2.1  -3.09785   TTATAGCCTAACACA              TCCCCGG AAT CCGGCTA              CCAGCGGCTGGCGGC  43 23
APT61_RS15795 3390107 .. 3390118 -  -7.2  -3.14468   GGGCATCACACTTAA                CGGC GGTT GCCG                 AAGATGCGCAGCAGC  60 10
APT61_RS15775 3386110 .. 3386120 -  -2.4  -3.53091   ATCTTCGTCGGCAAA                 GCGG TGC CTGC                 GCTGATTGTCGCCAC  47 417
APT61_RS15745 3379202 .. 3379221 -  -8.5  -5.07652   GGCCGCAAAAGAAAA            GCCCGGC TTTACG ACCGGGC             TTCCAGATTACTGCG  93 33
        dinG 3376636 .. 3376646 -  -5.4   -3.1706   AAGTGACTTCAGGAA                 TGTC GGA GACA                 CGGGCACGTGGAAAG  49 335
APT61_RS15710 3370210 .. 3370220 -  -2.4  -4.25104   CGCCTGGCAGCAAAA                 GCTG AAG CGGC                 TGGCGCGACCGGTTA  59 214
APT61_RS15680 3364378 .. 3364392 -  -5.6  -2.83346   CGAGAAAGCGAAGCA               GGCGCT GAA AGCGGC               GGTGGATGAACTGCT  47 351
        ompX 3357094 .. 3357107 -  -9.5  -6.23317   ACAAAAACAAAAAAA               CCCGC CGAA GCGGG                TTTTTTACTAGCTCA 100 50
APT61_RS15630 NONE
APT61_RS15625 3352495 .. 3352551 -  -9.6  -2.59793   TCAGCCATATAACAG CATCCGTCCTGTTAGTGAACGGCATCA CAAT TTATGCCGTTCACTAA-AGTTAGGACG TTGCTATACATTTGC  66 65
APT61_RS15620 NONE
APT61_RS15615 NONE
APT61_RS15610 NONE
APT61_RS15605 3347046 .. 3347064 - -13.1  -3.35679   CGCGGGGATTGATAA             GGGGGCC GCGGT GGCCCCC             TTATCACGTTCACAG  87 118
APT61_RS15595 3343553 .. 3343587 -   -13  -4.37554   AAAGCGAAATACAAA     CCTGTCATACAACATT TAA ATTGTGGTATGACAGG     ATTTTTAAATGTTAA 100 187
APT61_RS15570 3336230 .. 3336249 - -13.6  -4.07246   GGAGGTTAAAGCAAA            CGGCAACC TGAA GGTTGCCG             TTTTAGTGTTTTCTC 100 82
APT61_RS15555 NONE
APT61_RS15550 NONE
APT61_RS15545 NONE
APT61_RS15540 NONE
APT61_RS15535 3327725 .. 3327751 - -11.1  -2.60079   GCATTTTATAACTCA         CTGAATAGAAA TAGTT TTTCTATTCAG         TTATACAAAAATTGG  72 45
APT61_RS15530 3327195 .. 3327224 - -12.9  -4.15508   AAGTAACGTGTAAAA       TTGCCGGGT-GGCG CTG CGCTTACCCGGCAA       CATGCCTGAATCAGG 100 36
APT61_RS15510 3322047 .. 3322063 -  -9.3  -4.57073   GATCCGGCGGAAAAA              CTGGCGC TCT GCGCCCG              CCTTTCTGCTTGCCT  87 478
APT61_RS15500 3318213 .. 3318223 -  -3.2  -2.87132   TGTTTGCTCTACAGA                 GAGT GCA ACCC                 ACGTGCCAGGAAAAA  43 73
APT61_RS15495 NONE
APT61_RS15490 NONE
APT61_RS15485 NONE
APT61_RS15480 NONE
APT61_RS15475 NONE
APT61_RS15470 3313508 .. 3313524 - -10.1  -5.41143   CAGGCCCGAAAAAAA              GGGGACC TAA AGTCCCC              TTTTTTTATTGCTAT 100 40
        bssR 3311327 .. 3311344 - -12.7  -3.52941   AAAGCTTAACCAGAA             GGGGGAG TTGC CTCCCCC              GGGATCAGCTCTGAA  89 30
APT61_RS15455 3309900 .. 3309922 -    -9  -3.54543   ATCGACGCTGCCAAA           GCGACCTGCG AAT CGCTGTTCGC           CATGATGGACGAGGC  66 229
APT61_RS15445 3307674 .. 3307684 -  -2.4  -3.16191   GGACACCCTCAGCAA                 CCTG TGC CCGG                 ATATCGCCTTTTACT  41 377
APT61_RS15425 3304253 .. 3304263 -  -8.2  -3.53224   GACCGCGTGTTGAAA                 GGGG AAG CCCC                 GTTCAACCAGGGCTA  69 133
APT61_RS15410 3301599 .. 3301616 - -12.7  -3.94276   AAAACAGCGCATAAA             GGCCAGC GCAA GCTGGCC              TGTTTGTTGAGGTTA  93 38
APT61_RS15395 3297977 .. 3297997 -  -2.7  -3.40071   AATTGATATTGAGAA            GTAAATT GCACAAA AATTTAC            ATTTGTAGAGATTTT  47 75
APT61_RS15390 NONE
APT61_RS15385 3295834 .. 3295857 -  -3.8   -3.1372   CACCGCCCACTAAGA          TGATGTCCCA CGCG TGTGCCATCA           GGTTTGTGCCACCAG  48 23
APT61_RS15380 NONE
APT61_RS15375 NONE
APT61_RS15370 3292198 .. 3292212 -  -6.4  -3.53012   GCCGTCCGGGGCAAA               GAAGAC TGC GTCTCC               TTTGGTTTCCTGTAT  61 99
APT61_RS15350 3287772 .. 3287784 -  -5.5  -3.21466   AAGGTATCAATGTAA                CAGGC AGA ACCTG                CTTTCCATTACCGAT  52 379
APT61_RS15340 3286911 .. 3286933 - -14.2  -4.12198   CATAATCCGGTAAAA           GCCTGCGTAT CAT ACACGCAGGC           AGGCACAGGATGAAT 100 45
APT61_RS15335 3285942 .. 3285959 -  -6.3  -4.34482   CCCCTTAAAAAAATA             GT-GCCTG TGC CAGGCGAC             GTGTGCATGGCAGGT  74 44
APT61_RS15330 3285110 .. 3285127 - -11.3  -3.54459   TTAATCCTTCTGAAA             GCGCGTT AACA AACGCGC              CAAAAATGAACACTC  79 338
APT61_RS15325 3283917 .. 3283933 -  -9.4  -3.56594   TCAAACTGGTGCAAA              CGCACC ATCAG GGTGCG              TATCGCCGGGCACGC  71 70
        potG NONE
APT61_RS15315 NONE
APT61_RS15310 3280894 .. 3280915 - -15.9  -2.83403   TGTCTTCCATGAAAC           GATGCCGCG ATAA CGCGGCATC            TCATTTACGCCTTTG 100 56
APT61_RS15305 3280375 .. 3280389 -  -2.1  -3.13784   AACGAAACCTTAATA              CGTCTG GGGG CAG-CG               ATTATACACGTTATT  43 36
        rumB 3279209 .. 3279225 -  -5.7  -3.47573   GCAGGGAGAGCACAA              GCGCAGC GTC GCCGGGC              AGTGGCTTAGCGCTT  59 32
APT61_RS15295 NONE
APT61_RS15290 3276466 .. 3276511 -  -3.3  -5.03314   GTGATCGCCAAAAAA GGCCAGTACACCT-CCTTTGAG CAG CTGAAAGGCAAGCGCATTGGCA TGGAAAACGGCACCA  78 452
APT61_RS15255 NONE
APT61_RS15250 3270879 .. 3270896 -  -8.5  -3.86372   TTAAGCCAAAGACAA             CTACTCA TAAG TGAGTAG              TTTTTTTTAGGTTAT  73 37
APT61_RS15245 3269970 .. 3269995 -  -8.3    -5.626   CAGGGGATAAAAAAA         TCTCCATCGGC GTTA ACCCATGGAGA          TTCGGAGAAGGATGT 100 41
APT61_RS15230 NONE
APT61_RS15225 NONE
APT61_RS15220 NONE
APT61_RS15215 NONE
APT61_RS15210 NONE
APT61_RS15205 NONE
APT61_RS15200 NONE
APT61_RS15195 NONE
APT61_RS15190 NONE
APT61_RS15185 NONE
APT61_RS15180 NONE
APT61_RS15175 3256512 .. 3256530 -  -3.9   -4.0098   TGTGAACTTAAAGAA             CATGTCT TCCAT AAACATG             AATAAAACCAGCATG  60 217
APT61_RS15170 3253707 .. 3253736 - -17.9  -3.92542   TGTACCTTTAAAGAA       CTGACCGCCCTCC GGGA GGAGCGCGGTCAG        TAGTTGCGGGCGATA 100 70
APT61_RS15165 3253052 .. 3253076 - -10.7  -2.62616   CCATCTGTGACATGA          TGCCCTCTCTC CCC GGGAAAGGGCA          AAAACAGGGGTTTTA  72 163
APT61_RS15140 3246974 .. 3247012 -  -8.9  -3.91196   GCCATAGACAGCAAA  CTGTA-GGCCGGGC-ACAC GCA GTGTCGCCCGGCTTTACTG  GCGCAGAGGCGTTAT  76 37
APT61_RS15115 3240335 .. 3240356 -  -4.3  -4.72986   GATCGCCAGCAAAAA           GCG-CGCCGA GTA CCGCCGCCGC           TTTGCCCTGCTGGAC  75 76
APT61_RS15105 NONE
APT61_RS15100 3236112 .. 3236132 -  -8.3  -4.18197   ACCCCTCACTCAAAA            TGCCAGC CCGATAC GCTGGCA            TTTTTATTTGCGGGC  77 135
        clpS NONE
        clpA 3232868 .. 3232883 - -11.8  -5.64274   GCAGCCATAAAAAAA              CCGGGC TTTC GCCCGG               CTTTTATCATCACGC 100 48
APT61_RS15080 3230718 .. 3230735 - -14.1  -3.99878   AGAGAGAATACTAAA             GGCCGGG TTAT CCCGGCC              TTTTTTTATTCAGCA 100 245
APT61_RS15050 3223724 .. 3223752 - -19.7  -2.64155   TGCGTGCTAAACGGA        CAACAGTGCCGGG AGG CCCGACACTGTTG        CTGTATGGATTACCA 100 82
APT61_RS15045 3219371 .. 3219401 -  -6.9  -2.70932   GTTTTCTGTCAACTA      TTCTG-GACCTGCC CGCA GGCAGGCGACAGAA       GAAAATGCTTAATTA  53 76
        lolA 3218677 .. 3218700 -  -2.2  -3.37634   CATTATCTGAAAAAT          CGAGCGACAG GTTG CTCACGCACG           CCTCTTACTTATTAC  45 30
APT61_RS15035 3217297 .. 3217315 - -13.2  -3.89346   AAAAATAGGAGGAAA             TGACCGCA GCC TGCGGTCA             CTGAAGTTTCCCGTC  95 62
APT61_RS15030 3215933 .. 3215946 -  -9.5  -5.64274   CGAGGCATAAAAAAA               GCGCC CGCA GGCGC                TTTTTTACATTTTGG 100 44
APT61_RS15025 NONE
APT61_RS15020 NONE
APT61_RS15015 3211780 .. 3211799 -   -10  -5.43553   ATTGAAAAAAGAAAA            GCCGGGCAC TAA GT-CCCGGC            TTTATATAACAATAA 100 47
APT61_RS15010 3210371 .. 3210387 - -12.3  -5.35354   GACAGAAGCAAAAAA              GCCTGTC GGC GACAGGC              TTTTATTTACTCAGG 100 36
APT61_RS15005 3209734 .. 3209763 - -15.1   -3.1876   AAGGTCATGTATTAA       CAAAACGCCCGGC TTTC ACCGGGCGTTTTA        TTTATTAGTCAAAGA 100 30
APT61_RS14980 3202585 .. 3202603 -  -3.1  -4.36914   CGGGCTGTCACAAAA             CCGACAA AATCG CTGTCAG             GTGATGCGTTTGGCC  62 22
APT61_RS14975 3201313 .. 3201333 - -16.1  -5.29716   TCAACATAATAAAAA            CCCCGCAGC CTG GCCGCGGGG            TAAACAGGGACACAA 100 41
APT61_RS14970 3199968 .. 3199987 -   -15  -2.77256   GTAAGCAAATAAGAT            GCCGCACC GGGC GGTGCGGC             TGGGGGTCATCAGGC  90 35
         cmk 3199078 .. 3199102 -  -8.6  -2.87132   GGGTTGTTTCACATA         CCCGCCGTCAA TCCA TTG-CAGCGGG          GGTACTGCTAAATCG  62 48
        rpsA 3197266 .. 3197283 - -14.1  -3.97051   AAACAGCTTAAACAA             GGGCGGC CGTA GCCGCCC              TTTGTTATTGATTAC 100 82
        ihfB 3196873 .. 3196903 -  -8.5  -5.65496   CAGGAAAAACAAAAA      CA-AAAAAAGCACC CGCA GGTGCTTTCTTGTG       GTTACTCAGTTTCGC 100 54
APT61_RS14950 NONE
APT61_RS14945 NONE
        lpxK NONE
APT61_RS14935 NONE
APT61_RS14930 NONE
APT61_RS14925 3189412 .. 3189433 -  -8.7  -4.77867   ATACAGAAGATAAAA           TATCCCCTC AGCC GAGGGGATG            AGGGGGGATTAACGC  88 34
APT61_RS14920 3188030 .. 3188059 -    -5  -4.07687   ATCCGGGTTCGAAAA       TGATCTTCACCG GGGCGG CGGCGAAAAGCA        ATCCGGTGAGCACCG  62 382
APT61_RS14910 NONE
APT61_RS14905 NONE
APT61_RS14900 NONE
        mukB 3180260 .. 3180277 - -14.1  -5.86332   TCAAGGTAAAAAAAA             GGCGGCC CGAA GGCCGCC              ATGGGTAATTTTAGG 100 46
APT61_RS14890 3178219 .. 3178246 -   -20  -3.93659   AGCAAAACCAGGAAA        TACGGGGCTTGC AGCC GCAAGCCCCGTA         TCTTTTCACCACTTA 100 70
APT61_RS14885 NONE
APT61_RS14880 3176866 .. 3176882 - -12.3  -5.75945   ACCGGGCAAAAAAAA              GCCTGCT TTG AGCAGGC              TTTTTTATTTGTTCG 100 41
        pepN 3168032 .. 3168049 - -11.3  -4.84527   TGCAGAGATTAAAAA             CGGCAAC CGAG GTTGCCG              TTATGCTTTTAGCTT 100 59
APT61_RS14825 3162447 .. 3162476 - -10.1  -4.66537   TCCGGGAATATAAAA       CAACCAGAGCT GGAAATAA AGCCCTGGTTG        TGAGTCATGATAAAA 100 43
APT61_RS14820 3161794 .. 3161810 -    -8  -3.66356   AGCTGGAAGCTTAAA              CAGCCT GCTCG AGGCTG              AAACAGACCGGCTGC  68 4
        rlmL NONE
APT61_RS14805 NONE
APT61_RS14800 NONE
APT61_RS14795 NONE
APT61_RS14790 3153030 .. 3153058 - -19.7   -6.0458   ATAAACCAAAAAAAA        GCCGCAATTAGCG TGA CGCTAACTGCGGC        CTGGTGCGATGAATT 100 45
APT61_RS14775 3149547 .. 3149564 -  -9.8  -5.24129   TCGTCTGACAAAAAA             CCCCGC CATGTT GCGGGG              TTTTTTATTGCCTGA 100 55
APT61_RS14760 3146383 .. 3146393 -  -8.2  -3.31144   GCGCGATGCGCACAA                 CCGC GAT GCGG                 AGCTGGCGTCGGTGG  59 396
        helD 3141897 .. 3141914 -    -7  -4.42464   AACGCCTGAAATAAA             TACCCG CCCTGC CGGGTA              GCGGCTTCGCCTTAC  76 112
APT61_RS14730 3140079 .. 3140102 - -13.2   -4.4959   CGCAACTAACGAAAA          CCCGGT-AGCC GGT GGCTGACCGGG          TTTTTTATTACTTCG 100 33
APT61_RS14715 3137553 .. 3137570 - -14.1   -4.9725   AGTGCTACATAAAAA             GCCCCGC TTAT GCGGGGC              TTTCTTTTTTGGTAA 100 400
APT61_RS14700 3134901 .. 3134945 -  -5.2  -4.56597   CGTTCGCCTGAAAAA TAGTCAAAATG-CGTTTAATC GGTT GAATAGACGACATTCTGACCA TTTTATCAGCACAAA  73 57
APT61_RS14695 3134703 .. 3134740 - -12.1  -5.07011   CAGACAAATCAAAAA   GCAAAAGCCCTGCGATA TTGC TATCGCAGGGCTTTCTA    ATTTGGCGGAAGCGT 100 29
APT61_RS14690 3133413 .. 3133435 -  -4.1  -3.26031   GGCAGCTTAAAGATA          CGCGTAGTGC TGTA GCACTG-GCG           AAGCAACTTGATTTG  47 156
APT61_RS14660 3124260 .. 3124277 - -11.3  -5.32882   CAGTAGCATAAAAAA             GGGACTC TCAC GAGTCCC              TTATCTATTTTACTT 100 298
APT61_RS14620 3114988 .. 3115044 - -16.2  -3.86015   CATTTCTGCTATAAA CCG-CAAAAGCAAAAAACCCTGCGATA TTGC TATCGCAGGGTTTTTCAAATTTGGCGG AAGCGTAGAGATTCG 100 20
APT61_RS14580 3108430 .. 3108459 -    -3  -3.28712   TGGCGCGCTCTACAA      TCCG-CGCTGGCCAT GGC AT-G-CAGCGGCGGA      ACTGGGTGCTCAGGT  45 211
APT61_RS14565 NONE
APT61_RS14560 3104417 .. 3104431 -  -7.8  -4.30014   CGGAGGAATGTAAAA               CAGACC AGG GGCCTG               CACAGCTTCCGCCTA  75 38
APT61_RS14555 3103187 .. 3103204 - -12.7  -3.83568   TCAGAGGCATAACAA             GGCCTGC CGAA GCAGGCC              CCTGAGTTTACTGCA  93 33
APT61_RS14540 NONE
APT61_RS14535 NONE
APT61_RS14530 3095890 .. 3095900 -  -2.4  -3.57144   CGGGCCATGGCGAAA                 GCTG GTG CTGC                 CTTTTACATCACACT  47 34
APT61_RS14515 3093614 .. 3093635 - -11.7  -2.73681   GATTCAGTCGAAGCA           TAAATGCCC TTAC GGGCATTTA            TGCTTTCTACGGGAA  75 46
APT61_RS14500 NONE
APT61_RS14495 NONE
APT61_RS14490 3089101 .. 3089127 -  -6.5  -4.23758   ACCTTAGAGGGAAAA         GGCAACGGC CTGCTCTCT GCCGCCGCC         AGTGCGATAAAAACC  69 196
APT61_RS14475 NONE
APT61_RS14470 NONE
APT61_RS14465 3085309 .. 3085326 -  -5.5  -3.70902   CGTTTGAGACGGAAA             GCGGG TTGCTCGC CCCGC              TCTCCTCTGAATGTG  59 82
APT61_RS14460 3084388 .. 3084399 -  -2.2  -3.14344   TATCCTGTTCATGAA                GCTC TCCT GAAC                 GCCTATTCGATCATC  43 28
APT61_RS14455 3082149 .. 3082159 -  -8.2  -4.52589   CGTTCTGACAGAAAA                 GGGC CGC GCCC                 TGCAAACCGTGCTGC  78 322
APT61_RS14445 3080421 .. 3080443 -  -5.6  -5.63374   TTAACAGGAAAAAAA           GAGCCCAT CTATTCC ATGGACTC           TTTCTCATATGCCTC 100 87
APT61_RS14425 3077874 .. 3077892 - -17.4  -5.77988   ACAGACATAAAAAAA             CCGCCGGG AGG CCCGGCGG             CGGGGGGTGCCAGGG 100 42
APT61_RS14420 3076704 .. 3076726 -  -8.4  -3.36327   CGATCTCAGTCAGAA           CGGCAACC TGATTAT GGTCGCCG           TAACCCTGGTACTGG  64 174
APT61_RS14380 3070330 .. 3070340 -  -4.6   -5.0133   GATCTGCTGAAAAAA                 GCCC AGC AGGC                 GTGGATCGCCCTACG  80 206
APT61_RS14365 3064050 .. 3064065 - -11.8   -5.4505   TTTGGCAAGAAAAAA              GCCGGG CATG CCCGGC               TTAGATTACGAAGGT 100 81
APT61_RS14360 3063260 .. 3063279 - -16.4  -3.35679   CGCGGGGATTGACAA            GGGGGGCC CGGC GGCCCCCC             TTGTCACGTTCACGG 100 183
APT61_RS14350 3060338 .. 3060350 -  -4.7  -3.16881   CACTTACCTGAGTAA                GCGCC TGG GGTGC                CTCAGCCTTGCCGCC  50 81
APT61_RS14345 NONE
APT61_RS14340 3057792 .. 3057816 - -14.4  -3.05962   GGGACATAAAAATAG          GTCCCGCTTA TGGGG TAAGCGGGAC          GGTATTCAGGCTTCG  90 31
APT61_RS14335 3056495 .. 3056518 - -16.8  -4.06419   GCCCCTCACAAACAA          CAAAGCCCGG TTTC CCGGGCTTTG           CATACAGCAACAGAC 100 41
APT61_RS14300 3052261 .. 3052280 - -12.2  -2.80784   GAAAGGGAGGAATGA            GAACCCTC GACT GAGGGTTC             GACAACGGGCGACAG  70 378
        ghrA 3050179 .. 3050194 - -11.8  -4.77036   GTTTATTAGCAAAAA              CCCGGC GATG GCCGGG               TTTGACTCAGTAACC 100 32
APT61_RS14265 NONE
APT61_RS14260 3048791 .. 3048813 -  -5.7  -3.25823   TTGCTGTTACATTAA          GAAG-GTGAT CCAG ATCACTCTTC           GTTCTCTTCCTGCAG  55 17
APT61_RS14255 3048202 .. 3048221 - -13.6  -4.75404   AAAGCGCATTAAAAA            GGCGAGAC CCTG GTCTCGCC             TTATTTATTTGCTTA 100 30
        csgB 3044652 .. 3044671 -  -2.8  -4.00042   TTCGTCATCAAATAA            CTAGCGTT GGAT AACGCGAA             TTGCCATTTGTGACT  56 6
        csgA 3044115 .. 3044130 - -10.4  -6.06723   TCTCCCAAAAAAAAA              CAGGGC CTCA GCCCTG               TTTTATCGTCGTACG 100 50
APT61_RS14220 NONE
APT61_RS14215 NONE
APT61_RS14210 NONE
        mdoG NONE
APT61_RS14195 3035661 .. 3035680 - -12.2  -5.19879   CTCCAAAGATAAAAA            TACCGGCT CGAG AGCCGGTA             TTTATTTGCCCCGCG 100 103
APT61_RS14190 3035130 .. 3035142 -  -6.3  -3.07787   AAGATGACGCGAATA                TTGAG CAG CTCAA                TATTCAGAAATATGT  52 294
APT61_RS14170 3031296 .. 3031333 - -12.7  -2.68072   TTCAGCAGAAGTAAT   GCCCTCGCCCGGTCAGCA TCC TGC-GACCGGGCAAGGTT   TTAGCGTTATTCCGG  81 32
APT61_RS14125 NONE
APT61_RS14120 NONE
APT61_RS14115 3021929 .. 3021945 - -13.7  -4.88918   CTACCTGAAACAAAA              CGCCTGC AGA GCAGGCG              TAATTTCGCCGGGCG 100 129
APT61_RS14110 3020318 .. 3020341 - -16.8  -2.79655   GGACAGACAGAGAAC          GGGGAGTACC GACA GGTACTCCCC           TTTTTTGCTTTAGAT 100 47
APT61_RS14090 NONE
        flgC NONE
        flgD 3017092 .. 3017110 -    -3  -3.04517   ACCGCTTGTGAAAAG             GCCATGAG TTA CTCCTGGT             AAATGTTAGGGCTTA  43 38
        flgE NONE
        flgF NONE
        flgG 3014228 .. 3014260 -   -12  -2.78508   CATCTTCGAAAACAG     GGAG-CCGGTGCGGC GCGA ACCGCACCGGACTAC      ACCTTAGAGTTGCGT  80 29
        flgH NONE
        flgI NONE
        flgJ 3011415 .. 3011432 -  -2.5  -2.62184   TCCTGTTGGAGATTA             TCGGCAG GCCC CAGCCGG              ACTTGAGAACTTTCA  39 38
        flgK NONE
        flgL 3008685 .. 3008710 - -15.5  -6.06723   TTCCTGAAAAAAAAA         GCCCAATCCGC GCAA ACGGATTGGGC          ACAGAACATAACCAG 100 70
APT61_RS14030 3006392 .. 3006409 - -12.7  -4.19238   CGCTTAAGCGCAAAA             GCCGACC TTCG GGTCGGC              TTTTTTATTGCTTCT 100 30
APT61_RS14020 3001276 .. 3001287 -  -2.2  -3.70848   ACACACCGAAGAGAA                TGCC CGCC AGCA                 ACTGCTGAAAGCGCG  51 416
APT61_RS14010 NONE
        rpmF 3000131 .. 3000176 -    -5  -3.57144   GTTTTCACGGGGAAA CCCTCACTAAGCCTAATCACGC AAAC GCGTGATTA--CTTAGTGATAA CCTTGCGGCCGCGGT  55 12
APT61_RS14000 NONE
APT61_RS13995 NONE
APT61_RS13990 NONE
        fabG 2996264 .. 2996277 -  -2.3  -4.25848   AATTTCCTATCAAAA               CTCGC TTTC GCGAT                GGTTTTCGTAGTGTA  57 144
