APT61_RS06475 c6e226cd83164339446229abc26997d4 321 PANTHER PTHR30514:SF0 1 320 3.0E-123 T 22-04-2016 APT61_RS06475 c6e226cd83164339446229abc26997d4 321 Gene3D G3DSA:3.40.367.20 100 299 7.4E-78 T 22-04-2016 APT61_RS06475 c6e226cd83164339446229abc26997d4 321 PANTHER PTHR30514 1 320 3.0E-123 T 22-04-2016 APT61_RS06475 c6e226cd83164339446229abc26997d4 321 TIGRFAM TIGR00749 glk: glucokinase 6 310 2.6E-146 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 APT61_RS06475 c6e226cd83164339446229abc26997d4 321 Pfam PF02685 Glucokinase 6 315 2.6E-120 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 APT61_RS06475 c6e226cd83164339446229abc26997d4 321 SUPERFAMILY SSF53067 4 318 2.93E-63 T 22-04-2016 APT61_RS06475 c6e226cd83164339446229abc26997d4 321 Hamap MF_00524 Glucokinase [glk]. 2 316 39.684 T 22-04-2016 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 APT61_RS08840 5a82e543f0fe885c6aef8de0f1a1cdc1 114 Gene3D G3DSA:3.30.1330.40 11 113 1.4E-20 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APT61_RS08840 5a82e543f0fe885c6aef8de0f1a1cdc1 114 PANTHER PTHR11803 8 114 5.3E-32 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APT61_RS08840 5a82e543f0fe885c6aef8de0f1a1cdc1 114 SUPERFAMILY SSF55298 5 114 2.2E-26 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APT61_RS08840 5a82e543f0fe885c6aef8de0f1a1cdc1 114 Pfam PF01042 Endoribonuclease L-PSP 4 114 2.8E-28 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APT61_RS08690 44299a45e7dceab0e4ba2e08f42e9add 214 PANTHER PTHR24032 1 208 6.1E-51 T 22-04-2016 APT61_RS08690 44299a45e7dceab0e4ba2e08f42e9add 214 PANTHER PTHR24032:SF33 1 208 6.1E-51 T 22-04-2016 APT61_RS08690 44299a45e7dceab0e4ba2e08f42e9add 214 Gene3D G3DSA:3.60.21.10 9 213 2.9E-40 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS08690 44299a45e7dceab0e4ba2e08f42e9add 214 Pfam PF00149 Calcineurin-like phosphoesterase 12 138 3.6E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APT61_RS08690 44299a45e7dceab0e4ba2e08f42e9add 214 SUPERFAMILY SSF56300 11 213 1.08E-41 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS08690 44299a45e7dceab0e4ba2e08f42e9add 214 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 70 75 - T 22-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 APT61_RS18005 966c4ceea972bd23318f1f248098b91e 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 39.343 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 APT61_RS18005 966c4ceea972bd23318f1f248098b91e 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 1.2E-84 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 APT61_RS18005 966c4ceea972bd23318f1f248098b91e 192 SUPERFAMILY SSF53697 1 189 2.41E-53 T 22-04-2016 APT61_RS18005 966c4ceea972bd23318f1f248098b91e 192 PANTHER PTHR30390 2 192 9.4E-96 T 22-04-2016 APT61_RS18005 966c4ceea972bd23318f1f248098b91e 192 Pfam PF13580 SIS domain 12 146 1.2E-32 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APT61_RS18005 966c4ceea972bd23318f1f248098b91e 192 Gene3D G3DSA:3.40.50.10490 1 190 8.6E-65 T 22-04-2016 APT61_RS18005 966c4ceea972bd23318f1f248098b91e 192 PANTHER PTHR30390:SF6 2 192 9.4E-96 T 22-04-2016 APT61_RS06335 d55bfa547d703b58dc8cf1392431b021 167 Gene3D G3DSA:2.70.70.10 14 165 1.3E-60 T 22-04-2016 APT61_RS06335 d55bfa547d703b58dc8cf1392431b021 167 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 83 95 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS06335 d55bfa547d703b58dc8cf1392431b021 167 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 20 144 1.3E-49 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS06335 d55bfa547d703b58dc8cf1392431b021 167 SUPERFAMILY SSF51261 16 165 7.15E-56 T 22-04-2016 IPR011055 Duplicated hybrid motif APT61_RS06335 d55bfa547d703b58dc8cf1392431b021 167 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 21 141 4.3E-51 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS06335 d55bfa547d703b58dc8cf1392431b021 167 PANTHER PTHR30175 8 116 3.5E-53 T 22-04-2016 APT61_RS12600 f6d1ffc124418965a48bada48bc6ccc7 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 1.2E-18 T 22-04-2016 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APT61_RS12600 f6d1ffc124418965a48bada48bc6ccc7 218 PANTHER PTHR10851:SF0 1 218 9.3E-114 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APT61_RS12600 f6d1ffc124418965a48bada48bc6ccc7 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 218 2.3E-100 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APT61_RS12600 f6d1ffc124418965a48bada48bc6ccc7 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 16 218 38.729 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APT61_RS12600 f6d1ffc124418965a48bada48bc6ccc7 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 39 122 1.2E-25 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APT61_RS12600 f6d1ffc124418965a48bada48bc6ccc7 218 Gene3D G3DSA:2.30.110.10 22 218 2.0E-83 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS12600 f6d1ffc124418965a48bada48bc6ccc7 218 PANTHER PTHR10851 1 218 9.3E-114 T 22-04-2016 APT61_RS12600 f6d1ffc124418965a48bada48bc6ccc7 218 PIRSF PIRSF000190 1 218 4.2E-86 T 22-04-2016 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APT61_RS12600 f6d1ffc124418965a48bada48bc6ccc7 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 22-04-2016 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APT61_RS12600 f6d1ffc124418965a48bada48bc6ccc7 218 SUPERFAMILY SSF50475 21 218 5.99E-68 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS10445 d0bd2df1209278695f10982f72d90c2b 391 PANTHER PTHR23501 1 382 1.9E-128 T 22-04-2016 APT61_RS10445 d0bd2df1209278695f10982f72d90c2b 391 Gene3D G3DSA:1.20.1250.20 5 181 4.4E-23 T 22-04-2016 APT61_RS10445 d0bd2df1209278695f10982f72d90c2b 391 Gene3D G3DSA:1.20.1250.20 198 376 5.4E-10 T 22-04-2016 APT61_RS10445 d0bd2df1209278695f10982f72d90c2b 391 PANTHER PTHR23501:SF4 1 382 1.9E-128 T 22-04-2016 APT61_RS10445 d0bd2df1209278695f10982f72d90c2b 391 SUPERFAMILY SSF103473 3 377 1.44E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS10445 d0bd2df1209278695f10982f72d90c2b 391 Pfam PF07690 Major Facilitator Superfamily 8 327 1.5E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS11545 34ef38059600cecfa509178a71aeaaa7 178 PANTHER PTHR23004:SF7 7 178 1.2E-48 T 22-04-2016 APT61_RS11545 34ef38059600cecfa509178a71aeaaa7 178 PANTHER PTHR23004 7 178 1.2E-48 T 22-04-2016 APT61_RS11545 34ef38059600cecfa509178a71aeaaa7 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 7 174 5.4E-53 T 22-04-2016 IPR010323 Protein of unknown function DUF924 APT61_RS11545 34ef38059600cecfa509178a71aeaaa7 178 Gene3D G3DSA:1.20.58.320 6 78 1.2E-24 T 22-04-2016 APT61_RS11545 34ef38059600cecfa509178a71aeaaa7 178 Gene3D G3DSA:1.25.40.10 80 176 1.7E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS11545 34ef38059600cecfa509178a71aeaaa7 178 SUPERFAMILY SSF48452 5 174 2.5E-56 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS16135 98707b2254a57f4f6f5d314f6f1a16a6 263 Gene3D G3DSA:3.20.190.10 2 104 1.0E-17 T 22-04-2016 APT61_RS16135 98707b2254a57f4f6f5d314f6f1a16a6 263 ProSitePatterns PS01242 Zinc finger FPG-type signature. 238 262 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 APT61_RS16135 98707b2254a57f4f6f5d314f6f1a16a6 263 SMART SM00898 2 110 2.1E-14 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APT61_RS16135 98707b2254a57f4f6f5d314f6f1a16a6 263 PANTHER PTHR22993:SF14 1 262 4.1E-175 T 22-04-2016 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 APT61_RS16135 98707b2254a57f4f6f5d314f6f1a16a6 263 PANTHER PTHR22993 1 262 4.1E-175 T 22-04-2016 APT61_RS16135 98707b2254a57f4f6f5d314f6f1a16a6 263 SUPERFAMILY SSF57716 226 262 1.14E-10 T 22-04-2016 APT61_RS16135 98707b2254a57f4f6f5d314f6f1a16a6 263 Gene3D G3DSA:1.10.8.50 127 262 4.7E-33 T 22-04-2016 APT61_RS16135 98707b2254a57f4f6f5d314f6f1a16a6 263 Pfam PF06827 Zinc finger found in FPG and IleRS 235 262 8.2E-8 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type APT61_RS16135 98707b2254a57f4f6f5d314f6f1a16a6 263 SMART SM01232 126 221 1.8E-14 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APT61_RS16135 98707b2254a57f4f6f5d314f6f1a16a6 263 Hamap MF_01253 Endonuclease 8 [nei]. 1 263 63.426 T 22-04-2016 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 APT61_RS16135 98707b2254a57f4f6f5d314f6f1a16a6 263 SUPERFAMILY SSF46946 126 214 3.4E-18 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APT61_RS16135 98707b2254a57f4f6f5d314f6f1a16a6 263 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 205 4.5E-11 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APT61_RS16135 98707b2254a57f4f6f5d314f6f1a16a6 263 SUPERFAMILY SSF81624 2 125 1.7E-25 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APT61_RS16135 98707b2254a57f4f6f5d314f6f1a16a6 263 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 104 4.0E-12 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APT61_RS18410 07c8fa0fd84305804e49f5553d66a4e0 143 Gene3D G3DSA:3.40.50.510 1 133 6.2E-26 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APT61_RS18410 07c8fa0fd84305804e49f5553d66a4e0 143 PANTHER PTHR33799 2 142 1.1E-49 T 22-04-2016 APT61_RS18410 07c8fa0fd84305804e49f5553d66a4e0 143 SUPERFAMILY SSF53062 1 109 4.71E-23 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APT61_RS18410 07c8fa0fd84305804e49f5553d66a4e0 143 PANTHER PTHR33799:SF1 2 142 1.1E-49 T 22-04-2016 APT61_RS18410 07c8fa0fd84305804e49f5553d66a4e0 143 Pfam PF03610 PTS system fructose IIA component 3 105 3.1E-21 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 PANTHER PTHR26402:SF567 810 897 9.6E-18 T 22-04-2016 APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 PANTHER PTHR26402:SF567 75 100 9.6E-18 T 22-04-2016 APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 PANTHER PTHR26402 810 897 9.6E-18 T 22-04-2016 APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 PANTHER PTHR26402 75 100 9.6E-18 T 22-04-2016 APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 SUPERFAMILY SSF48452 440 803 6.96E-153 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 SUPERFAMILY SSF46894 827 892 5.78E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 899 39.534 T 22-04-2016 IPR023768 Transcriptional regulator HTH-type, MalT APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 SUPERFAMILY SSF52540 6 227 1.42E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 Pfam PF00196 Bacterial regulatory proteins, luxR family 835 890 2.9E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 SMART SM00421 833 890 4.9E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 Gene3D G3DSA:1.25.40.10 440 808 1.6E-104 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 Gene3D G3DSA:3.40.50.300 31 176 2.5E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 866 878 1.2E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 836 850 1.2E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 850 866 1.2E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 ProSitePatterns PS00622 LuxR-type HTH domain signature. 850 877 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS01670 eb43e486120aa7df2c2a32d27da64514 901 Gene3D G3DSA:1.10.10.10 835 893 4.3E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00795 eedadd1e9a58853810a35aef9e47d101 616 Pfam PF00920 Dehydratase family 34 607 2.2E-217 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS00795 eedadd1e9a58853810a35aef9e47d101 616 SUPERFAMILY SSF52016 421 610 2.9E-59 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT61_RS00795 eedadd1e9a58853810a35aef9e47d101 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS00795 eedadd1e9a58853810a35aef9e47d101 616 SUPERFAMILY SSF143975 3 420 9.68E-135 T 22-04-2016 APT61_RS00795 eedadd1e9a58853810a35aef9e47d101 616 PANTHER PTHR21000 1 371 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS00795 eedadd1e9a58853810a35aef9e47d101 616 PANTHER PTHR21000 406 616 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS00795 eedadd1e9a58853810a35aef9e47d101 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.232 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS00795 eedadd1e9a58853810a35aef9e47d101 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 3.6E-271 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS00795 eedadd1e9a58853810a35aef9e47d101 616 PANTHER PTHR21000:SF11 1 371 0.0 T 22-04-2016 APT61_RS00795 eedadd1e9a58853810a35aef9e47d101 616 PANTHER PTHR21000:SF11 406 616 0.0 T 22-04-2016 APT61_RS00795 eedadd1e9a58853810a35aef9e47d101 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS18645 5dff7194f7095b61c1ee58ef7fa4406c 121 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 36 118 5.8E-29 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 APT61_RS18645 5dff7194f7095b61c1ee58ef7fa4406c 121 PANTHER PTHR37479:SF1 12 121 2.5E-44 T 22-04-2016 APT61_RS18645 5dff7194f7095b61c1ee58ef7fa4406c 121 Hamap MF_00910 Cell division protein FtsL [ftsL]. 35 118 17.039 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 APT61_RS18645 5dff7194f7095b61c1ee58ef7fa4406c 121 Pfam PF04999 Cell division protein FtsL 25 119 3.7E-36 T 22-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 APT61_RS18645 5dff7194f7095b61c1ee58ef7fa4406c 121 PANTHER PTHR37479 12 121 2.5E-44 T 22-04-2016 APT61_RS22055 f5103abddb73725d7a0eeb5b804b346a 479 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 205 447 1.8E-78 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APT61_RS22055 f5103abddb73725d7a0eeb5b804b346a 479 PANTHER PTHR30562 5 474 8.5E-202 T 22-04-2016 APT61_RS22055 f5103abddb73725d7a0eeb5b804b346a 479 PANTHER PTHR30562:SF6 5 474 8.5E-202 T 22-04-2016 APT61_RS22055 f5103abddb73725d7a0eeb5b804b346a 479 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 206 218 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS22055 f5103abddb73725d7a0eeb5b804b346a 479 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 14 176 2.1E-38 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APT61_RS22055 f5103abddb73725d7a0eeb5b804b346a 479 PRINTS PR00084 Mannitol dehydrogenase signature 15 25 6.1E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS22055 f5103abddb73725d7a0eeb5b804b346a 479 PRINTS PR00084 Mannitol dehydrogenase signature 167 180 6.1E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS22055 f5103abddb73725d7a0eeb5b804b346a 479 PRINTS PR00084 Mannitol dehydrogenase signature 236 251 6.1E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS22055 f5103abddb73725d7a0eeb5b804b346a 479 PRINTS PR00084 Mannitol dehydrogenase signature 206 219 6.1E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS22055 f5103abddb73725d7a0eeb5b804b346a 479 Gene3D G3DSA:3.40.50.720 2 269 1.8E-102 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS22055 f5103abddb73725d7a0eeb5b804b346a 479 SUPERFAMILY SSF48179 271 474 6.46E-54 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS22055 f5103abddb73725d7a0eeb5b804b346a 479 SUPERFAMILY SSF51735 3 269 6.3E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS22055 f5103abddb73725d7a0eeb5b804b346a 479 Gene3D G3DSA:1.10.1040.10 270 474 1.8E-59 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS20695 9c439d4417be6a89c3e2732a9a58d2b7 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 3 378 1.6E-162 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 APT61_RS20695 9c439d4417be6a89c3e2732a9a58d2b7 378 PANTHER PTHR11271 1 378 1.9E-196 T 22-04-2016 APT61_RS20695 9c439d4417be6a89c3e2732a9a58d2b7 378 SUPERFAMILY SSF51338 2 50 4.55E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS20695 9c439d4417be6a89c3e2732a9a58d2b7 378 SUPERFAMILY SSF51338 345 377 4.55E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS20695 9c439d4417be6a89c3e2732a9a58d2b7 378 PANTHER PTHR11271:SF43 1 378 1.9E-196 T 22-04-2016 APT61_RS20695 9c439d4417be6a89c3e2732a9a58d2b7 378 Gene3D G3DSA:3.20.20.140 293 377 3.8E-9 T 22-04-2016 APT61_RS20695 9c439d4417be6a89c3e2732a9a58d2b7 378 Gene3D G3DSA:2.30.40.10 1 91 5.1E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS20695 9c439d4417be6a89c3e2732a9a58d2b7 378 SUPERFAMILY SSF51556 50 345 4.2E-22 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS20695 9c439d4417be6a89c3e2732a9a58d2b7 378 Pfam PF07969 Amidohydrolase family 284 378 3.0E-11 T 22-04-2016 IPR013108 Amidohydrolase 3 APT61_RS20695 9c439d4417be6a89c3e2732a9a58d2b7 378 PIRSF PIRSF038971 1 378 9.2E-152 T 22-04-2016 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399 APT61_RS04060 43c321f3e11a69cc2af90b73d724fa2e 359 PIRSF PIRSF001359 13 359 1.8E-105 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APT61_RS04060 43c321f3e11a69cc2af90b73d724fa2e 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APT61_RS04060 43c321f3e11a69cc2af90b73d724fa2e 359 PANTHER PTHR30559:SF0 2 359 6.0E-248 T 22-04-2016 APT61_RS04060 43c321f3e11a69cc2af90b73d724fa2e 359 Gene3D G3DSA:3.20.20.70 11 356 5.3E-125 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS04060 43c321f3e11a69cc2af90b73d724fa2e 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 9.1E-90 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APT61_RS04060 43c321f3e11a69cc2af90b73d724fa2e 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 2.8E-192 T 22-04-2016 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS04060 43c321f3e11a69cc2af90b73d724fa2e 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APT61_RS04060 43c321f3e11a69cc2af90b73d724fa2e 359 PANTHER PTHR30559 2 359 6.0E-248 T 22-04-2016 APT61_RS04060 43c321f3e11a69cc2af90b73d724fa2e 359 SUPERFAMILY SSF51569 4 357 2.01E-132 T 22-04-2016 APT61_RS04060 43c321f3e11a69cc2af90b73d724fa2e 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 2.9E-117 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APT61_RS09045 43f0e7f487df63db165ee1576caf4d66 228 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 22-04-2016 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 APT61_RS09045 43f0e7f487df63db165ee1576caf4d66 228 SUPERFAMILY SSF100950 2 221 5.44E-75 T 22-04-2016 APT61_RS09045 43f0e7f487df63db165ee1576caf4d66 228 Gene3D G3DSA:3.40.1080.10 4 218 5.4E-84 T 22-04-2016 APT61_RS09045 43f0e7f487df63db165ee1576caf4d66 228 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 6.6E-111 T 22-04-2016 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 APT61_RS09045 43f0e7f487df63db165ee1576caf4d66 228 SMART SM00882 6 219 2.7E-80 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APT61_RS09045 43f0e7f487df63db165ee1576caf4d66 228 Pfam PF01144 Coenzyme A transferase 10 217 3.9E-66 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APT61_RS09045 43f0e7f487df63db165ee1576caf4d66 228 PANTHER PTHR13707 1 217 3.5E-89 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APT61_RS02130 2e1f0a57c3c3df525e1c1e61868dfebe 130 Gene3D G3DSA:3.30.1370.30 2 72 6.3E-27 T 22-04-2016 APT61_RS02130 2e1f0a57c3c3df525e1c1e61868dfebe 130 PANTHER PTHR11758 1 130 1.8E-62 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APT61_RS02130 2e1f0a57c3c3df525e1c1e61868dfebe 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.606 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APT61_RS02130 2e1f0a57c3c3df525e1c1e61868dfebe 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APT61_RS02130 2e1f0a57c3c3df525e1c1e61868dfebe 130 Gene3D G3DSA:3.30.1490.10 74 129 1.3E-28 T 22-04-2016 APT61_RS02130 2e1f0a57c3c3df525e1c1e61868dfebe 130 SUPERFAMILY SSF56047 5 129 1.44E-45 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APT61_RS02130 2e1f0a57c3c3df525e1c1e61868dfebe 130 Pfam PF00410 Ribosomal protein S8 5 129 4.2E-48 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 SUPERFAMILY SSF50104 6 63 2.11E-17 T 22-04-2016 IPR008991 Translation protein SH3-like domain APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.066 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 SMART SM01185 69 123 1.2E-25 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 1.3E-23 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 Gene3D G3DSA:2.40.50.140 66 129 3.4E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 Gene3D G3DSA:2.40.50.140 130 187 5.0E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 SUPERFAMILY SSF50249 130 187 1.28E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 1.1E-75 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 3.8E-26 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 PIRSF PIRSF005901 2 188 8.4E-66 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 PANTHER PTHR30053 1 188 4.1E-94 T 22-04-2016 APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 SMART SM00841 131 186 7.7E-33 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 Gene3D G3DSA:2.30.30.30 2 64 5.5E-26 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 SUPERFAMILY SSF50249 70 128 1.97E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 APT61_RS20470 aa63853931aac379a44b9c83ec0b05ad 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 5.5E-22 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APT61_RS10020 8a848bb88e93d2d6b477ca07ca24caf1 681 Gene3D G3DSA:3.40.309.10 287 441 4.4E-35 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS10020 8a848bb88e93d2d6b477ca07ca24caf1 681 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 4 674 0.0 T 22-04-2016 IPR011966 Phenylacetic acid degradation protein PaaN APT61_RS10020 8a848bb88e93d2d6b477ca07ca24caf1 681 Gene3D G3DSA:3.10.129.10 521 676 5.4E-43 T 22-04-2016 IPR029069 HotDog domain APT61_RS10020 8a848bb88e93d2d6b477ca07ca24caf1 681 PANTHER PTHR11699:SF12 5 519 5.3E-183 T 22-04-2016 IPR011966 Phenylacetic acid degradation protein PaaN APT61_RS10020 8a848bb88e93d2d6b477ca07ca24caf1 681 SUPERFAMILY SSF53720 5 500 6.02E-79 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS10020 8a848bb88e93d2d6b477ca07ca24caf1 681 SUPERFAMILY SSF54637 525 676 4.27E-36 T 22-04-2016 IPR029069 HotDog domain APT61_RS10020 8a848bb88e93d2d6b477ca07ca24caf1 681 Pfam PF00171 Aldehyde dehydrogenase family 27 496 1.0E-59 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS10020 8a848bb88e93d2d6b477ca07ca24caf1 681 PANTHER PTHR11699 5 519 5.3E-183 T 22-04-2016 APT61_RS10020 8a848bb88e93d2d6b477ca07ca24caf1 681 Gene3D G3DSA:3.40.605.10 3 286 1.3E-32 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS10020 8a848bb88e93d2d6b477ca07ca24caf1 681 Pfam PF01575 MaoC like domain 536 650 1.9E-30 T 22-04-2016 IPR002539 MaoC-like domain APT61_RS09585 484512b76b7f4d3c40aec1370807e352 389 Pfam PF14559 Tetratricopeptide repeat 191 246 6.6E-6 T 22-04-2016 APT61_RS09585 484512b76b7f4d3c40aec1370807e352 389 SUPERFAMILY SSF48452 104 280 1.93E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS09585 484512b76b7f4d3c40aec1370807e352 389 PANTHER PTHR23083 8 348 1.2E-44 T 22-04-2016 APT61_RS09585 484512b76b7f4d3c40aec1370807e352 389 Gene3D G3DSA:1.25.40.10 233 324 2.4E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS09585 484512b76b7f4d3c40aec1370807e352 389 Gene3D G3DSA:1.25.40.10 123 232 1.0E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS09585 484512b76b7f4d3c40aec1370807e352 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 36.773 T 22-04-2016 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 APT61_RS09585 484512b76b7f4d3c40aec1370807e352 389 SMART SM00028 214 247 0.015 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS09585 484512b76b7f4d3c40aec1370807e352 389 SMART SM00028 180 213 32.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS09585 484512b76b7f4d3c40aec1370807e352 389 SMART SM00028 107 140 350.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS09585 484512b76b7f4d3c40aec1370807e352 389 SMART SM00028 141 174 290.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS09585 484512b76b7f4d3c40aec1370807e352 389 SMART SM00028 69 102 59.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS09585 484512b76b7f4d3c40aec1370807e352 389 Gene3D G3DSA:1.25.40.10 45 122 4.9E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS04945 f27db7ce0ce90ab4883cf1a8c3ec7664 377 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 186 347 5.6E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS04945 f27db7ce0ce90ab4883cf1a8c3ec7664 377 Gene3D G3DSA:1.10.3720.10 163 348 1.8E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS04945 f27db7ce0ce90ab4883cf1a8c3ec7664 377 SUPERFAMILY SSF161098 165 347 1.3E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS04945 f27db7ce0ce90ab4883cf1a8c3ec7664 377 PANTHER PTHR30177 83 367 1.3E-138 T 22-04-2016 APT61_RS04945 f27db7ce0ce90ab4883cf1a8c3ec7664 377 PANTHER PTHR30177:SF2 83 367 1.3E-138 T 22-04-2016 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 PANTHER PTHR10515:SF0 2 440 1.7E-225 T 22-04-2016 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 PANTHER PTHR10515 2 440 1.7E-225 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 6.3E-25 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 SUPERFAMILY SSF47648 3 70 8.9E-21 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 22-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 Gene3D G3DSA:3.40.1030.10 75 337 1.2E-109 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 7.9E-53 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 1 439 54.363 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 1.4E-235 T 22-04-2016 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 1.2E-17 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 PIRSF PIRSF000478 1 439 4.9E-152 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 SMART SM00941 350 424 1.5E-29 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 SUPERFAMILY SSF54680 337 439 2.49E-32 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 SUPERFAMILY SSF52418 74 334 7.59E-88 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 Gene3D G3DSA:1.20.970.10 2 68 3.4E-29 T 22-04-2016 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 1.9E-167 T 22-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 APT61_RS19150 4be701be1102a6a5ac267f8d3df03561 440 Gene3D G3DSA:3.90.1170.30 338 432 1.3E-36 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 APT61_RS10755 f3be62e37f7dc37d1229358e194631db 346 PANTHER PTHR11695 26 345 1.4E-199 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS10755 f3be62e37f7dc37d1229358e194631db 346 Gene3D G3DSA:3.90.180.10 5 142 3.3E-58 T 22-04-2016 IPR011032 GroES-like APT61_RS10755 f3be62e37f7dc37d1229358e194631db 346 Pfam PF16884 N-terminal domain of oxidoreductase 9 115 8.3E-44 T 22-04-2016 APT61_RS10755 f3be62e37f7dc37d1229358e194631db 346 SMART SM00829 21 339 0.0012 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APT61_RS10755 f3be62e37f7dc37d1229358e194631db 346 PANTHER PTHR11695:SF557 26 345 1.4E-199 T 22-04-2016 APT61_RS10755 f3be62e37f7dc37d1229358e194631db 346 Gene3D G3DSA:3.40.50.720 143 309 2.1E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10755 f3be62e37f7dc37d1229358e194631db 346 SUPERFAMILY SSF50129 299 340 8.95E-5 T 22-04-2016 IPR011032 GroES-like APT61_RS10755 f3be62e37f7dc37d1229358e194631db 346 SUPERFAMILY SSF50129 6 146 1.62E-45 T 22-04-2016 IPR011032 GroES-like APT61_RS10755 f3be62e37f7dc37d1229358e194631db 346 Pfam PF00107 Zinc-binding dehydrogenase 161 298 1.1E-20 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APT61_RS10755 f3be62e37f7dc37d1229358e194631db 346 SUPERFAMILY SSF51735 127 306 7.68E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11130 23093bfe37a092c9df3aef4152c8fb8c 363 Pfam PF02627 Carboxymuconolactone decarboxylase family 225 289 1.5E-12 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS11130 23093bfe37a092c9df3aef4152c8fb8c 363 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 187 361 6.3E-42 T 22-04-2016 IPR010195 Uncharacterised peroxidase-related APT61_RS11130 23093bfe37a092c9df3aef4152c8fb8c 363 PANTHER PTHR35446:SF2 136 360 4.2E-34 T 22-04-2016 APT61_RS11130 23093bfe37a092c9df3aef4152c8fb8c 363 PANTHER PTHR35446 136 360 4.2E-34 T 22-04-2016 APT61_RS11130 23093bfe37a092c9df3aef4152c8fb8c 363 Gene3D G3DSA:1.20.1290.10 242 360 3.2E-32 T 22-04-2016 IPR029032 AhpD-like APT61_RS11130 23093bfe37a092c9df3aef4152c8fb8c 363 Gene3D G3DSA:1.20.1290.10 61 147 9.2E-11 T 22-04-2016 IPR029032 AhpD-like APT61_RS11130 23093bfe37a092c9df3aef4152c8fb8c 363 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 241 289 1.0E-11 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS11130 23093bfe37a092c9df3aef4152c8fb8c 363 TIGRFAM TIGR04030 perox_Avi_7169: alkylhydroperoxidase domain protein, Avi_7169 family 174 360 8.1E-89 T 22-04-2016 IPR023923 Alkylhydroperoxidase domain-containing protein, Avi7169 APT61_RS11130 23093bfe37a092c9df3aef4152c8fb8c 363 SUPERFAMILY SSF69118 19 148 1.12E-15 T 22-04-2016 IPR029032 AhpD-like APT61_RS11130 23093bfe37a092c9df3aef4152c8fb8c 363 SUPERFAMILY SSF69118 183 360 1.33E-34 T 22-04-2016 IPR029032 AhpD-like APT61_RS05305 1c9c73212362a213f43e485bb9641463 182 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 25 41 4.1E-12 T 22-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APT61_RS05305 1c9c73212362a213f43e485bb9641463 182 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 145 166 4.1E-12 T 22-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APT61_RS05305 1c9c73212362a213f43e485bb9641463 182 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 90 112 4.1E-12 T 22-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APT61_RS05305 1c9c73212362a213f43e485bb9641463 182 Pfam PF02794 RTX toxin acyltransferase family 23 149 1.1E-44 T 22-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APT61_RS00530 b2edc599212463631953bfe26c8285bb 281 Pfam PF00230 Major intrinsic protein 3 251 5.8E-72 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS00530 b2edc599212463631953bfe26c8285bb 281 PRINTS PR00783 Major intrinsic protein family signature 151 169 5.1E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS00530 b2edc599212463631953bfe26c8285bb 281 PRINTS PR00783 Major intrinsic protein family signature 85 104 5.1E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS00530 b2edc599212463631953bfe26c8285bb 281 PRINTS PR00783 Major intrinsic protein family signature 234 254 5.1E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS00530 b2edc599212463631953bfe26c8285bb 281 PRINTS PR00783 Major intrinsic protein family signature 9 28 5.1E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS00530 b2edc599212463631953bfe26c8285bb 281 PRINTS PR00783 Major intrinsic protein family signature 184 206 5.1E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS00530 b2edc599212463631953bfe26c8285bb 281 PRINTS PR00783 Major intrinsic protein family signature 48 72 5.1E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS00530 b2edc599212463631953bfe26c8285bb 281 PANTHER PTHR19139 10 272 6.5E-95 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS00530 b2edc599212463631953bfe26c8285bb 281 PANTHER PTHR19139:SF100 10 272 6.5E-95 T 22-04-2016 APT61_RS00530 b2edc599212463631953bfe26c8285bb 281 SUPERFAMILY SSF81338 9 257 1.44E-78 T 22-04-2016 IPR023271 Aquaporin-like APT61_RS00530 b2edc599212463631953bfe26c8285bb 281 TIGRFAM TIGR00861 MIP: MIP family channel proteins 13 251 2.5E-73 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS00530 b2edc599212463631953bfe26c8285bb 281 ProSitePatterns PS00221 MIP family signature. 66 74 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 APT61_RS00530 b2edc599212463631953bfe26c8285bb 281 Gene3D G3DSA:1.20.1080.10 4 258 7.8E-85 T 22-04-2016 IPR023271 Aquaporin-like APT61_RS04090 9997cf25fb33b47a86e2f6183c393740 410 SUPERFAMILY SSF55021 328 409 2.14E-21 T 22-04-2016 APT61_RS04090 9997cf25fb33b47a86e2f6183c393740 410 Gene3D G3DSA:3.30.70.260 324 409 1.3E-29 T 22-04-2016 APT61_RS04090 9997cf25fb33b47a86e2f6183c393740 410 Gene3D G3DSA:3.40.50.720 121 297 8.8E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS04090 9997cf25fb33b47a86e2f6183c393740 410 PANTHER PTHR10996:SF18 1 368 9.4E-248 T 22-04-2016 IPR029015 D-3-phosphoglycerate dehydrogenase, type2 GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 APT61_RS04090 9997cf25fb33b47a86e2f6183c393740 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT61_RS04090 9997cf25fb33b47a86e2f6183c393740 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 3.8E-38 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APT61_RS04090 9997cf25fb33b47a86e2f6183c393740 410 SUPERFAMILY SSF51735 108 295 5.32E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS04090 9997cf25fb33b47a86e2f6183c393740 410 SUPERFAMILY SSF52283 7 137 3.4E-50 T 22-04-2016 APT61_RS04090 9997cf25fb33b47a86e2f6183c393740 410 Gene3D G3DSA:3.40.50.720 8 120 2.1E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS04090 9997cf25fb33b47a86e2f6183c393740 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 9.1E-52 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APT61_RS04090 9997cf25fb33b47a86e2f6183c393740 410 PANTHER PTHR10996 1 368 9.4E-248 T 22-04-2016 APT61_RS04090 9997cf25fb33b47a86e2f6183c393740 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APT61_RS04090 9997cf25fb33b47a86e2f6183c393740 410 Pfam PF01842 ACT domain 345 401 1.1E-6 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APT61_RS04090 9997cf25fb33b47a86e2f6183c393740 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT61_RS20490 d110ef6b795f090060e8500e555c6300 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 22-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 APT61_RS20490 d110ef6b795f090060e8500e555c6300 97 PANTHER PTHR10772 1 96 2.0E-39 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APT61_RS20490 d110ef6b795f090060e8500e555c6300 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.923 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APT61_RS20490 d110ef6b795f090060e8500e555c6300 97 Gene3D G3DSA:2.30.33.40 2 96 3.0E-32 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APT61_RS20490 d110ef6b795f090060e8500e555c6300 97 SUPERFAMILY SSF50129 1 96 4.24E-31 T 22-04-2016 IPR011032 GroES-like APT61_RS20490 d110ef6b795f090060e8500e555c6300 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.4E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APT61_RS20490 d110ef6b795f090060e8500e555c6300 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.4E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APT61_RS20490 d110ef6b795f090060e8500e555c6300 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.4E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APT61_RS20490 d110ef6b795f090060e8500e555c6300 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.4E-27 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APT61_RS20490 d110ef6b795f090060e8500e555c6300 97 SMART SM00883 2 95 7.4E-49 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APT61_RS20490 d110ef6b795f090060e8500e555c6300 97 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 5.7E-30 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 APT61_RS18770 7a9b9522ae1d81d7878daf28790ff045 485 Gene3D G3DSA:3.40.309.10 263 440 1.3E-50 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS18770 7a9b9522ae1d81d7878daf28790ff045 485 Pfam PF00171 Aldehyde dehydrogenase family 20 474 4.2E-123 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS18770 7a9b9522ae1d81d7878daf28790ff045 485 Gene3D G3DSA:3.40.605.10 5 262 4.4E-71 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS18770 7a9b9522ae1d81d7878daf28790ff045 485 SUPERFAMILY SSF53720 4 475 7.2E-126 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS18770 7a9b9522ae1d81d7878daf28790ff045 485 PANTHER PTHR11699 6 473 3.4E-141 T 22-04-2016 APT61_RS18770 7a9b9522ae1d81d7878daf28790ff045 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APT61_RS01605 dff0f5e8e1aa37f10ddfd118ec9d03b8 175 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 172 2.7E-70 T 22-04-2016 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530|UniPathway: UPA00792 APT61_RS01605 dff0f5e8e1aa37f10ddfd118ec9d03b8 175 PANTHER PTHR11603 1 174 1.5E-139 T 22-04-2016 APT61_RS01605 dff0f5e8e1aa37f10ddfd118ec9d03b8 175 Pfam PF01202 Shikimate kinase 17 169 9.3E-11 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS01605 dff0f5e8e1aa37f10ddfd118ec9d03b8 175 Gene3D G3DSA:3.40.50.300 4 173 1.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01605 dff0f5e8e1aa37f10ddfd118ec9d03b8 175 SUPERFAMILY SSF52540 4 172 1.78E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01605 dff0f5e8e1aa37f10ddfd118ec9d03b8 175 PANTHER PTHR11603:SF154 1 174 1.5E-139 T 22-04-2016 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 SMART SM01086 653 744 1.8E-35 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 Gene3D G3DSA:1.10.8.60 351 435 2.9E-30 T 22-04-2016 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 595 609 2.5E-35 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 491 509 2.5E-35 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 562 580 2.5E-35 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 533 551 2.5E-35 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 SUPERFAMILY SSF52540 437 748 8.58E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 486 647 2.9E-47 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 Gene3D G3DSA:3.40.50.300 167 350 7.2E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 734 0.0 T 22-04-2016 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 7.7E-15 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 Gene3D G3DSA:1.10.8.60 664 753 3.4E-32 T 22-04-2016 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 SUPERFAMILY SSF52540 169 426 3.17E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 Gene3D G3DSA:1.10.1780.10 1 141 4.1E-45 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 SUPERFAMILY SSF81923 1 141 2.62E-58 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 653 733 2.4E-25 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 SMART SM00382 206 351 1.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 SMART SM00382 487 654 1.4E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 518 536 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 342 5.1E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS15085 955ca23ef703ac966787389e7bc11ed7 758 Gene3D G3DSA:3.40.50.300 442 663 3.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16860 9924474b16d8ab83aa4aab3c4af28d2e 217 Pfam PF00881 Nitroreductase family 8 193 2.6E-34 T 22-04-2016 IPR029479 Nitroreductase APT61_RS16860 9924474b16d8ab83aa4aab3c4af28d2e 217 SUPERFAMILY SSF55469 1 216 1.96E-66 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APT61_RS16860 9924474b16d8ab83aa4aab3c4af28d2e 217 Gene3D G3DSA:3.40.109.10 1 215 2.2E-62 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APT61_RS16860 9924474b16d8ab83aa4aab3c4af28d2e 217 PANTHER PTHR23026 1 216 3.2E-111 T 22-04-2016 APT61_RS16860 9924474b16d8ab83aa4aab3c4af28d2e 217 PANTHER PTHR23026:SF101 1 216 3.2E-111 T 22-04-2016 APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 321 503 2.7E-52 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 114 6.1E-12 T 22-04-2016 IPR000014 PAS domain APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 SUPERFAMILY SSF55785 21 114 6.81E-25 T 22-04-2016 IPR000014 PAS domain APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 SMART SM00283 259 506 1.8E-88 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 SUPERFAMILY SSF58104 233 505 3.14E-61 T 22-04-2016 APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 PANTHER PTHR32089:SF64 51 503 2.2E-133 T 22-04-2016 APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 PANTHER PTHR32089 51 503 2.2E-133 T 22-04-2016 APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 Pfam PF08447 PAS fold 32 113 7.2E-14 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 Pfam PF00672 HAMP domain 187 246 5.9E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 Gene3D G3DSA:1.10.287.950 274 478 2.2E-54 T 22-04-2016 APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 434 463 1.4E-41 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 280 309 1.4E-41 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 357 384 1.4E-41 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 386 415 1.4E-41 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 Gene3D G3DSA:3.30.450.20 20 114 2.7E-21 T 22-04-2016 APT61_RS03150 fb154961eb0c6f30abb309e57e0fc98b 506 SMART SM00086 80 121 0.006 T 22-04-2016 IPR001610 PAC motif APT61_RS07750 2350918df4c2282562efacea552862ae 461 Gene3D G3DSA:2.160.20.10 46 374 3.2E-7 T 22-04-2016 IPR012334 Pectin lyase fold APT61_RS07750 2350918df4c2282562efacea552862ae 461 TIGRFAM TIGR04004 WcaM: colanic acid biosynthesis protein WcaM 3 461 1.3E-277 T 22-04-2016 IPR023882 Colanic acid biosynthesis WcaM UniPathway: UPA00936 APT61_RS07750 2350918df4c2282562efacea552862ae 461 SUPERFAMILY SSF51126 43 345 5.28E-22 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APT61_RS01145 81984dd5adef5f682bdc61e941dff77e 180 Gene3D G3DSA:3.40.50.360 2 73 2.0E-25 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS01145 81984dd5adef5f682bdc61e941dff77e 180 Gene3D G3DSA:3.40.50.360 105 175 2.0E-25 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS01145 81984dd5adef5f682bdc61e941dff77e 180 Pfam PF12724 Flavodoxin domain 4 152 1.3E-51 T 22-04-2016 IPR026816 Flavodoxin domain APT61_RS01145 81984dd5adef5f682bdc61e941dff77e 180 PANTHER PTHR38030 1 180 9.9E-102 T 22-04-2016 APT61_RS01145 81984dd5adef5f682bdc61e941dff77e 180 PANTHER PTHR38030:SF2 1 180 9.9E-102 T 22-04-2016 APT61_RS01145 81984dd5adef5f682bdc61e941dff77e 180 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 APT61_RS01145 81984dd5adef5f682bdc61e941dff77e 180 SUPERFAMILY SSF52218 1 173 1.68E-31 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS14570 a8017574023a8f75af4682a46a58fe0f 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.3E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS14570 a8017574023a8f75af4682a46a58fe0f 306 Pfam PF03466 LysR substrate binding domain 88 297 2.2E-48 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS14570 a8017574023a8f75af4682a46a58fe0f 306 SUPERFAMILY SSF46785 5 88 2.82E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14570 a8017574023a8f75af4682a46a58fe0f 306 PANTHER PTHR30537 1 305 4.7E-113 T 22-04-2016 APT61_RS14570 a8017574023a8f75af4682a46a58fe0f 306 PANTHER PTHR30537:SF5 1 305 4.7E-113 T 22-04-2016 APT61_RS14570 a8017574023a8f75af4682a46a58fe0f 306 Gene3D G3DSA:3.40.190.10 92 176 3.0E-24 T 22-04-2016 APT61_RS14570 a8017574023a8f75af4682a46a58fe0f 306 Gene3D G3DSA:1.10.10.10 4 85 2.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14570 a8017574023a8f75af4682a46a58fe0f 306 SUPERFAMILY SSF53850 87 300 6.52E-49 T 22-04-2016 APT61_RS14570 a8017574023a8f75af4682a46a58fe0f 306 Gene3D G3DSA:3.40.190.10 177 259 7.4E-27 T 22-04-2016 APT61_RS08155 876508e6535be6af31e822992361346b 921 SUPERFAMILY SSF53448 470 539 3.81E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS08155 876508e6535be6af31e822992361346b 921 SUPERFAMILY SSF53448 300 432 3.81E-45 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS08155 876508e6535be6af31e822992361346b 921 SUPERFAMILY SSF53448 85 252 8.81E-6 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS08155 876508e6535be6af31e822992361346b 921 PANTHER PTHR22916 256 451 5.1E-37 T 22-04-2016 APT61_RS08155 876508e6535be6af31e822992361346b 921 PANTHER PTHR22916 467 528 5.1E-37 T 22-04-2016 APT61_RS08155 876508e6535be6af31e822992361346b 921 SUPERFAMILY SSF53756 646 904 8.63E-9 T 22-04-2016 APT61_RS08155 876508e6535be6af31e822992361346b 921 Pfam PF00535 Glycosyl transferase family 2 310 491 5.9E-21 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APT61_RS08155 876508e6535be6af31e822992361346b 921 Gene3D G3DSA:3.90.550.10 305 522 1.5E-42 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS15700 ac36f23b1da93905b4bc8febac869268 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site APT61_RS15700 ac36f23b1da93905b4bc8febac869268 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 9 67 9.8E-18 T 22-04-2016 IPR012783 Zinc finger, C4 DksA/TraR-type APT61_RS15700 ac36f23b1da93905b4bc8febac869268 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 36 67 8.8E-16 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APT61_RS15700 ac36f23b1da93905b4bc8febac869268 88 SUPERFAMILY SSF57716 38 71 1.71E-8 T 22-04-2016 APT61_RS15700 ac36f23b1da93905b4bc8febac869268 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 1.5E-6 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APT61_RS15700 ac36f23b1da93905b4bc8febac869268 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 1.5E-6 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APT61_RS15700 ac36f23b1da93905b4bc8febac869268 88 PANTHER PTHR38777 2 88 2.9E-33 T 22-04-2016 APT61_RS15700 ac36f23b1da93905b4bc8febac869268 88 PANTHER PTHR38777:SF1 2 88 2.9E-33 T 22-04-2016 APT61_RS16900 7db17b0e4e9f12649b1ed05dd27e4055 341 Pfam PF07582 AP endonuclease family 2 C terminus 280 334 2.2E-21 T 22-04-2016 IPR011418 AP endonuclease, family 2, C-terminal APT61_RS16900 7db17b0e4e9f12649b1ed05dd27e4055 341 PANTHER PTHR12110:SF17 31 90 9.3E-30 T 22-04-2016 APT61_RS16900 7db17b0e4e9f12649b1ed05dd27e4055 341 PANTHER PTHR12110:SF17 110 338 9.3E-30 T 22-04-2016 APT61_RS16900 7db17b0e4e9f12649b1ed05dd27e4055 341 SUPERFAMILY SSF51658 7 322 1.31E-61 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS16900 7db17b0e4e9f12649b1ed05dd27e4055 341 Gene3D G3DSA:3.20.20.150 10 324 1.3E-70 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS16900 7db17b0e4e9f12649b1ed05dd27e4055 341 Pfam PF01261 Xylose isomerase-like TIM barrel 30 279 5.0E-34 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS16900 7db17b0e4e9f12649b1ed05dd27e4055 341 PANTHER PTHR12110 31 90 9.3E-30 T 22-04-2016 APT61_RS16900 7db17b0e4e9f12649b1ed05dd27e4055 341 PANTHER PTHR12110 110 338 9.3E-30 T 22-04-2016 APT61_RS09935 32ab4f1a000dc44a162e8f81217a5165 457 PANTHER PTHR24031:SF180 1 438 5.4E-256 T 22-04-2016 APT61_RS09935 32ab4f1a000dc44a162e8f81217a5165 457 Pfam PF03880 DbpA RNA binding domain 384 454 1.0E-20 T 22-04-2016 IPR005580 DbpA, RNA-binding domain APT61_RS09935 32ab4f1a000dc44a162e8f81217a5165 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APT61_RS09935 32ab4f1a000dc44a162e8f81217a5165 457 SMART SM00490 255 336 7.6E-29 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS09935 32ab4f1a000dc44a162e8f81217a5165 457 Gene3D G3DSA:3.40.50.300 2 208 4.7E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09935 32ab4f1a000dc44a162e8f81217a5165 457 Pfam PF00271 Helicase conserved C-terminal domain 229 336 1.0E-26 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS09935 32ab4f1a000dc44a162e8f81217a5165 457 Pfam PF00270 DEAD/DEAH box helicase 27 191 1.1E-43 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APT61_RS09935 32ab4f1a000dc44a162e8f81217a5165 457 Gene3D G3DSA:3.40.50.300 214 370 9.6E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09935 32ab4f1a000dc44a162e8f81217a5165 457 PANTHER PTHR24031 1 438 5.4E-256 T 22-04-2016 APT61_RS09935 32ab4f1a000dc44a162e8f81217a5165 457 SMART SM00487 22 219 1.0E-56 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS09935 32ab4f1a000dc44a162e8f81217a5165 457 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 457 69.549 T 22-04-2016 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 APT61_RS09935 32ab4f1a000dc44a162e8f81217a5165 457 SUPERFAMILY SSF52540 72 350 3.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18620 8fef4f6a6dff1f759cd16bcc6a014ded 438 Gene3D G3DSA:3.40.1190.10 94 299 4.5E-66 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18620 8fef4f6a6dff1f759cd16bcc6a014ded 438 SUPERFAMILY SSF53244 299 437 4.07E-51 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS18620 8fef4f6a6dff1f759cd16bcc6a014ded 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 34.749 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS18620 8fef4f6a6dff1f759cd16bcc6a014ded 438 PANTHER PTHR23135 1 437 7.7E-172 T 22-04-2016 APT61_RS18620 8fef4f6a6dff1f759cd16bcc6a014ded 438 SUPERFAMILY SSF51984 3 94 5.1E-24 T 22-04-2016 APT61_RS18620 8fef4f6a6dff1f759cd16bcc6a014ded 438 SUPERFAMILY SSF53623 95 297 5.36E-56 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18620 8fef4f6a6dff1f759cd16bcc6a014ded 438 PANTHER PTHR23135:SF2 1 437 7.7E-172 T 22-04-2016 APT61_RS18620 8fef4f6a6dff1f759cd16bcc6a014ded 438 Gene3D G3DSA:3.40.50.720 3 92 1.8E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS18620 8fef4f6a6dff1f759cd16bcc6a014ded 438 Pfam PF08245 Mur ligase middle domain 110 280 7.5E-27 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18620 8fef4f6a6dff1f759cd16bcc6a014ded 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 372 8.4E-8 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS18620 8fef4f6a6dff1f759cd16bcc6a014ded 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 7.3E-127 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS18620 8fef4f6a6dff1f759cd16bcc6a014ded 438 Gene3D G3DSA:3.90.190.20 301 433 2.2E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS02110 fa1c6862141ac7f3ba44810ef067cda4 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 1.2E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APT61_RS02110 fa1c6862141ac7f3ba44810ef067cda4 123 PANTHER PTHR11761 1 123 1.3E-78 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APT61_RS02110 fa1c6862141ac7f3ba44810ef067cda4 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site APT61_RS02110 fa1c6862141ac7f3ba44810ef067cda4 123 Gene3D G3DSA:2.40.150.20 1 123 1.2E-55 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APT61_RS02110 fa1c6862141ac7f3ba44810ef067cda4 123 SUPERFAMILY SSF50193 2 122 4.06E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APT61_RS02110 fa1c6862141ac7f3ba44810ef067cda4 123 SMART SM01374 1 123 6.4E-86 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APT61_RS02110 fa1c6862141ac7f3ba44810ef067cda4 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.914 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 APT61_RS02110 fa1c6862141ac7f3ba44810ef067cda4 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.4E-59 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 APT61_RS22040 c8f4ec6613f542083817fe0c1cc20d4e 411 Gene3D G3DSA:1.20.1250.20 5 190 1.3E-44 T 22-04-2016 APT61_RS22040 c8f4ec6613f542083817fe0c1cc20d4e 411 Pfam PF07690 Major Facilitator Superfamily 13 370 8.3E-55 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS22040 c8f4ec6613f542083817fe0c1cc20d4e 411 PANTHER PTHR11662:SF257 4 402 2.4E-147 T 22-04-2016 APT61_RS22040 c8f4ec6613f542083817fe0c1cc20d4e 411 PANTHER PTHR11662 4 402 2.4E-147 T 22-04-2016 APT61_RS22040 c8f4ec6613f542083817fe0c1cc20d4e 411 SUPERFAMILY SSF103473 3 408 3.79E-78 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS22040 c8f4ec6613f542083817fe0c1cc20d4e 411 Gene3D G3DSA:1.20.1250.20 210 407 2.6E-27 T 22-04-2016 APT61_RS22040 c8f4ec6613f542083817fe0c1cc20d4e 411 PIRSF PIRSF002808 1 410 1.2E-35 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APT61_RS12380 a05a24bbec5173b72e611596321697ff 181 Pfam PF09374 Predicted Peptidoglycan domain 95 179 1.7E-22 T 22-04-2016 IPR018537 Peptidoglycan binding domain APT61_RS12380 a05a24bbec5173b72e611596321697ff 181 SUPERFAMILY SSF53955 4 176 4.22E-47 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS12380 a05a24bbec5173b72e611596321697ff 181 Pfam PF05838 Glycosyl hydrolase 108 8 90 8.4E-27 T 22-04-2016 IPR008565 Protein of unknown function DUF847 APT61_RS12380 a05a24bbec5173b72e611596321697ff 181 Gene3D G3DSA:1.20.141.10 4 179 3.0E-48 T 22-04-2016 APT61_RS07690 8a153392550116af6f71a3325b72e89b 248 PANTHER PTHR22916 1 234 4.0E-77 T 22-04-2016 APT61_RS07690 8a153392550116af6f71a3325b72e89b 248 PANTHER PTHR22916:SF4 1 234 4.0E-77 T 22-04-2016 APT61_RS07690 8a153392550116af6f71a3325b72e89b 248 TIGRFAM TIGR04009 wcaE: colanic acid biosynthesis glycosyltransferase WcaE 1 248 3.1E-154 T 22-04-2016 IPR024010 Colanic acid biosynthesis, glycosyl transferase, WcaE UniPathway: UPA00936 APT61_RS07690 8a153392550116af6f71a3325b72e89b 248 SUPERFAMILY SSF53448 1 209 1.5E-29 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS07690 8a153392550116af6f71a3325b72e89b 248 Pfam PF00535 Glycosyl transferase family 2 4 128 9.3E-17 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APT61_RS07690 8a153392550116af6f71a3325b72e89b 248 Gene3D G3DSA:3.90.550.10 1 210 1.2E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS14165 dbbca62249e9da7a05a0877784329fcc 191 Pfam PF04264 YceI-like domain 25 186 8.1E-43 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APT61_RS14165 dbbca62249e9da7a05a0877784329fcc 191 PANTHER PTHR34406:SF1 1 190 1.0E-62 T 22-04-2016 APT61_RS14165 dbbca62249e9da7a05a0877784329fcc 191 SMART SM00867 24 188 2.5E-72 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APT61_RS14165 dbbca62249e9da7a05a0877784329fcc 191 PANTHER PTHR34406 1 190 1.0E-62 T 22-04-2016 APT61_RS14165 dbbca62249e9da7a05a0877784329fcc 191 SUPERFAMILY SSF101874 22 190 1.7E-56 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APT61_RS14165 dbbca62249e9da7a05a0877784329fcc 191 Hamap MF_00780 Protein YceI [yceI]. 1 191 47.236 T 22-04-2016 IPR023480 Uncharacterised protein family UPF0312/YceI APT61_RS14165 dbbca62249e9da7a05a0877784329fcc 191 Gene3D G3DSA:2.40.128.110 22 190 2.4E-62 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APT61_RS06280 76cef02fbbec3d06ed9b4f80409cbb58 291 PANTHER PTHR30404:SF2 38 285 2.2E-202 T 22-04-2016 APT61_RS06280 76cef02fbbec3d06ed9b4f80409cbb58 291 Gene3D G3DSA:3.40.630.40 59 155 3.8E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APT61_RS06280 76cef02fbbec3d06ed9b4f80409cbb58 291 Gene3D G3DSA:3.40.630.40 203 279 3.8E-59 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APT61_RS06280 76cef02fbbec3d06ed9b4f80409cbb58 291 SUPERFAMILY SSF53187 202 279 1.13E-54 T 22-04-2016 APT61_RS06280 76cef02fbbec3d06ed9b4f80409cbb58 291 SUPERFAMILY SSF53187 59 154 1.13E-54 T 22-04-2016 APT61_RS06280 76cef02fbbec3d06ed9b4f80409cbb58 291 SMART SM00646 120 275 2.8E-68 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APT61_RS06280 76cef02fbbec3d06ed9b4f80409cbb58 291 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 61 275 1.1E-51 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APT61_RS06280 76cef02fbbec3d06ed9b4f80409cbb58 291 PANTHER PTHR30404 38 285 2.2E-202 T 22-04-2016 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 SUPERFAMILY SSF51735 202 446 3.01E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 PANTHER PTHR11606:SF4 7 447 5.2E-250 T 22-04-2016 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 184 2.0E-48 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 8.2E-87 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 Gene3D G3DSA:3.40.50.720 209 372 5.0E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 PANTHER PTHR11606 7 447 5.2E-250 T 22-04-2016 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 SUPERFAMILY SSF53223 7 196 1.44E-72 T 22-04-2016 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 Gene3D G3DSA:1.10.285.10 373 446 1.4E-24 T 22-04-2016 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 Gene3D G3DSA:1.10.285.10 7 67 1.3E-27 T 22-04-2016 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 PIRSF PIRSF000185 22 447 9.0E-115 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 SMART SM00839 204 445 3.3E-94 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 Gene3D G3DSA:3.40.192.10 68 188 3.2E-60 T 22-04-2016 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 6.1E-34 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 6.1E-34 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 6.1E-34 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APT61_RS13235 aada392088bb88bbf27b46dcfcc28df9 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 6.1E-34 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 APT61_RS01655 5c060785da4ddf2433089200b1c69f77 109 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 106 33.086 T 22-04-2016 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 APT61_RS01655 5c060785da4ddf2433089200b1c69f77 109 Pfam PF00581 Rhodanese-like domain 9 98 9.0E-15 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS01655 5c060785da4ddf2433089200b1c69f77 109 Gene3D G3DSA:3.40.250.10 2 100 6.9E-29 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS01655 5c060785da4ddf2433089200b1c69f77 109 PANTHER PTHR12231 22 96 2.6E-12 T 22-04-2016 APT61_RS01655 5c060785da4ddf2433089200b1c69f77 109 SUPERFAMILY SSF52821 2 101 9.69E-28 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS01655 5c060785da4ddf2433089200b1c69f77 109 SMART SM00450 7 102 4.7E-19 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS01805 69dcb848b7653fea685427d57ed1d724 173 SUPERFAMILY SSF52540 4 170 1.11E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01805 69dcb848b7653fea685427d57ed1d724 173 Pfam PF01202 Shikimate kinase 13 170 1.3E-56 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS01805 69dcb848b7653fea685427d57ed1d724 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS01805 69dcb848b7653fea685427d57ed1d724 173 PANTHER PTHR21087 1 173 1.0E-72 T 22-04-2016 APT61_RS01805 69dcb848b7653fea685427d57ed1d724 173 Gene3D G3DSA:3.40.50.300 2 172 2.4E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01805 69dcb848b7653fea685427d57ed1d724 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.293 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS01805 69dcb848b7653fea685427d57ed1d724 173 PRINTS PR01100 Shikimate kinase family signature 7 22 3.5E-29 T 22-04-2016 APT61_RS01805 69dcb848b7653fea685427d57ed1d724 173 PRINTS PR01100 Shikimate kinase family signature 98 115 3.5E-29 T 22-04-2016 APT61_RS01805 69dcb848b7653fea685427d57ed1d724 173 PRINTS PR01100 Shikimate kinase family signature 77 86 3.5E-29 T 22-04-2016 APT61_RS01805 69dcb848b7653fea685427d57ed1d724 173 PRINTS PR01100 Shikimate kinase family signature 31 44 3.5E-29 T 22-04-2016 APT61_RS01805 69dcb848b7653fea685427d57ed1d724 173 PRINTS PR01100 Shikimate kinase family signature 59 67 3.5E-29 T 22-04-2016 APT61_RS13055 524c1f0b602c3b63e18be6d4cf03e09a 310 PANTHER PTHR10584 2 307 3.1E-123 T 22-04-2016 APT61_RS13055 524c1f0b602c3b63e18be6d4cf03e09a 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 304 7.2E-94 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APT61_RS13055 524c1f0b602c3b63e18be6d4cf03e09a 310 Gene3D G3DSA:3.40.1190.20 35 304 1.2E-73 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS13055 524c1f0b602c3b63e18be6d4cf03e09a 310 SUPERFAMILY SSF53613 4 298 2.18E-61 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS13055 524c1f0b602c3b63e18be6d4cf03e09a 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APT61_RS13055 524c1f0b602c3b63e18be6d4cf03e09a 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APT61_RS13055 524c1f0b602c3b63e18be6d4cf03e09a 310 PIRSF PIRSF000535 1 310 1.8E-102 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APT61_RS13055 524c1f0b602c3b63e18be6d4cf03e09a 310 PANTHER PTHR10584:SF54 2 307 3.1E-123 T 22-04-2016 APT61_RS13055 524c1f0b602c3b63e18be6d4cf03e09a 310 Pfam PF00294 pfkB family carbohydrate kinase 19 295 4.1E-61 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APT61_RS06895 bf438c578747cee3d30e5dc50c5d872d 334 SMART SM00448 187 312 1.5E-8 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS06895 bf438c578747cee3d30e5dc50c5d872d 334 SMART SM00260 17 161 2.8E-11 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APT61_RS06895 bf438c578747cee3d30e5dc50c5d872d 334 SUPERFAMILY SSF50341 18 165 1.57E-24 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APT61_RS06895 bf438c578747cee3d30e5dc50c5d872d 334 PIRSF PIRSF002867 1 320 1.9E-102 T 22-04-2016 IPR024181 Chemotaxis response regulator CheV APT61_RS06895 bf438c578747cee3d30e5dc50c5d872d 334 PANTHER PTHR22617 1 177 5.1E-76 T 22-04-2016 APT61_RS06895 bf438c578747cee3d30e5dc50c5d872d 334 PANTHER PTHR22617:SF37 1 177 5.1E-76 T 22-04-2016 APT61_RS06895 bf438c578747cee3d30e5dc50c5d872d 334 Pfam PF01584 CheW-like domain 22 163 1.0E-29 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APT61_RS06895 bf438c578747cee3d30e5dc50c5d872d 334 SUPERFAMILY SSF52172 189 319 5.12E-20 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS06895 bf438c578747cee3d30e5dc50c5d872d 334 Pfam PF00072 Response regulator receiver domain 190 310 9.8E-12 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS06895 bf438c578747cee3d30e5dc50c5d872d 334 Gene3D G3DSA:3.40.50.2300 190 321 2.3E-24 T 22-04-2016 APT61_RS08190 af217d09ffa7184570bf3ee0ec399b4f 250 PANTHER PTHR24220:SF327 5 250 2.6E-141 T 22-04-2016 APT61_RS08190 af217d09ffa7184570bf3ee0ec399b4f 250 SMART SM00382 28 221 6.5E-21 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS08190 af217d09ffa7184570bf3ee0ec399b4f 250 PANTHER PTHR24220 5 250 2.6E-141 T 22-04-2016 APT61_RS08190 af217d09ffa7184570bf3ee0ec399b4f 250 Gene3D G3DSA:3.40.50.300 3 245 7.9E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08190 af217d09ffa7184570bf3ee0ec399b4f 250 SUPERFAMILY SSF52540 4 243 5.07E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08190 af217d09ffa7184570bf3ee0ec399b4f 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS08190 af217d09ffa7184570bf3ee0ec399b4f 250 PIRSF PIRSF039085 1 249 3.9E-110 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APT61_RS08190 af217d09ffa7184570bf3ee0ec399b4f 250 Pfam PF00005 ABC transporter 19 173 4.3E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS03630 fce023b63b447f8eedb397d9e182e660 279 Gene3D G3DSA:2.60.120.280 15 163 1.2E-19 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS03630 fce023b63b447f8eedb397d9e182e660 279 PANTHER PTHR11019 9 274 1.4E-34 T 22-04-2016 APT61_RS03630 fce023b63b447f8eedb397d9e182e660 279 Gene3D G3DSA:1.10.10.60 170 226 4.1E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS03630 fce023b63b447f8eedb397d9e182e660 279 SUPERFAMILY SSF46689 226 276 7.68E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS03630 fce023b63b447f8eedb397d9e182e660 279 SMART SM00342 190 273 2.5E-30 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS03630 fce023b63b447f8eedb397d9e182e660 279 Pfam PF12833 Helix-turn-helix domain 196 274 6.8E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS03630 fce023b63b447f8eedb397d9e182e660 279 SUPERFAMILY SSF46689 177 223 7.79E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS03630 fce023b63b447f8eedb397d9e182e660 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 269 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS03630 fce023b63b447f8eedb397d9e182e660 279 SUPERFAMILY SSF51215 1 161 6.67E-20 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS03630 fce023b63b447f8eedb397d9e182e660 279 Pfam PF02311 AraC-like ligand binding domain 33 150 8.5E-11 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS03630 fce023b63b447f8eedb397d9e182e660 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 257 273 1.8E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS03630 fce023b63b447f8eedb397d9e182e660 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 242 257 1.8E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS03630 fce023b63b447f8eedb397d9e182e660 279 Gene3D G3DSA:1.10.10.60 227 276 2.0E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS21150 a897f8da6221c58d8f64c5e9415f5ece 631 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 147 599 7.2E-225 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APT61_RS21150 a897f8da6221c58d8f64c5e9415f5ece 631 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 147 601 56.375 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APT61_RS21150 a897f8da6221c58d8f64c5e9415f5ece 631 Pfam PF13667 ThiC-associated domain 27 108 3.6E-33 T 22-04-2016 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APT61_RS21150 a897f8da6221c58d8f64c5e9415f5ece 631 PANTHER PTHR30557:SF1 4 106 0.0 T 22-04-2016 APT61_RS21150 a897f8da6221c58d8f64c5e9415f5ece 631 PANTHER PTHR30557:SF1 198 625 0.0 T 22-04-2016 APT61_RS21150 a897f8da6221c58d8f64c5e9415f5ece 631 PANTHER PTHR30557:SF1 140 170 0.0 T 22-04-2016 APT61_RS21150 a897f8da6221c58d8f64c5e9415f5ece 631 Pfam PF01964 Radical SAM ThiC family 148 596 8.1E-200 T 22-04-2016 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890|UniPathway: UPA00060 APT61_RS21150 a897f8da6221c58d8f64c5e9415f5ece 631 PANTHER PTHR30557 4 106 0.0 T 22-04-2016 APT61_RS21150 a897f8da6221c58d8f64c5e9415f5ece 631 PANTHER PTHR30557 198 625 0.0 T 22-04-2016 APT61_RS21150 a897f8da6221c58d8f64c5e9415f5ece 631 PANTHER PTHR30557 140 170 0.0 T 22-04-2016 APT61_RS21265 5d2611b51058c537bd77127e24de16fb 327 SUPERFAMILY SSF52540 3 253 2.3E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21265 5d2611b51058c537bd77127e24de16fb 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 4.2E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS21265 5d2611b51058c537bd77127e24de16fb 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS21265 5d2611b51058c537bd77127e24de16fb 327 Gene3D G3DSA:3.40.50.300 2 255 5.0E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21265 5d2611b51058c537bd77127e24de16fb 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 1.8E-26 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS21265 5d2611b51058c537bd77127e24de16fb 327 Pfam PF00005 ABC transporter 24 181 4.5E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS21265 5d2611b51058c537bd77127e24de16fb 327 SMART SM00382 32 231 9.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS21265 5d2611b51058c537bd77127e24de16fb 327 PANTHER PTHR24220:SF576 5 321 1.4E-230 T 22-04-2016 APT61_RS21265 5d2611b51058c537bd77127e24de16fb 327 PANTHER PTHR24220 5 321 1.4E-230 T 22-04-2016 APT61_RS02655 723f42d1e03b5533d0917ead9fb374be 191 PANTHER PTHR37481:SF1 2 188 3.9E-66 T 22-04-2016 APT61_RS02655 723f42d1e03b5533d0917ead9fb374be 191 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 185 26.918 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 APT61_RS02655 723f42d1e03b5533d0917ead9fb374be 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 9 183 2.1E-52 T 22-04-2016 IPR010664 Lipopolysaccharide assembly, LptC-related APT61_RS02655 723f42d1e03b5533d0917ead9fb374be 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 182 1.1E-51 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 APT61_RS02655 723f42d1e03b5533d0917ead9fb374be 191 PANTHER PTHR37481 2 188 3.9E-66 T 22-04-2016 APT61_RS02655 723f42d1e03b5533d0917ead9fb374be 191 PIRSF PIRSF028513 1 186 3.9E-41 T 22-04-2016 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 APT61_RS02645 60a30b4fbb1d40bef4cd244ca19c4a45 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS02645 60a30b4fbb1d40bef4cd244ca19c4a45 241 SMART SM00382 28 213 7.2E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS02645 60a30b4fbb1d40bef4cd244ca19c4a45 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 4.1E-120 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 APT61_RS02645 60a30b4fbb1d40bef4cd244ca19c4a45 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 5.3E-7 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT61_RS02645 60a30b4fbb1d40bef4cd244ca19c4a45 241 Gene3D G3DSA:3.40.50.300 3 234 7.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02645 60a30b4fbb1d40bef4cd244ca19c4a45 241 PANTHER PTHR24220:SF497 5 238 1.3E-150 T 22-04-2016 APT61_RS02645 60a30b4fbb1d40bef4cd244ca19c4a45 241 SUPERFAMILY SSF52540 4 236 3.36E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02645 60a30b4fbb1d40bef4cd244ca19c4a45 241 PANTHER PTHR24220 5 238 1.3E-150 T 22-04-2016 APT61_RS02645 60a30b4fbb1d40bef4cd244ca19c4a45 241 Pfam PF00005 ABC transporter 20 166 1.