APT61_RS13980 2995970 .. 2995994 - -12.2  -5.86976   CTACAAAAGAAAAAA         CACAGGCGGTC GAAT GACCGCCTG-G          AGATGCTCACTTACG 100 36
APT61_RS13975 2994605 .. 2994621 -  -7.2  -5.52096   AAACCGAATAAAAAA              GGCCCG ACAAG CGGACC              TTTTTTATCAATTTG  93 75
APT61_RS13970 NONE
APT61_RS13965 NONE
APT61_RS13960 NONE
APT61_RS13955 2991054 .. 2991070 -  -3.7  -4.11027   CGACTAAAAACATAA              TGTCTCT CTC AGAGATA              GGATGCAGGCAGCGT  58 17
APT61_RS13950 2990179 .. 2990211 -  -4.1  -4.17132   AAATGTTTCAAGAAA     GCGCTTCACCGCCC CCACAT GGGCGGTGAA-CTT      TACTCGTTTTGGCTA  62 71
APT61_RS13945 2988487 .. 2988504 - -12.7  -5.49234   ACAGGCAATAAAAAA             GGCAGCC ATTC GGCTGCC              TTAGTCTCCCCAGGT 100 47
APT61_RS13935 NONE
APT61_RS13930 NONE
APT61_RS13925 NONE
        thiK NONE
APT61_RS13915 NONE
APT61_RS13910 2981938 .. 2981963 - -16.9  -4.91852   CTTAGCAAAAAGAAA         GCCCGGCTCACG TTA CGTG-GCCGGGC         TTAGGCTGTAATCAG 100 44
APT61_RS13905 2980412 .. 2980436 - -13.6  -4.62302   TAATATGCTGAAAAA         GCCCCTCCAGC GAGT GC-GGAGGGGC          ATGGGTCTTAGTGCA 100 33
APT61_RS13900 2979658 .. 2979684 -  -6.5  -6.13503   TATGAATAAAAAAAA         GCTCCCCAGCC TGAGC GAATGAGGAGC         TAAACGCAGAGAACA 100 48
APT61_RS13890 2978031 .. 2978050 - -13.6  -5.65927   TAGCCAAATAAAAAA            CGCTCTGC AATT GCAGAGCG             TTTTTTTTCGCAGTG 100 65
APT61_RS13870 NONE
        lolD NONE
APT61_RS13860 NONE
APT61_RS13855 NONE
APT61_RS13850 2966659 .. 2966676 -  -3.3  -3.87641   AACAGGTGGCAGAAA             CCATCGG CTAC CCGACGC              CAAACCTGGCCGCCC  55 276
APT61_RS13825 2961306 .. 2961319 -  -3.7  -3.06261   CGTCAACGGCGAACA               GCTGG ATTC CCCGC                ACCGCCCGGCGCTGG  45 271
APT61_RS13780 2952237 .. 2952256 - -11.4  -5.66229   ACTAATAATAAAAAA            CGGGAACC ACCA GGCTCCCG             TTCGCATACAACCCA 100 50
APT61_RS13740 2945029 .. 2945041 -  -6.9  -4.64048   CAGCAGATAAATAAA                CAGGC TTT GCCCG                CTGGGCGGCAAAGGT  77 196
APT61_RS13735 NONE
APT61_RS13730 NONE
APT61_RS13725 NONE
APT61_RS13720 2942732 .. 2942755 -  -8.9  -3.66541   AACAGATATGTCAAA          GTCCGCTCT TCGCTC AAAGCGGAC           TATGGCTATTCCTGC  74 99
APT61_RS13705 2939664 .. 2939677 -  -3.1  -2.80245   GGAGTGTAACAGAAT               TCTGCG AAA CGC-GA               TAACCAGCCCGCTCC  42 272
APT61_RS13700 NONE
APT61_RS13695 NONE
APT61_RS13690 NONE
APT61_RS13685 2937120 .. 2937137 -  -9.1  -4.78848   GCCTGAAATAGAAAA             GGCCACC AAAC GGTGACC              TCAGAAAAGGAAAAA 100 189
APT61_RS13680 NONE
APT61_RS13675 NONE
APT61_RS13670 2935127 .. 2935145 -  -7.3  -3.53091   AGTCTTTCCCTCAAA             CCCCGGG TGCCT CCCGGTG             AACTTACTCCAGTAA  64 525
APT61_RS13665 2934285 .. 2934296 -    -3  -3.88114   AATACTAAATAAATA                TGAA ATGT TTCA                 CTTAAGTTAATTTAA  54 218
APT61_RS13660 2933412 .. 2933426 -  -5.8  -4.28994   GAGGACCCATCAAAA               TGATAA TGA TTATCA               CTTTAATTTATTAAG  69 87
APT61_RS13655 NONE
APT61_RS13650 NONE
APT61_RS13645 NONE
APT61_RS13640 NONE
APT61_RS13635 2926967 .. 2926978 -  -7.2  -6.06529   CAGATATAAAAAAAA                GCCC TGTC GGGC                 CGGTTCATTTTCGGG 100 44
APT61_RS13630 NONE
APT61_RS13625 NONE
APT61_RS13620 NONE
APT61_RS13615 NONE
APT61_RS13610 2924597 .. 2924618 -  -9.3  -4.74132   AGACTCCACTAAAAA           TGACGGGGC CAGC GCCCCGCCG            GTCAGGAAACGGTGA 100 27
APT61_RS13605 NONE
APT61_RS13600 NONE
APT61_RS13595 2921350 .. 2921361 -  -3.6  -3.04322   GGGAATTTCTCAATA                GGCA TTAG CGCC                 TCCCGTTGTTCAGAT  45 18
APT61_RS13590 NONE
APT61_RS13585 NONE
APT61_RS13580 NONE
APT61_RS13575 2919063 .. 2919078 -  -8.2  -5.93252   CTCAAAAATAAAAAA              CCCCGC CGGA GCGAGG               TAGTAAAAACATTTC 100 47
APT61_RS13570 2918414 .. 2918429 -  -6.8  -5.60993   GCGCCCATAAAAAAA              GCCACC CTGA GGTGAC               CTGAATGAAAGGATT 100 45
APT61_RS13565 NONE
APT61_RS13560 2913979 .. 2913994 - -10.4  -5.24129   TTGCTCCATAAAAAA              CCCAGC CTGA GCTGGG               TTCTGTAATTCGGAT 100 57
APT61_RS13555 NONE
APT61_RS13550 NONE
APT61_RS13545 2910842 .. 2910866 - -15.9  -2.87931   CTGATGTTGCATATA          GTTGCTCTGTT TCA AACAGAGCAAC          GGTGCTGCTACAGAA 100 371
APT61_RS13515 NONE
APT61_RS13510 NONE
APT61_RS13505 2900983 .. 2900995 -  -3.3  -2.71011   ATCGGGTTGCAACGA                CCACC TGC GGTGT                CATCGCTCCTGGAAT  42 25
APT61_RS13500 2890525 .. 2890563 -  -3.6  -2.79183   TGCATTTCCACCAGA   CGGCGTAGCAACGTCAGA GAA CCTGTCATGGCATCGCCA   GCCCTTGCGAGGTGA  43 12
APT61_RS13495 2887741 .. 2887760 - -13.6  -5.60993   GTGCCCATAAAAAAA            CGGAAGCC TGTT GGCTTCCG             TTTTAGTCTAACCCG 100 128
APT61_RS13490 2887128 .. 2887160 -  -4.9  -3.02144   TTATCTTTCTCAACA      CTGAATAGTTGAGCA AAT CACTCAGGTATTCAG      TACGACATTGCTCAC  49 299
APT61_RS13485 2886654 .. 2886673 - -10.7  -4.72386   TAAACGATGCAAAAA            GACCGCC ACTGTA GGCGGTC             TTTTTGTCTGAAGCG 100 46
APT61_RS13475 2884621 .. 2884638 -  -5.5  -2.53715   TGCATCAGGATGAAG             GACGGCGC ATT GC-CCGCC             TTGCAGACGAACAGA  45 122
APT61_RS13465 2883080 .. 2883108 -  -2.9   -3.7108   ATGGTTACAGCGAAA        CCGAAGCCGGTTC CCT GCACGGGCTGCTG        CAGCTGGCAACCGCC  52 457
APT61_RS13455 2880985 .. 2880998 -  -5.3  -3.55444   GTGCCAGGGCGTAAA               GTAAG CAGG CTTAC                TTTTTTTATTTTGGC  56 483
APT61_RS13445 2879752 .. 2879772 -  -6.1  -3.21747   TGACGTCATTATTAA            GCCAGTTAA CCC CTGACTGGC            TTATTGTCTTTAATC  55 35
APT61_RS13440 2877458 .. 2877488 - -13.2  -3.20616   ACCAGCAACAGTTAA       CTCCACCGCCGGTC ACT GACCGGCGGTGTTA       CGTTAGCCTCAGAAG  88 34
APT61_RS13425 2872835 .. 2872849 -  -8.5  -5.79595   CGTGAAAAGAAAAAA               CCCGC ACATG GCGGG               CTTTAATCGATTCTC 100 107
APT61_RS13420 2871411 .. 2871425 -  -2.9  -2.74488   TAATGAGCCCAACGA               TAACT CTTCC AGTTA               ATCACTGCAGGGCTA  41 57
APT61_RS13415 2870370 .. 2870391 - -13.1  -3.58905   ATTTCTGATAGATAA           GGCACAGTA ACTC TACTGTGCC            TGTATAGTTATGACA  89 43
APT61_RS13410 NONE
APT61_RS13405 NONE
APT61_RS13400 2868682 .. 2868696 -  -7.1  -5.55769   TGCGACAATAAAAAA               GACGC TTTCG GCGTC               TGTTATCGCCTTTGA 100 165
APT61_RS13395 NONE
APT61_RS13390 NONE
APT61_RS13385 NONE
APT61_RS13380 NONE
APT61_RS13375 2864789 .. 2864801 -  -3.4  -2.91065   ACTACACACATGAGA                GAGT TACTT ACTC                TGGCTAGCACCCCTC  43 29
APT61_RS13370 2863802 .. 2863825 -  -7.4  -3.66178   CCCGGCAAGGTTAAA          GCGC-GGCC CACCGGC GGCCAGCGC          TTTCAGGTAGGACGT  67 367
APT61_RS13365 2862677 .. 2862693 -  -9.4  -2.67143   ACACGCATCATATCA              GGGGTG TTTTG CACCCC              CTATGCAATTTTTTT  63 45
APT61_RS13360 2862060 .. 2862075 - -10.4  -6.02345   TAAGCACAAAAAAAA              GCCACC TACT GGTGGC               CTTGTAGAATATAAA 100 44
APT61_RS13355 NONE
APT61_RS13350 NONE
APT61_RS13345 2857993 .. 2858006 -  -5.9  -2.89564   TCCTCAGTTGATAGA               GCCAC CAGC GCGGC                GCTGTGCGTTGCTGG  52 55
APT61_RS13340 2857607 .. 2857640 -  -3.2  -3.34894   AATTGGTTTTAAATA     GTGCGCAGCCATAAT GCGCG ATT-TCGCTGCGTAC     CTTACTGCGTACCAG  48 27
APT61_RS13335 2857074 .. 2857087 -  -9.5  -5.58179   GATGACAATAAAAAA               CCGCC CGTA GGCGG                TATAGACTATACAGA 100 32
APT61_RS13330 2856128 .. 2856138 -  -2.4  -3.30629   TAACAATCCATAACA                 GGCG TTG CGCA                 CTAACAATTACTAAC  45 454
APT61_RS13320 2854528 .. 2854540 -  -3.3  -3.54475   TCCCTGATGACAGAA                TACCG CTG CGGGA                TGATGGACAAAACCA  49 85
APT61_RS13305 2844751 .. 2844793 -  -7.9  -3.74693   CTGTACCTTATCAAA TC-GGTCAGCACATTCATAC ATAT GCAAAAATATGCTGACCTGA TATTAGGATTAAACG  68 116
APT61_RS13300 2844227 .. 2844241 -  -7.1  -5.77853   AATGTGTAAAAAAAA               CCTGC GGTTA GCAGG               CTATAAAGTTTTTTA 100 115
APT61_RS13295 2842676 .. 2842693 - -12.7  -4.67048   CCACCCTAAAACAAA             CGGAGCG CAAG CGCTCCG              TTATGATGCATAAAA 100 441
APT61_RS13290 2841718 .. 2841730 -  -6.3  -3.00946   GTCTGGGACAAACTA                TTCAC ATC GTGAA                GCGTTAATCCCCTGC  55 79
APT61_RS13275 NONE
APT61_RS13270 2838653 .. 2838670 -  -9.9  -5.80817   TCGAAGATAAAAAAA             CGGTAAC CTGG GTTACCG              TTTTTTTTACCTCAA 100 61
APT61_RS13250 2834151 .. 2834167 -  -2.9  -2.64099   TCCTTTCATTACAAT              TGCACTA TGG TAGCGCT              CATTCCATTAAGTGA  41 103
APT61_RS13245 NONE
APT61_RS13240 2831143 .. 2831170 - -13.4  -2.84171   AGGGCGAAAAACTCA        GGCCGGGTGAGCG TCG CGC-CACCCGGCG        AATTTTCAGGCCGTA  85 31
APT61_RS13230 2829005 .. 2829035 -  -7.6  -2.87931   TGGAGGCGGGAGAGA      CGCAGCCCGACGC CCTGGT ACGT-GAGCTGCG       CGAAGAGCTGGGCAT  56 238
APT61_RS13220 NONE
APT61_RS13215 2827520 .. 2827542 -  -3.2  -4.57073   GATGGGCTGGAAAAA           TGTCGGCGTC TAT GACGGCGGCT           GGTACGAATGGAGCA  69 88
APT61_RS13180 NONE
APT61_RS13175 NONE
        astD NONE
APT61_RS13165 NONE
APT61_RS13160 2814892 .. 2814921 -   -13  -4.77173   GGCTGAGAAAATAAA       CAACCCCATC-GC ATTAA GCTGATGGGGTTG       GAGGAGTGTCAGGTG 100 34
APT61_RS13155 2814033 .. 2814083 -  -9.2  -5.86976   GCAGAAAAGAAAAAA CCGCCGGA--CCTGTCCACAGCAAA TATG CTTGG-GTGAACAGGACTCCGGCGG TCTTGAATGGCTGAA 100 45
APT61_RS13150 2812856 .. 2812904 -  -5.2  -3.54424   GGGCAGCGCTGCAAA CCCTGCAGACCCTGGCCGA-C-GA GCG TCAGCTCTGCTATGGCCTGCTGGG ACTGGAGTCGTTAAG  55 370
APT61_RS13135 2810863 .. 2810878 - -11.8  -5.47821   AGCGACGTAAAAAAA              CCGGCC AGGT GGCCGG               TTTGTCGCTTTGCTC 100 54
APT61_RS13130 2810251 .. 2810269 - -13.2  -2.73903   AAAATGCCCTTAAAT             GCCGCAAT AAT ATTGCGGC             GTAAGTGTGTGTGAA  84 74
APT61_RS13125 NONE
APT61_RS13120 NONE
APT61_RS13115 2807527 .. 2807539 -  -7.7  -2.52623   TCTTTTGCATAATAT                TCTCC CTG GGAGA                TCCGCCATTAGAGTA  57 111
APT61_RS13110 NONE
APT61_RS13105 2805320 .. 2805347 - -13.4  -5.40474   ACCGGCGTAAAAAAA        GCCGGGTGGCGGC TTC GCCTC-ACCCGGC        CTGGTGTATTTTTTC 100 74
APT61_RS13095 2802567 .. 2802588 - -14.5  -5.75342   CCCTGCTAAAAAAAA           CCGCCTTCA GTGA TGAAGGCGG            TTTTTTATTATCTGT 100 40
APT61_RS13070 2798045 .. 2798082 - -11.2  -2.57132   TGCTGGCGGCATAAG   GTGCAGACTGCCGGGC TACATT GCCCGGCGGCGTACAC    TTATAACAGGCCGAG  72 26
APT61_RS13050 2794685 .. 2794707 -   -15   -5.2197   CACAAAAATTAAAAA           CGGGTCAATA TAT TATTGACCCG           CTGCGATTACATTTT 100 32
APT61_RS13045 2794199 .. 2794237 -  -3.3  -3.88137   ATAACTGCCGATAAA  TGAATGTATCGTGTTTGA TAAA TCAATCAAGAC-CATTCA   CCGGCGACCAGTTTA  55 13
        thrS 2791381 .. 2791424 -  -2.2  -2.63382   TCTCAGACTCACAAT CCCCAGCTGTTCGCCTTCCA GACC TGTTAAGCGAACTTCCTGGG CGCGAATCTCGCCAT  39 90
APT61_RS13035 2790900 .. 2790925 - -13.3  -4.65916   CCCAGGCGAACAAAA         CCTGCGAAGCC TGTC GGCTCCACAGG          AATTGCTACTTGAAG 100 43
APT61_RS13030 NONE
        rplT 2790211 .. 2790229 - -10.3  -4.54727   CTGTTGAAACGAAAA             GAGGGAG ACTAG CTCCCTC             TTTCAACTGGCTTAT 100 37
APT61_RS13020 NONE
        pheT NONE
        ihfA 2786236 .. 2786251 - -11.8  -5.64421   AGCGCAAAGAAAAAA              GGCCGC ATAA GCGGCC               TTTTTGGTTAGATCA 100 43
APT61_RS13005 NONE
        btuE NONE
APT61_RS12995 2783764 .. 2783774 -    -4  -3.89837   CATAAGGAGAAAACA                 GAAT CGC ATTC                 CTGACGAATCCTCTG  57 95
APT61_RS12990 2783283 .. 2783304 - -15.9  -2.84218   TACGGATGAAAAGAG           TGTCGCGCC GGGC GGCGCGACA            GGATTAAATGCGTCG 100 29
APT61_RS12985 2782299 .. 2782318 -    -2   -3.1489   TTAAACACCAGGCAA            GAAAAGGG TTAT CCCTGTAC             CAGGGTGGTAATGCG  43 14
APT61_RS12980 2780422 .. 2780441 -  -4.8  -3.01712   GGCCGGTCGTCAATA            CGCGGCCC TGTC GGGCGGAG             AACAACAACGTGTGC  46 387
APT61_RS12935 2769892 .. 2769913 - -12.3  -5.63236   AGGGAAAAATAAAAA           GGCGAGAAC CTAA GTCCTCGCC            TTTTTGTATTGCAGA 100 50
APT61_RS12920 2765050 .. 2765060 -  -3.2   -2.6039   AGATCATCCCATAAT                 CTCC AGC AGAG                 CCTGCAGTGGATGGC  42 3
APT61_RS12915 2764608 .. 2764623 - -11.8  -5.48213   GATGGAAAACAAAAA              GGCCGC TTTC GCGGCC               TTAGTTTTTACACGA 100 33
        sufA NONE
APT61_RS12905 NONE
        sufC NONE
APT61_RS12895 NONE
APT61_RS12890 NONE
APT61_RS12885 2758335 .. 2758361 - -15.2  -4.72486   CAGAAAGCTGAAAAA         TCCACGAGGCGG GAA CCACCTCGTGAA         ACAGAATGATAGCTG 100 51
APT61_RS12880 2757233 .. 2757251 - -14.6  -4.63218   CCTGTGTTAATAAAA             TGGCGCAC ATT GTGCGCCA             TTTTTTTTTGCCCGC 100 50
APT61_RS12865 NONE
APT61_RS12860 NONE
APT61_RS12855 2752088 .. 2752116 - -15.3  -5.36441   GTCTTATACAAAAAA        GAAGCCCGGCGAG AAA CTCACCGGGCTTT        TTAAAAGCAGAATCA 100 46
APT61_RS12850 2751807 .. 2751830 -  -9.6  -4.11371   GAACAGCTGGCAAAA          CGCTGA-CGGT TTA ACCGGCCAGCG          CTTTCACCACGGTTT  81 12
APT61_RS12845 NONE
APT61_RS12840 2749136 .. 2749146 -  -3.2  -4.46233   GTAAGTGGAAACAAA                 GGCA GCG TACC                 GAAGCGCGCGATGAA  63 64
APT61_RS12835 2748559 .. 2748581 - -13.4  -4.19258   AGATCTGATGTAAAA           CGCCCCGG ACGATTG CCGGGGCG           TTGAGTTCCAGGCCC 100 69
APT61_RS12830 2747412 .. 2747422 -    -4  -2.75229   GAAAACCTTCAATGA                 TATG TTG CATA                 GCAATGTCTCATTTT  45 68
APT61_RS12825 2746329 .. 2746339 -  -8.2   -2.7439   AGCCAGGACAAACAC                 GCGG CCC CCGC                 CATCGTCAACCCACA  54 472
APT61_RS12790 NONE
APT61_RS12785 2738194 .. 2738213 - -12.2   -2.6063   TGGATGGAGAAGTGA            GCCGCAAT AAAT ATTGCGGC             GGATTTAACACACGT  78 75
APT61_RS12780 NONE
APT61_RS12775 NONE
APT61_RS12770 2734259 .. 2734295 -    -5  -4.14243   GAGGCGATGGCAAAA   GCCG-CAGTGCAACCCGC CTC GCGCGT-GCGCAGACGGC   TGCCCTTTACGGCAG  64 32
APT61_RS12760 NONE
APT61_RS12755 NONE
APT61_RS12750 2728511 .. 2728523 -  -3.3  -3.53091   AGCCGGTTGCGTAAA                CAGGG TTC CCCCA                CGCCAGGCGGCGCGG  50 68
APT61_RS12745 2727535 .. 2727555 -  -5.4  -3.18274   TCGAGTCCAATTGAA            CGCACCAT TCTCT ACAGTGCG            TCCGTAGCTCAGTTG  51 161
APT61_RS12725 2725042 .. 2725071 - -15.1  -3.53012   GGGTGGCTCGCTAAA       CAAAACACCCCGG CAAG CCGGGGTGTTTTT        TATTACGCGTCGTTG 100 28
APT61_RS12710 2720874 .. 2720886 - -10.5  -3.06796   CGTTATCTCATCGAA                CGCGG TCA CCGCG                AAATCGGCGTGATCC  66 510
APT61_RS12700 2718602 .. 2718624 - -17.8  -4.99043   GCGGCATAAACAAAA           CGCCGAAGGA AAC TCCTTCGGCG           TTATTTTTTTACTCG 100 34
APT61_RS12685 2716363 .. 2716378 - -10.4  -5.64274   CGACGCATAAAAAAA              GCGACC TTCT GGTCGC               TTTTTATTTACCTGG 100 50
APT61_RS12650 NONE
APT61_RS12645 2709743 .. 2709761 - -13.8  -3.04263   ATCCCAGCTGGAACA             GGCGCCCG CTC CGGGCACC             TTAAGCGATCAGATA  79 34
APT61_RS12625 2706018 .. 2706035 - -11.3  -5.27335   TTCGGTAAAGAAAAA             GCCTTGC ATCA GCAAGGC              TTTTTTAAAGGTTAG 100 37
        anmK NONE
APT61_RS12605 2702121 .. 2702146 -  -5.3  -2.63382   GCTGACATTGACAAT         GGGTGAGGC TATTGTGC GCCCCCCCC          TGCAAAATCTCAACG  48 35
APT61_RS12600 2701395 .. 2701419 -   -10  -4.42974   GGTACATAGAATAAA          GCGCTGACAC CCGTT GTACCAGCGC          TTAAAAGAACAAATT  85 48
APT61_RS12595 2700002 .. 2700031 - -12.1  -5.06103   ACAACCCTGAAAAAA       TAAAGGGGCGTGG TTTC CCACGCCCCTGTG        CTTTTATGATTACTT 100 35
APT61_RS12590 2698792 .. 2698806 -  -2.1  -3.52073   CCCGGAAGAGTACAA              GC-CGA CCGT TCGTGC               TCTGCTGGAGAAAAA  47 336
APT61_RS12525 2687236 .. 2687252 - -15.1  -5.18726   CGCGGATAAGAAAAA              GCCCGGC AGT GCCGGGC              TTTACTTTTTTAAGC 100 35
APT61_RS12470 NONE
APT61_RS12465 2676371 .. 2676395 -  -3.5  -3.96148   TTTTTGCATCAGAAA         GCCGTTGGTG TTGCTG CACCG-CGGC          TTTCGCCTTTTTGGA  55 49
APT61_RS12460 NONE
APT61_RS12455 NONE
APT61_RS12450 2674388 .. 2674399 -  -4.4  -3.05384   TTGTTGCTCATTGAA                TCAC TCAT GTGA                 TGCTCCTCGGTGCGT  47 14
APT61_RS12445 2674000 .. 2674019 - -10.7  -4.62783   GATTGATTGCAAAAA            CAGCGGC AACAAG GCCGCTG             TTAAGTCTGCTGTCC 100 159
APT61_RS12435 2672948 .. 2672958 -    -4   -3.9461   TTTTGTTAACAACAA                 TCAT ATG ATGA                 CGGTAAACATTATTG  57 287
APT61_RS12430 NONE
APT61_RS12425 NONE
APT61_RS12420 NONE
APT61_RS12415 NONE
APT61_RS12410 NONE
APT61_RS12405 NONE
APT61_RS12400 2669547 .. 2669570 - -12.4  -4.17701   TCCAGAAACGACAAA          GCCCCACGGT GTTA ACCGCAGGGC           TTGAAACGAAGGCAG  95 124
APT61_RS12390 NONE
APT61_RS12385 NONE
APT61_RS12380 NONE
APT61_RS12375 2666921 .. 2666935 -  -4.2  -3.47322   CTTGATGATAACGAA               GCGG CGGTATT CCGC               AATAATTTTTGTTAC  52 186
APT61_RS12370 2665749 .. 2665784 -  -9.8  -3.57161   AAAGATTAATGATAA    TTGCCATTACGATGAG ACTA CCCATGGTGATGGCAA     TAAAAGACCCCATTG  74 81
APT61_RS12360 NONE
APT61_RS12355 NONE
APT61_RS12350 NONE
APT61_RS12345 2660281 .. 2660294 -  -3.7  -3.59979   TGGCGGCAGGTTAAA               GCGGG TAAT CACGC                CCTGAGCAGCGCCAG  50 195