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 SUPERFAMILY SSF82714 182 272 5.49E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 SUPERFAMILY SSF82693 566 672 1.57E-29 T 22-04-2016 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1036 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 Gene3D G3DSA:1.10.3850.10 815 1028 7.1E-57 T 22-04-2016 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 Gene3D G3DSA:1.10.3850.10 279 498 4.1E-57 T 22-04-2016 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 SUPERFAMILY SSF82693 138 182 2.96E-24 T 22-04-2016 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 SUPERFAMILY SSF82693 274 330 2.96E-24 T 22-04-2016 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 6.09E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 6.09E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 6.09E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 6.09E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 6.09E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 6.09E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 6.09E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 6.09E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 6.09E-109 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 PANTHER PTHR32063:SF32 1 1037 0.0 T 22-04-2016 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 Gene3D G3DSA:3.30.2090.10 181 275 2.4E-26 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 Gene3D G3DSA:3.30.2090.10 722 811 1.9E-29 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 SUPERFAMILY SSF82866 296 497 8.24E-48 T 22-04-2016 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 SUPERFAMILY SSF82693 39 132 5.93E-26 T 22-04-2016 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 Gene3D G3DSA:3.30.70.1430 568 672 1.7E-34 T 22-04-2016 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 SUPERFAMILY SSF82866 807 1030 1.09E-43 T 22-04-2016 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 Gene3D G3DSA:3.30.70.1430 39 139 4.4E-33 T 22-04-2016 APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 SUPERFAMILY SSF82714 723 809 7.06E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS06235 ada19b63b1270090603d0820b1cb1ee4 1037 PANTHER PTHR32063 1 1037 0.0 T 22-04-2016 APT61_RS08560 8b86f1ed83467951bbdf3494ed6dda6d 246 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 2.6E-105 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like APT61_RS08560 8b86f1ed83467951bbdf3494ed6dda6d 246 Pfam PF01709 Transcriptional regulator 5 235 8.9E-92 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like APT61_RS08560 8b86f1ed83467951bbdf3494ed6dda6d 246 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.029 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like APT61_RS08560 8b86f1ed83467951bbdf3494ed6dda6d 246 SUPERFAMILY SSF75625 3 244 1.96E-95 T 22-04-2016 IPR029072 YebC-like APT61_RS08560 8b86f1ed83467951bbdf3494ed6dda6d 246 Gene3D G3DSA:3.30.70.980 135 204 5.3E-30 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 APT61_RS08560 8b86f1ed83467951bbdf3494ed6dda6d 246 Gene3D G3DSA:1.10.10.200 1 79 1.4E-33 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like APT61_RS08560 8b86f1ed83467951bbdf3494ed6dda6d 246 PANTHER PTHR12532 1 240 3.2E-116 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like APT61_RS08560 8b86f1ed83467951bbdf3494ed6dda6d 246 Gene3D G3DSA:3.30.1270.10 82 134 9.1E-42 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APT61_RS08560 8b86f1ed83467951bbdf3494ed6dda6d 246 Gene3D G3DSA:3.30.1270.10 211 245 9.1E-42 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 APT61_RS10875 0e0601d57027cc23834a51bb6493a595 837 SUPERFAMILY SSF69255 389 478 4.97E-24 T 22-04-2016 APT61_RS10875 0e0601d57027cc23834a51bb6493a595 837 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 497 599 1.3E-31 T 22-04-2016 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain APT61_RS10875 0e0601d57027cc23834a51bb6493a595 837 Gene3D G3DSA:2.40.50.230 397 478 4.6E-22 T 22-04-2016 IPR006531 Gp5 N-terminal APT61_RS10875 0e0601d57027cc23834a51bb6493a595 837 Gene3D G3DSA:3.55.50.10 118 214 3.0E-21 T 22-04-2016 APT61_RS10875 0e0601d57027cc23834a51bb6493a595 837 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 31 521 6.3E-65 T 22-04-2016 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset APT61_RS10875 0e0601d57027cc23834a51bb6493a595 837 PANTHER PTHR32305 34 586 6.8E-43 T 22-04-2016 APT61_RS10875 0e0601d57027cc23834a51bb6493a595 837 PANTHER PTHR32305:SF7 34 586 6.8E-43 T 22-04-2016 APT61_RS10875 0e0601d57027cc23834a51bb6493a595 837 SUPERFAMILY SSF69279 27 210 5.21E-40 T 22-04-2016 APT61_RS10875 0e0601d57027cc23834a51bb6493a595 837 SUPERFAMILY SSF69279 219 390 6.12E-31 T 22-04-2016 APT61_RS10875 0e0601d57027cc23834a51bb6493a595 837 Pfam PF05954 Phage late control gene D protein (GPD) 37 360 1.4E-52 T 22-04-2016 APT61_RS10875 0e0601d57027cc23834a51bb6493a595 837 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 30 523 2.2E-83 T 22-04-2016 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein APT61_RS10875 0e0601d57027cc23834a51bb6493a595 837 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 617 765 1.5E-38 T 22-04-2016 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal APT61_RS06040 971948eca04995d719c9f1f7ea0cdba8 517 Gene3D G3DSA:1.20.1250.20 20 204 1.6E-16 T 22-04-2016 APT61_RS06040 971948eca04995d719c9f1f7ea0cdba8 517 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 155 167 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS06040 971948eca04995d719c9f1f7ea0cdba8 517 SUPERFAMILY SSF103473 12 312 4.58E-24 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS06040 971948eca04995d719c9f1f7ea0cdba8 517 SUPERFAMILY SSF103473 320 497 1.96E-11 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS06040 971948eca04995d719c9f1f7ea0cdba8 517 PANTHER PTHR11654 5 229 6.3E-131 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS06040 971948eca04995d719c9f1f7ea0cdba8 517 PANTHER PTHR11654 281 468 6.3E-131 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS06040 971948eca04995d719c9f1f7ea0cdba8 517 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 11 501 4.7E-109 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 APT61_RS06040 971948eca04995d719c9f1f7ea0cdba8 517 PANTHER PTHR11654:SF119 5 229 6.3E-131 T 22-04-2016 APT61_RS06040 971948eca04995d719c9f1f7ea0cdba8 517 PANTHER PTHR11654:SF119 281 468 6.3E-131 T 22-04-2016 APT61_RS06040 971948eca04995d719c9f1f7ea0cdba8 517 Gene3D G3DSA:1.20.1250.20 299 510 5.4E-6 T 22-04-2016 APT61_RS06040 971948eca04995d719c9f1f7ea0cdba8 517 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 79 103 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS06040 971948eca04995d719c9f1f7ea0cdba8 517 Pfam PF00854 POT family 91 463 3.0E-64 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS17130 09390ced391875952cfad857c81999a1 644 PANTHER PTHR11669:SF0 1 435 6.3E-188 T 22-04-2016 APT61_RS17130 09390ced391875952cfad857c81999a1 644 PANTHER PTHR11669 1 435 6.3E-188 T 22-04-2016 APT61_RS17130 09390ced391875952cfad857c81999a1 644 Gene3D G3DSA:1.20.272.10 243 361 8.7E-49 T 22-04-2016 APT61_RS17130 09390ced391875952cfad857c81999a1 644 Gene3D G3DSA:1.10.8.60 167 242 1.7E-32 T 22-04-2016 APT61_RS17130 09390ced391875952cfad857c81999a1 644 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 501 641 5.9E-59 T 22-04-2016 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS17130 09390ced391875952cfad857c81999a1 644 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 417 499 1.6E-20 T 22-04-2016 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS17130 09390ced391875952cfad857c81999a1 644 SUPERFAMILY SSF52540 35 222 4.86E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17130 09390ced391875952cfad857c81999a1 644 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 2.1E-132 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 APT61_RS17130 09390ced391875952cfad857c81999a1 644 Pfam PF13177 DNA polymerase III, delta subunit 20 178 4.0E-42 T 22-04-2016 APT61_RS17130 09390ced391875952cfad857c81999a1 644 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.8E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APT61_RS17130 09390ced391875952cfad857c81999a1 644 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.8E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APT61_RS17130 09390ced391875952cfad857c81999a1 644 Gene3D G3DSA:3.40.50.300 15 166 1.1E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17130 09390ced391875952cfad857c81999a1 644 SUPERFAMILY SSF48019 243 366 7.14E-36 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APT61_RS17130 09390ced391875952cfad857c81999a1 644 SMART SM00382 37 178 1.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS17130 09390ced391875952cfad857c81999a1 644 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 234 361 1.1E-31 T 22-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 SMART SM00387 581 692 9.5E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 Gene3D G3DSA:3.30.565.10 521 693 3.7E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 PANTHER PTHR24423 355 695 3.6E-246 T 22-04-2016 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 Pfam PF00072 Response regulator receiver domain 827 936 3.0E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 Gene3D G3DSA:1.10.287.130 473 520 4.9E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 SMART SM00388 469 534 5.1E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 Gene3D G3DSA:3.30.450.20 427 472 6.4E-6 T 22-04-2016 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 SUPERFAMILY SSF47384 453 535 6.08E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 631 1.9E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 689 1.9E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 645 1.9E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 1.9E-17 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 PANTHER PTHR24423 824 947 3.6E-246 T 22-04-2016 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 PANTHER PTHR24423 28 56 3.6E-246 T 22-04-2016 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 PANTHER PTHR24423 734 786 3.6E-246 T 22-04-2016 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 Gene3D G3DSA:3.40.50.2300 822 944 3.1E-40 T 22-04-2016 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 SUPERFAMILY SSF52172 701 815 1.62E-38 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 SMART SM00448 825 936 6.5E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 709 799 4.3E-31 T 22-04-2016 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 690 5.3E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 941 26.898 T 22-04-2016 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 PANTHER PTHR24423:SF382 824 947 3.6E-246 T 22-04-2016 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 PANTHER PTHR24423:SF382 28 56 3.6E-246 T 22-04-2016 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 PANTHER PTHR24423:SF382 355 695 3.6E-246 T 22-04-2016 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 PANTHER PTHR24423:SF382 734 786 3.6E-246 T 22-04-2016 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 SUPERFAMILY SSF52172 824 945 1.71E-38 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 533 1.1E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS07005 9e1cdc23011199481bb183f1898c02be 948 SUPERFAMILY SSF55874 523 694 6.16E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 Gene3D G3DSA:3.30.160.70 181 267 5.0E-30 T 22-04-2016 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 SUPERFAMILY SSF46689 86 133 7.17E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 Gene3D G3DSA:1.10.10.60 138 180 8.8E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 SUPERFAMILY SSF53155 188 267 2.75E-17 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 SMART SM00342 99 181 2.8E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 Pfam PF12833 Helix-turn-helix domain 105 182 2.6E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 269 348 2.4E-34 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 Pfam PF02805 Metal binding domain of Ada 11 75 2.1E-31 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 PANTHER PTHR10815 157 348 5.3E-111 T 22-04-2016 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 Gene3D G3DSA:3.40.10.10 6 88 1.9E-34 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 SUPERFAMILY SSF57884 4 92 2.62E-33 T 22-04-2016 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 189 266 3.9E-12 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 Gene3D G3DSA:1.10.10.10 268 349 3.0E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 270 348 1.5E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 PIRSF PIRSF000409 1 354 2.5E-133 T 22-04-2016 IPR016221 Bifunctional regulatory protein Ada APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 319 325 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 SUPERFAMILY SSF46767 268 349 3.14E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 Gene3D G3DSA:1.10.10.60 89 137 2.0E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS07030 2e01851fff337ef08c31aacb381385be 354 PANTHER PTHR10815:SF9 157 348 5.3E-111 T 22-04-2016 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 Gene3D G3DSA:3.30.2090.10 724 812 1.2E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 SUPERFAMILY SSF82693 135 182 2.62E-27 T 22-04-2016 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 SUPERFAMILY SSF82693 274 330 2.62E-27 T 22-04-2016 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 3.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 3.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 3.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 3.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 3.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 3.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 3.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 3.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 3.1E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 SUPERFAMILY SSF82866 809 1033 1.57E-44 T 22-04-2016 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 SUPERFAMILY SSF82714 725 812 2.62E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 PANTHER PTHR32063 1 1045 0.0 T 22-04-2016 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 Gene3D G3DSA:1.10.3850.10 817 1031 1.4E-56 T 22-04-2016 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 Gene3D G3DSA:1.10.3850.10 278 498 9.3E-60 T 22-04-2016 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 SUPERFAMILY SSF82693 38 132 1.4E-27 T 22-04-2016 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 SUPERFAMILY SSF82693 567 671 1.99E-33 T 22-04-2016 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1043 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 Gene3D G3DSA:3.30.2090.10 181 275 5.7E-26 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 Gene3D G3DSA:3.30.70.1430 38 140 8.9E-36 T 22-04-2016 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 SUPERFAMILY SSF82866 296 497 6.02E-49 T 22-04-2016 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 PANTHER PTHR32063:SF13 1 1045 0.0 T 22-04-2016 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 Gene3D G3DSA:3.30.70.1430 569 671 2.4E-41 T 22-04-2016 APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 SUPERFAMILY SSF82714 182 271 6.54E-22 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS17165 58bc6e1e038c079205e7fbe3b2905c1e 1046 Pfam PF00873 AcrB/AcrD/AcrF family 1 1030 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS02150 4844915a1fc98faefdc0aa4e35a30142 59 PIRSF PIRSF002211 1 59 1.0E-28 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APT61_RS02150 4844915a1fc98faefdc0aa4e35a30142 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 21.776 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APT61_RS02150 4844915a1fc98faefdc0aa4e35a30142 59 SUPERFAMILY SSF55129 3 59 6.93E-21 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APT61_RS02150 4844915a1fc98faefdc0aa4e35a30142 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 51 2.5E-18 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APT61_RS02150 4844915a1fc98faefdc0aa4e35a30142 59 Gene3D G3DSA:3.30.1390.20 2 59 2.1E-29 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain APT61_RS02150 4844915a1fc98faefdc0aa4e35a30142 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 1.5E-27 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 APT61_RS02150 4844915a1fc98faefdc0aa4e35a30142 59 PANTHER PTHR15892 1 59 3.0E-29 T 22-04-2016 APT61_RS02150 4844915a1fc98faefdc0aa4e35a30142 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 22-04-2016 IPR018038 Ribosomal protein L30, conserved site APT61_RS21885 0153c3ff3c452c50f0c114dc09e45196 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 3.9E-20 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS21885 0153c3ff3c452c50f0c114dc09e45196 104 PANTHER PTHR34581:SF2 3 104 2.9E-41 T 22-04-2016 APT61_RS21885 0153c3ff3c452c50f0c114dc09e45196 104 SUPERFAMILY SSF52794 1 101 1.8E-35 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS21885 0153c3ff3c452c50f0c114dc09e45196 104 PANTHER PTHR34581 3 104 2.9E-41 T 22-04-2016 APT61_RS21885 0153c3ff3c452c50f0c114dc09e45196 104 Gene3D G3DSA:3.40.50.270 1 102 2.7E-39 T 22-04-2016 APT61_RS16035 39b962c043147b2bcd8f7fc384bd7eb0 454 PANTHER PTHR23242 2 330 6.9E-15 T 22-04-2016 APT61_RS16035 39b962c043147b2bcd8f7fc384bd7eb0 454 TIGRFAM TIGR02794 tolA_full: protein TolA 228 453 7.0E-42 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 APT61_RS16035 39b962c043147b2bcd8f7fc384bd7eb0 454 TIGRFAM TIGR02794 tolA_full: protein TolA 12 247 2.9E-43 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 APT61_RS16035 39b962c043147b2bcd8f7fc384bd7eb0 454 Pfam PF06519 TolA C-terminal 360 452 2.4E-35 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 APT61_RS16035 39b962c043147b2bcd8f7fc384bd7eb0 454 Gene3D G3DSA:3.30.1150.10 357 453 1.2E-39 T 22-04-2016 APT61_RS16035 39b962c043147b2bcd8f7fc384bd7eb0 454 SUPERFAMILY SSF74653 367 454 1.35E-19 T 22-04-2016 APT61_RS06285 9e24cd43be6759268ee64ff0b76595cd 141 PANTHER PTHR23091 1 129 6.8E-26 T 22-04-2016 APT61_RS06285 9e24cd43be6759268ee64ff0b76595cd 141 Gene3D G3DSA:3.40.630.30 1 123 2.1E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS06285 9e24cd43be6759268ee64ff0b76595cd 141 SUPERFAMILY SSF55729 1 130 6.87E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS06285 9e24cd43be6759268ee64ff0b76595cd 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 47.426 T 22-04-2016 IPR023072 Acetyltransferase, YpeA GO:0016747 APT61_RS06285 9e24cd43be6759268ee64ff0b76595cd 141 Pfam PF00583 Acetyltransferase (GNAT) family 48 124 2.3E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS16845 ba44360c6c96c1f40225850bf6d94f47 367 PANTHER PTHR15032 64 365 8.3E-78 T 22-04-2016 APT61_RS16845 ba44360c6c96c1f40225850bf6d94f47 367 SMART SM00849 109 315 4.8E-5 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS16845 ba44360c6c96c1f40225850bf6d94f47 367 SUPERFAMILY SSF56281 73 333 1.57E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS16845 ba44360c6c96c1f40225850bf6d94f47 367 PANTHER PTHR15032:SF4 64 365 8.3E-78 T 22-04-2016 APT61_RS16845 ba44360c6c96c1f40225850bf6d94f47 367 Pfam PF12706 Beta-lactamase superfamily domain 121 315 4.7E-43 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS16845 ba44360c6c96c1f40225850bf6d94f47 367 Gene3D G3DSA:3.60.15.10 65 367 3.1E-95 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 SUPERFAMILY SSF109604 251 432 1.35E-68 T 22-04-2016 APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 SUPERFAMILY SSF109604 31 134 1.35E-68 T 22-04-2016 APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 SUPERFAMILY SSF109604 182 215 1.35E-68 T 22-04-2016 APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 SUPERFAMILY SSF109604 483 501 1.35E-68 T 22-04-2016 APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 501 1.8E-138 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 Gene3D G3DSA:1.10.3210.10 4 122 9.0E-71 T 22-04-2016 IPR006674 HD domain APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 Gene3D G3DSA:1.10.3210.10 183 268 9.0E-71 T 22-04-2016 IPR006674 HD domain APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 Gene3D G3DSA:1.10.3410.10 269 390 7.1E-33 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 SMART SM00471 62 282 6.9E-12 T 22-04-2016 IPR003607 HD/PDEase domain APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 Pfam PF01966 HD domain 66 142 1.8E-10 T 22-04-2016 IPR006674 HD domain APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 PANTHER PTHR11373 25 142 2.6E-89 T 22-04-2016 APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 PANTHER PTHR11373 182 442 2.6E-89 T 22-04-2016 APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 PANTHER PTHR11373:SF29 25 142 2.6E-89 T 22-04-2016 APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 PANTHER PTHR11373:SF29 182 442 2.6E-89 T 22-04-2016 APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 504 51.186 T 22-04-2016 IPR020779 Deoxyguanosinetriphosphate triphosphohydrolase, proteobacteria GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 Gene3D G3DSA:1.10.3550.10 391 503 3.5E-33 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain APT61_RS18295 8307fa008963c3a4e6bee9c0e0113d50 504 Gene3D G3DSA:1.10.3550.10 123 158 3.5E-33 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 SUPERFAMILY SSF46689 57 109 8.96E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 SUPERFAMILY SSF46689 6 55 2.54E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 Gene3D G3DSA:1.10.10.60 58 119 1.1E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 Pfam PF12833 Helix-turn-helix domain 27 105 1.5E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 Pfam PF06445 GyrI-like small molecule binding domain 127 288 1.5E-18 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 SMART SM00342 21 104 4.8E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 SMART SM00871 126 288 1.2E-13 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 PANTHER PTHR11019 6 112 7.0E-66 T 22-04-2016 APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 Gene3D G3DSA:1.10.10.60 3 57 1.9E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 Gene3D G3DSA:3.20.80.10 123 289 6.3E-62 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 PANTHER PTHR11019:SF84 6 112 7.0E-66 T 22-04-2016 APT61_RS19085 8f7d2d2205551e7158aa9aa0aaf1edde 289 SUPERFAMILY SSF55136 122 288 9.94E-48 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain APT61_RS07715 b6c2c95254c631c8bafa8155c92a1620 407 SUPERFAMILY SSF53756 1 309 2.02E-40 T 22-04-2016 APT61_RS07715 b6c2c95254c631c8bafa8155c92a1620 407 PANTHER PTHR12526 104 406 3.9E-60 T 22-04-2016 APT61_RS07715 b6c2c95254c631c8bafa8155c92a1620 407 PANTHER PTHR12526 1 78 3.9E-60 T 22-04-2016 APT61_RS07715 b6c2c95254c631c8bafa8155c92a1620 407 Pfam PF00534 Glycosyl transferases group 1 221 389 5.4E-18 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APT61_RS07715 b6c2c95254c631c8bafa8155c92a1620 407 TIGRFAM TIGR04007 wcaI: colanic acid biosynthesis glycosyltransferase WcaI 1 407 7.9E-267 T 22-04-2016 IPR023910 Colanic acid biosynthesis, glycosyl transferase, WcaI UniPathway: UPA00936 APT61_RS07715 b6c2c95254c631c8bafa8155c92a1620 407 Pfam PF13579 Glycosyl transferase 4-like domain 15 204 4.2E-26 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT61_RS07715 b6c2c95254c631c8bafa8155c92a1620 407 Gene3D G3DSA:3.40.50.2000 197 310 1.7E-8 T 22-04-2016 APT61_RS07715 b6c2c95254c631c8bafa8155c92a1620 407 PANTHER PTHR12526:SF320 104 406 3.9E-60 T 22-04-2016 APT61_RS07715 b6c2c95254c631c8bafa8155c92a1620 407 PANTHER PTHR12526:SF320 1 78 3.9E-60 T 22-04-2016 APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 Gene3D G3DSA:3.30.420.140 328 450 1.4E-49 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 Gene3D G3DSA:1.10.10.650 2 110 5.4E-46 T 22-04-2016 IPR023319 Tex-like protein, HTH domain APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 Pfam PF12836 Helix-hairpin-helix motif 491 555 1.0E-28 T 22-04-2016 APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 Pfam PF09371 Tex-like protein N-terminal domain 10 194 1.0E-69 T 22-04-2016 IPR018974 Tex-like protein, N-terminal APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 SUPERFAMILY SSF50249 637 723 1.27E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 SMART SM00316 649 720 8.4E-26 T 22-04-2016 IPR022967 RNA-binding domain, S1 APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 SUPERFAMILY SSF47781 470 558 3.11E-28 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 Gene3D G3DSA:1.10.3500.10 451 498 1.1E-103 T 22-04-2016 IPR023323 Tex-like domain APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 Gene3D G3DSA:1.10.3500.10 111 323 1.1E-103 T 22-04-2016 IPR023323 Tex-like domain APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 SUPERFAMILY SSF158832 3 322 8.76E-120 T 22-04-2016 APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 Pfam PF16921 Tex protein YqgF-like domain 328 451 5.6E-50 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 Gene3D G3DSA:1.10.150.310 499 630 4.4E-48 T 22-04-2016 IPR023097 Tex RuvX-like domain APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 SUPERFAMILY SSF53098 323 469 9.1E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 PANTHER PTHR10724 1 744 0.0 T 22-04-2016 APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 Pfam PF00575 S1 RNA binding domain 651 720 2.7E-23 T 22-04-2016 IPR003029 S1 domain GO:0003676 APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 PANTHER PTHR10724:SF1 1 744 0.0 T 22-04-2016 APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 SUPERFAMILY SSF47781 560 632 5.78E-19 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 SMART SM00732 327 424 6.4E-36 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APT61_RS01725 c43a036267c88d9e93f1f3d181ade2eb 774 Gene3D G3DSA:2.40.50.140 633 720 3.6E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 Gene3D G3DSA:1.20.1250.20 216 410 1.7E-46 T 22-04-2016 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 Gene3D G3DSA:1.20.1250.20 10 199 7.5E-37 T 22-04-2016 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 SUPERFAMILY SSF103473 9 409 1.13E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 Pfam PF01306 LacY proton/sugar symporter 9 411 2.5E-198 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 11 406 6.8E-210 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 ProSitePatterns PS00897 LacY family proton/sugar symporters signature 2. 285 299 - T 22-04-2016 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 PANTHER PTHR23522:SF3 7 423 4.2E-77 T 22-04-2016 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 PANTHER PTHR23522 7 423 4.2E-77 T 22-04-2016 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 ProSitePatterns PS00896 LacY family proton/sugar symporters signature 1. 69 83 - T 22-04-2016 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 PRINTS PR00174 LacY proton/sugar symporter family signature 219 247 8.2E-100 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 PRINTS PR00174 LacY proton/sugar symporter family signature 351 371 8.2E-100 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 PRINTS PR00174 LacY proton/sugar symporter family signature 265 286 8.2E-100 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 PRINTS PR00174 LacY proton/sugar symporter family signature 289 315 8.2E-100 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 PRINTS PR00174 LacY proton/sugar symporter family signature 73 102 8.2E-100 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 PRINTS PR00174 LacY proton/sugar symporter family signature 150 168 8.2E-100 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 PRINTS PR00174 LacY proton/sugar symporter family signature 108 130 8.2E-100 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS00390 75c37e71c06d6f62fd523489b2d82d59 424 PRINTS PR00174 LacY proton/sugar symporter family signature 320 339 8.2E-100 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS05950 b3f30894a78975f8664ad4f8da0d61c2 111 Gene3D G3DSA:3.10.20.30 5 108 1.9E-34 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS05950 b3f30894a78975f8664ad4f8da0d61c2 111 PRINTS PR00355 Adrenodoxin signature 83 91 2.2E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 APT61_RS05950 b3f30894a78975f8664ad4f8da0d61c2 111 PRINTS PR00355 Adrenodoxin signature 42 52 2.2E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 APT61_RS05950 b3f30894a78975f8664ad4f8da0d61c2 111 PRINTS PR00355 Adrenodoxin signature 60 74 2.2E-10 T 22-04-2016 IPR001055 Adrenodoxin GO:0009055|GO:0051537 APT61_RS05950 b3f30894a78975f8664ad4f8da0d61c2 111 SUPERFAMILY SSF54292 4 109 2.06E-33 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS05950 b3f30894a78975f8664ad4f8da0d61c2 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 22-04-2016 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 APT61_RS05950 b3f30894a78975f8664ad4f8da0d61c2 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 2.6E-61 T 22-04-2016 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 APT61_RS05950 b3f30894a78975f8664ad4f8da0d61c2 111 PANTHER PTHR23426 7 110 1.7E-40 T 22-04-2016 APT61_RS05950 b3f30894a78975f8664ad4f8da0d61c2 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 14 92 5.7E-14 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS04665 580a57848033d7bbcab79238501e974e 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 1.7E-52 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 APT61_RS04665 580a57848033d7bbcab79238501e974e 244 PANTHER PTHR23293:SF5 5 244 1.2E-98 T 22-04-2016 APT61_RS04665 580a57848033d7bbcab79238501e974e 244 PANTHER PTHR23293 5 244 1.2E-98 T 22-04-2016 APT61_RS04665 580a57848033d7bbcab79238501e974e 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 2.3E-95 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 APT61_RS04665 580a57848033d7bbcab79238501e974e 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 2.4E-102 T 22-04-2016 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 APT61_RS04665 580a57848033d7bbcab79238501e974e 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 3 243 40.466 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 APT61_RS04665 580a57848033d7bbcab79238501e974e 244 PIRSF PIRSF000857 5 244 1.4E-55 T 22-04-2016 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8|UniPathway: UPA00140 APT61_RS04665 580a57848033d7bbcab79238501e974e 244 Gene3D G3DSA:3.40.50.620 10 216 2.1E-64 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS04665 580a57848033d7bbcab79238501e974e 244 SUPERFAMILY SSF52402 21 208 1.37E-54 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 Gene3D G3DSA:2.20.25.90 52 98 2.5E-32 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 Gene3D G3DSA:3.40.50.740 592 778 5.5E-61 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 Gene3D G3DSA:4.10.1200.10 1 28 1.3E-17 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 PANTHER PTHR11615:SF165 696 835 0.0 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 PANTHER PTHR11615:SF165 34 413 0.0 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 PANTHER PTHR11615:SF165 994 1228 0.0 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 PANTHER PTHR11615:SF165 851 876 0.0 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 Gene3D G3DSA:3.40.228.10 486 591 7.5E-78 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 Gene3D G3DSA:3.40.228.10 218 336 7.5E-78 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 4 40 7.7E-16 T 22-04-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 Gene3D G3DSA:3.40.50.740 108 117 3.4E-4 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 Gene3D G3DSA:3.40.50.740 149 205 3.4E-4 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 PANTHER PTHR11615 696 835 0.0 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 PANTHER PTHR11615 34 413 0.0 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 PANTHER PTHR11615 994 1228 0.0 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 PANTHER PTHR11615 851 876 0.0 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1234 0.0 T 22-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 Gene3D G3DSA:3.90.55.10 779 835 2.4E-7 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 Gene3D G3DSA:2.40.40.20 1054 1232 2.8E-44 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 776 793 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1124 1151 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 SMART SM00926 43 105 6.6E-8 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 SUPERFAMILY SSF50692 1082 1233 5.42E-46 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 SUPERFAMILY SSF53706 5 1069 0.0 T 22-04-2016 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 Pfam PF01568 Molydopterin dinucleotide binding domain 1087 1199 1.0E-20 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS11005 7cad7e085b1adbd0139a8264b33479d4 1246 Pfam PF00384 Molybdopterin oxidoreductase 108 832 3.4E-167 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS02470 d07caa295e53e062e073ba16c9974758 87 Pfam PF07338 Protein of unknown function (DUF1471) 35 87 3.5E-21 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS02470 d07caa295e53e062e073ba16c9974758 87 PANTHER PTHR34156 2 87 5.1E-52 T 22-04-2016 APT61_RS02470 d07caa295e53e062e073ba16c9974758 87 SUPERFAMILY SSF159871 3 87 1.44E-26 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS02470 d07caa295e53e062e073ba16c9974758 87 PANTHER PTHR34156:SF5 2 87 5.1E-52 T 22-04-2016 APT61_RS02470 d07caa295e53e062e073ba16c9974758 87 Gene3D G3DSA:3.30.1660.10 18 87 3.2E-30 T 22-04-2016 IPR025543 Dodecin-like APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PANTHER PTHR22912:SF160 1 459 6.3E-274 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 8.1E-42 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 8.1E-42 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 8.1E-42 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 8.1E-42 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 8.1E-42 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.9E-70 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.9E-70 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.9E-70 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.9E-70 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.9E-70 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.9E-70 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.9E-70 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.9E-70 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.9E-70 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 Gene3D G3DSA:3.50.50.60 151 271 2.5E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 4.0E-150 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PANTHER PTHR22912 1 459 6.3E-274 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 SUPERFAMILY SSF55424 343 466 4.47E-39 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 SUPERFAMILY SSF51905 2 337 6.17E-57 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 PIRSF PIRSF000350 1 469 3.4E-88 T 22-04-2016 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 Gene3D G3DSA:3.50.50.60 272 335 8.7E-69 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 Gene3D G3DSA:3.50.50.60 6 149 8.7E-69 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 Gene3D G3DSA:3.30.390.30 336 462 3.1E-44 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 1.3E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APT61_RS18480 217f5e6f3fcebd2be93f62f45c9649d8 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.4E-62 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 3.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 3.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.6E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 PANTHER PTHR24322 10 140 1.2E-82 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 PANTHER PTHR24322 156 192 1.2E-82 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 SUPERFAMILY SSF51735 5 248 4.0E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 PANTHER PTHR24322:SF402 10 140 1.2E-82 T 22-04-2016 APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 PANTHER PTHR24322:SF402 156 192 1.2E-82 T 22-04-2016 APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 246 1.8E-59 T 22-04-2016 APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 9.7E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 9.7E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.7E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 Gene3D G3DSA:3.40.50.720 4 248 3.6E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07330 ed6e5dbf6a40b8d900eccb4fe2b751c6 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS10590 08ed0ab8634bcef77726ae56dea067d7 127 SUPERFAMILY SSF56349 49 124 1.26E-6 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APT61_RS10590 08ed0ab8634bcef77726ae56dea067d7 127 Gene3D G3DSA:1.10.443.10 49 123 1.6E-4 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS04310 ea51e724854816e3581afb0b22e406a2 471 SUPERFAMILY SSF103473 16 458 8.24E-72 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS04310 ea51e724854816e3581afb0b22e406a2 471 PANTHER PTHR23500:SF119 1 469 0.0 T 22-04-2016 APT61_RS04310 ea51e724854816e3581afb0b22e406a2 471 ProSitePatterns PS00216 Sugar transport proteins signature 1. 313 329 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS04310 ea51e724854816e3581afb0b22e406a2 471 PANTHER PTHR23500 1 469 0.0 T 22-04-2016 APT61_RS04310 ea51e724854816e3581afb0b22e406a2 471 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS04310 ea51e724854816e3581afb0b22e406a2 471 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 6 456 1.8E-146 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APT61_RS04310 ea51e724854816e3581afb0b22e406a2 471 Pfam PF00083 Sugar (and other) transporter 25 459 1.1E-131 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APT61_RS04310 ea51e724854816e3581afb0b22e406a2 471 PRINTS PR00171 Sugar transporter signature 115 134 4.7E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APT61_RS04310 ea51e724854816e3581afb0b22e406a2 471 PRINTS PR00171 Sugar transporter signature 32 42 4.7E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APT61_RS04310 ea51e724854816e3581afb0b22e406a2 471 PRINTS PR00171 Sugar transporter signature 268 278 4.7E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APT61_RS04310 ea51e724854816e3581afb0b22e406a2 471 PRINTS PR00171 Sugar transporter signature 384 396 4.7E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APT61_RS04310 ea51e724854816e3581afb0b22e406a2 471 PRINTS PR00171 Sugar transporter signature 361 382 4.7E-20 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APT61_RS04310 ea51e724854816e3581afb0b22e406a2 471 Gene3D G3DSA:1.20.1250.20 236 457 2.5E-19 T 22-04-2016 APT61_RS04310 ea51e724854816e3581afb0b22e406a2 471 Gene3D G3DSA:1.20.1250.20 28 207 6.7E-28 T 22-04-2016 APT61_RS01560 d084c4f8a5f03f7996ce2bcdea3a43f3 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 276 4.5E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS01560 d084c4f8a5f03f7996ce2bcdea3a43f3 281 Gene3D G3DSA:1.10.3720.10 4 270 8.7E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS01560 d084c4f8a5f03f7996ce2bcdea3a43f3 281 PANTHER PTHR32243:SF31 1 279 5.1E-139 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 APT61_RS01560 d084c4f8a5f03f7996ce2bcdea3a43f3 281 PANTHER PTHR32243 1 279 5.1E-139 T 22-04-2016 APT61_RS01560 d084c4f8a5f03f7996ce2bcdea3a43f3 281 SUPERFAMILY SSF161098 4 277 3.55E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS19910 39ba6c8640d78e878690f47b1b94ef8a 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 152 1.4E-71 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 APT61_RS19910 39ba6c8640d78e878690f47b1b94ef8a 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 5.0E-38 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal APT61_RS19910 39ba6c8640d78e878690f47b1b94ef8a 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 96 1.2E-30 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal APT61_RS19910 39ba6c8640d78e878690f47b1b94ef8a 153 Gene3D G3DSA:2.30.30.20 101 152 1.6E-23 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal APT61_RS19910 39ba6c8640d78e878690f47b1b94ef8a 153 SUPERFAMILY SSF54893 2 100 1.96E-35 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal APT61_RS19910 39ba6c8640d78e878690f47b1b94ef8a 153 Gene3D G3DSA:3.30.70.140 2 98 6.2E-38 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal APT61_RS19910 39ba6c8640d78e878690f47b1b94ef8a 153 SUPERFAMILY SSF57825 102 151 3.01E-15 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal APT61_RS19910 39ba6c8640d78e878690f47b1b94ef8a 153 PANTHER PTHR35805 2 153 1.7E-75 T 22-04-2016 APT61_RS19910 39ba6c8640d78e878690f47b1b94ef8a 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 149 4.6E-18 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal APT61_RS19910 39ba6c8640d78e878690f47b1b94ef8a 153 PANTHER PTHR35805:SF1 2 153 1.7E-75 T 22-04-2016 APT61_RS19910 39ba6c8640d78e878690f47b1b94ef8a 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.124 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 APT61_RS10360 9169cf1b0dd7ffd3bc48b2332fdabb1e 431 PANTHER PTHR30588:SF0 3 430 7.7E-115 T 22-04-2016 APT61_RS10360 9169cf1b0dd7ffd3bc48b2332fdabb1e 431 PANTHER PTHR30588 3 430 7.7E-115 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APT61_RS10360 9169cf1b0dd7ffd3bc48b2332fdabb1e 431 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 15 409 9.6E-96 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APT61_RS10360 9169cf1b0dd7ffd3bc48b2332fdabb1e 431 Pfam PF05525 Branched-chain amino acid transport protein 9 417 4.1E-102 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APT61_RS10290 14da09d96a5c391e7c61b8087b2cfaa3 102 PANTHER PTHR33154 43 98 2.3E-16 T 22-04-2016 APT61_RS10290 14da09d96a5c391e7c61b8087b2cfaa3 102 PANTHER PTHR33154 1 25 2.3E-16 T 22-04-2016 APT61_RS10290 14da09d96a5c391e7c61b8087b2cfaa3 102 Pfam PF12840 Helix-turn-helix domain 5 79 1.2E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10290 14da09d96a5c391e7c61b8087b2cfaa3 102 SUPERFAMILY SSF46785 3 98 2.1E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10290 14da09d96a5c391e7c61b8087b2cfaa3 102 SMART SM00418 5 100 7.0E-5 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APT61_RS10290 14da09d96a5c391e7c61b8087b2cfaa3 102 Gene3D G3DSA:1.10.10.10 2 100 9.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 Gene3D G3DSA:3.40.47.10 283 400 1.4E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 Gene3D G3DSA:3.40.47.10 152 199 1.4E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 SUPERFAMILY SSF53901 278 400 1.81E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 Pfam PF00108 Thiolase, N-terminal domain 5 269 7.0E-72 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 PANTHER PTHR18919:SF91 1 401 5.8E-241 T 22-04-2016 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 2 401 3.4E-219 T 22-04-2016 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 SUPERFAMILY SSF53901 3 276 5.0E-80 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 PIRSF PIRSF000429 1 401 3.4E-132 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 PANTHER PTHR18919 1 401 5.8E-241 T 22-04-2016 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 Pfam PF02803 Thiolase, C-terminal domain 277 400 7.9E-45 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 Gene3D G3DSA:3.40.47.10 200 282 8.0E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 Gene3D G3DSA:3.40.47.10 3 125 8.0E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS10070 94a1aad1d9018f190872da9a2f123397 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 9.0E-137 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APT61_RS01825 84b6ec0ad941fa485d07cf6d173f20f5 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APT61_RS01825 84b6ec0ad941fa485d07cf6d173f20f5 225 PANTHER PTHR11749:SF7 2 222 1.5E-141 T 22-04-2016 APT61_RS01825 84b6ec0ad941fa485d07cf6d173f20f5 225 PANTHER PTHR11749 2 222 1.5E-141 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APT61_RS01825 84b6ec0ad941fa485d07cf6d173f20f5 225 Gene3D G3DSA:3.20.20.70 1 221 5.6E-95 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS01825 84b6ec0ad941fa485d07cf6d173f20f5 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.9E-91 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APT61_RS01825 84b6ec0ad941fa485d07cf6d173f20f5 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 4.1E-96 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APT61_RS01825 84b6ec0ad941fa485d07cf6d173f20f5 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APT61_RS01825 84b6ec0ad941fa485d07cf6d173f20f5 225 SUPERFAMILY SSF51366 3 218 8.95E-77 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APT61_RS01825 84b6ec0ad941fa485d07cf6d173f20f5 225 PIRSF PIRSF001461 1 225 3.3E-106 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APT61_RS00600 91e8d3c6b718f242ebd809ddadbd5a70 386 Gene3D G3DSA:3.40.640.10 5 246 3.8E-87 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS00600 91e8d3c6b718f242ebd809ddadbd5a70 386 PANTHER PTHR11808:SF15 1 385 2.5E-183 T 22-04-2016 APT61_RS00600 91e8d3c6b718f242ebd809ddadbd5a70 386 SUPERFAMILY SSF53383 5 381 1.32E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS00600 91e8d3c6b718f242ebd809ddadbd5a70 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APT61_RS00600 91e8d3c6b718f242ebd809ddadbd5a70 386 PIRSF PIRSF001434 1 384 1.4E-130 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APT61_RS00600 91e8d3c6b718f242ebd809ddadbd5a70 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 3.2E-141 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APT61_RS00600 91e8d3c6b718f242ebd809ddadbd5a70 386 Gene3D G3DSA:3.90.1150.10 248 382 4.9E-48 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS00600 91e8d3c6b718f242ebd809ddadbd5a70 386 PANTHER PTHR11808 1 385 2.5E-183 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APT61_RS00600 91e8d3c6b718f242ebd809ddadbd5a70 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 381 3.5E-210 T 22-04-2016 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|UniPathway: UPA00051 APT61_RS21715 574c0e186d9ca9b5b138a86692470b0e 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 1.8E-43 T 22-04-2016 IPR013527 YicC-like, N-terminal APT61_RS21715 574c0e186d9ca9b5b138a86692470b0e 287 PANTHER PTHR30636 1 287 2.7E-113 T 22-04-2016 APT61_RS21715 574c0e186d9ca9b5b138a86692470b0e 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.0E-34 T 22-04-2016 IPR013551 Domain of unknown function DUF1732 APT61_RS21715 574c0e186d9ca9b5b138a86692470b0e 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 1.6E-135 T 22-04-2016 IPR005229 Conserved hypothetical protein CHP00255 APT61_RS08285 a67ac004876eea860c847687b605c292 291 SUPERFAMILY SSF52540 4 66 1.28E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08285 a67ac004876eea860c847687b605c292 291 SUPERFAMILY SSF52540 99 283 1.28E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08285 a67ac004876eea860c847687b605c292 291 ProSitePatterns PS00211 ABC transporters family signature. 184 198 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS08285 a67ac004876eea860c847687b605c292 291 Gene3D G3DSA:3.40.50.300 3 282 1.1E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08285 a67ac004876eea860c847687b605c292 291 SMART SM00382 30 261 2.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS08285 a67ac004876eea860c847687b605c292 291 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 262 283 4.4E-10 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT61_RS08285 a67ac004876eea860c847687b605c292 291 PANTHER PTHR24220:SF358 102 289 1.1E-113 T 22-04-2016 APT61_RS08285 a67ac004876eea860c847687b605c292 291 PANTHER PTHR24220:SF358 7 67 1.1E-113 T 22-04-2016 APT61_RS08285 a67ac004876eea860c847687b605c292 291 PANTHER PTHR24220 102 289 1.1E-113 T 22-04-2016 APT61_RS08285 a67ac004876eea860c847687b605c292 291 PANTHER PTHR24220 7 67 1.1E-113 T 22-04-2016 APT61_RS08285 a67ac004876eea860c847687b605c292 291 Pfam PF00005 ABC transporter 21 211 1.6E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS08470 840612792d42bd919a907ddbddd1fd3d 349 PANTHER PTHR24421 3 349 4.3E-187 T 22-04-2016 APT61_RS08470 840612792d42bd919a907ddbddd1fd3d 349 PANTHER PTHR24421:SF21 3 349 4.3E-187 T 22-04-2016 APT61_RS08470 840612792d42bd919a907ddbddd1fd3d 349 Pfam PF01339 CheB methylesterase 160 336 2.8E-63 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APT61_RS08470 840612792d42bd919a907ddbddd1fd3d 349 SUPERFAMILY SSF52738 156 342 1.27E-75 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APT61_RS08470 840612792d42bd919a907ddbddd1fd3d 349 SUPERFAMILY SSF52172 1 108 4.7E-28 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS08470 840612792d42bd919a907ddbddd1fd3d 349 Gene3D G3DSA:3.40.50.2300 2 108 2.5E-28 T 22-04-2016 APT61_RS08470 840612792d42bd919a907ddbddd1fd3d 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.615 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APT61_RS08470 840612792d42bd919a907ddbddd1fd3d 349 Pfam PF00072 Response regulator receiver domain 6 109 5.8E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS08470 840612792d42bd919a907ddbddd1fd3d 349 PIRSF PIRSF000876 1 346 5.9E-140 T 22-04-2016 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APT61_RS08470 840612792d42bd919a907ddbddd1fd3d 349 SMART SM00448 4 119 3.1E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS08470 840612792d42bd919a907ddbddd1fd3d 349 Gene3D G3DSA:3.40.50.180 155 341 8.9E-86 T 22-04-2016 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 APT61_RS20835 c1f19d016e0a7437b398baabe831aa20 223 Pfam PF00043 Glutathione S-transferase, C-terminal domain 140 205 1.9E-9 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal APT61_RS20835 c1f19d016e0a7437b398baabe831aa20 223 PANTHER PTHR11260:SF282 1 220 6.7E-106 T 22-04-2016 APT61_RS20835 c1f19d016e0a7437b398baabe831aa20 223 SUPERFAMILY SSF47616 82 211 3.68E-22 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS20835 c1f19d016e0a7437b398baabe831aa20 223 PANTHER PTHR11260 1 220 6.7E-106 T 22-04-2016 APT61_RS20835 c1f19d016e0a7437b398baabe831aa20 223 Gene3D G3DSA:1.20.1050.10 86 215 2.4E-23 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS20835 c1f19d016e0a7437b398baabe831aa20 223 SUPERFAMILY SSF52833 1 84 1.08E-20 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS20835 c1f19d016e0a7437b398baabe831aa20 223 Gene3D G3DSA:3.40.30.10 2 85 4.7E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS20835 c1f19d016e0a7437b398baabe831aa20 223 Pfam PF02798 Glutathione S-transferase, N-terminal domain 2 73 2.9E-17 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APT61_RS06940 cf1d881392c044eabb89a8654e119f3a 453 PANTHER PTHR24096 1 447 8.0E-200 T 22-04-2016 APT61_RS06940 cf1d881392c044eabb89a8654e119f3a 453 Pfam PF00501 AMP-binding enzyme 9 353 1.9E-54 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APT61_RS06940 cf1d881392c044eabb89a8654e119f3a 453 Gene3D G3DSA:3.40.50.980 9 144 1.5E-25 T 22-04-2016 APT61_RS06940 cf1d881392c044eabb89a8654e119f3a 453 ProSitePatterns PS00455 Putative AMP-binding domain signature. 137 148 - T 22-04-2016 IPR020845 AMP-binding, conserved site APT61_RS06940 cf1d881392c044eabb89a8654e119f3a 453 SUPERFAMILY SSF56801 8 449 1.09E-97 T 22-04-2016 APT61_RS06940 cf1d881392c044eabb89a8654e119f3a 453 Pfam PF13193 AMP-binding enzyme C-terminal domain 364 427 7.0E-7 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APT61_RS06940 cf1d881392c044eabb89a8654e119f3a 453 Gene3D G3DSA:3.30.300.30 351 447 6.1E-18 T 22-04-2016 APT61_RS06940 cf1d881392c044eabb89a8654e119f3a 453 Gene3D G3DSA:2.30.38.10 289 349 4.1E-8 T 22-04-2016 APT61_RS06940 cf1d881392c044eabb89a8654e119f3a 453 PANTHER PTHR24096:SF109 1 447 8.0E-200 T 22-04-2016 APT61_RS06940 cf1d881392c044eabb89a8654e119f3a 453 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 29 443 1.4E-114 T 22-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APT61_RS06940 cf1d881392c044eabb89a8654e119f3a 453 Gene3D G3DSA:3.40.50.980 145 288 3.8E-23 T 22-04-2016 APT61_RS13375 577ee82002f35ea937f4d41ef5b23298 919 Pfam PF06048 Domain of unknown function (DUF927) 370 650 3.3E-57 T 22-04-2016 IPR009270 Domain of unknown function DUF927 APT61_RS13375 577ee82002f35ea937f4d41ef5b23298 919 SUPERFAMILY SSF57783 16 96 2.07E-11 T 22-04-2016 APT61_RS13375 577ee82002f35ea937f4d41ef5b23298 919 Pfam PF08273 Zinc-binding domain of primase-helicase 37 69 3.9E-12 T 22-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- APT61_RS13375 577ee82002f35ea937f4d41ef5b23298 919 Pfam PF13362 Toprim domain 218 324 6.1E-8 T 22-04-2016 IPR006171 Toprim domain APT61_RS13375 577ee82002f35ea937f4d41ef5b23298 919 SMART SM00778 34 69 9.9E-12 T 22-04-2016 IPR013237 Bacteriophage T7, Gp4, DNA primase/helicase, N-terminal GO:0003896|GO:0004386|GO:0008270 KEGG: 00520+2.7.7.- APT61_RS13000 adcf48b71b15cb9aa670d8882334216c 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 22-04-2016 IPR029759 Glutathione peroxidase active site APT61_RS13000 adcf48b71b15cb9aa670d8882334216c 183 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 22-04-2016 IPR029760 Glutathione peroxidase conserved site APT61_RS13000 adcf48b71b15cb9aa670d8882334216c 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 1.8E-20 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APT61_RS13000 adcf48b71b15cb9aa670d8882334216c 183 PRINTS PR01011 Glutathione peroxidase family signature 143 152 1.8E-20 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APT61_RS13000 adcf48b71b15cb9aa670d8882334216c 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 1.8E-20 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APT61_RS13000 adcf48b71b15cb9aa670d8882334216c 183 PANTHER PTHR11592:SF40 1 182 8.6E-92 T 22-04-2016 APT61_RS13000 adcf48b71b15cb9aa670d8882334216c 183 SUPERFAMILY SSF52833 5 182 1.03E-57 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS13000 adcf48b71b15cb9aa670d8882334216c 183 Pfam PF00255 Glutathione peroxidase 6 111 1.7E-44 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APT61_RS13000 adcf48b71b15cb9aa670d8882334216c 183 PIRSF PIRSF000303 1 183 2.1E-66 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APT61_RS13000 adcf48b71b15cb9aa670d8882334216c 183 PANTHER PTHR11592 1 182 8.6E-92 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APT61_RS13000 adcf48b71b15cb9aa670d8882334216c 183 Gene3D G3DSA:3.40.30.10 5 182 3.9E-66 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS20210 c87c06f83b91b4612855f3ce49d0a133 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 45 3.8E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal APT61_RS20210 c87c06f83b91b4612855f3ce49d0a133 149 Gene3D G3DSA:3.40.5.10 1 52 2.5E-25 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal APT61_RS20210 c87c06f83b91b4612855f3ce49d0a133 149 SUPERFAMILY SSF55658 1 57 4.01E-19 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal APT61_RS20210 c87c06f83b91b4612855f3ce49d0a133 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.0E-58 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS20210 c87c06f83b91b4612855f3ce49d0a133 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal APT61_RS20210 c87c06f83b91b4612855f3ce49d0a133 149 Gene3D G3DSA:3.10.430.100 61 149 1.1E-27 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal APT61_RS20210 c87c06f83b91b4612855f3ce49d0a133 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 1.7E-24 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal APT61_RS20210 c87c06f83b91b4612855f3ce49d0a133 149 SUPERFAMILY SSF55653 60 149 1.44E-24 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal APT61_RS20210 c87c06f83b91b4612855f3ce49d0a133 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.234 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS20210 c87c06f83b91b4612855f3ce49d0a133 149 PANTHER PTHR21368 1 149 1.7E-51 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS00015 0b64663f4d82e34c3301accf69dd7c74 207 PIRSF PIRSF003078 1 206 1.5E-66 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APT61_RS00015 0b64663f4d82e34c3301accf69dd7c74 207 Pfam PF02527 rRNA small subunit methyltransferase G 20 200 4.5E-66 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APT61_RS00015 0b64663f4d82e34c3301accf69dd7c74 207 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 203 2.9E-60 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APT61_RS00015 0b64663f4d82e34c3301accf69dd7c74 207 PANTHER PTHR31760 1 203 4.7E-88 T 22-04-2016 APT61_RS00015 0b64663f4d82e34c3301accf69dd7c74 207 PANTHER PTHR31760:SF0 1 203 4.7E-88 T 22-04-2016 APT61_RS00015 0b64663f4d82e34c3301accf69dd7c74 207 SUPERFAMILY SSF53335 4 205 7.52E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS00015 0b64663f4d82e34c3301accf69dd7c74 207 Gene3D G3DSA:3.40.50.150 4 204 4.4E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS00015 0b64663f4d82e34c3301accf69dd7c74 207 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 201 28.311 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 APT61_RS20840 b921e2a46f1e6cd2e2fcc76d80f25668 152 Gene3D G3DSA:1.10.1660.10 10 65 1.2E-18 T 22-04-2016 APT61_RS20840 b921e2a46f1e6cd2e2fcc76d80f25668 152 Gene3D G3DSA:1.10.1660.10 66 143 6.1E-14 T 22-04-2016 APT61_RS20840 b921e2a46f1e6cd2e2fcc76d80f25668 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 1.6E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS20840 b921e2a46f1e6cd2e2fcc76d80f25668 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 1.6E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS20840 b921e2a46f1e6cd2e2fcc76d80f25668 152 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 1.6E-10 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS20840 b921e2a46f1e6cd2e2fcc76d80f25668 152 Pfam PF00376 MerR family regulatory protein 13 49 8.4E-13 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS20840 b921e2a46f1e6cd2e2fcc76d80f25668 152 Pfam PF09278 MerR, DNA binding 54 119 2.4E-14 T 22-04-2016 IPR015358 Transcription regulator MerR, DNA binding APT61_RS20840 b921e2a46f1e6cd2e2fcc76d80f25668 152 SUPERFAMILY SSF46955 12 134 2.01E-27 T 22-04-2016 IPR009061 Putative DNA-binding domain APT61_RS20840 b921e2a46f1e6cd2e2fcc76d80f25668 152 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS20840 b921e2a46f1e6cd2e2fcc76d80f25668 152 PANTHER PTHR30204 4 142 5.9E-84 T 22-04-2016 APT61_RS20840 b921e2a46f1e6cd2e2fcc76d80f25668 152 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 12 151 3.4E-72 T 22-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 APT61_RS20840 b921e2a46f1e6cd2e2fcc76d80f25668 152 SMART SM00422 12 80 2.2E-22 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS20840 b921e2a46f1e6cd2e2fcc76d80f25668 152 PANTHER PTHR30204:SF0 4 142 5.9E-84 T 22-04-2016 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 APT61_RS16575 0959e508cf85f1b0204382436f35ac47 365 PIRSF PIRSF000112 2 362 9.7E-121 T 22-04-2016 APT61_RS16575 0959e508cf85f1b0204382436f35ac47 365 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 348 2.6E-48 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APT61_RS16575 0959e508cf85f1b0204382436f35ac47 365 PANTHER PTHR11496:SF55 1 363 1.2E-173 T 22-04-2016 APT61_RS16575 0959e508cf85f1b0204382436f35ac47 365 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APT61_RS16575 0959e508cf85f1b0204382436f35ac47 365 Gene3D G3DSA:1.20.1090.10 162 360 2.7E-50 T 22-04-2016 APT61_RS16575 0959e508cf85f1b0204382436f35ac47 365 SUPERFAMILY SSF56796 11 358 6.41E-60 T 22-04-2016 APT61_RS16575 0959e508cf85f1b0204382436f35ac47 365 Gene3D G3DSA:3.40.50.1970 5 160 1.5E-33 T 22-04-2016 APT61_RS16575 0959e508cf85f1b0204382436f35ac47 365 PANTHER PTHR11496 1 363 1.2E-173 T 22-04-2016 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 1.0E-15 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 9.2E-81 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 PIRSF PIRSF000159 1 1174 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 Gene3D G3DSA:4.10.780.10 628 668 7.9E-21 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 Gene3D G3DSA:3.40.50.920 255 411 7.6E-63 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 PANTHER PTHR32154 1 1174 0.0 T 22-04-2016 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 SMART SM00890 622 679 8.4E-30 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 Pfam PF10371 Domain of unknown function 626 678 7.0E-23 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 Pfam PF12838 4Fe-4S dicluster domain 689 757 1.1E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 PANTHER PTHR32154:SF0 1 1174 0.0 T 22-04-2016 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 Gene3D G3DSA:3.40.50.970 796 1166 1.1E-126 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 689 700 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1165 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 SUPERFAMILY SSF52518 794 1166 1.01E-118 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 Gene3D G3DSA:3.40.50.970 1 254 3.2E-111 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 SUPERFAMILY SSF52922 255 411 1.08E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 954 1066 2.2E-8 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 SUPERFAMILY SSF52518 2 254 4.12E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 Gene3D G3DSA:1.10.1060.10 669 770 1.5E-21 T 22-04-2016 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 Gene3D G3DSA:3.40.920.10 418 619 3.6E-77 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 610 1.7E-33 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 SUPERFAMILY SSF54862 665 838 2.39E-22 T 22-04-2016 APT61_RS09965 ad7936eff31f44e99801d205e8776a01 1174 SUPERFAMILY SSF53323 419 668 1.7E-75 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 APT61_RS00525 eec43ed3e43d12d4c97f44c407fee589 502 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APT61_RS00525 eec43ed3e43d12d4c97f44c407fee589 502 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 60.216 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APT61_RS00525 eec43ed3e43d12d4c97f44c407fee589 502 Gene3D G3DSA:3.30.420.40 2 254 3.0E-107 T 22-04-2016 APT61_RS00525 eec43ed3e43d12d4c97f44c407fee589 502 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 5.0E-230 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APT61_RS00525 eec43ed3e43d12d4c97f44c407fee589 502 PANTHER PTHR10196 1 502 8.5E-273 T 22-04-2016 APT61_RS00525 eec43ed3e43d12d4c97f44c407fee589 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APT61_RS00525 eec43ed3e43d12d4c97f44c407fee589 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 3.4E-62 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APT61_RS00525 eec43ed3e43d12d4c97f44c407fee589 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 6.5E-93 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APT61_RS00525 eec43ed3e43d12d4c97f44c407fee589 502 SUPERFAMILY SSF53067 256 498 1.44E-87 T 22-04-2016 APT61_RS00525 eec43ed3e43d12d4c97f44c407fee589 502 Gene3D G3DSA:3.30.420.40 256 498 1.1E-104 T 22-04-2016 APT61_RS00525 eec43ed3e43d12d4c97f44c407fee589 502 SUPERFAMILY SSF53067 5 256 2.94E-95 T 22-04-2016 APT61_RS00525 eec43ed3e43d12d4c97f44c407fee589 502 PIRSF PIRSF000538 4 502 1.2E-178 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APT61_RS00525 eec43ed3e43d12d4c97f44c407fee589 502 PANTHER PTHR10196:SF9 1 502 8.5E-273 T 22-04-2016 APT61_RS05825 aac16d6f5ce4b87de41ff9ea27d68222 282 PANTHER PTHR30514 1 275 7.3E-182 T 22-04-2016 APT61_RS05825 aac16d6f5ce4b87de41ff9ea27d68222 282 Gene3D G3DSA:3.40.50.10490 103 263 3.4E-32 T 22-04-2016 APT61_RS05825 aac16d6f5ce4b87de41ff9ea27d68222 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 3.2E-27 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APT61_RS05825 aac16d6f5ce4b87de41ff9ea27d68222 282 Gene3D G3DSA:1.10.10.10 1 78 6.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05825 aac16d6f5ce4b87de41ff9ea27d68222 282 Pfam PF01380 SIS domain 128 257 7.6E-28 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APT61_RS05825 aac16d6f5ce4b87de41ff9ea27d68222 282 SUPERFAMILY SSF46689 1 77 2.87E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS05825 aac16d6f5ce4b87de41ff9ea27d68222 282 SUPERFAMILY SSF53697 104 279 2.08E-33 T 22-04-2016 APT61_RS05825 aac16d6f5ce4b87de41ff9ea27d68222 282 PANTHER PTHR30514:SF5 1 275 7.3E-182 T 22-04-2016 APT61_RS01315 70c24687db033afe988d47aa3ff3c9b3 341 PANTHER PTHR30238:SF0 216 341 3.4E-128 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 APT61_RS01315 70c24687db033afe988d47aa3ff3c9b3 341 PANTHER PTHR30238:SF0 7 194 3.4E-128 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 APT61_RS01315 70c24687db033afe988d47aa3ff3c9b3 341 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 10 336 3.7E-104 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 APT61_RS01315 70c24687db033afe988d47aa3ff3c9b3 341 Pfam PF03741 Integral membrane protein TerC family 73 299 1.5E-42 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 APT61_RS01315 70c24687db033afe988d47aa3ff3c9b3 341 PANTHER PTHR30238 216 341 3.4E-128 T 22-04-2016 APT61_RS01315 70c24687db033afe988d47aa3ff3c9b3 341 PANTHER PTHR30238 7 194 3.4E-128 T 22-04-2016 APT61_RS17185 f481ffe5d19cc7176165b6923e11d352 522 Pfam PF12792 CSS motif domain associated with EAL 39 243 7.8E-36 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain APT61_RS17185 f481ffe5d19cc7176165b6923e11d352 522 SUPERFAMILY SSF141868 273 514 1.09E-73 T 22-04-2016 IPR001633 EAL domain APT61_RS17185 f481ffe5d19cc7176165b6923e11d352 522 Gene3D G3DSA:3.20.20.450 273 514 2.4E-78 T 22-04-2016 IPR001633 EAL domain APT61_RS17185 f481ffe5d19cc7176165b6923e11d352 522 PANTHER PTHR33121 13 517 6.7E-249 T 22-04-2016 APT61_RS17185 f481ffe5d19cc7176165b6923e11d352 522 Pfam PF00563 EAL domain 274 501 4.6E-64 T 22-04-2016 IPR001633 EAL domain APT61_RS17185 f481ffe5d19cc7176165b6923e11d352 522 SMART SM00052 267 507 2.6E-104 T 22-04-2016 IPR001633 EAL domain APT61_RS17185 f481ffe5d19cc7176165b6923e11d352 522 PANTHER PTHR33121:SF4 13 517 6.7E-249 T 22-04-2016 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 Gene3D G3DSA:1.10.150.20 504 584 1.2E-29 T 22-04-2016 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 PANTHER PTHR23389:SF9 1 531 3.8E-214 T 22-04-2016 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 SMART SM00532 3 448 2.7E-285 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 SUPERFAMILY SSF50249 318 399 2.06E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 Pfam PF14520 Helix-hairpin-helix domain 446 502 2.4E-5 T 22-04-2016 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 SUPERFAMILY SSF52113 596 669 9.32E-19 T 22-04-2016 IPR001357 BRCT domain APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 PIRSF PIRSF001604 1 671 3.4E-251 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 1.6E-10 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 SMART SM00292 595 670 2.1E-13 T 22-04-2016 IPR001357 BRCT domain APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 Gene3D G3DSA:1.10.150.20 435 503 1.1E-27 T 22-04-2016 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 Gene3D G3DSA:3.40.50.10190 594 670 2.8E-26 T 22-04-2016 IPR001357 BRCT domain APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 PANTHER PTHR23389 1 531 3.8E-214 T 22-04-2016 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 SUPERFAMILY SSF47781 404 583 4.82E-60 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 SUPERFAMILY SSF56091 3 316 7.92E-121 T 22-04-2016 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 Hamap MF_01588 DNA ligase [ligA]. 2 669 53.503 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 22-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 SMART SM00278 480 499 2.6 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 SMART SM00278 446 465 24.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 SMART SM00278 512 531 600.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 SMART SM00278 544 563 37.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 2.8E-35 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 Pfam PF12826 Helix-hairpin-helix motif 510 573 1.4E-22 T 22-04-2016 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 665 3.9E-271 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 Gene3D G3DSA:3.30.470.30 119 252 2.4E-50 T 22-04-2016 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 Gene3D G3DSA:1.10.287.610 2 67 8.6E-28 T 22-04-2016 APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 Gene3D G3DSA:2.40.50.140 319 391 2.1E-34 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 596 669 1.0E-12 T 22-04-2016 IPR001357 BRCT domain APT61_RS06365 9cc9d3c67123707244204c67b6f69d9f 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 318 2.5E-137 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 APT61_RS08275 746c6ef6cb01db32e6fd3efc126709f3 524 PANTHER PTHR30443 6 522 1.8E-212 T 22-04-2016 APT61_RS08275 746c6ef6cb01db32e6fd3efc126709f3 524 Pfam PF00884 Sulfatase 218 482 1.2E-36 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APT61_RS08275 746c6ef6cb01db32e6fd3efc126709f3 524 PANTHER PTHR30443:SF4 6 522 1.8E-212 T 22-04-2016 APT61_RS08275 746c6ef6cb01db32e6fd3efc126709f3 524 SUPERFAMILY SSF53649 218 475 3.4E-19 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APT61_RS08275 746c6ef6cb01db32e6fd3efc126709f3 524 Gene3D G3DSA:3.40.720.10 218 485 5.7E-11 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APT61_RS21535 3a2c51f245e0e4e233669cccae380480 257 PANTHER PTHR11751:SF382 94 116 2.1E-48 T 22-04-2016 APT61_RS21535 3a2c51f245e0e4e233669cccae380480 257 PANTHER PTHR11751:SF382 1 74 2.1E-48 T 22-04-2016 APT61_RS21535 3a2c51f245e0e4e233669cccae380480 257 Gene3D G3DSA:1.10.10.10 5 74 3.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS21535 3a2c51f245e0e4e233669cccae380480 257 Pfam PF07729 FCD domain 100 222 2.8E-25 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS21535 3a2c51f245e0e4e233669cccae380480 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 1.2E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS21535 3a2c51f245e0e4e233669cccae380480 257 SMART SM00895 100 224 3.7E-23 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS21535 3a2c51f245e0e4e233669cccae380480 257 SMART SM00345 12 71 1.7E-23 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS21535 3a2c51f245e0e4e233669cccae380480 257 PANTHER PTHR11751 94 116 2.1E-48 T 22-04-2016 APT61_RS21535 3a2c51f245e0e4e233669cccae380480 257 PANTHER PTHR11751 1 74 2.1E-48 T 22-04-2016 APT61_RS21535 3a2c51f245e0e4e233669cccae380480 257 SUPERFAMILY SSF46785 6 75 8.39E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS21535 3a2c51f245e0e4e233669cccae380480 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 7.5E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS21535 3a2c51f245e0e4e233669cccae380480 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 7.5E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS21535 3a2c51f245e0e4e233669cccae380480 257 Gene3D G3DSA:1.20.120.530 96 231 8.0E-29 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS21535 3a2c51f245e0e4e233669cccae380480 257 SUPERFAMILY SSF48008 98 229 4.45E-29 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS21945 e320ef7b701fdb70d51c7a0f59338957 263 SUPERFAMILY SSF100950 87 239 1.57E-12 T 22-04-2016 APT61_RS21945 e320ef7b701fdb70d51c7a0f59338957 263 SMART SM01134 78 239 5.9E-40 T 22-04-2016 APT61_RS21945 e320ef7b701fdb70d51c7a0f59338957 263 PANTHER PTHR30363:SF8 2 260 1.2E-150 T 22-04-2016 APT61_RS21945 e320ef7b701fdb70d51c7a0f59338957 263 Pfam PF08220 DeoR-like helix-turn-helix domain 8 43 1.6E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS21945 e320ef7b701fdb70d51c7a0f59338957 263 Gene3D G3DSA:1.10.10.10 3 42 3.8E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS21945 e320ef7b701fdb70d51c7a0f59338957 263 Pfam PF00455 DeoR C terminal sensor domain 87 238 1.7E-30 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APT61_RS21945 e320ef7b701fdb70d51c7a0f59338957 263 SMART SM00420 8 61 0.0019 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS21945 e320ef7b701fdb70d51c7a0f59338957 263 PANTHER PTHR30363 2 260 1.2E-150 T 22-04-2016 APT61_RS21945 e320ef7b701fdb70d51c7a0f59338957 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APT61_RS15235 73010e375b0d9f220ec4cb00667ce537 525 PANTHER PTHR35894 2 517 8.4E-33 T 22-04-2016 APT61_RS15235 73010e375b0d9f220ec4cb00667ce537 525 SUPERFAMILY SSF47090 438 499 7.06E-6 T 22-04-2016 IPR002477 Peptidoglycan binding-like APT61_RS15235 73010e375b0d9f220ec4cb00667ce537 525 Gene3D G3DSA:1.10.101.10 434 498 5.5E-6 T 22-04-2016 IPR002477 Peptidoglycan binding-like APT61_RS08045 135e4ecfec8c59fb40c92841aa1b48e8 261 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 16 254 3.1E-78 T 22-04-2016 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 APT61_RS08045 135e4ecfec8c59fb40c92841aa1b48e8 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 4.14E-33 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APT61_RS08045 135e4ecfec8c59fb40c92841aa1b48e8 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 4.14E-33 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APT61_RS08045 135e4ecfec8c59fb40c92841aa1b48e8 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 4.14E-33 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APT61_RS08045 135e4ecfec8c59fb40c92841aa1b48e8 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 4.14E-33 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APT61_RS08045 135e4ecfec8c59fb40c92841aa1b48e8 261 PANTHER PTHR30065:SF1 2 261 1.6E-102 T 22-04-2016 APT61_RS08045 135e4ecfec8c59fb40c92841aa1b48e8 261 PANTHER PTHR30065 2 261 1.6E-102 T 22-04-2016 APT61_RS08045 135e4ecfec8c59fb40c92841aa1b48e8 261 Pfam PF01311 Bacterial export proteins, family 1 15 246 1.4E-69 T 22-04-2016 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 APT61_RS03540 f907fbd59e5ae7518affcdd36d4c08bb 951 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 29 275 2.9E-97 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 APT61_RS03540 f907fbd59e5ae7518affcdd36d4c08bb 951 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 552 803 2.1E-102 T 22-04-2016 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 APT61_RS03540 f907fbd59e5ae7518affcdd36d4c08bb 951 SUPERFAMILY SSF81301 8 285 1.64E-89 T 22-04-2016 APT61_RS03540 f907fbd59e5ae7518affcdd36d4c08bb 951 PANTHER PTHR30621 7 945 0.0 T 22-04-2016 APT61_RS03540 f907fbd59e5ae7518affcdd36d4c08bb 951 SUPERFAMILY SSF81301 524 812 1.83E-89 T 22-04-2016 APT61_RS03540 f907fbd59e5ae7518affcdd36d4c08bb 951 SUPERFAMILY SSF81593 286 435 2.82E-46 T 22-04-2016 APT61_RS03540 f907fbd59e5ae7518affcdd36d4c08bb 951 SUPERFAMILY SSF81593 817 942 4.63E-33 T 22-04-2016 APT61_RS03540 f907fbd59e5ae7518affcdd36d4c08bb 951 Hamap MF_00802 Glutamate-ammonia-ligase adenylyltransferase [glnE]. 26 944 19.967 T 22-04-2016 IPR023057 Glutamate-ammonia-ligase adenylyltransferase GO:0008882 APT61_RS03540 f907fbd59e5ae7518affcdd36d4c08bb 951 Gene3D G3DSA:3.30.460.10 638 810 5.2E-63 T 22-04-2016 APT61_RS03540 f907fbd59e5ae7518affcdd36d4c08bb 951 Gene3D G3DSA:3.30.460.10 112 284 4.9E-62 T 22-04-2016 APT61_RS03540 f907fbd59e5ae7518affcdd36d4c08bb 951 Pfam PF08335 GlnD PII-uridylyltransferase 824 925 1.0E-11 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APT61_RS03540 f907fbd59e5ae7518affcdd36d4c08bb 951 Pfam PF08335 GlnD PII-uridylyltransferase 296 435 2.6E-45 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APT61_RS16110 300146b79969336692ef8c9268b353ce 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 2.8E-92 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APT61_RS16110 300146b79969336692ef8c9268b353ce 238 SUPERFAMILY SSF54292 1 106 3.84E-30 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS16110 300146b79969336692ef8c9268b353ce 238 PANTHER PTHR11921 4 236 1.5E-132 T 22-04-2016 APT61_RS16110 300146b79969336692ef8c9268b353ce 238 Gene3D G3DSA:1.10.1060.10 108 236 1.8E-46 T 22-04-2016 APT61_RS16110 300146b79969336692ef8c9268b353ce 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS16110 300146b79969336692ef8c9268b353ce 238 Gene3D G3DSA:3.10.20.30 1 106 4.8E-37 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS16110 300146b79969336692ef8c9268b353ce 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 4.9E-32 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APT61_RS16110 300146b79969336692ef8c9268b353ce 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 9.0E-10 T 22-04-2016 APT61_RS16110 300146b79969336692ef8c9268b353ce 238 SUPERFAMILY SSF46548 107 236 4.01E-40 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APT61_RS16110 300146b79969336692ef8c9268b353ce 238 PANTHER PTHR11921:SF29 4 236 1.5E-132 T 22-04-2016 APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 3.3E-71 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 PANTHER PTHR30265 3 180 7.9E-87 T 22-04-2016 APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 SMART SM00739 127 154 7.9E-7 T 22-04-2016 IPR005824 KOW APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 SUPERFAMILY SSF82679 6 116 4.32E-40 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 SMART SM00738 6 115 8.6E-51 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 Pfam PF00467 KOW motif 130 162 4.2E-8 T 22-04-2016 IPR005824 KOW APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 SUPERFAMILY SSF50104 125 180 8.02E-20 T 22-04-2016 IPR008991 Translation protein SH3-like domain APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.779 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 Pfam PF02357 Transcription termination factor nusG 7 112 1.8E-27 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 Gene3D G3DSA:3.30.70.940 6 116 8.9E-43 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 Gene3D G3DSA:2.30.30.30 120 181 3.9E-32 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APT61_RS21220 30f22bfdfdaf577cf6f78f3e77d25c02 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 APT61_RS18510 4d64b93abafafdb9f1265831070c0496 316 Pfam PF04616 Glycosyl hydrolases family 43 5 306 7.4E-75 T 22-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APT61_RS18510 4d64b93abafafdb9f1265831070c0496 316 SUPERFAMILY SSF75005 5 312 5.27E-68 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APT61_RS18510 4d64b93abafafdb9f1265831070c0496 316 PANTHER PTHR22925:SF12 3 315 3.9E-117 T 22-04-2016 APT61_RS18510 4d64b93abafafdb9f1265831070c0496 316 Gene3D G3DSA:2.115.10.20 2 315 9.9E-100 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APT61_RS18510 4d64b93abafafdb9f1265831070c0496 316 PIRSF PIRSF025414 1 316 1.9E-143 T 22-04-2016 IPR016828 Alpha-L-arabinofuranosidase KEGG: 00520+3.2.1.55|UniPathway: UPA00667 APT61_RS18510 4d64b93abafafdb9f1265831070c0496 316 PANTHER PTHR22925 3 315 3.9E-117 T 22-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APT61_RS07300 93388ef4dbb9f0a215c80905895e64de 259 Pfam PF00557 Metallopeptidase family M24 16 243 2.7E-50 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS07300 93388ef4dbb9f0a215c80905895e64de 259 PANTHER PTHR10804:SF75 3 259 1.4E-115 T 22-04-2016 APT61_RS07300 93388ef4dbb9f0a215c80905895e64de 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 70 83 5.0E-18 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APT61_RS07300 93388ef4dbb9f0a215c80905895e64de 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 5.0E-18 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APT61_RS07300 93388ef4dbb9f0a215c80905895e64de 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 163 175 5.0E-18 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APT61_RS07300 93388ef4dbb9f0a215c80905895e64de 259 PRINTS PR00599 Methionine aminopeptidase-1 signature 93 109 5.0E-18 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APT61_RS07300 93388ef4dbb9f0a215c80905895e64de 259 Gene3D G3DSA:3.90.230.10 4 257 4.8E-92 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS07300 93388ef4dbb9f0a215c80905895e64de 259 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 169 187 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APT61_RS07300 93388ef4dbb9f0a215c80905895e64de 259 Hamap MF_01974 Methionine aminopeptidase [map]. 4 252 38.498 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APT61_RS07300 93388ef4dbb9f0a215c80905895e64de 259 PANTHER PTHR10804 3 259 1.4E-115 T 22-04-2016 APT61_RS07300 93388ef4dbb9f0a215c80905895e64de 259 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 251 9.7E-93 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APT61_RS07300 93388ef4dbb9f0a215c80905895e64de 259 SUPERFAMILY SSF55920 4 256 3.79E-87 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS00400 c75be329c7efa6f45feab815542082ba 382 PANTHER PTHR11496 1 382 2.9E-229 T 22-04-2016 APT61_RS00400 c75be329c7efa6f45feab815542082ba 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APT61_RS00400 c75be329c7efa6f45feab815542082ba 382 Gene3D G3DSA:1.20.1090.10 184 381 3.1E-74 T 22-04-2016 APT61_RS00400 c75be329c7efa6f45feab815542082ba 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APT61_RS00400 c75be329c7efa6f45feab815542082ba 382 Gene3D G3DSA:3.40.50.1970 2 183 2.2E-55 T 22-04-2016 APT61_RS00400 c75be329c7efa6f45feab815542082ba 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 374 3.3E-119 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APT61_RS00400 c75be329c7efa6f45feab815542082ba 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 378 3.7E-175 T 22-04-2016 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77|UniPathway: UPA00563 APT61_RS00400 c75be329c7efa6f45feab815542082ba 382 SUPERFAMILY SSF56796 3 380 1.31E-123 T 22-04-2016 APT61_RS00400 c75be329c7efa6f45feab815542082ba 382 PANTHER PTHR11496:SF74 1 382 2.9E-229 T 22-04-2016 APT61_RS08785 56f19ba3540410a7ae773df8122d63e1 187 PANTHER PTHR35529 2 187 1.2E-72 T 22-04-2016 APT61_RS08785 56f19ba3540410a7ae773df8122d63e1 187 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 1 184 25.359 T 22-04-2016 IPR022929 Putative manganese efflux pump MntP APT61_RS08785 56f19ba3540410a7ae773df8122d63e1 187 Pfam PF02659 Putative manganese efflux pump 31 181 6.4E-52 T 22-04-2016 IPR003810 Putative manganese efflux pump APT61_RS07055 0114e6d968b530a3b162d102d53094c7 551 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 31 519 9.3E-238 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 APT61_RS07055 0114e6d968b530a3b162d102d53094c7 551 SUPERFAMILY SSF51905 26 155 1.3E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS07055 0114e6d968b530a3b162d102d53094c7 551 SUPERFAMILY SSF51905 191 359 1.3E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS07055 0114e6d968b530a3b162d102d53094c7 551 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 28 519 54.443 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 APT61_RS07055 0114e6d968b530a3b162d102d53094c7 551 Gene3D G3DSA:3.50.50.60 173 357 3.4E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS07055 0114e6d968b530a3b162d102d53094c7 551 Gene3D G3DSA:3.50.50.60 30 98 3.4E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS07055 0114e6d968b530a3b162d102d53094c7 551 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 32 517 1.2E-210 T 22-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 APT61_RS07055 0114e6d968b530a3b162d102d53094c7 551 PANTHER PTHR13847:SF214 27 546 5.7E-220 T 22-04-2016 APT61_RS07055 0114e6d968b530a3b162d102d53094c7 551 PANTHER PTHR13847 27 546 5.7E-220 T 22-04-2016 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 SUPERFAMILY SSF51621 1 74 1.64E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 SUPERFAMILY SSF51621 156 338 1.64E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 4.6E-152 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 SUPERFAMILY SSF52935 323 472 1.31E-34 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 Gene3D G3DSA:3.20.20.60 169 326 8.1E-116 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 Gene3D G3DSA:3.20.20.60 2 72 8.1E-116 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 SUPERFAMILY SSF50800 70 166 5.58E-29 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 471 1.1E-28 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 PRINTS PR01050 Pyruvate kinase family signature 313 329 7.6E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 PRINTS PR01050 Pyruvate kinase family signature 186 200 7.6E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 PRINTS PR01050 Pyruvate kinase family signature 59 75 7.6E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 PRINTS PR01050 Pyruvate kinase family signature 294 312 7.6E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 PRINTS PR01050 Pyruvate kinase family signature 269 293 7.6E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 PRINTS PR01050 Pyruvate kinase family signature 217 243 7.6E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 PRINTS PR01050 Pyruvate kinase family signature 244 268 7.6E-77 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 1.1E-188 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 PANTHER PTHR11817 1 467 9.2E-255 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 Gene3D G3DSA:3.40.1380.20 327 471 9.5E-46 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS12870 02c1aaa85bcf6b4902e1a6e5ff098835 473 Gene3D G3DSA:2.40.33.10 73 168 7.8E-33 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS13090 9453f42c0c14a705dd1f459ea35bbb4c 463 PANTHER PTHR11958 1 456 9.4E-270 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS13090 9453f42c0c14a705dd1f459ea35bbb4c 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 4.9E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS13090 9453f42c0c14a705dd1f459ea35bbb4c 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 4.9E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS13090 9453f42c0c14a705dd1f459ea35bbb4c 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 4.9E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS13090 9453f42c0c14a705dd1f459ea35bbb4c 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 4.9E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS13090 9453f42c0c14a705dd1f459ea35bbb4c 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 4.9E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS13090 9453f42c0c14a705dd1f459ea35bbb4c 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 4.9E-27 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS13090 9453f42c0c14a705dd1f459ea35bbb4c 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 443 3.6E-102 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS13090 9453f42c0c14a705dd1f459ea35bbb4c 463 Gene3D G3DSA:1.10.3860.10 23 449 1.2E-101 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS13090 9453f42c0c14a705dd1f459ea35bbb4c 463 SUPERFAMILY SSF118215 29 443 3.4E-97 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS13090 9453f42c0c14a705dd1f459ea35bbb4c 463 PANTHER PTHR11958:SF5 1 456 9.4E-270 T 22-04-2016 APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 SMART SM00564 340 381 0.9 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 SMART SM00564 636 683 110.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 SMART SM00564 283 315 190.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 SMART SM00564 711 744 0.52 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 SMART SM00564 221 252 0.028 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 SMART SM00564 410 459 31.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 SMART SM00564 483 514 420.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 405 426 - T 22-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 19 789 0.0 T 22-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 Pfam PF01011 PQQ enzyme repeat 443 469 2.1E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 PANTHER PTHR32303:SF4 579 790 2.7E-164 T 22-04-2016 APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 PANTHER PTHR32303:SF4 131 509 2.7E-164 T 22-04-2016 APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 PANTHER PTHR32303 579 790 2.7E-164 T 22-04-2016 APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 PANTHER PTHR32303 131 509 2.7E-164 T 22-04-2016 APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 Pfam PF13360 PQQ-like domain 666 755 6.7E-5 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 Pfam PF13360 PQQ-like domain 219 378 3.6E-7 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 Gene3D G3DSA:2.140.10.10 571 791 7.4E-154 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 Gene3D G3DSA:2.140.10.10 157 535 7.4E-154 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 SUPERFAMILY SSF50998 166 523 1.57E-147 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APT61_RS10515 56f3d61ccaf016a2f94003e476e194a4 792 SUPERFAMILY SSF50998 560 774 1.57E-147 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APT61_RS21840 38bb5c2a52d11b683ca38973e8132736 136 Pfam PF00576 HIUase/Transthyretin family 27 135 3.1E-36 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APT61_RS21840 38bb5c2a52d11b683ca38973e8132736 136 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 26 136 6.2E-43 T 22-04-2016 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394 APT61_RS21840 38bb5c2a52d11b683ca38973e8132736 136 PANTHER PTHR10395:SF7 25 136 2.1E-36 T 22-04-2016 APT61_RS21840 38bb5c2a52d11b683ca38973e8132736 136 PRINTS PR00189 Transthyretin signature 26 46 7.6E-10 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase APT61_RS21840 38bb5c2a52d11b683ca38973e8132736 136 PRINTS PR00189 Transthyretin signature 85 114 7.6E-10 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase APT61_RS21840 38bb5c2a52d11b683ca38973e8132736 136 PRINTS PR00189 Transthyretin signature 58 83 7.6E-10 T 22-04-2016 IPR000895 Transthyretin/hydroxyisourate hydrolase APT61_RS21840 38bb5c2a52d11b683ca38973e8132736 136 Gene3D G3DSA:2.60.40.180 26 136 2.6E-39 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APT61_RS21840 38bb5c2a52d11b683ca38973e8132736 136 SUPERFAMILY SSF49472 24 136 2.22E-38 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APT61_RS21840 38bb5c2a52d11b683ca38973e8132736 136 SMART SM00095 22 135 0.0013 T 22-04-2016 IPR023416 Transthyretin/hydroxyisourate hydrolase, superfamily APT61_RS21840 38bb5c2a52d11b683ca38973e8132736 136 PANTHER PTHR10395 25 136 2.1E-36 T 22-04-2016 APT61_RS04205 d252c3fded78399d77b305612481c899 577 Pfam PF02272 DHHA1 domain 382 450 4.0E-16 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APT61_RS04205 d252c3fded78399d77b305612481c899 577 Pfam PF01368 DHH family 74 208 5.3E-10 T 22-04-2016 IPR001667 DDH domain APT61_RS04205 d252c3fded78399d77b305612481c899 577 SUPERFAMILY SSF64182 48 465 3.4E-116 T 22-04-2016 APT61_RS04205 d252c3fded78399d77b305612481c899 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 573 5.4E-165 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 APT61_RS04205 d252c3fded78399d77b305612481c899 577 PANTHER PTHR30255 4 576 4.1E-226 T 22-04-2016 APT61_RS04205 d252c3fded78399d77b305612481c899 577 PANTHER PTHR30255:SF2 4 576 4.1E-226 T 22-04-2016 APT61_RS10720 64fbef7a4f25c4c3b54ed3eac381e80d 993 Pfam PF07520 Virulence factor SrfB 1 990 0.0 T 22-04-2016 IPR009216 Virulence factor SrfB APT61_RS10720 64fbef7a4f25c4c3b54ed3eac381e80d 993 PIRSF PIRSF034585 1 993 0.0 T 22-04-2016 IPR009216 Virulence factor SrfB APT61_RS14675 513b358e9ed7f249665c5edf9038c306 425 Gene3D G3DSA:1.20.1250.20 228 420 3.2E-23 T 22-04-2016 APT61_RS14675 513b358e9ed7f249665c5edf9038c306 425 PANTHER PTHR11662 5 420 4.3E-135 T 22-04-2016 APT61_RS14675 513b358e9ed7f249665c5edf9038c306 425 Gene3D G3DSA:1.20.1250.20 9 210 1.0E-44 T 22-04-2016 APT61_RS14675 513b358e9ed7f249665c5edf9038c306 425 Pfam PF07690 Major Facilitator Superfamily 17 380 1.8E-53 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS14675 513b358e9ed7f249665c5edf9038c306 425 PANTHER PTHR11662:SF3 5 420 4.3E-135 T 22-04-2016 APT61_RS14675 513b358e9ed7f249665c5edf9038c306 425 SUPERFAMILY SSF103473 7 420 1.96E-84 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS03785 589cc508a33040c075f8a1a4062857bf 864 Gene3D G3DSA:2.40.128.130 546 864 1.6E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS03785 589cc508a33040c075f8a1a4062857bf 864 SMART SM00869 587 854 1.1E-26 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS03785 589cc508a33040c075f8a1a4062857bf 864 SUPERFAMILY SSF103515 568 864 6.28E-26 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS11930 9148a22210a3c1ef7339c5c7e727e781 182 PANTHER PTHR30055 5 66 5.5E-17 T 22-04-2016 APT61_RS11930 9148a22210a3c1ef7339c5c7e727e781 182 SUPERFAMILY SSF46689 2 59 3.64E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS11930 9148a22210a3c1ef7339c5c7e727e781 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 6 50 1.2E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS11930 9148a22210a3c1ef7339c5c7e727e781 182 ProSitePatterns PS01081 TetR-type HTH domain signature. 17 48 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT61_RS11930 9148a22210a3c1ef7339c5c7e727e781 182 PANTHER PTHR30055:SF10 5 66 5.5E-17 T 22-04-2016 APT61_RS11930 9148a22210a3c1ef7339c5c7e727e781 182 Gene3D G3DSA:1.10.10.60 3 45 8.0E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS11930 9148a22210a3c1ef7339c5c7e727e781 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 5 18 2.0E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS11930 9148a22210a3c1ef7339c5c7e727e781 182 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 49 2.0E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS11930 9148a22210a3c1ef7339c5c7e727e781 182 Gene3D G3DSA:1.10.357.10 46 176 6.9E-7 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 Gene3D G3DSA:3.40.192.10 7 139 3.4E-52 T 22-04-2016 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 9.5E-41 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 PANTHER PTHR10025 1 287 2.8E-179 T 22-04-2016 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 38.04 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 Gene3D G3DSA:3.40.50.720 140 264 3.9E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 4.1E-68 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 8.5E-88 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 8.5E-88 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 8.5E-88 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 8.5E-88 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 8.5E-88 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 8.5E-88 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 8.5E-88 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 SUPERFAMILY SSF53223 3 122 2.78E-41 T 22-04-2016 APT61_RS16950 c89106185e6f93904e1441ff940f4200 288 SUPERFAMILY SSF51735 123 285 2.03E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05080 3b3b11cdb98f6931eab3e92d8b0885c9 559 Pfam PF00384 Molybdopterin oxidoreductase 1 331 1.2E-85 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS05080 3b3b11cdb98f6931eab3e92d8b0885c9 559 Gene3D G3DSA:1.20.5.460 533 558 1.7E-10 T 22-04-2016 APT61_RS05080 3b3b11cdb98f6931eab3e92d8b0885c9 559 SUPERFAMILY SSF53706 2 407 2.88E-143 T 22-04-2016 APT61_RS05080 3b3b11cdb98f6931eab3e92d8b0885c9 559 Gene3D G3DSA:3.40.228.10 15 217 8.0E-79 T 22-04-2016 APT61_RS05080 3b3b11cdb98f6931eab3e92d8b0885c9 559 Gene3D G3DSA:3.40.50.740 1 14 3.7E-48 T 22-04-2016 APT61_RS05080 3b3b11cdb98f6931eab3e92d8b0885c9 559 Gene3D G3DSA:3.40.50.740 222 353 3.7E-48 T 22-04-2016 APT61_RS05080 3b3b11cdb98f6931eab3e92d8b0885c9 559 PANTHER PTHR11615:SF112 1 549 1.5E-186 T 22-04-2016 APT61_RS05080 3b3b11cdb98f6931eab3e92d8b0885c9 559 PANTHER PTHR11615 1 549 1.5E-186 T 22-04-2016 APT61_RS05080 3b3b11cdb98f6931eab3e92d8b0885c9 559 Gene3D G3DSA:2.40.40.20 369 532 1.2E-42 T 22-04-2016 APT61_RS05080 3b3b11cdb98f6931eab3e92d8b0885c9 559 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 459 486 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS05080 3b3b11cdb98f6931eab3e92d8b0885c9 559 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 1 529 8.4E-243 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 APT61_RS05080 3b3b11cdb98f6931eab3e92d8b0885c9 559 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 277 294 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS05080 3b3b11cdb98f6931eab3e92d8b0885c9 559 SUPERFAMILY SSF50692 409 546 2.94E-40 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS05080 3b3b11cdb98f6931eab3e92d8b0885c9 559 Pfam PF01568 Molydopterin dinucleotide binding domain 419 526 5.8E-26 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS04835 83bcfe8189bd7605bebf8f1c73abc93d 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 311 1.1E-125 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APT61_RS04835 83bcfe8189bd7605bebf8f1c73abc93d 321 PANTHER PTHR11911 35 321 6.8E-91 T 22-04-2016 APT61_RS04835 83bcfe8189bd7605bebf8f1c73abc93d 321 PANTHER PTHR11911:SF98 35 321 6.8E-91 T 22-04-2016 APT61_RS04835 83bcfe8189bd7605bebf8f1c73abc93d 321 SUPERFAMILY SSF53697 7 316 4.0E-53 T 22-04-2016 APT61_RS04835 83bcfe8189bd7605bebf8f1c73abc93d 321 Pfam PF00571 CBS domain 199 256 2.6E-4 T 22-04-2016 IPR000644 CBS domain APT61_RS04835 83bcfe8189bd7605bebf8f1c73abc93d 321 Pfam PF00571 CBS domain 266 315 1.0E-4 T 22-04-2016 IPR000644 CBS domain APT61_RS04835 83bcfe8189bd7605bebf8f1c73abc93d 321 Pfam PF01380 SIS domain 39 169 3.3E-31 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APT61_RS04835 83bcfe8189bd7605bebf8f1c73abc93d 321 Gene3D G3DSA:3.40.50.10490 22 192 9.1E-43 T 22-04-2016 APT61_RS04835 83bcfe8189bd7605bebf8f1c73abc93d 321 Gene3D G3DSA:3.10.580.10 193 317 6.2E-31 T 22-04-2016 APT61_RS04835 83bcfe8189bd7605bebf8f1c73abc93d 321 PIRSF PIRSF004692 1 321 2.0E-120 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APT61_RS00555 fabf72fb4e457773e480bb649a6f794b 306 PIRSF PIRSF005355 1 304 6.3E-95 T 22-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 APT61_RS00555 fabf72fb4e457773e480bb649a6f794b 306 Pfam PF01040 UbiA prenyltransferase family 24 270 4.6E-37 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APT61_RS00555 fabf72fb4e457773e480bb649a6f794b 306 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 15 298 2.4E-141 T 22-04-2016 APT61_RS00555 fabf72fb4e457773e480bb649a6f794b 306 PANTHER PTHR13929 3 306 3.1E-98 T 22-04-2016 APT61_RS00555 fabf72fb4e457773e480bb649a6f794b 306 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 6 299 21.075 T 22-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APT61_RS00555 fabf72fb4e457773e480bb649a6f794b 306 PANTHER PTHR13929:SF0 3 306 3.1E-98 T 22-04-2016 APT61_RS14335 0b9e75cf6071bb066a7866080dc7c896 262 PANTHER PTHR30473 1 261 1.0E-214 T 22-04-2016 APT61_RS14335 0b9e75cf6071bb066a7866080dc7c896 262 SUPERFAMILY SSF52540 56 237 3.69E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14335 0b9e75cf6071bb066a7866080dc7c896 262 Gene3D G3DSA:3.40.50.300 56 261 2.6E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14335 0b9e75cf6071bb066a7866080dc7c896 262 PANTHER PTHR30473:SF3 1 261 1.0E-214 T 22-04-2016 APT61_RS14335 0b9e75cf6071bb066a7866080dc7c896 262 Pfam PF02562 PhoH-like protein 57 261 5.1E-76 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Gene3D G3DSA:3.90.1100.10 445 591 1.7E-147 T 22-04-2016 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Gene3D G3DSA:3.90.1100.10 659 713 1.7E-147 T 22-04-2016 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Gene3D G3DSA:3.90.1100.10 20 151 1.7E-147 T 22-04-2016 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Gene3D G3DSA:2.30.150.10 592 656 7.0E-32 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 1.0E-27 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 PANTHER PTHR20856:SF20 5 231 0.0 T 22-04-2016 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 PANTHER PTHR20856:SF20 1034 1128 0.0 T 22-04-2016 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 PANTHER PTHR20856:SF20 340 725 0.0 T 22-04-2016 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 PANTHER PTHR20856:SF20 1182 1342 0.0 T 22-04-2016 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 PANTHER PTHR20856:SF20 743 930 0.0 T 22-04-2016 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 PANTHER PTHR20856 5 231 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 PANTHER PTHR20856 1034 1128 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 PANTHER PTHR20856 340 725 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 PANTHER PTHR20856 1182 1342 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 PANTHER PTHR20856 743 930 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Gene3D G3DSA:2.40.50.150 828 937 2.0E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Gene3D G3DSA:2.40.50.150 1045 1059 2.0E-57 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Gene3D G3DSA:2.40.50.100 715 792 1.1E-30 T 22-04-2016 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 7.5E-58 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.9E-27 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 223 3.1E-7 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 333 454 6.2E-16 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Gene3D G3DSA:2.40.270.10 793 820 5.9E-89 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Gene3D G3DSA:2.40.270.10 1060 1242 5.9E-89 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 3.3E-159 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Gene3D G3DSA:3.90.1110.10 346 444 2.4E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Gene3D G3DSA:3.90.1110.10 153 230 2.4E-65 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 SUPERFAMILY SSF64484 343 939 0.0 T 22-04-2016 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 SUPERFAMILY SSF64484 12 226 0.0 T 22-04-2016 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 22-04-2016 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 2.0E-30 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.323 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS21195 43014ea542ac0704f2de43050a0c7126 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21360 a893bd7ae7a3a0e526861c5ab412123d 70 PIRSF PIRSF002599 1 70 2.0E-25 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APT61_RS21360 a893bd7ae7a3a0e526861c5ab412123d 70 SUPERFAMILY SSF50249 4 69 6.69E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS21360 a893bd7ae7a3a0e526861c5ab412123d 70 Gene3D G3DSA:2.40.50.140 5 68 1.3E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS21360 a893bd7ae7a3a0e526861c5ab412123d 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site APT61_RS21360 a893bd7ae7a3a0e526861c5ab412123d 70 PANTHER PTHR11544 1 70 9.0E-46 T 22-04-2016 APT61_RS21360 a893bd7ae7a3a0e526861c5ab412123d 70 PANTHER PTHR11544:SF65 1 70 9.0E-46 T 22-04-2016 APT61_RS21360 a893bd7ae7a3a0e526861c5ab412123d 70 PRINTS PR00050 Cold shock protein signature 43 61 5.4E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS21360 a893bd7ae7a3a0e526861c5ab412123d 70 PRINTS PR00050 Cold shock protein signature 28 37 5.4E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS21360 a893bd7ae7a3a0e526861c5ab412123d 70 PRINTS PR00050 Cold shock protein signature 7 22 5.4E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS21360 a893bd7ae7a3a0e526861c5ab412123d 70 SMART SM00357 6 70 1.5E-30 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APT61_RS21360 a893bd7ae7a3a0e526861c5ab412123d 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 2.6E-32 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS19520 b729a2f9a650776400d2810dc8214e96 159 PANTHER PTHR34319:SF2 1 159 2.7E-55 T 22-04-2016 APT61_RS19520 b729a2f9a650776400d2810dc8214e96 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 2 156 1.0E-37 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS19520 b729a2f9a650776400d2810dc8214e96 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 142 3.4E-29 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS19520 b729a2f9a650776400d2810dc8214e96 159 SUPERFAMILY SSF141452 3 156 2.48E-37 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS19520 b729a2f9a650776400d2810dc8214e96 159 Gene3D G3DSA:2.30.110.20 3 149 3.2E-25 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS19520 b729a2f9a650776400d2810dc8214e96 159 PANTHER PTHR34319 1 159 2.7E-55 T 22-04-2016 APT61_RS18765 0fe3aab04049a28343fdc7a119de0867 210 SUPERFAMILY SSF48498 108 192 5.4E-12 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS18765 0fe3aab04049a28343fdc7a119de0867 210 SUPERFAMILY SSF46689 19 92 2.18E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS18765 0fe3aab04049a28343fdc7a119de0867 210 Gene3D G3DSA:1.10.357.10 21 203 3.6E-30 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS18765 0fe3aab04049a28343fdc7a119de0867 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 41 1.1E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS18765 0fe3aab04049a28343fdc7a119de0867 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 72 1.1E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS18765 0fe3aab04049a28343fdc7a119de0867 210 PANTHER PTHR30055 10 189 1.5E-23 T 22-04-2016 APT61_RS18765 0fe3aab04049a28343fdc7a119de0867 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 28 73 1.0E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS18765 0fe3aab04049a28343fdc7a119de0867 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 40 71 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT61_RS18765 0fe3aab04049a28343fdc7a119de0867 210 Pfam PF13977 Bacterial transcriptional repressor 97 189 2.9E-8 T 22-04-2016 APT61_RS13905 9d40fce3b1ed9b3d99567891d6e4853e 434 SUPERFAMILY SSF51905 6 342 4.56E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS13905 9d40fce3b1ed9b3d99567891d6e4853e 434 PANTHER PTHR22912 208 350 9.6E-30 T 22-04-2016 APT61_RS13905 9d40fce3b1ed9b3d99567891d6e4853e 434 PANTHER PTHR22912 7 192 9.6E-30 T 22-04-2016 APT61_RS13905 9d40fce3b1ed9b3d99567891d6e4853e 434 Gene3D G3DSA:3.50.50.60 184 353 1.3E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS13905 9d40fce3b1ed9b3d99567891d6e4853e 434 Gene3D G3DSA:3.50.50.60 6 183 3.7E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS13905 9d40fce3b1ed9b3d99567891d6e4853e 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.6E-8 T 22-04-2016 APT61_RS13905 9d40fce3b1ed9b3d99567891d6e4853e 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 1.6E-8 T 22-04-2016 APT61_RS13905 9d40fce3b1ed9b3d99567891d6e4853e 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.6E-8 T 22-04-2016 APT61_RS13905 9d40fce3b1ed9b3d99567891d6e4853e 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 1.9E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS13905 9d40fce3b1ed9b3d99567891d6e4853e 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 7.3E-16 T 22-04-2016 APT61_RS13905 9d40fce3b1ed9b3d99567891d6e4853e 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 7.3E-16 T 22-04-2016 APT61_RS13905 9d40fce3b1ed9b3d99567891d6e4853e 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 7.3E-16 T 22-04-2016 APT61_RS13905 9d40fce3b1ed9b3d99567891d6e4853e 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 7.3E-16 T 22-04-2016 APT61_RS15620 a5dd51a58dd87fcf24b71b43c69105da 366 PANTHER PTHR30386:SF7 29 366 1.3E-91 T 22-04-2016 APT61_RS15620 a5dd51a58dd87fcf24b71b43c69105da 366 SUPERFAMILY SSF111369 178 310 1.7E-18 T 22-04-2016 APT61_RS15620 a5dd51a58dd87fcf24b71b43c69105da 366 Pfam PF13437 HlyD family secretion protein 238 316 7.8E-14 T 22-04-2016 APT61_RS15620 a5dd51a58dd87fcf24b71b43c69105da 366 Pfam PF13533 Biotin-lipoyl like 66 112 8.2E-18 T 22-04-2016 APT61_RS15620 a5dd51a58dd87fcf24b71b43c69105da 366 PANTHER PTHR30386 29 366 1.3E-91 T 22-04-2016 APT61_RS15620 a5dd51a58dd87fcf24b71b43c69105da 366 SUPERFAMILY SSF111369 65 159 8.76E-13 T 22-04-2016 APT61_RS15620 a5dd51a58dd87fcf24b71b43c69105da 366 Gene3D G3DSA:2.40.50.100 235 267 3.5E-22 T 22-04-2016 APT61_RS15620 a5dd51a58dd87fcf24b71b43c69105da 366 Gene3D G3DSA:2.40.50.100 65 98 3.5E-22 T 22-04-2016 APT61_RS18895 c7802d4c40f6b7f58cc7eaf8a6dbcc40 282 PIRSF PIRSF000903 1 274 1.3E-124 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 APT61_RS18895 c7802d4c40f6b7f58cc7eaf8a6dbcc40 282 PANTHER PTHR24032:SF27 1 276 7.5E-178 T 22-04-2016 APT61_RS18895 c7802d4c40f6b7f58cc7eaf8a6dbcc40 282 PANTHER PTHR24032 1 276 7.5E-178 T 22-04-2016 APT61_RS18895 c7802d4c40f6b7f58cc7eaf8a6dbcc40 282 Gene3D G3DSA:3.60.21.10 1 132 1.1E-55 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS18895 c7802d4c40f6b7f58cc7eaf8a6dbcc40 282 Gene3D G3DSA:3.60.21.10 169 267 1.1E-55 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS18895 c7802d4c40f6b7f58cc7eaf8a6dbcc40 282 SUPERFAMILY SSF56300 1 259 1.22E-58 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS18895 c7802d4c40f6b7f58cc7eaf8a6dbcc40 282 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 52.237 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 APT61_RS18895 c7802d4c40f6b7f58cc7eaf8a6dbcc40 282 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 278 1.0E-160 T 22-04-2016 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 APT61_RS18895 c7802d4c40f6b7f58cc7eaf8a6dbcc40 282 Pfam PF00149 Calcineurin-like phosphoesterase 2 130 1.7E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APT61_RS05480 1122192b47d8fb839e60a0e0e2d519f6 333 SUPERFAMILY SSF50129 5 140 8.65E-32 T 22-04-2016 IPR011032 GroES-like APT61_RS05480 1122192b47d8fb839e60a0e0e2d519f6 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 87 1.1E-6 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APT61_RS05480 1122192b47d8fb839e60a0e0e2d519f6 333 Pfam PF13602 Zinc-binding dehydrogenase 191 330 9.5E-22 T 22-04-2016 APT61_RS05480 1122192b47d8fb839e60a0e0e2d519f6 333 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 3 333 7.2E-159 T 22-04-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 APT61_RS05480 1122192b47d8fb839e60a0e0e2d519f6 333 PANTHER PTHR11695 17 331 2.2E-123 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS05480 1122192b47d8fb839e60a0e0e2d519f6 333 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 146 167 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 APT61_RS05480 1122192b47d8fb839e60a0e0e2d519f6 333 SMART SM00829 9 330 7.1E-12 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APT61_RS05480 1122192b47d8fb839e60a0e0e2d519f6 333 SUPERFAMILY SSF51735 114 284 1.81E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05480 1122192b47d8fb839e60a0e0e2d519f6 333 PANTHER PTHR11695:SF558 17 331 2.2E-123 T 22-04-2016 APT61_RS05480 1122192b47d8fb839e60a0e0e2d519f6 333 Gene3D G3DSA:3.90.180.10 1 154 1.5E-35 T 22-04-2016 IPR011032 GroES-like APT61_RS05480 1122192b47d8fb839e60a0e0e2d519f6 333 Gene3D G3DSA:3.40.50.720 155 259 1.8E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS03555 3b949efa7559b03b70314d49a0f7a9f8 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 209 6.3E-84 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APT61_RS03555 3b949efa7559b03b70314d49a0f7a9f8 217 PANTHER PTHR21327 1 215 4.7E-161 T 22-04-2016 APT61_RS03555 3b949efa7559b03b70314d49a0f7a9f8 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 43.035 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APT61_RS03555 3b949efa7559b03b70314d49a0f7a9f8 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 8.3E-83 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APT61_RS03555 3b949efa7559b03b70314d49a0f7a9f8 217 SUPERFAMILY SSF55821 7 213 3.2E-85 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APT61_RS03555 3b949efa7559b03b70314d49a0f7a9f8 217 PANTHER PTHR21327:SF15 1 215 4.7E-161 T 22-04-2016 APT61_RS03555 3b949efa7559b03b70314d49a0f7a9f8 217 Gene3D G3DSA:3.90.870.10 10 214 2.3E-94 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APT61_RS03400 fe0ad8e43f62019af4f35e53805cbae4 171 PANTHER PTHR35861 1 171 9.4E-85 T 22-04-2016 APT61_RS03400 fe0ad8e43f62019af4f35e53805cbae4 171 PANTHER PTHR35861:SF2 1 171 9.4E-85 T 22-04-2016 APT61_RS03400 fe0ad8e43f62019af4f35e53805cbae4 171 Pfam PF04985 Phage tail tube protein FII 4 170 1.4E-59 T 22-04-2016 IPR006498 Tail tube protein APT61_RS03400 fe0ad8e43f62019af4f35e53805cbae4 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 171 4.4E-49 T 22-04-2016 IPR006498 Tail tube protein APT61_RS02570 4e3cb8567e41fce1e690912acd377e47 339 Gene3D G3DSA:3.40.50.720 189 289 3.6E-16 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02570 4e3cb8567e41fce1e690912acd377e47 339 PANTHER PTHR11695 16 335 1.2E-112 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS02570 4e3cb8567e41fce1e690912acd377e47 339 Gene3D G3DSA:3.90.180.10 3 188 3.9E-58 T 22-04-2016 IPR011032 GroES-like APT61_RS02570 4e3cb8567e41fce1e690912acd377e47 339 SUPERFAMILY SSF50129 3 184 1.16E-42 T 22-04-2016 IPR011032 GroES-like APT61_RS02570 4e3cb8567e41fce1e690912acd377e47 339 SMART SM00829 13 335 9.6E-7 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APT61_RS02570 4e3cb8567e41fce1e690912acd377e47 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APT61_RS02570 4e3cb8567e41fce1e690912acd377e47 339 Pfam PF00107 Zinc-binding dehydrogenase 179 299 8.7E-22 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APT61_RS02570 4e3cb8567e41fce1e690912acd377e47 339 SUPERFAMILY SSF51735 142 305 4.85E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02570 4e3cb8567e41fce1e690912acd377e47 339 PANTHER PTHR11695:SF582 16 335 1.2E-112 T 22-04-2016 APT61_RS02570 4e3cb8567e41fce1e690912acd377e47 339 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 172 199 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APT61_RS02570 4e3cb8567e41fce1e690912acd377e47 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 137 2.6E-25 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APT61_RS00435 9e3f40811dc44ff6af9950f891692d94 489 Gene3D G3DSA:3.30.420.40 4 242 1.5E-27 T 22-04-2016 APT61_RS00435 9e3f40811dc44ff6af9950f891692d94 489 Gene3D G3DSA:3.30.420.40 362 479 3.3E-14 T 22-04-2016 APT61_RS00435 9e3f40811dc44ff6af9950f891692d94 489 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 243 1.2E-29 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APT61_RS00435 9e3f40811dc44ff6af9950f891692d94 489 Hamap MF_01535 Rhamnulokinase [rhaB]. 6 483 53.61 T 22-04-2016 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5|UniPathway: UPA00541 APT61_RS00435 9e3f40811dc44ff6af9950f891692d94 489 PANTHER PTHR10196:SF6 1 480 2.0E-235 T 22-04-2016 APT61_RS00435 9e3f40811dc44ff6af9950f891692d94 489 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 253 439 3.2E-26 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APT61_RS00435 9e3f40811dc44ff6af9950f891692d94 489 SUPERFAMILY SSF53067 6 245 1.62E-48 T 22-04-2016 APT61_RS00435 9e3f40811dc44ff6af9950f891692d94 489 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 7 458 4.2E-233 T 22-04-2016 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5|UniPathway: UPA00541 APT61_RS00435 9e3f40811dc44ff6af9950f891692d94 489 PANTHER PTHR10196 1 480 2.0E-235 T 22-04-2016 APT61_RS00435 9e3f40811dc44ff6af9950f891692d94 489 SUPERFAMILY SSF53067 251 478 3.11E-31 T 22-04-2016 APT61_RS04595 236b7c522933597c467e95654fde0b10 446 Gene3D G3DSA:3.20.20.120 124 397 5.2E-104 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS04595 236b7c522933597c467e95654fde0b10 446 SUPERFAMILY SSF51604 138 415 3.03E-82 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS04595 236b7c522933597c467e95654fde0b10 446 SMART SM00922 184 284 2.9E-16 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APT61_RS04595 236b7c522933597c467e95654fde0b10 446 Pfam PF13378 Enolase C-terminal domain-like 188 404 1.5E-38 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS04595 236b7c522933597c467e95654fde0b10 446 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 39 136 1.2E-8 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APT61_RS04595 236b7c522933597c467e95654fde0b10 446 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 111 136 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APT61_RS04595 236b7c522933597c467e95654fde0b10 446 SUPERFAMILY SSF54826 7 136 5.39E-31 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS04595 236b7c522933597c467e95654fde0b10 446 PANTHER PTHR13794:SF47 6 151 6.0E-242 T 22-04-2016 APT61_RS04595 236b7c522933597c467e95654fde0b10 446 PANTHER PTHR13794:SF47 172 430 6.0E-242 T 22-04-2016 APT61_RS04595 236b7c522933597c467e95654fde0b10 446 Gene3D G3DSA:3.30.390.10 9 123 2.1E-16 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS04595 236b7c522933597c467e95654fde0b10 446 PANTHER PTHR13794 6 151 6.0E-242 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APT61_RS04595 236b7c522933597c467e95654fde0b10 446 PANTHER PTHR13794 172 430 6.0E-242 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 SMART SM00448 526 639 2.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 SUPERFAMILY SSF52172 526 651 1.41E-26 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 1.9E-13 T 22-04-2016 IPR000014 PAS domain APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 SUPERFAMILY SSF55874 336 503 8.51E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 SUPERFAMILY SSF55785 142 267 4.36E-20 T 22-04-2016 IPR000014 PAS domain APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 504 4.0E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 Gene3D G3DSA:3.30.565.10 348 506 1.5E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 Pfam PF00989 PAS fold 156 266 2.4E-16 T 22-04-2016 IPR013767 PAS fold GO:0006355 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 PANTHER PTHR24423:SF476 4 95 0.0 T 22-04-2016 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 PANTHER PTHR24423:SF476 153 677 0.0 T 22-04-2016 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 SMART SM00388 282 347 1.2E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 SMART SM00073 675 772 1.9E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 Pfam PF01627 Hpt domain 686 760 2.5E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 PANTHER PTHR24423 4 95 0.0 T 22-04-2016 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 PANTHER PTHR24423 153 677 0.0 T 22-04-2016 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 Gene3D G3DSA:3.40.50.2300 526 650 3.5E-30 T 22-04-2016 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 SUPERFAMILY SSF47384 269 347 5.3E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 Pfam PF00072 Response regulator receiver domain 528 639 5.0E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 Gene3D G3DSA:3.30.450.20 142 267 1.5E-20 T 22-04-2016 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 Gene3D G3DSA:1.10.287.970 1 88 4.8E-41 T 22-04-2016 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 PIRSF PIRSF003182 1 777 0.0 T 22-04-2016 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 SMART SM00387 394 507 3.4E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 1.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 1.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 1.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 1.3E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 Gene3D G3DSA:1.10.287.130 274 343 1.7E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 SMART SM00091 155 221 6.7E-6 T 22-04-2016 IPR000014 PAS domain APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 SUPERFAMILY SSF47226 663 774 1.22E-28 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 346 2.3E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS02605 2133cbbe69fd2566353b74afad61175d 777 Gene3D G3DSA:1.20.120.160 676 774 2.1E-34 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APT61_RS12520 887f72dfafd884e6510311209ea7b768 333 PANTHER PTHR11409 6 332 7.1E-107 T 22-04-2016 APT61_RS12520 887f72dfafd884e6510311209ea7b768 333 Pfam PF00962 Adenosine/AMP deaminase 6 329 7.6E-103 T 22-04-2016 IPR001365 Adenosine/AMP deaminase domain GO:0019239 APT61_RS12520 887f72dfafd884e6510311209ea7b768 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 4.0E-108 T 22-04-2016 IPR006330 Adenosine/adenine deaminase GO:0019239 APT61_RS12520 887f72dfafd884e6510311209ea7b768 333 SUPERFAMILY SSF51556 5 326 2.56E-77 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS12520 887f72dfafd884e6510311209ea7b768 333 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 22-04-2016 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: REACT_1698 APT61_RS12520 887f72dfafd884e6510311209ea7b768 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 53.624 T 22-04-2016 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APT61_RS12520 887f72dfafd884e6510311209ea7b768 333 Gene3D G3DSA:3.20.20.140 6 331 1.7E-97 T 22-04-2016 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 Gene3D G3DSA:1.25.40.10 325 477 2.4E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 Gene3D G3DSA:1.25.40.10 770 859 2.4E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 Pfam PF13469 Sulfotransferase family 508 707 4.4E-40 T 22-04-2016 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 Pfam PF13432 Tetratricopeptide repeat 70 123 0.0027 T 22-04-2016 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 Pfam PF13432 Tetratricopeptide repeat 775 825 3.1E-6 T 22-04-2016 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 Gene3D G3DSA:3.40.50.300 508 742 4.2E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 SUPERFAMILY SSF48452 342 405 5.17E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 SUPERFAMILY SSF48452 215 289 5.17E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 SUPERFAMILY SSF48452 772 857 5.17E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 SUPERFAMILY SSF48452 58 132 5.17E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 SMART SM00028 249 282 36.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 SMART SM00028 99 132 0.38 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 SMART SM00028 65 98 150.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 SMART SM00028 438 471 330.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 SMART SM00028 769 802 21.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 SMART SM00028 369 402 0.0011 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 Gene3D G3DSA:1.25.40.10 38 156 3.5E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 Gene3D G3DSA:1.25.40.10 211 278 1.4E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 Pfam PF14559 Tetratricopeptide repeat 347 405 3.9E-7 T 22-04-2016 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 PANTHER PTHR23083 364 402 1.9E-27 T 22-04-2016 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 PANTHER PTHR23083 211 277 1.9E-27 T 22-04-2016 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 PANTHER PTHR23083 769 856 1.9E-27 T 22-04-2016 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 PANTHER PTHR23083 36 132 1.9E-27 T 22-04-2016 APT61_RS13495 b6dcc0ba0d5405e4a27a6f8b0ad4785a 896 SUPERFAMILY SSF52540 508 744 5.69E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07415 60c3d6cdbb92fbd24d5e2391e3b46e27 369 PANTHER PTHR23264:SF19 7 367 5.5E-194 T 22-04-2016 APT61_RS07415 60c3d6cdbb92fbd24d5e2391e3b46e27 369 SUPERFAMILY SSF52540 108 355 6.13E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07415 60c3d6cdbb92fbd24d5e2391e3b46e27 369 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 350 37.322 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APT61_RS07415 60c3d6cdbb92fbd24d5e2391e3b46e27 369 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 106 349 1.5E-100 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APT61_RS07415 60c3d6cdbb92fbd24d5e2391e3b46e27 369 ProSitePatterns PS01215 Mrp family signature. 213 229 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 APT61_RS07415 60c3d6cdbb92fbd24d5e2391e3b46e27 369 PANTHER PTHR23264 7 367 5.5E-194 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein APT61_RS07415 60c3d6cdbb92fbd24d5e2391e3b46e27 369 Gene3D G3DSA:3.40.50.300 99 349 1.3E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13980 dc4bf6ff83fe40650b51e6dfbc6a6ba6 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 9.3E-38 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APT61_RS13980 dc4bf6ff83fe40650b51e6dfbc6a6ba6 78 PANTHER PTHR20863 4 73 3.5E-30 T 22-04-2016 APT61_RS13980 dc4bf6ff83fe40650b51e6dfbc6a6ba6 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 4.0E-4 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APT61_RS13980 dc4bf6ff83fe40650b51e6dfbc6a6ba6 78 Gene3D G3DSA:1.10.1200.10 3 77 1.5E-35 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS13980 dc4bf6ff83fe40650b51e6dfbc6a6ba6 78 SUPERFAMILY SSF47336 2 77 2.09E-23 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS13980 dc4bf6ff83fe40650b51e6dfbc6a6ba6 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.8E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS13980 dc4bf6ff83fe40650b51e6dfbc6a6ba6 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site APT61_RS13980 dc4bf6ff83fe40650b51e6dfbc6a6ba6 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 21.964 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 PANTHER PTHR32071 6 470 6.7E-258 T 22-04-2016 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 PANTHER PTHR32071:SF15 6 470 6.7E-258 T 22-04-2016 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 SMART SM00448 4 115 4.9E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 Pfam PF02954 Bacterial regulatory protein, Fis family 428 467 1.6E-15 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 SUPERFAMILY SSF52540 139 383 6.55E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 Gene3D G3DSA:1.10.8.60 313 391 3.9E-25 T 22-04-2016 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 Gene3D G3DSA:3.40.50.2300 6 132 2.8E-38 T 22-04-2016 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 Pfam PF00158 Sigma-54 interaction domain 140 306 9.1E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 SMART SM00382 160 311 7.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 SUPERFAMILY SSF52172 6 185 1.99E-46 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 Pfam PF00072 Response regulator receiver domain 6 115 1.7E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 467 2.8E-246 T 22-04-2016 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 SUPERFAMILY SSF46689 380 470 2.19E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 Gene3D G3DSA:1.10.10.60 399 470 9.8E-25 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 470 8.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 433 450 8.0E-11 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APT61_RS00170 439ecfbe364c3086c29d7e8e78063634 470 Gene3D G3DSA:3.40.50.300 138 312 2.7E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS22120 1ebff3e0cbc5acb624fe7f1e46799974 326 PANTHER PTHR30118 1 324 1.0E-199 T 22-04-2016 APT61_RS22120 1ebff3e0cbc5acb624fe7f1e46799974 326 Gene3D G3DSA:1.10.10.10 2 88 9.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS22120 1ebff3e0cbc5acb624fe7f1e46799974 326 PANTHER PTHR30118:SF11 1 324 1.0E-199 T 22-04-2016 APT61_RS22120 1ebff3e0cbc5acb624fe7f1e46799974 326 Pfam PF03466 LysR substrate binding domain 100 313 2.6E-17 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS22120 1ebff3e0cbc5acb624fe7f1e46799974 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 66 4.3E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS22120 1ebff3e0cbc5acb624fe7f1e46799974 326 SUPERFAMILY SSF46785 7 88 1.25E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS22120 1ebff3e0cbc5acb624fe7f1e46799974 326 Gene3D G3DSA:3.40.190.10 98 181 5.0E-15 T 22-04-2016 APT61_RS22120 1ebff3e0cbc5acb624fe7f1e46799974 326 Gene3D G3DSA:3.40.190.10 290 316 5.0E-15 T 22-04-2016 APT61_RS22120 1ebff3e0cbc5acb624fe7f1e46799974 326 Gene3D G3DSA:3.40.190.10 182 279 2.6E-25 T 22-04-2016 APT61_RS22120 1ebff3e0cbc5acb624fe7f1e46799974 326 SUPERFAMILY SSF53850 96 313 4.16E-28 T 22-04-2016 APT61_RS18130 fc3407ccb590ef61d2eaccc36fd4cd37 235 SUPERFAMILY SSF118196 1 229 1.24E-83 T 22-04-2016 IPR023370 TsaA-like domain APT61_RS18130 fc3407ccb590ef61d2eaccc36fd4cd37 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 9.7E-41 T 22-04-2016 IPR023370 TsaA-like domain APT61_RS18130 fc3407ccb590ef61d2eaccc36fd4cd37 235 Gene3D G3DSA:2.40.30.70 4 158 4.8E-52 T 22-04-2016 IPR023370 TsaA-like domain APT61_RS18130 fc3407ccb590ef61d2eaccc36fd4cd37 235 PANTHER PTHR12818 1 235 5.4E-136 T 22-04-2016 APT61_RS18130 fc3407ccb590ef61d2eaccc36fd4cd37 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 149 8.4E-59 T 22-04-2016 IPR023370 TsaA-like domain APT61_RS18130 fc3407ccb590ef61d2eaccc36fd4cd37 235 PANTHER PTHR12818:SF6 1 235 5.4E-136 T 22-04-2016 APT61_RS18130 fc3407ccb590ef61d2eaccc36fd4cd37 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 22-04-2016 IPR023368 Uncharacterised protein family UPF0066, conserved site APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PANTHER PTHR22912 1 461 1.2E-296 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 69.543 T 22-04-2016 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 3.1E-49 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 3.1E-49 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 3.1E-49 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 3.1E-49 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 3.1E-49 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 3.1E-49 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 3.1E-49 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 3.1E-49 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 3.1E-49 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 Gene3D G3DSA:3.50.50.60 5 145 2.5E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 SUPERFAMILY SSF51905 1 322 3.63E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PIRSF PIRSF000350 1 463 8.3E-69 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 SUPERFAMILY SSF55424 345 463 1.51E-30 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 Gene3D G3DSA:3.50.50.60 146 334 8.4E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 1.8E-25 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.8E-25 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 1.8E-25 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.8E-25 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.8E-25 T 22-04-2016 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 2.7E-30 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 Gene3D G3DSA:3.30.390.30 345 460 2.3E-33 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 1.1E-58 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS00695 58aec82d41e09f9e09a80e868b9e2782 466 PANTHER PTHR22912:SF93 1 461 1.2E-296 T 22-04-2016 APT61_RS21895 d9dc37fac5f9a3acc539589e13ddde5b 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 428 440 2.0E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS21895 d9dc37fac5f9a3acc539589e13ddde5b 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 2.0E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS21895 d9dc37fac5f9a3acc539589e13ddde5b 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 404 421 2.0E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS21895 d9dc37fac5f9a3acc539589e13ddde5b 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 383 394 2.0E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS21895 d9dc37fac5f9a3acc539589e13ddde5b 461 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 2.0E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS21895 d9dc37fac5f9a3acc539589e13ddde5b 461 Gene3D G3DSA:3.20.20.80 2 452 1.3E-143 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS21895 d9dc37fac5f9a3acc539589e13ddde5b 461 PANTHER PTHR10353:SF73 1 460 0.0 T 22-04-2016 APT61_RS21895 d9dc37fac5f9a3acc539589e13ddde5b 461 Pfam PF00232 Glycosyl hydrolase family 1 3 457 8.5E-130 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS21895 d9dc37fac5f9a3acc539589e13ddde5b 461 SUPERFAMILY SSF51445 2 452 2.94E-159 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS21895 d9dc37fac5f9a3acc539589e13ddde5b 461 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site APT61_RS21895 d9dc37fac5f9a3acc539589e13ddde5b 461 PANTHER PTHR10353 1 460 0.0 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS09710 ac15e343b73f56192599ea807a6617a5 350 PANTHER PTHR11695 12 54 1.3E-88 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS09710 ac15e343b73f56192599ea807a6617a5 350 PANTHER PTHR11695 78 339 1.3E-88 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS09710 ac15e343b73f56192599ea807a6617a5 350 SUPERFAMILY SSF51735 137 290 1.06E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS09710 ac15e343b73f56192599ea807a6617a5 350 SUPERFAMILY SSF50129 1 167 7.35E-12 T 22-04-2016 IPR011032 GroES-like APT61_RS09710 ac15e343b73f56192599ea807a6617a5 350 Gene3D G3DSA:3.90.180.10 1 93 3.3E-4 T 22-04-2016 IPR011032 GroES-like APT61_RS09710 ac15e343b73f56192599ea807a6617a5 350 Gene3D G3DSA:3.40.50.720 162 268 3.5E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS09710 ac15e343b73f56192599ea807a6617a5 350 Pfam PF00107 Zinc-binding dehydrogenase 168 282 4.3E-26 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APT61_RS09710 ac15e343b73f56192599ea807a6617a5 350 PANTHER PTHR11695:SF559 12 54 1.3E-88 T 22-04-2016 APT61_RS09710 ac15e343b73f56192599ea807a6617a5 350 PANTHER PTHR11695:SF559 78 339 1.3E-88 T 22-04-2016 APT61_RS09710 ac15e343b73f56192599ea807a6617a5 350 Gene3D G3DSA:3.90.180.10 94 161 4.4E-12 T 22-04-2016 IPR011032 GroES-like APT61_RS08600 5328d9639b281a96e57868fa082b1dde 323 PIRSF PIRSF026649 9 314 4.7E-99 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APT61_RS08600 5328d9639b281a96e57868fa082b1dde 323 PANTHER PTHR30606:SF4 9 323 1.3E-198 T 22-04-2016 APT61_RS08600 5328d9639b281a96e57868fa082b1dde 323 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 305 2.6E-102 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APT61_RS08600 5328d9639b281a96e57868fa082b1dde 323 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 4 310 52.31 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 APT61_RS08600 5328d9639b281a96e57868fa082b1dde 323 PANTHER PTHR30606 9 323 1.3E-198 T 22-04-2016 APT61_RS08600 5328d9639b281a96e57868fa082b1dde 323 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 10 314 1.2E-145 T 22-04-2016 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24|UniPathway: UPA00030|UniPathway: UPA00360 APT61_RS14410 d1cc440aa547f9bfa9610bfade823922 163 Gene3D G3DSA:2.30.110.10 2 156 1.6E-53 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS14410 d1cc440aa547f9bfa9610bfade823922 163 SMART SM00903 12 157 4.6E-55 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APT61_RS14410 d1cc440aa547f9bfa9610bfade823922 163 Pfam PF01613 Flavin reductase like domain 13 158 8.4E-31 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APT61_RS14410 d1cc440aa547f9bfa9610bfade823922 163 PANTHER PTHR30466 2 163 3.7E-72 T 22-04-2016 APT61_RS14410 d1cc440aa547f9bfa9610bfade823922 163 TIGRFAM TIGR03615 RutF: pyrimidine utilization flavin reductase protein F 4 158 3.9E-83 T 22-04-2016 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 APT61_RS14410 d1cc440aa547f9bfa9610bfade823922 163 Hamap MF_00833 FMN reductase (NADH) RutF [rutF]. 1 163 42.716 T 22-04-2016 IPR019917 FMN reductase (NADH) RutF GO:0008752|GO:0055114 KEGG: 00740+1.5.1.42|MetaCyc: PWY-7723 APT61_RS14410 d1cc440aa547f9bfa9610bfade823922 163 SUPERFAMILY SSF50475 3 157 2.7E-46 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS14410 d1cc440aa547f9bfa9610bfade823922 163 PANTHER PTHR30466:SF2 2 163 3.7E-72 T 22-04-2016 APT61_RS06935 69cca5000d9a839cd0e6f7216da58373 321 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 318 23.896 T 22-04-2016 IPR010196 o-succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 APT61_RS06935 69cca5000d9a839cd0e6f7216da58373 321 PANTHER PTHR13794 6 310 5.3E-100 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APT61_RS06935 69cca5000d9a839cd0e6f7216da58373 321 Gene3D G3DSA:3.30.390.10 1 127 8.2E-43 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS06935 69cca5000d9a839cd0e6f7216da58373 321 Gene3D G3DSA:3.20.20.120 128 299 1.4E-35 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS06935 69cca5000d9a839cd0e6f7216da58373 321 SUPERFAMILY SSF54826 1 99 2.87E-26 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS06935 69cca5000d9a839cd0e6f7216da58373 321 SMART SM00922 115 210 1.8E-10 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APT61_RS06935 69cca5000d9a839cd0e6f7216da58373 321 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 307 5.0E-119 T 22-04-2016 APT61_RS06935 69cca5000d9a839cd0e6f7216da58373 321 PANTHER PTHR13794:SF8 6 310 5.3E-100 T 22-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 APT61_RS06935 69cca5000d9a839cd0e6f7216da58373 321 Pfam PF13378 Enolase C-terminal domain-like 126 280 1.8E-16 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS06935 69cca5000d9a839cd0e6f7216da58373 321 SUPERFAMILY SSF51604 106 308 1.57E-50 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS07945 267d04247bcab86bee3dc8c4871c82d2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.28E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS07945 267d04247bcab86bee3dc8c4871c82d2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.28E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS07945 267d04247bcab86bee3dc8c4871c82d2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.28E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS07945 267d04247bcab86bee3dc8c4871c82d2 305 Pfam PF03466 LysR substrate binding domain 87 288 1.6E-33 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS07945 267d04247bcab86bee3dc8c4871c82d2 305 Gene3D G3DSA:3.40.190.10 191 246 1.2E-12 T 22-04-2016 APT61_RS07945 267d04247bcab86bee3dc8c4871c82d2 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.3E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS07945 267d04247bcab86bee3dc8c4871c82d2 305 SUPERFAMILY SSF53850 89 294 7.29E-31 T 22-04-2016 APT61_RS07945 267d04247bcab86bee3dc8c4871c82d2 305 PANTHER PTHR30293 1 300 5.0E-133 T 22-04-2016 APT61_RS07945 267d04247bcab86bee3dc8c4871c82d2 305 SUPERFAMILY SSF46785 1 86 4.73E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS07945 267d04247bcab86bee3dc8c4871c82d2 305 PANTHER PTHR30293:SF0 1 300 5.0E-133 T 22-04-2016 APT61_RS07945 267d04247bcab86bee3dc8c4871c82d2 305 Gene3D G3DSA:1.10.10.10 1 85 3.1E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS07945 267d04247bcab86bee3dc8c4871c82d2 305 Gene3D G3DSA:3.40.190.10 89 190 2.5E-19 T 22-04-2016 APT61_RS00335 63744e987f49b4d20c5eccb36b100657 211 Gene3D G3DSA:1.20.950.20 1 209 5.8E-72 T 22-04-2016 APT61_RS00335 63744e987f49b4d20c5eccb36b100657 211 SUPERFAMILY SSF81342 4 206 1.57E-55 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APT61_RS00335 63744e987f49b4d20c5eccb36b100657 211 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 205 4.5E-67 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 APT61_RS00335 63744e987f49b4d20c5eccb36b100657 211 PANTHER PTHR30074 1 208 4.9E-97 T 22-04-2016 APT61_RS00335 63744e987f49b4d20c5eccb36b100657 211 Pfam PF01292 Prokaryotic cytochrome b561 9 184 1.9E-22 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APT61_RS06665 7845d31cf502169482c899bd8dd01867 392 SUPERFAMILY SSF103473 14 391 1.31E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS06665 7845d31cf502169482c899bd8dd01867 392 PANTHER PTHR23517 1 391 6.2E-245 T 22-04-2016 APT61_RS06665 7845d31cf502169482c899bd8dd01867 392 Gene3D G3DSA:1.20.1250.20 218 389 4.5E-21 T 22-04-2016 APT61_RS06665 7845d31cf502169482c899bd8dd01867 392 Gene3D G3DSA:1.20.1250.20 16 200 6.0E-18 T 22-04-2016 APT61_RS06665 7845d31cf502169482c899bd8dd01867 392 Pfam PF07690 Major Facilitator Superfamily 20 245 5.9E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS06665 7845d31cf502169482c899bd8dd01867 392 PANTHER PTHR23517:SF1 1 391 6.2E-245 T 22-04-2016 APT61_RS09315 8d98c23f8669c859eff5f344d5a3448b 298 PANTHER PTHR22911:SF44 1 290 7.1E-59 T 22-04-2016 APT61_RS09315 8d98c23f8669c859eff5f344d5a3448b 298 SUPERFAMILY SSF103481 38 138 2.35E-14 T 22-04-2016 APT61_RS09315 8d98c23f8669c859eff5f344d5a3448b 298 SUPERFAMILY SSF103481 184 282 9.94E-14 T 22-04-2016 APT61_RS09315 8d98c23f8669c859eff5f344d5a3448b 298 PANTHER PTHR22911 1 290 7.1E-59 T 22-04-2016 APT61_RS09315 8d98c23f8669c859eff5f344d5a3448b 298 Pfam PF00892 EamA-like transporter family 7 136 1.7E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS09315 8d98c23f8669c859eff5f344d5a3448b 298 Pfam PF00892 EamA-like transporter family 150 277 2.7E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 PANTHER PTHR24423:SF486 13 495 8.8E-166 T 22-04-2016 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 PANTHER PTHR24423:SF486 634 809 8.8E-166 T 22-04-2016 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 SUPERFAMILY SSF52172 505 627 3.42E-27 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 Gene3D G3DSA:3.40.50.2300 509 628 2.8E-28 T 22-04-2016 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 Gene3D G3DSA:1.10.287.130 261 328 2.8E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 Gene3D G3DSA:3.40.50.2300 648 759 1.4E-38 T 22-04-2016 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 Pfam PF01627 Hpt domain 796 871 5.2E-11 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 Pfam PF12860 PAS fold 9 121 6.1E-12 T 22-04-2016 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 SUPERFAMILY SSF47226 749 872 8.24E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 SUPERFAMILY SSF47384 256 334 1.96E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 SMART SM00448 509 623 4.0E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 SMART SM00448 650 766 3.9E-35 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 Gene3D G3DSA:3.30.450.20 9 113 2.7E-5 T 22-04-2016 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 Pfam PF00072 Response regulator receiver domain 511 623 2.4E-17 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 Pfam PF00072 Response regulator receiver domain 652 766 1.3E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 380 491 1.4E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 Pfam PF00512 His Kinase A (phospho-acceptor) domain 267 332 4.1E-22 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 Pfam PF08447 PAS fold 153 240 6.2E-9 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 Gene3D G3DSA:3.30.450.20 114 255 2.1E-22 T 22-04-2016 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 SUPERFAMILY SSF55874 321 492 1.31E-47 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 Gene3D G3DSA:1.20.120.160 760 883 6.1E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 SMART SM00387 379 492 1.9E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 SMART SM00086 204 247 2.0E-6 T 22-04-2016 IPR001610 PAC motif APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 SUPERFAMILY SSF52172 650 771 1.57E-35 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 PANTHER PTHR24423 13 495 8.8E-166 T 22-04-2016 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 PANTHER PTHR24423 634 809 8.8E-166 T 22-04-2016 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 SUPERFAMILY SSF55785 136 250 6.63E-15 T 22-04-2016 IPR000014 PAS domain APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 431 1.9E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 470 1.9E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 489 1.9E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 445 1.9E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 Gene3D G3DSA:3.30.565.10 333 496 3.0E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS10095 fefd5ef49f013f2bf006980ac6608320 891 SMART SM00388 267 332 2.7E-27 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS11325 1fecd6265faa30d4af09912f2fa7bf90 665 Gene3D G3DSA:2.170.130.10 24 161 4.1E-38 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS11325 1fecd6265faa30d4af09912f2fa7bf90 665 PANTHER PTHR32552 1 665 5.2E-77 T 22-04-2016 APT61_RS11325 1fecd6265faa30d4af09912f2fa7bf90 665 PANTHER PTHR32552:SF15 1 665 5.2E-77 T 22-04-2016 APT61_RS11325 1fecd6265faa30d4af09912f2fa7bf90 665 SUPERFAMILY SSF56935 24 665 1.62E-115 T 22-04-2016 APT61_RS11325 1fecd6265faa30d4af09912f2fa7bf90 665 Pfam PF00593 TonB dependent receptor 406 663 1.2E-36 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS11325 1fecd6265faa30d4af09912f2fa7bf90 665 Gene3D G3DSA:2.40.170.20 162 665 7.5E-85 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS11325 1fecd6265faa30d4af09912f2fa7bf90 665 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 159 5.3E-26 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS18265 60558138588929b7de0aa1969291ee7c 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 9.1E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APT61_RS18265 60558138588929b7de0aa1969291ee7c 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 9.1E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APT61_RS18265 60558138588929b7de0aa1969291ee7c 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 9.1E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APT61_RS18265 60558138588929b7de0aa1969291ee7c 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 9.1E-22 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APT61_RS18265 60558138588929b7de0aa1969291ee7c 264 SUPERFAMILY SSF55920 3 255 2.36E-92 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS18265 60558138588929b7de0aa1969291ee7c 264 Gene3D G3DSA:3.90.230.10 3 259 8.7E-101 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS18265 60558138588929b7de0aa1969291ee7c 264 PANTHER PTHR10804 1 260 2.6E-186 T 22-04-2016 APT61_RS18265 60558138588929b7de0aa1969291ee7c 264 Pfam PF00557 Metallopeptidase family M24 12 242 1.5E-53 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS18265 60558138588929b7de0aa1969291ee7c 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.682 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APT61_RS18265 60558138588929b7de0aa1969291ee7c 264 PANTHER PTHR10804:SF75 1 260 2.6E-186 T 22-04-2016 APT61_RS18265 60558138588929b7de0aa1969291ee7c 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 2.8E-109 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APT61_RS18265 60558138588929b7de0aa1969291ee7c 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 APT61_RS12545 b38cab054191147006510b545bf9060e 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 9.0E-60 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APT61_RS12545 b38cab054191147006510b545bf9060e 193 PANTHER PTHR30335 2 193 3.6E-133 T 22-04-2016 APT61_RS12545 b38cab054191147006510b545bf9060e 193 PANTHER PTHR30335:SF0 2 193 3.6E-133 T 22-04-2016 APT61_RS12545 b38cab054191147006510b545bf9060e 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.311 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 APT61_RS12545 b38cab054191147006510b545bf9060e 193 PIRSF PIRSF006102 1 193 1.2E-59 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APT61_RS12545 b38cab054191147006510b545bf9060e 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 2.1E-91 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 APT61_RS11625 d8d96203f27a6ebf591d13f311e1c443 357 PANTHER PTHR30482 116 357 1.2E-182 T 22-04-2016 APT61_RS11625 d8d96203f27a6ebf591d13f311e1c443 357 PANTHER PTHR30482 1 94 1.2E-182 T 22-04-2016 APT61_RS11625 d8d96203f27a6ebf591d13f311e1c443 357 PANTHER PTHR30482:SF4 