APT61_RS12340 NONE
APT61_RS12335 2657567 .. 2657580 -  -9.5  -4.44667   CTCCTGAATAACAAA               GGGGC CGAA GCCCC                ACTGGGTTAACCCAT  85 32
APT61_RS12330 NONE
APT61_RS12325 NONE
APT61_RS12320 NONE
APT61_RS12315 NONE
APT61_RS12310 2655428 .. 2655443 - -11.8  -5.68438   TGAGGAAATAAAAAA              CCCGCC GGAT GGCGGG               TCAGTAATCAGCGCG 100 26
APT61_RS12305 2654441 .. 2654456 - -11.8    -5.252   GACGCGCATAAAAAA              GCCCGG CGAG CCGGGC               CAGAGTGGTTAGCTG 100 34
APT61_RS12300 2654077 .. 2654090 -  -9.5  -5.13354   CTTAGAAAAAAGAAA               CCCGC CGGA GCGGG                TTAAGTAATCGAGCG 100 53
APT61_RS12295 2653699 .. 2653719 -  -2.4  -2.57132   CCCGGCGTGTACAAC            GCTGCGGC GACCT GCCTCAGT            TTTTTTCTCGTACAC  39 21
APT61_RS12290 NONE
APT61_RS12285 NONE
APT61_RS12280 2649742 .. 2649755 -  -5.2  -3.90112   TGGGCTGTAATGAAA               GCCC TGGGCG GGGC                TTGGCATCAAAAGAT  61 49
APT61_RS12270 NONE
APT61_RS12265 NONE
APT61_RS12260 NONE
APT61_RS12255 2646384 .. 2646399 - -10.4  -5.64274   GCATCCATAAAAAAA              GCACCC GATT GGGTGC               TAATTGAAGAGTAAG 100 47
APT61_RS12250 2643415 .. 2643428 -  -5.9  -3.16217   GACGAAGAGTTAACA               CCCAG TGAA CCGGG                AGACTGCACCCACGG  55 389
APT61_RS12245 NONE
APT61_RS12240 NONE
APT61_RS12235 2637926 .. 2637942 -  -6.5  -4.62904   AAACATTTTCAAAAA              CACCTGA AGA CCAGGCG              CACATTGAAAAAATA  77 390
APT61_RS12230 NONE
APT61_RS12225 2636638 .. 2636669 -  -8.8  -2.74741   AGCAGACCTTAAGCA      TTTTAGGGAAGACC CTAA GGTCTTCCTTACAA       TTACATTCAGGTGCA  61 50
APT61_RS12220 2635165 .. 2635188 -  -7.4  -3.12351   GCTTTTTACATCGAA          GGCCG-CCTTG CAC CAAGGGCGGAC          GGAGTTATCATTAAT  60 191
APT61_RS12205 2630709 .. 2630737 - -17.7  -2.80016   CCGCAGCAGTAATGA        TAAAAAACCCCTC TTC GAGGGGTTTTTTA        TTGCCGCCAGCCAGA 100 72
APT61_RS12190 NONE
        fumC 2624279 .. 2624297 -  -6.6  -4.34402   TGCCGGACAGCAAAA             GCAGGTGC AGT ACGCCTGC             CCGACGCCGTTGATT  72 191
APT61_RS12150 2617838 .. 2617864 -  -2.2  -4.56597   GCGCCTGGTGAAAAA         GAGGTGATCGAC TTA ATCGACTACATC         CTGACCAGCTGTTAC  66 85
        pntA NONE
        pntB 2611138 .. 2611153 - -11.8  -4.64846   GCATAAATGAGAAAA              CCGCCC AGGT GGGCGG               TTTTTTTTATCGTGC 100 52
APT61_RS12120 2609925 .. 2609943 - -17.4  -5.28683   ATTAACAGTAAAAAA             GCCCGCCG TAA CGGCGGGC             TTTTTTTTAGCTCTC 100 32
APT61_RS12085 2601721 .. 2601737 -  -2.3  -2.71204   AAAAGTATAATCAAT              TCAGTTA ATT TAATTGA              TAATTCATTCGCTCT  39 253
APT61_RS12080 NONE
APT61_RS12075 NONE
APT61_RS12065 2598278 .. 2598297 -  -2.8  -2.53164   CCAGGCACCATGAAC            CCACTCAA ACTG TTGCATGG             TTCGCCTCCTTACGC  40 10
APT61_RS12060 2597927 .. 2597967 -  -2.6  -2.76093   AAGCGTAATACACGA GTTGGATTTCGCTGCCTGT AATG ACAGGCAGCAAGATT-ATC  AGGCCAGTTTTATCA  42 24
APT61_RS12055 2595585 .. 2595597 -  -4.7  -4.62069   CGCTGATGTTAAAAA                CCGCC GAT GGCTG                GCAGGTTATCGGGGT  72 145
APT61_RS12030 NONE
APT61_RS12025 2588834 .. 2588863 -  -5.8  -2.55253   AGGAAGTCTAAGGCA       TGCGCTATCC GCTCAGTTTG AGATAGCGCA        ATTTTTAGTAAGACT  50 51
APT61_RS12020 2588001 .. 2588025 - -11.4  -2.90496   TGGTCTGTGAAATGA          CCGGGCAGTA TCTGC TCCTGCCCGG          CTTGCTGATTGCCTG  76 69
APT61_RS11950 2575125 .. 2575154 -  -5.7  -2.64616   CGCTGAGCCAGATGA       TCGTGATGCTGTGG AAG CC-CGGCATGACGA       TAGATTTCGCCGTCA  46 255
APT61_RS11940 2572580 .. 2572605 - -13.4  -4.09864   AGCCATTCTGTAAAA         CGTCCGCTTT TCGCTC AAAGCGGACG          AGTATGAAGTTGGGA 100 316
APT61_RS11930 2570616 .. 2570629 -  -3.1    -3.695   CTCAAAGAGCGCAAA               GCAAC GTTA ATTGC                GGCTTTTGATTTTGA  51 224
APT61_RS11925 2569761 .. 2569773 -  -3.3  -3.28924   CATTCTCTGCGACAA                CAGCG CCC CCCTG                ACGTCCGCTTTGTGC  48 159
APT61_RS11920 2568558 .. 2568571 -  -3.9  -3.72909   TTAATGAAGACAGAA               TGAAT CCGG ATTCA                TTTTTACAGCATAGG  55 29
APT61_RS11915 NONE
APT61_RS11910 2565682 .. 2565695 -  -8.1  -5.99154   CATGAAATAAAAAAA               CACGC CGAA GCGTG                TTTTTCAGGTTAATT 100 100
        hmsH 2562986 .. 2562998 -  -4.1  -3.29461   GAAGCGCCCTTAGAA                CCTGA CAT TCAGA                TCAAATGCGAGGGCA  50 7
        pgaB NONE
APT61_RS11895 NONE
APT61_RS11890 2558706 .. 2558726 -  -2.5  -3.84246   TTCTGAACCATGAAA            TGGCGGA TCAGTAT TCAGCCA            TTACCGCACCGGCAC  53 489
APT61_RS11880 NONE
APT61_RS11875 2555847 .. 2555867 -  -8.3  -3.28791   ACGCGCTTTTTAGAA            TGGCTGGAT GAC ATACAGCCA            TGCACGCATCAGTCC  66 129
APT61_RS11870 NONE
APT61_RS11865 2554253 .. 2554264 -  -4.4  -2.98823   TTTCGCCCAGAGATA                GCTA TGAA TAGC                 GTTCAGTAGGAGGCT  47 87
APT61_RS11860 2553274 .. 2553286 -  -7.7  -2.88514   TACAGATAATATAAT                CTGAC GAT GTCAG                CAAGCCAGTTTAGAT  59 269
APT61_RS11850 2551386 .. 2551397 -  -4.4  -3.17219   CAGAAGGGTTACTAA                CTGA TACT TCAG                 AGTTAAATCATAATA  48 466
APT61_RS11845 2550783 .. 2550812 - -19.5  -4.56775   ACTTTCTGTTAAAAA       TGGAAAAACCGCC GAAA GGCGGTTTTTCCA        TTGGGGAGAATTAAT 100 72
APT61_RS11825 2547572 .. 2547589 -  -3.5  -4.25104   GCCCGGCTATCAAAA             GCTTAATG CTG CAT-AAGC             GCCAGTGTTTTTGCC  60 10
APT61_RS11810 2543273 .. 2543289 -  -5.1  -3.30338   ATAAGTGCTCTACAA              CAGGCTT CAT AAGCTTG              TTAAGTTAGCCGCAG  54 487
APT61_RS11800 NONE
APT61_RS11795 NONE
APT61_RS11790 NONE
APT61_RS11785 NONE
APT61_RS11780 NONE
APT61_RS11775 2537542 .. 2537556 - -11.4  -3.52481   AAACAGGCGATACAA               CGCCTG ACG CAGGCG               CTGCCAGCGGGTGGG  83 43
APT61_RS11770 NONE
APT61_RS11765 2532013 .. 2532048 -   -14  -2.90723   GTACCGTTAACGAGA    TGCCTGGCT-GCTCACC CCT GGTGGGCAAGCCAGGCT    CTCCAGCCACCAAAC  88 1
APT61_RS11735 2526040 .. 2526074 -  -2.1  -3.86015   GATGCGCGGGATAAA    TGCCAGCAGAGCGCCA ACGT CAACGC-CTACTGGGA     GCCGAACACCCTGCG  53 120
APT61_RS11725 2525318 .. 2525337 -  -8.5  -2.72471   GCTGGATCACACAAT            GAGGCGC TTACGC GCGCCCC             CAGCCTGCCACGATA  61 13
APT61_RS11720 NONE
APT61_RS11715 2522946 .. 2522956 -  -2.4   -3.0976   CTCAACAGGGTAAGA                 TGCG TAC CGCT                 AAACCGCATTCATAG  43 44
APT61_RS11710 2521508 .. 2521533 - -15.5  -5.65177   AGAGGGATAAAAAAA         GACTCCCCTGC ATCG GCAGGAGAGTC          ATCAGATATCAGGAG 100 34
APT61_RS11705 2519631 .. 2519657 -  -3.1  -4.28375   GCAACACAGGCAAAA        TCAGCGCCATTCA CGG CGAA-GG-GCTGA        GTGCCGCACAATTAC  64 165
APT61_RS11695 2518816 .. 2518848 -  -8.4   -2.8499   AGCGAAGAGTAATGA     TTGC-GCATCCCGAC CCGG GTCGGGATGCAGCGC      GTTATTATCGTACGA  62 30
APT61_RS11680 2515049 .. 2515065 - -11.5  -5.31275   TTTGAGTACAAAAAA              CCGGGCA TTG CGCCCGG              CTTTGCTTCCAGCCT 100 50
APT61_RS11670 2512602 .. 2512612 -  -2.4  -5.24531   ATTTGTCACAAAAAA                 CGGG TTA CACG                 TTTTTTACAGATGAA  76 131
APT61_RS11665 2511979 .. 2511989 -  -2.4  -3.76586   CGCTAAACATAAATA                 GGTG TGG CTCC                 GTTAAATCAGCCCTT  50 32
APT61_RS11650 NONE
APT61_RS11645 2509150 .. 2509166 - -13.7  -6.09133   CATGGCAAAAAAAAA              CCGCCAG AGA CTGGCGG              TAAATGCTTGCATGG 100 130
APT61_RS11640 2507825 .. 2507861 - -10.2  -2.65298   GGGACGGATCAGAAT    GGCACAGCGTTGCACT TTATT AATGCAACGCTGTGGA    TAAGCAATTACCAGA  69 33
APT61_RS11635 NONE
APT61_RS11630 NONE
APT61_RS11625 NONE
APT61_RS11620 NONE
APT61_RS11615 2502157 .. 2502194 -  -5.7  -3.01924   TATGTCCTGCCAAGA   TAACGTCC-TCACTCCAT TTT AAAGAGTGATGGATGTTA   TAATATAACATAACG  53 54
APT61_RS11610 2501467 .. 2501494 - -14.2  -3.21872   CCTAAAGATATTGAA        GCCGGGTA-AGGC ATA GCCTCCACCCGGC        TTACAGGCAGCGCCA  90 44
APT61_RS11605 NONE
APT61_RS11600 NONE
APT61_RS11595 2499890 .. 2499925 - -21.3  -3.53012   TCGTGTCGCCTGAAA    GCAGTGCCCGGC-AGC GCTAA GCTTGCCGGGCACTGC    CGATAAGCAAAGAAG 100 57
APT61_RS11585 2497250 .. 2497299 - -10.7  -3.62597   CCCACCTGGCAACAA TTTGAACATGGACAGCGCGCAAC AACC GGAGTGCACTGCCCATGTACAAA ATGGCAAATAAAACA  81 327
APT61_RS11565 2495399 .. 2495411 -  -6.9  -2.73875   CGCCCTGGAAGAGCA                GCCGC AGC ACGGC                TAACGCGGTGACCGG  53 68
APT61_RS11555 NONE
APT61_RS11550 2492392 .. 2492413 - -12.3  -3.85698   CCTGCTGGGGAGAAA           CTCCACCCC CGAG GAGGTGGAG            TGGCTGAAGCACAAT  83 49
APT61_RS11510 NONE
        pdxA NONE
APT61_RS11500 2482744 .. 2482761 -  -6.9  -4.67904   GACGAACTGCAAAAA             TTCCGCC ATTC GGCGGAG              GTGATCAAAGCCAAT  79 62
APT61_RS11490 2481152 .. 2481172 -  -3.1  -4.07568   GCCGCTGGCCGAAAA            CTGGCGCTG GCT CACCACCTG            GCTGGTGTGGCGCCG  58 70
APT61_RS11480 2478830 .. 2478883 - -17.4  -3.01924   CAGCGGGGCGGAACA CCCGGCGGCGCTGCACATGAGCCTG TGGGT CAGGC-CAGGCGCAGCGTCACCCGG CAAACACGCGGGTGA 100 45
APT61_RS11475 2477127 .. 2477147 -  -3.2  -2.62545   CACAGGCCAAAAACG            GCCTGCGA GTATA TCAGAGGC            TTATGGATGACGTCA  42 38
APT61_RS11470 2476001 .. 2476015 -  -3.6  -3.38812   GCCGCTGGAAGAAGA               TGACAT GCA ATATCA               ATCCATAGGGTTGCT  48 180
APT61_RS11465 2474387 .. 2474403 -  -2.1  -2.91395   ATGCGTTTGATAAAC              CGACTGC CAG GCACGCG              AGGGGATTTACTGAG  40 177
APT61_RS11460 NONE
APT61_RS11455 2472297 .. 2472307 -  -3.2  -3.14132   TCTCCTTTTTATCAA                 TGGC ATC ACCA                 TGCACTTTACATTTT  46 60
APT61_RS11450 NONE
APT61_RS11445 2470125 .. 2470165 -  -6.2  -4.50058   GAGGGATAACGAAAA TCGTTTG-GCCGGGTAAACG CAG CGCC-ACCCGGCACAAACAG GGATAACCTAACGGA  75 41
APT61_RS11440 2468993 .. 2469017 - -15.8  -3.46107   AAACAAGAAAAATGA          GCATCAGGCG AAATG CGCCTGATGC          ATGCCGCGCTTAGGT 100 35
APT61_RS11435 NONE
APT61_RS11430 NONE
APT61_RS11425 2465632 .. 2465655 -  -8.9  -2.90075   CCGCGCGCAATGACA          CTCTCCCTC ACAAAA GAGGGAGAA           AAATCAGACCACCGG  65 29
APT61_RS11420 2464013 .. 2464029 -  -6.5  -2.82635   ATGCCTATTACGATA              TCCTGAC CGA GGCAGGA              TGCGAGGTGGACATC  49 266
APT61_RS11405 2461930 .. 2461949 -  -3.6  -3.53091   AGTCCTTTTGTTAAA            CACGCATTC ATT GAA-GCGTA            GCTTATGCGGCGGTG  50 72
APT61_RS11400 NONE
APT61_RS11395 2461230 .. 2461257 -  -8.4  -5.82316   ACGATGCAAAAAAAA        CCGGCAAGGATAC AAA GC-CCCCTGCCGG        TTGGTTGGTCCAGTG 100 45
APT61_RS11390 NONE
APT61_RS11385 NONE
APT61_RS11380 NONE
APT61_RS11375 2459215 .. 2459229 - -12.8  -3.27476   ATTTCGAACGATTAA               GGGGGC CAG GCCCCC               TGAGCATTACAGTGC  87 32
APT61_RS11370 2458164 .. 2458194 -    -6  -4.43681   CAGTTAATACGAAAA       CGACCGGCAAGCCG TAG CAGACTGCCAGTCT       GCATAGATTTAAAAT  72 34
APT61_RS11360 2455603 .. 2455619 -  -6.5  -2.52464   GCTCGTCGCAAGTCA              CGGGTTT ATC AACCCCG              ACATCGGCGTGATTG  48 324
APT61_RS11340 NONE
APT61_RS11335 2451092 .. 2451123 - -17.4  -3.54935   TAAATTCCCGGTAAA      GCAAAACGGGTGGC AAAG GCCACCCGTTTTGT       TGCCGTCAGCGACGG 100 31
APT61_RS11305 2440263 .. 2440276 -  -3.9  -4.47158   ACAACATACAATAAA               CTTAT CCGA ATAAG                ACACCTCAACATCGT  65 145
APT61_RS11300 2439436 .. 2439466 -  -2.4  -3.72363   TAGGCAAATCCCAAA       TGCGCCCGCCATCC TCA GGATTGAGGAGACA       TTAATGCCGGAACCG  50 26
APT61_RS11295 2437640 .. 2437652 -  -5.5  -3.58726   TCCGCGCATACACAA                GAGAC GTG GCCTC                TGCATCTGCAACATC  55 320
APT61_RS11285 2436587 .. 2436599 -  -2.7  -3.06183   TCTATTCGGAGGCAA                GTCAA TTT TTAAC                GGTGAGTGCTACTCG  43 72
APT61_RS11280 2434834 .. 2434844 -  -6.8  -2.72344   CGTGATCGCTAATCA                 GGGT GAC ACCC                 GGGTATTTCAGGTCA  51 377
APT61_RS11260 2431896 .. 2431908 -  -9.1  -3.33696   GCTGCTGTTAATCAA                CCCCT ACG AGGGG                TCGGTGCCGTTCCGA  64 185
APT61_RS11230 2421110 .. 2421122 -  -4.7  -4.25104   CTGGCCCGATTAAAA                CCCCG GGT CTGGG                AGAGCTGGTGCCGGA  64 203
APT61_RS11220 2419434 .. 2419447 -  -3.7  -3.69621   ATCCAGAAGGCCAAA               GCCGG ATGT CCGGT                TTCACAGGTGCTGAA  54 100
APT61_RS11210 2418384 .. 2418401 -  -6.9  -2.73067   TTTAAGGATATATCA             CGGCTTC CAGC GACGCCG              GTCTGTATATTTCTC  53 5
APT61_RS11205 2417985 .. 2418003 -  -3.8   -3.9377   ATAAGGCGAACGAAA             TGTAACCC CTA AGGTTGCA             GATCCAGCATAGCAG  57 45
APT61_RS11200 2417762 .. 2417784 - -15.6  -5.38958   ACGTACAAATAAAAA           CACCACCGGC AAT GCCGATGGTG           TCGGGGATCCTGTAG 100 46
APT61_RS11195 2415804 .. 2415821 - -14.1  -2.61264   GCGGGGATTGACAAG             GGGGGCC CGGC GGCCCCC              TTGTCACGTTCACGG  88 136
APT61_RS11180 2411460 .. 2411490 -   -14  -4.87291   CAGCCGAAGTAAAAA       GATGCCCGGCGG CGGCTAC CCGCCGGGCATT       TTCCTACAGCTGCGC 100 29
        adhP 2409428 .. 2409438 -  -2.4  -2.77791   GCGAATGGAAGAGGA                 GCTG GCG CGGC                 ATACGATCCTTGACC  39 156
APT61_RS11160 2407600 .. 2407617 - -14.1  -6.09888   TGGCAATAAAAAAAA             CCGCGCC GGGG GGCGCGG              TAAGCAAACGCTAGA 100 36
APT61_RS11155 NONE
APT61_RS11150 NONE
APT61_RS11145 2404061 .. 2404074 -  -4.5  -2.64695   TTCAACAGATAATAC               GGTCA TGGG CGACC                TCCGCTTAACTGACG  46 14
APT61_RS11140 NONE
APT61_RS11135 NONE
APT61_RS11130 2400342 .. 2400362 - -12.5  -3.14132   GTTGCCCTGGATTAA            CGGCTCCCG TCC CGGGAGCCT            TGTACAGGCTTACGG  82 35
APT61_RS11125 NONE
APT61_RS11120 2398903 .. 2398939 -  -8.8  -2.74144   GCGCTAGCCTGAAAG   TGCAATGCCGGGTGA-CG CTG CGCTCACCCGGCAG-ACA   AACTCCCGTTCCATC  61 61
APT61_RS11110 2396574 .. 2396584 -  -6.8  -2.95942   GTTATATTGAAAGCA                 CGAC CGG GTCG                 CCTGGTAATACAGGT  55 137
APT61_RS11085 2390666 .. 2390688 - -19.2  -2.79831   GTAATTGTTATCAGA           CCACCAGCCG AAG CGGCTGGTGG           TTTTCGCTACTCCTT 100 56
APT61_RS11055 NONE
APT61_RS11050 NONE
APT61_RS11045 NONE
APT61_RS11040 2381428 .. 2381442 -  -5.6  -3.53012   GTGGGTGTTGTTAAA               CGGGCA TTT CGCCCA               AATAAATCTGTGCAA  56 6
APT61_RS11035 NONE
APT61_RS11030 NONE
APT61_RS11025 2378450 .. 2378461 -  -7.2  -5.76949   CAGCGGTAAAAAAAA                CGCC CGGC GGCG                 CGGTATACTCCCTTT 100 78
APT61_RS11015 2376230 .. 2376246 -  -5.9  -3.02511   TGGATCCGCTTAATA              TGTTACA AAG CGTAACA              GTTAAGAGACGCTGA  53 44
APT61_RS11010 NONE
        narZ NONE
        narH NONE
APT61_RS10995 NONE
        narI 2367867 .. 2367893 - -13.7  -3.04398   TGGCGGGGTGAAAAC        GCCGGGC-GACG CATG CGCCTGCCCGGC         TGGGTGGGGCGGTTT  86 85
APT61_RS10985 NONE
APT61_RS10980 2367173 .. 2367198 -  -6.7  -5.07652   GGCGGGAAAATAAAA         CGGGAAGGGGC GTAA GCCCCTCTCTG          TTAGCCGATCAAAAC  87 26
APT61_RS10955 2361766 .. 2361779 -  -2.3  -3.15427   AAGATCGTGCATCAA               TTGGC CTAT GCCAG                AGCCGGACGCAACGT  41 311
APT61_RS10935 2357065 .. 2357081 -  -7.9  -3.07233   TTATAAGGCGTAAGA              GCCGGTT TTA ACCCGGC              GGGCTGCGATCTATC  60 223
APT61_RS10925 2355500 .. 2355517 -  -2.7  -3.57144   CCGCTTACTTTCAAA             GGGTA CTGGTATT TACCC              GCTTGCCAATATCTT  49 3
APT61_RS10815 NONE
APT61_RS10810 NONE
APT61_RS10805 2330781 .. 2330807 - -11.6  -3.53012   GTGCCTGCGCGCAAA         CCGCGATGAC CCACATC GCCATCGCGG         AGGCGGTGGACGGCA  74 65
APT61_RS10795 2329294 .. 2329322 -  -7.3  -3.53012   TGGCTGCTGGCGAAA        GCGCCATGGATTG TAC CGATCCCCGGCAC        CACAAAATTGCACCG  60 178
APT61_RS10785 2326642 .. 2326659 - -11.3  -5.43414   AGCACATATAAAAAA             CGGTCAC CTGA GTGACCG              TTTTGTTTTTTATCT 100 35
APT61_RS10775 2325174 .. 2325190 -  -3.5  -4.86731   TCCCGGCAAAGAAAA              TCGCCGC GTC GCGGTGC              ACTCAGCTTATTCCT  73 300
APT61_RS10765 2320942 .. 2320959 -  -7.7  -3.30124   CTTTACCCTGTACAA             GCAGGCA GAAA TGCCTAC              CCTGTGCGCGCTGAT  59 324
APT61_RS10745 NONE
APT61_RS10740 2317395 .. 2317413 -  -2.3   -4.1043   GGCAAACACTATAAA             GAGGAGC AGGAA GCCCGTC             AGGAGAGCCTGACCA  59 63
APT61_RS10725 NONE
APT61_RS10720 NONE
APT61_RS10715 2308676 .. 2308697 - -10.1  -4.12532   CCTGTCAGAGAGAAA           CGACCCGCA TTGA TACGGGCCG            GTATTCCAGGCCTGA  85 68
APT61_RS10705 NONE
APT61_RS10700 2306599 .. 2306631 -  -7.1  -3.48807   GGATCAAAGCCAGAA     TGCGGC-CCTGA AAATGGCCAA TCAGGTGCCGCA      GACGGTGTTGGAACT  60 63
APT61_RS10660 2296210 .. 2296235 - -15.5  -2.73124   GTTCAGGTGCGAAAC         GTCTCGCGTAG CCCC CCACGCGAGAC          CGCTATTTACGCGTC  95 32
APT61_RS10655 2295264 .. 2295284 -  -7.5  -3.64703   CCTGCCGGATGTAAA            CGGAAAGCG CCA CGCTCTACG            TTATCAATAAAAGTT  67 327
APT61_RS10650 2294839 .. 2294858 -  -9.2  -3.48671   ATGAGGAAATATGAA            GACGGGGC AAAA GGCCCGTC             ATGTTATTGGGTTTT  71 29
APT61_RS10645 NONE
APT61_RS10640 2291832 .. 2291847 -  -4.6  -2.75074   GCGATGTTAATACCA              GCCCCT TCAA AGGCGC               GAAAAGGTCTTCTCA  47 406
APT61_RS10635 2290715 .. 2290727 -  -4.8  -4.08945   ACGATCTGCTGAAAA                CGCT GCCGA AGCG                CAAAAGCAGCTAATT  62 39
APT61_RS10620 2286575 .. 2286587 -  -3.3  -3.30443   GCAGCATTACAGTAA                CGTGC AAT GGACG                CTGCCAACGGTAACG  45 350
APT61_RS10610 2284890 .. 2284907 -  -9.1  -2.78463   AGGTTGTTGATGATA             TGGCGGC CGAT GCCACCA              TGTTTGATGTTCATA  58 95
APT61_RS10595 2280985 .. 2281013 -  -3.3  -4.66833   GTTCAAGTTCAAAAA        CTAGTTCAAAAAA CTG TTTCTTAAACTAT        AGCGTAATGAGCAAA  69 197
APT61_RS10590 2279985 .. 2279998 -  -2.4  -3.28791   AGTTTTTCCTCATAA               TTCC GGTTAG GGAA                CAAATACTCATGGTT  45 71
APT61_RS10585 NONE
APT61_RS10580 2278507 .. 2278525 -  -4.6  -3.46647   TGTAGGCATTAAACA             TTCACC GATTAAA GGTGAA             TTATTTTCATCTGCA  55 266
APT61_RS10560 2273928 .. 2273938 -  -5.4  -2.78216   CATCCTGAGCAATCA                 GATG CTG CATC                 AGCGCGGTTACGCCA  47 370
APT61_RS10535 2268728 .. 2268764 -  -2.8   -4.1466   ATTTAAGCTTGAAAA    CCGCTTTATGCGCGCC CGCAT GGCGCTGTTTAAACGG    GTGATGAAGCACCAC  60 42
APT61_RS10520 2264669 .. 2264687 - -11.7  -5.33026   TAATGGAAACAAAAA             GCCCGTC ATCAA GACGGGC             ATAGAGGAAGTGTGA 100 41
APT61_RS10515 2262016 .. 2262035 -   -15  -6.10295   TGAACACAAAAAAAA            CCGGCCAC TGAT GTGGCCGG             TTCAGTGATTACTGC 100 34
APT61_RS10470 NONE
APT61_RS10465 2254171 .. 2254187 -  -2.3  -3.43288   TAAATTTCACTACAA              CATGA GCCATCT TCATG              ATCGAAGAACCGATC  45 39
APT61_RS10460 NONE
APT61_RS10455 2251773 .. 2251786 -  -3.1  -5.08169   ATATAGCTTAAAAAA               CAGACG TAA CGTC-G               ATATAAACTTAAGTG  74 226
APT61_RS10450 2250510 .. 2250539 -  -9.4   -2.5571   AGCGAACAATAAAGT       GGGCGAGACAATA AAAAA TACTG-CTCGCCC       TGAAATAGTCTTTTC  63 58
APT61_RS10440 2248127 .. 2248141 -  -2.9  -4.11805   ACTACACCAGAGAAA               GAAAA GGTGA TTTTC               AGTGCCGATAGCCCC  60 482
APT61_RS10430 NONE
APT61_RS10425 NONE
APT61_RS10415 2243680 .. 2243692 -  -3.3   -3.2534   ATCAGCATAACGTAA                CGTCC TGA GGAGG                GGGGCTGTCTGAATC  46 208
APT61_RS10385 2238461 .. 2238471 -  -6.8  -3.04944   AAGAAGAAAAGATGA                 GGCA TAA TGCC                 TGCGGCGCGGTATCA  55 38
APT61_RS10380 NONE
APT61_RS10375 2237586 .. 2237605 - -12.2  -3.55761   TAGTCAGTCGTTAAA            CGGTACCT TTGC AGGTACCG             TTGTCAGGGTTATTT  86 35
APT61_RS10370 2236880 .. 2236899 -  -3.4   -2.9302   CCCAATGATAATAAC            GCTGCCTG TCAT CATGCTGC             TCCGGTGAGGGTGGT  45 17
APT61_RS10365 2235549 .. 2235560 -  -4.4  -3.48438   AATTACCACAAGCAA                TCAG TTTA CTGA                 AGGTTCGACTTATTC  52 277
APT61_RS10360 NONE
APT61_RS10355 2232692 .. 2232727 - -15.5  -2.52676   CAGCGCGTTAATTCA    GGGGATGCCCGCTTC GTGACA GAAGCGGACATCCCA     CGTCCAGTTAATAGT  95 93
APT61_RS10345 2231083 .. 2231095 -  -4.9   -3.4398   CCCTAACGCAAAAAC                CTTTT ATG AAAAG                CACGGCTTTGTGTTT  51 294
APT61_RS10335 2229965 .. 2229987 -    -7  -3.80855   TCCGTGAAAAATTAA           CTAAACAGGA ACG TCCGGTTCAG           TCATTCACGGAAAAC  69 26
APT61_RS10330 NONE
        dsbG 2227117 .. 2227153 - -16.7  -4.68593   GTGAGCAGGTAAAAA    GTGCAAAACAGCAGCTG ATA CAGCTGCTGTTTTGCTA    TAGGTTAACGCGGTT 100 40
APT61_RS10305 2222647 .. 2222680 - -12.6  -4.40963   AGTGGGTAAAAAGAA     TAAAACAGCAGCAG TTGGGG CTGCTGCTGTTTTG      AAACGCGTTACACAT 100 73
APT61_RS10285 2218164 .. 2218175 -  -5.8  -3.34043   TGTACTATGCCAGAA                GCGA TCCT TCGC                 GCTATTCGCGCCATG  57 93
APT61_RS10280 2215772 .. 2215789 -  -2.7  -4.35524   CGGTGAAAGGGAAAA             GCAT-GCC GGA GGCTATAC             CCGCGACGACGGGTA  62 370
APT61_RS10270 2214133 .. 2214146 -  -5.3  -3.08508   TAGCGGTGAAAAGGA               CGTTT TATT AAACG                ATATATCCCCGTTTG  51 398
APT61_RS10235 2207324 .. 2207336 -  -6.2  -2.79135   ACAACTCTTAATAAG                CCCG CCCGC CGGG                AACCCGCCTAACGGC  52 33
APT61_RS10230 2206766 .. 2206783 -  -5.5  -2.71364   CTACCCCGTTAATGA             TGCGGTA TTTT TACCGCC              CTCGCTGTCTCAACT  48 86
APT61_RS10225 2206445 .. 2206465 - -11.1  -5.36441   TGCGGACATAAAAAA            GCCCGGC GGGGAAG GCCGGGC            GAACAACAAACCACA 100 68
APT61_RS10210 2203350 .. 2203369 -  -3.5  -3.40403   GTGCTTCCATGATAA            CGCTCCC TTTCTG GAAAGCG             TTTGTTATACCAGCG  48 104
APT61_RS10205 2202382 .. 2202407 - -14.1  -2.58544   TTGTATTTTTATAAG         CCGGGTAA-GGC ATC GCCGTTACCCGG         TAATACAGATTTAAA  88 36
APT61_RS10200 2201461 .. 2201490 -  -6.3  -4.77165   GTCGTCATAATAAAA       TCGCACCGGGC GAAAAAGT GTCCGGTGCGT        ATAGATCATGACGGT  80 40
APT61_RS10195 2200527 .. 2200547 -   -14  -5.84432   CATAAGACAAAAAAA            CCGGGCCA GTTAT TGGCCCGG            TATAATTAGATCATG 100 45
APT61_RS10180 2196327 .. 2196356 -  -8.5   -2.8474   TGTGAGGGATAAGTA       TGATGGCGGCCAGC GAC GCTGGCCGCC-TGG       GGATCACAGTTCGTT  62 29
APT61_RS10175 NONE
APT61_RS10170 NONE
APT61_RS10165 2192046 .. 2192060 -  -2.7  -2.66316   GGGGTGAGGACATCA               GGCCG CACAT CGCCC               GGCGTTTACGATGCC  41 31
APT61_RS10160 2191239 .. 2191255 -  -7.9  -3.24924   GGGCGAGGGAGAACA              CCGGACC CTG GGTCGGG              CAAGCGTAGCGCCGC  62 51
APT61_RS10150 2186115 .. 2186138 - -14.6  -5.75538   GCTAAAAAACAAAAA          CCCTCCCACC GGGC GGTGAGAGGG           CGAAATCTTATGCCG 100 33
APT61_RS10120 NONE
APT61_RS10115 NONE
APT61_RS10110 NONE
APT61_RS10105 NONE
APT61_RS10100 2175220 .. 2175234 -  -2.1  -3.12999   GGATTGCATAGCTAA              TC-GCC TCCG GGCTGA               TAGTGCAGCTCCGCC  43 7
APT61_RS10095 NONE
APT61_RS10090 2170296 .. 2170311 -  -5.4  -2.62184   TCGCTGGCGATACCA              GAAGGT GTGA ACCCTC               TCAGACAAGAGGGTT  48 58
APT61_RS10020 2156104 .. 2156130 - -16.7  -2.58249   CAGATGTGCCAGAAG         CCGGGTAACGT GCGCG ACGTTACCCGG         AGGGAGAGGGATCAG 100 37
        tynA 2153532 .. 2153551 - -16.4  -3.35679   CGCGGGGATTGACAA            GGGGGGCC CGGC GGCCCCCC             TTGTCACGTTCACGG 100 172
APT61_RS10005 2149767 .. 2149787 -  -7.6   -2.9704   ATAAAGACGTAGAGA           CGCTGC-TG AAAT CACGCAGCG            ATCTGTTCTGAGGCT  60 365
APT61_RS09985 2146419 .. 2146437 -  -6.8  -3.90744   CCCCGCTCGAAATAA             CTATAAGC GTA ACTTATAG             TTTTAGGGTGGCGAC  66 28
APT61_RS09980 NONE
APT61_RS09975 2144357 .. 2144371 -  -7.1  -2.77899   GGCCTGCAGCAATGA               GCCTG TTCAG CAGGC               CACCGCCGCGCACGT  51 219
APT61_RS09965 2140480 .. 2140496 - -10.8  -5.12068   TATAGCCAATAAAAA              GCCCGG ACATG CCGGGC              TGTAATAGGTTATTC 100 35
APT61_RS09960 2138965 .. 2138990 - -13.3  -2.66976   TAAGAATATAAAATG         TTAGCCCGCGT CGTA ACGCGGGCTAT          TTTCATCAGAACTGA  84 31
APT61_RS09955 2138447 .. 2138457 -  -8.2  -3.05384   GTCGCCTGTATTGAA                 GGCG TTT CGCC                 GTTTGATTTCCCGGA  57 174
APT61_RS09940 2135674 .. 2135686 -  -4.7  -3.05844   CTGCGCACCGGAAGA                GGCGC AGC GCGCT                AACATTCTGGCGGAA  47 388
APT61_RS09920 2130027 .. 2130045 - -12.4  -3.02385   AAATGGAATGACAGA             TGGCGGCA TCA CGCCGCCA             GCACTTTATTACGAC  81 15
APT61_RS09915 2128979 .. 2128992 -  -2.3  -4.57837   ACATTTGGCCAAAAA               TCGGC TGAA GCAGA                AATTAGGGAGTTCAC  66 457
APT61_RS09785 2095034 .. 2095065 - -17.4  -4.57073   GACCTCTCCTAAAAA      CGAAACTGGCGCGA TTCT TCGCGCCAGTTTCT       CTTTCAGTCGCTGAA 100 224
APT61_RS09775 2092370 .. 2092384 -    -7  -3.14132   CTCGCGTGCCATTAA               TGCGGC TTT GCCGCT               GGCGGGCGAGGTACA  54 116
         tpx 2090878 .. 2090893 - -10.4  -5.95286   AGTAAAAACAAAAAA              GCCTCC GCAG GGAGGC               TTTCTTTTTGGTCTT 100 39
APT61_RS09745 2085143 .. 2085163 -  -2.6  -5.03715   ACGATCTTGAAAAAA           CA-GGCTAT GCTG ACAGCCGTG            TTGAAACGGAAACCG  77 451
        pspF 2069974 .. 2069992 -  -4.5  -3.29043   AATGTCTGCGGATAA             GTGCTGA TATTG TCAGCGC             ATTTGATGCTTTTTG  52 19
APT61_RS09660 NONE
APT61_RS09655 NONE
APT61_RS09650 NONE
APT61_RS09645 NONE
APT61_RS09640 2064546 .. 2064562 -  -4.4   -3.4072   CATCTGTTAGGACAA             CCGTCGT TAAA ACG-CGG              CGATAATAGCATGTG  50 81
APT61_RS09635 2063649 .. 2063688 -   -10  -3.89903   AAACAGCGGGAGAAA  CCCGACAGACAGGTGCTGC CGG GCA-CACCTTCCCGCCGGA  GCGGGAAGGGCACGA  79 43
APT61_RS09630 NONE
APT61_RS09625 2060450 .. 2060478 - -15.4  -5.49234   AGAGGTAATAAAAAA       GTCGGAC-CACCC GGTG GGGTGAGTCCGAC        TTTTTCGCAGCGAAC 100 43
APT61_RS09620 2057995 .. 2058028 -  -2.3  -4.16943   CGTTACAGCCTAAAA     TGAACGGCGTCAGAGC CAT GCTGCG-CGCCCGTCA     GCGGGTCATGCAGTT  59 179
APT61_RS09610 2056889 .. 2056899 -  -8.2  -4.56914   GTATCCAAATTAAAA                 CGGC GCA GCCG                 TTAGTTGAAAACTGA  83 67
APT61_RS09605 2056087 .. 2056104 - -10.5  -3.16288   GAAAGGGCAGTAACA             CGCCCGA CGAA CCGGGCG              CAGGGAGGGGGATCA  73 38
APT61_RS09600 2055539 .. 2055564 - -17.7  -5.00196   CGCTAAACAATAAAA         TAAGCCACGGC CGGA GCCGTGGCTTA          ATATTCTTATATTTT 100 98
        ribA 2051055 .. 2051080 - -11.9   -2.7186   AAAGCGCGTTAATCA         GCCCGGC-ACAC AGG GTGTTACCGGGC         TGTTATTGTTACTCG  75 34
APT61_RS09550 2042890 .. 2042909 -   -15  -5.27335   TGCTGTAAATAAAAA            CGCGAGGC CAGT GCCTCGCG             TTTTGCATCAGTCGA 100 33
APT61_RS09540 NONE
APT61_RS09535 2040211 .. 2040235 - -12.9  -5.43866   CAACGGCTAAAAAAA          CAAAACCCGGC ATT GCCGGGTTTTT          TCTTAATAGTCGATA 100 28
APT61_RS09505 NONE
APT61_RS09500 NONE
APT61_RS09495 NONE
APT61_RS09490 NONE
APT61_RS09485 2029248 .. 2029286 -  -9.4  -2.58272   GACAGGATCAATTTA   TGCGGAACGCCGTCTGGC AAA ACCAGACGGCGGTTCGGT   TATTGTGGACGGGTC  63 25
APT61_RS09480 NONE
APT61_RS09475 2027664 .. 2027682 - -11.7  -5.24129   GGGGGGGATAAAAAA             GGGTGGC CTGTC GCCACCC             GGTCATTATTTCTGG 100 31
APT61_RS09470 2027231 .. 2027244 -  -9.5  -5.08824   TTCTGACGTAAAAAA               GGCCC CGAA GGGCC                TTTTTTATTTATCTA 100 34
APT61_RS09460 NONE
APT61_RS09455 2024878 .. 2024904 - -10.8   -2.6675   CAGCTTATAACGAAG         TGGCCAGCGC GGGATGT GCGCTGGCCG         GTGGATCAATGCTTA  72 31
APT61_RS09450 2024418 .. 2024447 - -12.3  -4.70772   ACAGATGGAATAAAA       TAAAAAAGCCTCC AGAT GGAGGCTTTTTTT        CGGCCTGAATGTCAG 100 37
APT61_RS09440 2023132 .. 2023149 - -11.3   -5.5112   TGCACTAACAAAAAA             GGCTCCT TGTA AGGAGCC              TTTTTTTATCCTAGA 100 36
         cls NONE
APT61_RS09425 2020232 .. 2020261 - -16.7  -3.20348   GTGATTAACATGTAA       TAAAAAAGGCTGC ATTC GCAGCCTTTTTTA        TTCGCGGCAGATGTT 100 39
APT61_RS09390 2010016 .. 2010029 -  -9.5  -5.77988   ACAGACATAAAAAAA               CCCGC CAAG GCGGG                TTTTTTATTTAGCGA 100 45
APT61_RS09380 2008348 .. 2008364 -  -9.4  -5.29782   TACAGGCATAAAAAA              TCCCGC ATTAA GCGGGA              TTTTTCGGACAACTG 100 47
APT61_RS09360 2004477 .. 2004505 -  -5.3  -3.04398   GTGTTTGCTGAAAAG       GTGTCGTCAGGC CTTATT GCCCG-CAACAC        TTTTTAAATTTTTTA  51 10
APT61_RS09355 2003599 .. 2003613 -  -2.9  -2.93572   ATTCATTTTATAAAG               GATTA AAGAA TAATC               GTTCTGTTACCGTAG  43 13
APT61_RS09350 2003308 .. 2003323 -  -2.6  -3.28924   CACCCTTCCCGATAA              GT-GCAA ACT TTGCTAC              ATCTCATCGGTGTTA  47 62
APT61_RS09345 NONE
APT61_RS09340 NONE
APT61_RS09335 NONE
APT61_RS09330 NONE
APT61_RS09325 2002220 .. 2002235 -  -5.4  -2.99717   AGGTAGATAACTATA              TCCAGGC GAT GCC-GGA              GTGCATAGAAAGTGA  48 325
APT61_RS09315 2000517 .. 2000533 -  -2.2  -3.18582   CACTGGATGTATGAA              TCCTTC CTGCC GATGGA              CGTAAAACAGAAGAT  44 449
APT61_RS09285 NONE
APT61_RS09280 1989668 .. 1989711 -  -2.5   -4.1891   GTGGTGGAAGATAAA GCC-GGGC-AGCGTG-TCTCTT CCA ATGAGATCACGCTGGCTCTGAC GCAGCCGCTACTGGC  59 89
APT61_RS09240 1976870 .. 1976890 -  -3.1  -3.61398   GTGTTGTTGTAAGAA            GCCTATCGG CAT CGGGCAGGC            AAACTTGATGCTGGA  49 81
APT61_RS09235 1975060 .. 1975074 -  -7.8  -2.95073   GGGTTAACATTAAAT               GCGGAA ATG TCCCGC               GGTTTCAGCCAGCTC  60 5
APT61_RS09230 1974563 .. 1974591 - -15.4  -5.00616   CTTTGCCTGAAAAAA       CGCCCGGTA-GCT TTAC AGCATACCGGGCG        ATCTCGCCTCAGGCG 100 34
APT61_RS09215 1972001 .. 1972019 - -14.6  -4.73108   CCCATAAAAGCAAAA             CGGCAACC TGA GGTTGCCG             TTTTTTTTGTGTTCT 100 75
        lolB NONE
APT61_RS09175 1964913 .. 1964929 -  -6.5  -3.03159   GCAACGTCTGGAACA              GGGTGAC GTT GTCACCG              AAACTCAGGTTGCGC  55 20
APT61_RS09170 1963821 .. 1963834 -  -9.5  -5.76633   CCACAGACAAAAAAA               CCCGC CGTA GCGGG                TTTTCAGACTGCGTC 100 44
APT61_RS09165 1961726 .. 1961741 -  -3.2   -4.4078   TTTGCGGAATCAAAA              CTCGCC ATCT GGCAAA               ACTACCTCTCACCGG  64 340
APT61_RS09150 1959758 .. 1959768 -  -8.2  -5.00616   GTGCGGGGCAAAAAA                 GGCG CCG CGCC                 CCGGTTATTGCGCTT  88 30
        ychF 1958513 .. 1958530 - -11.3  -5.86061   TTTTATCAAAAAAAA             TCCACGC ATCG GCGTGGA              TTTTTTTCAGGTGGC 100 47
        lacI 1953599 .. 1953612 -  -2.3  -4.12188   CGACGACCGGTAAAA               CCCCT GCCC AGTGG                TTGTTGAAGGCCCGC  59 251
APT61_RS09120 1952033 .. 1952046 -  -2.3  -4.08216   TTATTTCCCGTAAAA               CGGTA GATA TTCCG                GCGCTGTTCGATCCC  56 304
APT61_RS09110 NONE
APT61_RS09105 1947765 .. 1947780 -  -3.3  -3.27662   CTAAATATACCAATA              TGTCT ACGTGA AGACA               TCTTTGCTCCGGGCG  48 55
APT61_RS09100 NONE
APT61_RS09095 1946290 .. 1946315 -  -3.9  -3.04792   GTATTACGCTGAAGA         CGCCGCGCT GGTCGTAA AGCCCGGCA          TGATCGTGAAAGGTA  45 314
APT61_RS09075 1943951 .. 1943977 -   -15  -2.80796   GCTGAGGATTGAAAG         GGCCGGGGCCGC ATA GCGGCCCCGGTT         TTGTTATTTTGGGAC  90 104
APT61_RS08985 1928263 .. 1928288 - -14.8   -3.0644   ATGCAACGCTGAACA         CCGTCCTCTC TCAGAG GAGAGGACGG          TGTAAATCATCAGGC  91 35
APT61_RS08975 1925570 .. 1925589 -  -2.8  -4.78107   GAGCAGTATGAAAAA            TGC-CATCG TGC CGAGGAGCA            GCTTGCCCTTTGGGC  73 416
        treA 1920559 .. 1920586 -   -12  -2.76696   GTCCCCCGTAATAAT        GCCGGGTAGCGGC TAT GCCT-TACCCGGC        CTACGCATCACATCG  80 484
APT61_RS08945 1918795 .. 1918822 -  -6.2   -4.7078   CCAATCAGCGAAAAA        GCCGG-TGAAGCC TGG GGCGTCAGCCCGC        GTCTGGTGACTGCCA  78 511
        ldcA 1917591 .. 1917626 -  -7.7  -2.62175   CCCTAACATATTAAT    GCCGCTTATAACGC GCTAATCCG GCGCT-TAAGCGGC    TTTTTTTATGCTTTC  58 31
        cvrA 1915372 .. 1915386 -  -3.4  -3.05521   AGGATATCGCCAACA               GCGGCC TGA AGCCGG               TGATGACCCTGCGCA  43 439
APT61_RS08915 1911463 .. 1911478 -    -9  -5.63517   GCGCTAAATAAAAAA              CCTCTC GTTT GAGAGG               TTTTTTTTCGGCTAA 100 73
        nhaB 1908963 .. 1908993 - -11.9  -3.62275   ATTTATCATTCGAAA      GTGCAGCCGGGCCA TATA CGACCCGGCTG-AC       TCTCTTAATGCGCCG  85 30
APT61_RS08900 1908287 .. 1908314 - -15.8  -3.31322   CCCAACCGCGCATAA        TAAAAAACCCGC CGAG GCGGGTTTTTTA         TTGTCGGACATTAAC 100 36
        minC 1905953 .. 1905965 -  -4.9  -3.29973   TTAAAAAGGGATCAA                TTCAA CGG TTGAA                CGGTCAAAGCGTTGT  52 9
APT61_RS08875 NONE
        minE 1904797 .. 1904834 -  -6.1  -3.85698   TGCCGGGGTTACAAA   CGCTGGGCCGGGCAAACA ACC TGCC-GCCCGGCAATGCG   CTCAATTATGAACGC  64 31
APT61_RS08840 1897886 .. 1897900 -  -5.6   -3.4758   GATGAAGAAGAGTAA               CGCGCT TAC ACCGCG               GCGATAATCTTAATC  56 16
        pabB NONE
APT61_RS08825 1895558 .. 1895573 -  -3.2  -3.14564   CCAGTTTTCCAGTAA              CGATGT AATA ACTTCG               CATAGTGTAAGAGGG  46 156
APT61_RS08820 1894087 .. 1894113 - -19.6  -3.79021   GAAAAGTTCATGAAA         TTCGCCCATCTG TAT CAGATGGGCGAA         AAGGGTATGAAAGAC 100 68
APT61_RS08815 1892369 .. 1892381 -  -5.5  -3.57144   GTGCGCATTGTTAAA                GAGCA ATC TGCCC                ACGACGAAGAAGAGT  56 43
APT61_RS08805 NONE
APT61_RS08800 NONE
APT61_RS08795 1887657 .. 1887676 -   -15  -5.71712   CTCCAGATAAAAAAA            CGGGGGCA TACT TGCCCCCG             GTGTATTCAGCAAAA 100 43
APT61_RS08790 1887113 .. 1887128 -  -6.2   -4.7878   TATTCACAAAAGAAA              TATAGC TTTG GCTATA               AGGCAGGGTAAAACC  78 75
APT61_RS08785 1885742 .. 1885752 -  -2.4  -4.56775   ACCGCCCGGGAAAAA                 GGCG CGT CGAC                 CTTCGGGCTGGATGT  66 497
APT61_RS08750 1880569 .. 1880586 -  -8.4  -5.24129   TTCCGGTATAAAAAA             CGCTGC TCTTGG GCAGCG              TTTTTTATGTGCGGA  95 42
APT61_RS08740 1878184 .. 1878201 - -12.7  -4.98531   CTTGTAAATGAAAAA             GCGCGTC CACG GACGCGC              TTTTTTTATGCCTGC 100 31
APT61_RS08715 NONE
APT61_RS08710 1869687 .. 1869710 - -14.6  -2.97951   CAGTGTATCACAAAG          GCTCCGGTGC GTTG ACACCGGAGC           GCAGGCATTAACGTG  91 33
        yebU 1868176 .. 1868207 -  -4.5  -3.26758   AATGAAGAGCAAAAG      CGCCAGTAAAAAA GTGCGT TTTTTAACTCGCG       TCGACGTTACCGGTA  50 16
APT61_RS08700 1867828 .. 1867843 - -11.8  -4.10188   TAGAGGGACAAATAA              CCCGCC TGCG GGCGGG               TTCTCTCTGAATCAT  91 37