116 357 1.2E-182 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC APT61_RS11625 d8d96203f27a6ebf591d13f311e1c443 357 PANTHER PTHR30482:SF4 1 94 1.2E-182 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC APT61_RS11625 d8d96203f27a6ebf591d13f311e1c443 357 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 340 1.2E-43 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS11625 d8d96203f27a6ebf591d13f311e1c443 357 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 42 351 2.4E-129 T 22-04-2016 IPR017778 ABC transporter, urea, permease protein, UrtC APT61_RS08185 ccf26fadd588d237eb505fb1e2c38b14 222 Gene3D G3DSA:1.10.3720.10 11 216 2.5E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS08185 ccf26fadd588d237eb505fb1e2c38b14 222 PANTHER PTHR30614:SF18 5 220 1.4E-123 T 22-04-2016 APT61_RS08185 ccf26fadd588d237eb505fb1e2c38b14 222 PANTHER PTHR30614 5 220 1.4E-123 T 22-04-2016 APT61_RS08185 ccf26fadd588d237eb505fb1e2c38b14 222 SUPERFAMILY SSF161098 13 200 1.44E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS08185 ccf26fadd588d237eb505fb1e2c38b14 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 2.6E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS08185 ccf26fadd588d237eb505fb1e2c38b14 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 4.8E-34 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 Gene3D G3DSA:3.30.1490.20 121 190 6.5E-34 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 Gene3D G3DSA:3.40.50.20 2 95 1.6E-38 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 Gene3D G3DSA:3.90.600.10 330 424 1.4E-34 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 5.5E-84 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 SMART SM01209 103 296 1.7E-142 T 22-04-2016 APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 PANTHER PTHR10520 1 427 8.3E-298 T 22-04-2016 APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 Gene3D G3DSA:3.30.470.20 191 328 1.6E-64 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 44.155 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 6.2E-36 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 SUPERFAMILY SSF56059 104 325 1.77E-70 T 22-04-2016 APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 424 1.7E-187 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 SUPERFAMILY SSF51246 329 425 5.76E-32 T 22-04-2016 IPR011054 Rudiment single hybrid motif APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 1.5E-28 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 SUPERFAMILY SSF52440 1 103 1.41E-37 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS21110 0e6a5e2727b50733dc6a339ef2fcfbb2 430 SMART SM01210 330 424 4.2E-53 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APT61_RS09590 1fb7abd3f07bf1c025d5a963bd329c00 245 PANTHER PTHR32119 2 239 8.7E-127 T 22-04-2016 APT61_RS09590 1fb7abd3f07bf1c025d5a963bd329c00 245 SUPERFAMILY SSF51366 14 241 3.67E-79 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APT61_RS09590 1fb7abd3f07bf1c025d5a963bd329c00 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 22-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS09590 1fb7abd3f07bf1c025d5a963bd329c00 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 17 237 7.0E-56 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS09590 1fb7abd3f07bf1c025d5a963bd329c00 245 Gene3D G3DSA:3.20.20.70 14 240 1.7E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS09590 1fb7abd3f07bf1c025d5a963bd329c00 245 SMART SM00934 16 237 3.5E-98 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS09590 1fb7abd3f07bf1c025d5a963bd329c00 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 237 7.5E-54 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS09590 1fb7abd3f07bf1c025d5a963bd329c00 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 40.09 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS09590 1fb7abd3f07bf1c025d5a963bd329c00 245 PANTHER PTHR32119:SF2 2 239 8.7E-127 T 22-04-2016 APT61_RS07315 1b5db5581cacd099465eef1cd1f33cd1 620 Gene3D G3DSA:3.30.1360.60 1 79 1.5E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS07315 1b5db5581cacd099465eef1cd1f33cd1 620 PANTHER PTHR30175:SF1 1 568 1.5E-234 T 22-04-2016 APT61_RS07315 1b5db5581cacd099465eef1cd1f33cd1 620 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 535 547 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS07315 1b5db5581cacd099465eef1cd1f33cd1 620 SUPERFAMILY SSF51261 466 616 4.71E-51 T 22-04-2016 IPR011055 Duplicated hybrid motif APT61_RS07315 1b5db5581cacd099465eef1cd1f33cd1 620 PANTHER PTHR30175 1 568 1.5E-234 T 22-04-2016 APT61_RS07315 1b5db5581cacd099465eef1cd1f33cd1 620 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 473 593 3.4E-43 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS07315 1b5db5581cacd099465eef1cd1f33cd1 620 Pfam PF00367 phosphotransferase system, EIIB 8 41 6.1E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS07315 1b5db5581cacd099465eef1cd1f33cd1 620 SUPERFAMILY SSF55604 6 79 6.8E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS07315 1b5db5581cacd099465eef1cd1f33cd1 620 Gene3D G3DSA:2.70.70.10 469 617 2.2E-57 T 22-04-2016 APT61_RS07315 1b5db5581cacd099465eef1cd1f33cd1 620 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 616 3.6E-214 T 22-04-2016 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS07315 1b5db5581cacd099465eef1cd1f33cd1 620 Pfam PF02378 Phosphotransferase system, EIIC 109 393 8.2E-29 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS07315 1b5db5581cacd099465eef1cd1f33cd1 620 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS07315 1b5db5581cacd099465eef1cd1f33cd1 620 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 472 597 5.5E-48 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 SUPERFAMILY SSF50156 385 451 2.37E-14 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 PANTHER PTHR22939:SF101 1 454 1.1E-210 T 22-04-2016 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 375 442 1.3E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 SUPERFAMILY SSF50494 40 262 7.26E-63 T 22-04-2016 IPR009003 Peptidase S1, PA clan APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 SUPERFAMILY SSF50156 224 349 3.42E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 452 1.6E-153 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 PRINTS PR00834 HtrA/DegQ protease family signature 220 237 2.7E-57 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 PRINTS PR00834 HtrA/DegQ protease family signature 163 187 2.7E-57 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 PRINTS PR00834 HtrA/DegQ protease family signature 198 215 2.7E-57 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 PRINTS PR00834 HtrA/DegQ protease family signature 306 318 2.7E-57 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 PRINTS PR00834 HtrA/DegQ protease family signature 122 142 2.7E-57 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 PRINTS PR00834 HtrA/DegQ protease family signature 101 113 2.7E-57 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 Pfam PF13365 Trypsin-like peptidase domain 91 227 2.6E-29 T 22-04-2016 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 Gene3D G3DSA:2.40.10.10 155 267 6.1E-44 T 22-04-2016 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 Pfam PF13180 PDZ domain 284 357 8.6E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 SMART SM00228 266 348 1.3E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 SMART SM00228 373 446 2.0E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 Gene3D G3DSA:2.40.10.10 39 153 2.8E-33 T 22-04-2016 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 PANTHER PTHR22939 1 454 1.1E-210 T 22-04-2016 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 Gene3D G3DSA:2.30.42.10 386 451 5.9E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS02490 0c0dcc33929bb5ef8ed66ba8e7a76093 454 Gene3D G3DSA:2.30.42.10 268 363 1.2E-28 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS21575 906692185fb6adf10a980c463fbe481c 515 PANTHER PTHR31637:SF0 1 515 1.8E-292 T 22-04-2016 APT61_RS21575 906692185fb6adf10a980c463fbe481c 515 Gene3D G3DSA:3.40.1450.10 80 312 3.2E-97 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APT61_RS21575 906692185fb6adf10a980c463fbe481c 515 PANTHER PTHR31637 1 515 1.8E-292 T 22-04-2016 APT61_RS21575 906692185fb6adf10a980c463fbe481c 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 512 1.0E-242 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APT61_RS21575 906692185fb6adf10a980c463fbe481c 515 PIRSF PIRSF001492 1 515 2.1E-205 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APT61_RS21575 906692185fb6adf10a980c463fbe481c 515 SUPERFAMILY SSF53649 5 79 5.37E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APT61_RS21575 906692185fb6adf10a980c463fbe481c 515 SUPERFAMILY SSF53649 312 511 5.37E-74 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APT61_RS21575 906692185fb6adf10a980c463fbe481c 515 SUPERFAMILY SSF64158 79 311 3.14E-84 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APT61_RS21575 906692185fb6adf10a980c463fbe481c 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 513 49.699 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APT61_RS21575 906692185fb6adf10a980c463fbe481c 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 86 300 2.5E-82 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APT61_RS21575 906692185fb6adf10a980c463fbe481c 515 Pfam PF01676 Metalloenzyme superfamily 6 501 1.4E-82 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 APT61_RS21575 906692185fb6adf10a980c463fbe481c 515 Gene3D G3DSA:3.40.720.10 5 79 3.0E-89 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APT61_RS21575 906692185fb6adf10a980c463fbe481c 515 Gene3D G3DSA:3.40.720.10 316 511 3.0E-89 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 SMART SM00487 22 218 9.0E-28 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 PANTHER PTHR13710:SF81 13 609 0.0 T 22-04-2016 APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 Pfam PF16124 RecQ zinc-binding 343 404 3.9E-15 T 22-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 SMART SM00341 529 609 3.4E-30 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 8.9E-205 T 22-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 Pfam PF00271 Helicase conserved C-terminal domain 220 331 1.8E-20 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 Gene3D G3DSA:3.40.50.300 206 344 1.4E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 Gene3D G3DSA:1.10.150.80 530 601 2.4E-24 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 SMART SM00956 411 514 1.2E-45 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 Pfam PF09382 RQC domain 406 514 4.9E-34 T 22-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 SMART SM00490 250 331 4.2E-29 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 Pfam PF00570 HRDC domain 533 599 5.3E-25 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 Pfam PF00270 DEAD/DEAH box helicase 28 186 5.0E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 Gene3D G3DSA:3.40.50.300 14 202 2.5E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 SUPERFAMILY SSF47819 530 605 7.41E-26 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 SUPERFAMILY SSF52540 208 455 5.73E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 SUPERFAMILY SSF52540 15 201 5.21E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 PANTHER PTHR13710 13 609 0.0 T 22-04-2016 APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 Gene3D G3DSA:1.10.10.10 345 515 2.1E-58 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01015 1538fda79a884476b748b7a7eb51bbe1 609 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 13 601 5.9E-274 T 22-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 APT61_RS00835 fea155bf988995cdcc85ee5d4d8a9115 421 Pfam PF00270 DEAD/DEAH box helicase 33 206 3.9E-45 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APT61_RS00835 fea155bf988995cdcc85ee5d4d8a9115 421 SUPERFAMILY SSF52540 84 363 7.63E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00835 fea155bf988995cdcc85ee5d4d8a9115 421 SMART SM00490 270 351 1.7E-30 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS00835 fea155bf988995cdcc85ee5d4d8a9115 421 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.753 T 22-04-2016 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 APT61_RS00835 fea155bf988995cdcc85ee5d4d8a9115 421 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APT61_RS00835 fea155bf988995cdcc85ee5d4d8a9115 421 PANTHER PTHR24031:SF173 1 421 1.3E-279 T 22-04-2016 APT61_RS00835 fea155bf988995cdcc85ee5d4d8a9115 421 PANTHER PTHR24031 1 421 1.3E-279 T 22-04-2016 APT61_RS00835 fea155bf988995cdcc85ee5d4d8a9115 421 SMART SM00487 28 234 1.0E-52 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS00835 fea155bf988995cdcc85ee5d4d8a9115 421 Gene3D G3DSA:3.40.50.300 231 389 3.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00835 fea155bf988995cdcc85ee5d4d8a9115 421 Gene3D G3DSA:3.40.50.300 8 230 7.6E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00835 fea155bf988995cdcc85ee5d4d8a9115 421 Pfam PF00271 Helicase conserved C-terminal domain 243 351 3.2E-28 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS05645 d6871aaf93228863178560b830967ac2 386 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 89 1.4E-40 T 22-04-2016 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00121 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 PANTHER PTHR21022:SF0 3 379 5.4E-161 T 22-04-2016 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 Gene3D G3DSA:3.30.70.260 294 378 9.4E-26 T 22-04-2016 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 Gene3D G3DSA:3.40.190.10 194 273 2.8E-28 T 22-04-2016 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 SUPERFAMILY SSF48600 6 93 5.13E-23 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 SUPERFAMILY SSF53850 105 291 2.39E-56 T 22-04-2016 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 PANTHER PTHR21022 3 379 5.4E-161 T 22-04-2016 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 325 332 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 PIRSF PIRSF001500 1 380 5.7E-144 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 Pfam PF00800 Prephenate dehydratase 106 286 2.4E-61 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 Gene3D G3DSA:1.20.59.10 1 105 3.6E-46 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 SMART SM00830 11 91 6.5E-26 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 261 283 - T 22-04-2016 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 Gene3D G3DSA:3.40.190.10 106 193 1.7E-31 T 22-04-2016 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 Pfam PF01817 Chorismate mutase type II 11 89 3.3E-17 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APT61_RS05645 d6871aaf93228863178560b830967ac2 386 SUPERFAMILY SSF55021 280 377 2.86E-22 T 22-04-2016 APT61_RS21040 63b1deb20d1c2b5f15ea35eaff12f182 291 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 104 118 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APT61_RS21040 63b1deb20d1c2b5f15ea35eaff12f182 291 Gene3D G3DSA:3.10.290.10 6 60 6.6E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS21040 63b1deb20d1c2b5f15ea35eaff12f182 291 SMART SM00363 7 63 5.0E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS21040 63b1deb20d1c2b5f15ea35eaff12f182 291 PANTHER PTHR21600:SF24 1 256 3.7E-150 T 22-04-2016 APT61_RS21040 63b1deb20d1c2b5f15ea35eaff12f182 291 Pfam PF00849 RNA pseudouridylate synthase 69 195 1.6E-12 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS21040 63b1deb20d1c2b5f15ea35eaff12f182 291 PANTHER PTHR21600 1 256 3.7E-150 T 22-04-2016 APT61_RS21040 63b1deb20d1c2b5f15ea35eaff12f182 291 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 226 1.3E-53 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APT61_RS21040 63b1deb20d1c2b5f15ea35eaff12f182 291 SUPERFAMILY SSF55174 8 62 2.02E-13 T 22-04-2016 APT61_RS21040 63b1deb20d1c2b5f15ea35eaff12f182 291 SUPERFAMILY SSF55120 69 229 8.39E-38 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS21040 63b1deb20d1c2b5f15ea35eaff12f182 291 Pfam PF01479 S4 domain 8 52 3.8E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS02765 08562c56aac6690df0d9c0485db97228 208 PANTHER PTHR10920 1 208 6.0E-141 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APT61_RS02765 08562c56aac6690df0d9c0485db97228 208 Pfam PF01728 FtsJ-like methyltransferase 31 206 3.4E-57 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APT61_RS02765 08562c56aac6690df0d9c0485db97228 208 SUPERFAMILY SSF53335 31 207 1.48E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS02765 08562c56aac6690df0d9c0485db97228 208 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 4.6E-93 T 22-04-2016 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 APT61_RS02765 08562c56aac6690df0d9c0485db97228 208 Gene3D G3DSA:3.40.50.150 1 208 1.5E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS02765 08562c56aac6690df0d9c0485db97228 208 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 11 207 27.504 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APT61_RS02765 08562c56aac6690df0d9c0485db97228 208 PANTHER PTHR10920:SF20 1 208 6.0E-141 T 22-04-2016 APT61_RS02765 08562c56aac6690df0d9c0485db97228 208 PIRSF PIRSF005461 1 208 9.4E-81 T 22-04-2016 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 APT61_RS17265 096db3493928ef91d6ed6c50f00a85b8 152 SMART SM00344 2 111 1.5E-39 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APT61_RS17265 096db3493928ef91d6ed6c50f00a85b8 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 47 6.9E-16 T 22-04-2016 APT61_RS17265 096db3493928ef91d6ed6c50f00a85b8 152 Pfam PF01037 Lrp/AsnC ligand binding domain 68 142 5.6E-22 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT61_RS17265 096db3493928ef91d6ed6c50f00a85b8 152 PANTHER PTHR30154:SF17 1 152 1.3E-103 T 22-04-2016 APT61_RS17265 096db3493928ef91d6ed6c50f00a85b8 152 Gene3D G3DSA:1.10.10.10 3 54 2.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17265 096db3493928ef91d6ed6c50f00a85b8 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT61_RS17265 096db3493928ef91d6ed6c50f00a85b8 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 7.6E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS17265 096db3493928ef91d6ed6c50f00a85b8 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 7.6E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS17265 096db3493928ef91d6ed6c50f00a85b8 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 7.6E-11 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS17265 096db3493928ef91d6ed6c50f00a85b8 152 SUPERFAMILY SSF46785 1 61 9.36E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17265 096db3493928ef91d6ed6c50f00a85b8 152 PANTHER PTHR30154 1 152 1.3E-103 T 22-04-2016 APT61_RS17265 096db3493928ef91d6ed6c50f00a85b8 152 SUPERFAMILY SSF54909 62 151 4.29E-21 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS17265 096db3493928ef91d6ed6c50f00a85b8 152 Gene3D G3DSA:3.30.70.920 55 139 1.5E-30 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT61_RS18400 98cf71b10947af6d42bcaa37d47e6cf8 126 PANTHER PTHR21012:SF0 2 126 4.1E-67 T 22-04-2016 APT61_RS18400 98cf71b10947af6d42bcaa37d47e6cf8 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 1.0E-61 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APT61_RS18400 98cf71b10947af6d42bcaa37d47e6cf8 126 Pfam PF02261 Aspartate decarboxylase 1 114 5.7E-48 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APT61_RS18400 98cf71b10947af6d42bcaa37d47e6cf8 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 6.1E-66 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APT61_RS18400 98cf71b10947af6d42bcaa37d47e6cf8 126 PIRSF PIRSF006246 1 125 3.8E-52 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APT61_RS18400 98cf71b10947af6d42bcaa37d47e6cf8 126 Gene3D G3DSA:2.40.40.20 1 124 1.2E-55 T 22-04-2016 APT61_RS18400 98cf71b10947af6d42bcaa37d47e6cf8 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 70.44 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APT61_RS18400 98cf71b10947af6d42bcaa37d47e6cf8 126 PANTHER PTHR21012 2 126 4.1E-67 T 22-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 APT61_RS18400 98cf71b10947af6d42bcaa37d47e6cf8 126 SUPERFAMILY SSF50692 1 121 7.54E-48 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS15750 70d825ead232d0bcefb1730b39a7e034 225 Gene3D G3DSA:1.10.10.60 5 53 1.1E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS15750 70d825ead232d0bcefb1730b39a7e034 225 Gene3D G3DSA:1.10.357.10 54 222 4.8E-72 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS15750 70d825ead232d0bcefb1730b39a7e034 225 Pfam PF09209 Domain of unknown function (DUF1956) 98 218 8.1E-37 T 22-04-2016 IPR015292 Transcription regulator YbiH, C-terminal APT61_RS15750 70d825ead232d0bcefb1730b39a7e034 225 PANTHER PTHR30328:SF8 4 220 1.7E-47 T 22-04-2016 APT61_RS15750 70d825ead232d0bcefb1730b39a7e034 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 7.4E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS15750 70d825ead232d0bcefb1730b39a7e034 225 SUPERFAMILY SSF46689 3 83 6.67E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS15750 70d825ead232d0bcefb1730b39a7e034 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.2E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS15750 70d825ead232d0bcefb1730b39a7e034 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.2E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS15750 70d825ead232d0bcefb1730b39a7e034 225 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT61_RS15750 70d825ead232d0bcefb1730b39a7e034 225 SUPERFAMILY SSF48498 90 218 2.18E-36 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS15750 70d825ead232d0bcefb1730b39a7e034 225 PANTHER PTHR30328 4 220 1.7E-47 T 22-04-2016 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 SUPERFAMILY SSF55021 706 764 5.41E-8 T 22-04-2016 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 Pfam PF01842 ACT domain 818 875 1.5E-9 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 SUPERFAMILY SSF81593 207 328 4.16E-9 T 22-04-2016 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 Pfam PF08335 GlnD PII-uridylyltransferase 194 332 1.9E-34 T 22-04-2016 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 50 885 1.3E-298 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 Gene3D G3DSA:3.30.460.10 88 182 2.7E-7 T 22-04-2016 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 SMART SM00471 465 612 1.0E-11 T 22-04-2016 IPR003607 HD/PDEase domain APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 891 343.941 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 PIRSF PIRSF006288 27 890 0.0 T 22-04-2016 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 SUPERFAMILY SSF55021 816 876 9.54E-10 T 22-04-2016 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 Pfam PF01966 HD domain 469 602 1.3E-16 T 22-04-2016 IPR006674 HD domain APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 SUPERFAMILY SSF81301 32 189 5.95E-20 T 22-04-2016 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 SUPERFAMILY SSF109604 458 561 3.92E-15 T 22-04-2016 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 PANTHER PTHR13734:SF45 110 705 5.9E-159 T 22-04-2016 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 PANTHER PTHR13734 110 705 5.9E-159 T 22-04-2016 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 Gene3D G3DSA:1.10.3210.10 439 631 6.2E-29 T 22-04-2016 IPR006674 HD domain APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 Pfam PF01909 Nucleotidyltransferase domain 86 128 2.9E-7 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 APT61_RS18270 e2bb7661c0ad2bd0fdb3959931c9f2c0 891 Gene3D G3DSA:3.30.70.260 817 866 4.4E-8 T 22-04-2016 APT61_RS08890 d07eb1cb18025211e4ecac0551cfe7ea 219 PANTHER PTHR11820 16 212 1.4E-90 T 22-04-2016 APT61_RS08890 d07eb1cb18025211e4ecac0551cfe7ea 219 Gene3D G3DSA:3.90.850.10 14 217 6.3E-82 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APT61_RS08890 d07eb1cb18025211e4ecac0551cfe7ea 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 212 2.5E-54 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APT61_RS08890 d07eb1cb18025211e4ecac0551cfe7ea 219 SUPERFAMILY SSF56529 11 213 6.67E-71 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APT61_RS03725 e6fbf20b3e2126492c6b95ff2cbff537 219 PANTHER PTHR30353:SF10 1 216 7.9E-161 T 22-04-2016 APT61_RS03725 e6fbf20b3e2126492c6b95ff2cbff537 219 PANTHER PTHR30353 1 216 7.9E-161 T 22-04-2016 IPR032818 DedA family APT61_RS03725 e6fbf20b3e2126492c6b95ff2cbff537 219 Pfam PF09335 SNARE associated Golgi protein 48 173 2.6E-19 T 22-04-2016 IPR032816 SNARE associated Golgi protein APT61_RS20325 0bc72058d5ebc9bd55c9330fddcd5af6 333 TIGRFAM TIGR01932 hflC: HflC protein 1 327 6.9E-146 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 APT61_RS20325 0bc72058d5ebc9bd55c9330fddcd5af6 333 PANTHER PTHR10264 4 156 2.2E-118 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APT61_RS20325 0bc72058d5ebc9bd55c9330fddcd5af6 333 PANTHER PTHR10264 196 329 2.2E-118 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APT61_RS20325 0bc72058d5ebc9bd55c9330fddcd5af6 333 PANTHER PTHR10264:SF80 4 156 2.2E-118 T 22-04-2016 APT61_RS20325 0bc72058d5ebc9bd55c9330fddcd5af6 333 PANTHER PTHR10264:SF80 196 329 2.2E-118 T 22-04-2016 APT61_RS20325 0bc72058d5ebc9bd55c9330fddcd5af6 333 SMART SM00244 18 227 5.4E-42 T 22-04-2016 IPR001107 Band 7 domain APT61_RS20325 0bc72058d5ebc9bd55c9330fddcd5af6 333 SUPERFAMILY SSF117892 56 157 3.27E-16 T 22-04-2016 IPR001107 Band 7 domain APT61_RS20325 0bc72058d5ebc9bd55c9330fddcd5af6 333 SUPERFAMILY SSF117892 196 233 1.2E-7 T 22-04-2016 IPR001107 Band 7 domain APT61_RS20325 0bc72058d5ebc9bd55c9330fddcd5af6 333 PIRSF PIRSF005651 1 333 6.6E-108 T 22-04-2016 IPR010200 HflC GO:0016021|GO:0052547 APT61_RS20325 0bc72058d5ebc9bd55c9330fddcd5af6 333 Pfam PF01145 SPFH domain / Band 7 family 22 243 5.1E-34 T 22-04-2016 IPR001107 Band 7 domain APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 Gene3D G3DSA:2.60.40.10 12 165 4.6E-53 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 PANTHER PTHR10357 1 587 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 PANTHER PTHR10357 606 690 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 PANTHER PTHR10357:SF74 1 587 0.0 T 22-04-2016 APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 PANTHER PTHR10357:SF74 606 690 0.0 T 22-04-2016 APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 12 689 0.0 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 Pfam PF00128 Alpha amylase, catalytic domain 194 285 2.2E-10 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 Gene3D G3DSA:2.60.40.1180 591 690 2.1E-12 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 SMART SM00642 170 576 3.4E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 SUPERFAMILY SSF51011 592 689 9.35E-11 T 22-04-2016 APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 16 104 6.2E-19 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 Gene3D G3DSA:3.20.20.80 166 585 1.0E-117 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 SUPERFAMILY SSF81296 12 155 8.68E-47 T 22-04-2016 IPR014756 Immunoglobulin E-set APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 SUPERFAMILY SSF51445 145 478 2.93E-129 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS11255 fd9adc1444a591dc55d29af177d69b1d 691 SUPERFAMILY SSF51445 507 584 2.93E-129 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS02435 9153284dbe49ef51dd9451278c156bbb 481 PANTHER PTHR30624 12 481 3.1E-260 T 22-04-2016 APT61_RS02435 9153284dbe49ef51dd9451278c156bbb 481 Pfam PF01523 Putative modulator of DNA gyrase 36 332 8.6E-64 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS02435 9153284dbe49ef51dd9451278c156bbb 481 PANTHER PTHR30624:SF4 12 481 3.1E-260 T 22-04-2016 APT61_RS02435 9153284dbe49ef51dd9451278c156bbb 481 SUPERFAMILY SSF111283 23 480 6.02E-131 T 22-04-2016 APT61_RS02435 9153284dbe49ef51dd9451278c156bbb 481 PIRSF PIRSF004919 14 481 3.9E-152 T 22-04-2016 IPR025502 TldD KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS00215 dd1104e0ef0d4ff83c7334cd141b3cd5 291 PANTHER PTHR39340:SF1 1 291 3.8E-127 T 22-04-2016 APT61_RS00215 dd1104e0ef0d4ff83c7334cd141b3cd5 291 SUPERFAMILY SSF51569 3 288 2.93E-63 T 22-04-2016 APT61_RS00215 dd1104e0ef0d4ff83c7334cd141b3cd5 291 PANTHER PTHR39340 1 291 3.8E-127 T 22-04-2016 APT61_RS00215 dd1104e0ef0d4ff83c7334cd141b3cd5 291 PIRSF PIRSF037840 1 291 5.4E-131 T 22-04-2016 IPR017291 Sulfofructosephosphate aldolase, YihT GO:0061595|GO:1902777 MetaCyc: PWY-7446 APT61_RS00215 dd1104e0ef0d4ff83c7334cd141b3cd5 291 Gene3D G3DSA:3.20.20.70 4 288 1.2E-96 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS00215 dd1104e0ef0d4ff83c7334cd141b3cd5 291 Hamap MF_01912 Sulfofructosephosphate aldolase. 1 291 61.837 T 22-04-2016 IPR017291 Sulfofructosephosphate aldolase, YihT GO:0061595|GO:1902777 MetaCyc: PWY-7446 APT61_RS00215 dd1104e0ef0d4ff83c7334cd141b3cd5 291 Pfam PF01791 DeoC/LacD family aldolase 17 257 2.9E-57 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APT61_RS00215 dd1104e0ef0d4ff83c7334cd141b3cd5 291 SMART SM01133 16 258 2.5E-13 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APT61_RS17150 4016fa46b83cf299643ea4488dd23681 1115 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 956 990 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 APT61_RS17150 4016fa46b83cf299643ea4488dd23681 1115 Pfam PF00924 Mechanosensitive ion channel 884 1083 1.5E-59 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APT61_RS17150 4016fa46b83cf299643ea4488dd23681 1115 Gene3D G3DSA:2.30.30.60 942 991 1.7E-17 T 22-04-2016 APT61_RS17150 4016fa46b83cf299643ea4488dd23681 1115 SUPERFAMILY SSF50182 927 992 1.01E-16 T 22-04-2016 IPR010920 LSM domain APT61_RS17150 4016fa46b83cf299643ea4488dd23681 1115 Gene3D G3DSA:3.30.70.100 997 1081 5.2E-22 T 22-04-2016 APT61_RS17150 4016fa46b83cf299643ea4488dd23681 1115 PANTHER PTHR30347 7 1115 0.0 T 22-04-2016 APT61_RS17150 4016fa46b83cf299643ea4488dd23681 1115 SUPERFAMILY SSF82861 842 925 2.88E-8 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APT61_RS17150 4016fa46b83cf299643ea4488dd23681 1115 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 506 823 7.6E-97 T 22-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 APT61_RS17150 4016fa46b83cf299643ea4488dd23681 1115 PANTHER PTHR30347:SF2 7 1115 0.0 T 22-04-2016 APT61_RS17150 4016fa46b83cf299643ea4488dd23681 1115 Pfam PF12795 Mechanosensitive ion channel porin domain 47 286 9.4E-62 T 22-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain APT61_RS17150 4016fa46b83cf299643ea4488dd23681 1115 SUPERFAMILY SSF82689 994 1094 3.27E-26 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APT61_RS09390 e293053cd01864afd9b72dbe34da5936 894 SUPERFAMILY SSF53720 6 453 6.15E-84 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS09390 e293053cd01864afd9b72dbe34da5936 894 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 3.6E-113 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APT61_RS09390 e293053cd01864afd9b72dbe34da5936 894 PIRSF PIRSF000111 1 866 0.0 T 22-04-2016 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00360+1.2.1.10|KEGG: 00362+1.2.1.10|KEGG: 00592+1.1.1.1|KEGG: 00620+1.2.1.10|KEGG: 00621+1.2.1.10|KEGG: 00622+1.2.1.10|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00650+1.2.1.10|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5162|MetaCyc: PWY-5436|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7085|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7180|MetaCyc: PWY-7396 APT61_RS09390 e293053cd01864afd9b72dbe34da5936 894 Gene3D G3DSA:3.40.309.10 309 404 1.2E-28 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS09390 e293053cd01864afd9b72dbe34da5936 894 Gene3D G3DSA:3.40.309.10 226 273 1.2E-28 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS09390 e293053cd01864afd9b72dbe34da5936 894 SUPERFAMILY SSF56796 449 868 5.76E-118 T 22-04-2016 APT61_RS09390 e293053cd01864afd9b72dbe34da5936 894 PANTHER PTHR11496:SF79 360 867 0.0 T 22-04-2016 APT61_RS09390 e293053cd01864afd9b72dbe34da5936 894 Gene3D G3DSA:3.40.605.10 4 225 1.5E-25 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS09390 e293053cd01864afd9b72dbe34da5936 894 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APT61_RS09390 e293053cd01864afd9b72dbe34da5936 894 Gene3D G3DSA:1.20.1090.10 644 864 1.4E-67 T 22-04-2016 APT61_RS09390 e293053cd01864afd9b72dbe34da5936 894 Pfam PF00171 Aldehyde dehydrogenase family 5 269 3.4E-27 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS09390 e293053cd01864afd9b72dbe34da5936 894 Gene3D G3DSA:3.40.50.1970 450 643 6.8E-63 T 22-04-2016 APT61_RS09390 e293053cd01864afd9b72dbe34da5936 894 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APT61_RS09390 e293053cd01864afd9b72dbe34da5936 894 PANTHER PTHR11496 360 867 0.0 T 22-04-2016 APT61_RS09930 07161385224c462fefca8356188de48b 327 Hamap MF_01565 Zinc transport protein ZntB [zntB]. 1 327 70.645 T 22-04-2016 IPR023714 Zinc transport protein ZntB GO:0005385|GO:0005886|GO:0071577 APT61_RS09930 07161385224c462fefca8356188de48b 327 SUPERFAMILY SSF143865 8 255 1.7E-48 T 22-04-2016 APT61_RS09930 07161385224c462fefca8356188de48b 327 Gene3D G3DSA:1.20.58.340 146 244 4.4E-15 T 22-04-2016 APT61_RS09930 07161385224c462fefca8356188de48b 327 Gene3D G3DSA:1.20.58.340 251 327 2.7E-17 T 22-04-2016 APT61_RS09930 07161385224c462fefca8356188de48b 327 SUPERFAMILY SSF144083 264 324 1.57E-12 T 22-04-2016 APT61_RS09930 07161385224c462fefca8356188de48b 327 Pfam PF01544 CorA-like Mg2+ transporter protein 39 323 5.9E-60 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 APT61_RS09930 07161385224c462fefca8356188de48b 327 PANTHER PTHR21535 27 327 2.2E-45 T 22-04-2016 APT61_RS04510 09a1a80957e589df664b86fca702ad55 146 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 143 1.4E-63 T 22-04-2016 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE APT61_RS04510 09a1a80957e589df664b86fca702ad55 146 Pfam PF02657 Fe-S metabolism associated domain 22 138 1.8E-36 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 APT61_RS04510 09a1a80957e589df664b86fca702ad55 146 Gene3D G3DSA:3.90.1010.10 6 145 3.4E-45 T 22-04-2016 APT61_RS04510 09a1a80957e589df664b86fca702ad55 146 SUPERFAMILY SSF82649 4 145 1.73E-40 T 22-04-2016 APT61_RS04510 09a1a80957e589df664b86fca702ad55 146 PANTHER PTHR12735 1 145 3.7E-46 T 22-04-2016 APT61_RS04510 09a1a80957e589df664b86fca702ad55 146 PANTHER PTHR12735:SF11 1 145 3.7E-46 T 22-04-2016 APT61_RS02200 cfb2f9c1a33ea034d995e84e610feaea 138 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 8.9E-59 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APT61_RS02200 cfb2f9c1a33ea034d995e84e610feaea 138 Gene3D G3DSA:1.20.5.220 121 135 1.7E-4 T 22-04-2016 IPR029027 Single alpha-helix domain APT61_RS02200 cfb2f9c1a33ea034d995e84e610feaea 138 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 134 31.135 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APT61_RS02200 cfb2f9c1a33ea034d995e84e610feaea 138 PANTHER PTHR30266:SF2 1 137 7.7E-61 T 22-04-2016 APT61_RS02200 cfb2f9c1a33ea034d995e84e610feaea 138 PANTHER PTHR30266 1 137 7.7E-61 T 22-04-2016 APT61_RS02200 cfb2f9c1a33ea034d995e84e610feaea 138 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 131 2.7E-46 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APT61_RS02200 cfb2f9c1a33ea034d995e84e610feaea 138 SUPERFAMILY SSF81330 12 127 2.62E-36 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APT61_RS02200 cfb2f9c1a33ea034d995e84e610feaea 138 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 2.6E-14 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APT61_RS02200 cfb2f9c1a33ea034d995e84e610feaea 138 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 2.6E-14 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APT61_RS02200 cfb2f9c1a33ea034d995e84e610feaea 138 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 2.6E-14 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 APT61_RS02200 cfb2f9c1a33ea034d995e84e610feaea 138 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site APT61_RS06380 44abcd21fb2a685ba7a99ca34330c411 311 Pfam PF03466 LysR substrate binding domain 89 291 5.1E-44 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS06380 44abcd21fb2a685ba7a99ca34330c411 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.1E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS06380 44abcd21fb2a685ba7a99ca34330c411 311 Gene3D G3DSA:3.40.190.10 178 262 3.9E-19 T 22-04-2016 APT61_RS06380 44abcd21fb2a685ba7a99ca34330c411 311 SUPERFAMILY SSF53850 89 296 2.33E-41 T 22-04-2016 APT61_RS06380 44abcd21fb2a685ba7a99ca34330c411 311 SUPERFAMILY SSF46785 3 112 2.26E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS06380 44abcd21fb2a685ba7a99ca34330c411 311 Gene3D G3DSA:3.40.190.10 92 177 1.2E-16 T 22-04-2016 APT61_RS06380 44abcd21fb2a685ba7a99ca34330c411 311 PANTHER PTHR30419 1 310 1.4E-124 T 22-04-2016 APT61_RS06380 44abcd21fb2a685ba7a99ca34330c411 311 Gene3D G3DSA:1.10.10.10 2 83 6.9E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS06380 44abcd21fb2a685ba7a99ca34330c411 311 PANTHER PTHR30419:SF3 1 310 1.4E-124 T 22-04-2016 APT61_RS06380 44abcd21fb2a685ba7a99ca34330c411 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS06380 44abcd21fb2a685ba7a99ca34330c411 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS06380 44abcd21fb2a685ba7a99ca34330c411 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS07380 464d00da74c914a5744201d022e896d6 316 Gene3D G3DSA:3.40.50.300 1 228 3.1E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07380 464d00da74c914a5744201d022e896d6 316 Gene3D G3DSA:3.10.580.10 229 306 5.8E-6 T 22-04-2016 APT61_RS07380 464d00da74c914a5744201d022e896d6 316 PANTHER PTHR24220:SF434 3 241 6.4E-164 T 22-04-2016 APT61_RS07380 464d00da74c914a5744201d022e896d6 316 PANTHER PTHR24220:SF434 261 315 6.4E-164 T 22-04-2016 APT61_RS07380 464d00da74c914a5744201d022e896d6 316 PANTHER PTHR24220 3 241 6.4E-164 T 22-04-2016 APT61_RS07380 464d00da74c914a5744201d022e896d6 316 PANTHER PTHR24220 261 315 6.4E-164 T 22-04-2016 APT61_RS07380 464d00da74c914a5744201d022e896d6 316 SMART SM00382 26 212 1.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS07380 464d00da74c914a5744201d022e896d6 316 SUPERFAMILY SSF52540 1 239 1.3E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07380 464d00da74c914a5744201d022e896d6 316 Pfam PF00005 ABC transporter 18 162 6.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS07380 464d00da74c914a5744201d022e896d6 316 SUPERFAMILY SSF54631 245 308 1.31E-7 T 22-04-2016 APT61_RS07380 464d00da74c914a5744201d022e896d6 316 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS17710 b8adca6c3d62756a8522f62f6bd2395c 398 Gene3D G3DSA:1.20.1250.20 214 389 4.8E-8 T 22-04-2016 APT61_RS17710 b8adca6c3d62756a8522f62f6bd2395c 398 Gene3D G3DSA:1.20.1250.20 22 201 8.5E-24 T 22-04-2016 APT61_RS17710 b8adca6c3d62756a8522f62f6bd2395c 398 PANTHER PTHR23501 18 392 8.5E-125 T 22-04-2016 APT61_RS17710 b8adca6c3d62756a8522f62f6bd2395c 398 Pfam PF07690 Major Facilitator Superfamily 27 337 5.2E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS17710 b8adca6c3d62756a8522f62f6bd2395c 398 PANTHER PTHR23501:SF28 18 392 8.5E-125 T 22-04-2016 APT61_RS17710 b8adca6c3d62756a8522f62f6bd2395c 398 SUPERFAMILY SSF103473 17 393 1.31E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS05440 f9602c9cf97af4f95007bb956cc769fe 261 SMART SM00895 121 245 1.1E-16 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS05440 f9602c9cf97af4f95007bb956cc769fe 261 Gene3D G3DSA:1.10.10.10 27 101 1.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05440 f9602c9cf97af4f95007bb956cc769fe 261 Hamap MF_01236 Transcriptional regulator NanR [nanR]. 2 261 55.4 T 22-04-2016 IPR023730 Transcriptional regulator NanR APT61_RS05440 f9602c9cf97af4f95007bb956cc769fe 261 SMART SM00345 34 93 9.9E-23 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS05440 f9602c9cf97af4f95007bb956cc769fe 261 Gene3D G3DSA:1.20.120.530 122 251 1.1E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS05440 f9602c9cf97af4f95007bb956cc769fe 261 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 67 5.5E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS05440 f9602c9cf97af4f95007bb956cc769fe 261 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 67 83 5.5E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS05440 f9602c9cf97af4f95007bb956cc769fe 261 PANTHER PTHR11751 216 238 2.4E-14 T 22-04-2016 APT61_RS05440 f9602c9cf97af4f95007bb956cc769fe 261 PANTHER PTHR11751 31 96 2.4E-14 T 22-04-2016 APT61_RS05440 f9602c9cf97af4f95007bb956cc769fe 261 SUPERFAMILY SSF48008 118 250 1.31E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS05440 f9602c9cf97af4f95007bb956cc769fe 261 Pfam PF00392 Bacterial regulatory proteins, gntR family 30 92 4.7E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS05440 f9602c9cf97af4f95007bb956cc769fe 261 SUPERFAMILY SSF46785 26 97 2.14E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05440 f9602c9cf97af4f95007bb956cc769fe 261 Pfam PF07729 FCD domain 123 244 3.7E-19 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS09150 464f6e0b26de79c71c1407fe8f38428d 194 Gene3D G3DSA:3.40.50.1470 3 192 1.7E-71 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APT61_RS09150 464f6e0b26de79c71c1407fe8f38428d 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 16 29 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APT61_RS09150 464f6e0b26de79c71c1407fe8f38428d 194 PANTHER PTHR17224 2 194 5.9E-85 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APT61_RS09150 464f6e0b26de79c71c1407fe8f38428d 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 182 36.32 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APT61_RS09150 464f6e0b26de79c71c1407fe8f38428d 194 Pfam PF01195 Peptidyl-tRNA hydrolase 5 187 1.2E-53 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APT61_RS09150 464f6e0b26de79c71c1407fe8f38428d 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 189 4.9E-72 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APT61_RS09150 464f6e0b26de79c71c1407fe8f38428d 194 PANTHER PTHR17224:SF1 2 194 5.9E-85 T 22-04-2016 APT61_RS09150 464f6e0b26de79c71c1407fe8f38428d 194 SUPERFAMILY SSF53178 3 192 2.35E-70 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 APT61_RS09150 464f6e0b26de79c71c1407fe8f38428d 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 APT61_RS01485 d048771974b61fb58937197e5eabec88 511 PANTHER PTHR11564 203 511 4.2E-156 T 22-04-2016 APT61_RS01485 d048771974b61fb58937197e5eabec88 511 Pfam PF02881 SRP54-type protein, helical bundle domain 224 289 2.2E-13 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APT61_RS01485 d048771974b61fb58937197e5eabec88 511 Pfam PF00448 SRP54-type protein, GTPase domain 307 507 1.5E-78 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APT61_RS01485 d048771974b61fb58937197e5eabec88 511 Gene3D G3DSA:3.40.50.300 301 507 9.9E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01485 d048771974b61fb58937197e5eabec88 511 SUPERFAMILY SSF47364 208 287 3.14E-22 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APT61_RS01485 d048771974b61fb58937197e5eabec88 511 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 481 494 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APT61_RS01485 d048771974b61fb58937197e5eabec88 511 SMART SM00962 307 508 9.3E-124 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APT61_RS01485 d048771974b61fb58937197e5eabec88 511 SUPERFAMILY SSF52540 299 507 1.4E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01485 d048771974b61fb58937197e5eabec88 511 SMART SM00382 306 497 8.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS01485 d048771974b61fb58937197e5eabec88 511 PANTHER PTHR11564:SF16 203 511 4.2E-156 T 22-04-2016 APT61_RS01485 d048771974b61fb58937197e5eabec88 511 SMART SM00963 213 293 6.5E-24 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APT61_RS01485 d048771974b61fb58937197e5eabec88 511 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 236 507 1.1E-115 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APT61_RS01485 d048771974b61fb58937197e5eabec88 511 Gene3D G3DSA:1.20.120.140 199 289 1.1E-35 T 22-04-2016 APT61_RS01485 d048771974b61fb58937197e5eabec88 511 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 236 508 65.226 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 APT61_RS05150 34007ed40474bd6f3beb4af4b679f10b 513 PANTHER PTHR11117 33 511 6.8E-193 T 22-04-2016 APT61_RS05150 34007ed40474bd6f3beb4af4b679f10b 513 SUPERFAMILY SSF52210 165 287 2.35E-19 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS05150 34007ed40474bd6f3beb4af4b679f10b 513 PANTHER PTHR11117:SF10 33 511 6.8E-193 T 22-04-2016 APT61_RS05150 34007ed40474bd6f3beb4af4b679f10b 513 Pfam PF00549 CoA-ligase 344 501 9.6E-46 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS05150 34007ed40474bd6f3beb4af4b679f10b 513 SUPERFAMILY SSF52210 347 507 1.19E-7 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS05150 34007ed40474bd6f3beb4af4b679f10b 513 Pfam PF02629 CoA binding domain 187 280 7.6E-14 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APT61_RS05150 34007ed40474bd6f3beb4af4b679f10b 513 Gene3D G3DSA:3.40.50.720 99 163 7.5E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05150 34007ed40474bd6f3beb4af4b679f10b 513 Gene3D G3DSA:3.40.50.261 164 292 2.3E-24 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS13915 b2a4935034b5d9b1f85dc4958c54a462 341 SUPERFAMILY SSF51445 3 315 6.53E-87 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS13915 b2a4935034b5d9b1f85dc4958c54a462 341 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 7 302 5.7E-98 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APT61_RS13915 b2a4935034b5d9b1f85dc4958c54a462 341 PANTHER PTHR30480:SF7 4 321 4.9E-141 T 22-04-2016 APT61_RS13915 b2a4935034b5d9b1f85dc4958c54a462 341 Gene3D G3DSA:3.20.20.300 3 319 6.6E-96 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APT61_RS13915 b2a4935034b5d9b1f85dc4958c54a462 341 PANTHER PTHR30480 4 321 4.9E-141 T 22-04-2016 APT61_RS13915 b2a4935034b5d9b1f85dc4958c54a462 341 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 48.165 T 22-04-2016 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|UniPathway: UPA00544 APT61_RS13915 b2a4935034b5d9b1f85dc4958c54a462 341 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 APT61_RS16050 4c773a02e883e23519429655e8c909a3 134 SUPERFAMILY SSF54637 4 133 1.76E-38 T 22-04-2016 IPR029069 HotDog domain APT61_RS16050 4c773a02e883e23519429655e8c909a3 134 Pfam PF03061 Thioesterase superfamily 20 103 4.0E-18 T 22-04-2016 IPR006683 Thioesterase domain APT61_RS16050 4c773a02e883e23519429655e8c909a3 134 PANTHER PTHR31793 6 134 1.3E-50 T 22-04-2016 APT61_RS16050 4c773a02e883e23519429655e8c909a3 134 PIRSF PIRSF003230 1 134 1.5E-48 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APT61_RS16050 4c773a02e883e23519429655e8c909a3 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 1.5E-48 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APT61_RS16050 4c773a02e883e23519429655e8c909a3 134 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 22-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 APT61_RS16050 4c773a02e883e23519429655e8c909a3 134 PANTHER PTHR31793:SF9 6 134 1.3E-50 T 22-04-2016 APT61_RS16050 4c773a02e883e23519429655e8c909a3 134 Gene3D G3DSA:3.10.129.10 4 133 3.3E-47 T 22-04-2016 IPR029069 HotDog domain APT61_RS16050 4c773a02e883e23519429655e8c909a3 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 1.1E-50 T 22-04-2016 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- APT61_RS21710 45907f478b25404c37c140a69850c6e7 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.746 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 APT61_RS21710 45907f478b25404c37c140a69850c6e7 238 PANTHER PTHR11953 1 238 5.3E-90 T 22-04-2016 APT61_RS21710 45907f478b25404c37c140a69850c6e7 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 223 1.1E-12 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APT61_RS21710 45907f478b25404c37c140a69850c6e7 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.4E-24 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APT61_RS21710 45907f478b25404c37c140a69850c6e7 238 SUPERFAMILY SSF55666 153 237 2.88E-26 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APT61_RS21710 45907f478b25404c37c140a69850c6e7 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 3.1E-115 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 APT61_RS21710 45907f478b25404c37c140a69850c6e7 238 SUPERFAMILY SSF54211 1 181 1.27E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS21710 45907f478b25404c37c140a69850c6e7 238 Gene3D G3DSA:3.30.230.70 9 237 9.5E-35 T 22-04-2016 IPR027408 PNPase/RNase PH domain APT61_RS21710 45907f478b25404c37c140a69850c6e7 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site APT61_RS21710 45907f478b25404c37c140a69850c6e7 238 PANTHER PTHR11953:SF0 1 238 5.3E-90 T 22-04-2016 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 Gene3D G3DSA:2.40.37.10 213 358 6.4E-54 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 Pfam PF00842 Alanine racemase, C-terminal domain 234 357 3.4E-37 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 PANTHER PTHR30511:SF4 1 359 1.7E-245 T 22-04-2016 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 PRINTS PR00992 Alanine racemase signature 288 305 9.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 PRINTS PR00992 Alanine racemase signature 120 132 9.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 PRINTS PR00992 Alanine racemase signature 340 353 9.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 PRINTS PR00992 Alanine racemase signature 155 166 9.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 PRINTS PR00992 Alanine racemase signature 60 78 9.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 PRINTS PR00992 Alanine racemase signature 192 219 9.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 PRINTS PR00992 Alanine racemase signature 250 265 9.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 PRINTS PR00992 Alanine racemase signature 26 42 9.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 PRINTS PR00992 Alanine racemase signature 267 282 9.3E-77 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 Gene3D G3DSA:3.20.20.10 11 212 1.6E-76 T 22-04-2016 IPR029066 PLP-binding barrel APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 SMART SM01005 234 358 6.7E-61 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 Hamap MF_01201 Alanine racemase. 1 358 35.093 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 SUPERFAMILY SSF51419 8 235 8.72E-70 T 22-04-2016 IPR029066 PLP-binding barrel APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 TIGRFAM TIGR00492 alr: alanine racemase 3 359 1.3E-146 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 2.9E-72 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 SUPERFAMILY SSF50621 227 358 4.88E-44 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APT61_RS20895 7e127ff9baf59eedf2801925d2383041 359 PANTHER PTHR30511 1 359 1.7E-245 T 22-04-2016 APT61_RS16045 ff76f603cdd3625943811b9d33f7b731 227 PANTHER PTHR30625 1 225 3.0E-79 T 22-04-2016 APT61_RS16045 ff76f603cdd3625943811b9d33f7b731 227 PANTHER PTHR30625:SF3 1 225 3.0E-79 T 22-04-2016 APT61_RS16045 ff76f603cdd3625943811b9d33f7b731 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 75 204 2.7E-42 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APT61_RS16045 ff76f603cdd3625943811b9d33f7b731 227 TIGRFAM TIGR02796 tolQ: protein TolQ 2 216 1.4E-93 T 22-04-2016 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 APT61_RS07675 3c951f2c106412b82601819677d4fed4 163 PIRSF PIRSF000441 3 162 9.7E-45 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APT61_RS07675 3c951f2c106412b82601819677d4fed4 163 PANTHER PTHR23416:SF55 3 159 5.1E-45 T 22-04-2016 APT61_RS07675 3c951f2c106412b82601819677d4fed4 163 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 142 2.4E-8 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS07675 3c951f2c106412b82601819677d4fed4 163 TIGRFAM TIGR04016 WcaB: colanic acid biosynthesis acetyltransferase WcaB 18 163 2.7E-96 T 22-04-2016 IPR024027 Colanic acid biosynthesis, acetyltransferase, WcaB GO:0016747 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00936 APT61_RS07675 3c951f2c106412b82601819677d4fed4 163 SUPERFAMILY SSF51161 12 159 1.01E-30 T 22-04-2016 IPR011004 Trimeric LpxA-like APT61_RS07675 3c951f2c106412b82601819677d4fed4 163 PANTHER PTHR23416 3 159 5.1E-45 T 22-04-2016 APT61_RS07675 3c951f2c106412b82601819677d4fed4 163 Gene3D G3DSA:2.160.10.10 61 160 5.0E-22 T 22-04-2016 APT61_RS06730 ddd50760bc20024dbae2b9f5bd570661 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 2.2E-63 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS06730 ddd50760bc20024dbae2b9f5bd570661 260 SUPERFAMILY SSF53850 1 257 9.97E-66 T 22-04-2016 APT61_RS06730 ddd50760bc20024dbae2b9f5bd570661 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APT61_RS06730 ddd50760bc20024dbae2b9f5bd570661 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 2.2E-101 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 APT61_RS06730 ddd50760bc20024dbae2b9f5bd570661 260 PANTHER PTHR18966:SF237 24 253 5.7E-163 T 22-04-2016 APT61_RS06730 ddd50760bc20024dbae2b9f5bd570661 260 SMART SM00062 27 256 8.4E-71 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS06730 ddd50760bc20024dbae2b9f5bd570661 260 PANTHER PTHR18966 24 253 5.7E-163 T 22-04-2016 APT61_RS06730 ddd50760bc20024dbae2b9f5bd570661 260 Gene3D G3DSA:3.40.190.10 26 113 1.8E-43 T 22-04-2016 APT61_RS06730 ddd50760bc20024dbae2b9f5bd570661 260 Gene3D G3DSA:3.40.190.10 215 257 1.8E-43 T 22-04-2016 APT61_RS06730 ddd50760bc20024dbae2b9f5bd570661 260 Gene3D G3DSA:3.40.190.10 116 212 6.5E-31 T 22-04-2016 APT61_RS11985 9aa2fee07c30b9bdee0f63d48ae37269 207 Gene3D G3DSA:1.20.1050.10 83 200 9.9E-33 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS11985 9aa2fee07c30b9bdee0f63d48ae37269 207 Pfam PF00043 Glutathione S-transferase, C-terminal domain 136 196 1.1E-6 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal APT61_RS11985 9aa2fee07c30b9bdee0f63d48ae37269 207 Gene3D G3DSA:3.40.30.10 1 82 1.2E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS11985 9aa2fee07c30b9bdee0f63d48ae37269 207 PANTHER PTHR11260 2 200 2.9E-55 T 22-04-2016 APT61_RS11985 9aa2fee07c30b9bdee0f63d48ae37269 207 PANTHER PTHR11260:SF253 2 200 2.9E-55 T 22-04-2016 APT61_RS11985 9aa2fee07c30b9bdee0f63d48ae37269 207 SUPERFAMILY SSF47616 79 200 4.32E-28 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS11985 9aa2fee07c30b9bdee0f63d48ae37269 207 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 75 1.0E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APT61_RS11985 9aa2fee07c30b9bdee0f63d48ae37269 207 SUPERFAMILY SSF52833 1 84 1.01E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 SMART SM00382 519 705 5.0E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 Pfam PF00664 ABC transporter transmembrane region 182 440 6.8E-20 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 PANTHER PTHR24221:SF248 149 716 8.9E-214 T 22-04-2016 APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 PANTHER PTHR24221:SF248 49 90 8.9E-214 T 22-04-2016 APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 Pfam PF03412 Peptidase C39 family 26 150 6.9E-7 T 22-04-2016 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 Gene3D G3DSA:3.90.70.10 25 150 9.5E-39 T 22-04-2016 APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 29 723 2.9E-286 T 22-04-2016 IPR017750 ATPase, type I secretion system APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 ProSitePatterns PS00211 ABC transporters family signature. 631 645 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 SUPERFAMILY SSF90123 166 474 5.23E-45 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 Pfam PF00005 ABC transporter 510 659 8.9E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 SUPERFAMILY SSF52540 486 717 7.72E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 PANTHER PTHR24221 149 716 8.9E-214 T 22-04-2016 APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 PANTHER PTHR24221 49 90 8.9E-214 T 22-04-2016 APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 Gene3D G3DSA:1.20.1560.10 170 462 9.9E-45 T 22-04-2016 APT61_RS06555 777613bc9834f8dd89ee3be8990e48ef 728 Gene3D G3DSA:3.40.50.300 492 717 8.9E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07465 016637948d83abf81c59a221ccd6a3ca 350 Pfam PF01791 DeoC/LacD family aldolase 69 326 3.2E-73 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APT61_RS07465 016637948d83abf81c59a221ccd6a3ca 350 Gene3D G3DSA:3.20.20.70 52 346 1.7E-99 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS07465 016637948d83abf81c59a221ccd6a3ca 350 SUPERFAMILY SSF51569 57 242 6.59E-65 T 22-04-2016 APT61_RS07465 016637948d83abf81c59a221ccd6a3ca 350 SUPERFAMILY SSF51569 270 344 6.59E-65 T 22-04-2016 APT61_RS07465 016637948d83abf81c59a221ccd6a3ca 350 SMART SM01133 68 326 8.3E-42 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APT61_RS02355 ef1a1e2d18b89c6bc7ba10ea6a783fb7 293 PIRSF PIRSF000401 1 293 1.2E-92 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APT61_RS02355 ef1a1e2d18b89c6bc7ba10ea6a783fb7 293 PANTHER PTHR18895:SF69 10 290 5.1E-173 T 22-04-2016 APT61_RS02355 ef1a1e2d18b89c6bc7ba10ea6a783fb7 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 5.9E-104 T 22-04-2016 APT61_RS02355 ef1a1e2d18b89c6bc7ba10ea6a783fb7 293 PANTHER PTHR18895 10 290 5.1E-173 T 22-04-2016 APT61_RS02355 ef1a1e2d18b89c6bc7ba10ea6a783fb7 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 2.6E-125 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APT61_RS02355 ef1a1e2d18b89c6bc7ba10ea6a783fb7 293 Gene3D G3DSA:3.40.50.150 98 286 1.8E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS02355 ef1a1e2d18b89c6bc7ba10ea6a783fb7 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 33.414 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 APT61_RS02355 ef1a1e2d18b89c6bc7ba10ea6a783fb7 293 SUPERFAMILY SSF53335 43 291 3.7E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS07455 4aa64f0873e814d353737b41fee885f9 256 PIRSF PIRSF000513 6 256 1.5E-92 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS07455 4aa64f0873e814d353737b41fee885f9 256 SUPERFAMILY SSF53613 8 252 2.0E-57 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS07455 4aa64f0873e814d353737b41fee885f9 256 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 13 253 28.882 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS07455 4aa64f0873e814d353737b41fee885f9 256 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 89 106 1.3E-41 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS07455 4aa64f0873e814d353737b41fee885f9 256 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 1.3E-41 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS07455 4aa64f0873e814d353737b41fee885f9 256 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 32 53 1.3E-41 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS07455 4aa64f0873e814d353737b41fee885f9 256 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 63 71 1.3E-41 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS07455 4aa64f0873e814d353737b41fee885f9 256 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 163 180 1.3E-41 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS07455 4aa64f0873e814d353737b41fee885f9 256 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 19 26 1.3E-41 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS07455 4aa64f0873e814d353737b41fee885f9 256 PANTHER PTHR20857:SF19 11 252 1.3E-76 T 22-04-2016 APT61_RS07455 4aa64f0873e814d353737b41fee885f9 256 Pfam PF02110 Hydroxyethylthiazole kinase family 11 253 1.5E-94 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS07455 4aa64f0873e814d353737b41fee885f9 256 PANTHER PTHR20857 11 252 1.3E-76 T 22-04-2016 APT61_RS07455 4aa64f0873e814d353737b41fee885f9 256 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 11 254 9.3E-89 T 22-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS07455 4aa64f0873e814d353737b41fee885f9 256 Gene3D G3DSA:3.40.1190.20 8 253 5.7E-81 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS12555 8b88a09601991b50ca54fda8192ef94f 769 Pfam PF13237 4Fe-4S dicluster domain 373 427 4.0E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS12555 8b88a09601991b50ca54fda8192ef94f 769 PANTHER PTHR11780 13 482 5.9E-259 T 22-04-2016 APT61_RS12555 8b88a09601991b50ca54fda8192ef94f 769 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 1.2E-180 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 APT61_RS12555 8b88a09601991b50ca54fda8192ef94f 769 Pfam PF10531 SLBB domain 296 344 3.2E-13 T 22-04-2016 IPR019554 Soluble ligand binding domain APT61_RS12555 8b88a09601991b50ca54fda8192ef94f 769 Gene3D G3DSA:1.10.1060.10 331 446 6.8E-17 T 22-04-2016 APT61_RS12555 8b88a09601991b50ca54fda8192ef94f 769 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 4.8E-47 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain APT61_RS12555 8b88a09601991b50ca54fda8192ef94f 769 SUPERFAMILY SSF46548 336 443 4.19E-19 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APT61_RS12555 8b88a09601991b50ca54fda8192ef94f 769 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 1.3E-33 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain APT61_RS12555 8b88a09601991b50ca54fda8192ef94f 769 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS12555 8b88a09601991b50ca54fda8192ef94f 769 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS12555 8b88a09601991b50ca54fda8192ef94f 769 SUPERFAMILY SSF142019 94 303 2.09E-62 T 22-04-2016 APT61_RS12555 8b88a09601991b50ca54fda8192ef94f 769 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 746 266.946 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 APT61_RS12555 8b88a09601991b50ca54fda8192ef94f 769 PANTHER PTHR11780:SF1 13 482 5.9E-259 T 22-04-2016 APT61_RS08000 bf01dcbd9ec7f14ddb744c909ce6a7cb 163 Gene3D G3DSA:3.40.960.10 21 153 8.5E-46 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 APT61_RS08000 bf01dcbd9ec7f14ddb744c909ce6a7cb 163 Pfam PF03852 DNA mismatch endonuclease Vsr 2 74 1.2E-32 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 APT61_RS08000 bf01dcbd9ec7f14ddb744c909ce6a7cb 163 PIRSF PIRSF018267 1 150 3.4E-47 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 APT61_RS08000 bf01dcbd9ec7f14ddb744c909ce6a7cb 163 SUPERFAMILY SSF52980 2 151 1.61E-50 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APT61_RS08000 bf01dcbd9ec7f14ddb744c909ce6a7cb 163 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 1.7E-48 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 APT61_RS06015 5dae7a411ea591fe84ce8a28329b32cc 372 PIRSF PIRSF004640 1 363 8.5E-148 T 22-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APT61_RS06015 5dae7a411ea591fe84ce8a28329b32cc 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 357 34.416 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APT61_RS06015 5dae7a411ea591fe84ce8a28329b32cc 372 SUPERFAMILY SSF56014 265 352 7.85E-10 T 22-04-2016 APT61_RS06015 5dae7a411ea591fe84ce8a28329b32cc 372 Gene3D G3DSA:3.20.20.70 30 132 1.6E-9 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS06015 5dae7a411ea591fe84ce8a28329b32cc 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 350 1.4E-125 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APT61_RS06015 5dae7a411ea591fe84ce8a28329b32cc 372 SUPERFAMILY SSF51717 15 208 7.45E-10 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 APT61_RS06015 5dae7a411ea591fe84ce8a28329b32cc 372 PANTHER PTHR30454 1 371 5.5E-224 T 22-04-2016 APT61_RS06015 5dae7a411ea591fe84ce8a28329b32cc 372 Pfam PF04551 GcpE protein 13 353 1.2E-131 T 22-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 Gene3D G3DSA:2.60.34.10 390 531 2.7E-70 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 Pfam PF00012 Hsp70 protein 4 602 8.6E-266 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 PRINTS PR00301 70kDa heat shock protein signature 138 158 2.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 PRINTS PR00301 70kDa heat shock protein signature 365 385 2.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 PRINTS PR00301 70kDa heat shock protein signature 388 407 2.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 PRINTS PR00301 70kDa heat shock protein signature 54 62 2.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 PRINTS PR00301 70kDa heat shock protein signature 198 208 2.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 PRINTS PR00301 70kDa heat shock protein signature 334 350 2.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 PRINTS PR00301 70kDa heat shock protein signature 469 485 2.1E-80 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 SUPERFAMILY SSF53067 187 382 1.3E-67 T 22-04-2016 APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 PANTHER PTHR19375:SF173 2 639 0.0 T 22-04-2016 APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 SUPERFAMILY SSF53067 4 183 7.34E-65 T 22-04-2016 APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 SUPERFAMILY SSF100934 507 602 1.96E-27 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 Gene3D G3DSA:3.30.420.40 319 361 8.3E-33 T 22-04-2016 APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 Gene3D G3DSA:3.30.420.40 197 229 8.3E-33 T 22-04-2016 APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 Gene3D G3DSA:3.30.420.40 4 52 5.1E-63 T 22-04-2016 APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 Gene3D G3DSA:3.30.420.40 119 196 5.1E-63 T 22-04-2016 APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 Gene3D G3DSA:3.30.30.30 53 107 1.3E-27 T 22-04-2016 APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 635 36.954 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 1.9E-291 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 Gene3D G3DSA:1.20.1270.10 532 601 1.3E-26 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 Gene3D G3DSA:3.90.640.10 230 315 1.1E-31 T 22-04-2016 APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 SUPERFAMILY SSF100920 384 539 2.75E-60 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 PANTHER PTHR19375 2 639 0.0 T 22-04-2016 APT61_RS19000 a2c0cb0f3d9dcce3967cd7bc2cf8a263 639 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site APT61_RS06325 c7a9bae905dbbcb4f03e8b954511c800 303 Gene3D G3DSA:3.40.50.1100 146 295 6.0E-81 T 22-04-2016 APT61_RS06325 c7a9bae905dbbcb4f03e8b954511c800 303 Gene3D G3DSA:3.40.50.1100 2 39 6.0E-81 T 22-04-2016 APT61_RS06325 c7a9bae905dbbcb4f03e8b954511c800 303 PANTHER PTHR10314 2 295 7.9E-191 T 22-04-2016 APT61_RS06325 c7a9bae905dbbcb4f03e8b954511c800 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 1.0E-125 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APT61_RS06325 c7a9bae905dbbcb4f03e8b954511c800 303 SUPERFAMILY SSF53686 3 289 6.55E-92 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS06325 c7a9bae905dbbcb4f03e8b954511c800 303 Gene3D G3DSA:3.40.50.1100 40 139 6.9E-39 T 22-04-2016 APT61_RS06325 c7a9bae905dbbcb4f03e8b954511c800 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 281 3.8E-68 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS06325 c7a9bae905dbbcb4f03e8b954511c800 303 PANTHER PTHR10314:SF100 2 295 7.9E-191 T 22-04-2016 APT61_RS06325 c7a9bae905dbbcb4f03e8b954511c800 303 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 9.6E-166 T 22-04-2016 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APT61_RS06325 c7a9bae905dbbcb4f03e8b954511c800 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 APT61_RS10765 b9dc9af1fc7a289fb43e98d645d0910e 704 PANTHER PTHR32552 1 701 0.0 T 22-04-2016 APT61_RS10765 b9dc9af1fc7a289fb43e98d645d0910e 704 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 155 2.6E-23 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS10765 b9dc9af1fc7a289fb43e98d645d0910e 704 PANTHER PTHR32552:SF13 1 701 0.0 T 22-04-2016 APT61_RS10765 b9dc9af1fc7a289fb43e98d645d0910e 704 Gene3D G3DSA:2.40.170.20 156 699 8.2E-113 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS10765 b9dc9af1fc7a289fb43e98d645d0910e 704 Gene3D G3DSA:2.170.130.10 31 155 8.0E-30 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS10765 b9dc9af1fc7a289fb43e98d645d0910e 704 SUPERFAMILY SSF56935 27 700 1.68E-126 T 22-04-2016 APT61_RS10765 b9dc9af1fc7a289fb43e98d645d0910e 704 Pfam PF00593 TonB dependent receptor 452 699 5.1E-37 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS02015 4d5756ad4035bd1bdd17330a4565feee 95 SUPERFAMILY SSF75169 1 95 2.94E-30 T 22-04-2016 IPR027396 DsrEFH-like APT61_RS02015 4d5756ad4035bd1bdd17330a4565feee 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 27.472 T 22-04-2016 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 APT61_RS02015 4d5756ad4035bd1bdd17330a4565feee 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 2.0E-31 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 APT61_RS02015 4d5756ad4035bd1bdd17330a4565feee 95 Pfam PF04077 DsrH like protein 7 90 1.5E-29 T 22-04-2016 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 APT61_RS02015 4d5756ad4035bd1bdd17330a4565feee 95 Gene3D G3DSA:3.40.1260.10 1 93 2.1E-33 T 22-04-2016 IPR027396 DsrEFH-like APT61_RS02015 4d5756ad4035bd1bdd17330a4565feee 95 PANTHER PTHR37526 1 95 3.0E-32 T 22-04-2016 APT61_RS18790 705d12d0c251da9403013827a88e474a 267 PANTHER PTHR32552 1 263 2.0E-66 T 22-04-2016 APT61_RS18790 705d12d0c251da9403013827a88e474a 267 Pfam PF00665 Integrase core domain 103 218 1.2E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 APT61_RS18790 705d12d0c251da9403013827a88e474a 267 Gene3D G3DSA:3.30.420.10 97 254 7.2E-24 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS18790 705d12d0c251da9403013827a88e474a 267 Pfam PF13276 HTH-like domain 26 80 2.4E-18 T 22-04-2016 IPR025948 HTH-like domain APT61_RS18790 705d12d0c251da9403013827a88e474a 267 SUPERFAMILY SSF53098 98 258 1.41E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS10090 823ca1d840a68e7b0422f2bed9d524dc 734 SUPERFAMILY SSF51445 304 626 1.41E-71 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS10090 823ca1d840a68e7b0422f2bed9d524dc 734 SUPERFAMILY SSF49303 192 305 6.37E-20 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APT61_RS10090 823ca1d840a68e7b0422f2bed9d524dc 734 PANTHER PTHR10066 159 656 1.3E-85 T 22-04-2016 APT61_RS10090 823ca1d840a68e7b0422f2bed9d524dc 734 PANTHER PTHR10066 24 140 1.3E-85 T 22-04-2016 APT61_RS10090 823ca1d840a68e7b0422f2bed9d524dc 734 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 55 135 2.8E-7 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS10090 823ca1d840a68e7b0422f2bed9d524dc 734 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 318 432 1.0E-5 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS10090 823ca1d840a68e7b0422f2bed9d524dc 734 Gene3D G3DSA:3.20.20.80 558 628 1.3E-49 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS10090 823ca1d840a68e7b0422f2bed9d524dc 734 Gene3D G3DSA:3.20.20.80 305 517 1.3E-49 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS10090 823ca1d840a68e7b0422f2bed9d524dc 734 Pfam PF00703 Glycosyl hydrolases family 2 192 306 3.5E-11 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APT61_RS10090 823ca1d840a68e7b0422f2bed9d524dc 734 Gene3D G3DSA:2.60.120.260 16 181 3.3E-32 T 22-04-2016 IPR008979 Galactose-binding domain-like APT61_RS10090 823ca1d840a68e7b0422f2bed9d524dc 734 Gene3D G3DSA:2.60.40.320 182 304 6.4E-16 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APT61_RS10090 823ca1d840a68e7b0422f2bed9d524dc 734 SUPERFAMILY SSF49785 22 187 9.35E-34 T 22-04-2016 IPR008979 Galactose-binding domain-like APT61_RS02485 53a2587c49556576d68baf37ad433649 355 PANTHER PTHR22939 5 352 7.8E-172 T 22-04-2016 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 SMART SM00228 257 339 3.8E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 Gene3D G3DSA:2.40.10.10 146 258 1.4E-38 T 22-04-2016 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 SUPERFAMILY SSF50494 44 254 6.75E-62 T 22-04-2016 IPR009003 Peptidase S1, PA clan APT61_RS02485 53a2587c49556576d68baf37ad433649 355 Gene3D G3DSA:2.30.42.10 259 353 5.7E-26 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 Pfam PF13180 PDZ domain 268 347 4.8E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 2.4E-49 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 2.4E-49 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 2.4E-49 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 2.4E-49 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 PRINTS PR00834 HtrA/DegQ protease family signature 151 175 2.4E-49 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 2.4E-49 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 Gene3D G3DSA:2.40.10.10 34 139 1.8E-32 T 22-04-2016 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 3 352 6.7E-173 T 22-04-2016 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 Pfam PF13365 Trypsin-like peptidase domain 80 215 8.8E-29 T 22-04-2016 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 PANTHER PTHR22939:SF93 5 352 7.8E-172 T 22-04-2016 APT61_RS02485 53a2587c49556576d68baf37ad433649 355 SUPERFAMILY SSF50156 240 347 2.23E-21 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS17650 420da2c97f449fd116a35a790758fbcc 283 PANTHER PTHR30468 1 281 1.4E-100 T 22-04-2016 APT61_RS17650 420da2c97f449fd116a35a790758fbcc 283 SUPERFAMILY SSF51197 5 281 2.75E-96 T 22-04-2016 APT61_RS17650 420da2c97f449fd116a35a790758fbcc 283 Gene3D G3DSA:3.60.130.10 2 281 8.1E-98 T 22-04-2016 APT61_RS17650 420da2c97f449fd116a35a790758fbcc 283 PANTHER PTHR30468:SF2 1 281 1.4E-100 T 22-04-2016 APT61_RS17650 420da2c97f449fd116a35a790758fbcc 283 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 3.4E-65 T 22-04-2016 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: REACT_13 APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 509 4.9E-301 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 PIRSF PIRSF000203 1 508 3.6E-281 T 22-04-2016 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2 APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 426 508 2.3E-35 T 22-04-2016 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2 APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 SMART SM01003 4 137 9.6E-76 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.2E-74 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 22-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 22-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 PANTHER PTHR10160 1 508 0.0 T 22-04-2016 APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 SUPERFAMILY SSF52283 1 168 5.78E-57 T 22-04-2016 APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 Gene3D G3DSA:3.50.50.60 172 201 6.8E-6 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 SMART SM01002 146 311 2.2E-82 T 22-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 SUPERFAMILY SSF51735 137 317 4.14E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 Gene3D G3DSA:3.40.50.1770 1 171 2.7E-71 T 22-04-2016 APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 Gene3D G3DSA:3.40.50.1770 202 371 1.1E-48 T 22-04-2016 APT61_RS12130 0ecf6352c10bf539ae5354c2c4e81428 509 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 6.0E-52 T 22-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal APT61_RS10340 d66e54e34533d57afd53c6b22c9172f2 156 Pfam PF13673 Acetyltransferase (GNAT) domain 28 138 7.0E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS10340 d66e54e34533d57afd53c6b22c9172f2 156 PANTHER PTHR23091 1 135 5.9E-13 T 22-04-2016 APT61_RS10340 d66e54e34533d57afd53c6b22c9172f2 156 Gene3D G3DSA:3.40.630.30 1 155 1.4E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS10340 d66e54e34533d57afd53c6b22c9172f2 156 SUPERFAMILY SSF55729 1 138 4.22E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 PANTHER PTHR11564:SF7 1 435 1.9E-280 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 PANTHER PTHR11564 1 435 1.9E-280 T 22-04-2016 APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 Gene3D G3DSA:1.10.260.30 329 432 2.6E-41 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 SMART SM00382 99 247 8.