APT61_RS08695 1867428 .. 1867448 -  -5.3  -2.64218   AGCGGTCAGGAGAAG            GGGATCGCC GGA GCCGATCAC            TTCTGGTTTGGTCAT  46 137
APT61_RS08685 1865412 .. 1865440 -  -5.3  -6.09888   TTCCAATAAAAAAAA       CCGC-AGGCTTC TCTTCG GAAGCATTGCGG        TTTTTGTGTTTAAGG 100 374
APT61_RS08665 1863353 .. 1863372 -  -4.3  -3.96531   GCAGAGATTCATAAA            GCCCCTGA ATGAA TCA-GGGC            TTTTTATCCTGCCAT  60 74
APT61_RS08660 NONE
APT61_RS08655 1861686 .. 1861720 -  -2.7  -3.83502   TACCGCTACATGAAA    TCCTACAGCCCCTACG ATAA CGTTGAGGC-GAAGGC     CTATCCGCACATGCT  53 275
APT61_RS08635 1857376 .. 1857391 - -11.8  -5.10208   CAATGCCAACAAAAA              CGGGCC ATTC GGCCCG               TTTTTTTATCCTGCT 100 31
APT61_RS08615 1852744 .. 1852767 -  -5.4  -3.54424   GCTCATCGGTGGAAA          CGATTTCA TTAATGGG TGAAATCG           CGATTCGAATTAGCA  56 10
APT61_RS08610 1851745 .. 1851757 -  -3.4  -3.53012   CTCCGTTGTCTGAAA                CAAC CTGGT GTTG                CGTGAACGATGATTC  50 115
APT61_RS08605 1850213 .. 1850230 - -12.7  -6.04324   CTAAAAAATAAAAAA             TCCCCCG GTTT CGGGGGA              TTTTTTTATGGCAAG 100 76
        znuC NONE
        znuB 1845146 .. 1845175 -    -5  -4.18494   GACCCCGATGGAAAA      GGCCGGAT--GGCG ATAG CGCCTTATCCGGCT       TAGAGCAATTGCAGG  64 72
APT61_RS08545 NONE
APT61_RS08540 NONE
APT61_RS08535 NONE
APT61_RS08530 NONE
APT61_RS08525 1835590 .. 1835603 -  -6.7  -3.31461   CAGGCAGGGGTAGAA               GAGCT TCAC AGCTC                GGCAGGCAAATGGTT  54 369
APT61_RS08510 1832371 .. 1832400 - -18.1  -3.30619   AAGTACTTCTGATAA       TAAAAAACCCGGC AAAT GCCGGGTTTTTTA        TTCGTTCTGTAGCCC 100 81
APT61_RS08425 1812149 .. 1812167 - -13.1  -3.35679   CGCGGGGATTGATAA             GGGGGCC GCGGT GGCCCCC             TTATCACGTTCACAG  87 110
APT61_RS08390 1804972 .. 1805011 - -21.1   -3.0264   AAACTTGCCTGAATA  TAATTTCACTCAGCGCA TTACGC TGCGCTGAGTGAAATTA   ACAGCACATCTACTT 100 3
APT61_RS08355 1797059 .. 1797080 - -14.5  -3.39556   AAGCTTGTAACAACA           TTACCCGGC GCAG GCCGGGTAA            GTGACGTAAAGCAGA  93 44
APT61_RS08350 1795166 .. 1795179 -  -8.1  -5.24129   TGTTCTGATAAAAAA               CCTGC TTCG GCAGG                TTTTTTTGTGCATGC  93 431
APT61_RS08340 1793420 .. 1793435 - -10.4  -4.28361   CCAACGCCAGGAAAA              GCCAGC TTAT GCTGGC               TTTTTTTATGCCCGC  85 31
APT61_RS08330 1792105 .. 1792126 - -14.5  -2.80821   TGTTTAAACATATTA           TTGCCAGCG AGAT CGCTGGCAA            CGGAATTAATAATAG  90 31
APT61_RS08325 1791399 .. 1791420 - -12.9  -3.99374   CGCCACTAATAATAA           CGCGGCGCC AGAA GGCGCCGCT            ATGATATTAATTTTG 100 32
APT61_RS08310 1788788 .. 1788806 -  -5.2  -2.91452   AGCATCTGAACGATA             TCGCCGAG CGC CTGAGCGA             TTACCCGGATCAGTT  48 502
APT61_RS08300 NONE
APT61_RS08295 NONE
APT61_RS08290 NONE
APT61_RS08285 NONE
APT61_RS08280 1782963 .. 1782978 -    -6  -3.01712   CTTTGTCTCGGAACA              GGCGGC GGCT GCCCCC               TGGGTGATGAACTTT  51 130
APT61_RS08255 1777807 .. 1777841 - -14.3  -3.48593   CAGGGGCTGAGACAA     CATGCCCCTGGTGTG ATGTA CGCAACAGGGGCATG     AAGGGTGAACGGATT  93 39
APT61_RS08250 NONE
APT61_RS08245 NONE
APT61_RS08240 NONE
APT61_RS08235 1773542 .. 1773566 -  -5.1  -4.35116   TAGTCGATAGCAAAA          TCAAGTGATTA GCA CAATGACTTGA          TGATTGCGGGAATAG  69 435
APT61_RS08200 1769602 .. 1769626 - -14.3  -3.74693   TTGCAGGCGATGAAA          CGGCTGAAGGC ACT GCGTTCAGCCG          TTTTTGTTTTATTGA  95 34
APT61_RS08145 NONE
        fliS NONE
APT61_RS08135 1755602 .. 1755612 -  -8.2  -3.28712   TTCCTTGCTCCAGAA                 GCCG TTT CGGC                 GGACCTCTGGAGTAT  66 53
APT61_RS08130 1753817 .. 1753831 -  -7.1  -3.07816   CTGGTAGTGACGCAA               GAGGG GGATA CCCTC               GACTGCCGCCAGTGG  54 292
APT61_RS08120 1752732 .. 1752755 - -11.1   -5.4182   AATGATAAATAAAAA          GGTCAACCT TTTATC AGGTTGACC           TTTTTATTATTTACT 100 262
APT61_RS08105 NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
APT61_RS08080 1744877 .. 1744890 -  -2.3  -2.83449   AGAGGGGGATAATCA               CGCTA CCTC TGGCG                TTTAGGTTTAGGCGA  40 33
        fliL NONE
        fliM NONE
        fliN NONE
APT61_RS08060 NONE
        fliP NONE
        fliQ NONE
        fliR 1740622 .. 1740638 -  -2.1  -4.06785   AGATGGATAAAAACA              TTCAGGC CGC GCCAGAT              ATATCCTGGTAGATG  55 99
        rcsA 1739744 .. 1739762 - -13.2   -4.8269   CAGAACGAGGAAAAA             TCTCTGGC ATA GCCAGAGA             TCGGGCAACAATTGA 100 57
APT61_RS08030 1738878 .. 1738894 -  -3.7  -2.66598   TAACGAATTTACAAG              TGCTTCT TGC ATAAGCA              AGCTTGATCCCGGTC  42 67
APT61_RS08025 1737685 .. 1737716 -   -10  -3.90048   TCCTGGTGAAAAAGA      GCCAGACGGCACGC ATCA GCGTGTCGATTGGC       GTGAGCAGCGCTCAG  77 133
APT61_RS08005 1733352 .. 1733374 -  -6.8  -4.72986   CACCCGCAGTAAAAA           CATGCGCGCC ATC GGCACGCGGG           ATACGGCCATCGAAA  84 428
APT61_RS07980 1729076 .. 1729093 - -12.7  -5.04601   GGCAGAAAGCAAAAA             GCCCGCT TCGC AGCGGGC              TTGAAAGAGGTGTAA 100 48
APT61_RS07975 1727372 .. 1727382 -  -3.2  -4.50058   CATCGACAATCAAAA                 CATG TAT CACG                 CGCTTTTCCTTTCAC  66 21
APT61_RS07970 1726374 .. 1726408 -  -5.6  -3.76413   TGTTAAAATGCCAAA     TTCCCCGGCATGATGG CAA CCATCAAAACGGAGAG     ATGCCGGAGCGGCTG  58 273
APT61_RS07960 1725413 .. 1725424 -  -4.4  -3.35278   TGAACTACAGAGGAA                TCGT GTGA ACGA                 GGCGCATGTTAATGG  50 113
APT61_RS07955 1725294 .. 1725331 - -18.7  -3.10173   AGAAATGTGGAAAAG   CAAAAAGCCCGCTTAAG TTTC CTTAAGCGGGCTTCTTA    AATATGGCTCCTCTG 100 30
APT61_RS07940 1722620 .. 1722657 - -18.7  -2.76261   GCTGAACCCGGAAAG   CAAAAAGCCCGCTTAAG TTTC CTTAAGCGGGCTTTTCA    AATTTGGCTCCTCTG 100 30
APT61_RS07930 NONE
APT61_RS07925 NONE
APT61_RS07920 1716713 .. 1716732 -   -10  -4.79953   ACAACAACAAAGAAA            CGGCAACC CGAA GGTTACCG             TTTTTAGTGTCTGTA 100 62
APT61_RS07905 1714715 .. 1714732 - -11.3   -5.0925   CCGGAAAAGCAAAAA             GCCTGCT CGAA AGCAGGC              TTCTTAAATGTGGCT 100 36
        sbcB 1709534 .. 1709554 - -14.7  -6.23545   GGCAAAGAAAAAAAA            GCCGGAGAC ATC GCCTCCGGC            TTTATTGTGTTCTCA 100 43
        hisG NONE
        hisD NONE
APT61_RS07850 NONE
APT61_RS07845 NONE
        hisH NONE
APT61_RS07835 NONE
APT61_RS07830 NONE
APT61_RS07825 1698652 .. 1698665 -  -9.5  -5.82388   AAAGCTGAAAAAAAA               CCGGG TTTC CCCGG                TTTTTTTATTTGTGC 100 31
APT61_RS07815 1696432 .. 1696451 -   -15  -5.36965   CAACAGCAGAAAAAA            GCCCGGCA ATTA TGCCGGGC             TTTTTTTTAAACCTT 100 32
APT61_RS07650 1657567 .. 1657598 -  -9.4   -2.8092   TAAGACTGCACCAGA      CTGTCCCCTCTCCCC TTG GGGGAGAGG-GTTAG      GGTGAGGGGGAGGGG  65 51
APT61_RS07630 1649717 .. 1649728 -  -5.8  -2.88544   CGGGATCGGTAGATA                CCTG GGAG CAGG                 GCGTGCGTGCCATTC  48 514
APT61_RS07620 1647852 .. 1647892 - -14.8  -3.85698   GGCGCGCCTGATAAA GTTG-CAGGCCGGGCAAGCG AAG CGC-CGCCCGGCCTGTCAAG ACTAGCTGAAAACGA 100 27
APT61_RS07615 NONE
APT61_RS07610 1643328 .. 1643349 -  -2.2  -2.59569   GCGGTAAATGAAGAG           GGCGAAAA ACTTCA CTTACGCC            TCCTCTTCTTCACGT  39 19
APT61_RS07605 NONE
APT61_RS07600 NONE
APT61_RS07595 NONE
APT61_RS07590 NONE
APT61_RS07575 NONE
APT61_RS07570 NONE
APT61_RS07565 1633253 .. 1633280 -  -9.1  -5.60993   GTTTGGATAAAAAAA        CGCCGACGGCA GGACAG TACAGTCGGCG         TTTAATTCAGCGGGG 100 44
APT61_RS07550 1630805 .. 1630836 - -10.3  -5.76633   TTACAGACAAAAAAA      TTAGCCTGCGTAA GGGAGA TTACTCAGGCTAA       GGAGGTGGTTCCTGG 100 156
APT61_RS07545 1630222 .. 1630251 -  -3.4   -4.3902   AGGATAAAAATTAAA       TGAGTGGCGAGC CAAAAC GTGCGCCACTCG        GACCAGTTCGTTTAT  63 37
APT61_RS07540 1629197 .. 1629233 -  -3.6  -5.24129   CTGGCCTACAAAAAA   CGTAGGCCCGGGCAG-GC GCA GCACTGCC-GGGCAGACC   CTCAGCGCAGAAGCG  79 27
APT61_RS07490 1616744 .. 1616761 -  -3.3  -3.82824   TATGACCGATAACAA             CACAGCC GAAC GCCTGCG              GGGGTTTATTGATGC  55 425
APT61_RS07480 NONE
APT61_RS07475 NONE
APT61_RS07470 1612106 .. 1612116 -  -3.2  -5.01732   AAGGCGTTTAAAAAA                 TCGA TGG CCGA                 CGGCGTGAAGCTGAT  76 128
APT61_RS07450 1608431 .. 1608451 -  -6.9  -3.06815   ATCGCGGCCAATATA            GAGCCTT TTTGCGC AAGGCTC            AATGGTTAATTGTTT  55 141
APT61_RS07445 NONE
APT61_RS07440 1605441 .. 1605463 - -12.6  -4.20918   GGGAAGGGGAATAAA           CCCGGCGGCA GAG CGCTGCCGGG           TTGAATAACTTACTT 100 35
APT61_RS07420 1600752 .. 1600771 -  -9.2  -5.19879   GCGCAAAGACAAAAA            CGGTCACC TCAG GGGGACCG             TTTTGCTTTTATCTT 100 62
        metG 1597366 .. 1597403 - -16.7  -2.77781   GGGTAGTAAAAGGTA   TAA-AAAAAAGCCGGAGA TTA TCTCCGGCTTTTTTGTTA   TTTCACCTGATGACC 100 23
APT61_RS07390 1593388 .. 1593400 -  -3.3  -2.82759   AACAGAGCGATTATA                CGGTG AAG CACGG                CTGTTAATGAACCAT  43 40
APT61_RS07360 1584646 .. 1584667 - -13.1  -5.00616   GCTCCTCGCAAAAAA           GCCAGAGAA AGTT TTCTCTGGC            GACCCGAGGTTACTC 100 80
APT61_RS07355 1583777 .. 1583795 -    -3  -4.26903   TCCAGCTGACTAAAA             CCGGCTTT ACT AACGCCGC             GGGTCACTGTCTGGT  64 298
APT61_RS07340 NONE
APT61_RS07335 1580839 .. 1580853 -  -3.4  -3.78775   GGGGCGATGACCAAA               GCCGCG TTT CTCGAC               ATGGAATATGACCAG  52 498
APT61_RS07290 NONE
APT61_RS07285 1571237 .. 1571252 -  -5.4  -5.01042   AACTCAAATGAAAAA              TGCG-CG ACA CGTCGCA              AATTTTAGCCCATGA  82 30
APT61_RS07280 1570213 .. 1570239 - -11.7  -3.15663   AGGGATTTTCATCAA        TTG-TGCGGGCA TTGC TGCCCGCATCAA         CGACTTAAGCCAGAA  79 30
APT61_RS07275 1569325 .. 1569339 -  -8.5  -5.31456   TCAACGCATAAAAAA               CCCGC TTAAT GCGGG               TTTTTTTATGCCCGG  95 76
APT61_RS07235 1560102 .. 1560124 - -15.6  -2.87132   CCGGCCTGTGACAGA           CCCCTCTCCC TGC GGAAGAGGGG           CGAGTGAGGACGTGA  95 50
APT61_RS07215 1554064 .. 1554077 -  -3.8  -3.97368   CTGTTAACCCACAAA               CGCT TATGAT AGCG                GGTTAACAGGAGAAG  60 52
APT61_RS07210 1553141 .. 1553168 -  -3.9  -4.63218   GGCTGTTGAATAAAA        GGGGTGCGCCG CAGGAT CGGCGTTTCCC         TTTCGTTCATCCTTA  68 38
APT61_RS07205 1552783 .. 1552802 - -13.6  -4.65895   TTCTTCATTCAAAAA            GGGCAGAG GCGA CTCTGCCC             TTTTTTTTTGCATTT 100 39
APT61_RS07185 1547311 .. 1547338 -    -4  -4.09511   AACAGCGCTGCAAAA        TCTTTGGCTCGC CGCT GCGGCCCAAAGT         GTGCGCCAGCCTGCA  60 119
APT61_RS07175 1546362 .. 1546377 -  -8.2  -5.60993   GGGCCGACAAAAAAA              CCGGCC ATTG AGCCGG               TTTTTTTATGCGTGC 100 93
APT61_RS07165 1543392 .. 1543409 -  -6.9  -4.17048   CCTGGCGCAAAAGAA             CACCCCT GAGA AGGGGGG              AGGGCGAACGGGAGG  71 70
APT61_RS07160 1542334 .. 1542351 - -11.3   -2.9583   TAAGCAGTTAAACCA             GGGCAAC GTTA GTTGCCC              GAACTTAAACGAAGC  74 16
APT61_RS07155 1541549 .. 1541572 - -11.1  -3.38446   CAAGCAAATAATACA          TGAGGGATC TGCATT GATCCCTCA           TTGATACTGTTAATT  78 72
         spr 1540546 .. 1540563 - -11.3  -6.24157   AGTTATAAAAAAAAA             GCACTGC CGTA GCAGTGC              TTTTTTAGCATACTG 100 71
APT61_RS07145 NONE
APT61_RS07140 NONE
APT61_RS07135 NONE
APT61_RS07130 NONE
APT61_RS07125 1533182 .. 1533200 -  -2.3  -4.07568   GCCTGTTCGTGAAAA             GCCAGGA CGAGT TCGCGGC             GACCTGCCGCCTGAA  56 96
APT61_RS07105 1528655 .. 1528684 -  -8.5  -2.69151   TCTCTGTACATATTA       TTCCTGCTACAGG CGAC CCAGCAGCAGGTA        AGTGTTCTGCCTCAC  61 100
APT61_RS07100 1528311 .. 1528325 - -12.8  -5.61596   ACGGCCATAAAAAAA               CCCCGC AAT GCGGGG               TTTTTTCTCAACCTG 100 48
APT61_RS07090 NONE
APT61_RS07085 NONE
APT61_RS07080 1524963 .. 1524980 -    -7  -5.64274   CCAGGCATAAAAAAA             CCAACC GTAAAA GGTTGG              TTTTTTTTGGGATTT 100 42
APT61_RS07060 1521178 .. 1521198 - -15.5  -5.47218   TCTGATGTAAAAAAA            GCCGGGTTA ACA TAACCCGGC            TTTTTTATTAACGCG 100 33
APT61_RS07050 1517709 .. 1517719 -  -4.6  -3.02144   GCATTGGCGGCAATA                 CCGG TAA CCAG                 ACCATCACCATGATT  47 339
APT61_RS07015 NONE
APT61_RS07010 1506536 .. 1506551 -    -9  -5.60993   CGGGGCATAAAAAAA              GGCAAC TTAC GTTGCC               TTTTTACGTTGACCT 100 46
APT61_RS06995 1499219 .. 1499239 - -11.9  -4.56775   ACGGGTGGTCAAAAA            TGCGCAACA AAC TGCTGCGCA            TTCTTAGAAAAAGAG 100 50
APT61_RS06990 1496610 .. 1496637 -  -9.8  -2.88667   GCCTACAAAAACGTA        GGCCGGGTAAGCG TAA CGC-CACCCGGCA        AAATTACTTAGATCT  68 33
APT61_RS06985 NONE
APT61_RS06980 1495134 .. 1495166 - -11.4  -2.78264   AAGACGAAGACATCA     CCTTA-ACCCTCTCC CACG GGAGAGGGGATAAGG      GCGCTTACATTTCGA  76 30
APT61_RS06965 NONE
APT61_RS06960 NONE
        glpC 1488379 .. 1488402 - -12.4  -2.50816   TGTCGAGTGATGAAT          CTGCCGGGGC GGAC ACCCCGGCAA           CCTCTAGCCTAGCGC  78 29
APT61_RS06900 1477298 .. 1477312 -  -5.6  -3.90316   ACCCGGGGAAAAATA               GAGCGT TAA ACGCGC               ACCACGGCAAAATCT  61 16
APT61_RS06895 1476149 .. 1476162 -  -9.5  -5.28481   CACTGAACGAAAAAA               CCCGC CTCA GCGGG                TTTTTTTATGCTTGC 100 95
APT61_RS06820 1457247 .. 1457269 - -19.2  -3.70902   GCGGTGAGATGCAAA           TCGGGCTGCC AGT GGCAGCCCGA           GGGTTATCTTTACTG 100 35
APT61_RS06815 1456547 .. 1456579 - -22.9  -3.28712   TTTCCGTTCTGACAA      TTCGCCGGGTAAGGC TGC GCCTTACCCGGCAAA      ACACTATAAAGGTGA 100 29
APT61_RS06790 1451351 .. 1451378 - -16.4  -4.36914   GGGCGGGCTACAAAA        CAGCACCGCCAGC ATT GCTGGCGGTG-TG        GAATCAGGCAGTCAG 100 29
APT61_RS06785 1449129 .. 1449146 - -12.7  -5.67063   GCGACCATAAAAAAA             GGCGACC ATCA GGTCGCC              TTTTTGCGTTTAGAT 100 46
APT61_RS06765 NONE
        folX NONE
APT61_RS06755 NONE
APT61_RS06750 1444537 .. 1444562 - -11.1   -2.7263   ACGACTGCTGTAAAC         GCCCGGT-GGCG CTA CGCTTACCGGGC         CTACGGTTTTGGCAG  72 69
         flk 1429230 .. 1429267 - -10.5  -3.06261   TCGTAAGGCGTAACA   GCTTGCTGCCCGGTAGCG TAG CGCCACCGGGC-GATAAC   ATCACATCACCAGCA  72 27
        mnmC 1424413 .. 1424423 -  -6.8  -4.58395   CGCAGCCTGGAAAAA                 GCCA TTC TGGC                 AGGCGAACTCTCCCC  79 204
APT61_RS06620 1419188 .. 1419229 -  -7.1  -3.66874   GCAATCTGACGTAAA CCCCATCCAGGCGGGTAGC CTTA GCCACCCGCCTGCCTGTCA  GGGCAGCTCAGGCGG  67 23
APT61_RS06595 1412850 .. 1412878 - -13.3   -5.7946   TGCGGAATAAAAAAA        GAAAAGGTGAGCA CGA TGCTCACCTTTTT        TTATCACTACGTGAT 100 40
APT61_RS06585 1410778 .. 1410795 -  -2.6  -3.44051   GCGGCACGATTATAA             CGCCAT TTATCC AGGGCG              TTAAGCTCGCCACCG  47 65
APT61_RS06580 NONE
APT61_RS06575 NONE
APT61_RS06570 NONE
APT61_RS06565 1408987 .. 1409009 - -17.8  -2.88579   TTAAGCGGGGATACA           GACCACCTCC CGG GGAGGTGGTC           TGTAAGCATTACCAC 100 34
APT61_RS06520 NONE
APT61_RS06515 NONE
APT61_RS06510 NONE
APT61_RS06505 1386943 .. 1386953 -  -8.2  -2.58544   TGGTAGCGCCAGAAG                 GGCG ATA CGCC                 ATACTGCTTATATGA  61 211
APT61_RS06500 1385945 .. 1385969 - -14.5  -4.19258   ACAGGTGATTGAAAA          GGTTAGTTTCA AGG TGAAACTAACC          TTCAGCAGAGGACTA 100 38
APT61_RS06495 1385494 .. 1385538 - -18.1  -3.14344   CAGGCCGGGCAGTAA GTAGCAAAAAAAACAGGAGCC AGT GGCTCCTGTTTTTTTAACTGC GTTTTCTTCGCTCAG 100 37
APT61_RS06485 NONE
APT61_RS06480 1381321 .. 1381342 -    -5   -3.4072   GATTGTGCATGACAA           CCCGGGGC TGCTCG GCGCCGGA            GCGCATCTGCGTCAG  51 103
APT61_RS06470 1378670 .. 1378693 -  -2.2  -3.85817   ATGCTGCGGGATAAA          CAGCGCCCGG TGAT CATGGTGCTG           AACAACGAAGGCTAT  53 305
APT61_RS06460 1376060 .. 1376075 -  -7.5  -3.39529   TTAACGCAATATTAA              GGGGC GGTAAA GCCCC               GGATAATCGCTTTAA  62 84
APT61_RS06455 1375646 .. 1375661 - -11.8  -5.31275   TGGGATTATAAAAAA              GGCGCC GCGA GGCGCC               TTTTTCGTATCAGTG 100 35
APT61_RS06445 1372832 .. 1372852 -  -9.7  -5.42862   ACAGGCGTAAAAAAA            CCGGGGA GGATAAG TCCCCGG            TTTGTTTATGCTGAT 100 40
APT61_RS06425 NONE
APT61_RS06420 1369223 .. 1369250 - -12.8  -5.99154   CAGGAAACAAAAAAA        CAAAACGGCAGG TTAC CCTGCCGTTTTT         TTTATTCTTCTGGCT 100 27
APT61_RS06410 NONE
APT61_RS06405 NONE
APT61_RS06400 NONE
APT61_RS06395 1367121 .. 1367151 - -16.3  -2.90763   TTCATATCGCAGATA       GCAAAAAGGCGCC TTTAG GGCGCCTTTTTAC       ATTGGTGGGTCGTGC 100 28
APT61_RS06390 1366976 .. 1366990 -  -8.5  -5.24989   GCAGATAGCAAAAAA               GCGCC TTTAG GGCGC               CTTTTTACATTGGTG  95 36
APT61_RS06385 1366321 .. 1366349 -  -2.4  -3.61398   GGTTCGCCGTAAGAA       TCGCTCGCTGTCGG GTG CCG-CA-CAGGCGA       TCTGGGAGGTGGTGC  47 105
APT61_RS06375 1364370 .. 1364402 - -14.2  -3.16647   GTTACTGATTAAAAC     CG-AGGGGCTGACCC AGCT GGTTCAGCCCCTGCG      TCGTCCCTAAACTTT  90 32
APT61_RS06355 1360103 .. 1360122 - -13.6  -3.69395   TCCAGTATGGAATAA            GGGATGGC ATAA GCCATCCC             TTTATTTACCTTATT  93 36
APT61_RS06350 1358963 .. 1358978 - -10.4  -5.26316   GCAGGCCACAAAAAA              GCACCC GAAT GGGTGC               TTTTTTACGCGATAT 100 54
APT61_RS06345 NONE
APT61_RS06340 NONE
APT61_RS06335 1356012 .. 1356029 - -12.7  -5.38054   CCTGACAAACAAAAA             TGGCGCC CGAA GGCGCCA              TTTTTCTGTGTGGCA 100 46
APT61_RS06280 NONE
APT61_RS06275 NONE
APT61_RS06265 NONE
APT61_RS06260 1339710 .. 1339729 - -12.2  -4.74012   ACGATAAAAGCAAAA            CGGTAACC ACAA GGTTACCG             TTTTTTGTTGGTTCC 100 71
APT61_RS06240 1333913 .. 1333928 -  -4.8  -3.22499   TGGAGAAATAAAGGA              GATAAT GTAA ATTATC               ATGCGCTTTATCCGC  50 115
APT61_RS06235 1330668 .. 1330686 -  -7.3  -5.51046   TAAACACACAAAAAA             GGCGGCC GGTAA GGACGCC             TTTTTCTTTTTCAAT  93 44
APT61_RS06230 NONE
APT61_RS06225 NONE
APT61_RS06220 1328404 .. 1328432 - -21.9  -2.87211   AGTTTTTCTGAGAGA        TAACCCTCTCCCC GCC GGGGAGAGGGTTA        AGCCATTACTTCTTC 100 31
        gcvR NONE
         bcp 1320660 .. 1320677 - -11.3    -4.946   AGCAAACACTAAAAA             CGGCAAC CCAG GTTGCCG              TTTTGCATTTATCCT 100 40
APT61_RS06170 NONE
APT61_RS06165 1317214 .. 1317228 -  -5.7  -4.23674   TCGGATGAAGATAAA               CTGCA GGCTT TGCAG               CTGCGGGCGCGGTTG  66 238
APT61_RS06140 NONE
        purN 1310966 .. 1310988 - -15.6  -3.01912   CTATATTCAGAGAGA           CCGGGTAAGC AAA GCCTACCCGG           CAAAAGATTACTCTT 100 33
APT61_RS06130 NONE
APT61_RS06125 1307140 .. 1307162 - -14.9  -3.53091   ACGTTGCTGTCGAAA           CAGGCGCTC ATGAA GAGCGCCTG           ACAGGAGATTACGCG  93 34
APT61_RS06115 1304151 .. 1304161 -  -6.8  -3.93556   ATCGAGGCAATTAAA                 CGCA TGG TGCG                 TGTCGGGCTGGGGTA  66 236
APT61_RS06105 1302030 .. 1302044 -  -8.5  -2.64616   TCGCCACCGATATGA               CCGCC GGAAT GGCGG               AGCAGATCCTCGGAA  57 162
APT61_RS06095 1300788 .. 1300800 -  -9.1  -3.32844   GTGTTCAGTGCATAA                CCGCA GCA TGCGG                CGGCACGGTGAATTC  69 2
APT61_RS06090 NONE
APT61_RS06085 1299699 .. 1299715 - -10.8  -3.78775   CTCGTCATGATTAAA              GCCCGC AGTCA GCGGGC              TTTTTTTCGCCGGTA  81 41
        xseA NONE
APT61_RS06060 NONE
APT61_RS06055 1292194 .. 1292210 -  -2.1  -4.19953   GATTGAACCGCAAAA              CGGTGTG GCG CACTGCG              AGAATTGCCATAAAG  59 180
APT61_RS05985 NONE
APT61_RS05980 1269443 .. 1269454 -  -4.4  -3.39895   GCCTCCATTAATGAA                TCCA TTGA TGGA                 TTGTCGGTGTTTTTT  50 84
        sseA NONE
APT61_RS05970 1267724 .. 1267742 -  -8.8  -2.76322   TCACCGAACACATCA             CGCCGTTC TAC GAACGCCG             CTGGGGTGGCTTCCT  58 91
APT61_RS05910 1257738 .. 1257759 - -10.1  -2.70932   CGGCCGTTTTAATGA           GGTGAGGGC TGAT GCCCTCACA            TTGCCCCCTTCCACG  69 101
APT61_RS05895 1254744 .. 1254760 -  -2.9  -3.14602   GGCAGCGCACTAAGA              TTCCAGC ATG GCCCGAA              TATGTTCCTGCTGCT  45 3
APT61_RS05885 1252772 .. 1252787 - -11.8  -4.30719   GCCCCGCAGAATAAA              GGCCGC GTAT GCGGCC               TTTTTTTATGGCTAA  91 37
APT61_RS05875 1249977 .. 1249994 - -12.7  -5.81412   GCCAGGCAAAAAAAA             GCCCCTC TTCG GAGGGGC              TTTTGCATTACAGCA 100 33
APT61_RS05845 1239316 .. 1239337 - -10.9  -3.20494   ACTCAATCATGAATA           CTGGATGCGC CAT GCGC-TCCAG           CTTGCCAAACGTGCC  76 363
APT61_RS05825 NONE
APT61_RS05820 1234791 .. 1234809 - -12.4  -3.55444   GGGCCATCTGGGAAA             CGCACCAG CAG CCGGTGCG             TTTTCTGGCCAAGCG  77 260
APT61_RS05760 1223093 .. 1223104 -  -7.2  -3.21099   CCTCCTTATTATGAA                CCCG GCGT CGGG                 TGCGCAACGCCCGAG  56 355
APT61_RS05750 1221219 .. 1221253 - -15.9  -3.10344   CTGCCAGCGAATAGA     TACAAAAACGCCGGG TTAAC CCCGGCGTTTTTTTA     CGCTTATTTCTGTGA 100 29
APT61_RS05740 1219761 .. 1219788 -    -7  -3.03124   CGCCACCCGGCAATA        GGCCCGGT GGCGCTATGTTT ACCGGGCC         TGCATATCTGCTCTG  59 51
APT61_RS05730 1217932 .. 1217959 -  -7.6  -5.26918   AGAGCGTAGAAAAAA        CGCCATTCTCGC AGAG GCGAGAGCGGGG         CACAAGTTACGTGCC  93 49
APT61_RS05725 NONE
APT61_RS05720 1214440 .. 1214455 -  -3.2   -2.8664   CATTGAAGGATTATA              TGGGCT ATGC AGCCAA               CAGAAGCGGGCAATC  43 83
        pssA 1213022 .. 1213040 - -12.4    -5.252   GATCTCCATAAAAAA             GCCCCGTC AAT GACAGGGC             TGAAAATTACAAAAT 100 32
APT61_RS05710 NONE
APT61_RS05675 1205199 .. 1205230 - -14.6  -4.92314   AGTAAGTCACAAAAA      GCAAAAACGAGCCT CCAG AGGCTCGTTTTTGT       TTAAAAACCAGGCAA 100 128
APT61_RS05655 1199869 .. 1199888 -   -15  -5.68039   AAATGGATAAAAAAA            CGGCAGCC CTTG GGCTGCCG             TTTTGCATCTTAACG 100 46
APT61_RS05650 1199255 .. 1199270 - -11.8  -6.07374   ATAAAAAACAAAAAA              CGCGCC CGAA GGCGCG               TTGGCGATAGACTCA 100 51
        pheA 1197874 .. 1197886 -  -6.2  -3.53444   TTATTGCGCGTTAAA                CCGG ATCCA CCGG                GACCACGTTTTCGCT  59 8
APT61_RS05625 1193699 .. 1193720 -  -5.9  -3.65542   TTCACTGCCAAAATA           GAGCGCATGA CAT TC-TGCACTC           ATTGCTTCCCGATCA  61 454
APT61_RS05620 NONE
APT61_RS05615 1191253 .. 1191270 -  -2.6   -3.1706   AATTGATGCCAGCAA             GCTGGA GATACG TCCGGC              GAAGAAGGCTGCAAT  41 511
APT61_RS05575 NONE
APT61_RS05570 1183472 .. 1183489 -  -2.6  -4.11216   GCTGGACGTTGAAAA             GGCGCA TAAATT TGCGCT              GGAGAAGTTCGTCAA  59 410
        ppnK 1182192 .. 1182207 -  -3.2   -4.0162   TGTGTACAGTATAAA              CTGGTT TTTT ATCCAG               TAAAGTGCTGGATGC  58 45
APT61_RS05555 1180470 .. 1180484 -  -2.8  -2.88861   TATGACCCTGAGATA               CCGAAA AAG TTTAGG               CAGCCAGCAGTTCTT  42 21
APT61_RS05550 1179944 .. 1179973 - -13.1  -4.06678   AGGCAGCGAGAGAAA       CAAAAAAGGTGCTC ATT GAGCACCTTTTT-G       TATTTCTGAAACCTT 100 39
        smpB 1178475 .. 1178502 -  -2.6  -2.69433   CAAGTATACCAGAAC        TCGTAGCCGGGAT ACC ACCCCGGA-ACGC        TAACTTATTGAATCG  41 60
        ssrA 1178010 .. 1178035 - -16.1  -5.26316   TGAGGGCACAAAAAA         GCCCGCAGGGC TTGC GCCGTGCGGGC          TTTCAGGACTTCATC 100 73
APT61_RS05525 NONE
APT61_RS05520 1172502 .. 1172535 -  -8.3  -2.80622   ACAGATTTGACGAGA     TAAGGGTACAGATGA ATTA TTATCCATACCCTTA      GACGATTACTTCTCA  62 374
APT61_RS05515 1170988 .. 1171002 -  -5.6  -3.67775   ACGGCTACTTAATAA               GGGGTA TGC TCCCCC               TAAAATTGAGGCCGA  59 434
APT61_RS05495 NONE
APT61_RS05490 1164359 .. 1164371 -  -4.7   -3.1332   TAACAGATGAGTCAA                CAGGC GTT GCCAG                GTTTCAACGGGTGAC  50 126
APT61_RS05475 1161443 .. 1161479 -  -2.3  -2.65504   TTCGTACCAAAAACG   CAG-GCAGTTTTCTTC TTTAAT GAAGATTACTGCGCCG    TCTGACTTTCACAGC  39 15
APT61_RS05470 1160515 .. 1160533 - -11.7  -2.96712   AGGGCTAATAACAAC             GCCCGCA TTATG TGCGGGC             TTGCTGGCTGTTAAT  78 36
APT61_RS05435 1154085 .. 1154095 -  -2.6  -3.59481   AATAATGGATAAATA                 TTAT TGA ATAA                 AATTGTCTCTTACGC  49 129
APT61_RS05430 1150507 .. 1150518 -  -7.2  -3.55622   TTTAAGGCCGGGAAA                GGCG TTGC CGCC                 CTCCCGGCGCGTACA  64 43
APT61_RS05425 1133563 .. 1133598 -  -3.9  -3.39749   TGAACAACTTTATAA    TGTTAAG-CCCGGGCG ACGTG CGCCCGGGTCTTGTTA    TTAGCCTTAGCTGGT  50 32
APT61_RS05420 NONE
APT61_RS05415 NONE
APT61_RS05410 1128653 .. 1128665 -  -3.3  -4.43909   AGGGCAATAAAATAA                TGGGG CTT CCTCA                GCCCAGAAGGGAGAA  63 119
APT61_RS05385 NONE
APT61_RS05380 1123948 .. 1123960 -  -3.3  -3.10583   GAGGAAAAAAGAGGA                GGGGA TGA TACCC                AATTTGCCGCGCGCT  46 108
APT61_RS05375 1122828 .. 1122846 -  -5.2  -3.74251   TATATCCTGATCAAA             CGCACG GCGATTG CGCGCG             CCGCCGCGCCGCGCA  58 414
APT61_RS05365 1121733 .. 1121758 -  -7.5  -4.99035   CCAGTGACATAAAAA         TTCTGCGAGCC CGCG GACCCGCAGAT          TACCGATTAAAGTGA  85 67
APT61_RS05360 NONE
APT61_RS05355 NONE
APT61_RS05350 1119734 .. 1119754 - -12.6  -3.64703   CCCCTGTCAGCGAAA            TGCCCCGT AAGGA ACGGGGCA            TTGTGGTACAGCATT  90 58
APT61_RS05345 NONE
APT61_RS05340 1116853 .. 1116867 -  -2.8  -4.60487   GATGATGGTGAAAAA               TGCC TGGGAAG GGCA               GATGGAGGAGGCGCT  69 454
APT61_RS05315 1113921 .. 1113950 -  -3.5  -2.50307   GAAAGGGGGATTAAT       CCTAAAGCACAGA ATTA TCCGAGTTTCAGG        CTCCTTAATTCTGGT  42 124
APT61_RS05310 NONE
APT61_RS05305 NONE
APT61_RS05300 NONE
APT61_RS05295 NONE
APT61_RS05290 1102152 .. 1102166 -  -2.1  -4.98436   TGAAGATGATAAAAA               TAAGC ATCGG GCTCA               TCCTTAACAACCTCA  70 105
APT61_RS05285 1101812 .. 1101830 -  -2.4   -3.7791   GAACGATTCATTAAA             TGAGGTTA ACG TAAACCCA             GCGTATCGGGAAGGG  50 12
APT61_RS05280 1101414 .. 1101433 -  -4.8  -5.30575   CAAAAATCTAAAAAA            CCACCTGC GAGA GCGGGGGG             TCAGGAAAGAAGGTT  83 26
APT61_RS05275 NONE
APT61_RS05270 1100396 .. 1100406 -  -5.4  -2.66316   TTGGCTAGCATATTA                 GTGA ACC TCAC                 TGCACACTATTTCAA  48 32
APT61_RS05265 1099706 .. 1099718 -  -5.5  -2.77013   TACCGCTGGAATAAT                CGCTA TTA CAGCG                GCCAGATAATCTACT  49 282
APT61_RS05260 1099151 .. 1099161 -  -2.4  -2.80307   TAAAGTTTTATTATA                 CTGG GCG CCCG                 CCATTGATAGAGTAT  40 10
APT61_RS05255 1098572 .. 1098586 -    -5  -3.63627   GCCTTACACGCTAAA               GTCTGA CAT TCAAAC               GGCCAAGGAGCGTCA  57 220
APT61_RS05250 NONE
APT61_RS05245 NONE
APT61_RS05240 1096431 .. 1096444 -  -3.7   -3.1876   AACCTGATTGAGGAA               GGAGC AATT GCACC                ATTTGATTTTTCTAC  46 394
APT61_RS05235 1095801 .. 1095817 -  -3.7  -3.88232   GGCCGTAGATAAGAA              GCGAT AAAATCA ATCGC              GGAAGATCCCAATGA  55 114
APT61_RS05230 1095448 .. 1095466 -    -3  -2.58822   GTTTCTATACAATAC             GAGATCGC TTA GTGACCCC             ATTCCGCTATACGTC  41 77
APT61_RS05225 1095081 .. 1095094 -  -2.3  -3.47227   TGTTAATTATCATAA               TAGGG TGTT CCCTG                GGCTGTTTATCGGTA  47 32
APT61_RS05220 1094428 .. 1094442 -  -2.8  -2.93357   AATTAGTTCAAATGA               GGCA ATTTTTA TGCC               CGTAATCATCATACA  43 175
APT61_RS05215 1093818 .. 1093843 -  -3.2  -2.71483   ATAGTCCTGGAATTA         GCCCCCCC CTGTATTGGT AGGGGAGC          ACGTTTACTCATCAT  42 241
APT61_RS05210 1093045 .. 1093097 - -22.1  -3.83409   GCACATATCATGAAA CATGCACAGACTGTCCCCTCTCCCT TTC AGGGAGAGGGGACAGTCTGAGGGTC AGAAGCGATAACCTA 100 24
APT61_RS05200 1091445 .. 1091467 - -16.3  -2.55351   GGCTGTGACATTAAC           CGGGGCGAG GCCGA CTCGCCCCG           ATCGCCATTAATATC 100 33
APT61_RS05175 1086165 .. 1086177 -  -3.3   -4.9725   ATCTCCACACAAAAA                CTGGC ACG GTCAG                CTCCCTCTCCCCTTT  73 110
APT61_RS05140 1076187 .. 1076198 -  -4.4  -4.23434   TAAAAGAGGGTAAAA                CTTC ACGC GAAG                 GCTGGCAGCTGTGCG  62 264
APT61_RS05135 1075847 .. 1075869 - -13.4  -3.16742   TTTAATCCGTACCAA           CCGGGCGG ATTAACG CCGCCCGG           TCGCGTCTGTTTAGC  88 36
APT61_RS05125 1074326 .. 1074350 - -11.4  -2.93549   GACTCGCAATAATGA          CGCGACTGGC TTTTC GCCAGTCGCC          GTGCCTTACGCTTTG  78 31
APT61_RS05115 1073441 .. 1073464 - -12.4  -5.18355   GTTAAAAACGAAAAA          CCCCCACACC AGAG GGCATGGGGG           CGAAGGCGATAGAAC 100 52
APT61_RS05110 1073001 .. 1073023 -  -4.7  -2.69433   GAAGTAGACGAGAAG           GCTCATGCC CGGGC GGCCTGTGC           TGGCTGCGGCAGGCG  46 5
        nrdI NONE
APT61_RS05100 NONE
APT61_RS05095 1069482 .. 1069496 -  -4.2  -3.02829   TACATTCGCTCAACA               TCTCGC TAA GCCAGA               TTCTGGATAACCCTC  47 39
APT61_RS05090 1068701 .. 1068715 -  -9.2  -5.13354   CTGATAAAAAATAAA               CCCGCC CTG AGCGGG               TTTTTTATTGCCTGA 100 119
APT61_RS05050 1058522 .. 1058533 -  -4.4  -3.58905   ATTTCTCATACATAA                CAAC CAAT GTTG                 CCAGCGTATAAAAAT  52 134
APT61_RS05040 1056211 .. 1056223 -  -6.3  -3.45571   GCTTCTAAATATGAA                GCTAA TTT TTAGC                GAATTGGCTTAAAAC  61 34
        hypA NONE
APT61_RS04975 NONE
APT61_RS04970 1043986 .. 1044005 -  -2.8  -2.84841   CGTCAACAAAACGCA            TCAGCG-GG CCT CCTCGCCAA            ACAGCAGCGGGCCGA  42 6
APT61_RS04965 NONE
APT61_RS04960 NONE
APT61_RS04955 1039465 .. 1039477 -  -7.7  -2.80443   CCATACCCTATCATA                CTCAG AAT CTGAG                ACAACCCTGAATTGG  59 274
APT61_RS04950 NONE
APT61_RS04945 NONE
        proX 1035845 .. 1035900 - -29.9  -2.95068   GAAGATACTCAGATA CCCTCTCCCCTGAGGGAGGAGGGTA ATCAAG TTCCCTCTCCCCTCAGGGGAGAGGG TTAGGGTGAGGGGAA 100 52
APT61_RS04935 1034356 .. 1034389 -  -5.3  -2.51872   GTCACCATAACAGAC     TGAGGGGTTCCTTAA CACC CTAAGAAACCCCAAA      CTTATGTAAACCTTA  48 38
APT61_RS04930 1033490 .. 1033513 - -13.9  -3.96327   ACCTGTTATCAGAAA          GGCCAGCAC TGTGAT GTGCTGGCC           TGTCGGTTTTCTTAT 100 71
APT61_RS04925 NONE
        emrB 1030652 .. 1030671 - -12.2  -5.67063   GCGAGCATAAAAAAA            CGGATCTG CATG CAGATCCG             TTTTTGTTTTCAGGC 100 48
        srlR NONE
APT61_RS04835 1017589 .. 1017604 -  -7.5  -3.32946   CGCTGAAGCAGAACA              GCCGC AGCTGG GCGGC               GAGCGCAAGGGCGCT  58 95
APT61_RS04825 NONE
APT61_RS04820 1013324 .. 1013341 - -14.1  -5.69068   TAAAAATACAAAAAA             GCCCCGG GGCA CCGGGGC              TGCGAAAGGCAAAAT 100 79
APT61_RS04815 NONE
APT61_RS04810 1009145 .. 1009165 -  -3.1  -3.89346   CTTTCAGGCTACAAA            GACGCGCTG GCG CAGCACCGC            ATTCCGCTGCGCGAG  55 413
APT61_RS04800 NONE
APT61_RS04795 1005301 .. 1005317 -  -8.1  -3.04931   TTATACAACGATATA              TTCATTG TGT CAATGAA              TGATGGTAACGTGAT  60 108
APT61_RS04790 NONE
APT61_RS04785 NONE
APT61_RS04780 NONE
APT61_RS04775 1000840 .. 1000862 -  -4.8  -4.56775   ATCGCGCGCGAAAAA           GAGACCATCC GCA AGATGATCGC           GCTGTATGAAAAGCA  72 322
APT61_RS04765 NONE
APT61_RS04760  997670 ..  997714 -  -6.5  -2.79183   GCGATGTTCATCACA GCTCACG-CAGGCCCGGCAAGCG TAG CGC-CGCCGGGCGTGTCG-GA-C TTATACCAGATTCTT  54 26
APT61_RS04755  997203 ..  997222 -   -15  -5.08824   TTTTCATCCAAAAAA            GGCCCGTC TCTC GACGGGCC             TTTTTCTTTGGTTAT 100 37
APT61_RS04685  984711 ..  984738 -  -7.6  -2.93393   GTTCAGCCGATAAAT        CGTCTTCCCCGC CTTA GCGGGGATAACC         CACGAATAATCTTAC  60 93
APT61_RS04670  983157 ..  983173 - -10.8  -3.38522   CAAAAAAAGATTTAA              GGGCGG ATTAA CCGCCC              CTTTTTTTATGCTGT  78 32
APT61_RS04650  977856 ..  977872 - -13.7  -5.75945   ATTGCTTAAAAAAAA              GCCCGGT TAA ACCGGGC              TTTTTTTTACTCGCC 100 32
APT61_RS04640  975683 ..  975696 -  -9.5   -4.8543   TAATCTTTAGAAAAA               CCCGC TTCG GCGGG                TTTTTTTTTATCATC 100 39
APT61_RS04610  965105 ..  965142 - -13.5  -2.74605   TCTTCTGAAAATTTA   TACCCCCGGCTCCCT TTATCTTG AGGGAGTCGAGGGTA    AAGGGGGAACTCAGG  84 36
        queF  955620 ..  955637 -  -9.8  -3.85389   CTTTAACAACCCAAA             GCGCGG AACGAA CCGCGC              ATATTGTGAATTTAT  79 46
APT61_RS04555  954114 ..  954140 -  -6.6   -5.5074   GAAGGCAATAAAAAA        GCCGGG-A-GGC AAAGG GCCATTCCCGGC        TGGAGCTGGCACCCG  93 62
APT61_RS04550  952316 ..  952337 - -11.5  -2.53271   GTATTGGGAGAAGAG           TGCGCCGTC CGAA GACGGCGCG            GGAGGAATTAAGCGA  75 33
APT61_RS04545  950885 ..  950901 -  -6.5  -2.71731   GGCATTCGGGAAGGA              GCCTCGC AAA ACAAGGC              TCCTTTTTAGGCTTA  53 38
APT61_RS04540  949977 ..  949995 - -10.3  -2.85351   TTCCCTTACACCACA             CCTCTCC CATCT GGAGAGG             GGATCGTGACTCCAT  71 73
APT61_RS04515 NONE
APT61_RS04510  944733 ..  944758 -  -4.5  -4.15044   TGTCGTCGTAATAAA         GTGCCGCTGGT CACT ACCGGCGGAGC          GGGCGGGCAGATCGA  64 359
APT61_RS04495  942805 ..  942822 -  -2.7  -4.58663   ACTACTTCGCAAAAA             TTTCTAC TGTC GTAGAAG              GTACTTCATCAAATT  65 46
APT61_RS04490 NONE
APT61_RS04485  942441 ..  942454 -  -8.1  -5.76633   TCAGATACAAAAAAA               CACCC GGAA GGGTG                TTTATTGTTTTTAGA 100 46
APT61_RS04475  939530 ..  939556 - -11.6  -4.10007   ATAAGCCTGTGAAAA        GCCGGGC-AGC GCTTGT GCTCGCCCGGC         CTGGCATCCTGACCC  91 41
APT61_RS04410 NONE
APT61_RS04405  919426 ..  919457 -  -9.6  -5.09762   AGGGGAAGAGAAAAA      TCA-AAAGGCCAGCA AGC TGCTGACCTTTACGA      CTATCTTTCAATAAT 100 26
         tas  918028 ..  918047 - -16.4  -3.35679   CGCGGGGATTGACAA            GGGGGGCC CGGC GGCCCCCC             TTGTCACGTTCACGG 100 139
APT61_RS04385  912004 ..  912024 -  -3.1   -3.1855   GGTGTGAAGATCCAA            CCGCTGTAC GCC GTCCCGCAG            CATGCGGAGCAGGTG  45 430
APT61_RS04360  906881 ..  906908 -  -7.6  -3.71649   GTGGGAAAGTGGAAA        CCCGCGCACTGCC GCA GGTGGTGC-CGGG        GGATTATCTGGTGCT  66 158
APT61_RS04350  904666 ..  904702 -  -5.2  -2.87132   CTTTGGCTGCACAGA   GATCGGCCTGCTGATCC CGGC GGATGAA-AGCCCGATC    CCGGTGTTCGATACC  48 72
APT61_RS04340  903584 ..  903601 - -11.3  -5.24129   GGCGCGGACAAAAAA             GCGATGC CGAA GCATCGC              CTTTTCATTATTTCA 100 33
APT61_RS04335 NONE
APT61_RS04330 NONE
APT61_RS04325  900267 ..  900277 -  -3.2  -3.31144   TTTTCATTTTTATAA                 CTCC ATT AGAG                 AGAGATGTTCTGTTC  48 20
APT61_RS04320  898927 ..  898951 - -12.9  -5.71712   CTTCAGATAAAAAAA          TACCCCACCGC GGA ACGGTAGGGTA          TTGATAACCTAAGCT 100 43
APT61_RS04315  897689 ..  897714 - -18.3  -2.64099   GCGTGTGAGGATAAT         GCCCGGCG-GCG CGT CGCTCGCCGGGC         CTGGAAGGTCAAAAG 100 86
APT61_RS04295  892611 ..  892629 - -11.7  -6.02914   CGCAGATAAAAAAAA             GCCCTCC ATAAA GGAGGGC             AAGGCCAGTTACAGG 100 58