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 35.049 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 2.7E-181 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.8E-75 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 SMART SM00963 1 86 2.3E-37 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 Gene3D G3DSA:3.40.50.300 94 297 1.5E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 SUPERFAMILY SSF52540 42 354 1.82E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 SMART SM00962 100 296 5.1E-119 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.5E-23 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 SUPERFAMILY SSF47446 298 431 1.44E-46 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 Pfam PF02978 Signal peptide binding domain 329 427 3.9E-33 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 APT61_RS05580 6b07eb9cdc246c51ef319187f79b884e 453 Gene3D G3DSA:1.20.120.140 2 89 9.7E-37 T 22-04-2016 APT61_RS15820 f1bcd7e3bdaca024b766f6d4432abb6a 329 SMART SM00729 14 222 1.1E-4 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APT61_RS15820 f1bcd7e3bdaca024b766f6d4432abb6a 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APT61_RS15820 f1bcd7e3bdaca024b766f6d4432abb6a 329 Gene3D G3DSA:3.20.20.70 3 307 3.9E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS15820 f1bcd7e3bdaca024b766f6d4432abb6a 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 3.0E-106 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APT61_RS15820 f1bcd7e3bdaca024b766f6d4432abb6a 329 PANTHER PTHR22960 5 285 1.1E-129 T 22-04-2016 APT61_RS15820 f1bcd7e3bdaca024b766f6d4432abb6a 329 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 329 37.59 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APT61_RS15820 f1bcd7e3bdaca024b766f6d4432abb6a 329 Pfam PF04055 Radical SAM superfamily 19 181 1.5E-29 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS15820 f1bcd7e3bdaca024b766f6d4432abb6a 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 2.3E-7 T 22-04-2016 APT61_RS15820 f1bcd7e3bdaca024b766f6d4432abb6a 329 SUPERFAMILY SSF102114 5 278 5.1E-70 T 22-04-2016 APT61_RS15820 f1bcd7e3bdaca024b766f6d4432abb6a 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 1.2E-38 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 APT61_RS17425 3dd9b95575ae1e9595acb0dc22d9b239 156 SUPERFAMILY SSF52121 5 154 2.49E-58 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APT61_RS17425 3dd9b95575ae1e9595acb0dc22d9b239 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.7E-60 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APT61_RS17425 3dd9b95575ae1e9595acb0dc22d9b239 156 Gene3D G3DSA:3.40.50.960 2 152 1.3E-62 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APT61_RS17425 3dd9b95575ae1e9595acb0dc22d9b239 156 PANTHER PTHR21058 1 156 3.9E-75 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APT61_RS17425 3dd9b95575ae1e9595acb0dc22d9b239 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.566 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APT61_RS17425 3dd9b95575ae1e9595acb0dc22d9b239 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 4.2E-54 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APT61_RS11015 bdaefc1f1400d1545f748ccc34e9eea2 191 PANTHER PTHR30055 1 186 7.5E-37 T 22-04-2016 APT61_RS11015 bdaefc1f1400d1545f748ccc34e9eea2 191 SUPERFAMILY SSF48498 78 186 1.15E-13 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS11015 bdaefc1f1400d1545f748ccc34e9eea2 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 51 1.3E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS11015 bdaefc1f1400d1545f748ccc34e9eea2 191 PANTHER PTHR30055:SF30 1 186 7.5E-37 T 22-04-2016 APT61_RS11015 bdaefc1f1400d1545f748ccc34e9eea2 191 Gene3D G3DSA:1.10.357.10 6 187 1.1E-30 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS11015 bdaefc1f1400d1545f748ccc34e9eea2 191 SUPERFAMILY SSF46689 5 69 1.49E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS10220 9b1e01c031b30e3485f2056381e25026 424 ProSitePatterns PS00216 Sugar transport proteins signature 1. 290 306 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS10220 9b1e01c031b30e3485f2056381e25026 424 PANTHER PTHR23508 5 423 3.5E-135 T 22-04-2016 APT61_RS10220 9b1e01c031b30e3485f2056381e25026 424 PANTHER PTHR23508:SF17 5 423 3.5E-135 T 22-04-2016 APT61_RS10220 9b1e01c031b30e3485f2056381e25026 424 Pfam PF07690 Major Facilitator Superfamily 16 377 5.4E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS10220 9b1e01c031b30e3485f2056381e25026 424 SUPERFAMILY SSF103473 5 422 9.29E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS10220 9b1e01c031b30e3485f2056381e25026 424 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS10220 9b1e01c031b30e3485f2056381e25026 424 Gene3D G3DSA:1.20.1250.20 233 420 2.6E-18 T 22-04-2016 APT61_RS10220 9b1e01c031b30e3485f2056381e25026 424 Gene3D G3DSA:1.20.1250.20 7 206 1.1E-19 T 22-04-2016 APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 ProSitePatterns PS01164 Copper amine oxidase topaquinone signature. 483 496 - T 22-04-2016 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 Gene3D G3DSA:3.30.457.10 34 111 4.7E-23 T 22-04-2016 IPR012854 Copper amine oxidase-like, N-terminal APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 PANTHER PTHR10638:SF21 70 748 0.0 T 22-04-2016 APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 PANTHER PTHR10638 70 748 0.0 T 22-04-2016 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 Gene3D G3DSA:2.70.98.20 323 749 5.3E-144 T 22-04-2016 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 Pfam PF02727 Copper amine oxidase, N2 domain 122 207 3.3E-20 T 22-04-2016 IPR015800 Copper amine oxidase, N2-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 KEGG: 00260+1.4.3.21|KEGG: 00350+1.4.3.21|KEGG: 00360+1.4.3.21|KEGG: 00410+1.4.3.21|KEGG: 00950+1.4.3.21|KEGG: 00960+1.4.3.21|MetaCyc: PWY-5751 APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 Pfam PF01179 Copper amine oxidase, enzyme domain 335 748 2.7E-128 T 22-04-2016 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 SUPERFAMILY SSF49998 331 749 6.67E-143 T 22-04-2016 IPR015798 Copper amine oxidase, C-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 Pfam PF02728 Copper amine oxidase, N3 domain 214 315 1.4E-24 T 22-04-2016 IPR015802 Copper amine oxidase, N3-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 KEGG: 00260+1.4.3.21|KEGG: 00350+1.4.3.21|KEGG: 00360+1.4.3.21|KEGG: 00410+1.4.3.21|KEGG: 00950+1.4.3.21|KEGG: 00960+1.4.3.21|MetaCyc: PWY-5751 APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 Pfam PF07833 Copper amine oxidase N-terminal domain 35 108 4.6E-10 T 22-04-2016 IPR012854 Copper amine oxidase-like, N-terminal APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 Gene3D G3DSA:3.10.450.40 115 213 6.8E-28 T 22-04-2016 APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 Gene3D G3DSA:3.10.450.40 216 319 6.4E-35 T 22-04-2016 APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 ProSitePatterns PS01165 Copper amine oxidase copper-binding site signature. 712 725 - T 22-04-2016 IPR000269 Copper amine oxidase GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 SUPERFAMILY SSF55383 34 113 2.22E-16 T 22-04-2016 IPR012854 Copper amine oxidase-like, N-terminal APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 SUPERFAMILY SSF54416 120 212 1.08E-22 T 22-04-2016 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 APT61_RS10015 b68764052f7c94064b5ca161451d6c2e 755 SUPERFAMILY SSF54416 214 323 1.87E-28 T 22-04-2016 IPR016182 Copper amine oxidase, N-terminal GO:0005507|GO:0008131|GO:0009308|GO:0048038|GO:0055114 APT61_RS02530 44b83fe973ee3ef5793afe82c4fa35b4 808 SUPERFAMILY SSF141729 35 144 1.83E-10 T 22-04-2016 APT61_RS02530 44b83fe973ee3ef5793afe82c4fa35b4 808 Pfam PF13953 PapC C-terminal domain 728 792 1.4E-9 T 22-04-2016 IPR025949 PapC-like, C-terminal domain APT61_RS02530 44b83fe973ee3ef5793afe82c4fa35b4 808 PANTHER PTHR30451 1 808 3.4E-295 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APT61_RS02530 44b83fe973ee3ef5793afe82c4fa35b4 808 Pfam PF13954 PapC N-terminal domain 37 167 4.3E-15 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 APT61_RS02530 44b83fe973ee3ef5793afe82c4fa35b4 808 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 295 305 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site APT61_RS02530 44b83fe973ee3ef5793afe82c4fa35b4 808 PANTHER PTHR30451:SF8 1 808 3.4E-295 T 22-04-2016 APT61_RS02530 44b83fe973ee3ef5793afe82c4fa35b4 808 Pfam PF00577 Outer membrane usher protein 187 719 6.8E-87 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APT61_RS18455 954e7f4fb9e2fe6ccfe9f3c579c8f05d 264 SUPERFAMILY SSF56276 112 173 3.41E-22 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APT61_RS18455 954e7f4fb9e2fe6ccfe9f3c579c8f05d 264 SUPERFAMILY SSF56276 41 84 3.41E-22 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APT61_RS18455 954e7f4fb9e2fe6ccfe9f3c579c8f05d 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 2.5E-147 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APT61_RS18455 954e7f4fb9e2fe6ccfe9f3c579c8f05d 264 PANTHER PTHR33866:SF1 112 263 8.4E-168 T 22-04-2016 APT61_RS18455 954e7f4fb9e2fe6ccfe9f3c579c8f05d 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 8.5E-30 T 22-04-2016 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APT61_RS18455 954e7f4fb9e2fe6ccfe9f3c579c8f05d 264 PANTHER PTHR33866 15 84 8.4E-168 T 22-04-2016 APT61_RS18455 954e7f4fb9e2fe6ccfe9f3c579c8f05d 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 174.462 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APT61_RS18455 954e7f4fb9e2fe6ccfe9f3c579c8f05d 264 Gene3D G3DSA:3.60.90.10 33 186 1.2E-46 T 22-04-2016 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APT61_RS18455 954e7f4fb9e2fe6ccfe9f3c579c8f05d 264 PANTHER PTHR33866 112 263 8.4E-168 T 22-04-2016 APT61_RS18455 954e7f4fb9e2fe6ccfe9f3c579c8f05d 264 PIRSF PIRSF001356 1 263 1.3E-154 T 22-04-2016 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|UniPathway: UPA00331 APT61_RS18455 954e7f4fb9e2fe6ccfe9f3c579c8f05d 264 PANTHER PTHR33866:SF1 15 84 8.4E-168 T 22-04-2016 APT61_RS08910 9b00178d2a7fb6b325137c53c1006f92 239 Pfam PF07840 FadR C-terminal domain 72 234 2.6E-72 T 22-04-2016 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 APT61_RS08910 9b00178d2a7fb6b325137c53c1006f92 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 234 4.9E-123 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 APT61_RS08910 9b00178d2a7fb6b325137c53c1006f92 239 Gene3D G3DSA:1.20.120.530 80 236 1.9E-67 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS08910 9b00178d2a7fb6b325137c53c1006f92 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.2E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS08910 9b00178d2a7fb6b325137c53c1006f92 239 SUPERFAMILY SSF48008 79 230 8.24E-65 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS08910 9b00178d2a7fb6b325137c53c1006f92 239 Gene3D G3DSA:1.10.10.10 8 76 3.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS08910 9b00178d2a7fb6b325137c53c1006f92 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS08910 9b00178d2a7fb6b325137c53c1006f92 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS08910 9b00178d2a7fb6b325137c53c1006f92 239 SMART SM00345 12 71 1.0E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS08910 9b00178d2a7fb6b325137c53c1006f92 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 161.424 T 22-04-2016 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 APT61_RS08910 9b00178d2a7fb6b325137c53c1006f92 239 PANTHER PTHR11751:SF402 13 97 5.3E-59 T 22-04-2016 APT61_RS08910 9b00178d2a7fb6b325137c53c1006f92 239 PANTHER PTHR11751 13 97 5.3E-59 T 22-04-2016 APT61_RS08910 9b00178d2a7fb6b325137c53c1006f92 239 SUPERFAMILY SSF46785 11 88 2.28E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15145 fdbfac4252e6327cf3d90a92fc6ebc12 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 319 4.6E-29 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APT61_RS15145 fdbfac4252e6327cf3d90a92fc6ebc12 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APT61_RS15145 fdbfac4252e6327cf3d90a92fc6ebc12 572 Gene3D G3DSA:3.40.50.970 350 550 1.1E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS15145 fdbfac4252e6327cf3d90a92fc6ebc12 572 SUPERFAMILY SSF52467 182 352 1.12E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS15145 fdbfac4252e6327cf3d90a92fc6ebc12 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 2.7E-43 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APT61_RS15145 fdbfac4252e6327cf3d90a92fc6ebc12 572 PANTHER PTHR18968:SF12 1 572 0.0 T 22-04-2016 APT61_RS15145 fdbfac4252e6327cf3d90a92fc6ebc12 572 SUPERFAMILY SSF52518 2 178 4.68E-44 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS15145 fdbfac4252e6327cf3d90a92fc6ebc12 572 SUPERFAMILY SSF52518 357 557 7.51E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS15145 fdbfac4252e6327cf3d90a92fc6ebc12 572 Gene3D G3DSA:3.40.50.1220 185 341 1.7E-42 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS15145 fdbfac4252e6327cf3d90a92fc6ebc12 572 PANTHER PTHR18968 1 572 0.0 T 22-04-2016 APT61_RS15145 fdbfac4252e6327cf3d90a92fc6ebc12 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 4.7E-41 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APT61_RS15145 fdbfac4252e6327cf3d90a92fc6ebc12 572 Gene3D G3DSA:3.40.50.970 1 173 3.5E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS04925 ac817a4902688e3040500791a3eb6ab6 391 PANTHER PTHR30386 1 377 6.6E-203 T 22-04-2016 APT61_RS04925 ac817a4902688e3040500791a3eb6ab6 391 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 21 346 3.0E-141 T 22-04-2016 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 APT61_RS04925 ac817a4902688e3040500791a3eb6ab6 391 Pfam PF00529 HlyD membrane-fusion protein of T1SS 37 347 3.2E-16 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APT61_RS04925 ac817a4902688e3040500791a3eb6ab6 391 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 290 4.4E-13 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT61_RS04925 ac817a4902688e3040500791a3eb6ab6 391 SUPERFAMILY SSF111369 57 114 1.07E-6 T 22-04-2016 APT61_RS04925 ac817a4902688e3040500791a3eb6ab6 391 Gene3D G3DSA:2.40.50.100 61 95 2.2E-18 T 22-04-2016 APT61_RS04925 ac817a4902688e3040500791a3eb6ab6 391 Gene3D G3DSA:2.40.50.100 216 249 2.2E-18 T 22-04-2016 APT61_RS04925 ac817a4902688e3040500791a3eb6ab6 391 SUPERFAMILY SSF111369 192 275 1.2E-8 T 22-04-2016 APT61_RS04925 ac817a4902688e3040500791a3eb6ab6 391 PANTHER PTHR30386:SF6 1 377 6.6E-203 T 22-04-2016 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 SUPERFAMILY SSF53383 130 562 1.74E-98 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 PANTHER PTHR11751:SF406 131 459 5.8E-246 T 22-04-2016 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 PIRSF PIRSF009393 1 712 2.0E-274 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 1.1E-46 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 Gene3D G3DSA:3.90.1150.10 426 586 2.8E-64 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 PANTHER PTHR11751 482 490 5.8E-246 T 22-04-2016 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 PANTHER PTHR11751 510 630 5.8E-246 T 22-04-2016 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 PANTHER PTHR11751 131 459 5.8E-246 T 22-04-2016 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 544 8.8E-189 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 Gene3D G3DSA:3.90.100.10 587 709 7.4E-39 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 1.5E-27 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 PANTHER PTHR11751:SF406 482 490 5.8E-246 T 22-04-2016 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 PANTHER PTHR11751:SF406 510 630 5.8E-246 T 22-04-2016 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 Gene3D G3DSA:3.40.640.10 130 423 1.3E-97 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS18175 7ec7032c2f175191567df36c6dd5a4d3 712 SUPERFAMILY SSF55904 567 708 1.83E-45 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APT61_RS08175 b65c1dc518e475973ff78798122bbeea 266 PANTHER PTHR18966:SF189 1 264 1.8E-168 T 22-04-2016 APT61_RS08175 b65c1dc518e475973ff78798122bbeea 266 PANTHER PTHR18966 1 264 1.8E-168 T 22-04-2016 APT61_RS08175 b65c1dc518e475973ff78798122bbeea 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APT61_RS08175 b65c1dc518e475973ff78798122bbeea 266 Gene3D G3DSA:3.40.190.10 38 119 6.3E-46 T 22-04-2016 APT61_RS08175 b65c1dc518e475973ff78798122bbeea 266 Gene3D G3DSA:3.40.190.10 224 265 6.3E-46 T 22-04-2016 APT61_RS08175 b65c1dc518e475973ff78798122bbeea 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 261 7.3E-72 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS08175 b65c1dc518e475973ff78798122bbeea 266 SMART SM00062 42 263 1.3E-85 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS08175 b65c1dc518e475973ff78798122bbeea 266 SMART SM00079 42 262 1.2E-4 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 APT61_RS08175 b65c1dc518e475973ff78798122bbeea 266 Gene3D G3DSA:3.40.190.10 120 223 4.8E-34 T 22-04-2016 APT61_RS08175 b65c1dc518e475973ff78798122bbeea 266 SUPERFAMILY SSF53850 15 264 5.58E-76 T 22-04-2016 APT61_RS18940 f7cf521f5aa0a81bf1d0101d4c4e2b92 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 34.775 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS18940 f7cf521f5aa0a81bf1d0101d4c4e2b92 273 PANTHER PTHR20836 5 273 2.8E-103 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS18940 f7cf521f5aa0a81bf1d0101d4c4e2b92 273 Gene3D G3DSA:3.40.50.720 5 167 1.5E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS18940 f7cf521f5aa0a81bf1d0101d4c4e2b92 273 PANTHER PTHR20836:SF0 5 273 2.8E-103 T 22-04-2016 APT61_RS18940 f7cf521f5aa0a81bf1d0101d4c4e2b92 273 PIRSF PIRSF000161 4 272 4.5E-91 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS18940 f7cf521f5aa0a81bf1d0101d4c4e2b92 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 3.8E-41 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS18940 f7cf521f5aa0a81bf1d0101d4c4e2b92 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS18940 f7cf521f5aa0a81bf1d0101d4c4e2b92 273 SUPERFAMILY SSF51735 240 272 2.74E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS18940 f7cf521f5aa0a81bf1d0101d4c4e2b92 273 SUPERFAMILY SSF51735 5 130 2.74E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS18940 f7cf521f5aa0a81bf1d0101d4c4e2b92 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 269 3.2E-110 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS18940 f7cf521f5aa0a81bf1d0101d4c4e2b92 273 SUPERFAMILY SSF55347 131 240 5.67E-37 T 22-04-2016 APT61_RS18940 f7cf521f5aa0a81bf1d0101d4c4e2b92 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 3.3E-42 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS18285 bb22b945d254017e39122f3d293f72e1 385 PANTHER PTHR33744 1 384 8.8E-182 T 22-04-2016 APT61_RS18285 bb22b945d254017e39122f3d293f72e1 385 Pfam PF05651 Putative sugar diacid recognition 6 138 6.6E-49 T 22-04-2016 IPR008599 Putative sugar diacid recognition APT61_RS18285 bb22b945d254017e39122f3d293f72e1 385 Gene3D G3DSA:1.10.10.60 339 358 5.9E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS18285 bb22b945d254017e39122f3d293f72e1 385 PANTHER PTHR33744:SF1 1 384 8.8E-182 T 22-04-2016 APT61_RS18285 bb22b945d254017e39122f3d293f72e1 385 Pfam PF13556 PucR C-terminal helix-turn-helix domain 323 381 1.0E-22 T 22-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain APT61_RS09165 5c0e00aad61247a5508bad8e99425960 558 SUPERFAMILY SSF52091 450 556 1.75E-14 T 22-04-2016 IPR002645 STAS domain APT61_RS09165 5c0e00aad61247a5508bad8e99425960 558 ProSitePatterns PS01130 SLC26A transporters signature. 57 78 - T 22-04-2016 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 APT61_RS09165 5c0e00aad61247a5508bad8e99425960 558 PANTHER PTHR11814:SF112 11 558 1.7E-287 T 22-04-2016 APT61_RS09165 5c0e00aad61247a5508bad8e99425960 558 TIGRFAM TIGR00815 sulP: sulfate permease 17 554 2.3E-146 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 APT61_RS09165 5c0e00aad61247a5508bad8e99425960 558 Gene3D G3DSA:3.30.750.24 450 557 1.2E-12 T 22-04-2016 IPR002645 STAS domain APT61_RS09165 5c0e00aad61247a5508bad8e99425960 558 Pfam PF01740 STAS domain 450 553 2.4E-11 T 22-04-2016 IPR002645 STAS domain APT61_RS09165 5c0e00aad61247a5508bad8e99425960 558 Pfam PF00916 Sulfate permease family 28 411 1.1E-74 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 APT61_RS09165 5c0e00aad61247a5508bad8e99425960 558 PANTHER PTHR11814 11 558 1.7E-287 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 APT61_RS21860 5f5654865445facfef9e9cbba4840a48 499 Pfam PF07690 Major Facilitator Superfamily 22 414 2.0E-57 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS21860 5f5654865445facfef9e9cbba4840a48 499 PANTHER PTHR23501:SF73 2 499 6.6E-189 T 22-04-2016 APT61_RS21860 5f5654865445facfef9e9cbba4840a48 499 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 489 1.8E-81 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APT61_RS21860 5f5654865445facfef9e9cbba4840a48 499 PANTHER PTHR23501 2 499 6.6E-189 T 22-04-2016 APT61_RS21860 5f5654865445facfef9e9cbba4840a48 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 1.1E-10 T 22-04-2016 APT61_RS21860 5f5654865445facfef9e9cbba4840a48 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 21 45 1.1E-10 T 22-04-2016 APT61_RS21860 5f5654865445facfef9e9cbba4840a48 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 206 224 1.1E-10 T 22-04-2016 APT61_RS21860 5f5654865445facfef9e9cbba4840a48 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 1.1E-10 T 22-04-2016 APT61_RS21860 5f5654865445facfef9e9cbba4840a48 499 SUPERFAMILY SSF103473 464 493 2.49E-78 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS21860 5f5654865445facfef9e9cbba4840a48 499 SUPERFAMILY SSF103473 252 424 2.49E-78 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS21860 5f5654865445facfef9e9cbba4840a48 499 SUPERFAMILY SSF103473 13 200 2.49E-78 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS21860 5f5654865445facfef9e9cbba4840a48 499 Gene3D G3DSA:1.20.1250.20 21 200 1.5E-33 T 22-04-2016 APT61_RS21860 5f5654865445facfef9e9cbba4840a48 499 Gene3D G3DSA:1.20.1250.20 267 425 1.5E-26 T 22-04-2016 APT61_RS21860 5f5654865445facfef9e9cbba4840a48 499 Gene3D G3DSA:1.20.1250.20 465 497 1.5E-26 T 22-04-2016 APT61_RS08365 d49686a2f4f8b06dbb8bed86966ba6b8 329 Gene3D G3DSA:3.40.50.2300 149 297 1.1E-54 T 22-04-2016 APT61_RS08365 d49686a2f4f8b06dbb8bed86966ba6b8 329 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 319 2.9E-91 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APT61_RS08365 d49686a2f4f8b06dbb8bed86966ba6b8 329 PIRSF PIRSF002816 1 326 2.4E-151 T 22-04-2016 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 APT61_RS08365 d49686a2f4f8b06dbb8bed86966ba6b8 329 Gene3D G3DSA:3.40.50.2300 25 148 1.0E-44 T 22-04-2016 APT61_RS08365 d49686a2f4f8b06dbb8bed86966ba6b8 329 SUPERFAMILY SSF53822 26 324 1.46E-68 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS08365 d49686a2f4f8b06dbb8bed86966ba6b8 329 PANTHER PTHR30036:SF1 1 329 9.9E-135 T 22-04-2016 APT61_RS08365 d49686a2f4f8b06dbb8bed86966ba6b8 329 PANTHER PTHR30036 1 329 9.9E-135 T 22-04-2016 APT61_RS19760 540054adf38f25cabec255685e6279e3 421 SUPERFAMILY SSF51905 328 346 3.32E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS19760 540054adf38f25cabec255685e6279e3 421 SUPERFAMILY SSF51905 1 284 3.32E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS19760 540054adf38f25cabec255685e6279e3 421 Gene3D G3DSA:3.30.9.10 206 228 6.9E-9 T 22-04-2016 APT61_RS19760 540054adf38f25cabec255685e6279e3 421 Gene3D G3DSA:3.30.9.10 87 137 6.9E-9 T 22-04-2016 APT61_RS19760 540054adf38f25cabec255685e6279e3 421 Hamap MF_00990 L-2-hydroxyglutarate oxidase LhgO [lhgO]. 1 421 84.094 T 22-04-2016 IPR030862 L-2-hydroxyglutarate oxidase LhgO GO:0034419 KEGG: 00630+1.1.3.15|MetaCyc: PWY-181 APT61_RS19760 540054adf38f25cabec255685e6279e3 421 PANTHER PTHR13847:SF191 2 394 1.8E-130 T 22-04-2016 APT61_RS19760 540054adf38f25cabec255685e6279e3 421 Pfam PF01266 FAD dependent oxidoreductase 3 390 3.5E-72 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APT61_RS19760 540054adf38f25cabec255685e6279e3 421 PANTHER PTHR13847 2 394 1.8E-130 T 22-04-2016 APT61_RS19760 540054adf38f25cabec255685e6279e3 421 Gene3D G3DSA:3.50.50.60 138 205 4.9E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS19760 540054adf38f25cabec255685e6279e3 421 Gene3D G3DSA:3.50.50.60 1 84 4.9E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS17520 c4c31e8d390f8fb27c7481b87f920d23 401 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 277 374 3.6E-22 T 22-04-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain APT61_RS17520 c4c31e8d390f8fb27c7481b87f920d23 401 PANTHER PTHR30337 1 381 8.8E-121 T 22-04-2016 APT61_RS17520 c4c31e8d390f8fb27c7481b87f920d23 401 SUPERFAMILY SSF56300 1 335 1.34E-58 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS17520 c4c31e8d390f8fb27c7481b87f920d23 401 PANTHER PTHR30337:SF0 1 381 8.8E-121 T 22-04-2016 APT61_RS17520 c4c31e8d390f8fb27c7481b87f920d23 401 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 253 6.8E-86 T 22-04-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 APT61_RS17520 c4c31e8d390f8fb27c7481b87f920d23 401 Pfam PF00149 Calcineurin-like phosphoesterase 1 225 4.8E-15 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APT61_RS17520 c4c31e8d390f8fb27c7481b87f920d23 401 Gene3D G3DSA:3.60.21.10 1 273 1.6E-65 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS20995 594908309742b62ec55aff3138926f07 296 PANTHER PTHR32243:SF4 3 296 5.2E-145 T 22-04-2016 APT61_RS20995 594908309742b62ec55aff3138926f07 296 SUPERFAMILY SSF161098 8 296 3.36E-69 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS20995 594908309742b62ec55aff3138926f07 296 PANTHER PTHR32243 3 296 5.2E-145 T 22-04-2016 APT61_RS20995 594908309742b62ec55aff3138926f07 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 289 4.1E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS20995 594908309742b62ec55aff3138926f07 296 Gene3D G3DSA:1.10.3720.10 5 283 1.1E-63 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 Gene3D G3DSA:3.30.450.20 430 541 6.2E-16 T 22-04-2016 APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 Gene3D G3DSA:3.30.450.20 295 414 7.6E-24 T 22-04-2016 APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 Pfam PF08447 PAS fold 452 537 3.3E-9 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 SMART SM00267 671 843 2.4E-55 T 22-04-2016 IPR000160 GGDEF domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 SMART SM00091 302 368 3.5E-11 T 22-04-2016 IPR000014 PAS domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 SMART SM00091 555 623 3.7E-6 T 22-04-2016 IPR000014 PAS domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 SMART SM00091 429 496 1.1 T 22-04-2016 IPR000014 PAS domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 Pfam PF00989 PAS fold 561 668 1.9E-8 T 22-04-2016 IPR013767 PAS fold GO:0006355 APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 SUPERFAMILY SSF55073 687 845 1.8E-45 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 Pfam PF13426 PAS domain 314 415 6.9E-12 T 22-04-2016 IPR000014 PAS domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 Gene3D G3DSA:3.20.20.450 893 1099 1.6E-25 T 22-04-2016 IPR001633 EAL domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 SMART SM00052 854 1098 3.8E-18 T 22-04-2016 IPR001633 EAL domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 Gene3D G3DSA:3.30.70.270 684 849 3.3E-50 T 22-04-2016 APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 299 421 1.0E-30 T 22-04-2016 IPR000014 PAS domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 553 677 8.6E-10 T 22-04-2016 IPR000014 PAS domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 SUPERFAMILY SSF55785 295 414 5.15E-23 T 22-04-2016 IPR000014 PAS domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 Gene3D G3DSA:3.30.450.20 551 669 5.8E-15 T 22-04-2016 APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 Pfam PF00990 Diguanylate cyclase, GGDEF domain 682 837 1.8E-41 T 22-04-2016 IPR000160 GGDEF domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 680 842 1.7E-36 T 22-04-2016 IPR000160 GGDEF domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 SUPERFAMILY SSF55785 541 669 5.41E-16 T 22-04-2016 IPR000014 PAS domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 PANTHER PTHR24423:SF477 1092 1103 2.5E-143 T 22-04-2016 APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 PANTHER PTHR24423:SF477 16 560 2.5E-143 T 22-04-2016 APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 SUPERFAMILY SSF55785 438 545 5.76E-14 T 22-04-2016 IPR000014 PAS domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 Pfam PF00563 EAL domain 891 1093 6.9E-24 T 22-04-2016 IPR001633 EAL domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 SUPERFAMILY SSF141868 893 1100 4.05E-24 T 22-04-2016 IPR001633 EAL domain APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 PANTHER PTHR24423 1092 1103 2.5E-143 T 22-04-2016 APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 PANTHER PTHR24423 16 560 2.5E-143 T 22-04-2016 APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 Pfam PF05231 MASE1 19 294 3.8E-32 T 22-04-2016 IPR007895 MASE1 APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 SMART SM00086 375 417 2.4E-9 T 22-04-2016 IPR001610 PAC motif APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 SMART SM00086 629 671 0.0035 T 22-04-2016 IPR001610 PAC motif APT61_RS07630 645141301471e9b438fd6cdf2b878a49 1108 SMART SM00086 502 543 1.6E-6 T 22-04-2016 IPR001610 PAC motif APT61_RS06760 c05ca7579b060a9a91b0aac1c9623533 120 Gene3D G3DSA:3.30.1130.10 3 120 1.1E-37 T 22-04-2016 APT61_RS06760 c05ca7579b060a9a91b0aac1c9623533 120 SMART SM00905 8 118 1.7E-34 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APT61_RS06760 c05ca7579b060a9a91b0aac1c9623533 120 TIGRFAM TIGR00526 folB_dom: FolB domain 7 120 1.8E-37 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APT61_RS06760 c05ca7579b060a9a91b0aac1c9623533 120 PANTHER PTHR20941:SF6 1 120 2.4E-71 T 22-04-2016 APT61_RS06760 c05ca7579b060a9a91b0aac1c9623533 120 SUPERFAMILY SSF55620 7 120 6.12E-32 T 22-04-2016 APT61_RS06760 c05ca7579b060a9a91b0aac1c9623533 120 Pfam PF02152 Dihydroneopterin aldolase 8 116 2.8E-26 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APT61_RS06760 c05ca7579b060a9a91b0aac1c9623533 120 PANTHER PTHR20941 1 120 2.4E-71 T 22-04-2016 APT61_RS04540 6a305b139d0ca1d030427d1e7cc96aee 252 SMART SM00475 3 250 3.5E-98 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 APT61_RS04540 6a305b139d0ca1d030427d1e7cc96aee 252 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 250 1.0E-25 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APT61_RS04540 6a305b139d0ca1d030427d1e7cc96aee 252 Gene3D G3DSA:3.40.50.1010 4 174 9.3E-49 T 22-04-2016 IPR029060 PIN domain-like APT61_RS04540 6a305b139d0ca1d030427d1e7cc96aee 252 PANTHER PTHR10133 2 250 1.8E-166 T 22-04-2016 APT61_RS04540 6a305b139d0ca1d030427d1e7cc96aee 252 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 143 1.4E-30 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 APT61_RS04540 6a305b139d0ca1d030427d1e7cc96aee 252 SUPERFAMILY SSF88723 4 159 2.21E-38 T 22-04-2016 IPR029060 PIN domain-like APT61_RS04540 6a305b139d0ca1d030427d1e7cc96aee 252 Gene3D G3DSA:1.10.150.20 175 235 1.8E-24 T 22-04-2016 APT61_RS04540 6a305b139d0ca1d030427d1e7cc96aee 252 SMART SM00279 162 197 3.0E-10 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 APT61_RS04540 6a305b139d0ca1d030427d1e7cc96aee 252 SUPERFAMILY SSF47807 160 243 7.63E-24 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APT61_RS04540 6a305b139d0ca1d030427d1e7cc96aee 252 PANTHER PTHR10133:SF39 2 250 1.8E-166 T 22-04-2016 APT61_RS04540 6a305b139d0ca1d030427d1e7cc96aee 252 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 45.176 T 22-04-2016 IPR022895 Flap endonuclease Xni GO:0048256 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 Pfam PF02803 Thiolase, C-terminal domain 271 392 3.0E-52 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 PANTHER PTHR18919 1 392 2.7E-234 T 22-04-2016 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 PANTHER PTHR18919:SF95 1 392 2.7E-234 T 22-04-2016 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 Gene3D G3DSA:3.40.47.10 3 123 4.3E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 Gene3D G3DSA:3.40.47.10 194 276 4.3E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 PIRSF PIRSF000429 1 392 1.4E-134 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 Pfam PF00108 Thiolase, N-terminal domain 4 263 4.1E-105 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 SUPERFAMILY SSF53901 3 270 2.43E-86 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.2E-145 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 SUPERFAMILY SSF53901 272 392 3.4E-43 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 Gene3D G3DSA:3.40.47.10 142 193 2.8E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS04280 2f83cf696bfbad3cafa3e8928bc16108 392 Gene3D G3DSA:3.40.47.10 277 391 2.8E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS11705 19d50c1196186d4a478b6a364e197447 487 PRINTS PR00084 Mannitol dehydrogenase signature 215 228 1.7E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS11705 19d50c1196186d4a478b6a364e197447 487 PRINTS PR00084 Mannitol dehydrogenase signature 176 189 1.7E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS11705 19d50c1196186d4a478b6a364e197447 487 PRINTS PR00084 Mannitol dehydrogenase signature 245 260 1.7E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS11705 19d50c1196186d4a478b6a364e197447 487 PRINTS PR00084 Mannitol dehydrogenase signature 24 34 1.7E-21 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS11705 19d50c1196186d4a478b6a364e197447 487 Gene3D G3DSA:1.10.1040.10 280 484 1.7E-72 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS11705 19d50c1196186d4a478b6a364e197447 487 SUPERFAMILY SSF48179 280 483 1.59E-64 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS11705 19d50c1196186d4a478b6a364e197447 487 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 214 455 3.0E-95 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APT61_RS11705 19d50c1196186d4a478b6a364e197447 487 PANTHER PTHR30562:SF9 13 484 0.0 T 22-04-2016 APT61_RS11705 19d50c1196186d4a478b6a364e197447 487 SUPERFAMILY SSF51735 4 278 7.48E-97 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11705 19d50c1196186d4a478b6a364e197447 487 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 23 185 1.2E-53 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APT61_RS11705 19d50c1196186d4a478b6a364e197447 487 Gene3D G3DSA:3.40.50.720 5 278 2.9E-113 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11705 19d50c1196186d4a478b6a364e197447 487 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 215 227 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS11705 19d50c1196186d4a478b6a364e197447 487 PANTHER PTHR30562 13 484 0.0 T 22-04-2016 APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 Gene3D G3DSA:2.60.40.10 113 220 2.5E-41 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 Gene3D G3DSA:2.60.40.10 14 106 4.3E-19 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 SUPERFAMILY SSF81296 117 223 2.62E-35 T 22-04-2016 IPR014756 Immunoglobulin E-set APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 3.7E-25 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 PIRSF PIRSF000463 6 728 1.7E-282 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 SMART SM00642 247 596 4.9E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 0.0 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 Pfam PF00128 Alpha amylase, catalytic domain 273 342 5.4E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 SUPERFAMILY SSF51445 230 621 1.85E-112 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 PANTHER PTHR10357:SF158 49 725 0.0 T 22-04-2016 APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 PANTHER PTHR10357 49 725 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 Gene3D G3DSA:3.20.20.80 244 611 8.3E-94 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 SUPERFAMILY SSF81296 16 115 1.52E-17 T 22-04-2016 IPR014756 Immunoglobulin E-set APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 Gene3D G3DSA:2.60.40.1180 625 725 1.1E-35 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.365 T 22-04-2016 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00164 APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 SUPERFAMILY SSF51011 624 726 5.32E-33 T 22-04-2016 APT61_RS01625 5c5f420711b7169e220eb3b7cb241b5e 728 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 725 8.3E-24 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 APT61_RS14200 3bcdf7ada6011b3f55d4714253688b52 517 Gene3D G3DSA:2.70.98.10 28 401 1.3E-175 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APT61_RS14200 3bcdf7ada6011b3f55d4714253688b52 517 PANTHER PTHR30504:SF4 7 517 0.0 T 22-04-2016 APT61_RS14200 3bcdf7ada6011b3f55d4714253688b52 517 SUPERFAMILY SSF81296 403 516 1.96E-33 T 22-04-2016 IPR014756 Immunoglobulin E-set APT61_RS14200 3bcdf7ada6011b3f55d4714253688b52 517 PANTHER PTHR30504 7 517 0.0 T 22-04-2016 APT61_RS14200 3bcdf7ada6011b3f55d4714253688b52 517 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 12 515 62.497 T 22-04-2016 IPR023704 Glucan biosynthesis protein G UniPathway: UPA00637 APT61_RS14200 3bcdf7ada6011b3f55d4714253688b52 517 Gene3D G3DSA:2.60.40.10 405 516 1.3E-42 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS14200 3bcdf7ada6011b3f55d4714253688b52 517 SUPERFAMILY SSF74650 29 399 2.64E-165 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APT61_RS14200 3bcdf7ada6011b3f55d4714253688b52 517 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 29 513 2.4E-199 T 22-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 APT61_RS14200 3bcdf7ada6011b3f55d4714253688b52 517 PIRSF PIRSF006281 2 517 7.6E-239 T 22-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 ProSitePatterns PS00455 Putative AMP-binding domain signature. 598 609 - T 22-04-2016 IPR020845 AMP-binding, conserved site APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 Gene3D G3DSA:3.40.50.1820 1224 1287 1.2E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 Gene3D G3DSA:3.40.50.1820 1052 1168 1.2E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 Gene3D G3DSA:2.30.38.10 773 850 1.5E-25 T 22-04-2016 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 SMART SM00824 Thioesterase 1068 1287 4.1E-5 T 22-04-2016 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 Gene3D G3DSA:3.40.50.980 620 772 1.7E-43 T 22-04-2016 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 PANTHER PTHR24095 5 1044 0.0 T 22-04-2016 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 PANTHER PTHR24095 1074 1106 0.0 T 22-04-2016 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 Gene3D G3DSA:3.40.50.980 455 619 1.4E-44 T 22-04-2016 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 SUPERFAMILY SSF52777 191 425 5.56E-34 T 22-04-2016 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 Gene3D G3DSA:3.30.300.30 855 975 3.2E-28 T 22-04-2016 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 SUPERFAMILY SSF47336 967 1039 3.27E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 Pfam PF00550 Phosphopantetheine attachment site 976 1039 1.1E-10 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 Pfam PF00501 AMP-binding enzyme 461 860 1.3E-95 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 SUPERFAMILY SSF56801 424 986 4.19E-147 T 22-04-2016 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 Pfam PF00668 Condensation domain 3 299 9.8E-63 T 22-04-2016 IPR001242 Condensation domain APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 SUPERFAMILY SSF52777 9 183 4.34E-33 T 22-04-2016 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 Pfam PF13193 AMP-binding enzyme C-terminal domain 869 949 2.8E-5 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 Pfam PF00975 Thioesterase domain 1066 1278 2.3E-45 T 22-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 ProSitePatterns PS00012 Phosphopantetheine attachment site. 998 1013 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 PANTHER PTHR24095:SF137 5 1044 0.0 T 22-04-2016 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 PANTHER PTHR24095:SF137 1074 1106 0.0 T 22-04-2016 APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 Gene3D G3DSA:1.10.1200.10 976 1045 6.5E-19 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 481 883 1.3E-125 T 22-04-2016 IPR010071 Amino acid adenylation domain APT61_RS16660 024c58aba458bd5fba16de4e0271749c 1288 SUPERFAMILY SSF53474 1048 1287 2.06E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS19625 580c253085d55d23191cf3d6ac582be0 326 SUPERFAMILY SSF46689 278 325 2.11E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19625 580c253085d55d23191cf3d6ac582be0 326 PANTHER PTHR11019 46 326 7.1E-49 T 22-04-2016 APT61_RS19625 580c253085d55d23191cf3d6ac582be0 326 SMART SM00342 241 323 3.0E-28 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS19625 580c253085d55d23191cf3d6ac582be0 326 Gene3D G3DSA:1.10.10.60 220 277 2.0E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19625 580c253085d55d23191cf3d6ac582be0 326 PANTHER PTHR11019:SF61 46 326 7.1E-49 T 22-04-2016 APT61_RS19625 580c253085d55d23191cf3d6ac582be0 326 SUPERFAMILY SSF46689 224 275 1.25E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19625 580c253085d55d23191cf3d6ac582be0 326 Pfam PF12833 Helix-turn-helix domain 247 323 3.6E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS19625 580c253085d55d23191cf3d6ac582be0 326 Gene3D G3DSA:1.10.10.60 278 324 2.5E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19625 580c253085d55d23191cf3d6ac582be0 326 Gene3D G3DSA:2.60.120.10 72 132 3.0E-4 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS19620 3e2bce3971c6a45a0a6a31854d461f70 696 Gene3D G3DSA:2.170.130.10 24 166 6.3E-36 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS19620 3e2bce3971c6a45a0a6a31854d461f70 696 PANTHER PTHR32552:SF21 1 696 0.0 T 22-04-2016 APT61_RS19620 3e2bce3971c6a45a0a6a31854d461f70 696 Pfam PF00593 TonB dependent receptor 461 694 6.4E-32 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS19620 3e2bce3971c6a45a0a6a31854d461f70 696 PANTHER PTHR32552 1 696 0.0 T 22-04-2016 APT61_RS19620 3e2bce3971c6a45a0a6a31854d461f70 696 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 156 6.4E-24 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS19620 3e2bce3971c6a45a0a6a31854d461f70 696 SUPERFAMILY SSF56935 23 696 1.44E-152 T 22-04-2016 APT61_RS19620 3e2bce3971c6a45a0a6a31854d461f70 696 Gene3D G3DSA:2.40.170.20 170 696 5.9E-162 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS19620 3e2bce3971c6a45a0a6a31854d461f70 696 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 52 696 9.3E-140 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 SUPERFAMILY SSF50249 13 155 6.37E-49 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 Gene3D G3DSA:3.30.930.10 157 500 3.0E-122 T 22-04-2016 APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.513 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 PANTHER PTHR22594:SF4 1 503 3.5E-289 T 22-04-2016 APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 5.1E-237 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 1.8E-15 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 Gene3D G3DSA:2.40.50.140 16 154 6.9E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 PIRSF PIRSF039101 1 505 1.6E-205 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 SUPERFAMILY SSF55681 162 502 1.01E-122 T 22-04-2016 APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.31E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.31E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.31E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.31E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.31E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 PANTHER PTHR22594 1 503 3.5E-289 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS04215 9ef4de86a13e73ad1b42fe95e56c3dce 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 1.7E-81 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS16095 9cd8b4223dfcaabd652e178af881842d 388 Pfam PF00549 CoA-ligase 262 382 4.6E-25 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS16095 9cd8b4223dfcaabd652e178af881842d 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 22-04-2016 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS16095 9cd8b4223dfcaabd652e178af881842d 388 SUPERFAMILY SSF52210 239 385 1.44E-53 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS16095 9cd8b4223dfcaabd652e178af881842d 388 Gene3D G3DSA:3.40.50.261 240 383 2.0E-65 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS16095 9cd8b4223dfcaabd652e178af881842d 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.196 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APT61_RS16095 9cd8b4223dfcaabd652e178af881842d 388 SUPERFAMILY SSF56059 1 238 9.9E-81 T 22-04-2016 APT61_RS16095 9cd8b4223dfcaabd652e178af881842d 388 PIRSF PIRSF001554 1 388 1.6E-154 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APT61_RS16095 9cd8b4223dfcaabd652e178af881842d 388 Gene3D G3DSA:3.30.1490.20 22 95 4.6E-35 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APT61_RS16095 9cd8b4223dfcaabd652e178af881842d 388 PANTHER PTHR11815 1 388 3.5E-234 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APT61_RS16095 9cd8b4223dfcaabd652e178af881842d 388 Gene3D G3DSA:3.30.470.20 96 239 5.1E-57 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS16095 9cd8b4223dfcaabd652e178af881842d 388 Pfam PF08442 ATP-grasp domain 2 203 7.3E-83 T 22-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS16095 9cd8b4223dfcaabd652e178af881842d 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 8.3E-183 T 22-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.8E-27 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 PANTHER PTHR19376:SF32 1177 1262 0.0 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 PANTHER PTHR19376 1177 1262 0.0 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 PANTHER PTHR19376 961 1157 0.0 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 PANTHER PTHR19376 1303 1395 0.0 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 PANTHER PTHR19376 570 943 0.0 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 6.8E-90 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 Hamap MF_01323 DNA-directed RNA polymerase subunit gamma [rpoC1]. 13 588 32.24 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 2.0E-26 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 SUPERFAMILY SSF64484 1133 1363 0.0 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 SUPERFAMILY SSF64484 16 944 0.0 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.2E-18 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 15 1377 10.418 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 6.9E-77 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 PANTHER PTHR19376:SF32 961 1157 0.0 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 PANTHER PTHR19376:SF32 1303 1395 0.0 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 PANTHER PTHR19376:SF32 4 551 0.0 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 Gene3D G3DSA:2.40.50.100 1156 1209 1.5E-5 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 SMART SM00663 235 514 1.1E-184 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 PANTHER PTHR19376 4 551 0.0 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 Gene3D G3DSA:2.40.40.20 417 489 2.8E-37 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 Gene3D G3DSA:2.40.40.20 349 376 2.8E-37 T 22-04-2016 APT61_RS21190 35cf11d78cf649f14f64dadee3f27822 1407 PANTHER PTHR19376:SF32 570 943 0.0 T 22-04-2016 APT61_RS11955 98d36a9226f2c6226138173f20456822 125 PANTHER PTHR11803 10 123 1.1E-20 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APT61_RS11955 98d36a9226f2c6226138173f20456822 125 Pfam PF01042 Endoribonuclease L-PSP 16 122 1.5E-19 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APT61_RS11955 98d36a9226f2c6226138173f20456822 125 SUPERFAMILY SSF55298 4 123 1.88E-24 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APT61_RS11955 98d36a9226f2c6226138173f20456822 125 Gene3D G3DSA:3.30.1330.40 3 122 2.2E-27 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 SUPERFAMILY SSF53955 195 401 4.78E-65 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 PANTHER PTHR32282 182 827 0.0 T 22-04-2016 APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 PIRSF PIRSF002799 25 838 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 Pfam PF00905 Penicillin binding protein transpeptidase domain 471 711 3.0E-27 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 Gene3D G3DSA:3.30.2060.10 109 198 8.8E-35 T 22-04-2016 APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 77 3.9E-26 T 22-04-2016 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 Pfam PF14814 Bifunctional transglycosylase second domain 111 195 4.3E-27 T 22-04-2016 IPR028166 Bifunctional transglycosylase second domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 PANTHER PTHR32282:SF11 182 827 0.0 T 22-04-2016 APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 66 791 0.0 T 22-04-2016 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00500+2.4.1.12|KEGG: 00550+3.4.-.-+2.4.1.129|KEGG: 00780+3.4.-.-|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 SUPERFAMILY SSF56601 360 382 4.1E-108 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 SUPERFAMILY SSF56601 410 787 4.1E-108 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 Gene3D G3DSA:3.40.710.10 380 791 7.1E-113 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 Pfam PF00912 Transglycosylase 207 378 2.8E-54 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 Gene3D G3DSA:1.20.5.100 53 94 2.5E-24 T 22-04-2016 APT61_RS18350 1a995c47838afa59c1b73acd24fbbca4 840 Gene3D G3DSA:1.10.3810.10 204 379 8.3E-63 T 22-04-2016 APT61_RS17285 85fcf423484fc79c614dd164bbc95ef9 231 PIRSF PIRSF006293 1 226 5.4E-87 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APT61_RS17285 85fcf423484fc79c614dd164bbc95ef9 231 SUPERFAMILY SSF52402 1 213 1.46E-70 T 22-04-2016 APT61_RS17285 85fcf423484fc79c614dd164bbc95ef9 231 PANTHER PTHR11587 1 213 1.6E-106 T 22-04-2016 APT61_RS17285 85fcf423484fc79c614dd164bbc95ef9 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 219 52.514 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APT61_RS17285 85fcf423484fc79c614dd164bbc95ef9 231 PANTHER PTHR11587:SF3 1 213 1.6E-106 T 22-04-2016 APT61_RS17285 85fcf423484fc79c614dd164bbc95ef9 231 Gene3D G3DSA:3.40.50.620 1 214 2.0E-85 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS17285 85fcf423484fc79c614dd164bbc95ef9 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 206 4.2E-88 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APT61_RS17285 85fcf423484fc79c614dd164bbc95ef9 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 2.3E-85 T 22-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 APT61_RS16025 2c121ed205b6f6272bd49c9337d55174 173 SUPERFAMILY SSF103088 60 172 5.36E-34 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS16025 2c121ed205b6f6272bd49c9337d55174 173 Pfam PF00691 OmpA family 72 167 2.6E-21 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS16025 2c121ed205b6f6272bd49c9337d55174 173 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 71 173 3.9E-46 T 22-04-2016 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 APT61_RS16025 2c121ed205b6f6272bd49c9337d55174 173 ProSitePatterns PS01068 OmpA-like domain. 105 149 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 APT61_RS16025 2c121ed205b6f6272bd49c9337d55174 173 PRINTS PR01021 OMPA domain signature 103 118 1.2E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS16025 2c121ed205b6f6272bd49c9337d55174 173 PRINTS PR01021 OMPA domain signature 118 134 1.2E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS16025 2c121ed205b6f6272bd49c9337d55174 173 PRINTS PR01021 OMPA domain signature 73 95 1.2E-16 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS16025 2c121ed205b6f6272bd49c9337d55174 173 PANTHER PTHR30128:SF18 37 173 1.9E-69 T 22-04-2016 APT61_RS16025 2c121ed205b6f6272bd49c9337d55174 173 Gene3D G3DSA:3.30.1330.60 68 172 3.2E-34 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS16025 2c121ed205b6f6272bd49c9337d55174 173 PANTHER PTHR30128 37 173 1.9E-69 T 22-04-2016 APT61_RS10900 15d402bcffce6764edb16ff58ad8ff6b 239 Gene3D G3DSA:2.120.10.10 62 124 9.1E-4 T 22-04-2016 IPR011040 Sialidases APT61_RS00620 90f01277f304ff5da6f0ffb3201b687b 367 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 5.7E-65 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APT61_RS00620 90f01277f304ff5da6f0ffb3201b687b 367 Gene3D G3DSA:3.40.50.1970 2 158 5.0E-44 T 22-04-2016 APT61_RS00620 90f01277f304ff5da6f0ffb3201b687b 367 PANTHER PTHR11496:SF57 1 361 1.7E-201 T 22-04-2016 APT61_RS00620 90f01277f304ff5da6f0ffb3201b687b 367 PIRSF PIRSF000112 1 360 2.0E-96 T 22-04-2016 APT61_RS00620 90f01277f304ff5da6f0ffb3201b687b 367 Gene3D G3DSA:1.20.1090.10 160 364 1.9E-70 T 22-04-2016 APT61_RS00620 90f01277f304ff5da6f0ffb3201b687b 367 SUPERFAMILY SSF56796 3 355 1.83E-88 T 22-04-2016 APT61_RS00620 90f01277f304ff5da6f0ffb3201b687b 367 PANTHER PTHR11496 1 361 1.7E-201 T 22-04-2016 APT61_RS00620 90f01277f304ff5da6f0ffb3201b687b 367 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APT61_RS00620 90f01277f304ff5da6f0ffb3201b687b 367 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APT61_RS11040 82b94c1917929bdb53c7b960b4c40479 239 PANTHER PTHR24220:SF568 6 236 5.4E-102 T 22-04-2016 APT61_RS11040 82b94c1917929bdb53c7b960b4c40479 239 Gene3D G3DSA:3.40.50.300 2 230 2.4E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11040 82b94c1917929bdb53c7b960b4c40479 239 SMART SM00382 29 213 5.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS11040 82b94c1917929bdb53c7b960b4c40479 239 PANTHER PTHR24220 6 236 5.4E-102 T 22-04-2016 APT61_RS11040 82b94c1917929bdb53c7b960b4c40479 239 Pfam PF00005 ABC transporter 21 164 4.4E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS11040 82b94c1917929bdb53c7b960b4c40479 239 SUPERFAMILY SSF52540 4 235 7.87E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11040 82b94c1917929bdb53c7b960b4c40479 239 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 27 43 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS13200 16299f6366e7e7edb217ec1fe600db34 511 SUPERFAMILY SSF161098 312 498 3.14E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS13200 16299f6366e7e7edb217ec1fe600db34 511 SUPERFAMILY SSF161098 10 254 2.94E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS13200 16299f6366e7e7edb217ec1fe600db34 511 PANTHER PTHR30183 1 509 2.2E-160 T 22-04-2016 APT61_RS13200 16299f6366e7e7edb217ec1fe600db34 511 Gene3D G3DSA:1.10.3720.10 346 500 2.3E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS13200 16299f6366e7e7edb217ec1fe600db34 511 Gene3D G3DSA:1.10.3720.10 12 258 4.2E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS13200 16299f6366e7e7edb217ec1fe600db34 511 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 256 5.8E-8 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS13200 16299f6366e7e7edb217ec1fe600db34 511 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 346 499 4.7E-6 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS13200 16299f6366e7e7edb217ec1fe600db34 511 PANTHER PTHR30183:SF6 1 509 2.2E-160 T 22-04-2016 APT61_RS17695 f023da7c26751ff14e86de78b15b4d4b 348 Pfam PF00005 ABC transporter 23 164 2.6E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS17695 f023da7c26751ff14e86de78b15b4d4b 348 SUPERFAMILY SSF50331 240 344 6.56E-15 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APT61_RS17695 f023da7c26751ff14e86de78b15b4d4b 348 SUPERFAMILY SSF52540 7 245 6.98E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17695 f023da7c26751ff14e86de78b15b4d4b 348 SMART SM00382 31 214 5.5E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS17695 f023da7c26751ff14e86de78b15b4d4b 348 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS17695 f023da7c26751ff14e86de78b15b4d4b 348 Gene3D G3DSA:3.40.50.300 4 237 3.1E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17695 f023da7c26751ff14e86de78b15b4d4b 348 Pfam PF08402 TOBE domain 273 344 1.1E-10 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APT61_RS17695 f023da7c26751ff14e86de78b15b4d4b 348 PANTHER PTHR24220:SF536 8 336 5.8E-240 T 22-04-2016 APT61_RS17695 f023da7c26751ff14e86de78b15b4d4b 348 PANTHER PTHR24220 8 336 5.8E-240 T 22-04-2016 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 164 190 2.1E-35 T 22-04-2016 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 267 321 2.1E-35 T 22-04-2016 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 153 340 3.69E-50 T 22-04-2016 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 22-04-2016 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PANTHER PTHR19375:SF117 9 336 2.7E-191 T 22-04-2016 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.90.640.10 191 263 8.7E-31 T 22-04-2016 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.6E-171 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PANTHER PTHR19375 9 336 2.7E-191 T 22-04-2016 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 9 163 1.8E-46 T 22-04-2016 APT61_RS02405 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Pfam PF06723 MreB/Mbl protein 11 338 1.4E-150 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 APT61_RS05475 c7eaecf44e865d06eb73191e0a06aeda 300 SUPERFAMILY SSF53850 88 297 6.7E-39 T 22-04-2016 APT61_RS05475 c7eaecf44e865d06eb73191e0a06aeda 300 PANTHER PTHR30537 1 288 5.4E-128 T 22-04-2016 APT61_RS05475 c7eaecf44e865d06eb73191e0a06aeda 300 Gene3D G3DSA:3.40.190.10 174 261 4.0E-20 T 22-04-2016 APT61_RS05475 c7eaecf44e865d06eb73191e0a06aeda 300 Pfam PF03466 LysR substrate binding domain 88 292 2.2E-36 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS05475 c7eaecf44e865d06eb73191e0a06aeda 300 PANTHER PTHR30537:SF21 1 288 5.4E-128 T 22-04-2016 APT61_RS05475 c7eaecf44e865d06eb73191e0a06aeda 300 SUPERFAMILY SSF46785 2 111 1.69E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05475 c7eaecf44e865d06eb73191e0a06aeda 300 Gene3D G3DSA:1.10.10.10 1 82 8.0E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05475 c7eaecf44e865d06eb73191e0a06aeda 300 Gene3D G3DSA:3.40.190.10 89 173 3.5E-6 T 22-04-2016 APT61_RS05475 c7eaecf44e865d06eb73191e0a06aeda 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.5E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS09855 b5377d1cf1ff29d04fdfc395dee9aeb6 322 Pfam PF03781 Sulfatase-modifying factor enzyme 1 47 259 1.5E-32 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme APT61_RS09855 b5377d1cf1ff29d04fdfc395dee9aeb6 322 PANTHER PTHR23150 47 250 4.7E-21 T 22-04-2016 APT61_RS09855 b5377d1cf1ff29d04fdfc395dee9aeb6 322 Gene3D G3DSA:3.90.1580.10 42 298 2.8E-45 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme APT61_RS09855 b5377d1cf1ff29d04fdfc395dee9aeb6 322 SUPERFAMILY SSF56436 46 269 3.3E-44 T 22-04-2016 IPR016187 C-type lectin fold APT61_RS19240 bcf38470a7470443c3ece7eb6cc5de07 152 Gene3D G3DSA:3.90.960.10 1 151 1.1E-47 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APT61_RS19240 bcf38470a7470443c3ece7eb6cc5de07 152 Pfam PF04073 Aminoacyl-tRNA editing domain 25 139 9.5E-28 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APT61_RS19240 bcf38470a7470443c3ece7eb6cc5de07 152 PANTHER PTHR30411:SF6 3 151 2.0E-73 T 22-04-2016 APT61_RS19240 bcf38470a7470443c3ece7eb6cc5de07 152 SUPERFAMILY SSF55826 4 151 1.03E-39 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APT61_RS19240 bcf38470a7470443c3ece7eb6cc5de07 152 PANTHER PTHR30411 3 151 2.0E-73 T 22-04-2016 APT61_RS08610 b4ef10ea919dd0672485ffa6b288290f 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 3.2E-29 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APT61_RS08610 b4ef10ea919dd0672485ffa6b288290f 289 PANTHER PTHR30514 1 271 1.8E-193 T 22-04-2016 APT61_RS08610 b4ef10ea919dd0672485ffa6b288290f 289 Gene3D G3DSA:3.40.50.10490 97 270 9.9E-40 T 22-04-2016 APT61_RS08610 b4ef10ea919dd0672485ffa6b288290f 289 Pfam PF01380 SIS domain 124 252 8.7E-28 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APT61_RS08610 b4ef10ea919dd0672485ffa6b288290f 289 PANTHER PTHR30514:SF7 1 271 1.8E-193 T 22-04-2016 APT61_RS08610 b4ef10ea919dd0672485ffa6b288290f 289 SUPERFAMILY SSF53697 94 277 5.82E-43 T 22-04-2016 APT61_RS08610 b4ef10ea919dd0672485ffa6b288290f 289 Gene3D G3DSA:1.10.10.10 1 80 9.1E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS08610 b4ef10ea919dd0672485ffa6b288290f 289 SUPERFAMILY SSF46689 1 80 1.63E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS10050 5c377249b68ae392f11445aa4512f5a8 255 PANTHER PTHR11941 1 252 1.3E-100 T 22-04-2016 APT61_RS10050 5c377249b68ae392f11445aa4512f5a8 255 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 96 116 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 APT61_RS10050 5c377249b68ae392f11445aa4512f5a8 255 PANTHER PTHR11941:SF54 1 252 1.3E-100 T 22-04-2016 APT61_RS10050 5c377249b68ae392f11445aa4512f5a8 255 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 254 6.6E-75 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APT61_RS10050 5c377249b68ae392f11445aa4512f5a8 255 SUPERFAMILY SSF52096 2 255 1.43E-84 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS10050 5c377249b68ae392f11445aa4512f5a8 255 Gene3D G3DSA:3.90.226.10 2 253 2.7E-89 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS00995 3942af4ce8d356c21864e8904992d1a2 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 2.0E-113 T 22-04-2016 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 APT61_RS00995 3942af4ce8d356c21864e8904992d1a2 316 PANTHER PTHR21535:SF37 6 316 3.3E-168 T 22-04-2016 APT61_RS00995 3942af4ce8d356c21864e8904992d1a2 316 Pfam PF01544 CorA-like Mg2+ transporter protein 26 312 1.9E-56 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 APT61_RS00995 3942af4ce8d356c21864e8904992d1a2 316 SUPERFAMILY SSF144083 251 313 1.57E-20 T 22-04-2016 APT61_RS00995 3942af4ce8d356c21864e8904992d1a2 316 PANTHER PTHR21535 6 316 3.3E-168 T 22-04-2016 APT61_RS00995 3942af4ce8d356c21864e8904992d1a2 316 Gene3D G3DSA:1.20.58.340 240 316 2.9E-28 T 22-04-2016 APT61_RS00995 3942af4ce8d356c21864e8904992d1a2 316 SUPERFAMILY SSF143865 1 255 2.22E-37 T 22-04-2016 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 Gene3D G3DSA:3.30.930.10 242 529 1.9E-122 T 22-04-2016 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 Pfam PF03129 Anticodon binding domain 541 630 1.5E-23 T 22-04-2016 IPR004154 Anticodon-binding APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 SMART SM00863 170 219 7.9E-19 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 SUPERFAMILY SSF81271 3 61 2.06E-15 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 6.3E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 6.3E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 6.3E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 6.3E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 6.3E-55 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 Gene3D G3DSA:3.30.980.10 65 129 2.7E-42 T 22-04-2016 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 Gene3D G3DSA:3.30.980.10 188 224 2.7E-42 T 22-04-2016 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 1.4E-50 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 Gene3D G3DSA:3.10.20.30 1 64 8.5E-23 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 Pfam PF02824 TGS domain 4 61 1.0E-11 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 SUPERFAMILY SSF52954 530 636 3.78E-34 T 22-04-2016 IPR004154 Anticodon-binding APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 PANTHER PTHR11451 1 642 0.0 T 22-04-2016 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 PANTHER PTHR11451:SF31 1 642 0.0 T 22-04-2016 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 219 9.7E-14 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 Gene3D G3DSA:3.30.54.20 131 187 6.0E-20 T 22-04-2016 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 SUPERFAMILY SSF55681 243 525 3.73E-97 T 22-04-2016 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 Gene3D G3DSA:3.40.50.800 532 640 5.4E-39 T 22-04-2016 IPR004154 Anticodon-binding APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.202 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 2.7E-248 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 APT61_RS13040 fe42961546bd08a8335b7a750d3ceca4 642 SUPERFAMILY SSF55186 63 241 3.01E-65 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APT61_RS17495 70154bc9d2314f77e171abcd028e335f 605 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 105 2.0E-7 T 22-04-2016 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 APT61_RS17495 70154bc9d2314f77e171abcd028e335f 605 SMART SM00642 127 521 3.9E-88 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS17495 70154bc9d2314f77e171abcd028e335f 605 Gene3D G3DSA:2.60.40.10 35 110 2.2E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS17495 70154bc9d2314f77e171abcd028e335f 605 PANTHER PTHR10357:SF144 33 138 6.2E-235 T 22-04-2016 APT61_RS17495 70154bc9d2314f77e171abcd028e335f 605 PANTHER PTHR10357:SF144 174 579 6.2E-235 T 22-04-2016 APT61_RS17495 70154bc9d2314f77e171abcd028e335f 605 Pfam PF00128 Alpha amylase, catalytic domain 177 493 3.1E-83 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS17495 70154bc9d2314f77e171abcd028e335f 605 SUPERFAMILY SSF81296 11 103 6.53E-7 T 22-04-2016 IPR014756 Immunoglobulin E-set APT61_RS17495 70154bc9d2314f77e171abcd028e335f 605 SUPERFAMILY SSF51445 117 530 6.34E-89 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS17495 70154bc9d2314f77e171abcd028e335f 605 SUPERFAMILY SSF51011 530 602 2.42E-9 T 22-04-2016 APT61_RS17495 70154bc9d2314f77e171abcd028e335f 605 Gene3D G3DSA:2.60.40.1180 525 570 2.4E-9 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta APT61_RS17495 70154bc9d2314f77e171abcd028e335f 605 Gene3D G3DSA:3.20.20.80 117 523 1.7E-106 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS17495 70154bc9d2314f77e171abcd028e335f 605 PIRSF PIRSF036918 1 603 3.1E-232 T 22-04-2016 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 APT61_RS17495 70154bc9d2314f77e171abcd028e335f 605 PANTHER PTHR10357 33 138 6.2E-235 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS17495 70154bc9d2314f77e171abcd028e335f 605 PANTHER PTHR10357 174 579 6.2E-235 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 Gene3D G3DSA:3.40.1060.10 494 656 7.5E-88 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 SUPERFAMILY SSF53732 354 833 1.19E-148 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 PIRSF PIRSF036687 1 833 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 2 828 0.0 T 22-04-2016 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 SUPERFAMILY SSF74778 2 134 7.19E-57 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 PANTHER PTHR11670 279 834 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 Gene3D G3DSA:3.30.499.10 377 493 1.4E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 Gene3D G3DSA:3.20.19.10 136 335 9.4E-94 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 Pfam PF06434 Aconitate hydratase 2 N-terminus 142 356 2.2E-97 T 22-04-2016 IPR015929 Aconitase B, N-terminal GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 ProSitePatterns PS00450 Aconitase family signature 1. 676 693 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 SUPERFAMILY SSF52016 137 345 3.53E-72 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 Gene3D G3DSA:3.30.499.10 658 833 1.9E-55 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 Pfam PF11791 Aconitate B N-terminal domain 2 130 1.2E-55 T 22-04-2016 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747|UniPathway: UPA00223|UniPathway: UPA00946 APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 ProSitePatterns PS01244 Aconitase family signature 2. 735 748 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 PANTHER PTHR11670:SF39 279 834 0.0 T 22-04-2016 APT61_RS18465 ad1c8ff5fce4a71e82964a555655a1c1 839 Pfam PF00330 Aconitase family (aconitate hydratase) 446 792 1.8E-38 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS02295 a05f8638f10f45a27bbc6bc0fb25a30c 252 PANTHER PTHR24220:SF474 14 251 6.2E-173 T 22-04-2016 APT61_RS02295 a05f8638f10f45a27bbc6bc0fb25a30c 252 SUPERFAMILY SSF52540 12 246 3.38E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02295 a05f8638f10f45a27bbc6bc0fb25a30c 252 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS02295 a05f8638f10f45a27bbc6bc0fb25a30c 252 Pfam PF00005 ABC transporter 28 176 2.5E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS02295 a05f8638f10f45a27bbc6bc0fb25a30c 252 PIRSF PIRSF039085 9 252 7.0E-109 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APT61_RS02295 a05f8638f10f45a27bbc6bc0fb25a30c 252 PANTHER PTHR24220 14 251 6.2E-173 T 22-04-2016 APT61_RS02295 a05f8638f10f45a27bbc6bc0fb25a30c 252 SMART SM00382 37 224 5.7E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS02295 a05f8638f10f45a27bbc6bc0fb25a30c 252 Gene3D G3DSA:3.40.50.300 11 248 5.1E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21705 580ab9e6cc0e5299a82e976e652cb9db 213 Pfam PF00156 Phosphoribosyl transferase domain 48 159 3.7E-11 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APT61_RS21705 580ab9e6cc0e5299a82e976e652cb9db 213 PANTHER PTHR19278:SF36 1 213 1.3E-146 T 22-04-2016 APT61_RS21705 580ab9e6cc0e5299a82e976e652cb9db 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 35.838 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS21705 580ab9e6cc0e5299a82e976e652cb9db 213 Gene3D G3DSA:3.40.50.2020 7 212 1.2E-81 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS21705 580ab9e6cc0e5299a82e976e652cb9db 213 PANTHER PTHR19278 1 213 1.3E-146 T 22-04-2016 APT61_RS21705 580ab9e6cc0e5299a82e976e652cb9db 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 2.7E-70 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS21705 580ab9e6cc0e5299a82e976e652cb9db 213 SUPERFAMILY SSF53271 2 208 1.11E-49 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 680 41.343 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 SUPERFAMILY SSF81665 619 663 9.55E-12 T 22-04-2016 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 SUPERFAMILY SSF81665 30 103 9.55E-12 T 22-04-2016 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 SUPERFAMILY SSF81665 208 299 9.55E-12 T 22-04-2016 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 307 313 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 PANTHER PTHR24093:SF49 625 676 0.0 T 22-04-2016 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 PANTHER PTHR24093:SF49 9 587 0.0 T 22-04-2016 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 Gene3D G3DSA:2.70.150.10 49 208 1.4E-23 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 71 330 2.9E-37 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 372 604 6.4E-48 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 2 677 0.0 T 22-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 Gene3D G3DSA:3.40.50.1000 443 563 3.4E-35 T 22-04-2016 IPR023214 HAD-like domain APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 SUPERFAMILY SSF56784 293 317 3.02E-37 T 22-04-2016 IPR023214 HAD-like domain APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 SUPERFAMILY SSF56784 372 404 3.02E-37 T 22-04-2016 IPR023214 HAD-like domain APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 SUPERFAMILY SSF56784 435 559 3.02E-37 T 22-04-2016 IPR023214 HAD-like domain APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 PANTHER PTHR24093 625 676 0.0 T 22-04-2016 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 PANTHER PTHR24093 9 587 0.0 T 22-04-2016 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 3.7E-24 T 22-04-2016 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 3.7E-24 T 22-04-2016 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 3.7E-24 T 22-04-2016 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 3.7E-24 T 22-04-2016 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.7E-24 T 22-04-2016 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 Pfam PF00122 E1-E2 ATPase 72 296 2.4E-41 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 530 1.3E-36 T 22-04-2016 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 SUPERFAMILY SSF81653 119 207 1.83E-20 T 22-04-2016 APT61_RS16195 b189146136d68cb868e79ed90cf94876 682 Gene3D G3DSA:3.40.1110.10 316 442 4.4E-53 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APT61_RS10965 377c9e6fec5d796fbfcc299c5e845762 322 Pfam PF13343 Bacterial extracellular solute-binding protein 74 298 7.0E-33 T 22-04-2016 APT61_RS10965 377c9e6fec5d796fbfcc299c5e845762 322 Gene3D G3DSA:3.40.190.10 124 257 1.9E-28 T 22-04-2016 APT61_RS10965 377c9e6fec5d796fbfcc299c5e845762 322 PANTHER PTHR30006:SF6 12 321 5.4E-52 T 22-04-2016 APT61_RS10965 377c9e6fec5d796fbfcc299c5e845762 322 SUPERFAMILY SSF53850 25 302 3.22E-62 T 22-04-2016 APT61_RS10965 377c9e6fec5d796fbfcc299c5e845762 322 PANTHER PTHR30006 12 321 5.4E-52 T 22-04-2016 APT61_RS10965 377c9e6fec5d796fbfcc299c5e845762 322 Gene3D G3DSA:3.40.190.10 258 293 2.5E-39 T 22-04-2016 APT61_RS10965 377c9e6fec5d796fbfcc299c5e845762 322 Gene3D G3DSA:3.40.190.10 10 122 2.5E-39 T 22-04-2016 APT61_RS10965 377c9e6fec5d796fbfcc299c5e845762 322 PIRSF PIRSF002825 2 311 1.6E-52 T 22-04-2016 IPR026045 Ferric binding protein APT61_RS21605 fc15aa7cd95355948acef734385d69b7 310 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 58.318 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 APT61_RS21605 fc15aa7cd95355948acef734385d69b7 310 PANTHER PTHR10366 1 308 7.9E-123 T 22-04-2016 APT61_RS21605 fc15aa7cd95355948acef734385d69b7 310 Gene3D G3DSA:3.90.25.10 172 291 1.0E-35 T 22-04-2016 APT61_RS21605 fc15aa7cd95355948acef734385d69b7 310 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 4.4E-136 T 22-04-2016 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20|UniPathway: UPA00356 APT61_RS21605 fc15aa7cd95355948acef734385d69b7 310 PANTHER PTHR10366:SF469 1 308 7.9E-123 T 22-04-2016 APT61_RS21605 fc15aa7cd95355948acef734385d69b7 310 SUPERFAMILY SSF51735 1 306 4.59E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS21605 fc15aa7cd95355948acef734385d69b7 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 4.3E-44 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APT61_RS21605 fc15aa7cd95355948acef734385d69b7 310 Gene3D G3DSA:3.40.50.720 2 171 5.0E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 PANTHER PTHR11374:SF4 1 420 7.6E-195 T 22-04-2016 APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 Gene3D G3DSA:3.40.50.720 237 419 2.3E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 PIRSF PIRSF500136 1 420 1.6E-149 T 22-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 3.1E-121 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 188 1.8E-59 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 SUPERFAMILY SSF52413 310 419 1.16E-25 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 PIRSF PIRSF000124 4 419 1.3E-77 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 1.2E-26 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 PANTHER PTHR11374 1 420 7.6E-195 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 SUPERFAMILY SSF48179 206 299 1.04E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 SUPERFAMILY SSF51735 5 198 2.3E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 73.695 T 22-04-2016 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335|UniPathway: UPA00566 APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 SMART SM00984 324 420 5.1E-25 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 Gene3D G3DSA:3.40.50.720 3 227 1.2E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00865 b0c5d2a4007b0b2c55e6084814e9fb38 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 1.1E-18 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APT61_RS21330 f956ad322e3f41e05ae087ffe620b59a 220 SUPERFAMILY SSF103088 103 218 6.93E-38 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS21330 f956ad322e3f41e05ae087ffe620b59a 220 Pfam PF00691 OmpA family 115 210 7.0E-23 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS21330 f956ad322e3f41e05ae087ffe620b59a 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 132 158 4.2E-6 T 22-04-2016 APT61_RS21330 f956ad322e3f41e05ae087ffe620b59a 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 4.2E-6 T 22-04-2016 APT61_RS21330 f956ad322e3f41e05ae087ffe620b59a 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 4.2E-6 T 22-04-2016 APT61_RS21330 f956ad322e3f41e05ae087ffe620b59a 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 4.2E-6 T 22-04-2016 APT61_RS21330 f956ad322e3f41e05ae087ffe620b59a 220 Gene3D G3DSA:3.30.1330.60 95 216 9.4E-40 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS21330 f956ad322e3f41e05ae087ffe620b59a 220 Pfam PF13488 Glycine zipper 37 85 1.0E-10 T 22-04-2016 APT61_RS21330 f956ad322e3f41e05ae087ffe620b59a 220 PANTHER PTHR30128 15 220 1.9E-72 T 22-04-2016 APT61_RS21330 f956ad322e3f41e05ae087ffe620b59a 220 PRINTS PR01021 OMPA domain signature 161 177 5.3E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS21330 f956ad322e3f41e05ae087ffe620b59a 220 PRINTS PR01021 OMPA domain signature 116 138 5.3E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS21330 f956ad322e3f41e05ae087ffe620b59a 220 PRINTS PR01021 OMPA domain signature 146 161 5.3E-15 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS21330 f956ad322e3f41e05ae087ffe620b59a 220 ProSitePatterns PS01068 OmpA-like domain. 148 192 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 PANTHER PTHR34501:SF6 2 357 1.0E-167 T 22-04-2016 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 SUPERFAMILY SSF56935 22 357 1.1E-69 T 22-04-2016 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 310 327 1.1E-14 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 55 66 1.1E-14 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 154 165 1.1E-14 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 226 238 1.1E-14 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 97 107 1.1E-14 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 PANTHER PTHR34501 2 357 1.0E-167 T 22-04-2016 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 Pfam PF00267 Gram-negative porin 27 357 3.6E-124 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 Gene3D G3DSA:2.40.160.10 22 357 1.7E-90 T 22-04-2016 IPR023614 Porin domain APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 1.1E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 PRINTS PR00183 E.coli/Salmonella-type porin signature 152 174 1.1E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 PRINTS PR00183 E.coli/Salmonella-type porin signature 261 280 1.1E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 PRINTS PR00183 E.coli/Salmonella-type porin signature 232 249 1.1E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 PRINTS PR00183 E.coli/Salmonella-type porin signature 54 72 1.1E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS07980 15f86fb55095b8008667e2cea6177ac3 357 PRINTS PR00183 E.coli/Salmonella-type porin signature 97 119 1.1E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS18045 572f4a3b7ca2399469e94a41b2397153 455 Gene3D G3DSA:1.10.530.10 100 260 3.4E-48 T 22-04-2016 APT61_RS18045 572f4a3b7ca2399469e94a41b2397153 455 SUPERFAMILY SSF53955 102 253 4.74E-42 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS18045 572f4a3b7ca2399469e94a41b2397153 455 Pfam PF01464 Transglycosylase SLT domain 105 217 3.0E-28 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 APT61_RS18045 572f4a3b7ca2399469e94a41b2397153 455 SUPERFAMILY SSF54106 403 446 8.11E-11 T 22-04-2016 IPR018392 LysM domain APT61_RS18045 572f4a3b7ca2399469e94a41b2397153 455 PANTHER PTHR21666:SF206 13 446 5.2E-207 T 22-04-2016 APT61_RS18045 572f4a3b7ca2399469e94a41b2397153 455 SUPERFAMILY SSF54106 344 387 1.83E-10 T 22-04-2016 IPR018392 LysM domain APT61_RS18045 572f4a3b7ca2399469e94a41b2397153 455 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 124 152 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APT61_RS18045 572f4a3b7ca2399469e94a41b2397153 455 SMART SM00257 404 446 6.2E-14 T 22-04-2016 IPR018392 LysM domain APT61_RS18045 572f4a3b7ca2399469e94a41b2397153 455 SMART SM00257 345 388 3.8E-14 T 22-04-2016 IPR018392 LysM domain APT61_RS18045 572f4a3b7ca2399469e94a41b2397153 455 PANTHER PTHR21666 13 446 5.2E-207 T 22-04-2016 APT61_RS18045 572f4a3b7ca2399469e94a41b2397153 455 Gene3D G3DSA:3.10.350.10 402 446 8.2E-18 T 22-04-2016 IPR018392 LysM domain APT61_RS18045 572f4a3b7ca2399469e94a41b2397153 455 Gene3D G3DSA:3.10.350.10 343 387 2.4E-17 T 22-04-2016 IPR018392 LysM domain APT61_RS18045 572f4a3b7ca2399469e94a41b2397153 455 Pfam PF01476 LysM domain 346 387 2.2E-12 T 22-04-2016 IPR018392 LysM domain APT61_RS18045 572f4a3b7ca2399469e94a41b2397153 455 Pfam PF01476 LysM domain 405 444 5.0E-10 T 22-04-2016 IPR018392 LysM domain APT61_RS17840 2f7037bb808019ecbf54c211d76d224b 488 PANTHER PTHR30108 4 484 2.8E-99 T 22-04-2016 APT61_RS17840 2f7037bb808019ecbf54c211d76d224b 488 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 428 2.3E-103 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 APT61_RS17840 2f7037bb808019ecbf54c211d76d224b 488 SUPERFAMILY SSF50475 4 315 9.81E-80 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS17840 2f7037bb808019ecbf54c211d76d224b 488 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 7 437 4.6E-86 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 APT61_RS17840 2f7037bb808019ecbf54c211d76d224b 488 Gene3D G3DSA:3.40.1670.10 334 456 2.5E-14 T 22-04-2016 APT61_RS17840 2f7037bb808019ecbf54c211d76d224b 488 Hamap MF_01983 UbiD-like decarboxylase. 3 488 41.816 T 22-04-2016 IPR032903 UbiD-like decarboxylase/ferulic acid decarboxylase 1 APT61_RS17840 2f7037bb808019ecbf54c211d76d224b 488 PANTHER PTHR30108:SF1 4 484 2.8E-99 T 22-04-2016 APT61_RS17840 2f7037bb808019ecbf54c211d76d224b 488 SUPERFAMILY SSF143968 317 484 4.71E-25 T 22-04-2016 APT61_RS01920 d9a6d181c81298db303ddb2359981645 551 Pfam PF16957 Malonate decarboxylase, alpha subunit, transporter 10 551 1.1E-296 T 22-04-2016 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 APT61_RS01920 d9a6d181c81298db303ddb2359981645 551 SUPERFAMILY SSF100950 40 280 6.42E-36 T 22-04-2016 APT61_RS01920 d9a6d181c81298db303ddb2359981645 551 PANTHER PTHR13707 66 273 7.5E-89 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APT61_RS01920 d9a6d181c81298db303ddb2359981645 551 PANTHER PTHR13707:SF27 66 273 7.5E-89 T 22-04-2016 APT61_RS01920 d9a6d181c81298db303ddb2359981645 551 SUPERFAMILY SSF100950 232 489 2.62E-23 T 22-04-2016 APT61_RS01920 d9a6d181c81298db303ddb2359981645 551 Gene3D G3DSA:3.40.1080.10 40 228 1.5E-11 T 22-04-2016 APT61_RS01920 d9a6d181c81298db303ddb2359981645 551 TIGRFAM TIGR01110 mdcA: malonate decarboxylase, alpha subunit 11 551 0.0 T 22-04-2016 IPR005777 Acetyl-S-ACP:malonate ACP transferase MetaCyc: PWY-5794|MetaCyc: PWY-6060 APT61_RS15935 c39c4f2bd1ad5114ba47563e11383236 321 PANTHER PTHR10366:SF39 1 319 9.7E-132 T 22-04-2016 APT61_RS15935 c39c4f2bd1ad5114ba47563e11383236 321 PANTHER PTHR10366 1 319 9.7E-132 T 22-04-2016 APT61_RS15935 c39c4f2bd1ad5114ba47563e11383236 321 SUPERFAMILY SSF51735 2 319 4.49E-88 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS15935 c39c4f2bd1ad5114ba47563e11383236 321 Gene3D G3DSA:3.90.25.10 163 215 2.5E-50 T 22-04-2016 APT61_RS15935 c39c4f2bd1ad5114ba47563e11383236 321 Gene3D G3DSA:3.90.25.10 247 320 2.5E-50 T 22-04-2016 APT61_RS15935 c39c4f2bd1ad5114ba47563e11383236 321 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 318 6.3E-137 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 APT61_RS15935 c39c4f2bd1ad5114ba47563e11383236 321 Pfam PF16363 GDP-mannose 4,6 dehydratase 2 308 9.4E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS15935 c39c4f2bd1ad5114ba47563e11383236 321 Gene3D G3DSA:3.40.50.720 2 162 6.7E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10830 b9c7952d71c0d858b25ffb288b5175d5 373 PANTHER PTHR11014 1 373 2.4E-152 T 22-04-2016 APT61_RS10830 b9c7952d71c0d858b25ffb288b5175d5 373 Gene3D G3DSA:3.40.630.10 288 371 1.5E-88 T 22-04-2016 APT61_RS10830 b9c7952d71c0d858b25ffb288b5175d5 373 Gene3D G3DSA:3.40.630.10 3 168 1.5E-88 T 22-04-2016 APT61_RS10830 b9c7952d71c0d858b25ffb288b5175d5 373 Pfam PF01546 Peptidase family M20/M25/M40 63 367 3.6E-30 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APT61_RS10830 b9c7952d71c0d858b25ffb288b5175d5 373 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 7 356 1.3E-111 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 APT61_RS10830 b9c7952d71c0d858b25ffb288b5175d5 373 SUPERFAMILY SSF55031 174 281 2.88E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS10830 b9c7952d71c0d858b25ffb288b5175d5 373 Pfam PF07687 Peptidase dimerisation domain 176 267 3.0E-11 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS10830 b9c7952d71c0d858b25ffb288b5175d5 373 PANTHER PTHR11014:SF107 1 373 2.4E-152 T 22-04-2016 APT61_RS10830 b9c7952d71c0d858b25ffb288b5175d5 373 PIRSF PIRSF005962 1 373 2.1E-117 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 APT61_RS10830 b9c7952d71c0d858b25ffb288b5175d5 373 SUPERFAMILY SSF53187 3 187 1.19E-79 T 22-04-2016 APT61_RS10830 b9c7952d71c0d858b25ffb288b5175d5 373 SUPERFAMILY SSF53187 288 371 1.19E-79 T 22-04-2016 APT61_RS10830 b9c7952d71c0d858b25ffb288b5175d5 373 Gene3D G3DSA:3.30.70.360 172 287 7.9E-38 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS19510 693258d62137023eaec6cbd377caed3e 845 Gene3D G3DSA:2.30.120.10 365 432 2.4E-24 T 22-04-2016 APT61_RS19510 693258d62137023eaec6cbd377caed3e 845 Gene3D G3DSA:3.60.20.10 289 364 3.8E-76 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS19510 693258d62137023eaec6cbd377caed3e 845 Gene3D G3DSA:3.60.20.10 441 661 3.8E-76 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS19510 693258d62137023eaec6cbd377caed3e 845 Gene3D G3DSA:1.10.287.150 185 233 2.1E-23 T 22-04-2016 APT61_RS19510 693258d62137023eaec6cbd377caed3e 845 PANTHER PTHR34218 285 845 3.2E-93 T 22-04-2016 APT61_RS19510 693258d62137023eaec6cbd377caed3e 845 PANTHER PTHR34218 32 255 3.2E-93 T 22-04-2016 APT61_RS19510 693258d62137023eaec6cbd377caed3e 845 Gene3D G3DSA:1.10.439.10 22 184 9.3E-53 T 22-04-2016 IPR023343 Penicillin amidase type, domain1 GO:0016811 APT61_RS19510 693258d62137023eaec6cbd377caed3e 845 PIRSF PIRSF001227 7 843 2.9E-123 T 22-04-2016 IPR014395 Penicillin acylase GO:0016811 APT61_RS19510 693258d62137023eaec6cbd377caed3e 845 Pfam PF01804 Penicillin amidase 33 832 1.4E-151 T 22-04-2016 IPR002692 Penicillin/cephalosporin acylase GO:0016787|GO:0017000 APT61_RS19510 693258d62137023eaec6cbd377caed3e 845 SUPERFAMILY SSF56235 32 223 1.44E-208 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS19510 693258d62137023eaec6cbd377caed3e 845 SUPERFAMILY SSF56235 281 843 1.44E-208 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS03715 e4fd9fe694d565b5e8641a65659895e5 387 PANTHER PTHR11496:SF65 1 387 8.5E-239 T 22-04-2016 APT61_RS03715 e4fd9fe694d565b5e8641a65659895e5 387 SUPERFAMILY SSF56796 1 385 1.44E-106 T 22-04-2016 APT61_RS03715 e4fd9fe694d565b5e8641a65659895e5 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 359 4.0E-91 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APT61_RS03715 e4fd9fe694d565b5e8641a65659895e5 387 PANTHER PTHR11496 1 387 8.5E-239 T 22-04-2016 APT61_RS03715 e4fd9fe694d565b5e8641a65659895e5 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APT61_RS03715 e4fd9fe694d565b5e8641a65659895e5 387 Gene3D G3DSA:3.40.50.1970 1 184 6.0E-54 T 22-04-2016 APT61_RS03715 e4fd9fe694d565b5e8641a65659895e5 387 Gene3D G3DSA:1.20.1090.10 185 386 2.2E-54 T 22-04-2016 APT61_RS03715 e4fd9fe694d565b5e8641a65659895e5 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 22-04-2016 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 APT61_RS14405 fbb3901d8f3ee64f89fb9d300a12a1e5 196 SUPERFAMILY SSF55469 13 192 1.44E-41 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APT61_RS14405 fbb3901d8f3ee64f89fb9d300a12a1e5 196 Pfam PF00881 Nitroreductase family 18 174 9.8E-13 T 22-04-2016 IPR029479 Nitroreductase APT61_RS14405 fbb3901d8f3ee64f89fb9d300a12a1e5 196 Hamap MF_01204 Probable malonic semialdehyde reductase RutE [rutE]. 2 196 47.107 T 22-04-2016 IPR023936 NADH dehydrogenase/NAD(P)H nitroreductase, putative, RutE GO:0016491|GO:0055114 APT61_RS14405 fbb3901d8f3ee64f89fb9d300a12a1e5 196 PANTHER PTHR23026:SF110 13 192 4.0E-105 T 22-04-2016 APT61_RS14405 fbb3901d8f3ee64f89fb9d300a12a1e5 196 Gene3D G3DSA:3.40.109.10 7 193 5.2E-43 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APT61_RS14405 fbb3901d8f3ee64f89fb9d300a12a1e5 196 PANTHER PTHR23026 13 192 4.0E-105 T 22-04-2016 APT61_RS02725 b4c9009975db298f02f870818903bf5c 85 SUPERFAMILY SSF110324 2 82 1.53E-34 T 22-04-2016 APT61_RS02725 b4c9009975db298f02f870818903bf5c 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 6.0E-18 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02725 b4c9009975db298f02f870818903bf5c 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.9E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02725 b4c9009975db298f02f870818903bf5c 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.9E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02725 b4c9009975db298f02f870818903bf5c 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.9E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02725 b4c9009975db298f02f870818903bf5c 85 Pfam PF01016 Ribosomal L27 protein 2 82 2.3E-39 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02725 b4c9009975db298f02f870818903bf5c 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02725 b4c9009975db298f02f870818903bf5c 85 PANTHER PTHR15893 1 85 3.3E-52 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02725 b4c9009975db298f02f870818903bf5c 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.171 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02725 b4c9009975db298f02f870818903bf5c 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 7.2E-44 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02725 b4c9009975db298f02f870818903bf5c 85 Gene3D G3DSA:2.40.50.100 20 82 4.5E-32 T 22-04-2016 APT61_RS05940 cfc927247fa765bfcc31def7ecff1ead 171 PANTHER PTHR14021 1 166 3.1E-63 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 APT61_RS05940 cfc927247fa765bfcc31def7ecff1ead 171 SUPERFAMILY SSF47144 77 170 1.83E-25 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 APT61_RS05940 cfc927247fa765bfcc31def7ecff1ead 171 PANTHER PTHR14021:SF15 1 166 3.1E-63 T 22-04-2016 APT61_RS05940 cfc927247fa765bfcc31def7ecff1ead 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 169 24.467 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 APT61_RS05940 cfc927247fa765bfcc31def7ecff1ead 171 Gene3D G3DSA:1.20.1280.20 81 170 4.5E-31 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 APT61_RS05940 cfc927247fa765bfcc31def7ecff1ead 171 SMART SM00271 1 66 3.6E-9 T 22-04-2016 IPR001623 DnaJ domain APT61_RS05940 cfc927247fa765bfcc31def7ecff1ead 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 168 3.3E-63 T 22-04-2016 IPR004640 Co-chaperone Hsc20 GO:0006457|GO:0051087 APT61_RS05940 cfc927247fa765bfcc31def7ecff1ead 171 SUPERFAMILY SSF46565 1 74 6.54E-18 T 22-04-2016 IPR001623 DnaJ domain APT61_RS05940 cfc927247fa765bfcc31def7ecff1ead 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 161 5.8E-18 T 22-04-2016 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 APT61_RS05940 cfc927247fa765bfcc31def7ecff1ead 171 Gene3D G3DSA:1.10.287.110 1 73 2.9E-27 T 22-04-2016 IPR001623 DnaJ domain APT61_RS05940 cfc927247fa765bfcc31def7ecff1ead 171 Pfam PF00226 DnaJ domain 2 70 1.5E-6 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18040 69c41df1f1981adc21fa0a5fdfa28f96 251 PANTHER PTHR11935:SF7 1 251 3.1E-99 T 22-04-2016 APT61_RS18040 69c41df1f1981adc21fa0a5fdfa28f96 251 PANTHER PTHR11935 1 251 3.1E-99 T 22-04-2016 APT61_RS18040 69c41df1f1981adc21fa0a5fdfa28f96 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 1.5E-21 T 22-04-2016 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APT61_RS18040 69c41df1f1981adc21fa0a5fdfa28f96 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 4.4E-103 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APT61_RS18040 69c41df1f1981adc21fa0a5fdfa28f96 251 PIRSF PIRSF005457 1 251 1.3E-89 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APT61_RS18040 69c41df1f1981adc21fa0a5fdfa28f96 251 SMART SM00849 11 165 9.7E-33 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS18040 69c41df1f1981adc21fa0a5fdfa28f96 251 Pfam PF00753 Metallo-beta-lactamase superfamily 13 165 6.8E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS18040 69c41df1f1981adc21fa0a5fdfa28f96 251 SUPERFAMILY SSF56281 1 251 4.85E-65 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS18040 69c41df1f1981adc21fa0a5fdfa28f96 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 44.968 T 22-04-2016 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386|UniPathway: UPA00619 APT61_RS18040 69c41df1f1981adc21fa0a5fdfa28f96 251 Gene3D G3DSA:3.60.15.10 4 251 5.1E-83 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS13130 90ee683626962cedc5e9947f83863881 105 PANTHER PTHR34581:SF2 4 105 2.1E-52 T 22-04-2016 APT61_RS13130 90ee683626962cedc5e9947f83863881 105 PANTHER PTHR34581 4 105 2.1E-52 T 22-04-2016 APT61_RS13130 90ee683626962cedc5e9947f83863881 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 2.0E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS13130 90ee683626962cedc5e9947f83863881 105 SUPERFAMILY SSF52794 4 102 9.94E-33 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS13130 90ee683626962cedc5e9947f83863881 105 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 1 94 2.1E-34 T 22-04-2016 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 APT61_RS13130 90ee683626962cedc5e9947f83863881 105 Gene3D G3DSA:3.40.50.270 1 102 1.2E-35 T 22-04-2016 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 466 3.4E-130 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 SMART SM01350 179 467 7.7E-219 T 22-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 PANTHER PTHR11811 1 466 1.5E-301 T 22-04-2016 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 22-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 SUPERFAMILY SSF51735 4 173 3.68E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 Gene3D G3DSA:1.10.1040.10 181 433 1.7E-116 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 PANTHER PTHR11811:SF25 1 466 1.5E-301 T 22-04-2016 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 Gene3D G3DSA:3.40.50.720 1 180 1.7E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 SUPERFAMILY SSF48179 177 467 2.86E-129 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 22-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 3.4E-51 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 4.1E-229 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 Gene3D G3DSA:1.20.5.320 436 467 1.3E-22 T 22-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APT61_RS07805 2d7b3eb7f66535a5c772da1a24cf9f06 468 PIRSF PIRSF000109 1 468 6.4E-241 T 22-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 APT61_RS06625 dbdd7fcdac7640337c29db7766d444e8 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APT61_RS06625 dbdd7fcdac7640337c29db7766d444e8 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.178 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 APT61_RS06625 dbdd7fcdac7640337c29db7766d444e8 310 PANTHER PTHR18895:SF66 4 308 1.4E-190 T 22-04-2016 APT61_RS06625 dbdd7fcdac7640337c29db7766d444e8 310 Gene3D G3DSA:3.40.50.150 108 296 1.6E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS06625 dbdd7fcdac7640337c29db7766d444e8 310 PIRSF PIRSF037167 1 307 4.0E-149 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 APT61_RS06625 dbdd7fcdac7640337c29db7766d444e8 310 SUPERFAMILY SSF53335 15 294 1.63E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS06625 dbdd7fcdac7640337c29db7766d444e8 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 4.0E-138 T 22-04-2016 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 APT61_RS06625 dbdd7fcdac7640337c29db7766d444e8 310 PANTHER PTHR18895 4 308 1.4E-190 T 22-04-2016 APT61_RS06625 dbdd7fcdac7640337c29db7766d444e8 310 Gene3D G3DSA:1.10.8.10 15 106 3.4E-7 T 22-04-2016 APT61_RS06625 dbdd7fcdac7640337c29db7766d444e8 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 14 303 1.4E-105 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 APT61_RS06625 dbdd7fcdac7640337c29db7766d444e8 310 Pfam PF05175 Methyltransferase small domain 132 215 1.2E-14 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APT61_RS21795 2e6b676ecb214fead9adea195da6c4ec 376 Gene3D G3DSA:3.40.50.300 1 313 8.7E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21795 2e6b676ecb214fead9adea195da6c4ec 376 PIRSF PIRSF034888 1 371 4.2E-57 T 22-04-2016 IPR014592 Predicted P-loop ATP-binding protein, VCA0200 APT61_RS21795 2e6b676ecb214fead9adea195da6c4ec 376 Pfam PF12476 Protein of unknown function (DUF3696) 325 368 9.1E-12 T 22-04-2016 IPR022532 Domain of unknown function DUF3696, C-terminal APT61_RS21795 2e6b676ecb214fead9adea195da6c4ec 376 SUPERFAMILY SSF52540 1 133 4.12E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21795 2e6b676ecb214fead9adea195da6c4ec 376 SUPERFAMILY SSF52540 230 311 4.12E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21795 2e6b676ecb214fead9adea195da6c4ec 376 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 311 5.2E-19 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS15595 d0499384a9cabe51374cbd7274f13241 531 Gene3D G3DSA:3.40.50.300 319 528 1.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15595 d0499384a9cabe51374cbd7274f13241 531 Pfam PF00005 ABC transporter 18 184 9.4E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15595 d0499384a9cabe51374cbd7274f13241 531 Pfam PF00005 ABC transporter 336 467 5.4E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15595 d0499384a9cabe51374cbd7274f13241 531 Gene3D G3DSA:3.40.50.300 5 100 4.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15595 d0499384a9cabe51374cbd7274f13241 531 Gene3D G3DSA:3.40.50.300 132 280 4.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15595 d0499384a9cabe51374cbd7274f13241 531 SUPERFAMILY SSF52540 298 523 7.06E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15595 d0499384a9cabe51374cbd7274f13241 531 PANTHER PTHR19211 2 526 0.0 T 22-04-2016 APT61_RS15595 d0499384a9cabe51374cbd7274f13241 531 SMART SM00382 344 512 3.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15595 d0499384a9cabe51374cbd7274f13241 531 SMART SM00382 26 228 3.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15595 d0499384a9cabe51374cbd7274f13241 531 Pfam PF12848 ABC transporter 224 309 1.5E-20 T 22-04-2016 IPR032781 ABC-transporter extension domain APT61_RS15595 d0499384a9cabe51374cbd7274f13241 531 SUPERFAMILY SSF52540 6 237 3.83E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15595 d0499384a9cabe51374cbd7274f13241 531 PANTHER PTHR19211:SF38 2 526 0.0 T 22-04-2016 APT61_RS00030 386e2d74bf7ff601e97445f15b65cdc1 152 Gene3D G3DSA:3.30.70.920 59 140 5.8E-24 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT61_RS00030 386e2d74bf7ff601e97445f15b65cdc1 152 Pfam PF01037 Lrp/AsnC ligand binding domain 76 143 2.5E-17 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT61_RS00030 386e2d74bf7ff601e97445f15b65cdc1 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 3.5E-14 T 22-04-2016 APT61_RS00030 386e2d74bf7ff601e97445f15b65cdc1 152 Gene3D G3DSA:1.10.10.10 1 57 2.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00030 386e2d74bf7ff601e97445f15b65cdc1 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT61_RS00030 386e2d74bf7ff601e97445f15b65cdc1 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 4.7E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS00030 386e2d74bf7ff601e97445f15b65cdc1 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 4.7E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS00030 386e2d74bf7ff601e97445f15b65cdc1 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 4.7E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS00030 386e2d74bf7ff601e97445f15b65cdc1 152 PANTHER PTHR30154:SF2 1 152 4.8E-67 T 22-04-2016 APT61_RS00030 386e2d74bf7ff601e97445f15b65cdc1 152 SUPERFAMILY SSF54909 67 152 2.82E-19 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS00030 386e2d74bf7ff601e97445f15b65cdc1 152 SUPERFAMILY SSF46785 4 66 2.45E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00030 386e2d74bf7ff601e97445f15b65cdc1 152 SMART SM00344 6 113 2.9E-46 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APT61_RS00030 386e2d74bf7ff601e97445f15b65cdc1 152 PANTHER PTHR30154 1 152 4.8E-67 T 22-04-2016 APT61_RS02350 837d89dfb287542e3712614d7b61beda 246 SUPERFAMILY SSF51069 24 244 1.31E-78 T 22-04-2016 IPR001148 Alpha carbonic anhydrase APT61_RS02350 837d89dfb287542e3712614d7b61beda 246 SMART SM01057 25 245 5.6E-100 T 22-04-2016 IPR001148 Alpha carbonic anhydrase APT61_RS02350 837d89dfb287542e3712614d7b61beda 246 PANTHER PTHR18952 8 244 9.8E-78 T 22-04-2016 IPR023561 Carbonic anhydrase, alpha-class APT61_RS02350 837d89dfb287542e3712614d7b61beda 246 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 116 132 - T 22-04-2016 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS02350 837d89dfb287542e3712614d7b61beda 246 Pfam PF00194 Eukaryotic-type carbonic anhydrase 24 245 9.5E-51 T 22-04-2016 IPR001148 Alpha carbonic anhydrase APT61_RS02350 837d89dfb287542e3712614d7b61beda 246 Gene3D G3DSA:3.10.200.10 23 245 2.9E-74 T 22-04-2016 IPR001148 Alpha carbonic anhydrase APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 Pfam PF03610 PTS system fructose IIA component 563 629 6.2E-5 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 Gene3D G3DSA:1.10.10.10 5 67 9.7E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 Gene3D G3DSA:1.10.1790.10 818 903 1.6E-4 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 SUPERFAMILY SSF46785 22 64 7.04E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 Pfam PF00158 Sigma-54 interaction domain 105 271 3.7E-49 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 SUPERFAMILY SSF63520 817 904 3.14E-9 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 SUPERFAMILY SSF52540 105 344 2.13E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 201 216 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 Pfam PF00874 PRD domain 826 905 9.4E-6 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 PANTHER PTHR32071:SF41 30 458 1.8E-117 T 22-04-2016 APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 SMART SM00382 128 278 3.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 Gene3D G3DSA:1.10.8.60 290 360 9.3E-7 T 22-04-2016 APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 Gene3D G3DSA:3.40.50.300 102 280 7.6E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 SUPERFAMILY SSF53062 562 673 5.23E-11 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 PANTHER PTHR32071 30 458 1.8E-117 T 22-04-2016 APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 Gene3D G3DSA:3.40.50.510 560 690 3.2E-43 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APT61_RS15500 739e46d5e21793aa87d56cc8bfb59810 920 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 132 145 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT61_RS18655 81cff656d5dae4cdaefbedae1fbc0e5d 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 5.0E-73 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APT61_RS18655 81cff656d5dae4cdaefbedae1fbc0e5d 152 PANTHER PTHR34701 2 151 1.6E-65 T 22-04-2016 APT61_RS18655 81cff656d5dae4cdaefbedae1fbc0e5d 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 139 5.8E-20 T 22-04-2016 IPR020603 MraZ domain APT61_RS18655 81cff656d5dae4cdaefbedae1fbc0e5d 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 4.4E-25 T 22-04-2016 IPR020603 MraZ domain APT61_RS18655 81cff656d5dae4cdaefbedae1fbc0e5d 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 57.629 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APT61_RS18655 81cff656d5dae4cdaefbedae1fbc0e5d 152 SUPERFAMILY SSF89447 1 135 1.29E-45 T 22-04-2016 APT61_RS18655 81cff656d5dae4cdaefbedae1fbc0e5d 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 1.1E-65 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 APT61_RS06980 16cd53b4c2d8eef0402b68c6bab3d0d0 84 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 77 2.3E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS06980 16cd53b4c2d8eef0402b68c6bab3d0d0 84 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APT61_RS06980 16cd53b4c2d8eef0402b68c6bab3d0d0 84 SUPERFAMILY SSF54292 3 83 6.95E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS06980 16cd53b4c2d8eef0402b68c6bab3d0d0 84 Gene3D G3DSA:3.10.20.30 3 83 1.1E-18 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS20015 36e09ccee198d1c0cf4892f5ff8ff245 127 Gene3D G3DSA:1.20.120.10 22 127 2.9E-42 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 APT61_RS20015 36e09ccee198d1c0cf4892f5ff8ff245 127 PIRSF PIRSF000029 1 127 2.8E-54 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 APT61_RS20015 36e09ccee198d1c0cf4892f5ff8ff245 127 Pfam PF07361 Cytochrome b562 23 127 2.9E-31 T 22-04-2016 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 APT61_RS20015 36e09ccee198d1c0cf4892f5ff8ff245 127 SUPERFAMILY SSF47175 22 127 1.09E-31 T 22-04-2016 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 Gene3D G3DSA:3.20.20.80 337 625 3.3E-119 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 PANTHER PTHR10066:SF72 596 1023 0.0 T 22-04-2016 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 PANTHER PTHR10066:SF72 8 578 0.0 T 22-04-2016 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 Gene3D G3DSA:2.70.98.10 742 1026 7.1E-86 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 SUPERFAMILY SSF74650 742 1025 7.38E-92 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 337 629 2.1E-119 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 Pfam PF16353 Domain of unknown function(DUF4981) 641 728 8.6E-18 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 Hamap MF_01687 Beta-galactosidase [lacZ]. 7 1028 17.52 T 22-04-2016 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 387 412 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 Gene3D G3DSA:2.60.40.320 210 335 3.2E-32 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 449 464 3.2E-39 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 148 163 3.2E-39 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 377 395 3.2E-39 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 533 548 3.2E-39 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 PRINTS PR00132 Glycosyl hydrolase family 2 signature 346 360 3.2E-39 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 SUPERFAMILY SSF49303 624 731 9.59E-28 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 Gene3D G3DSA:2.60.120.260 12 209 9.9E-85 T 22-04-2016 IPR008979 Galactose-binding domain-like APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 SMART SM01038 753 1026 1.6E-111 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 PANTHER PTHR10066 596 1023 0.0 T 22-04-2016 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 PANTHER PTHR10066 8 578 0.0 T 22-04-2016 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 SUPERFAMILY SSF49303 222 335 8.06E-25 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 Pfam PF00703 Glycosyl hydrolases family 2 222 335 2.9E-14 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 Pfam PF02929 Beta galactosidase small chain 757 1024 1.4E-58 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 SUPERFAMILY SSF49785 16 220 4.54E-68 T 22-04-2016 IPR008979 Galactose-binding domain-like APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 SUPERFAMILY SSF51445 337 626 1.77E-105 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 54 220 2.5E-63 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 Gene3D G3DSA:2.60.40.320 627 730 9.4E-27 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 APT61_RS17195 2feb8e1f8c25e4404cab7b05b8fae767 1028 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 449 463 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS03975 e0737025dca3e5bad2684cd40840fec9 233 Gene3D G3DSA:3.20.20.10 1 233 3.2E-93 T 22-04-2016 IPR029066 PLP-binding barrel APT61_RS03975 e0737025dca3e5bad2684cd40840fec9 233 SUPERFAMILY SSF51419 1 227 9.16E-80 T 22-04-2016 IPR029066 PLP-binding barrel APT61_RS03975 e0737025dca3e5bad2684cd40840fec9 233 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 229 1.5E-98 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 APT61_RS03975 e0737025dca3e5bad2684cd40840fec9 233 PANTHER PTHR10146 1 233 1.9E-104 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 APT61_RS03975 e0737025dca3e5bad2684cd40840fec9 233 Pfam PF01168 Alanine racemase, N-terminal domain 7 229 4.1E-31 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS03975 e0737025dca3e5bad2684cd40840fec9 233 PIRSF PIRSF004848 1 233 2.9E-73 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 APT61_RS03975 e0737025dca3e5bad2684cd40840fec9 233 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 79 93 - T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 APT61_RS15565 8b4d26dcbc07e8e66c9c70092823a33a 250 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 9 248 1.8E-127 T 22-04-2016 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823|UniPathway: UPA00344 APT61_RS15565 8b4d26dcbc07e8e66c9c70092823a33a 250 SUPERFAMILY SSF69572 4 249 2.62E-84 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APT61_RS15565 8b4d26dcbc07e8e66c9c70092823a33a 250 Pfam PF00899 ThiF family 13 245 3.2E-59 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APT61_RS15565 8b4d26dcbc07e8e66c9c70092823a33a 250 PANTHER PTHR10953 4 249 2.2E-83 T 22-04-2016 APT61_RS15565 8b4d26dcbc07e8e66c9c70092823a33a 250 Gene3D G3DSA:3.40.50.720 4 249 4.9E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1293 0.0 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 SUPERFAMILY SSF56042 818 1033 5.83E-57 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 PANTHER PTHR10099 1 1295 0.0 T 22-04-2016 APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 PANTHER PTHR10099:SF5 1 1295 0.0 T 22-04-2016 APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 SUPERFAMILY SSF109736 155 220 1.96E-21 T 22-04-2016 APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 588 3.3E-26 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 827 966 7.7E-14 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 2 1295 21.617 T 22-04-2016 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 SUPERFAMILY SSF56042 432 615 1.05E-52 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 SUPERFAMILY SSF82697 1 152 7.85E-53 T 22-04-2016 APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 SUPERFAMILY SSF52317 1036 1293 1.46E-98 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 Gene3D G3DSA:3.40.50.880 1040 1263 9.2E-12 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 Gene3D G3DSA:3.30.1330.10 211 421 2.3E-39 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 Gene3D G3DSA:3.30.1330.10 646 810 1.5E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 SMART SM01211 1039 1294 1.2E-158 T 22-04-2016 APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 SUPERFAMILY SSF55326 619 816 8.63E-67 T 22-04-2016 APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 SUPERFAMILY SSF55326 221 428 3.24E-64 T 22-04-2016 APT61_RS05850 7240b302aac41c5fed88c0beb3c55c29 1295 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1039 1292 3.7E-105 T 22-04-2016 APT61_RS02230 2951cfb8c9938b889d6c8bf7471b4e2a 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 1.7E-59 T 22-04-2016 IPR007456 Smg APT61_RS02230 2951cfb8c9938b889d6c8bf7471b4e2a 157 Hamap MF_00598 Protein Smg [smg]. 1 157 33.256 T 22-04-2016 IPR007456 Smg APT61_RS02230 2951cfb8c9938b889d6c8bf7471b4e2a 157 PANTHER PTHR38692 1 157 2.4E-85 T 22-04-2016 APT61_RS02230 2951cfb8c9938b889d6c8bf7471b4e2a 157 PANTHER PTHR38692:SF1 1 157 2.4E-85 T 22-04-2016 APT61_RS04845 44b9c9d3cb190a0141fea9ce7b0b0c86 363 SUPERFAMILY SSF53955 46 354 5.44E-97 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS04845 44b9c9d3cb190a0141fea9ce7b0b0c86 363 PANTHER PTHR30163 1 357 9.6E-206 T 22-04-2016 IPR011757 Lytic transglycosylase MltB APT61_RS04845 44b9c9d3cb190a0141fea9ce7b0b0c86 363 Gene3D G3DSA:1.10.530.10 111 164 4.4E-58 T 22-04-2016 APT61_RS04845 44b9c9d3cb190a0141fea9ce7b0b0c86 363 Gene3D G3DSA:1.10.530.10 245 356 4.4E-58 T 22-04-2016 APT61_RS04845 44b9c9d3cb190a0141fea9ce7b0b0c86 363 Pfam PF13406 Transglycosylase SLT domain 57 350 1.0E-93 T 22-04-2016 IPR031304 Transglycosylase SLT domain 2 APT61_RS04845 44b9c9d3cb190a0141fea9ce7b0b0c86 363 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 62 352 3.9E-124 T 22-04-2016 IPR011757 Lytic transglycosylase MltB APT61_RS04845 44b9c9d3cb190a0141fea9ce7b0b0c86 363 PANTHER PTHR30163:SF0 1 357 9.6E-206 T 22-04-2016 APT61_RS04960 1acea6bf67fb155b4bef07d1c87e10e1 336 PANTHER PTHR30303:SF0 1 336 7.0E-158 T 22-04-2016 APT61_RS04960 1acea6bf67fb155b4bef07d1c87e10e1 336 PANTHER PTHR30303 1 336 7.0E-158 T 22-04-2016 APT61_RS04960 1acea6bf67fb155b4bef07d1c87e10e1 336 PIRSF PIRSF005644 1 336 1.7E-121 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE APT61_RS04960 1acea6bf67fb155b4bef07d1c87e10e1 336 SUPERFAMILY SSF55326 3 155 2.62E-33 T 22-04-2016 APT61_RS04960 1acea6bf67fb155b4bef07d1c87e10e1 336 Gene3D G3DSA:3.90.650.10 164 316 5.2E-26 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS04960 1acea6bf67fb155b4bef07d1c87e10e1 336 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 313 1.1E-25 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS04960 1acea6bf67fb155b4bef07d1c87e10e1 336 Gene3D G3DSA:3.30.1330.10 15 154 9.1E-24 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APT61_RS04960 1acea6bf67fb155b4bef07d1c87e10e1 336 Pfam PF00586 AIR synthase related protein, N-terminal domain 53 152 1.1E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APT61_RS04960 1acea6bf67fb155b4bef07d1c87e10e1 336 SUPERFAMILY SSF56042 162 331 2.39E-40 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS04960 1acea6bf67fb155b4bef07d1c87e10e1 336 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 3 336 1.1E-137 T 22-04-2016 IPR011854 Hydrogenase expression/formation protein HypE APT61_RS03695 ff90fcd4dbe56a9f2be5819b8ab2dcb2 470 SUPERFAMILY SSF49503 315 466 2.07E-22 T 22-04-2016 IPR008972 Cupredoxin APT61_RS03695 ff90fcd4dbe56a9f2be5819b8ab2dcb2 470 Gene3D G3DSA:2.60.40.420 32 170 2.9E-19 T 22-04-2016 IPR008972 Cupredoxin APT61_RS03695 ff90fcd4dbe56a9f2be5819b8ab2dcb2 470 PANTHER PTHR11709 52 287 4.2E-171 T 22-04-2016 APT61_RS03695 ff90fcd4dbe56a9f2be5819b8ab2dcb2 470 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 467 57.924 T 22-04-2016 IPR026589 Cell division protein FtsP GO:0043093 APT61_RS03695 ff90fcd4dbe56a9f2be5819b8ab2dcb2 470 Pfam PF07731 Multicopper oxidase 359 468 1.4E-15 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 APT61_RS03695 ff90fcd4dbe56a9f2be5819b8ab2dcb2 470 Gene3D G3DSA:2.60.40.420 363 468 9.5E-15 T 22-04-2016 IPR008972 Cupredoxin APT61_RS03695 ff90fcd4dbe56a9f2be5819b8ab2dcb2 470 Gene3D G3DSA:2.60.40.420 171 288 1.3E-29 T 22-04-2016 IPR008972 Cupredoxin APT61_RS03695 ff90fcd4dbe56a9f2be5819b8ab2dcb2 470 SUPERFAMILY SSF49503 3 165 9.21E-23 T 22-04-2016 IPR008972 Cupredoxin APT61_RS03695 ff90fcd4dbe56a9f2be5819b8ab2dcb2 470 PANTHER PTHR11709:SF69 52 287 4.2E-171 T 22-04-2016 APT61_RS03695 ff90fcd4dbe56a9f2be5819b8ab2dcb2 470 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 27 0.0013 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APT61_RS03695 ff90fcd4dbe56a9f2be5819b8ab2dcb2 470 SUPERFAMILY SSF49503 172 311 1.78E-29 T 22-04-2016 IPR008972 Cupredoxin APT61_RS03695 ff90fcd4dbe56a9f2be5819b8ab2dcb2 470 Pfam PF07732 Multicopper oxidase 52 166 8.1E-25 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 APT61_RS22215 0b6b76297ac244f993c254bda301be32 177 Gene3D G3DSA:1.10.520.20 3 102 4.1E-34 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain APT61_RS22215 0b6b76297ac244f993c254bda301be32 177 SUPERFAMILY SSF47928 3 102 2.09E-26 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain APT61_RS22215 0b6b76297ac244f993c254bda301be32 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.82E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APT61_RS22215 0b6b76297ac244f993c254bda301be32 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 4.82E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APT61_RS22215 0b6b76297ac244f993c254bda301be32 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 4.82E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APT61_RS22215 0b6b76297ac244f993c254bda301be32 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.82E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APT61_RS22215 0b6b76297ac244f993c254bda301be32 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 4.82E-28 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APT61_RS22215 0b6b76297ac244f993c254bda301be32 177 PANTHER PTHR11910 8 176 1.7E-55 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APT61_RS22215 0b6b76297ac244f993c254bda301be32 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 APT61_RS22215 0b6b76297ac244f993c254bda301be32 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 3.2E-50 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APT61_RS22215 0b6b76297ac244f993c254bda301be32 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 7.0E-64 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APT61_RS22215 0b6b76297ac244f993c254bda301be32 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.255 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 APT61_RS20530 69e5ef145ab8d04935623dc327e2d79a 196 PANTHER PTHR30086:SF12 3 190 2.0E-44 T 22-04-2016 APT61_RS20530 69e5ef145ab8d04935623dc327e2d79a 196 PANTHER PTHR30086 3 190 2.0E-44 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS20530 69e5ef145ab8d04935623dc327e2d79a 196 Pfam PF01810 LysE type translocator 13 185 1.3E-11 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS01050 16ca35e96e684f209e666f32f70d9bbf 754 PIRSF PIRSF000382 2 754 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APT61_RS01050 16ca35e96e684f209e666f32f70d9bbf 754 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 312 2.7E-125 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APT61_RS01050 16ca35e96e684f209e666f32f70d9bbf 754 PANTHER PTHR30519 1 752 0.0 T 22-04-2016 APT61_RS01050 16ca35e96e684f209e666f32f70d9bbf 754 Gene3D G3DSA:3.20.20.210 387 752 3.6E-135 T 22-04-2016 APT61_RS01050 16ca35e96e684f209e666f32f70d9bbf 754 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 426 749 1.8E-161 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APT61_RS01050 16ca35e96e684f209e666f32f70d9bbf 754 SUPERFAMILY SSF51726 391 752 1.44E-120 T 22-04-2016 APT61_RS01050 16ca35e96e684f209e666f32f70d9bbf 754 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 752 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APT61_RS01050 16ca35e96e684f209e666f32f70d9bbf 754 SUPERFAMILY SSF51726 5 389 1.57E-113 T 22-04-2016 APT61_RS01050 16ca35e96e684f209e666f32f70d9bbf 754 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 753 37.506 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APT61_RS01050 16ca35e96e684f209e666f32f70d9bbf 754 PANTHER PTHR30519:SF0 1 752 0.0 T 22-04-2016 APT61_RS01050 16ca35e96e684f209e666f32f70d9bbf 754 Gene3D G3DSA:3.20.20.210 5 384 3.4E-150 T 22-04-2016 APT61_RS14925 92be7863fdde3aed15ea21e6b3aac820 248 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 46.418 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APT61_RS14925 92be7863fdde3aed15ea21e6b3aac820 248 Pfam PF02348 Cytidylyltransferase 4 221 9.9E-73 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APT61_RS14925 92be7863fdde3aed15ea21e6b3aac820 248 PANTHER PTHR21485 1 248 7.2E-127 T 22-04-2016 APT61_RS14925 92be7863fdde3aed15ea21e6b3aac820 248 PANTHER PTHR21485:SF4 1 248 7.2E-127 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APT61_RS14925 92be7863fdde3aed15ea21e6b3aac820 248 SUPERFAMILY SSF53448 3 245 1.26E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS14925 92be7863fdde3aed15ea21e6b3aac820 248 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 240 1.4E-134 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 APT61_RS14925 92be7863fdde3aed15ea21e6b3aac820 248 Gene3D G3DSA:3.90.550.10 1 247 2.5E-85 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS19795 d05722c57d7030dc4e1f13a7e96a07d3 197 Pfam PF13489 Methyltransferase domain 20 132 8.5E-17 T 22-04-2016 APT61_RS19795 d05722c57d7030dc4e1f13a7e96a07d3 197 PANTHER PTHR10108 5 133 1.4E-35 T 22-04-2016 APT61_RS19795 d05722c57d7030dc4e1f13a7e96a07d3 197 SUPERFAMILY SSF53335 4 179 2.92E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS19795 d05722c57d7030dc4e1f13a7e96a07d3 197 Gene3D G3DSA:3.40.50.150 4 180 3.7E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS19795 d05722c57d7030dc4e1f13a7e96a07d3 197 PANTHER PTHR10108:SF925 5 133 1.4E-35 T 22-04-2016 APT61_RS03615 4ca576b92eb7ee2904447760602aafb8 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 42.157 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 APT61_RS03615 4ca576b92eb7ee2904447760602aafb8 275 SUPERFAMILY SSF56300 16 268 1.2E-61 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS03615 4ca576b92eb7ee2904447760602aafb8 275 Gene3D G3DSA:3.60.21.10 14 261 1.5E-40 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS03615 4ca576b92eb7ee2904447760602aafb8 275 PANTHER PTHR12905:SF7 51 275 4.1E-116 T 22-04-2016 APT61_RS03615 4ca576b92eb7ee2904447760602aafb8 275 PANTHER PTHR12905 15 35 4.1E-116 T 22-04-2016 APT61_RS03615 4ca576b92eb7ee2904447760602aafb8 275 PANTHER PTHR12905 51 275 4.1E-116 T 22-04-2016 APT61_RS03615 4ca576b92eb7ee2904447760602aafb8 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 4.3E-21 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APT61_RS03615 4ca576b92eb7ee2904447760602aafb8 275 PANTHER PTHR12905:SF7 15 35 4.1E-116 T 22-04-2016 APT61_RS03615 4ca576b92eb7ee2904447760602aafb8 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 3.0E-23 T 22-04-2016 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 APT61_RS21455 031a6cb73984e2ffabfe11133f5c41c2 466 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 76 101 - T 22-04-2016 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 APT61_RS21455 031a6cb73984e2ffabfe11133f5c41c2 466 PANTHER PTHR11328:SF24 18 464 1.0E-109 T 22-04-2016 APT61_RS21455 031a6cb73984e2ffabfe11133f5c41c2 466 SUPERFAMILY SSF103473 28 403 5.49E-25 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS21455 031a6cb73984e2ffabfe11133f5c41c2 466 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 25 462 1.4E-101 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 APT61_RS21455 031a6cb73984e2ffabfe11133f5c41c2 466 Gene3D G3DSA:1.20.1250.20 40 221 1.0E-14 T 22-04-2016 APT61_RS21455 031a6cb73984e2ffabfe11133f5c41c2 466 Pfam PF13347 MFS/sugar transport protein 27 448 4.1E-83 T 22-04-2016 APT61_RS21455 031a6cb73984e2ffabfe11133f5c41c2 466 PANTHER PTHR11328 18 464 1.0E-109 T 22-04-2016 APT61_RS01610 43d538ea67322838a765b3799cde7e61 446 PIRSF PIRSF002746 1 446 4.0E-155 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APT61_RS01610 43d538ea67322838a765b3799cde7e61 446 PANTHER PTHR30354:SF8 1 446 0.0 T 22-04-2016 APT61_RS01610 43d538ea67322838a765b3799cde7e61 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 4 444 4.8E-176 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APT61_RS01610 43d538ea67322838a765b3799cde7e61 446 PANTHER PTHR30354 1 446 0.0 T 22-04-2016 APT61_RS01610 43d538ea67322838a765b3799cde7e61 446 Pfam PF02447 GntP family permease 5 441 1.5E-166 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 Pfam PF01011 PQQ enzyme repeat 664 696 8.7E-5 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 Pfam PF01011 PQQ enzyme repeat 721 758 2.3E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 Pfam PF01011 PQQ enzyme repeat 226 261 1.3E-9 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 Pfam PF01011 PQQ enzyme repeat 442 468 1.0E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 Pfam PF01011 PQQ enzyme repeat 293 320 3.2E-4 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 Pfam PF01011 PQQ enzyme repeat 357 389 7.9E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 15 792 0.0 T 22-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 SUPERFAMILY SSF50998 557 792 2.62E-157 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 SUPERFAMILY SSF50998 162 521 2.62E-157 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 PANTHER PTHR32303 576 794 0.0 T 22-04-2016 APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 PANTHER PTHR32303 129 507 0.0 T 22-04-2016 APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 Gene3D G3DSA:2.140.10.10 568 794 3.9E-163 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 Gene3D G3DSA:2.140.10.10 158 533 3.9E-163 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 404 425 - T 22-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 SMART SM00564 282 314 360.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 SMART SM00564 479 512 830.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 SMART SM00564 715 748 0.052 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 SMART SM00564 220 251 1.1E-6 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 SMART SM00564 339 380 0.0045 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 SMART SM00564 401 458 280.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 PANTHER PTHR32303:SF4 576 794 0.0 T 22-04-2016 APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 PANTHER PTHR32303:SF4 129 507 0.0 T 22-04-2016 APT61_RS18435 3d74fc7e16edf766b5301a14a36d3873 795 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 167 195 - T 22-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 APT61_RS19115 b55c252b5d5eb4640b54ad8f0f99de48 410 Pfam PF01381 Helix-turn-helix 7 59 1.8E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS19115 b55c252b5d5eb4640b54ad8f0f99de48 410 Gene3D G3DSA:3.40.50.620 64 230 6.6E-51 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS19115 b55c252b5d5eb4640b54ad8f0f99de48 410 SUPERFAMILY SSF52540 232 386 5.88E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19115 b55c252b5d5eb4640b54ad8f0f99de48 410 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 1.5E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APT61_RS19115 b55c252b5d5eb4640b54ad8f0f99de48 410 Gene3D G3DSA:3.40.50.300 231 400 1.0E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19115 b55c252b5d5eb4640b54ad8f0f99de48 410 PANTHER PTHR37512 14 408 2.2E-150 T 22-04-2016 APT61_RS19115 b55c252b5d5eb4640b54ad8f0f99de48 410 SMART SM00530 6 62 5.4E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS19115 b55c252b5d5eb4640b54ad8f0f99de48 410 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 1.6E-158 T 22-04-2016 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 APT61_RS19115 b55c252b5d5eb4640b54ad8f0f99de48 410 SUPERFAMILY SSF52374 66 229 9.65E-17 T 22-04-2016 APT61_RS19115 b55c252b5d5eb4640b54ad8f0f99de48 410 SUPERFAMILY SSF47413 6 59 3.94E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS19115 b55c252b5d5eb4640b54ad8f0f99de48 410 Gene3D G3DSA:1.10.260.40 5 59 1.8E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS19115 b55c252b5d5eb4640b54ad8f0f99de48 410 PIRSF PIRSF004776 2 410 1.3E-213 T 22-04-2016 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 APT61_RS19115 b55c252b5d5eb4640b54ad8f0f99de48 410 Pfam PF13521 AAA domain 234 394 4.0E-31 T 22-04-2016 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 PANTHER PTHR22807:SF30 36 427 8.2E-142 T 22-04-2016 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 Gene3D G3DSA:3.30.70.1170 172 229 1.5E-27 T 22-04-2016 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 SUPERFAMILY SSF48013 5 148 7.85E-35 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 PANTHER PTHR22807 36 427 8.2E-142 T 22-04-2016 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 315 326 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 7 427 4.4E-186 T 22-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 316 328 3.1E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 221 235 3.1E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 250 260 3.1E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 410 427 3.1E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 366 382 3.1E-31 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 428 70.965 T 22-04-2016 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 Pfam PF01029 NusB family 5 126 9.3E-25 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 SUPERFAMILY SSF53335 141 427 5.38E-77 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 Gene3D G3DSA:1.10.940.10 2 146 1.9E-47 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 Gene3D G3DSA:3.40.50.150 232 428 1.0E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 425 1.1E-78 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS02210 08107b35e6fcdaf533e30e48a62e0dc2 428 Gene3D G3DSA:1.10.287.730 147 171 2.1E-15 T 22-04-2016 APT61_RS04995 831ff278170fa666ac5d403ddb5d92bb 609 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 375 401 4.8E-6 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APT61_RS04995 831ff278170fa666ac5d403ddb5d92bb 609 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 225 249 4.8E-6 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APT61_RS04995 831ff278170fa666ac5d403ddb5d92bb 609 Pfam PF00361 Proton-conducting membrane transporter 150 406 1.8E-36 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APT61_RS04995 831ff278170fa666ac5d403ddb5d92bb 609 PANTHER PTHR22773 73 583 2.8E-293 T 22-04-2016 APT61_RS04995 831ff278170fa666ac5d403ddb5d92bb 609 PANTHER PTHR22773:SF87 73 583 2.8E-293 T 22-04-2016 APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 PANTHER PTHR21089 272 359 3.5E-152 T 22-04-2016 APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 PANTHER PTHR21089 18 256 3.5E-152 T 22-04-2016 APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.1E-48 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 SUPERFAMILY SSF69075 317 417 4.45E-27 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 5.2E-24 T 22-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 4.1E-49 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 418 2.3E-166 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.867 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 SUPERFAMILY SSF51735 162 315 5.34E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 SUPERFAMILY SSF69742 1 158 9.68E-47 T 22-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 PANTHER PTHR21089:SF3 272 359 3.5E-152 T 22-04-2016 APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 PANTHER PTHR21089:SF3 18 256 3.5E-152 T 22-04-2016 APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 PIRSF PIRSF000445 1 418 2.2E-154 T 22-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 Gene3D G3DSA:3.40.50.720 185 358 2.4E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS09185 8407a0f6df0d83ac396f8be9ccfebd4b 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 22-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 APT61_RS07705 eb6f7aca790f1f87f8804a3baf272e62 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 233 1.1E-74 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APT61_RS07705 eb6f7aca790f1f87f8804a3baf272e62 321 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 3 314 48.863 T 22-04-2016 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|UniPathway: UPA00128 APT61_RS07705 eb6f7aca790f1f87f8804a3baf272e62 321 PANTHER PTHR10366:SF246 5 318 1.1E-134 T 22-04-2016 APT61_RS07705 eb6f7aca790f1f87f8804a3baf272e62 321 Gene3D G3DSA:3.90.25.10 169 204 9.4E-39 T 22-04-2016 APT61_RS07705 eb6f7aca790f1f87f8804a3baf272e62 321 Gene3D G3DSA:3.90.25.10 259 299 9.4E-39 T 22-04-2016 APT61_RS07705 eb6f7aca790f1f87f8804a3baf272e62 321 Gene3D G3DSA:3.40.50.720 220 258 4.5E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07705 eb6f7aca790f1f87f8804a3baf272e62 321 Gene3D G3DSA:3.40.50.720 1 168 4.5E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07705 eb6f7aca790f1f87f8804a3baf272e62 321 PANTHER PTHR10366 5 318 1.1E-134 T 22-04-2016 APT61_RS07705 eb6f7aca790f1f87f8804a3baf272e62 321 Gene3D G3DSA:3.90.25.10 205 219 5.9E-13 T 22-04-2016 APT61_RS07705 eb6f7aca790f1f87f8804a3baf272e62 321 Gene3D G3DSA:3.90.25.10 300 318 5.9E-13 T 22-04-2016 APT61_RS07705 eb6f7aca790f1f87f8804a3baf272e62 321 SUPERFAMILY SSF51735 1 318 6.94E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS13975 49125b54c2503b8dd1e96d4183a460a0 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 5.3E-40 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal APT61_RS13975 49125b54c2503b8dd1e96d4183a460a0 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 2.6E-196 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 APT61_RS13975 49125b54c2503b8dd1e96d4183a460a0 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 3.9E-62 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal APT61_RS13975 49125b54c2503b8dd1e96d4183a460a0 413 PANTHER PTHR11712 3 412 6.9E-214 T 22-04-2016 APT61_RS13975 49125b54c2503b8dd1e96d4183a460a0 413 SUPERFAMILY SSF53901 215 412 4.5E-74 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS13975 49125b54c2503b8dd1e96d4183a460a0 413 PIRSF PIRSF000447 1 413 1.4E-203 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 APT61_RS13975 49125b54c2503b8dd1e96d4183a460a0 413 Gene3D G3DSA:3.40.47.10 263 412 9.3E-64 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS13975 49125b54c2503b8dd1e96d4183a460a0 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site APT61_RS13975 49125b54c2503b8dd1e96d4183a460a0 413 SMART SM00825 Beta-ketoacyl synthase 6 413 3.5E-14 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APT61_RS13975 49125b54c2503b8dd1e96d4183a460a0 413 SUPERFAMILY SSF53901 3 252 3.01E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS13975 49125b54c2503b8dd1e96d4183a460a0 413 Gene3D G3DSA:3.40.47.10 2 260 2.1E-77 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS11680 9812748f2926adc9cbc6344d67506814 681 PANTHER PTHR11804 1 679 0.0 T 22-04-2016 APT61_RS11680 9812748f2926adc9cbc6344d67506814 681 Gene3D G3DSA:1.10.1370.10 146 352 3.3E-107 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APT61_RS11680 9812748f2926adc9cbc6344d67506814 681 Gene3D G3DSA:1.10.1370.10 505 680 3.3E-107 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APT61_RS11680 9812748f2926adc9cbc6344d67506814 681 PANTHER PTHR11804:SF47 1 679 0.0 T 22-04-2016 APT61_RS11680 9812748f2926adc9cbc6344d67506814 681 Gene3D G3DSA:3.40.390.10 364 504 1.0E-50 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APT61_RS11680 9812748f2926adc9cbc6344d67506814 681 SUPERFAMILY SSF55486 12 675 2.34E-169 T 22-04-2016 APT61_RS11680 9812748f2926adc9cbc6344d67506814 681 Pfam PF01432 Peptidase family M3 230 675 1.8E-137 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 APT61_RS11680 9812748f2926adc9cbc6344d67506814 681 Gene3D G3DSA:1.20.1050.40 14 144 2.4E-16 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal APT61_RS00255 34160bc103105fa541a940dfdee44916 186 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 88 111 2.3E-23 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS00255 34160bc103105fa541a940dfdee44916 186 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 144 165 2.3E-23 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS00255 34160bc103105fa541a940dfdee44916 186 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 42 54 2.3E-23 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS00255 34160bc103105fa541a940dfdee44916 186 PANTHER PTHR35892 2 186 4.2E-51 T 22-04-2016 APT61_RS00255 34160bc103105fa541a940dfdee44916 186 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 178 186 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS00255 34160bc103105fa541a940dfdee44916 186 PANTHER PTHR35892:SF1 2 186 4.2E-51 T 22-04-2016 APT61_RS00255 34160bc103105fa541a940dfdee44916 186 Pfam PF06316 Enterobacterial Ail/Lom protein 4 186 1.2E-30 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS00255 34160bc103105fa541a940dfdee44916 186 Gene3D G3DSA:2.40.160.20 24 186 5.1E-37 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS00255 34160bc103105fa541a940dfdee44916 186 SUPERFAMILY SSF56925 26 186 8.11E-25 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS12695 39d96fe1139e97f7f28c3d699df02bc4 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 5.5E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS12695 39d96fe1139e97f7f28c3d699df02bc4 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 5.5E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS12695 39d96fe1139e97f7f28c3d699df02bc4 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.5E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS12695 39d96fe1139e97f7f28c3d699df02bc4 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 5.5E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS12695 39d96fe1139e97f7f28c3d699df02bc4 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.5E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS12695 39d96fe1139e97f7f28c3d699df02bc4 193 Gene3D G3DSA:1.10.287.990 20 82 4.5E-25 T 22-04-2016 APT61_RS12695 39d96fe1139e97f7f28c3d699df02bc4 193 PANTHER PTHR11404:SF8 1 193 7.6E-110 T 22-04-2016 APT61_RS12695 39d96fe1139e97f7f28c3d699df02bc4 193 SUPERFAMILY SSF54719 82 192 3.67E-44 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS12695 39d96fe1139e97f7f28c3d699df02bc4 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 6.7E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS12695 39d96fe1139e97f7f28c3d699df02bc4 193 SUPERFAMILY SSF46609 1 84 1.7E-35 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS12695 39d96fe1139e97f7f28c3d699df02bc4 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 8.4E-40 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS12695 39d96fe1139e97f7f28c3d699df02bc4 193 PANTHER PTHR11404 1 193 7.6E-110 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS12695 39d96fe1139e97f7f28c3d699df02bc4 193 PIRSF PIRSF000349 1 193 8.3E-86 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS12695 39d96fe1139e97f7f28c3d699df02bc4 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 133 150 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 78 87 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 38 60 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 285 299 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 263 268 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 225 234 3.6E-36 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 PANTHER PTHR11405 2 304 9.9E-148 T 22-04-2016 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 1.4E-45 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 PANTHER PTHR11405:SF16 2 304 9.9E-148 T 22-04-2016 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 269 292 3.3E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 3.3E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 259 268 3.3E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 3.3E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 302 1.6E-28 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 Gene3D G3DSA:3.40.50.1370 6 143 6.6E-53 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 6 306 38.355 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 Gene3D G3DSA:3.40.50.1370 144 291 2.3E-55 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 SUPERFAMILY SSF53671 1 305 9.3E-101 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19905 a29b9f333ac4530cae22e54e25876a4a 310 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 7 304 1.8E-123 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS05960 da9efe3762b74a93e9221f3f3b71d162 428 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APT61_RS05960 da9efe3762b74a93e9221f3f3b71d162 428 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 2.9E-102 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APT61_RS05960 da9efe3762b74a93e9221f3f3b71d162 428 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 1.2E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APT61_RS05960 da9efe3762b74a93e9221f3f3b71d162 428 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 1.2E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APT61_RS05960 da9efe3762b74a93e9221f3f3b71d162 428 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 1.2E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APT61_RS05960 da9efe3762b74a93e9221f3f3b71d162 428 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 1.2E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APT61_RS05960 da9efe3762b74a93e9221f3f3b71d162 428 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 1.2E-45 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APT61_RS05960 da9efe3762b74a93e9221f3f3b71d162 428 PANTHER PTHR11963:SF20 43 428 2.2E-261 T 22-04-2016 APT61_RS05960 da9efe3762b74a93e9221f3f3b71d162 428 SUPERFAMILY SSF53187 107 426 2.67E-104 T 22-04-2016 APT61_RS05960 da9efe3762b74a93e9221f3f3b71d162 428 Pfam PF12404 Peptidase 5 81 9.7E-32 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 APT61_RS05960 da9efe3762b74a93e9221f3f3b71d162 428 PIRSF PIRSF036388 1 428 3.6E-232 T 22-04-2016 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 APT61_RS05960 da9efe3762b74a93e9221f3f3b71d162 428 PANTHER PTHR11963 43 428 2.2E-261 T 22-04-2016 APT61_RS05960 da9efe3762b74a93e9221f3f3b71d162 428 Gene3D G3DSA:3.40.630.10 97 426 1.4E-118 T 22-04-2016 APT61_RS16435 e10533b66582d4ae9968e49cf4ae40aa 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 3.8E-29 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 APT61_RS16435 e10533b66582d4ae9968e49cf4ae40aa 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.681 T 22-04-2016 IPR007454 Uncharacterised protein family UPF0250 APT61_RS16435 e10533b66582d4ae9968e49cf4ae40aa 87 PANTHER PTHR38036 1 87 8.6E-43 T 22-04-2016 APT61_RS16435 e10533b66582d4ae9968e49cf4ae40aa 87 PANTHER PTHR38036:SF1 1 87 8.6E-43 T 22-04-2016 APT61_RS16435 e10533b66582d4ae9968e49cf4ae40aa 87 Gene3D G3DSA:3.30.70.1460 1 87 2.2E-37 T 22-04-2016 IPR027471 YbeD-like domain APT61_RS16435 e10533b66582d4ae9968e49cf4ae40aa 87 SUPERFAMILY SSF117991 1 87 1.7E-31 T 22-04-2016 IPR027471 YbeD-like domain APT61_RS02195 34305b3574625749e89e1b69cab8e498 141 Gene3D G3DSA:1.10.1660.10 1 56 2.6E-27 T 22-04-2016 APT61_RS02195 34305b3574625749e89e1b69cab8e498 141 SUPERFAMILY SSF46955 2 121 1.72E-34 T 22-04-2016 IPR009061 Putative DNA-binding domain APT61_RS02195 34305b3574625749e89e1b69cab8e498 141 PANTHER PTHR30204:SF18 1 123 2.7E-60 T 22-04-2016 APT61_RS02195 34305b3574625749e89e1b69cab8e498 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS02195 34305b3574625749e89e1b69cab8e498 141 SMART SM00422 2 71 4.2E-33 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS02195 34305b3574625749e89e1b69cab8e498 141 PANTHER PTHR30204 1 123 2.7E-60 T 22-04-2016 APT61_RS02195 34305b3574625749e89e1b69cab8e498 141 Pfam PF13411 MerR HTH family regulatory protein 2 69 8.7E-21 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS02195 34305b3574625749e89e1b69cab8e498 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.2E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS02195 34305b3574625749e89e1b69cab8e498 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.2E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS02195 34305b3574625749e89e1b69cab8e498 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 3.2E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS02195 34305b3574625749e89e1b69cab8e498 141 Gene3D G3DSA:1.10.1660.10 57 135 4.1E-32 T 22-04-2016 APT61_RS02195 34305b3574625749e89e1b69cab8e498 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 9.1E-62 T 22-04-2016 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 APT61_RS01105 3ba1fb77280aad6e366c5532c39fce91 163 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 163 46.473 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 APT61_RS01105 3ba1fb77280aad6e366c5532c39fce91 163 SMART SM00738 1 100 4.2E-33 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APT61_RS01105 3ba1fb77280aad6e366c5532c39fce91 163 SUPERFAMILY SSF82679 2 98 9.68E-28 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APT61_RS01105 3ba1fb77280aad6e366c5532c39fce91 163 Pfam PF02357 Transcription termination factor nusG 3 96 3.1E-19 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APT61_RS01105 3ba1fb77280aad6e366c5532c39fce91 163 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 160 3.7E-64 T 22-04-2016 IPR010215 Transcription antitermination protein RfaH GO:0006355 APT61_RS01105 3ba1fb77280aad6e366c5532c39fce91 163 PANTHER PTHR30265 1 163 7.7E-30 T 22-04-2016 APT61_RS01105 3ba1fb77280aad6e366c5532c39fce91 163 PANTHER PTHR30265:SF3 1 163 7.7E-30 T 22-04-2016 APT61_RS01105 3ba1fb77280aad6e366c5532c39fce91 163 Gene3D G3DSA:3.30.70.940 2 96 1.2E-17 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 SUPERFAMILY SSF53706 137 868 9.82E-113 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 SUPERFAMILY SSF53706 72 110 9.82E-113 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 Pfam PF00384 Molybdopterin oxidoreductase 242 685 3.2E-16 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 PANTHER PTHR11615 75 105 2.6E-203 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 PANTHER PTHR11615 549 756 2.6E-203 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 PANTHER PTHR11615 125 485 2.6E-203 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 PANTHER PTHR11615 794 1022 2.6E-203 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 PANTHER PTHR11615:SF136 75 105 2.6E-203 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 PANTHER PTHR11615:SF136 549 756 2.6E-203 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 PANTHER PTHR11615:SF136 125 485 2.6E-203 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 PANTHER PTHR11615:SF136 794 1022 2.6E-203 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 Gene3D G3DSA:3.40.50.740 711 731 9.6E-31 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 Gene3D G3DSA:3.40.50.740 610 679 9.6E-31 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 Gene3D G3DSA:3.40.50.740 158 260 9.6E-31 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 Gene3D G3DSA:2.20.25.90 75 157 8.1E-10 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 SMART SM00926 71 153 5.0E-11 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 Pfam PF01568 Molydopterin dinucleotide binding domain 897 990 6.0E-13 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 SUPERFAMILY SSF50692 873 999 5.2E-25 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 Gene3D G3DSA:2.40.40.20 855 1022 2.4E-25 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 Gene3D G3DSA:3.40.228.10 460 545 1.3E-41 T 22-04-2016 APT61_RS14530 3aaa2a099177ea6513b30c8216b7ea1f 1022 Gene3D G3DSA:3.40.228.10 261 375 1.3E-41 T 22-04-2016 APT61_RS10190 d4618a42b8689b7db0b11e02bd722705 479 Gene3D G3DSA:3.40.605.10 5 264 1.2E-92 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS10190 d4618a42b8689b7db0b11e02bd722705 479 Pfam PF00171 Aldehyde dehydrogenase family 19 475 7.2E-165 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS10190 d4618a42b8689b7db0b11e02bd722705 479 PANTHER PTHR11699:SF46 1 478 2.2E-209 T 22-04-2016 APT61_RS10190 d4618a42b8689b7db0b11e02bd722705 479 SUPERFAMILY SSF53720 4 477 4.58E-161 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS10190 d4618a42b8689b7db0b11e02bd722705 479 Gene3D G3DSA:3.40.309.10 265 439 1.1E-66 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS10190 d4618a42b8689b7db0b11e02bd722705 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APT61_RS10190 d4618a42b8689b7db0b11e02bd722705 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APT61_RS10190 d4618a42b8689b7db0b11e02bd722705 479 PANTHER PTHR11699 1 478 2.2E-209 T 22-04-2016 APT61_RS02965 98556f873c337497a94b6af1b473b3c8 312 PANTHER PTHR30419:SF7 2 312 2.9E-142 T 22-04-2016 APT61_RS02965 98556f873c337497a94b6af1b473b3c8 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS02965 98556f873c337497a94b6af1b473b3c8 312 SUPERFAMILY SSF53850 99 300 4.42E-31 T 22-04-2016 APT61_RS02965 98556f873c337497a94b6af1b473b3c8 312 Gene3D G3DSA:3.40.190.10 99 197 1.3E-19 T 22-04-2016 APT61_RS02965 98556f873c337497a94b6af1b473b3c8 312 Gene3D G3DSA:1.10.10.10 8 88 6.