APT61_RS04285  891535 ..  891552 -  -8.4  -3.68936   TATCAACCCCAATAA             GCCTCC CGTCGC GGAGGC              TTATTTGTTTGTGAG  71 93
APT61_RS04275 NONE
APT61_RS04270  888087 ..  888115 - -16.8  -4.15565   CCCAGTACTGGAAAA        CCCCGCCCTTCA GCCTG TGAAGGGCGGGA        TAGCATTACTTGCCG 100 31
APT61_RS04255  886023 ..  886049 - -10.8  -2.52464   TTGGCGCTGAAGGGA         GCGGGCCGGAAA GCA TTTCCGGCCGGA         GGGATTAAGACGTGG  72 30
APT61_RS04250  884672 ..  884695 -  -9.6  -3.06261   GCTTAACGTTGAACA          GCACGCTG CCGCAAAC CAGCGTGC           TGCCTCCTGGTCAGG  69 36
APT61_RS04235  883313 ..  883342 -  -7.9  -3.23216   CCTGATCATGATTAA       GCAT-GGCGAGGAT TAC ATCACCGCCTATGC       GCATAATGACACTCT  59 393
APT61_RS04220  882017 ..  882041 -  -9.9  -3.98661   CACAGCTACCAGAAA          GCCCCGGCG TTAATCG CGTCGGGGC          TTTTTTATTGCTTCG  81 30
APT61_RS04190  874802 ..  874815 -  -9.5  -2.84098   CTGGTTAATGAATCA               CGGCG AACC CGCCG                ACGCCGAACTGCAAC  61 495
        ygfZ  873279 ..  873298 - -12.2  -4.93696   CGCAAACATTAAAAA            CGGTAACC CTGG GGTTACCG             TTTTGCTTTTACCTT 100 62
APT61_RS04160 NONE
APT61_RS04155  869670 ..  869694 - -12.2  -3.90744   GCGGGCGGGAAATAA         CCCTCTCACCC CAAA GGG-GAGAGGG          GATCAATCGTAGGCC  91 70
APT61_RS04130  863674 ..  863699 -  -3.9  -3.53012   CTCCCGGGTGTTAAA         CCACAGCTCCTG CGT CAGGCGATG-GG         TCTTAACGATCTACC  51 186
APT61_RS04105 NONE
        ssrS NONE
APT61_RS04095  857798 ..  857817 -  -4.3  -4.29738   GCACATTCATGAAAA            CCGTCCAG GCGTA CTG-ACGG            CCATTAACCAGATCT  65 292
APT61_RS04080  854756 ..  854782 - -11.6  -2.62326   TAAGCACAAATACAG        GCCGGGTTCGC GTTAAT GCGA-CCCGGC         TTTTTTATTAATCCT  75 33
APT61_RS04040  845126 ..  845151 - -15.5  -4.70887   CGAGTAATAAAGAAA         CAGGCCGGGACA GGT TG-CCCGGCCTG         ATGATCGCTGTTACT 100 36
APT61_RS04025  839961 ..  839979 - -11.7  -5.45802   CGCTTAAAACAAAAA             GGCCAGC ACGGG GCTGGCC             TTTCAGAAAGACTGT 100 48
APT61_RS04020  838325 ..  838346 -  -2.2  -3.28712   GGGGTGTTTTCATAA           CGGCAGAGC ATAGA GC-CTGTCG           CGGAGCGGTGCAAGC  45 74
APT61_RS04015  837839 ..  837850 -  -3.6  -3.29511   CTTACTCCGCCATAA                GCGG TTCA CCAC                 ATCTCACACAGCGGT  48 0
APT61_RS04010 NONE
APT61_RS04005 NONE
APT61_RS04000  835152 ..  835192 -  -9.8  -4.56597   TTCCTGGTTTAAAAA GCGACAGCACCC-AGTATG CGTA CAAACCCGGATGCTGTCAC  TAACAGTATTGGCTG  91 46
APT61_RS03995  834549 ..  834570 -  -2.9  -3.40784   AATCAAAGGCGAGAA           GCGTGCC GCTCATCA GGCATGC            CCCGCTACGCCAGGC  47 16
APT61_RS03990  834110 ..  834137 -  -9.8  -2.73309   CTGGAACAATAAGAG        GTCTTTGCCCGG GAAG CCGGGCAAAGGG         AAGGGGGTCAGTAAC  66 33
APT61_RS03975 NONE
APT61_RS03970 NONE
APT61_RS03965 NONE
APT61_RS03960 NONE
APT61_RS03955  828982 ..  828998 -  -6.5   -3.4252   CCTCAGCCAGCAGAA              CGGGATG CAA CATCCTG              AATCAGGCTTCAGGA  59 35
APT61_RS03950  828530 ..  828545 -  -6.8  -2.60763   CTCACAGGGCAGAAG              GAGCAG TTTG CTGCCC               GAGGTGAGCCCAGGT  53 62
APT61_RS03930 NONE
APT61_RS03925 NONE
        mltC  823485 ..  823518 - -13.4   -3.1875   GACAGGGGAAGTGAA     TC-TTTACCCTCTCC GGGGA GGAGAGGGTAAAAGA     GAGAATGTTACTTTC  88 33
APT61_RS03915  821998 ..  822022 - -15.8  -5.64006   ATTGAAGTAAAAAAA          TTCCCCCCTC AGCAG GAGGGGGGAA          CGTAACAGATTAATG 100 35
APT61_RS03905 NONE
APT61_RS03900  818534 ..  818549 - -10.4  -5.42514   CCAGAAAGCAAAAAA              CCAGCC CTAA GGCTGG               TTTTTCTAAATAGTG 100 39
APT61_RS03865  808028 ..  808054 -  -4.3  -2.90212   TGATCATTTCACATA         TGCTGACGACC TACCG GGCGGTCAGCG         TCAGTCGTGAACAGG  44 204
APT61_RS03850  803521 ..  803540 - -12.8  -5.73339   AGAAGCATAAAAAAA            CGGGGCCA CTCA CGGCCCCG             TTATTATTGATAACA 100 42
APT61_RS03845  802640 ..  802658 -  -2.2  -3.41051   GTATGCCGACGAGAA             GCGCCCGC GAT GCAGGAGA             TCGCCCCAGGCCATT  46 158
APT61_RS03815  796109 ..  796125 - -12.3  -4.40173   AGGATAAATGCAAAA              CGGCAAC AGG GTTGCCG              TTAGAGGTGTTTGCA  95 78
APT61_RS03800 NONE
APT61_RS03795  792462 ..  792479 -  -5.5  -3.70773   CGCCAGACCGAAGAA             CTGCAAC GCTC GGTGCAG              AAGTTCCGCCTGGCG  59 43
APT61_RS03785  787818 ..  787844 - -22.4  -3.52652   TTGAGTTAACCAGAA         TGTCCGGCAGCC TCG GGCTGCCGGACA         GGCGTGGTCATCAGA 100 36
APT61_RS03775  785589 ..  785599 -    -4  -4.62783   TATGGACGCCAAAAA                 TATC CCG GATA                 ACAAACTGATGTGGT  70 227
APT61_RS03760 NONE
APT61_RS03755  783604 ..  783620 -  -3.7  -2.64794   GGGAATTGCAGATTA              TTCAGGA TAA TCCTTAA              ACCAACAGCAACAGG  42 62
APT61_RS03750  782538 ..  782555 -  -5.5  -5.19819   AAATAAAAGCAAAAA             GGGCAAC GTAA GTTGCCT              TTTTTTATGGTCATT  85 111
APT61_RS03730  779778 ..  779790 -  -3.3  -3.65201   TAATATCTTGAATAA                CAGCC ATG GGCTT                TCCTGTGGAACAGCA  53 161
APT61_RS03725  778932 ..  778950 -  -6.7  -3.75169   CACGACGGCATGAAA            GCCAGCGC GGCC GCGCTG-C             GGGTGGGCTATGAAA  61 200
APT61_RS03715  776796 ..  776806 -  -3.2  -4.62471   GGTAAGCGTGAAAAA                 TCAC TTA GCGA                 GCGGCCTCGTAAATA  66 19
        dkgA  775832 ..  775856 -   -15  -4.39166   GCTTATAGATTAAAA          CGAGCCCGGC GGAAG ACCGGGCTCG          TTTGAGGCATTACCC 100 35
APT61_RS03675 NONE
APT61_RS03670 NONE
APT61_RS03665 NONE
APT61_RS03660  764166 ..  764190 - -13.5  -5.63504   AAGGTGATAAAAAAA          GCCCGGTAGCG TTA CGCAACCAGGC          TTTCGATGTGGTGCC 100 124
APT61_RS03655 NONE
APT61_RS03650  763075 ..  763107 -  -8.4  -5.03314   TGTACTGGTAAAAAA     CG-GCTGGGGTGAGG ATAT CACCACCCCAGCACA      TCTTTGATGACCCGC  93 10
APT61_RS03630  757697 ..  757712 -    -9  -5.10154   AGGTAAAAGCAAAAA              GGCAAC CCAG GTTGCC               TTTTTTAATGTTTGC 100 77
APT61_RS03600  751577 ..  751601 - -15.7  -3.85698   CTGCTCGTTTATAAA          CCCGACCTGGA GAA CCCAGGCCGGG          TATTCGCATCAGTTA 100 34
APT61_RS03595 NONE
APT61_RS03590  749548 ..  749566 -  -6.6  -3.87075   ATCAGGCCGCACAAA             CCCAGACT GGT AGGCCGGG             CAGGCGAAGTCGCTA  66 55
APT61_RS03580  747699 ..  747726 - -14.2  -5.24796   TGCAGATAATAAAAA        TTGCGCTCCCCT GACA AGCGGAGCGCAA         TCAATCAACCGATAC 100 30
APT61_RS03575  746686 ..  746710 - -15.9  -3.28217   TAAAAGAATACGTAA          TAGCCGATGAA TCC TTCATCGGCTA          TTATTAAAGGCGATA 100 50
APT61_RS03570  744139 ..  744149 -  -5.4  -2.60244   TCCTGAATTAATGCA                 CTGT ATT ACAG                 GGTAATAAGATGGCT  48 7
APT61_RS03565 NONE
APT61_RS03560  742275 ..  742306 - -15.4  -3.53444   TGATTGGCGCTGAAA      TGAAAAAAGCCGGGC AAT GCCCGGCTTTTTT-A      CGTCACGCAATCACT 100 36
APT61_RS03550  740873 ..  740890 - -11.3  -4.93696   CGCAAACAGTAAAAA             CGGCAAC CCAG GTTGCCG              TTTTGCATTCACTTC 100 73
APT61_RS03530 NONE
APT61_RS03525  732619 ..  732631 -  -3.4  -2.78384   CGGGTCTGGACGATA                TGAC CTACC GTCA                GGCGTTTATGATTGG  41 391
APT61_RS03510 NONE
APT61_RS03505  729388 ..  729398 -  -5.4  -3.10597   TTCCCGATTTAAAAG                 GGTA ACC TACC                 GATAATCCTCAGCAT  52 21
APT61_RS03500 NONE
        ureA NONE
        ureB NONE
        ureC  725523 ..  725535 -  -5.5  -3.97088   CCTCAGAACAGGAAA                TAGCG TTG CGCCA                TCGGCAGAACCTCTG  64 0
APT61_RS03480 NONE
APT61_RS03475 NONE
APT61_RS03470  723806 ..  723816 -  -3.2  -3.08465   ACTCAGACATAGAGA                 CTCC TCA GGAA                 CGGAATAACCGTGAA  45 19
APT61_RS03465  723160 ..  723178 - -12.4  -3.06969   TAACTCAGCGCAACA             GCCTGGCA TTG CGCCAGGC             TTGTTTACATCTTCA  81 30
APT61_RS03460  722222 ..  722255 -  -7.5  -4.20516   GCCTGATGGAAGAAA     CCCGGATGTTAAA GCGCCATA TCAAACATCCGGG      TTTTCGCTAACAGAC  73 0
        rpsU  720670 ..  720696 - -10.9  -4.40882   CATAAACGAAAACAA        GCCGCGCATTCC TTCC GGAA-GCACGGC         CTTACGACTACTACT  91 76
        dnaG NONE
APT61_RS03440  716804 ..  716833 - -14.5  -4.45738   CATGGGAAGAAGAAA       CAAAAAAGCTCCC CGAA GGGAGCTTTTTTA        CGTTCGGGACAATTA 100 38
APT61_RS03430  715738 ..  715755 - -11.3  -5.86976   TGAGAAAACAAAAAA             GCCACTC GTTA GAGTGGC              TTAATTATATGATTC 100 54
APT61_RS03360  701180 ..  701205 -  -4.7  -4.72497   CACGCAGCAACAAAA         CATCAGG-CTGC AGC GCAATCCCGACG         GAAGTGGCTATGAGC  76 328
APT61_RS03300 NONE
APT61_RS03295  692677 ..  692692 -  -3.2  -3.64685   AAAACGCTTTAATAA              GAATCG GAAG CGAGTC               AAATATTAATAAAAT  52 92
APT61_RS03235 NONE
APT61_RS03230 NONE
APT61_RS03225  682548 ..  682564 - -10.9  -3.70919   TGTAAATTTTAAGAA              GGGCATT TTA AATGCCC              TGATTTTAATCGATT  81 31
APT61_RS03215  679774 ..  679803 -  -5.7  -3.55444   TCGGGATTCTGGAAA       GCGCC-TCGCAA GACTGAA TTGCGGTGGCGC       TTTTTGCTTTCTGTG  59 230
APT61_RS03170  666178 ..  666193 -  -6.1   -3.4252   CGCCATCGATCAGAA              GCTGG TGCGTG CCAGC               GCTTACTGGCACGCC  57 47
APT61_RS03160  664168 ..  664181 -  -2.3  -3.95584   GCCTGATTAACGAAA               CCTCC AACC GGATG                TCCGACATCATCAAC  56 511
APT61_RS03145  659258 ..  659268 -  -4.6  -3.28712   GGTGCTGGCGCATAA                 GCAG ACC CCGC                 ATTACAAGGCGTGCG  49 201
APT61_RS03110 NONE
APT61_RS03105  650621 ..  650650 -  -8.5  -4.58395   GCGAGGGGGGAAAAA       CCGCAGGGGACAG TTCC CTCTCCCCTATGG        GGAGAGGGTTAGGGT  83 241
        fadH  647917 ..  647944 -  -2.6   -2.6155   TGCCTGAAGATCAAC        GGCGAGCTGTACA TTG TGGCCAAC-CGCC        ACCTGGACTATTTCC  38 370
APT61_RS03090 NONE
APT61_RS03085  644902 ..  644927 -  -7.5  -5.75538   CGTAAAAAACAAAAA         CGGCTAGGGTC AGAA GACGATAGCCG          TTGCGTTTTTTATGC 100 248
APT61_RS03080  643783 ..  643801 -  -4.7  -3.06261   GCGCAAGGCGGAAGA             GTAAAAT GCTGG ATTTTAC             GTGTCACATCATATT  49 127
APT61_RS03075  642394 ..  642414 - -18.3    -4.371   CTTACGATAGTAAAA            GGCCCGGTC ACT GACCGGGCC            TTTTTTATTAGCTGC 100 33
APT61_RS03060  637553 ..  637568 - -11.8  -5.03314   TTGACCCGCAAAAAA              GCCGCC CGGA GGCGGC               CTTTTCATTGCCGGG 100 106
APT61_RS03055  636363 ..  636387 -  -7.2  -3.05775   AGTATTCCTGAAAAT         CGGTTAAC-GG CACG CCTGTCAACCG          GGTCAAACAGCACGG  59 335
APT61_RS03050 NONE
APT61_RS03045  635252 ..  635265 -  -4.5  -3.98683   AGCATAGTAAGTAAA               CGGTG ATAT CACCA                AAGTGAGTGAAAAGA  62 58
APT61_RS03040  634782 ..  634796 -  -3.4   -2.5934   CGTTAAATCAGTAAT               CGCGAG ACT CCAGCG               CTTTCAGCTCGTTCT  42 3
APT61_RS03035  634441 ..  634453 -  -4.1  -2.58579   TGAATCTTCCATAAT                TAACG TCG CGTCA                GGAGCATGCCGATGA  44 12
APT61_RS03030 NONE
APT61_RS03025  633683 ..  633706 - -15.4  -5.40072   GGCGGCGTAAAAAAA          GTAAAGCGCC AGAA GGCGCTTTAC           CGGGTGAGGCAGAGA 100 47
APT61_RS03020  633071 ..  633090 - -13.6  -4.39166   CCTTAGATAGCAAAA            GCGAGGAG ATAT CTCCTCGC             TTTTTGATTCAGTAT 100 48
APT61_RS03015  632034 ..  632052 - -12.4  -3.63589   TAAAAGAGGGGTAAA             GGGCGCCT GAG AAGCGCCC             CTGGAGGTTTAGCCG  88 34
APT61_RS03010  631544 ..  631554 -    -4  -3.28791   ACTGTTCGTTCAGAA                 GTAA TCT TTAC                 GCCCGGCAAGCGCAG  50 58
APT61_RS03000  629812 ..  629842 - -12.7  -3.48276   GGCGTCCTGATATAA      CG-CTCCTCTCTCC TGAC AGAGAGAGGAGACG       TTTTACACCGGCAAA  89 28
        garD  609876 ..  609893 - -11.3  -6.17292   AAAGGCAAAAAAAAA             GCATGGC CGGA GCCATGC              TAAAGAGGTTTACTG 100 46
APT61_RS02915 NONE
APT61_RS02910 NONE
APT61_RS02905 NONE
APT61_RS02900 NONE
APT61_RS02890  603588 ..  603602 -  -2.7  -3.06302   ATGAGCGGCAGGCAA               GCCAG GGTCG CGGGC               ACCGTCAACGGACAG  41 245
APT61_RS02880  602808 ..  602835 -  -8.4  -4.25104   GGCGGTGGATGAAAA        CTACCGCGGCCAG GGC CTGGC-GCGTCAG        CTGGTCTACGAAGGG  78 243
APT61_RS02865 NONE
APT61_RS02860  599903 ..  599914 -    -3  -3.39521   TGCATCAAAATTTAA                TAAC CGTT GTTA                 ACAAAGTGAGCTTTT  47 52
APT61_RS02855  598771 ..  598810 - -12.2  -3.21099   CCTGTTTACCAGTAA  CGCTCCTCACTCCTCTCCC AAC GGGAGAGGAA-GATGATCG  TAGGCCGGGCAGGCG  82 60
APT61_RS02795  583406 ..  583421 - -11.8  -5.72622   CTCAGAAACAAAAAA              GGCGCC CTCA GGCGCC               TTTTGCATTTCGGTA 100 47
APT61_RS02760  577135 ..  577149 - -12.8  -4.90217   TAAAGATAGGAAAAA               GGCCGC ATA GCGGCC               TTTTATCAACTCAAG 100 117
APT61_RS02750 NONE
APT61_RS02745 NONE
APT61_RS02740  572821 ..  572837 -  -6.5  -3.91506   CGAGCTGGAAAAATA              CAGCGAG AAG CTGGCTG              AGAAGCCACGCTGGC  64 415
APT61_RS02715  569086 ..  569108 -  -5.6  -3.27022   TGGAGCTTACAGGAA           CTCTCTTGTC AGA AAAAAGAGAG           TTCCCCTGGCCGTTA  54 38
APT61_RS02710  568599 ..  568618 -  -7.8  -2.72144   CTATCCCGTTTAAAG            GAGCGTCA TTAT TGGCGCTC             TTTTTGTTGTCTTCT  58 14
APT61_RS02670 NONE
APT61_RS02665  561557 ..  561572 -  -6.8  -2.78816   TTATCCTTCATTACA              CTACGC CTGC GCGCAG               CAGATCATGCATATG  54 5
APT61_RS02660 NONE
APT61_RS02655 NONE
APT61_RS02650 NONE
APT61_RS02645 NONE
APT61_RS02640 NONE
APT61_RS02635  557279 ..  557303 - -16.5  -2.95192   GCTAACTGTACAAAG          GGCCCGTTGTG TTT CACAACAGGCC          AACCTGCACCCGTTA 100 54
APT61_RS02630  556737 ..  556751 -  -4.2  -2.82516   CTCCTCAGGACTACA               GATGTC AAA GCCATC               ACCCGATTACGCATC  45 32
APT61_RS02625 NONE
APT61_RS02620  555416 ..  555443 -  -3.4  -3.87815   CGCTATTTCCATAAA        CCTGCGA-GCCGA CTG TCAGCATCAGAGG        CCGCGCTACTGGCCG  55 171
APT61_RS02590  547475 ..  547500 - -11.1  -3.85909   GGATTTAAATGCAAA         GCCGGGT-GGCG CTG CGCGTACCCGGC         CTACGGTTAAATGCC  85 85
APT61_RS02585 NONE
APT61_RS02580  544108 ..  544133 - -15.5  -3.44284   TTTTCAGGAAGAATA         CCCCTTACGCC CTGA AGCGTAAGGGG          GTAACGCTTTACAGC 100 34
APT61_RS02575  543521 ..  543531 -    -4  -3.58914   GGAAAGGAATTACAA                 TGTT TTC AACA                 TCCGCACTTCGCAGT  52 9
APT61_RS02570  542348 ..  542375 - -15.8  -3.05046   GCAGCGGGGTAAAAG        CAAAACGGTAAC AACC GTTACCGTTTTG         AATGTTACAGGCGCA 100 62
APT61_RS02560  538749 ..  538764 -    -6  -3.58522   AGTATTATGGCCAAA              GCCTGG GAAG CCGGGC               GACTCAACGGCATCG  58 300
        gltB NONE
APT61_RS02540  531335 ..  531356 - -17.3  -5.66868   AAGTAAGCAAAAAAA           TGGCCCGGC ATTT GCCGGGCCA            TATTCATTACACTTC 100 32
APT61_RS02495  522615 ..  522635 - -14.7  -3.10958   GACGGGAAGAAAGGA            CGGGCGCAA GGG CTGCGCCCG            TAAAATTTATTTATG  91 49
APT61_RS02490  521074 ..  521123 -   -13  -2.86343   ATCGCAAGCAGCATA GCATG-ACTTATCCGGACATCAC ACGGG GTGATGTCCGGATGCGTACAGGC TTAACGCAGCAGAAT  81 26
APT61_RS02485  519931 ..  519948 - -12.7  -5.46657   CAGGGCAATAAAAAA             CCGGAGC AATG GCTCCGG              TTTTTTTATGTCTGC 100 45
APT61_RS02475  518054 ..  518080 - -14.5  -3.01712   GGCGGGCGCCGAAGA         TTCCCCGCTGC GATGT GCAGCAGGGAA         GAGGATCAGAGTTCC  91 31
APT61_RS02470 NONE
APT61_RS02465  517020 ..  517038 -   -16  -6.17292   AAAGGCAAAAAAAAA             GCCCCTGC GAG GCAGGGGC             AAGTCGTAGGTCAAT 100 52
APT61_RS02440  510810 ..  510823 -  -3.1  -3.90744   GTCTGCGGTAAAGAA               GGCCAG AGC CTG-CC               AGTGGGCGTGGGTCA  55 132
APT61_RS02395  497458 ..  497480 -  -2.6  -3.15768   ACGAAAATTTGAAGA           TTACGCCAGC TTC ACCAGCGTAC           GGCCCTGGATCTGGT  45 3
APT61_RS02390  496390 ..  496402 -  -2.6  -2.70788   GCACTTAGAAAAACT                CCCG TAAGT CGAG                GCCGCGATAGAGTGA  41 2
APT61_RS02385  495742 ..  495770 -  -4.6  -2.53701   TAAATACTCAGGAAG       GGTGAGCG-ATCT GTGG AGATTCGCCCACT        TTCGTCCGTTATCGC  46 34
APT61_RS02380 NONE
APT61_RS02375 NONE
APT61_RS02370  493204 ..  493220 - -10.8  -4.63048   CCCAGAAATAATAAA              GGCCGG ATTAA CCGGCC              TTTTGCTGCTTATAA 100 45
APT61_RS02365 NONE
        panF NONE
        prmA  490525 ..  490546 - -15.9  -3.82218   ATTCAGACGAGGAAA           GGCGTGGTC AGAG GACCACGCC            AAAGGCTTATTTTTT 100 32
APT61_RS02350  489591 ..  489611 - -14.1  -3.29043   AATTCTCCGGGATAA            TCTGCTGCT ATA AGCAGCAGA            TTATGGTGCATCTTT  93 89
APT61_RS02345 NONE
         fis  488005 ..  488020 -  -2.4    -5.626   GAGGGCATAAAAAAA              GGCGCG TCCC CATGCC               GGTTTGCGCCTTTTT  83 65
APT61_RS02335  485351 ..  485367 -  -2.2  -4.72272   CGGGCTGATTAAAAA              CTGGTT AATGA AACCGG              AAAGGCTGGACCTGT  70 144
APT61_RS02325 NONE
APT61_RS02320  480140 ..  480161 - -13.1  -3.23216   GTTTATTATCATCAA           TAAAGGCGC CGAA GCGCCTTTA            TCTATTACTGTTCTT  84 30
APT61_RS02315  479599 ..  479616 - -11.3  -4.55128   ATCGGGAAAGCAAAA             GCGCGAA CGAA TTCGCGC              TTTATGGATTACTTA 100 34
APT61_RS02310 NONE
APT61_RS02305  476948 ..  476958 -  -2.4  -2.71731   CTTAGCGTTCAACCA                 GCGC GAT GCGA                 CGGTTATAGATATTC  39 1
APT61_RS02300 NONE