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS02965 98556f873c337497a94b6af1b473b3c8 312 Gene3D G3DSA:3.40.190.10 198 268 2.5E-8 T 22-04-2016 APT61_RS02965 98556f873c337497a94b6af1b473b3c8 312 Pfam PF03466 LysR substrate binding domain 99 296 5.4E-32 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS02965 98556f873c337497a94b6af1b473b3c8 312 SUPERFAMILY SSF46785 8 112 1.93E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS02965 98556f873c337497a94b6af1b473b3c8 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 7.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS02965 98556f873c337497a94b6af1b473b3c8 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 7.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS02965 98556f873c337497a94b6af1b473b3c8 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 7.5E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS02965 98556f873c337497a94b6af1b473b3c8 312 PANTHER PTHR30419 2 312 2.9E-142 T 22-04-2016 APT61_RS01440 f6ba5bc4b676eb89ef03edb0d366c1f8 80 PANTHER PTHR33279:SF5 8 80 1.4E-46 T 22-04-2016 APT61_RS01440 f6ba5bc4b676eb89ef03edb0d366c1f8 80 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 22-04-2016 IPR001455 TusA-like domain APT61_RS01440 f6ba5bc4b676eb89ef03edb0d366c1f8 80 PANTHER PTHR33279 8 80 1.4E-46 T 22-04-2016 APT61_RS01440 f6ba5bc4b676eb89ef03edb0d366c1f8 80 SUPERFAMILY SSF64307 4 80 5.1E-26 T 22-04-2016 IPR001455 TusA-like domain APT61_RS01440 f6ba5bc4b676eb89ef03edb0d366c1f8 80 Pfam PF01206 Sulfurtransferase TusA 10 79 1.9E-24 T 22-04-2016 IPR001455 TusA-like domain APT61_RS01440 f6ba5bc4b676eb89ef03edb0d366c1f8 80 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 80 27.122 T 22-04-2016 IPR022931 Sulphurtransferase TusA GO:0016783 APT61_RS01440 f6ba5bc4b676eb89ef03edb0d366c1f8 80 Gene3D G3DSA:3.30.110.40 5 80 6.1E-30 T 22-04-2016 IPR001455 TusA-like domain APT61_RS00345 962584b9d9aa6262185e518206efe727 804 SUPERFAMILY SSF50692 618 648 7.05E-44 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS00345 962584b9d9aa6262185e518206efe727 804 SUPERFAMILY SSF50692 675 804 7.05E-44 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS00345 962584b9d9aa6262185e518206efe727 804 PANTHER PTHR11615 574 647 0.0 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 PANTHER PTHR11615 668 804 0.0 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 PANTHER PTHR11615 1 182 0.0 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 PANTHER PTHR11615 397 481 0.0 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 PANTHER PTHR11615 286 380 0.0 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 PANTHER PTHR11615 210 247 0.0 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 SUPERFAMILY SSF53706 1 639 3.27E-229 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 803 0.0 T 22-04-2016 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 PANTHER PTHR11615:SF149 574 647 0.0 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 PANTHER PTHR11615:SF149 668 804 0.0 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 PANTHER PTHR11615:SF149 1 182 0.0 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 PANTHER PTHR11615:SF149 397 481 0.0 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 PANTHER PTHR11615:SF149 286 380 0.0 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 PANTHER PTHR11615:SF149 210 247 0.0 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 Gene3D G3DSA:2.40.40.20 607 804 1.4E-50 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 Gene3D G3DSA:3.40.228.10 152 261 4.6E-70 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 Gene3D G3DSA:3.40.228.10 1 108 4.6E-70 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 Gene3D G3DSA:3.40.50.740 320 470 6.5E-60 T 22-04-2016 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 Pfam PF01568 Molydopterin dinucleotide binding domain 682 797 2.0E-17 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS00345 962584b9d9aa6262185e518206efe727 804 Pfam PF00384 Molybdopterin oxidoreductase 2 377 4.6E-21 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 Gene3D G3DSA:3.10.20.30 238 352 1.7E-33 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 SUPERFAMILY SSF54292 234 350 4.45E-29 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 SUPERFAMILY SSF63380 2 107 1.36E-22 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 PRINTS PR00406 Cytochrome B5 reductase signature 91 105 1.6E-7 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 PRINTS PR00406 Cytochrome B5 reductase signature 212 220 1.6E-7 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 PRINTS PR00406 Cytochrome B5 reductase signature 116 135 1.6E-7 T 22-04-2016 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 55 62 7.4E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 36 46 7.4E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 212 220 7.4E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 116 135 7.4E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 141 150 7.4E-8 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 SUPERFAMILY SSF52343 94 242 3.01E-31 T 22-04-2016 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 PANTHER PTHR19370 4 264 2.0E-157 T 22-04-2016 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 Gene3D G3DSA:2.40.30.10 2 94 5.9E-24 T 22-04-2016 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 PANTHER PTHR19370:SF93 4 264 2.0E-157 T 22-04-2016 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 Gene3D G3DSA:3.40.50.80 95 237 3.9E-36 T 22-04-2016 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 Pfam PF00175 Oxidoreductase NAD-binding domain 118 225 1.3E-17 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 Pfam PF00970 Oxidoreductase FAD-binding domain 7 105 3.4E-13 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 299 307 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 TIGRFAM TIGR02160 PA_CoA_Oxy5: phenylacetate-CoA oxygenase/reductase, PaaK subunit 4 351 1.3E-167 T 22-04-2016 IPR011884 Phenylacetate-CoA oxygenase/reductase, PaaK subunit GO:0010124 KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00930 APT61_RS10045 2f4e6bd55630b10a4677d56ba6adff3d 356 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 268 341 8.9E-17 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS17105 bcbe55a528b42a8a69a37fab955f3117 320 Gene3D G3DSA:3.40.50.1400 4 201 4.5E-66 T 22-04-2016 APT61_RS17105 bcbe55a528b42a8a69a37fab955f3117 320 SUPERFAMILY SSF53800 4 318 3.79E-101 T 22-04-2016 APT61_RS17105 bcbe55a528b42a8a69a37fab955f3117 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 22-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APT61_RS17105 bcbe55a528b42a8a69a37fab955f3117 320 TIGRFAM TIGR00109 hemH: ferrochelatase 1 319 4.9E-121 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APT61_RS17105 bcbe55a528b42a8a69a37fab955f3117 320 Gene3D G3DSA:3.40.50.1400 202 318 1.0E-33 T 22-04-2016 APT61_RS17105 bcbe55a528b42a8a69a37fab955f3117 320 PANTHER PTHR11108 1 316 3.2E-135 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APT61_RS17105 bcbe55a528b42a8a69a37fab955f3117 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 38.366 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APT61_RS17105 bcbe55a528b42a8a69a37fab955f3117 320 Pfam PF00762 Ferrochelatase 5 318 9.6E-110 T 22-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 APT61_RS12885 6b4e441295bc76f5cf8d20d0f9b73288 138 PANTHER PTHR12735 1 138 2.8E-64 T 22-04-2016 APT61_RS12885 6b4e441295bc76f5cf8d20d0f9b73288 138 Gene3D G3DSA:3.90.1010.10 2 136 1.4E-51 T 22-04-2016 APT61_RS12885 6b4e441295bc76f5cf8d20d0f9b73288 138 PANTHER PTHR12735:SF26 1 138 2.8E-64 T 22-04-2016 APT61_RS12885 6b4e441295bc76f5cf8d20d0f9b73288 138 Pfam PF02657 Fe-S metabolism associated domain 12 132 5.9E-43 T 22-04-2016 IPR003808 Fe-S metabolism associated domain, SufE-like UniPathway: UPA00266 APT61_RS12885 6b4e441295bc76f5cf8d20d0f9b73288 138 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 41.865 T 22-04-2016 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 UniPathway: UPA00266 APT61_RS12885 6b4e441295bc76f5cf8d20d0f9b73288 138 SUPERFAMILY SSF82649 3 136 1.26E-44 T 22-04-2016 APT61_RS22035 b7e322561dc31f9e77dd84cc168564a2 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 1.1E-31 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APT61_RS22035 b7e322561dc31f9e77dd84cc168564a2 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 6.5E-68 T 22-04-2016 IPR023214 HAD-like domain APT61_RS22035 b7e322561dc31f9e77dd84cc168564a2 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 22-04-2016 APT61_RS22035 b7e322561dc31f9e77dd84cc168564a2 270 Gene3D G3DSA:3.30.1240.10 88 183 8.2E-42 T 22-04-2016 APT61_RS22035 b7e322561dc31f9e77dd84cc168564a2 270 SUPERFAMILY SSF56784 1 269 2.07E-76 T 22-04-2016 IPR023214 HAD-like domain APT61_RS22035 b7e322561dc31f9e77dd84cc168564a2 270 PANTHER PTHR10000:SF29 1 270 1.3E-163 T 22-04-2016 APT61_RS22035 b7e322561dc31f9e77dd84cc168564a2 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 4.4E-75 T 22-04-2016 IPR000150 Cof protein GO:0016787 APT61_RS22035 b7e322561dc31f9e77dd84cc168564a2 270 Gene3D G3DSA:3.40.50.1000 184 269 1.4E-60 T 22-04-2016 IPR023214 HAD-like domain APT61_RS22035 b7e322561dc31f9e77dd84cc168564a2 270 Gene3D G3DSA:3.40.50.1000 1 76 1.4E-60 T 22-04-2016 IPR023214 HAD-like domain APT61_RS22035 b7e322561dc31f9e77dd84cc168564a2 270 PANTHER PTHR10000 1 270 1.3E-163 T 22-04-2016 APT61_RS22035 b7e322561dc31f9e77dd84cc168564a2 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 22-04-2016 IPR000150 Cof protein GO:0016787 APT61_RS07590 cdd0282ac4f9efb6d82b4030bc04f6e8 241 Pfam PF00072 Response regulator receiver domain 13 121 1.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS07590 cdd0282ac4f9efb6d82b4030bc04f6e8 241 Gene3D G3DSA:3.40.50.2300 9 156 1.0E-38 T 22-04-2016 APT61_RS07590 cdd0282ac4f9efb6d82b4030bc04f6e8 241 Gene3D G3DSA:1.10.10.10 157 235 8.5E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS07590 cdd0282ac4f9efb6d82b4030bc04f6e8 241 SUPERFAMILY SSF52172 6 137 6.55E-39 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS07590 cdd0282ac4f9efb6d82b4030bc04f6e8 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 231 2.7E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS07590 cdd0282ac4f9efb6d82b4030bc04f6e8 241 PANTHER PTHR26402:SF530 11 235 2.1E-136 T 22-04-2016 APT61_RS07590 cdd0282ac4f9efb6d82b4030bc04f6e8 241 SUPERFAMILY SSF46894 142 234 7.94E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS07590 cdd0282ac4f9efb6d82b4030bc04f6e8 241 PANTHER PTHR26402 11 235 2.1E-136 T 22-04-2016 APT61_RS07590 cdd0282ac4f9efb6d82b4030bc04f6e8 241 SMART SM00862 156 232 8.7E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS07590 cdd0282ac4f9efb6d82b4030bc04f6e8 241 SMART SM00448 11 121 1.3E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS09195 6c50c792994afb6cc98f8aae1ca867fd 276 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 275 46.691 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APT61_RS09195 6c50c792994afb6cc98f8aae1ca867fd 276 PANTHER PTHR18895:SF64 1 271 1.2E-118 T 22-04-2016 APT61_RS09195 6c50c792994afb6cc98f8aae1ca867fd 276 SUPERFAMILY SSF53335 4 272 3.08E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS09195 6c50c792994afb6cc98f8aae1ca867fd 276 Gene3D G3DSA:1.10.8.10 1 84 4.6E-31 T 22-04-2016 APT61_RS09195 6c50c792994afb6cc98f8aae1ca867fd 276 Gene3D G3DSA:3.40.50.150 87 273 4.6E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS09195 6c50c792994afb6cc98f8aae1ca867fd 276 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APT61_RS09195 6c50c792994afb6cc98f8aae1ca867fd 276 PANTHER PTHR18895 1 271 1.2E-118 T 22-04-2016 APT61_RS09195 6c50c792994afb6cc98f8aae1ca867fd 276 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 1.2E-92 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 APT61_RS09195 6c50c792994afb6cc98f8aae1ca867fd 276 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 273 6.4E-93 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 APT61_RS09195 6c50c792994afb6cc98f8aae1ca867fd 276 Pfam PF05175 Methyltransferase small domain 105 190 8.8E-18 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APT61_RS02325 7b382253d5afeb8cad41c8731bdd34cd 379 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 58 287 4.8E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT61_RS02325 7b382253d5afeb8cad41c8731bdd34cd 379 PANTHER PTHR30158:SF4 1 372 3.1E-239 T 22-04-2016 APT61_RS02325 7b382253d5afeb8cad41c8731bdd34cd 379 SUPERFAMILY SSF111369 50 294 1.23E-86 T 22-04-2016 APT61_RS02325 7b382253d5afeb8cad41c8731bdd34cd 379 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 38 369 4.4E-82 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APT61_RS02325 7b382253d5afeb8cad41c8731bdd34cd 379 PANTHER PTHR30158 1 372 3.1E-239 T 22-04-2016 APT61_RS02325 7b382253d5afeb8cad41c8731bdd34cd 379 Gene3D G3DSA:2.40.50.100 171 206 9.3E-27 T 22-04-2016 APT61_RS02325 7b382253d5afeb8cad41c8731bdd34cd 379 Gene3D G3DSA:2.40.50.100 63 96 9.3E-27 T 22-04-2016 APT61_RS02325 7b382253d5afeb8cad41c8731bdd34cd 379 Pfam PF00529 HlyD membrane-fusion protein of T1SS 156 354 1.9E-11 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APT61_RS08020 8bd56f0e935e7b51248c88a11330bf2e 562 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 391 557 1.8E-59 T 22-04-2016 IPR000160 GGDEF domain APT61_RS08020 8bd56f0e935e7b51248c88a11330bf2e 562 Pfam PF00990 Diguanylate cyclase, GGDEF domain 395 554 3.7E-48 T 22-04-2016 IPR000160 GGDEF domain APT61_RS08020 8bd56f0e935e7b51248c88a11330bf2e 562 PANTHER PTHR10799 432 556 4.2E-24 T 22-04-2016 APT61_RS08020 8bd56f0e935e7b51248c88a11330bf2e 562 SMART SM00267 384 558 3.4E-66 T 22-04-2016 IPR000160 GGDEF domain APT61_RS08020 8bd56f0e935e7b51248c88a11330bf2e 562 Gene3D G3DSA:3.30.70.270 397 558 1.0E-52 T 22-04-2016 APT61_RS08020 8bd56f0e935e7b51248c88a11330bf2e 562 Pfam PF17151 Periplasmic sensor domain 39 222 6.2E-64 T 22-04-2016 IPR033416 Periplasmic sensor domain CHASE7 UniPathway: UPA00694 APT61_RS08020 8bd56f0e935e7b51248c88a11330bf2e 562 SUPERFAMILY SSF55073 400 557 3.3E-45 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS11760 7ea6b0707c90c3b81c77d05ff44041b2 199 Gene3D G3DSA:1.10.3480.10 2 199 1.0E-61 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APT61_RS11760 7ea6b0707c90c3b81c77d05ff44041b2 199 PANTHER PTHR34227:SF5 1 199 4.0E-82 T 22-04-2016 APT61_RS11760 7ea6b0707c90c3b81c77d05ff44041b2 199 Pfam PF02613 Nitrate reductase delta subunit 43 158 8.6E-25 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APT61_RS11760 7ea6b0707c90c3b81c77d05ff44041b2 199 PANTHER PTHR34227 1 199 4.0E-82 T 22-04-2016 APT61_RS11760 7ea6b0707c90c3b81c77d05ff44041b2 199 PIRSF PIRSF004690 1 199 1.6E-62 T 22-04-2016 IPR026269 Tat proofreading chaperone DmsD-type APT61_RS11760 7ea6b0707c90c3b81c77d05ff44041b2 199 SUPERFAMILY SSF89155 2 198 8.11E-58 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APT61_RS11760 7ea6b0707c90c3b81c77d05ff44041b2 199 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 1 199 41.845 T 22-04-2016 IPR028611 Tat proofreading chaperone DmsD GO:0005048 APT61_RS00820 830de6493827b22a32b49fd7a4456751 93 PANTHER PTHR10657 7 92 1.2E-33 T 22-04-2016 APT61_RS00820 830de6493827b22a32b49fd7a4456751 93 Gene3D G3DSA:3.10.50.40 3 92 6.0E-32 T 22-04-2016 APT61_RS00820 830de6493827b22a32b49fd7a4456751 93 Pfam PF13616 PPIC-type PPIASE domain 14 90 5.0E-21 T 22-04-2016 APT61_RS00820 830de6493827b22a32b49fd7a4456751 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APT61_RS00820 830de6493827b22a32b49fd7a4456751 93 SUPERFAMILY SSF54534 5 90 3.53E-26 T 22-04-2016 APT61_RS15835 063ad86d9b2826813e78d98132383c47 235 PANTHER PTHR24220:SF404 3 221 3.2E-65 T 22-04-2016 APT61_RS15835 063ad86d9b2826813e78d98132383c47 235 Pfam PF00005 ABC transporter 19 159 3.4E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15835 063ad86d9b2826813e78d98132383c47 235 PANTHER PTHR24220 3 221 3.2E-65 T 22-04-2016 APT61_RS15835 063ad86d9b2826813e78d98132383c47 235 Gene3D G3DSA:3.40.50.300 1 219 4.7E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15835 063ad86d9b2826813e78d98132383c47 235 SMART SM00382 26 209 7.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15835 063ad86d9b2826813e78d98132383c47 235 SUPERFAMILY SSF52540 2 220 2.01E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10850 913922484871eb9983fae9689f966cbb 307 Gene3D G3DSA:1.10.3720.10 49 274 4.9E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10850 913922484871eb9983fae9689f966cbb 307 SUPERFAMILY SSF161098 52 259 1.15E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10850 913922484871eb9983fae9689f966cbb 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 273 1.3E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10850 913922484871eb9983fae9689f966cbb 307 PANTHER PTHR30450 38 282 5.7E-65 T 22-04-2016 APT61_RS10850 913922484871eb9983fae9689f966cbb 307 PANTHER PTHR30450:SF2 38 282 5.7E-65 T 22-04-2016 APT61_RS10850 913922484871eb9983fae9689f966cbb 307 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 53 168 3.7E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 Pfam PF00381 PTS HPr component phosphorylation site 287 368 8.8E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 PANTHER PTHR30181 2 376 8.0E-184 T 22-04-2016 APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 PRINTS PR00107 Phosphocarrier protein signature 340 357 1.6E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 PRINTS PR00107 Phosphocarrier protein signature 325 340 1.6E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 PRINTS PR00107 Phosphocarrier protein signature 297 313 1.6E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 SUPERFAMILY SSF55804 2 140 4.19E-39 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 Gene3D G3DSA:3.30.1340.10 287 374 5.1E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 SUPERFAMILY SSF55804 150 276 6.8E-10 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 286 368 2.0E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 PANTHER PTHR30181:SF3 2 376 8.0E-184 T 22-04-2016 APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 Gene3D G3DSA:3.40.930.10 5 141 4.8E-39 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 Gene3D G3DSA:3.40.930.10 150 278 2.1E-8 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 SUPERFAMILY SSF55594 286 374 3.93E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS07190 65eaf77ee00bc376fc023f419e1c03a3 376 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 139 2.3E-28 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS22010 dfd8e0d66c981e704cb4c0e69fa41887 553 Gene3D G3DSA:3.30.70.1450 214 278 6.5E-5 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS22010 dfd8e0d66c981e704cb4c0e69fa41887 553 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 553 56.355 T 22-04-2016 IPR023018 Transport protein YidE, putative APT61_RS22010 dfd8e0d66c981e704cb4c0e69fa41887 553 Gene3D G3DSA:3.30.70.1450 288 360 3.2E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS22010 dfd8e0d66c981e704cb4c0e69fa41887 553 Pfam PF06826 Predicted Permease Membrane Region 374 546 1.6E-46 T 22-04-2016 IPR006512 YidE/YbjL duplication APT61_RS22010 dfd8e0d66c981e704cb4c0e69fa41887 553 Pfam PF06826 Predicted Permease Membrane Region 11 179 3.2E-41 T 22-04-2016 IPR006512 YidE/YbjL duplication APT61_RS22010 dfd8e0d66c981e704cb4c0e69fa41887 553 SUPERFAMILY SSF116726 207 271 3.4E-7 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS22010 dfd8e0d66c981e704cb4c0e69fa41887 553 PANTHER PTHR30445:SF1 1 550 1.8E-272 T 22-04-2016 APT61_RS22010 dfd8e0d66c981e704cb4c0e69fa41887 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 9.3E-49 T 22-04-2016 IPR006512 YidE/YbjL duplication APT61_RS22010 dfd8e0d66c981e704cb4c0e69fa41887 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 7.6E-38 T 22-04-2016 IPR006512 YidE/YbjL duplication APT61_RS22010 dfd8e0d66c981e704cb4c0e69fa41887 553 PANTHER PTHR30445 1 550 1.8E-272 T 22-04-2016 APT61_RS22010 dfd8e0d66c981e704cb4c0e69fa41887 553 SUPERFAMILY SSF116726 285 360 1.16E-12 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS22010 dfd8e0d66c981e704cb4c0e69fa41887 553 Pfam PF02080 TrkA-C domain 291 358 6.8E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS02070 54b698fd531c7665bf062c469f78409b 100 SUPERFAMILY SSF54189 6 97 3.02E-30 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02070 54b698fd531c7665bf062c469f78409b 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 22-04-2016 IPR001014 Ribosomal protein L23/L25, conserved site APT61_RS02070 54b698fd531c7665bf062c469f78409b 100 Pfam PF00276 Ribosomal protein L23 9 95 5.8E-31 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APT61_RS02070 54b698fd531c7665bf062c469f78409b 100 Gene3D G3DSA:3.30.70.330 6 98 3.5E-34 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 APT61_RS02070 54b698fd531c7665bf062c469f78409b 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 APT61_RS02070 54b698fd531c7665bf062c469f78409b 100 PANTHER PTHR11620 9 95 3.6E-33 T 22-04-2016 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 SUPERFAMILY SSF53697 5 548 6.67E-226 T 22-04-2016 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 PANTHER PTHR11469:SF11 1 549 0.0 T 22-04-2016 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 Pfam PF00342 Phosphoglucose isomerase 52 541 2.3E-254 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 PANTHER PTHR11469 1 549 0.0 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 Gene3D G3DSA:3.40.50.10490 8 98 5.9E-147 T 22-04-2016 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 Gene3D G3DSA:3.40.50.10490 293 506 5.9E-147 T 22-04-2016 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.888 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 Gene3D G3DSA:1.10.1390.10 507 548 5.8E-22 T 22-04-2016 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 2.3E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 2.3E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 2.3E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 2.3E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 2.3E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 2.3E-55 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS21005 1f40242aaa6dc58f7226b30fd26481b8 549 Gene3D G3DSA:3.40.50.10490 99 290 1.7E-91 T 22-04-2016 APT61_RS10140 7463b25c96e623d267b233f9fdfd7fc0 112 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 101 4.8E-17 T 22-04-2016 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 APT61_RS10140 7463b25c96e623d267b233f9fdfd7fc0 112 SUPERFAMILY SSF52091 1 108 1.06E-23 T 22-04-2016 IPR002645 STAS domain APT61_RS10140 7463b25c96e623d267b233f9fdfd7fc0 112 PANTHER PTHR33495 1 109 2.3E-21 T 22-04-2016 APT61_RS10140 7463b25c96e623d267b233f9fdfd7fc0 112 Pfam PF01740 STAS domain 3 103 3.8E-15 T 22-04-2016 IPR002645 STAS domain APT61_RS10140 7463b25c96e623d267b233f9fdfd7fc0 112 Gene3D G3DSA:3.30.750.24 1 110 2.1E-28 T 22-04-2016 IPR002645 STAS domain APT61_RS22200 4830922e4811d02ff86fbcc0e966e113 460 Gene3D G3DSA:2.40.10.170 2 75 1.3E-30 T 22-04-2016 APT61_RS22200 4830922e4811d02ff86fbcc0e966e113 460 PANTHER PTHR15184 1 460 0.0 T 22-04-2016 APT61_RS22200 4830922e4811d02ff86fbcc0e966e113 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22200 4830922e4811d02ff86fbcc0e966e113 460 SMART SM00382 142 327 4.2E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS22200 4830922e4811d02ff86fbcc0e966e113 460 SUPERFAMILY SSF47917 345 459 1.1E-54 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22200 4830922e4811d02ff86fbcc0e966e113 460 Gene3D G3DSA:1.10.1140.10 345 460 1.2E-57 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22200 4830922e4811d02ff86fbcc0e966e113 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 2.6E-21 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22200 4830922e4811d02ff86fbcc0e966e113 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 57.103 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22200 4830922e4811d02ff86fbcc0e966e113 460 PANTHER PTHR15184:SF44 1 460 0.0 T 22-04-2016 APT61_RS22200 4830922e4811d02ff86fbcc0e966e113 460 Gene3D G3DSA:3.40.50.300 77 343 6.5E-110 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS22200 4830922e4811d02ff86fbcc0e966e113 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 3.3E-263 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22200 4830922e4811d02ff86fbcc0e966e113 460 SUPERFAMILY SSF50615 1 75 8.37E-25 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22200 4830922e4811d02ff86fbcc0e966e113 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 5.3E-64 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22200 4830922e4811d02ff86fbcc0e966e113 460 SUPERFAMILY SSF52540 77 348 5.44E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17750 3d60caaebf1a32cb574b27317421a77d 348 Gene3D G3DSA:3.90.180.10 1 179 9.8E-59 T 22-04-2016 IPR011032 GroES-like APT61_RS17750 3d60caaebf1a32cb574b27317421a77d 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APT61_RS17750 3d60caaebf1a32cb574b27317421a77d 348 PANTHER PTHR11695 15 345 4.4E-154 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS17750 3d60caaebf1a32cb574b27317421a77d 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 142 2.8E-24 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APT61_RS17750 3d60caaebf1a32cb574b27317421a77d 348 Pfam PF00107 Zinc-binding dehydrogenase 185 308 1.1E-23 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APT61_RS17750 3d60caaebf1a32cb574b27317421a77d 348 SUPERFAMILY SSF51735 150 312 2.12E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS17750 3d60caaebf1a32cb574b27317421a77d 348 SUPERFAMILY SSF50129 8 171 1.48E-45 T 22-04-2016 IPR011032 GroES-like APT61_RS17750 3d60caaebf1a32cb574b27317421a77d 348 Gene3D G3DSA:3.40.50.720 180 292 1.7E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS17750 3d60caaebf1a32cb574b27317421a77d 348 SMART SM00829 11 342 9.9E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APT61_RS17750 3d60caaebf1a32cb574b27317421a77d 348 PANTHER PTHR11695:SF261 15 345 4.4E-154 T 22-04-2016 APT61_RS02310 934af41e781cce2f8a0bf6150e428528 341 PANTHER PTHR30085 1 310 7.9E-189 T 22-04-2016 APT61_RS02310 934af41e781cce2f8a0bf6150e428528 341 PANTHER PTHR30085:SF5 1 310 7.9E-189 T 22-04-2016 APT61_RS02310 934af41e781cce2f8a0bf6150e428528 341 Gene3D G3DSA:3.40.190.10 33 127 3.3E-19 T 22-04-2016 APT61_RS02310 934af41e781cce2f8a0bf6150e428528 341 Gene3D G3DSA:3.40.190.10 225 251 3.3E-19 T 22-04-2016 APT61_RS02310 934af41e781cce2f8a0bf6150e428528 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 253 1.2E-32 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS02310 934af41e781cce2f8a0bf6150e428528 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APT61_RS02310 934af41e781cce2f8a0bf6150e428528 341 SMART SM00062 36 265 1.4E-59 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS02310 934af41e781cce2f8a0bf6150e428528 341 Gene3D G3DSA:3.40.190.10 128 224 8.3E-16 T 22-04-2016 APT61_RS02310 934af41e781cce2f8a0bf6150e428528 341 SUPERFAMILY SSF53850 27 256 1.15E-48 T 22-04-2016 APT61_RS10535 a8fa7ac58949679c395199b5a0043e38 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10535 a8fa7ac58949679c395199b5a0043e38 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10535 a8fa7ac58949679c395199b5a0043e38 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10535 a8fa7ac58949679c395199b5a0043e38 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 3.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10535 a8fa7ac58949679c395199b5a0043e38 280 SUPERFAMILY SSF46785 4 80 3.16E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10535 a8fa7ac58949679c395199b5a0043e38 280 Gene3D G3DSA:1.10.10.10 3 82 1.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10535 a8fa7ac58949679c395199b5a0043e38 280 SUPERFAMILY SSF53850 98 278 1.01E-21 T 22-04-2016 APT61_RS10535 a8fa7ac58949679c395199b5a0043e38 280 Gene3D G3DSA:3.40.190.10 165 249 3.2E-19 T 22-04-2016 APT61_RS10535 a8fa7ac58949679c395199b5a0043e38 280 Pfam PF03466 LysR substrate binding domain 91 277 3.9E-21 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS10535 a8fa7ac58949679c395199b5a0043e38 280 PANTHER PTHR30537 1 278 2.5E-64 T 22-04-2016 APT61_RS10535 a8fa7ac58949679c395199b5a0043e38 280 PANTHER PTHR30537:SF26 1 278 2.5E-64 T 22-04-2016 APT61_RS10535 a8fa7ac58949679c395199b5a0043e38 280 Gene3D G3DSA:3.40.190.10 98 164 1.7E-12 T 22-04-2016 APT61_RS03830 497ef12e11cc51ac7a50e7d47ba03f58 281 PANTHER PTHR30465:SF2 1 279 2.0E-119 T 22-04-2016 APT61_RS03830 497ef12e11cc51ac7a50e7d47ba03f58 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 276 4.8E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS03830 497ef12e11cc51ac7a50e7d47ba03f58 281 SUPERFAMILY SSF161098 74 259 5.63E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS03830 497ef12e11cc51ac7a50e7d47ba03f58 281 Gene3D G3DSA:1.10.3720.10 69 274 4.7E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS03830 497ef12e11cc51ac7a50e7d47ba03f58 281 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 4 54 1.3E-8 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT61_RS03830 497ef12e11cc51ac7a50e7d47ba03f58 281 PANTHER PTHR30465 1 279 2.0E-119 T 22-04-2016 APT61_RS09920 4dc25944294a4de23afdc8acf12c6a6b 410 Gene3D G3DSA:3.30.70.270 255 408 2.5E-48 T 22-04-2016 APT61_RS09920 4dc25944294a4de23afdc8acf12c6a6b 410 PANTHER PTHR10799:SF750 287 407 1.2E-28 T 22-04-2016 APT61_RS09920 4dc25944294a4de23afdc8acf12c6a6b 410 SUPERFAMILY SSF55073 258 408 2.43E-44 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS09920 4dc25944294a4de23afdc8acf12c6a6b 410 Pfam PF00990 Diguanylate cyclase, GGDEF domain 253 406 1.8E-44 T 22-04-2016 IPR000160 GGDEF domain APT61_RS09920 4dc25944294a4de23afdc8acf12c6a6b 410 SUPERFAMILY SSF55785 149 250 2.42E-15 T 22-04-2016 IPR000014 PAS domain APT61_RS09920 4dc25944294a4de23afdc8acf12c6a6b 410 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 127 249 2.3E-14 T 22-04-2016 IPR000014 PAS domain APT61_RS09920 4dc25944294a4de23afdc8acf12c6a6b 410 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 249 408 4.7E-46 T 22-04-2016 IPR000160 GGDEF domain APT61_RS09920 4dc25944294a4de23afdc8acf12c6a6b 410 Pfam PF08448 PAS fold 148 244 4.8E-7 T 22-04-2016 IPR013656 PAS fold-4 APT61_RS09920 4dc25944294a4de23afdc8acf12c6a6b 410 Gene3D G3DSA:3.30.450.20 125 240 2.1E-12 T 22-04-2016 APT61_RS09920 4dc25944294a4de23afdc8acf12c6a6b 410 SMART SM00267 242 410 4.5E-66 T 22-04-2016 IPR000160 GGDEF domain APT61_RS09920 4dc25944294a4de23afdc8acf12c6a6b 410 PANTHER PTHR10799 287 407 1.2E-28 T 22-04-2016 APT61_RS09920 4dc25944294a4de23afdc8acf12c6a6b 410 SMART SM00091 129 198 0.0071 T 22-04-2016 IPR000014 PAS domain APT61_RS12145 3d39f2a35793b483b57d03727269cd99 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS12145 3d39f2a35793b483b57d03727269cd99 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12145 3d39f2a35793b483b57d03727269cd99 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12145 3d39f2a35793b483b57d03727269cd99 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.2E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12145 3d39f2a35793b483b57d03727269cd99 240 Gene3D G3DSA:3.40.50.720 9 237 1.8E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS12145 3d39f2a35793b483b57d03727269cd99 240 PANTHER PTHR24322 152 186 4.7E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12145 3d39f2a35793b483b57d03727269cd99 240 PANTHER PTHR24322 11 136 4.7E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12145 3d39f2a35793b483b57d03727269cd99 240 SUPERFAMILY SSF51735 9 237 8.49E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS12145 3d39f2a35793b483b57d03727269cd99 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 236 6.8E-23 T 22-04-2016 APT61_RS11450 0e222aa4250b657bfdbd91d35173b224 174 Gene3D G3DSA:3.40.630.30 16 174 1.6E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS11450 0e222aa4250b657bfdbd91d35173b224 174 PANTHER PTHR23091 17 163 1.1E-12 T 22-04-2016 APT61_RS11450 0e222aa4250b657bfdbd91d35173b224 174 SUPERFAMILY SSF55729 9 173 3.54E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS11450 0e222aa4250b657bfdbd91d35173b224 174 Pfam PF13673 Acetyltransferase (GNAT) domain 57 152 3.1E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS13065 89d9a67d8267afc51d554ac3fa3b6f88 286 Pfam PF03881 Fructosamine kinase 1 285 7.0E-113 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase APT61_RS13065 89d9a67d8267afc51d554ac3fa3b6f88 286 Gene3D G3DSA:3.90.1200.10 98 259 3.2E-13 T 22-04-2016 APT61_RS13065 89d9a67d8267afc51d554ac3fa3b6f88 286 PANTHER PTHR12149 1 285 1.6E-112 T 22-04-2016 APT61_RS13065 89d9a67d8267afc51d554ac3fa3b6f88 286 Gene3D G3DSA:3.30.200.20 32 90 8.5E-5 T 22-04-2016 APT61_RS13065 89d9a67d8267afc51d554ac3fa3b6f88 286 PIRSF PIRSF006221 1 286 5.7E-92 T 22-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase APT61_RS13065 89d9a67d8267afc51d554ac3fa3b6f88 286 SUPERFAMILY SSF56112 4 280 9.92E-39 T 22-04-2016 IPR011009 Protein kinase-like domain APT61_RS13065 89d9a67d8267afc51d554ac3fa3b6f88 286 PANTHER PTHR12149:SF8 1 285 1.6E-112 T 22-04-2016 APT61_RS08685 cd8ba6187506439aabf2eae02d59fc99 315 Pfam PF04393 Protein of unknown function (DUF535) 32 310 7.0E-95 T 22-04-2016 IPR007488 Protein of unknown function DUF535 APT61_RS08685 cd8ba6187506439aabf2eae02d59fc99 315 PANTHER PTHR38785 1 315 9.2E-86 T 22-04-2016 APT61_RS06480 edd492b40d11f835efc9573b40cbb2f6 245 PANTHER PTHR26402:SF472 1 184 2.6E-48 T 22-04-2016 APT61_RS06480 edd492b40d11f835efc9573b40cbb2f6 245 SMART SM00850 146 244 2.2E-36 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APT61_RS06480 edd492b40d11f835efc9573b40cbb2f6 245 Pfam PF00072 Response regulator receiver domain 3 112 5.2E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS06480 edd492b40d11f835efc9573b40cbb2f6 245 Pfam PF04397 LytTr DNA-binding domain 147 243 1.3E-31 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APT61_RS06480 edd492b40d11f835efc9573b40cbb2f6 245 Gene3D G3DSA:2.20.25.10 207 245 5.2E-14 T 22-04-2016 APT61_RS06480 edd492b40d11f835efc9573b40cbb2f6 245 Gene3D G3DSA:3.40.50.2300 1 124 6.1E-31 T 22-04-2016 APT61_RS06480 edd492b40d11f835efc9573b40cbb2f6 245 PANTHER PTHR26402 1 184 2.6E-48 T 22-04-2016 APT61_RS06480 edd492b40d11f835efc9573b40cbb2f6 245 Gene3D G3DSA:2.40.50.40 137 205 4.0E-23 T 22-04-2016 APT61_RS06480 edd492b40d11f835efc9573b40cbb2f6 245 SUPERFAMILY SSF52172 1 154 4.84E-27 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS06480 edd492b40d11f835efc9573b40cbb2f6 245 SMART SM00448 1 112 2.3E-22 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS19280 8a97ac26fff8481fea76387e6f397e88 245 Gene3D G3DSA:3.40.50.300 51 222 3.8E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19280 8a97ac26fff8481fea76387e6f397e88 245 SUPERFAMILY SSF52540 64 229 1.57E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19280 8a97ac26fff8481fea76387e6f397e88 245 PANTHER PTHR30050:SF9 1 240 2.4E-182 T 22-04-2016 APT61_RS19280 8a97ac26fff8481fea76387e6f397e88 245 PANTHER PTHR30050 1 240 2.4E-182 T 22-04-2016 APT61_RS19280 8a97ac26fff8481fea76387e6f397e88 245 SMART SM00382 98 227 1.0E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS19280 8a97ac26fff8481fea76387e6f397e88 245 Pfam PF01695 IstB-like ATP binding protein 69 218 2.2E-18 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 APT61_RS19280 8a97ac26fff8481fea76387e6f397e88 245 PIRSF PIRSF003073 2 245 1.0E-35 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein APT61_RS15120 42f5ce9355a76f5aad7e6d27fc70b27e 231 PANTHER PTHR19139:SF103 1 231 7.4E-78 T 22-04-2016 APT61_RS15120 42f5ce9355a76f5aad7e6d27fc70b27e 231 Pfam PF00230 Major intrinsic protein 2 223 1.9E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS15120 42f5ce9355a76f5aad7e6d27fc70b27e 231 SUPERFAMILY SSF81338 2 228 7.33E-70 T 22-04-2016 IPR023271 Aquaporin-like APT61_RS15120 42f5ce9355a76f5aad7e6d27fc70b27e 231 PANTHER PTHR19139 1 231 7.4E-78 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS15120 42f5ce9355a76f5aad7e6d27fc70b27e 231 ProSitePatterns PS00221 MIP family signature. 61 69 - T 22-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 APT61_RS15120 42f5ce9355a76f5aad7e6d27fc70b27e 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 2 230 36.097 T 22-04-2016 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 APT61_RS15120 42f5ce9355a76f5aad7e6d27fc70b27e 231 PRINTS PR00783 Major intrinsic protein family signature 206 226 3.6E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS15120 42f5ce9355a76f5aad7e6d27fc70b27e 231 PRINTS PR00783 Major intrinsic protein family signature 3 22 3.6E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS15120 42f5ce9355a76f5aad7e6d27fc70b27e 231 PRINTS PR00783 Major intrinsic protein family signature 80 99 3.6E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS15120 42f5ce9355a76f5aad7e6d27fc70b27e 231 PRINTS PR00783 Major intrinsic protein family signature 43 67 3.6E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS15120 42f5ce9355a76f5aad7e6d27fc70b27e 231 PRINTS PR00783 Major intrinsic protein family signature 137 155 3.6E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS15120 42f5ce9355a76f5aad7e6d27fc70b27e 231 PRINTS PR00783 Major intrinsic protein family signature 167 189 3.6E-51 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS15120 42f5ce9355a76f5aad7e6d27fc70b27e 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 223 1.0E-64 T 22-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 APT61_RS15120 42f5ce9355a76f5aad7e6d27fc70b27e 231 Gene3D G3DSA:1.20.1080.10 2 229 3.6E-71 T 22-04-2016 IPR023271 Aquaporin-like APT61_RS03300 e5987efc74bda495aad368bfa2c6d20d 588 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 11 68 9.0E-26 T 22-04-2016 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 APT61_RS03300 e5987efc74bda495aad368bfa2c6d20d 588 Pfam PF03237 Terminase-like family 162 571 1.5E-117 T 22-04-2016 IPR004921 Terminase, large subunit APT61_RS03300 e5987efc74bda495aad368bfa2c6d20d 588 Gene3D G3DSA:1.10.10.10 13 44 8.3E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04390 08d7b4fac3ba94c0225c4c2040302f5a 719 Gene3D G3DSA:3.40.50.980 233 375 1.8E-16 T 22-04-2016 APT61_RS04390 08d7b4fac3ba94c0225c4c2040302f5a 719 Gene3D G3DSA:3.30.300.30 617 713 5.3E-8 T 22-04-2016 APT61_RS04390 08d7b4fac3ba94c0225c4c2040302f5a 719 SMART SM00563 30 140 2.1E-26 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APT61_RS04390 08d7b4fac3ba94c0225c4c2040302f5a 719 Gene3D G3DSA:2.30.38.10 533 609 1.9E-14 T 22-04-2016 APT61_RS04390 08d7b4fac3ba94c0225c4c2040302f5a 719 Pfam PF01553 Acyltransferase 16 137 1.9E-18 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APT61_RS04390 08d7b4fac3ba94c0225c4c2040302f5a 719 Pfam PF00501 AMP-binding enzyme 233 619 4.9E-68 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APT61_RS04390 08d7b4fac3ba94c0225c4c2040302f5a 719 Gene3D G3DSA:3.40.50.980 376 532 5.2E-40 T 22-04-2016 APT61_RS04390 08d7b4fac3ba94c0225c4c2040302f5a 719 PANTHER PTHR24096 124 715 0.0 T 22-04-2016 APT61_RS04390 08d7b4fac3ba94c0225c4c2040302f5a 719 Gene3D G3DSA:3.40.1130.10 6 141 5.1E-4 T 22-04-2016 APT61_RS04390 08d7b4fac3ba94c0225c4c2040302f5a 719 PANTHER PTHR24096:SF177 124 715 0.0 T 22-04-2016 APT61_RS04390 08d7b4fac3ba94c0225c4c2040302f5a 719 SUPERFAMILY SSF69593 5 171 2.35E-20 T 22-04-2016 APT61_RS04390 08d7b4fac3ba94c0225c4c2040302f5a 719 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 22-04-2016 IPR020845 AMP-binding, conserved site APT61_RS04390 08d7b4fac3ba94c0225c4c2040302f5a 719 SUPERFAMILY SSF56801 205 711 1.44E-95 T 22-04-2016 APT61_RS19265 a8a4822ba32649d26fdd6de734fc9b69 213 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 65 4.1E-11 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS19265 a8a4822ba32649d26fdd6de734fc9b69 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 5.0E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS19265 a8a4822ba32649d26fdd6de734fc9b69 213 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 5.0E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS19265 a8a4822ba32649d26fdd6de734fc9b69 213 Gene3D G3DSA:1.10.10.60 18 50 4.9E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19265 a8a4822ba32649d26fdd6de734fc9b69 213 SUPERFAMILY SSF46689 13 93 7.18E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19265 a8a4822ba32649d26fdd6de734fc9b69 213 Gene3D G3DSA:1.10.357.10 73 205 8.4E-24 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS19265 a8a4822ba32649d26fdd6de734fc9b69 213 PANTHER PTHR30328 16 210 2.3E-53 T 22-04-2016 APT61_RS19265 a8a4822ba32649d26fdd6de734fc9b69 213 PANTHER PTHR30328:SF16 16 210 2.3E-53 T 22-04-2016 APT61_RS19265 a8a4822ba32649d26fdd6de734fc9b69 213 Gene3D G3DSA:1.10.10.60 51 72 2.7E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19265 a8a4822ba32649d26fdd6de734fc9b69 213 SUPERFAMILY SSF48498 90 212 7.28E-27 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 SMART SM00316 103 171 5.5E-8 T 22-04-2016 IPR022967 RNA-binding domain, S1 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 SMART SM00316 190 260 2.8E-28 T 22-04-2016 IPR022967 RNA-binding domain, S1 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 SMART SM00316 19 87 1.3E-4 T 22-04-2016 IPR022967 RNA-binding domain, S1 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 SMART SM00316 275 347 2.2E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 SMART SM00316 362 434 3.4E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 SMART SM00316 449 520 1.0E-20 T 22-04-2016 IPR022967 RNA-binding domain, S1 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 SUPERFAMILY SSF50249 88 174 4.85E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 PANTHER PTHR10724:SF6 1 514 4.1E-281 T 22-04-2016 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 Gene3D G3DSA:2.40.50.140 102 172 5.8E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 Gene3D G3DSA:2.40.50.140 448 521 2.4E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 Gene3D G3DSA:2.40.50.140 279 359 2.8E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 Gene3D G3DSA:2.40.50.140 192 278 6.7E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 Gene3D G3DSA:2.40.50.140 21 101 1.1E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 Pfam PF00575 S1 RNA binding domain 275 347 2.7E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 Pfam PF00575 S1 RNA binding domain 103 171 4.0E-9 T 22-04-2016 IPR003029 S1 domain GO:0003676 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 Pfam PF00575 S1 RNA binding domain 361 434 9.3E-22 T 22-04-2016 IPR003029 S1 domain GO:0003676 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 Pfam PF00575 S1 RNA binding domain 20 78 1.6E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 22-04-2016 IPR003029 S1 domain GO:0003676 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 Pfam PF00575 S1 RNA binding domain 449 520 7.2E-17 T 22-04-2016 IPR003029 S1 domain GO:0003676 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 SUPERFAMILY SSF50249 429 535 2.29E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 SUPERFAMILY SSF50249 189 277 3.88E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 PIRSF PIRSF002111 1 534 1.4E-220 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 PANTHER PTHR10724 1 514 4.1E-281 T 22-04-2016 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.1E-240 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 SUPERFAMILY SSF50249 342 440 3.58E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 2.6E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 2.6E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 2.6E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 2.6E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 2.6E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 2.6E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 2.6E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 2.6E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 2.6E-99 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 SUPERFAMILY SSF50249 255 363 7.86E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 SUPERFAMILY SSF50249 1 112 1.55E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14960 fe43213651643fbc56f36f890d3fb682 557 Gene3D G3DSA:2.40.50.140 360 439 5.9E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 3.5E-47 T 22-04-2016 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 SUPERFAMILY SSF50447 262 393 8.62E-29 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 153 1.3E-18 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 Gene3D G3DSA:3.30.70.870 395 464 1.5E-13 T 22-04-2016 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 529 0.0 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 Gene3D G3DSA:2.40.30.10 293 394 5.4E-25 T 22-04-2016 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 1.1E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 PANTHER PTHR23115:SF69 1 184 3.8E-255 T 22-04-2016 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 PANTHER PTHR23115:SF69 251 472 3.8E-255 T 22-04-2016 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 PANTHER PTHR23115 1 184 3.8E-255 T 22-04-2016 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 PANTHER PTHR23115 251 472 3.8E-255 T 22-04-2016 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 SUPERFAMILY SSF54980 393 468 3.31E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 Gene3D G3DSA:3.40.50.300 9 282 2.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.336 T 22-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 3.6E-46 T 22-04-2016 IPR032090 Peptide chain release factor 3, C-terminal APT61_RS19185 76a3092948917a1f002cec00e1c4b022 529 SUPERFAMILY SSF52540 10 277 2.1E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00450 dbb95ae80758c9abbd781ff785a3d0ae 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.1E-33 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS00450 dbb95ae80758c9abbd781ff785a3d0ae 206 SUPERFAMILY SSF54719 95 204 6.15E-45 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS00450 dbb95ae80758c9abbd781ff785a3d0ae 206 PIRSF PIRSF000349 1 206 2.0E-79 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS00450 dbb95ae80758c9abbd781ff785a3d0ae 206 SUPERFAMILY SSF46609 1 90 9.03E-37 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS00450 dbb95ae80758c9abbd781ff785a3d0ae 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 201 3.4E-40 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS00450 dbb95ae80758c9abbd781ff785a3d0ae 206 Gene3D G3DSA:1.10.287.990 20 90 1.5E-32 T 22-04-2016 APT61_RS00450 dbb95ae80758c9abbd781ff785a3d0ae 206 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 3.0E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS00450 dbb95ae80758c9abbd781ff785a3d0ae 206 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 3.0E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS00450 dbb95ae80758c9abbd781ff785a3d0ae 206 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 3.0E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS00450 dbb95ae80758c9abbd781ff785a3d0ae 206 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 3.0E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS00450 dbb95ae80758c9abbd781ff785a3d0ae 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 3.0E-27 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS00450 dbb95ae80758c9abbd781ff785a3d0ae 206 PANTHER PTHR11404 1 204 4.8E-108 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS00450 dbb95ae80758c9abbd781ff785a3d0ae 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS16625 01e8d90b0f3d4f8d918f85c8230f0235 532 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 22-04-2016 IPR020845 AMP-binding, conserved site APT61_RS16625 01e8d90b0f3d4f8d918f85c8230f0235 532 Gene3D G3DSA:3.40.50.980 192 352 6.7E-33 T 22-04-2016 APT61_RS16625 01e8d90b0f3d4f8d918f85c8230f0235 532 Gene3D G3DSA:2.30.38.10 353 426 5.2E-23 T 22-04-2016 APT61_RS16625 01e8d90b0f3d4f8d918f85c8230f0235 532 Gene3D G3DSA:3.40.50.980 35 191 1.3E-24 T 22-04-2016 APT61_RS16625 01e8d90b0f3d4f8d918f85c8230f0235 532 Pfam PF13193 AMP-binding enzyme C-terminal domain 442 516 2.5E-10 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APT61_RS16625 01e8d90b0f3d4f8d918f85c8230f0235 532 Pfam PF00501 AMP-binding enzyme 37 433 9.3E-77 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APT61_RS16625 01e8d90b0f3d4f8d918f85c8230f0235 532 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 4 523 9.4E-263 T 22-04-2016 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 APT61_RS16625 01e8d90b0f3d4f8d918f85c8230f0235 532 PANTHER PTHR24095 7 531 5.6E-267 T 22-04-2016 APT61_RS16625 01e8d90b0f3d4f8d918f85c8230f0235 532 PANTHER PTHR24095:SF123 7 531 5.6E-267 T 22-04-2016 APT61_RS16625 01e8d90b0f3d4f8d918f85c8230f0235 532 Gene3D G3DSA:3.30.300.30 428 529 3.0E-25 T 22-04-2016 APT61_RS16625 01e8d90b0f3d4f8d918f85c8230f0235 532 SUPERFAMILY SSF56801 4 528 7.59E-125 T 22-04-2016 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 PANTHER PTHR10133 6 288 0.0 T 22-04-2016 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 PANTHER PTHR10133 318 929 0.0 T 22-04-2016 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 SUPERFAMILY SSF47807 171 292 2.09E-30 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 SMART SM00475 7 268 5.7E-138 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 847 863 1.2E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 1.2E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 732 745 1.2E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 725 1.2E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 877 890 1.2E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 679 1.2E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 680 695 1.2E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 756 781 1.2E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 PRINTS PR00868 DNA-polymerase family A (pol I) signature 815 826 1.2E-79 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 3.2E-54 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 SMART SM00474 332 519 3.2E-47 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 SUPERFAMILY SSF56672 525 930 5.67E-162 T 22-04-2016 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 Gene3D G3DSA:1.20.1060.10 545 665 1.8E-36 T 22-04-2016 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 SUPERFAMILY SSF88723 7 170 1.07E-56 T 22-04-2016 IPR029060 PIN domain-like APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 ProSitePatterns PS00447 DNA polymerase family A signature. 756 775 - T 22-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 SMART SM00279 173 208 1.2E-13 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 Pfam PF01612 3'-5' exonuclease 332 519 9.4E-44 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 Gene3D G3DSA:3.30.420.10 330 544 8.0E-87 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 SMART SM00482 688 894 9.0E-124 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 Pfam PF00476 DNA polymerase family A 554 927 2.1E-159 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 SUPERFAMILY SSF53098 329 520 1.79E-55 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 Gene3D G3DSA:1.10.150.20 187 253 4.0E-25 T 22-04-2016 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 271 1.7E-30 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 PANTHER PTHR10133:SF27 6 288 0.0 T 22-04-2016 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 PANTHER PTHR10133:SF27 318 929 0.0 T 22-04-2016 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 Gene3D G3DSA:1.10.150.20 714 820 5.1E-36 T 22-04-2016 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 Gene3D G3DSA:3.40.50.1010 8 186 6.6E-72 T 22-04-2016 IPR029060 PIN domain-like APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 TIGRFAM TIGR00593 pola: DNA polymerase I 9 930 1.1E-287 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 Gene3D G3DSA:3.30.70.370 821 930 1.2E-69 T 22-04-2016 APT61_RS00150 4030b0a05e838aa92f56f97b923fd22b 930 Gene3D G3DSA:3.30.70.370 666 713 1.2E-69 T 22-04-2016 APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 SMART SM00448 4 120 3.9E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 PANTHER PTHR26402 4 205 1.5E-152 T 22-04-2016 APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 SUPERFAMILY SSF52172 3 135 2.85E-21 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 Gene3D G3DSA:3.40.50.2300 1 125 5.4E-21 T 22-04-2016 APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.371 T 22-04-2016 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.0E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.0E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.0E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 SUPERFAMILY SSF46894 146 207 2.38E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 SMART SM00421 148 205 4.2E-16 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 Pfam PF00072 Response regulator receiver domain 6 120 1.1E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 Gene3D G3DSA:1.10.10.10 126 207 4.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.4E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS07010 4fffe860fdea4365d92feb3dc15c851e 216 PANTHER PTHR26402:SF510 4 205 1.5E-152 T 22-04-2016 APT61_RS04810 90630cf6c7cf3be45e010075223e1f52 550 Gene3D G3DSA:3.90.76.10 132 272 7.8E-20 T 22-04-2016 APT61_RS04810 90630cf6c7cf3be45e010075223e1f52 550 SUPERFAMILY SSF53850 122 544 7.78E-45 T 22-04-2016 APT61_RS04810 90630cf6c7cf3be45e010075223e1f52 550 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 300 2.7E-13 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS04810 90630cf6c7cf3be45e010075223e1f52 550 PANTHER PTHR30290:SF19 120 546 8.5E-97 T 22-04-2016 APT61_RS04810 90630cf6c7cf3be45e010075223e1f52 550 PANTHER PTHR30290:SF19 22 82 8.5E-97 T 22-04-2016 APT61_RS04810 90630cf6c7cf3be45e010075223e1f52 550 PANTHER PTHR30290 120 546 8.5E-97 T 22-04-2016 APT61_RS04810 90630cf6c7cf3be45e010075223e1f52 550 PANTHER PTHR30290 22 82 8.5E-97 T 22-04-2016 APT61_RS04810 90630cf6c7cf3be45e010075223e1f52 550 Pfam PF12793 Sugar transport-related sRNA regulator N-term 8 116 1.7E-32 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain APT61_RS04555 baf533543cbf4bc34806e6be3a8487f7 454 Pfam PF03641 Possible lysine decarboxylase 190 329 1.2E-33 T 22-04-2016 IPR031100 LOG family APT61_RS04555 baf533543cbf4bc34806e6be3a8487f7 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 5.2E-55 T 22-04-2016 IPR021826 Protein of unknown function DUF3412 APT61_RS04555 baf533543cbf4bc34806e6be3a8487f7 454 PANTHER PTHR31223 359 384 5.7E-196 T 22-04-2016 APT61_RS04555 baf533543cbf4bc34806e6be3a8487f7 454 SUPERFAMILY SSF102405 119 330 1.04E-42 T 22-04-2016 APT61_RS04555 baf533543cbf4bc34806e6be3a8487f7 454 Gene3D G3DSA:3.30.1850.10 2 113 7.2E-54 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 APT61_RS04555 baf533543cbf4bc34806e6be3a8487f7 454 PANTHER PTHR31223:SF12 359 384 5.7E-196 T 22-04-2016 APT61_RS04555 baf533543cbf4bc34806e6be3a8487f7 454 Gene3D G3DSA:3.40.50.450 125 452 2.1E-124 T 22-04-2016 APT61_RS04555 baf533543cbf4bc34806e6be3a8487f7 454 PANTHER PTHR31223 83 342 5.7E-196 T 22-04-2016 APT61_RS04555 baf533543cbf4bc34806e6be3a8487f7 454 PANTHER PTHR31223:SF12 83 342 5.7E-196 T 22-04-2016 APT61_RS04555 baf533543cbf4bc34806e6be3a8487f7 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 3.6E-46 T 22-04-2016 IPR027820 Domain of unknown function DUF4478 APT61_RS09015 173e7be67783785aeb38e61d63f85506 437 PANTHER PTHR21266:SF2 39 246 2.6E-56 T 22-04-2016 APT61_RS09015 173e7be67783785aeb38e61d63f85506 437 Gene3D G3DSA:3.90.380.10 162 435 1.1E-71 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 APT61_RS09015 173e7be67783785aeb38e61d63f85506 437 Gene3D G3DSA:2.102.10.10 56 161 1.1E-24 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APT61_RS09015 173e7be67783785aeb38e61d63f85506 437 PANTHER PTHR21266 39 246 2.6E-56 T 22-04-2016 APT61_RS09015 173e7be67783785aeb38e61d63f85506 437 Pfam PF00355 Rieske [2Fe-2S] domain 56 140 2.0E-20 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APT61_RS09015 173e7be67783785aeb38e61d63f85506 437 SUPERFAMILY SSF55961 173 435 8.63E-52 T 22-04-2016 APT61_RS09015 173e7be67783785aeb38e61d63f85506 437 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 203 433 1.7E-18 T 22-04-2016 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 APT61_RS09015 173e7be67783785aeb38e61d63f85506 437 SUPERFAMILY SSF50022 27 170 1.44E-48 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APT61_RS09015 173e7be67783785aeb38e61d63f85506 437 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 92 112 5.5E-36 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APT61_RS09015 173e7be67783785aeb38e61d63f85506 437 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 41 66 5.5E-36 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APT61_RS09015 173e7be67783785aeb38e61d63f85506 437 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 155 181 5.5E-36 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APT61_RS09015 173e7be67783785aeb38e61d63f85506 437 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 196 218 5.5E-36 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APT61_RS09015 173e7be67783785aeb38e61d63f85506 437 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 113 133 5.5E-36 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APT61_RS09015 173e7be67783785aeb38e61d63f85506 437 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 71 86 5.5E-36 T 22-04-2016 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 APT61_RS19350 b3bd89dbb3c8b8407823af52639fc00f 187 Pfam PF05488 PAAR motif 12 80 9.8E-12 T 22-04-2016 IPR008727 PAAR motif APT61_RS00590 fe89dc99cc4cf3dd96f8f603785d2e76 226 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 14 226 4.8E-61 T 22-04-2016 IPR009331 Oligogalacturonate-specific porin APT61_RS00590 fe89dc99cc4cf3dd96f8f603785d2e76 226 PANTHER PTHR38105:SF1 1 226 1.1E-66 T 22-04-2016 APT61_RS00590 fe89dc99cc4cf3dd96f8f603785d2e76 226 PANTHER PTHR38105 1 226 1.1E-66 T 22-04-2016 APT61_RS00590 fe89dc99cc4cf3dd96f8f603785d2e76 226 Gene3D G3DSA:2.40.230.30 21 226 6.3E-59 T 22-04-2016 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 732 793 4.3E-30 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 Pfam PF00204 DNA gyrase B 221 390 3.0E-59 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 SUPERFAMILY SSF54211 221 392 5.88E-62 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 SUPERFAMILY SSF55874 4 220 7.47E-76 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 115.117 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 SUPERFAMILY SSF56719 730 795 9.68E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 SUPERFAMILY SSF56719 394 560 9.68E-87 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 Gene3D G3DSA:3.30.230.10 220 392 1.2E-78 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 Gene3D G3DSA:3.40.50.670 718 786 1.7E-101 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 Gene3D G3DSA:3.40.50.670 404 550 1.7E-101 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 9.3E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 9.3E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 9.3E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 9.3E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 9.3E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 9.3E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 9.3E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 9.3E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 9.3E-71 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.3E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 1.3E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 1.3E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.3E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.3E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 1.3E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 1.3E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 1.3E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 1.3E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 1.3E-80 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PANTHER PTHR10169 1 553 0.0 T 22-04-2016 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 PANTHER PTHR10169 722 804 0.0 T 22-04-2016 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 Gene3D G3DSA:3.30.565.10 15 218 6.0E-92 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 Pfam PF01751 Toprim domain 419 531 4.0E-18 T 22-04-2016 IPR006171 Toprim domain APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 173 2.6E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 SMART SM00387 31 175 6.3E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS22070 354115e8fb37281a818ee07f813aa710 804 SMART SM00433 35 797 4.2E-280 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS10440 c6f561e56450618b96ba6acdc3d3dffa 172 Pfam PF13412 Winged helix-turn-helix DNA-binding 25 72 1.5E-16 T 22-04-2016 APT61_RS10440 c6f561e56450618b96ba6acdc3d3dffa 172 PANTHER PTHR30154:SF2 17 166 1.3E-42 T 22-04-2016 APT61_RS10440 c6f561e56450618b96ba6acdc3d3dffa 172 SUPERFAMILY SSF46785 25 84 6.34E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10440 c6f561e56450618b96ba6acdc3d3dffa 172 PANTHER PTHR30154 17 166 1.3E-42 T 22-04-2016 APT61_RS10440 c6f561e56450618b96ba6acdc3d3dffa 172 Pfam PF01037 Lrp/AsnC ligand binding domain 102 161 3.4E-15 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT61_RS10440 c6f561e56450618b96ba6acdc3d3dffa 172 SMART SM00344 25 131 1.7E-36 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APT61_RS10440 c6f561e56450618b96ba6acdc3d3dffa 172 ProSitePatterns PS00519 AsnC-type HTH domain signature. 