APT61_RS02295  474948 ..  474967 - -13.6  -4.39407   TCAAATAAGTGAAAA            GGCCATCC GTAA GGATGGCC             TTTTTGCGTTATGCG 100 113
APT61_RS02255  468468 ..  468488 -  -2.5  -4.30576   GTGGGACGACGAAAA            GCGGG CCGTCTGTTTT CCCGC            TCTGGTGAACGGCAT  62 179
APT61_RS02235  466517 ..  466542 -  -7.5  -3.31915   GGTGCACAAAAATGA         GCCATG-CCCGC AGT GCGGGGCAGAGC         TTGTAATCCGGTCCG  62 67
APT61_RS02220 NONE
         fmt  463239 ..  463257 -  -7.3  -5.61881   CCGCAAAAATAAAAA             TGCCCGG AAACA CCGGGCC             TTAAATGGAGATGAT 100 42
APT61_RS02210 NONE
        trkA  460509 ..  460526 - -11.3  -5.60993   TGGGTTATAAAAAAA             GGTGCTG ATAA CAGCACC              CTTCAGGCATTACAG 100 35
        mscL  459798 ..  459816 -  -3.9  -2.89837   AGGGCAAATCAACGA             TAACGCT ATTGA AGCATTA             TTACATGATCCTTTA  45 182
APT61_RS02050  443986 ..  444010 -  -5.8  -4.10953   ATTGATGAAATGAAA         CACGC-CGATA AGTA TATCGAGCGTA          TTTTGTTCCTTGAGG  66 302
APT61_RS01990  435626 ..  435641 - -10.4  -5.28176   TTCAGGCACAAAAAA              GCGGGA TTAA TCCCGC               TTTTTTTACGTCTCA 100 38
APT61_RS01965 NONE
APT61_RS01960  429012 ..  429027 -    -4  -3.93262   GCGAACAAAGCCAAA              CGACTGA CGG TCAG-CG              TGCCGTCGCACTGCG  57 368
APT61_RS01915 NONE
APT61_RS01910  420795 ..  420812 -  -6.9   -2.6732   CCTGAATGGAAAGAG             GTCGCGG TTAA CCGCGAA              ATTGATTGCGAGGCA  53 15
APT61_RS01905  419825 ..  419836 -  -3.6  -4.37658   AAGCCCCGGATAAAA                CGCC GGGC GGCA                 GGTCGTTTGCCCGGC  63 91
APT61_RS01895  418420 ..  418459 -   -18  -3.01416   CATGAGTGATAGAGA  CAAAAACGGCGTGTCATC ATGC GATGCCACGCCGTTTTAG   CGGAATTAACGTGTT 100 31
APT61_RS01890  416292 ..  416311 - -12.2   -5.4251   CGCATATATAAAAAA            CGGTAACC TGGG GGTTACCG             TTTTGCGTTTAATGC 100 34
APT61_RS01865  411397 ..  411426 - -14.4  -4.18018   GTGCTTTACCCAAAA       CA-GCCCCTCTGC AGGCA GCAGAGGGGCATG       AGGCATCAGTGAGAC 100 31
APT61_RS01855 NONE
        nirD  406978 ..  406998 - -10.3  -4.56629   GAGAACATTACAAAA            GCGGGGGCA TTG CGCCCCCGT            GTTAATCAGCCTCGA 100 31
APT61_RS01845 NONE
        cysG  404265 ..  404279 - -11.4  -6.13503   TACCAATAAAAAAAA               CCGGGA CAT TCCCGG               TTTTTTTATGCCTGA 100 352
        mrcA  391464 ..  391490 - -14.4  -2.86271   GTTGTAGCAGAAGGA         TCCCCCTCTCCC GGC GGGAAAGGGGGC         AGACAGTTAGAACAG  88 32
APT61_RS01765  388395 ..  388429 - -12.8  -4.33417   TCCAGCCAGAAGAAA     CGTGCGCGACAGGGTA GCA TATCCTGTCGCGCGGG     AGCGTTATCCGATCA 100 30
APT61_RS01760 NONE
APT61_RS01755 NONE
        hslO  386351 ..  386376 - -11.9  -4.66833   GGCGAAGGGGAAAAA         CAACTGCCCTC GGGA GAGGGCAGTTC          AGGGGAGACTTAGTG 100 35
APT61_RS01745  384365 ..  384382 - -11.3  -4.96106   CACAAACATGAAAAA             CGGCAAC CTCG GTTGCCG              TTTTGCGTTTATCTT 100 34
        greB  381497 ..  381517 -  -2.3  -4.09864   ATTGAGGCGGCAAAA            TGCCAGCCG CCG CGCCAGGCT            CTCGGATTGTTCTTG  55 45
APT61_RS01725  379054 ..  379104 - -15.5  -2.56728   ACGATCGAGAGGAAT TTCCCCTCACCCCGGCCCTCT TTCAAAAGG AGAGGGTCAGGGAGAGGGAAA GGGTATTTAGCGTTT  95 32
        feoA NONE
        feoB NONE
APT61_RS01710  375968 ..  375995 - -18.6  -3.06509   CTTCAAATAATGAGA        TAAAGCCGGGCA TAGT TGCCCGGCTTTA         CTGACGATTAACGCA 100 33
APT61_RS01695  374070 ..  374086 -  -6.5  -3.21593   TACCTGGTTATAATA              CGCCC AACCTGA GGGCG              CTACAAGGTTCGACA  57 26
APT61_RS01690  373403 ..  373417 -  -4.2  -2.78438   TATGAGAGGGGAAAG               CGGG GGAGAGG CCCG               GTAAGCGTAGCGCCA  45 61
APT61_RS01685  371774 ..  371789 - -11.8  -5.87996   GAAGTAATAAAAAAA              CCCGCC GGAT GGCGGG               TTTTTTATTGCCGGG 100 72
APT61_RS01670  363811 ..  363830 - -16.4  -3.35679   CGCGGGGATTGACAA            GGGGGGCC CGGC GGCCCCCC             TTGTCACGTTCACGG 100 186
        glpD  359445 ..  359474 - -15.1  -3.13919   GTGAAACTGTAAAAG       CAAAACGGCGACC TCAG GGTCGCCGTTTTT        GTATTTGCCCTCTCT 100 79
APT61_RS01615  347915 ..  347930 -    -9  -4.89729   GACAAAACTTAAAAA              GGCAAC TTAC GTTGCC               TTTTTGCTTTTACCT 100 39
APT61_RS01585  341743 ..  341759 -  -7.3  -4.11216   TGGCGAGGGGGAAAA              GACTGCA CCG TGCAATC              CGCTCTCCCCATAGG  71 247
APT61_RS01575  339316 ..  339349 - -18.9  -2.72991   CTATACCGTTAACCA     GCCCCAGCG-GGCAGC AGA GCTGCTGCGCTGGGGC     GTGGATTGCATCTGT 100 79
APT61_RS01520  327855 ..  327878 -  -4.6  -2.78596   GACTCCTGCATCATA          CTTCACGCTA TGAG TAGCGTAAAC           TCAGGGGGCTAGCGC  47 42
APT61_RS01515  327267 ..  327280 -  -2.3  -2.83517   ACGGACATAATATCA               CTCCA TCTG TGGCG                CTTTGGCTTCTGCCG  40 9
APT61_RS01510  325208 ..  325241 - -11.7  -3.94188   ACCGACGCTAAATAA     CGCATTATGCCCGGCG AAC CGCCGGGCATTTT-CG     TTTTACCATCCGCCG  88 28
        rsmD NONE
APT61_RS01475  318195 ..  318223 -  -9.6  -2.66316   TCGTTCACGACAGCA       GCA-GGTGACGCC AGCG GGCACCACCATGC        GCTATGAAGCGAGCT  60 239
APT61_RS01465  317227 ..  317246 - -12.2  -2.95223   TAACCGCAGCATACA            CTCTGGAG TCGA CTCCAGAG             TCAAGCGCTATTTAA  81 37
        zntA  314919 ..  314944 - -12.5  -2.62463   TGCAGTAGGGATAAT         GCCGGGC-GGCG CCG CGCTTGCCCGGC         TTACGATTTTTTATA  78 76
APT61_RS01435  310505 ..  310528 -  -7.6  -3.41602   TCCATCTTATCACAA          CT-GTTAAAGG GAA CCTTTAACCAG          CCTGTAATGCTGAGA  64 18
APT61_RS01430  309754 ..  309773 - -16.4  -3.35679   CGCGGGGATTGACAA            GGGGGGCC CGGC GGCCCCCC             TTGTCACGTTCACGG 100 143
APT61_RS01420  306745 ..  306767 - -15.6  -2.50821   GGTTGAAACAGAGAG           CGTCGGGCCA GGC TGACCCGACG           AGTATAAAATTTACC  95 79
APT61_RS01415  305578 ..  305592 -    -5  -4.21936   TCGAGAATGTTAAAA               GCAAAT TTC ATCTGC               GCGCGTCCGCGATCA  64 81
APT61_RS01410 NONE
APT61_RS01405 NONE
APT61_RS01400 NONE
APT61_RS01395  303527 ..  303543 -  -2.1  -2.90813   GATCGCCGGAAATGA              CCGTCCG CCA CGCATGG              TGTCTTACGCTTCGC  40 30
APT61_RS01390 NONE
APT61_RS01385 NONE
APT61_RS01380 NONE
APT61_RS01375 NONE
APT61_RS01370 NONE
APT61_RS01365 NONE
APT61_RS01360 NONE
APT61_RS01355 NONE
APT61_RS01350 NONE
APT61_RS01345 NONE
        fabG NONE
APT61_RS01335 NONE
APT61_RS01330 NONE
APT61_RS01325 NONE
APT61_RS01320  289865 ..  289890 -  -7.6  -3.86897   TGCACTCTTCATAAA        CCGGGTAAGGCG AAGT CGCC--ACCCGG         TTTATTTTACGGCTT  70 32
APT61_RS01305  285645 ..  285666 - -13.7  -5.81412   TGCAGGCAAAAAAAA           GCGGGCCAG TGAC CTGACCCGC            TTTTCGCGTTATCTG 100 48
APT61_RS01300  284981 ..  285005 - -11.4  -3.61178   GCGATTGAGCGCAAA          GGAAGGCGGG TATAG CTCGCCTTCC          TTTTGCCACCCATCA  83 38
APT61_RS01290  283746 ..  283756 -  -6.8  -3.28712   CCGCCGCTGGCAGAA                 GTCG CGA CGAC                 CAATGCGGTGGTGAC  56 177
APT61_RS01275  279940 ..  279956 -  -3.7  -3.63805   ATTGTATACCTGAAA              TCAATAG TTT CCATCGA              TGACTGCGATTACTC  53 35
APT61_RS01270  278489 ..  278506 -  -6.2  -5.88197   TGAAACATAAAAAAA             CCGGCC ACTGAG GACCGG              TCTTTATAAGCGCAA 100 62
APT61_RS01265  277727 ..  277741 -  -5.6  -3.77808   TCCACTATAACAGAA               CTGCAG GGG CTGCTG               GAAAGCCGCCATTTT  58 351
APT61_RS01255  276633 ..  276648 -  -4.6  -4.65895   TCCGCCAGCGAAAAA              CGGCCA CTGC TGGCGG               CATGTTGCTGTTATT  71 118
        treF  274846 ..  274865 -   -15  -3.48593   GATCCGCTGACAGAA            CGGGGAGC TACG GCTCCCCG             TACAGGCCGATCAGG  93 13
APT61_RS01240  272531 ..  272559 -  -8.8  -4.07885   CATGTTCCTGTAAAA       CGTCGCCGGGGAG GGAT CCCCGCGGC-ACG        CTTAGCGGTACTCGT  76 27
APT61_RS01230  270743 ..  270765 -  -5.5  -3.09823   GTCCTTAAAATTATA           GCCTGCGCT CAGTC AACGTAGGC           TTTCATGATGTCCGT  52 11
APT61_RS01225  269517 ..  269536 -  -5.8  -3.12923   ACCAGGAAAATCACA            TCTATGAA ATGC TTCACAGA             AATTAATACTTAGAG  55 145
APT61_RS01220  267676 ..  267698 -  -6.2   -4.2349   CTTTGATACTGAAAA           TGCCGTTATC AAC GTTACCGGCA           CGGCCAGCATGGCTT  69 388
APT61_RS01205  263818 ..  263833 -    -9  -5.17786   CAATAAAAGCAAAAA              GGCAAC GTAA GTTGCC               TTTTTTATGCTCCCT 100 71
APT61_RS01150  250799 ..  250813 -  -9.2  -3.35088   AAATTGCGCAATTAA               CCCGCA ATT CGCGGG               TTTAATAAACGTAAA  69 104
        fadB NONE
        fadA  243101 ..  243117 -  -7.9  -5.46706   ATCTGAAAAGAAAAA              GCCCGCC CCT GACAGGC              GGGAAAACGGCAACT  95 184
        rfaH  239844 ..  239856 -  -9.1  -3.85698   CCCTGGCTGGATAAA                CTGCC TGG GGCAG                TGCTGCACTGTTTTA  72 357
APT61_RS01055  231060 ..  231092 -  -6.8  -4.07687   ATTGCGGCCTGAAAA     CCCGCGGCTGGCCGG AAAC CCGGGCCGC-GCTGG      CAAATATGGTGAAAG  68 193
APT61_RS01045  227566 ..  227588 - -11.3  -2.72344   CTTTATGTGGAACTA          CGGCG-CCAC GCAG GTGGACGCCG           GGACGCTGGGGATCA  72 119
        rhtB  224223 ..  224264 -  -9.7  -3.08283   ATAAGGACGGTAACA TTAATCACA-GGCCGGAT CAGCGCC ATCCGGCAATGTGATTAA GCATGCCTCGCTGAC  69 22
APT61_RS01005  220079 ..  220100 -    -3   -4.3129   CATCCATCAGGAAAA           TCCGTTAC AAAAAA GTAACGCA            ATTTTACCCGATTTT  62 47
APT61_RS01000  218848 ..  218862 -  -2.8  -3.44146   CTGCCGCACAACGAA               TCCCTG TTC CAGAAA               GTTAACTTCCTGATG  47 340
        cyaY  211661 ..  211679 -   -11  -5.22039   GGTAAATCCAAAAAA             GCGTCTCC TGA AGAGACGC             TTTTTGTTATTAGCC 100 35
        hemC NONE
        hemD NONE
APT61_RS00940 NONE
APT61_RS00935  204551 ..  204568 - -12.7  -5.68438   GTAGCAAATAAAAAA             GGAGGCC GTCA GGCCTCC              TGTAAAATTATTGCT 100 33
APT61_RS00930  202802 ..  202814 -  -4.9  -3.54459   CCAACCTGTCGCAAA                TAAGT GAC ACTTA                ACCGACTGAAAAATA  55 422
APT61_RS00835 NONE
APT61_RS00830  184348 ..  184379 - -10.8  -3.07575   AAAATCGTTAGTTAA      CAGGCCCGGTAAGCG TAG CGCTG-CCGGGCATG      TCATCAGGGTTATTG  74 35
APT61_RS00820 NONE
APT61_RS00815  181569 ..  181590 - -15.9  -5.44119   GCCACCCGAAAAAAA           GCCCGGAGT TCAA ACTCCGGGC            TTTTTATTAGTTACG 100 32
APT61_RS00805  178940 ..  178952 -  -9.1  -3.59979   TCCTGGCAGGGTAAA                CGGCT CGT AGCCG                GATAAGGCTCCGGCT  71 39
APT61_RS00775  170503 ..  170516 -  -9.5  -5.15167   GACGATTAAGAAAAA               GGGGC TACG GCCCC                TTTTTTCATCTCAGC 100 31
APT61_RS00765  168999 ..  169025 - -15.3   -3.6682   CGCCACCTATTTAAA         CTAAGCCTGCT TTATT AGCAGGCTTAG         TGGTAAGAAATTTAG 100 218
APT61_RS00725  163343 ..  163359 -  -3.6  -3.53811   GTTACGGCTTCGAAA              CGCTCG AAAAA CTAGCG              CTGTAGCACGTTTTT  50 104
APT61_RS00710  159030 ..  159062 - -12.9  -2.64416   CAGCGTTATCAGAAT     CGCACAATGCCGGT GGGGTT ACCGGCATTGT-CG      GCGGCGTTCTTTGTG  71 232
APT61_RS00695  156136 ..  156165 -  -5.7  -3.60234   TTAGATAGTGGCAAA       CTCGA-CTGCGCGA TCC TCGCGCTGGTCAAA       GAGAGTGAATCCTTT  55 476
APT61_RS00670  150797 ..  150810 -  -2.4  -2.52795   AATGCGGGCAATTTA               CGAA ATTTAA TTCG                CTTTGCGTCAGATAA  39 109
APT61_RS00665  147945 ..  147965 - -12.6  -4.78149   TTGATAATTGAAAAA            GGCCATCC TAATT GGATGGCC            TTTGCCGTGATGATG 100 55
APT61_RS00660  146852 ..  146868 -  -4.4  -4.66537   GCTGGGAATAGAAAA              CCCCTT AGCGG AAGAGG              ATATCCGCCGGGCGG  72 211
APT61_RS00630 NONE
APT61_RS00625 NONE
        gldA  137397 ..  137414 - -12.7  -5.19879   CTGTAAACAGAAAAA             TCCCCGC TCCG GCGGGGA              TTTTTTTATCGGTTA 100 103
APT61_RS00595  129356 ..  129379 - -16.8  -3.01125   ACTTCTGAGAAACCA          TCCCGCTGAG CACC CTCAGCGGGA           TCACACCGCAGCGTT 100 39
APT61_RS00580  125682 ..  125692 -  -2.6    -3.494   GAAGCGGTTACAGAA                 TTTT CAT AAAA                 AGTGTGAGGCGAGTT  49 70
APT61_RS00575  124536 ..  124550 -  -3.4  -2.55015   ATGTTACTTAAGCGA               CGGGCC TTT GACCAG               ATGAGGAAGTCTGAA  42 52
APT61_RS00570  123442 ..  123463 -  -9.4    -3.679   AAATTCGGAATAGAA           GCCCCGAG GCAGTG CTCAGGGC            TGAATAGGAGTATAG  74 62
APT61_RS00565 NONE
        hslU  121488 ..  121505 - -11.3  -5.10461   TTTAGCCAATAAAAA             TGGGGCT TTTC AGCCCCA              TCATCAGTGATGAAA 100 56
APT61_RS00555  120550 ..  120566 -  -6.6  -3.05935   ATATTTGTCAGCTAA              CTTAGC GTCTG GCTAAG              GACAATCCCGACTAC  55 5
APT61_RS00550  119935 ..  119963 - -18.3  -4.84602   ATAGAAATAAATAAA        GAAGGCCATCTAG ATA CCAGATGGCCTTC        ATTCACTACTCAATA 100 31
APT61_RS00530 NONE
        glpK  115653 ..  115697 -  -6.4  -2.82856   CACAGAGTGAAGAAG GGGGAGGGTGGTGCGGTCTGAA CCC CTCACCCCG-ACC-CTCTCCCC AAAGGGGAGAGGGTA  54 90
APT61_RS00520  114595 ..  114608 -  -2.4  -3.48772   AACGGTTTTACAGAA               TGTG GGTCTG CACA                TCGGGATCCTTGCGG  47 4
APT61_RS00515  113719 ..  113731 -  -3.4  -3.42373   TAAATACGGCAAAGA                TACG ATCGA CGTA                AAGTACCGTTAATTA  48 38
APT61_RS00505  112580 ..  112590 -  -3.2  -2.86164   CTGTGAATCAGTATA                 GAGA TTT TCCC                 TCGAAAGGCTTTGCT  43 49
APT61_RS00500  111702 ..  111729 - -14.2  -3.60151   CTGGGGAAATTATAA        TTTCCCTCTCCC CGGG GGGAGAGGGAGA         AGGGTTTTACGCCTG  93 32
APT61_RS00465 NONE
        cpxA  103262 ..  103289 -  -9.2  -3.33696   TTGTGGGGGAAGTAA        GCCGGGT-AAAAC GGA GTCTCCACCCGGC        TTTTTGCCTCTGCGC  69 99
APT61_RS00435 NONE
APT61_RS00430   96821 ..   96847 -  -8.7  -3.53444   TCATTTCCTGTTAAA        TCGGGGTG-GGG TTTC CCCTCACCCTGA         CCCTCTCCCCAAAGG  69 98
APT61_RS00425 NONE
APT61_RS00420 NONE
APT61_RS00415 NONE
APT61_RS00410 NONE
APT61_RS00405   90915 ..   90925 -  -2.4  -4.07568   TCTCTCTGCCCAAAA                 GGGC GGG GCAC                 TGCACCGTGCGGCCT  55 441
APT61_RS00400 NONE
APT61_RS00395   89219 ..   89256 - -11.9  -2.83073   ACGTTGAGCAATAAG   CGGGATATCGCTGCCGC GAGC GCGGCAGCGTTAACACA    TCAGGCCAGGTAAAA  76 26
APT61_RS00370 NONE
APT61_RS00365   83054 ..   83068 - -12.8  -3.34398   GTTTTTGTCGAAAGA               GCGCCC CCG GGGCGC               TTTTTTAGTTTATAC  87 30
APT61_RS00350 NONE
APT61_RS00345 NONE
APT61_RS00340 NONE
APT61_RS00335 NONE
APT61_RS00330   75872 ..   75896 - -11.4  -3.35679   GTTTGGGATTGACAA         GCCGGGCAAGC TCAC GCC-GCCCGGC          ATTATCACAGGGAAT  82 40
APT61_RS00325 NONE
APT61_RS00320 NONE
APT61_RS00315 NONE
APT61_RS00310   64087 ..   64112 -  -5.3  -2.87463   AATCCTTGTCATACA         GCTGCAGAGCA ATAC TGCCCGCCAGC          TCCCCGGCCAGCGCA  49 296
APT61_RS00305 NONE
APT61_RS00300 NONE
APT61_RS00295   61446 ..   61459 -  -2.4  -5.24003   AATAAAAAGCAAAAA               TTCC CGCTTT GGAA                GGCGGGGGTTTTAGT  76 49
APT61_RS00290 NONE
APT61_RS00285 NONE
APT61_RS00280   59181 ..   59199 -  -3.8  -2.62184   CGCTGTTTCACACGA             TATCGGTG TTT CACCACTA             CAGGCCTCCTTAATC  44 192
APT61_RS00275 NONE
APT61_RS00270   58385 ..   58398 -  -6.7  -3.51934   CCGCCTCGACAAATA               GGTGA TTCT TCACC                ATAACTCATTCTGAT  61 53
APT61_RS00265 NONE
APT61_RS00260   57650 ..   57668 -  -3.8  -2.71263   AATGTGCCGGAAGTA             GTGATTCA AGG CGAATCCC             GGCGAGGCGGCCAGA  44 47
APT61_RS00255   56757 ..   56785 - -10.5  -3.71873   GTAGTGATATTCAAA        GAGAGTTATCT TTTCAGG AGATAACTCTC        ACGTTATATCAGAAG  79 34
APT61_RS00220 NONE
APT61_RS00215 NONE
APT61_RS00210 NONE
APT61_RS00205 NONE
APT61_RS00200 NONE
APT61_RS00195   43813 ..   43841 -  -9.6  -3.03792   ATCAGGTACAGAAAG        GCCTCCCTCCTG ATTAA CAGGAAGGAAAC        AATGGCCGGATTTAT  69 43
        ompL   43071 ..   43090 - -13.6   -4.8622   CCCGGTAACTAAAAA            GCCGCTGA TCCC TCAGCGGC             TTTTTTATTAGAACG 100 33
        glnA   39349 ..   39394 -  -4.5  -6.09888   CGGCAACAAAAAAAA CGACTATCAATCTCGCGCGGA AAAA TCCGCGCGACAGGGATTGAAG ATTAAACGCTGTAGT 100 27
        glnL NONE
        glnG   36678 ..   36701 -    -6  -3.93038   CATCGGAACAGTAAA          GCGCAAAATA GCGG CAGTTTGCGC           TTAATTAATGCACTT  64 58
APT61_RS00155   33107 ..   33124 -  -9.8  -5.78622   TCAGCGCAAAAAAAA             GCGCGG ACATCG CCGCGC              TTATTATCACTCTTC 100 32
APT61_RS00145   28670 ..   28698 - -16.1   -4.4078   AGAAGAAGTAATAAA        GAAAACGCCGGTC AAT GACCGGCGTTTTT        GTATTCCGCTTTAAT 100 8
        mobA NONE
APT61_RS00120   25415 ..   25434 - -13.6  -4.72386   CAAATCAGGTAAAAA            GCCCATCC TCAC GGATGGGC             TTTTTGCGTTGTGGC 100 121
APT61_RS00095 NONE
APT61_RS00090 NONE
APT61_RS00085   17312 ..   17329 -  -4.1  -3.92373   CATCTGATTGATAAA             GGCCATA CCCG TATCGCC              TGCATTACCGGCCCG  57 441
APT61_RS00045 NONE
APT61_RS00040    6250 ..    6287 -  -6.2  -3.36515   TGCGATCGCTAAAGA   GCTGGGCGCCGTATTCC TGATT GGCAT-CGGCGGCAAGC   TGTCTCATGGTCAGC  56 406
APT61_RS00030 NONE
APT61_RS00025    4331 ..    4356 -  -3.9  -3.28712   GGTTTCTGTGGATAA         GCCGGATCTCC CGAA GAAGATCATGC          GTTTAGAAAGGATCG  50 196
        gidA    2216 ..    2242 - -14.5  -2.53831   TGTTTAAAAAGAATT        GCCCGGT-AGCG CTAC CGCTTACCGGGC         CGACGAAATGTTTGG  89 47
        gidB NONE