43 69 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT61_RS10440 c6f561e56450618b96ba6acdc3d3dffa 172 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 41 52 2.2E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS10440 c6f561e56450618b96ba6acdc3d3dffa 172 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 25 41 2.2E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS10440 c6f561e56450618b96ba6acdc3d3dffa 172 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 52 71 2.2E-10 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS10440 c6f561e56450618b96ba6acdc3d3dffa 172 Gene3D G3DSA:1.10.10.10 23 76 6.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10440 c6f561e56450618b96ba6acdc3d3dffa 172 Gene3D G3DSA:3.30.70.920 79 157 2.7E-15 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT61_RS10440 c6f561e56450618b96ba6acdc3d3dffa 172 SUPERFAMILY SSF54909 89 167 4.56E-12 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS11435 169d9c40c32d9b388cf7f5f30a008260 331 Gene3D G3DSA:3.40.50.1820 39 327 2.8E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS11435 169d9c40c32d9b388cf7f5f30a008260 331 PRINTS PR00412 Epoxide hydrolase signature 133 146 5.4E-12 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS11435 169d9c40c32d9b388cf7f5f30a008260 331 PRINTS PR00412 Epoxide hydrolase signature 65 83 5.4E-12 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS11435 169d9c40c32d9b388cf7f5f30a008260 331 PRINTS PR00412 Epoxide hydrolase signature 147 160 5.4E-12 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS11435 169d9c40c32d9b388cf7f5f30a008260 331 PRINTS PR00412 Epoxide hydrolase signature 85 100 5.4E-12 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS11435 169d9c40c32d9b388cf7f5f30a008260 331 PRINTS PR00412 Epoxide hydrolase signature 306 328 5.4E-12 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS11435 169d9c40c32d9b388cf7f5f30a008260 331 PANTHER PTHR10992 36 172 3.0E-53 T 22-04-2016 APT61_RS11435 169d9c40c32d9b388cf7f5f30a008260 331 PANTHER PTHR10992 190 331 3.0E-53 T 22-04-2016 APT61_RS11435 169d9c40c32d9b388cf7f5f30a008260 331 Pfam PF00561 alpha/beta hydrolase fold 60 190 5.8E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS11435 169d9c40c32d9b388cf7f5f30a008260 331 SUPERFAMILY SSF53474 38 327 3.86E-55 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS11435 169d9c40c32d9b388cf7f5f30a008260 331 PANTHER PTHR10992:SF764 36 172 3.0E-53 T 22-04-2016 APT61_RS11435 169d9c40c32d9b388cf7f5f30a008260 331 PANTHER PTHR10992:SF764 190 331 3.0E-53 T 22-04-2016 APT61_RS07850 35572104f325f82e0e3943178c76b673 353 SUPERFAMILY SSF53383 13 349 6.45E-79 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS07850 35572104f325f82e0e3943178c76b673 353 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 8 349 3.5E-125 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 APT61_RS07850 35572104f325f82e0e3943178c76b673 353 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 208 217 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APT61_RS07850 35572104f325f82e0e3943178c76b673 353 Pfam PF00155 Aminotransferase class I and II 42 348 6.1E-65 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS07850 35572104f325f82e0e3943178c76b673 353 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 6 352 55.048 T 22-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 APT61_RS07850 35572104f325f82e0e3943178c76b673 353 Gene3D G3DSA:3.90.1150.10 252 349 5.7E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS07850 35572104f325f82e0e3943178c76b673 353 Gene3D G3DSA:3.40.640.10 47 251 2.1E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS07850 35572104f325f82e0e3943178c76b673 353 PANTHER PTHR11751:SF398 1 352 7.8E-100 T 22-04-2016 APT61_RS07850 35572104f325f82e0e3943178c76b673 353 PANTHER PTHR11751 1 352 7.8E-100 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 ProSitePatterns PS01229 Hypothetical cof family signature 2. 716 738 - T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 PANTHER PTHR24093 92 827 0.0 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 Gene3D G3DSA:3.30.70.100 2 65 4.6E-15 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 Pfam PF00403 Heavy-metal-associated domain 103 158 1.5E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 Pfam PF00403 Heavy-metal-associated domain 8 61 1.7E-9 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 SUPERFAMILY SSF81653 321 418 2.22E-24 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 Gene3D G3DSA:3.40.50.1000 644 784 2.6E-54 T 22-04-2016 IPR023214 HAD-like domain APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 Gene3D G3DSA:3.40.50.1000 493 533 2.6E-54 T 22-04-2016 IPR023214 HAD-like domain APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 Gene3D G3DSA:3.40.1110.10 534 643 4.6E-19 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 ProSitePatterns PS01047 Heavy-metal-associated domain. 104 133 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 SUPERFAMILY SSF55008 100 164 4.58E-19 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 522 528 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 251 825 1.7E-181 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 Pfam PF00122 E1-E2 ATPase 289 510 5.8E-63 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 Pfam PF00702 haloacid dehalogenase-like hydrolase 517 730 6.3E-47 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 Gene3D G3DSA:2.70.150.10 265 419 2.2E-28 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 232 825 1.9E-188 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 SUPERFAMILY SSF56784 518 538 7.76E-58 T 22-04-2016 IPR023214 HAD-like domain APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 SUPERFAMILY SSF56784 574 822 7.76E-58 T 22-04-2016 IPR023214 HAD-like domain APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 290 793 3.3E-88 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 652 4.3E-26 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 739 751 4.3E-26 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 368 382 4.3E-26 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 663 673 4.3E-26 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 716 735 4.3E-26 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 534 4.3E-26 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 SUPERFAMILY SSF81665 285 322 4.71E-12 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 SUPERFAMILY SSF81665 765 789 4.71E-12 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 SUPERFAMILY SSF81665 419 514 4.71E-12 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 Gene3D G3DSA:3.30.70.100 100 164 1.1E-23 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 PANTHER PTHR24093:SF319 92 827 0.0 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 SUPERFAMILY SSF55008 3 68 3.27E-11 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 PRINTS PR00943 Copper-transporting ATPase signature 140 160 2.7E-8 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 PRINTS PR00943 Copper-transporting ATPase signature 503 518 2.7E-8 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 PRINTS PR00943 Copper-transporting ATPase signature 236 255 2.7E-8 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 PRINTS PR00943 Copper-transporting ATPase signature 308 326 2.7E-8 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 PRINTS PR00943 Copper-transporting ATPase signature 441 455 2.7E-8 T 22-04-2016 APT61_RS17070 8ebe55a9d0c1c1a71b04b19728c73a37 832 PRINTS PR00943 Copper-transporting ATPase signature 693 710 2.7E-8 T 22-04-2016 APT61_RS17715 7b6a9d6b969381e16283077571fb96bd 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 226 5.4E-21 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APT61_RS17715 7b6a9d6b969381e16283077571fb96bd 321 SUPERFAMILY SSF51735 3 312 1.91E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS17715 7b6a9d6b969381e16283077571fb96bd 321 Gene3D G3DSA:3.40.50.720 2 307 1.2E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS17715 7b6a9d6b969381e16283077571fb96bd 321 PANTHER PTHR10366 3 319 2.0E-40 T 22-04-2016 APT61_RS07480 a8aca4ca8189016c68f16dd372472b9f 249 SUPERFAMILY SSF51735 8 240 7.6E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07480 a8aca4ca8189016c68f16dd372472b9f 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 147 175 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS07480 a8aca4ca8189016c68f16dd372472b9f 249 PANTHER PTHR24322:SF320 160 192 1.1E-44 T 22-04-2016 APT61_RS07480 a8aca4ca8189016c68f16dd372472b9f 249 PANTHER PTHR24322:SF320 19 144 1.1E-44 T 22-04-2016 APT61_RS07480 a8aca4ca8189016c68f16dd372472b9f 249 Pfam PF00106 short chain dehydrogenase 15 201 5.9E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07480 a8aca4ca8189016c68f16dd372472b9f 249 Gene3D G3DSA:3.40.50.720 7 241 3.4E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07480 a8aca4ca8189016c68f16dd372472b9f 249 PANTHER PTHR24322 160 192 1.1E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07480 a8aca4ca8189016c68f16dd372472b9f 249 PANTHER PTHR24322 19 144 1.1E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07480 a8aca4ca8189016c68f16dd372472b9f 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 16 33 1.3E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07480 a8aca4ca8189016c68f16dd372472b9f 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 1.3E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07480 a8aca4ca8189016c68f16dd372472b9f 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.3E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07480 a8aca4ca8189016c68f16dd372472b9f 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.3E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07480 a8aca4ca8189016c68f16dd372472b9f 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.3E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS07480 a8aca4ca8189016c68f16dd372472b9f 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.3E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS06240 6c6d2d8bf829f5d535deb20015134974 564 PANTHER PTHR24421:SF25 2 286 3.2E-230 T 22-04-2016 APT61_RS06240 6c6d2d8bf829f5d535deb20015134974 564 Pfam PF07730 Histidine kinase 361 424 5.7E-18 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APT61_RS06240 6c6d2d8bf829f5d535deb20015134974 564 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 555 5.9E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS06240 6c6d2d8bf829f5d535deb20015134974 564 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 127 1.2E-20 T 22-04-2016 IPR029095 NarX-like, N-terminal APT61_RS06240 6c6d2d8bf829f5d535deb20015134974 564 SMART SM00304 174 227 6.0E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS06240 6c6d2d8bf829f5d535deb20015134974 564 SMART SM00387 465 559 9.1E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS06240 6c6d2d8bf829f5d535deb20015134974 564 Gene3D G3DSA:3.30.565.10 427 556 5.6E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS06240 6c6d2d8bf829f5d535deb20015134974 564 SUPERFAMILY SSF158472 176 225 4.97E-8 T 22-04-2016 APT61_RS06240 6c6d2d8bf829f5d535deb20015134974 564 Pfam PF00672 HAMP domain 156 223 1.3E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS06240 6c6d2d8bf829f5d535deb20015134974 564 PANTHER PTHR24421:SF25 356 558 3.2E-230 T 22-04-2016 APT61_RS06240 6c6d2d8bf829f5d535deb20015134974 564 SUPERFAMILY SSF55874 431 555 5.24E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS06240 6c6d2d8bf829f5d535deb20015134974 564 PANTHER PTHR24421 356 558 3.2E-230 T 22-04-2016 APT61_RS06240 6c6d2d8bf829f5d535deb20015134974 564 PANTHER PTHR24421 2 286 3.2E-230 T 22-04-2016 APT61_RS14725 80e6515d5006856ae6d01af5067c9414 105 PANTHER PTHR31350 1 90 1.5E-28 T 22-04-2016 APT61_RS14725 80e6515d5006856ae6d01af5067c9414 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 5.2E-20 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 APT61_RS14725 80e6515d5006856ae6d01af5067c9414 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 1.5E-34 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 APT61_RS14725 80e6515d5006856ae6d01af5067c9414 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 38.563 T 22-04-2016 IPR022866 Heat shock protein HspQ APT61_RS14725 80e6515d5006856ae6d01af5067c9414 105 SUPERFAMILY SSF141255 4 95 1.29E-28 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 APT61_RS14725 80e6515d5006856ae6d01af5067c9414 105 SMART SM00992 3 102 1.8E-34 T 22-04-2016 IPR011722 Hemimethylated DNA-binding domain GO:0003677 APT61_RS14725 80e6515d5006856ae6d01af5067c9414 105 PANTHER PTHR31350:SF6 1 90 1.5E-28 T 22-04-2016 APT61_RS01810 e93227f2c76bddb9327298fee541ad06 360 PIRSF PIRSF001455 13 356 3.5E-106 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APT61_RS01810 e93227f2c76bddb9327298fee541ad06 360 Pfam PF01761 3-dehydroquinate synthase 67 325 6.4E-110 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APT61_RS01810 e93227f2c76bddb9327298fee541ad06 360 PANTHER PTHR21090 1 360 1.8E-212 T 22-04-2016 APT61_RS01810 e93227f2c76bddb9327298fee541ad06 360 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 352 9.5E-122 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APT61_RS01810 e93227f2c76bddb9327298fee541ad06 360 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 43.086 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 APT61_RS01810 e93227f2c76bddb9327298fee541ad06 360 Gene3D G3DSA:1.20.1090.10 173 355 1.6E-67 T 22-04-2016 APT61_RS01810 e93227f2c76bddb9327298fee541ad06 360 Gene3D G3DSA:3.40.50.1970 2 172 4.5E-67 T 22-04-2016 APT61_RS01810 e93227f2c76bddb9327298fee541ad06 360 SUPERFAMILY SSF56796 4 356 2.49E-116 T 22-04-2016 APT61_RS09070 2fb416888cdb560d630df70abe49a5cf 308 Pfam PF00775 Dioxygenase 105 289 1.7E-63 T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 APT61_RS09070 2fb416888cdb560d630df70abe49a5cf 308 PANTHER PTHR33711:SF4 1 305 6.9E-108 T 22-04-2016 APT61_RS09070 2fb416888cdb560d630df70abe49a5cf 308 SUPERFAMILY SSF49482 6 292 5.89E-93 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 APT61_RS09070 2fb416888cdb560d630df70abe49a5cf 308 Gene3D G3DSA:2.60.130.10 3 305 1.7E-101 T 22-04-2016 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 APT61_RS09070 2fb416888cdb560d630df70abe49a5cf 308 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 9 289 3.5E-133 T 22-04-2016 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1|UniPathway: UPA00157 APT61_RS09070 2fb416888cdb560d630df70abe49a5cf 308 PANTHER PTHR33711 1 305 6.9E-108 T 22-04-2016 APT61_RS09070 2fb416888cdb560d630df70abe49a5cf 308 Pfam PF04444 Catechol dioxygenase N terminus 27 95 5.6E-23 T 22-04-2016 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 APT61_RS09070 2fb416888cdb560d630df70abe49a5cf 308 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 135 163 - T 22-04-2016 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 APT61_RS08670 0b1e726f2268416b7255b743538a71f8 124 SUPERFAMILY SSF81296 26 124 1.82E-27 T 22-04-2016 IPR014756 Immunoglobulin E-set APT61_RS08670 0b1e726f2268416b7255b743538a71f8 124 PANTHER PTHR34820:SF1 4 123 5.0E-16 T 22-04-2016 IPR032694 Copper transport protein YcnJ GO:0006825 APT61_RS08670 0b1e726f2268416b7255b743538a71f8 124 Gene3D G3DSA:2.60.40.1220 26 124 3.4E-31 T 22-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like APT61_RS08670 0b1e726f2268416b7255b743538a71f8 124 PANTHER PTHR34820 4 123 5.0E-16 T 22-04-2016 APT61_RS08670 0b1e726f2268416b7255b743538a71f8 124 Pfam PF04234 CopC domain 27 123 8.0E-25 T 22-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 APT61_RS13420 41f0dbfcb63a8db4ab775d14ecdb6412 417 PANTHER PTHR30629 1 417 2.3E-76 T 22-04-2016 APT61_RS13420 41f0dbfcb63a8db4ab775d14ecdb6412 417 Gene3D G3DSA:1.10.443.10 213 390 2.1E-23 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS13420 41f0dbfcb63a8db4ab775d14ecdb6412 417 Gene3D G3DSA:1.10.150.130 128 200 4.8E-13 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APT61_RS13420 41f0dbfcb63a8db4ab775d14ecdb6412 417 SUPERFAMILY SSF56349 109 391 1.5E-49 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APT61_RS13420 41f0dbfcb63a8db4ab775d14ecdb6412 417 PANTHER PTHR30629:SF4 1 417 2.3E-76 T 22-04-2016 APT61_RS13420 41f0dbfcb63a8db4ab775d14ecdb6412 417 Pfam PF13356 Domain of unknown function (DUF4102) 4 90 6.0E-12 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 APT61_RS13420 41f0dbfcb63a8db4ab775d14ecdb6412 417 Pfam PF00589 Phage integrase family 214 382 1.1E-16 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS14340 6d50ca6f701db700c148567acd8291fb 427 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 8 426 4.6E-179 T 22-04-2016 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 KEGG: 00480+1.11.1.- APT61_RS14340 6d50ca6f701db700c148567acd8291fb 427 PANTHER PTHR30521:SF4 48 427 5.2E-189 T 22-04-2016 APT61_RS14340 6d50ca6f701db700c148567acd8291fb 427 PANTHER PTHR30521 48 427 5.2E-189 T 22-04-2016 APT61_RS14340 6d50ca6f701db700c148567acd8291fb 427 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 39 5.3E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APT61_RS14340 6d50ca6f701db700c148567acd8291fb 427 Pfam PF04261 Dyp-type peroxidase family 65 414 5.7E-117 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- APT61_RS14340 6d50ca6f701db700c148567acd8291fb 427 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 65 414 7.3E-105 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- APT61_RS14340 6d50ca6f701db700c148567acd8291fb 427 SUPERFAMILY SSF54909 58 419 7.33E-99 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS07660 b139a28629cadb285e03ffc5098af416 147 PANTHER PTHR11717:SF20 1 146 4.2E-93 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APT61_RS07660 b139a28629cadb285e03ffc5098af416 147 PANTHER PTHR11717 1 146 4.2E-93 T 22-04-2016 APT61_RS07660 b139a28629cadb285e03ffc5098af416 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 1.4E-29 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APT61_RS07660 b139a28629cadb285e03ffc5098af416 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 1.4E-29 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APT61_RS07660 b139a28629cadb285e03ffc5098af416 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 1.4E-29 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APT61_RS07660 b139a28629cadb285e03ffc5098af416 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 1.4E-29 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APT61_RS07660 b139a28629cadb285e03ffc5098af416 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 1.4E-29 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APT61_RS07660 b139a28629cadb285e03ffc5098af416 147 SMART SM00226 3 141 5.3E-63 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APT61_RS07660 b139a28629cadb285e03ffc5098af416 147 Gene3D G3DSA:3.40.50.270 2 144 2.3E-46 T 22-04-2016 APT61_RS07660 b139a28629cadb285e03ffc5098af416 147 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 139 6.4E-45 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APT61_RS07660 b139a28629cadb285e03ffc5098af416 147 SUPERFAMILY SSF52788 1 142 9.16E-45 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APT61_RS00190 d77a54ddc0a79ebc053384d4bfcf1da9 228 SUPERFAMILY SSF56935 41 228 1.56E-6 T 22-04-2016 APT61_RS00190 d77a54ddc0a79ebc053384d4bfcf1da9 228 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 13 228 1.2E-68 T 22-04-2016 IPR009331 Oligogalacturonate-specific porin APT61_RS00190 d77a54ddc0a79ebc053384d4bfcf1da9 228 PANTHER PTHR38105 1 228 7.0E-128 T 22-04-2016 APT61_RS00190 d77a54ddc0a79ebc053384d4bfcf1da9 228 PANTHER PTHR38105:SF2 1 228 7.0E-128 T 22-04-2016 APT61_RS00190 d77a54ddc0a79ebc053384d4bfcf1da9 228 Gene3D G3DSA:2.40.230.30 22 228 2.4E-59 T 22-04-2016 APT61_RS19400 3700e17c8ac3f1950bf2165c26bf582d 892 SUPERFAMILY SSF53335 32 212 4.65E-20 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS19400 3700e17c8ac3f1950bf2165c26bf582d 892 Gene3D G3DSA:3.40.50.150 54 184 9.3E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS19400 3700e17c8ac3f1950bf2165c26bf582d 892 PANTHER PTHR40048 27 232 2.1E-26 T 22-04-2016 APT61_RS19400 3700e17c8ac3f1950bf2165c26bf582d 892 Pfam PF13578 Methyltransferase domain 65 181 2.9E-24 T 22-04-2016 APT61_RS03955 4d0573feb577f7df621319bfcfce0480 380 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 3.4E-143 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- APT61_RS03955 4d0573feb577f7df621319bfcfce0480 380 Gene3D G3DSA:3.80.30.20 7 239 2.5E-28 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APT61_RS03955 4d0573feb577f7df621319bfcfce0480 380 SUPERFAMILY SSF102114 5 376 1.83E-110 T 22-04-2016 APT61_RS03955 4d0573feb577f7df621319bfcfce0480 380 Pfam PF06969 HemN C-terminal domain 304 364 1.7E-8 T 22-04-2016 IPR010723 HemN, C-terminal APT61_RS03955 4d0573feb577f7df621319bfcfce0480 380 Pfam PF04055 Radical SAM superfamily 11 179 3.4E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS03955 4d0573feb577f7df621319bfcfce0480 380 PANTHER PTHR13932 5 379 2.8E-229 T 22-04-2016 APT61_RS03955 4d0573feb577f7df621319bfcfce0480 380 PANTHER PTHR13932:SF7 5 379 2.8E-229 T 22-04-2016 APT61_RS03955 4d0573feb577f7df621319bfcfce0480 380 SMART SM00729 6 223 1.5E-54 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APT61_RS11890 5f0e81da0807389bfc85e01cc55fa7ef 145 ProDom PD460230 MEMBRANE STORAGE INNER HAEMIN SYSTEM HMSS PGA BIOFILM PGAD TRANSMEMBRANE 1 128 7.0E-16 T 22-04-2016 APT61_RS11890 5f0e81da0807389bfc85e01cc55fa7ef 145 Pfam PF13994 PgaD-like protein 5 130 5.9E-25 T 22-04-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 APT61_RS11890 5f0e81da0807389bfc85e01cc55fa7ef 145 TIGRFAM TIGR03940 PGA_PgaD: poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD 4 131 5.7E-21 T 22-04-2016 IPR023829 Poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD GO:0042710 APT61_RS20950 e05275e300c7bb104955b38a25a2a339 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 APT61_RS20950 e05275e300c7bb104955b38a25a2a339 122 PANTHER PTHR34299:SF1 1 121 7.7E-41 T 22-04-2016 APT61_RS20950 e05275e300c7bb104955b38a25a2a339 122 Gene3D G3DSA:1.10.3830.10 3 121 2.3E-45 T 22-04-2016 APT61_RS20950 e05275e300c7bb104955b38a25a2a339 122 PANTHER PTHR34299 1 121 7.7E-41 T 22-04-2016 APT61_RS20950 e05275e300c7bb104955b38a25a2a339 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 116 5.4E-35 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 APT61_RS01630 2a5d519d8cb427d9be994bea35744b66 658 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 636 5.8E-266 T 22-04-2016 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 UniPathway: UPA00165 APT61_RS01630 2a5d519d8cb427d9be994bea35744b66 658 PANTHER PTHR10357:SF152 1 631 0.0 T 22-04-2016 APT61_RS01630 2a5d519d8cb427d9be994bea35744b66 658 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 658 68.954 T 22-04-2016 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 UniPathway: UPA00165 APT61_RS01630 2a5d519d8cb427d9be994bea35744b66 658 SUPERFAMILY SSF51445 493 566 1.72E-127 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS01630 2a5d519d8cb427d9be994bea35744b66 658 SUPERFAMILY SSF51445 131 464 1.72E-127 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS01630 2a5d519d8cb427d9be994bea35744b66 658 Gene3D G3DSA:3.20.20.80 150 567 5.0E-110 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS01630 2a5d519d8cb427d9be994bea35744b66 658 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 11 97 1.0E-16 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APT61_RS01630 2a5d519d8cb427d9be994bea35744b66 658 PANTHER PTHR10357 1 631 0.0 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS01630 2a5d519d8cb427d9be994bea35744b66 658 SUPERFAMILY SSF81296 7 144 1.38E-39 T 22-04-2016 IPR014756 Immunoglobulin E-set APT61_RS01630 2a5d519d8cb427d9be994bea35744b66 658 Gene3D G3DSA:2.60.40.10 7 149 1.5E-48 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS01630 2a5d519d8cb427d9be994bea35744b66 658 Pfam PF00128 Alpha amylase, catalytic domain 305 354 1.6E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS01630 2a5d519d8cb427d9be994bea35744b66 658 Pfam PF00128 Alpha amylase, catalytic domain 186 270 8.2E-6 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS01630 2a5d519d8cb427d9be994bea35744b66 658 SMART SM00642 167 559 1.3E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS00140 13aac6bf8940d6d2d4732cf7245063da 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APT61_RS00140 13aac6bf8940d6d2d4732cf7245063da 207 PANTHER PTHR35891:SF2 1 207 1.7E-100 T 22-04-2016 APT61_RS00140 13aac6bf8940d6d2d4732cf7245063da 207 SUPERFAMILY SSF52833 20 205 8.89E-47 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS00140 13aac6bf8940d6d2d4732cf7245063da 207 PANTHER PTHR35891 1 207 1.7E-100 T 22-04-2016 APT61_RS00140 13aac6bf8940d6d2d4732cf7245063da 207 PIRSF PIRSF001488 1 207 7.9E-89 T 22-04-2016 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL APT61_RS00140 13aac6bf8940d6d2d4732cf7245063da 207 Pfam PF01323 DSBA-like thioredoxin domain 40 196 1.2E-28 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 APT61_RS00140 13aac6bf8940d6d2d4732cf7245063da 207 Gene3D G3DSA:3.40.30.10 1 118 5.3E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS00140 13aac6bf8940d6d2d4732cf7245063da 207 Gene3D G3DSA:3.40.30.10 120 204 6.7E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 Gene3D G3DSA:3.40.50.720 7 185 4.6E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 1.3E-46 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 1.3E-46 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 1.3E-46 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 1.3E-46 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 1.3E-46 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 Gene3D G3DSA:3.30.360.10 186 487 1.4E-122 T 22-04-2016 APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 PIRSF PIRSF000110 1 491 6.6E-181 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 3.5E-57 T 22-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 SUPERFAMILY SSF55347 176 488 4.58E-113 T 22-04-2016 APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 PANTHER PTHR23429 1 489 2.5E-227 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 22-04-2016 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.589 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 PANTHER PTHR23429:SF0 1 489 2.5E-227 T 22-04-2016 APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 SUPERFAMILY SSF51735 4 189 1.02E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 4.3E-204 T 22-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APT61_RS08620 c0f348cca4d879ffbc7be0dd5fc1e51e 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 1.1E-116 T 22-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 APT61_RS15515 391cb677122959f324b3c143171cf42e 809 SUPERFAMILY SSF50998 168 536 5.23E-139 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APT61_RS15515 391cb677122959f324b3c143171cf42e 809 SUPERFAMILY SSF50998 573 794 5.23E-139 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APT61_RS15515 391cb677122959f324b3c143171cf42e 809 Pfam PF01011 PQQ enzyme repeat 737 774 2.2E-7 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS15515 391cb677122959f324b3c143171cf42e 809 Pfam PF01011 PQQ enzyme repeat 228 257 5.2E-7 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS15515 391cb677122959f324b3c143171cf42e 809 Pfam PF01011 PQQ enzyme repeat 458 482 1.2E-6 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS15515 391cb677122959f324b3c143171cf42e 809 SMART SM00564 731 764 2.8E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS15515 391cb677122959f324b3c143171cf42e 809 SMART SM00564 353 394 17.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS15515 391cb677122959f324b3c143171cf42e 809 SMART SM00564 493 527 110.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS15515 391cb677122959f324b3c143171cf42e 809 SMART SM00564 423 472 22.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS15515 391cb677122959f324b3c143171cf42e 809 SMART SM00564 669 703 580.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS15515 391cb677122959f324b3c143171cf42e 809 SMART SM00564 222 254 0.51 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS15515 391cb677122959f324b3c143171cf42e 809 Gene3D G3DSA:2.140.10.10 584 809 1.3E-140 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APT61_RS15515 391cb677122959f324b3c143171cf42e 809 Gene3D G3DSA:2.140.10.10 139 548 1.3E-140 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APT61_RS15515 391cb677122959f324b3c143171cf42e 809 PANTHER PTHR32303 132 522 2.3E-127 T 22-04-2016 APT61_RS15515 391cb677122959f324b3c143171cf42e 809 PANTHER PTHR32303 592 713 2.3E-127 T 22-04-2016 APT61_RS15515 391cb677122959f324b3c143171cf42e 809 PANTHER PTHR32303 729 809 2.3E-127 T 22-04-2016 APT61_RS15515 391cb677122959f324b3c143171cf42e 809 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 16 809 0.0 T 22-04-2016 IPR017511 PQQ-dependent membrane bound dehydrogenase, glucose/quinate/shikimate-related GO:0016021|GO:0016614|GO:0048038|GO:0055114 APT61_RS15515 391cb677122959f324b3c143171cf42e 809 PANTHER PTHR32303:SF4 132 522 2.3E-127 T 22-04-2016 APT61_RS15515 391cb677122959f324b3c143171cf42e 809 PANTHER PTHR32303:SF4 592 713 2.3E-127 T 22-04-2016 APT61_RS15515 391cb677122959f324b3c143171cf42e 809 PANTHER PTHR32303:SF4 729 809 2.3E-127 T 22-04-2016 APT61_RS15515 391cb677122959f324b3c143171cf42e 809 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 418 439 - T 22-04-2016 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 APT61_RS10185 993d771f80d667432aa4af5291bc7481 267 Gene3D G3DSA:3.40.50.620 39 180 1.2E-50 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS10185 993d771f80d667432aa4af5291bc7481 267 PANTHER PTHR30336 99 266 1.4E-21 T 22-04-2016 APT61_RS10185 993d771f80d667432aa4af5291bc7481 267 PANTHER PTHR30336:SF4 99 266 1.4E-21 T 22-04-2016 APT61_RS10185 993d771f80d667432aa4af5291bc7481 267 Pfam PF02698 DUF218 domain 41 174 6.6E-14 T 22-04-2016 IPR003848 Domain of unknown function DUF218 APT61_RS01540 585b74df0d98668aaf78b752d92fed33 255 Gene3D G3DSA:3.40.50.300 2 251 1.6E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01540 585b74df0d98668aaf78b752d92fed33 255 Pfam PF00005 ABC transporter 21 181 3.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS01540 585b74df0d98668aaf78b752d92fed33 255 SMART SM00382 30 230 7.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS01540 585b74df0d98668aaf78b752d92fed33 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 5.6E-11 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT61_RS01540 585b74df0d98668aaf78b752d92fed33 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS01540 585b74df0d98668aaf78b752d92fed33 255 PANTHER PTHR24220:SF358 128 254 1.4E-125 T 22-04-2016 APT61_RS01540 585b74df0d98668aaf78b752d92fed33 255 PANTHER PTHR24220:SF358 7 112 1.4E-125 T 22-04-2016 APT61_RS01540 585b74df0d98668aaf78b752d92fed33 255 SUPERFAMILY SSF52540 4 253 6.18E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01540 585b74df0d98668aaf78b752d92fed33 255 PANTHER PTHR24220 128 254 1.4E-125 T 22-04-2016 APT61_RS01540 585b74df0d98668aaf78b752d92fed33 255 PANTHER PTHR24220 7 112 1.4E-125 T 22-04-2016 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 SMART SM00842 10 196 1.3E-95 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 PANTHER PTHR32432:SF4 1 413 3.0E-181 T 22-04-2016 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 418 29.439 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 Gene3D G3DSA:3.30.420.40 6 138 5.7E-33 T 22-04-2016 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 6.6E-161 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 PANTHER PTHR32432 1 413 3.0E-181 T 22-04-2016 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 Gene3D G3DSA:3.30.420.40 169 209 3.1E-6 T 22-04-2016 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 SUPERFAMILY SSF53067 8 221 1.07E-60 T 22-04-2016 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 SUPERFAMILY SSF53067 198 384 1.02E-46 T 22-04-2016 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 9.4E-30 T 22-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 Gene3D G3DSA:3.30.420.40 210 234 2.0E-29 T 22-04-2016 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 Gene3D G3DSA:3.30.420.40 298 359 2.0E-29 T 22-04-2016 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 Gene3D G3DSA:3.90.640.10 235 297 4.2E-18 T 22-04-2016 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 PIRSF PIRSF003101 2 418 4.0E-152 T 22-04-2016 IPR020823 Cell division protein FtsA GO:0007049 APT61_RS18590 6e2b8b365e2a6b1bcaed4b5a43e9c5e7 418 Pfam PF14450 Cell division protein FtsA 207 381 1.9E-24 T 22-04-2016 APT61_RS17240 746d680617b10e7dfa511fc8789cfd3d 286 Gene3D G3DSA:3.10.129.10 6 115 1.4E-48 T 22-04-2016 IPR029069 HotDog domain APT61_RS17240 746d680617b10e7dfa511fc8789cfd3d 286 Pfam PF13622 Thioesterase-like superfamily 32 282 1.3E-58 T 22-04-2016 APT61_RS17240 746d680617b10e7dfa511fc8789cfd3d 286 SUPERFAMILY SSF54637 116 285 7.29E-57 T 22-04-2016 IPR029069 HotDog domain APT61_RS17240 746d680617b10e7dfa511fc8789cfd3d 286 Gene3D G3DSA:3.10.129.10 125 284 3.8E-56 T 22-04-2016 IPR029069 HotDog domain APT61_RS17240 746d680617b10e7dfa511fc8789cfd3d 286 SUPERFAMILY SSF54637 6 114 7.65E-42 T 22-04-2016 IPR029069 HotDog domain APT61_RS17240 746d680617b10e7dfa511fc8789cfd3d 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 2.3E-100 T 22-04-2016 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 APT61_RS12785 e6a767c8004c97b27357d2ef3b73cbea 323 Gene3D G3DSA:3.10.450.50 15 150 4.0E-9 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS12785 e6a767c8004c97b27357d2ef3b73cbea 323 Gene3D G3DSA:3.10.450.50 193 321 9.0E-11 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS12785 e6a767c8004c97b27357d2ef3b73cbea 323 SUPERFAMILY SSF54427 12 155 3.23E-22 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS12785 e6a767c8004c97b27357d2ef3b73cbea 323 Pfam PF12680 SnoaL-like domain 194 307 1.9E-10 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain APT61_RS12785 e6a767c8004c97b27357d2ef3b73cbea 323 SUPERFAMILY SSF54427 193 321 5.32E-21 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS12785 e6a767c8004c97b27357d2ef3b73cbea 323 Pfam PF07366 SnoaL-like polyketide cyclase 21 145 9.2E-7 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain APT61_RS19105 6af54fce49ae76211447c7e4228d1279 645 Gene3D G3DSA:1.10.1240.20 406 472 4.9E-28 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 APT61_RS19105 6af54fce49ae76211447c7e4228d1279 645 SUPERFAMILY SSF53955 479 641 2.75E-53 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS19105 6af54fce49ae76211447c7e4228d1279 645 PANTHER PTHR21666 463 645 2.4E-101 T 22-04-2016 APT61_RS19105 6af54fce49ae76211447c7e4228d1279 645 Gene3D G3DSA:1.10.530.10 475 640 2.3E-55 T 22-04-2016 APT61_RS19105 6af54fce49ae76211447c7e4228d1279 645 SUPERFAMILY SSF48435 28 477 1.31E-134 T 22-04-2016 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 APT61_RS19105 6af54fce49ae76211447c7e4228d1279 645 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 501 529 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APT61_RS19105 6af54fce49ae76211447c7e4228d1279 645 Pfam PF14718 Soluble lytic murein transglycosylase L domain 408 472 2.3E-22 T 22-04-2016 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 APT61_RS19105 6af54fce49ae76211447c7e4228d1279 645 PANTHER PTHR21666:SF184 463 645 2.4E-101 T 22-04-2016 APT61_RS19105 6af54fce49ae76211447c7e4228d1279 645 Pfam PF01464 Transglycosylase SLT domain 483 595 1.6E-34 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 APT61_RS19105 6af54fce49ae76211447c7e4228d1279 645 Gene3D G3DSA:1.25.20.10 29 389 2.0E-121 T 22-04-2016 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 APT61_RS14215 07a524c062109b5cd21794894a912469 180 Hamap MF_01205 O-acetyl-ADP-ribose deacetylase [ymdB]. 2 172 48.826 T 22-04-2016 IPR024900 O-acetyl-ADP-ribose deacetylase APT61_RS14215 07a524c062109b5cd21794894a912469 180 Pfam PF01661 Macro domain 21 137 3.4E-42 T 22-04-2016 IPR002589 Macro domain APT61_RS14215 07a524c062109b5cd21794894a912469 180 SMART SM00506 4 137 9.5E-53 T 22-04-2016 IPR002589 Macro domain APT61_RS14215 07a524c062109b5cd21794894a912469 180 PANTHER PTHR11106 1 171 8.2E-82 T 22-04-2016 APT61_RS14215 07a524c062109b5cd21794894a912469 180 SUPERFAMILY SSF52949 2 173 8.07E-64 T 22-04-2016 APT61_RS14215 07a524c062109b5cd21794894a912469 180 Gene3D G3DSA:3.40.220.10 2 176 5.1E-70 T 22-04-2016 APT61_RS15790 f302a90fffa08dfdf071766c8f1e98b6 320 PANTHER PTHR34697:SF2 1 320 2.0E-36 T 22-04-2016 APT61_RS15790 f302a90fffa08dfdf071766c8f1e98b6 320 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 21 295 1.5E-17 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD APT61_RS15790 f302a90fffa08dfdf071766c8f1e98b6 320 PANTHER PTHR34697 1 320 2.0E-36 T 22-04-2016 APT61_RS07045 b5357ec96e92ed1629c6b0cd1b149388 478 SMART SM00924 62 165 2.8E-27 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain APT61_RS07045 b5357ec96e92ed1629c6b0cd1b149388 478 SUPERFAMILY SSF54631 164 304 7.2E-24 T 22-04-2016 APT61_RS07045 b5357ec96e92ed1629c6b0cd1b149388 478 TIGRFAM TIGR00400 mgtE: magnesium transporter 55 477 2.3E-77 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 APT61_RS07045 b5357ec96e92ed1629c6b0cd1b149388 478 Pfam PF03448 MgtE intracellular N domain 63 163 1.3E-22 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain APT61_RS07045 b5357ec96e92ed1629c6b0cd1b149388 478 Gene3D G3DSA:3.10.580.10 156 289 9.8E-17 T 22-04-2016 APT61_RS07045 b5357ec96e92ed1629c6b0cd1b149388 478 PANTHER PTHR41394:SF1 290 477 1.2E-39 T 22-04-2016 APT61_RS07045 b5357ec96e92ed1629c6b0cd1b149388 478 Pfam PF00571 CBS domain 229 282 1.2E-5 T 22-04-2016 IPR000644 CBS domain APT61_RS07045 b5357ec96e92ed1629c6b0cd1b149388 478 SUPERFAMILY SSF161093 306 477 2.09E-48 T 22-04-2016 APT61_RS07045 b5357ec96e92ed1629c6b0cd1b149388 478 Gene3D G3DSA:1.25.60.10 50 155 4.2E-21 T 22-04-2016 APT61_RS07045 b5357ec96e92ed1629c6b0cd1b149388 478 Gene3D G3DSA:1.10.357.20 306 477 3.4E-54 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APT61_RS07045 b5357ec96e92ed1629c6b0cd1b149388 478 Pfam PF01769 Divalent cation transporter 349 471 2.3E-24 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 APT61_RS07045 b5357ec96e92ed1629c6b0cd1b149388 478 SUPERFAMILY SSF158791 51 161 1.7E-22 T 22-04-2016 APT61_RS07045 b5357ec96e92ed1629c6b0cd1b149388 478 PANTHER PTHR41394 290 477 1.2E-39 T 22-04-2016 APT61_RS21850 98451222d8c3017709dd068721aac1d1 362 PANTHER PTHR32182 1 359 2.7E-37 T 22-04-2016 APT61_RS21850 98451222d8c3017709dd068721aac1d1 362 PANTHER PTHR32182:SF13 1 359 2.7E-37 T 22-04-2016 APT61_RS21850 98451222d8c3017709dd068721aac1d1 362 SUPERFAMILY SSF52540 1 188 5.04E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21850 98451222d8c3017709dd068721aac1d1 362 SUPERFAMILY SSF52540 245 342 5.04E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21850 98451222d8c3017709dd068721aac1d1 362 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 23 334 2.1E-28 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS21850 98451222d8c3017709dd068721aac1d1 362 Gene3D G3DSA:3.40.50.300 1 183 5.7E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21850 98451222d8c3017709dd068721aac1d1 362 Gene3D G3DSA:3.40.50.300 232 339 5.7E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21850 98451222d8c3017709dd068721aac1d1 362 PIRSF PIRSF029347 1 362 9.9E-140 T 22-04-2016 IPR014555 RecF-like APT61_RS19745 5ea9021865df0b740957c8eee53a6def 474 PANTHER PTHR11699 1 474 0.0 T 22-04-2016 APT61_RS19745 5ea9021865df0b740957c8eee53a6def 474 Pfam PF00171 Aldehyde dehydrogenase family 14 470 4.3E-162 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS19745 5ea9021865df0b740957c8eee53a6def 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APT61_RS19745 5ea9021865df0b740957c8eee53a6def 474 TIGRFAM TIGR03374 ABALDH: 1-pyrroline dehydrogenase 2 473 1.3E-300 T 22-04-2016 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 APT61_RS19745 5ea9021865df0b740957c8eee53a6def 474 PANTHER PTHR11699:SF109 1 474 0.0 T 22-04-2016 IPR015657 Aminobutyraldehyde dehydrogenase KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 APT61_RS19745 5ea9021865df0b740957c8eee53a6def 474 Gene3D G3DSA:3.40.605.10 2 258 1.4E-94 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS19745 5ea9021865df0b740957c8eee53a6def 474 SUPERFAMILY SSF53720 2 473 9.42E-155 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS19745 5ea9021865df0b740957c8eee53a6def 474 Gene3D G3DSA:3.40.309.10 259 437 2.2E-59 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS19745 5ea9021865df0b740957c8eee53a6def 474 Hamap MF_01275 Gamma-aminobutyraldehyde dehydrogenase [prr]. 1 474 79.326 T 22-04-2016 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 APT61_RS17415 d5188c0955281dbd3f112f3422aedc26 323 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 252 1.6E-8 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS17415 d5188c0955281dbd3f112f3422aedc26 323 PANTHER PTHR30270 1 322 7.0E-146 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APT61_RS17415 d5188c0955281dbd3f112f3422aedc26 323 SUPERFAMILY SSF56042 143 307 5.53E-40 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS17415 d5188c0955281dbd3f112f3422aedc26 323 PANTHER PTHR30270:SF0 1 322 7.0E-146 T 22-04-2016 APT61_RS17415 d5188c0955281dbd3f112f3422aedc26 323 Gene3D G3DSA:3.90.650.10 146 322 3.7E-55 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS17415 d5188c0955281dbd3f112f3422aedc26 323 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 137 6.8E-21 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APT61_RS17415 d5188c0955281dbd3f112f3422aedc26 323 SUPERFAMILY SSF55326 4 138 3.29E-34 T 22-04-2016 APT61_RS17415 d5188c0955281dbd3f112f3422aedc26 323 PIRSF PIRSF005303 1 322 1.1E-86 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APT61_RS17415 d5188c0955281dbd3f112f3422aedc26 323 Gene3D G3DSA:3.30.1330.10 3 140 4.8E-45 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APT61_RS17415 d5188c0955281dbd3f112f3422aedc26 323 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 31.505 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APT61_RS17415 d5188c0955281dbd3f112f3422aedc26 323 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 1.1E-115 T 22-04-2016 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897|UniPathway: UPA00060 APT61_RS13995 65baa33294b52d6069a0316ab84f9796 317 PANTHER PTHR18919:SF109 26 317 3.0E-130 T 22-04-2016 APT61_RS13995 65baa33294b52d6069a0316ab84f9796 317 Gene3D G3DSA:3.40.47.10 1 160 3.5E-66 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS13995 65baa33294b52d6069a0316ab84f9796 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 70.234 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APT61_RS13995 65baa33294b52d6069a0316ab84f9796 317 SUPERFAMILY SSF53901 3 317 3.11E-70 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS13995 65baa33294b52d6069a0316ab84f9796 317 Gene3D G3DSA:3.40.47.10 161 316 3.6E-52 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS13995 65baa33294b52d6069a0316ab84f9796 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 6.4E-36 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APT61_RS13995 65baa33294b52d6069a0316ab84f9796 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 2.7E-30 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APT61_RS13995 65baa33294b52d6069a0316ab84f9796 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 1.4E-148 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 APT61_RS13995 65baa33294b52d6069a0316ab84f9796 317 PANTHER PTHR18919 26 317 3.0E-130 T 22-04-2016 APT61_RS21415 3158201725b70cd8c904c70fa3d01ad3 513 Gene3D G3DSA:3.40.50.300 3 233 6.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21415 3158201725b70cd8c904c70fa3d01ad3 513 SUPERFAMILY SSF52540 3 227 1.05E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21415 3158201725b70cd8c904c70fa3d01ad3 513 SMART SM00382 29 219 1.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS21415 3158201725b70cd8c904c70fa3d01ad3 513 SMART SM00382 286 482 2.1E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS21415 3158201725b70cd8c904c70fa3d01ad3 513 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 9.2E-280 T 22-04-2016 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 APT61_RS21415 3158201725b70cd8c904c70fa3d01ad3 513 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS21415 3158201725b70cd8c904c70fa3d01ad3 513 PANTHER PTHR24220 6 387 2.9E-213 T 22-04-2016 APT61_RS21415 3158201725b70cd8c904c70fa3d01ad3 513 Pfam PF00005 ABC transporter 20 171 1.6E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS21415 3158201725b70cd8c904c70fa3d01ad3 513 Pfam PF00005 ABC transporter 278 433 1.2E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS21415 3158201725b70cd8c904c70fa3d01ad3 513 PANTHER PTHR24220:SF392 6 387 2.9E-213 T 22-04-2016 APT61_RS21415 3158201725b70cd8c904c70fa3d01ad3 513 SUPERFAMILY SSF52540 258 494 6.95E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21415 3158201725b70cd8c904c70fa3d01ad3 513 Gene3D G3DSA:3.40.50.300 253 505 7.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02185 4363326f335edc2987d8e609b33aa633 127 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.7E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02185 4363326f335edc2987d8e609b33aa633 127 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02185 4363326f335edc2987d8e609b33aa633 127 PANTHER PTHR14413 1 118 6.7E-68 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02185 4363326f335edc2987d8e609b33aa633 127 Pfam PF01196 Ribosomal protein L17 20 116 1.2E-34 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02185 4363326f335edc2987d8e609b33aa633 127 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02185 4363326f335edc2987d8e609b33aa633 127 Gene3D G3DSA:3.90.1030.10 1 117 2.4E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02185 4363326f335edc2987d8e609b33aa633 127 SUPERFAMILY SSF64263 1 118 3.4E-51 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS05545 cbc723b0a60e0eba709593b59672c11e 95 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 25.583 T 22-04-2016 IPR005346 RnfH protein APT61_RS05545 cbc723b0a60e0eba709593b59672c11e 95 Gene3D G3DSA:3.10.20.280 3 89 4.4E-37 T 22-04-2016 IPR005346 RnfH protein APT61_RS05545 cbc723b0a60e0eba709593b59672c11e 95 SUPERFAMILY SSF54285 5 79 9.16E-26 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APT61_RS05545 cbc723b0a60e0eba709593b59672c11e 95 Pfam PF03658 RnfH family Ubiquitin 5 87 4.8E-34 T 22-04-2016 IPR005346 RnfH protein APT61_RS05545 cbc723b0a60e0eba709593b59672c11e 95 PANTHER PTHR37483 2 94 2.4E-42 T 22-04-2016 APT61_RS05545 cbc723b0a60e0eba709593b59672c11e 95 PANTHER PTHR37483:SF1 2 94 2.4E-42 T 22-04-2016 APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 PANTHER PTHR13847:SF182 603 666 7.1E-156 T 22-04-2016 APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 SUPERFAMILY SSF53335 148 214 8.91E-5 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 PANTHER PTHR13847 226 585 7.1E-156 T 22-04-2016 APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 PANTHER PTHR13847 603 666 7.1E-156 T 22-04-2016 APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 Pfam PF01266 FAD dependent oxidoreductase 267 632 2.5E-47 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 7 657 28.243 T 22-04-2016 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 Gene3D G3DSA:3.50.50.60 396 477 1.1E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 Gene3D G3DSA:3.50.50.60 571 649 1.1E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 Gene3D G3DSA:3.50.50.60 266 344 1.1E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 PANTHER PTHR13847:SF182 226 585 7.1E-156 T 22-04-2016 APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 Gene3D G3DSA:3.40.50.150 11 249 3.6E-104 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 SUPERFAMILY SSF54373 476 559 7.46E-6 T 22-04-2016 APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 119 244 5.0E-48 T 22-04-2016 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 SUPERFAMILY SSF51905 571 658 1.62E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 SUPERFAMILY SSF51905 268 478 1.62E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS06655 3698531e5741d7e557706a695a6d3961 667 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 267 662 4.5E-151 T 22-04-2016 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 APT61_RS17600 ada93b374f190334e8a247ad6d771893 366 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS17600 ada93b374f190334e8a247ad6d771893 366 PANTHER PTHR23132:SF8 1 365 5.6E-181 T 22-04-2016 APT61_RS17600 ada93b374f190334e8a247ad6d771893 366 SUPERFAMILY SSF56059 140 354 1.63E-62 T 22-04-2016 APT61_RS17600 ada93b374f190334e8a247ad6d771893 366 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 6.2E-81 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS17600 ada93b374f190334e8a247ad6d771893 366 Gene3D G3DSA:3.30.1490.20 157 223 3.1E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APT61_RS17600 ada93b374f190334e8a247ad6d771893 366 Gene3D G3DSA:3.30.470.20 224 362 1.7E-54 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS17600 ada93b374f190334e8a247ad6d771893 366 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.856 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS17600 ada93b374f190334e8a247ad6d771893 366 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 1.8E-31 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS17600 ada93b374f190334e8a247ad6d771893 366 PIRSF PIRSF039102 1 359 2.7E-134 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS17600 ada93b374f190334e8a247ad6d771893 366 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 6.3E-117 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS17600 ada93b374f190334e8a247ad6d771893 366 Gene3D G3DSA:3.40.50.20 1 129 8.8E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS17600 ada93b374f190334e8a247ad6d771893 366 PANTHER PTHR23132 1 365 5.6E-181 T 22-04-2016 APT61_RS17600 ada93b374f190334e8a247ad6d771893 366 SUPERFAMILY SSF52440 3 139 1.82E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS17600 ada93b374f190334e8a247ad6d771893 366 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS18660 ac4e926352534d928e699946ad1b49a9 334 Gene3D G3DSA:1.10.260.40 1 62 1.1E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS18660 ac4e926352534d928e699946ad1b49a9 334 SUPERFAMILY SSF47413 2 58 9.57E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS18660 ac4e926352534d928e699946ad1b49a9 334 Gene3D G3DSA:3.40.50.2300 156 329 2.0E-36 T 22-04-2016 APT61_RS18660 ac4e926352534d928e699946ad1b49a9 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 6.6E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS18660 ac4e926352534d928e699946ad1b49a9 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS18660 ac4e926352534d928e699946ad1b49a9 334 SUPERFAMILY SSF53822 60 314 1.37E-41 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS18660 ac4e926352534d928e699946ad1b49a9 334 PANTHER PTHR30146 1 333 2.0E-227 T 22-04-2016 APT61_RS18660 ac4e926352534d928e699946ad1b49a9 334 Gene3D G3DSA:3.40.50.2300 63 152 1.0E-28 T 22-04-2016 APT61_RS18660 ac4e926352534d928e699946ad1b49a9 334 SMART SM00354 1 73 7.4E-32 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS18660 ac4e926352534d928e699946ad1b49a9 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 2.1E-154 T 22-04-2016 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 APT61_RS18660 ac4e926352534d928e699946ad1b49a9 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 312 1.4E-14 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APT61_RS18660 ac4e926352534d928e699946ad1b49a9 334 PANTHER PTHR30146:SF25 1 333 2.0E-227 T 22-04-2016 APT61_RS14020 ce0c044a08f9a5e509e084cd258852ee 315 Pfam PF01479 S4 domain 20 66 1.6E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS14020 ce0c044a08f9a5e509e084cd258852ee 315 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS14020 ce0c044a08f9a5e509e084cd258852ee 315 PANTHER PTHR11079:SF84 1 314 6.8E-164 T 22-04-2016 APT61_RS14020 ce0c044a08f9a5e509e084cd258852ee 315 SMART SM00363 20 79 9.9E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS14020 ce0c044a08f9a5e509e084cd258852ee 315 Pfam PF00849 RNA pseudouridylate synthase 101 250 7.4E-30 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS14020 ce0c044a08f9a5e509e084cd258852ee 315 PANTHER PTHR11079 1 314 6.8E-164 T 22-04-2016 APT61_RS14020 ce0c044a08f9a5e509e084cd258852ee 315 SUPERFAMILY SSF55174 19 70 4.42E-9 T 22-04-2016 APT61_RS14020 ce0c044a08f9a5e509e084cd258852ee 315 SUPERFAMILY SSF55120 95 313 4.0E-67 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS14020 ce0c044a08f9a5e509e084cd258852ee 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 2.1E-99 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS14020 ce0c044a08f9a5e509e084cd258852ee 315 Gene3D G3DSA:3.10.290.10 20 68 1.5E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS04185 a10c6564a1d77ae5508de39c504a0b74 137 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 129 3.0E-53 T 22-04-2016 IPR009883 Toxin CptA APT61_RS04185 a10c6564a1d77ae5508de39c504a0b74 137 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 132 4.0E-45 T 22-04-2016 IPR009883 Toxin CptA APT61_RS04185 a10c6564a1d77ae5508de39c504a0b74 137 PIRSF PIRSF020653 1 137 2.4E-67 T 22-04-2016 IPR009883 Toxin CptA APT61_RS00800 e3670d26c6b207dff6fa5131fe7cc3f2 515 SUPERFAMILY SSF53686 15 366 8.77E-102 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS00800 e3670d26c6b207dff6fa5131fe7cc3f2 515 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 54 67 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APT61_RS00800 e3670d26c6b207dff6fa5131fe7cc3f2 515 Gene3D G3DSA:3.40.50.1100 117 343 5.0E-74 T 22-04-2016 APT61_RS00800 e3670d26c6b207dff6fa5131fe7cc3f2 515 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 317 4.8E-77 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS00800 e3670d26c6b207dff6fa5131fe7cc3f2 515 Gene3D G3DSA:3.40.50.1100 46 116 4.9E-5 T 22-04-2016 APT61_RS00800 e3670d26c6b207dff6fa5131fe7cc3f2 515 SUPERFAMILY SSF55021 337 424 1.28E-27 T 22-04-2016 APT61_RS00800 e3670d26c6b207dff6fa5131fe7cc3f2 515 PANTHER PTHR10314:SF30 1 369 4.2E-200 T 22-04-2016 APT61_RS00800 e3670d26c6b207dff6fa5131fe7cc3f2 515 Gene3D G3DSA:3.40.1020.10 344 513 1.8E-56 T 22-04-2016 APT61_RS00800 e3670d26c6b207dff6fa5131fe7cc3f2 515 SUPERFAMILY SSF55021 421 513 9.84E-26 T 22-04-2016 APT61_RS00800 e3670d26c6b207dff6fa5131fe7cc3f2 515 PANTHER PTHR10314 1 369 4.2E-200 T 22-04-2016 APT61_RS00800 e3670d26c6b207dff6fa5131fe7cc3f2 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 5.0E-28 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 APT61_RS00800 e3670d26c6b207dff6fa5131fe7cc3f2 515 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 426 513 3.9E-28 T 22-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 APT61_RS00800 e3670d26c6b207dff6fa5131fe7cc3f2 515 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 16 513 6.1E-266 T 22-04-2016 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 APT61_RS03435 aac91c6f3f60ce605da2860750077276 168 Gene3D G3DSA:3.40.470.10 2 163 4.3E-58 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APT61_RS03435 aac91c6f3f60ce605da2860750077276 168 SMART SM00987 3 160 0.0045 T 22-04-2016 APT61_RS03435 aac91c6f3f60ce605da2860750077276 168 PANTHER PTHR12159 1 163 1.7E-64 T 22-04-2016 IPR015637 G/U mismatch-specific DNA glycosylase GO:0006281|GO:0019104 APT61_RS03435 aac91c6f3f60ce605da2860750077276 168 Pfam PF03167 Uracil DNA glycosylase superfamily 6 159 3.7E-25 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APT61_RS03435 aac91c6f3f60ce605da2860750077276 168 SUPERFAMILY SSF52141 2 163 1.26E-43 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APT61_RS03435 aac91c6f3f60ce605da2860750077276 168 Hamap MF_01956 G/U mismatch-specific DNA glycosylase [mug]. 1 168 47.568 T 22-04-2016 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial GO:0006281|GO:0019104 APT61_RS03435 aac91c6f3f60ce605da2860750077276 168 SMART SM00986 3 160 0.0045 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 609 1.8E-260 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 Gene3D G3DSA:3.90.226.10 31 177 1.3E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 Gene3D G3DSA:3.90.226.10 220 316 1.3E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 Gene3D G3DSA:3.90.226.10 324 432 8.9E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 Gene3D G3DSA:3.90.226.10 469 550 8.9E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 PANTHER PTHR33209 1 614 3.3E-247 T 22-04-2016 APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 328 541 1.3E-52 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 PIRSF PIRSF001217 8 618 3.5E-226 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 PANTHER PTHR33209:SF1 1 614 3.3E-247 T 22-04-2016 APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 Pfam PF01343 Peptidase family S49 141 297 9.4E-44 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 Pfam PF01343 Peptidase family S49 392 543 5.1E-51 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 SUPERFAMILY SSF52096 54 181 6.71E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 SUPERFAMILY SSF52096 212 287 6.71E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 SUPERFAMILY SSF52096 468 530 1.9E-42 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS13255 e17023214e1b7a3ce6d58aa677dca8f4 618 SUPERFAMILY SSF52096 322 440 1.9E-42 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS14690 3832f5df09ffd6e17a97b788283b68f0 334 Pfam PF13377 Periplasmic binding protein-like domain 176 330 1.7E-22 T 22-04-2016 APT61_RS14690 3832f5df09ffd6e17a97b788283b68f0 334 SUPERFAMILY SSF53822 67 331 2.69E-61 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS14690 3832f5df09ffd6e17a97b788283b68f0 334 Gene3D G3DSA:3.40.50.2300 180 308 1.1E-36 T 22-04-2016 APT61_RS14690 3832f5df09ffd6e17a97b788283b68f0 334 Gene3D G3DSA:1.10.260.40 8 60 3.9E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS14690 3832f5df09ffd6e17a97b788283b68f0 334 SUPERFAMILY SSF47413 5 63 2.81E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS14690 3832f5df09ffd6e17a97b788283b68f0 334 PANTHER PTHR30146:SF30 6 330 1.1E-86 T 22-04-2016 APT61_RS14690 3832f5df09ffd6e17a97b788283b68f0 334 Gene3D G3DSA:3.40.50.2300 61 179 6.1E-40 T 22-04-2016 APT61_RS14690 3832f5df09ffd6e17a97b788283b68f0 334 SMART SM00354 6 77 3.7E-23 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS14690 3832f5df09ffd6e17a97b788283b68f0 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 54 1.1E-14 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS14690 3832f5df09ffd6e17a97b788283b68f0 334 PANTHER PTHR30146 6 330 1.1E-86 T 22-04-2016 APT61_RS07815 92c53e3575d3f91036fc5a6934798c99 334 PANTHER PTHR10366 2 334 1.7E-178 T 22-04-2016 APT61_RS07815 92c53e3575d3f91036fc5a6934798c99 334 SUPERFAMILY SSF51735 1 332 2.99E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07815 92c53e3575d3f91036fc5a6934798c99 334 Gene3D G3DSA:3.90.25.10 196 230 4.8E-22 T 22-04-2016 APT61_RS07815 92c53e3575d3f91036fc5a6934798c99 334 Gene3D G3DSA:3.90.25.10 295 330 4.8E-22 T 22-04-2016 APT61_RS07815 92c53e3575d3f91036fc5a6934798c99 334 Gene3D G3DSA:3.40.50.720 1 195 2.7E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07815 92c53e3575d3f91036fc5a6934798c99 334 PANTHER PTHR10366:SF77 2 334 1.7E-178 T 22-04-2016 APT61_RS07815 92c53e3575d3f91036fc5a6934798c99 334 PRINTS PR01713 Nucleotide sugar epimerase signature 255 270 5.9E-30 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APT61_RS07815 92c53e3575d3f91036fc5a6934798c99 334 PRINTS PR01713 Nucleotide sugar epimerase signature 29 45 5.9E-30 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APT61_RS07815 92c53e3575d3f91036fc5a6934798c99 334 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 5.9E-30 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APT61_RS07815 92c53e3575d3f91036fc5a6934798c99 334 PRINTS PR01713 Nucleotide sugar epimerase signature 294 311 5.9E-30 T 22-04-2016 IPR008089 Nucleotide sugar epimerase GO:0005975|GO:0016857 APT61_RS07815 92c53e3575d3f91036fc5a6934798c99 334 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 8.6E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS03685 aac3dcdac82445324b71eb348048d621 752 SUPERFAMILY SSF56719 28 479 2.09E-154 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APT61_RS03685 aac3dcdac82445324b71eb348048d621 752 PANTHER PTHR10169 6 520 0.0 T 22-04-2016 APT61_RS03685 aac3dcdac82445324b71eb348048d621 752 PANTHER PTHR10169:SF30 6 520 0.0 T 22-04-2016 APT61_RS03685 aac3dcdac82445324b71eb348048d621 752 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 1 738 34.132 T 22-04-2016 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03685 aac3dcdac82445324b71eb348048d621 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 636 1.7E-4 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APT61_RS03685 aac3dcdac82445324b71eb348048d621 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 641 688 2.9E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APT61_RS03685 aac3dcdac82445324b71eb348048d621 752 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 465 4.8E-135 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS03685 aac3dcdac82445324b71eb348048d621 752 Gene3D G3DSA:3.30.1360.40 235 328 6.6E-25 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain APT61_RS03685 aac3dcdac82445324b71eb348048d621 752 Gene3D G3DSA:2.120.10.90 493 726 2.1E-26 T 22-04-2016 APT61_RS03685 aac3dcdac82445324b71eb348048d621 752 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 5 738 0.0 T 22-04-2016 APT61_RS03685 aac3dcdac82445324b71eb348048d621 752 SUPERFAMILY SSF101904 496 736 3.4E-49 T 22-04-2016 APT61_RS03685 aac3dcdac82445324b71eb348048d621 752 Gene3D G3DSA:3.90.199.10 27 234 1.4E-106 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APT61_RS03685 aac3dcdac82445324b71eb348048d621 752 Gene3D G3DSA:3.90.199.10 330 394 1.4E-106 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APT61_RS03685 aac3dcdac82445324b71eb348048d621 752 SMART SM00434 8 458 8.6E-241 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS06225 92dce668ded09a53b9a04891db7987a6 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 8.3E-43 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APT61_RS06225 92dce668ded09a53b9a04891db7987a6 375 SUPERFAMILY SSF55031 179 287 3.89E-30 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS06225 92dce668ded09a53b9a04891db7987a6 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 1.2E-174 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 APT61_RS06225 92dce668ded09a53b9a04891db7987a6 375 Gene3D G3DSA:3.30.70.360 188 288 4.0E-34 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS06225 92dce668ded09a53b9a04891db7987a6 375 Pfam PF07687 Peptidase dimerisation domain 175 281 5.5E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS06225 92dce668ded09a53b9a04891db7987a6 375 SUPERFAMILY SSF53187 292 373 1.33E-63 T 22-04-2016 APT61_RS06225 92dce668ded09a53b9a04891db7987a6 375 SUPERFAMILY SSF53187 5 178 1.33E-63 T 22-04-2016 APT61_RS06225 92dce668ded09a53b9a04891db7987a6 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.348 T 22-04-2016 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18|UniPathway: UPA00034 APT61_RS06225 92dce668ded09a53b9a04891db7987a6 375 PANTHER PTHR11014:SF106 4 374 6.5E-97 T 22-04-2016 APT61_RS06225 92dce668ded09a53b9a04891db7987a6 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 136 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APT61_RS06225 92dce668ded09a53b9a04891db7987a6 375 PANTHER PTHR11014 4 374 6.5E-97 T 22-04-2016 APT61_RS06225 92dce668ded09a53b9a04891db7987a6 375 Gene3D G3DSA:3.40.630.10 316 373 7.2E-74 T 22-04-2016 APT61_RS06225 92dce668ded09a53b9a04891db7987a6 375 Gene3D G3DSA:3.40.630.10 5 187 7.2E-74 T 22-04-2016 APT61_RS06225 92dce668ded09a53b9a04891db7987a6 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APT61_RS21105 bc5e84e7e9afc81e9f9ece76f8646d97 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 2.4E-120 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APT61_RS21105 bc5e84e7e9afc81e9f9ece76f8646d97 529 SUPERFAMILY SSF52335 7 197 1.7E-72 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APT61_RS21105 bc5e84e7e9afc81e9f9ece76f8646d97 529 Gene3D G3DSA:3.40.140.20 253 372 7.6E-51 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APT61_RS21105 bc5e84e7e9afc81e9f9ece76f8646d97 529 Gene3D G3DSA:3.40.140.20 377 519 2.3E-60 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APT61_RS21105 bc5e84e7e9afc81e9f9ece76f8646d97 529 SUPERFAMILY SSF53927 221 529 1.81E-131 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APT61_RS21105 bc5e84e7e9afc81e9f9ece76f8646d97 529 SMART SM00798 137 461 2.8E-217 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APT61_RS21105 bc5e84e7e9afc81e9f9ece76f8646d97 529 Gene3D G3DSA:3.40.50.1380 5 190 2.0E-86 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APT61_RS21105 bc5e84e7e9afc81e9f9ece76f8646d97 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 1.5E-268 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APT61_RS21105 bc5e84e7e9afc81e9f9ece76f8646d97 529 Pfam PF02142 MGS-like domain 19 132 1.4E-29 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APT61_RS21105 bc5e84e7e9afc81e9f9ece76f8646d97 529 PANTHER PTHR11692 5 529 0.0 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APT61_RS21105 bc5e84e7e9afc81e9f9ece76f8646d97 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.494 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APT61_RS21105 bc5e84e7e9afc81e9f9ece76f8646d97 529 PIRSF PIRSF000414 1 529 8.2E-229 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 APT61_RS21105 bc5e84e7e9afc81e9f9ece76f8646d97 529 SMART SM00851 19 132 2.6E-63 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APT61_RS06660 1d2511250a6f4afd26c7c2d351bc6320 405 PANTHER PTHR11712 1 402 7.5E-165 T 22-04-2016 APT61_RS06660 1d2511250a6f4afd26c7c2d351bc6320 405 SUPERFAMILY SSF53901 1 252 8.02E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS06660 1d2511250a6f4afd26c7c2d351bc6320 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 360 3.0E-29 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal APT61_RS06660 1d2511250a6f4afd26c7c2d351bc6320 405 Gene3D G3DSA:3.40.47.10 6 258 3.4E-56 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS06660 1d2511250a6f4afd26c7c2d351bc6320 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 245 6.8E-40 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal APT61_RS06660 1d2511250a6f4afd26c7c2d351bc6320 405 Gene3D G3DSA:3.40.47.10 262 403 1.4E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS06660 1d2511250a6f4afd26c7c2d351bc6320 405 SUPERFAMILY SSF53901 214 402 1.28E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS06660 1d2511250a6f4afd26c7c2d351bc6320 405 SMART SM00825 Beta-ketoacyl synthase 4 405 5.0E-13 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APT61_RS06660 1d2511250a6f4afd26c7c2d351bc6320 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site APT61_RS01035 98cd024be803f7a785d0e5e933ce0297 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 5.2E-62 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01035 98cd024be803f7a785d0e5e933ce0297 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 259 2.7E-67 T 22-04-2016 IPR000150 Cof protein GO:0016787 APT61_RS01035 98cd024be803f7a785d0e5e933ce0297 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 22-04-2016 APT61_RS01035 98cd024be803f7a785d0e5e933ce0297 266 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 APT61_RS01035 98cd024be803f7a785d0e5e933ce0297 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 5.4E-28 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APT61_RS01035 98cd024be803f7a785d0e5e933ce0297 266 Gene3D G3DSA:3.30.1240.10 82 176 1.0E-16 T 22-04-2016 APT61_RS01035 98cd024be803f7a785d0e5e933ce0297 266 PANTHER PTHR10000:SF20 1 266 3.8E-142 T 22-04-2016 APT61_RS01035 98cd024be803f7a785d0e5e933ce0297 266 PANTHER PTHR10000 1 266 3.8E-142 T 22-04-2016 APT61_RS01035 98cd024be803f7a785d0e5e933ce0297 266 SUPERFAMILY SSF56784 1 265 4.07E-69 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01035 98cd024be803f7a785d0e5e933ce0297 266 Gene3D G3DSA:3.40.50.1000 1 72 6.9E-57 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01035 98cd024be803f7a785d0e5e933ce0297 266 Gene3D G3DSA:3.40.50.1000 177 265 6.9E-57 T 22-04-2016 IPR023214 HAD-like domain APT61_RS13205 f7ede2dce7eab464ddb94b4d252a7194 210 SUPERFAMILY SSF52540 1 197 3.16E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13205 f7ede2dce7eab464ddb94b4d252a7194 210 Pfam PF00005 ABC transporter 17 161 1.9E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS13205 f7ede2dce7eab464ddb94b4d252a7194 210 PANTHER PTHR24220 3 206 2.2E-98 T 22-04-2016 APT61_RS13205 f7ede2dce7eab464ddb94b4d252a7194 210 Gene3D G3DSA:3.40.50.300 1 197 1.2E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13205 f7ede2dce7eab464ddb94b4d252a7194 210 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS13205 f7ede2dce7eab464ddb94b4d252a7194 210 SMART SM00382 26 202 8.4E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS13205 f7ede2dce7eab464ddb94b4d252a7194 210 PANTHER PTHR24220:SF485 3 206 2.2E-98 T 22-04-2016 APT61_RS18870 510030e696b22fe2ca848c700f169fef 782 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 761 21.057 T 22-04-2016 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 APT61_RS18870 510030e696b22fe2ca848c700f169fef 782 Gene3D G3DSA:2.60.450.10 48 209 2.3E-24 T 22-04-2016 APT61_RS18870 510030e696b22fe2ca848c700f169fef 782 Pfam PF04453 Organic solvent tolerance protein 309 695 1.8E-108 T 22-04-2016 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 APT61_RS18870 510030e696b22fe2ca848c700f169fef 782 Pfam PF03968 OstA-like protein 53 194 3.4E-28 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal APT61_RS18870 510030e696b22fe2ca848c700f169fef 782 PANTHER PTHR30189 4 780 6.8E-121 T 22-04-2016 APT61_RS13100 461de614e58e4534559ce947548f0642 752 SMART SM01060 80 468 2.1E-274 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 PANTHER PTHR11465 59 633 0.0 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 PIRSF PIRSF038927 46 750 0.0 T 22-04-2016 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 SUPERFAMILY SSF56634 49 583 2.88E-225 T 22-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 ProSitePatterns PS00438 Catalase proximal active site signature. 116 132 - T 22-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 410 418 - T 22-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 Pfam PF00199 Catalase 80 465 4.4E-177 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 Gene3D G3DSA:2.40.180.10 61 435 8.7E-180 T 22-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 PRINTS PR00067 Catalase signature 397 423 7.6E-67 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 PRINTS PR00067 Catalase signature 93 116 7.6E-67 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 PRINTS PR00067 Catalase signature 365 392 7.6E-67 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 PRINTS PR00067 Catalase signature 177 194 7.6E-67 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 PRINTS PR00067 Catalase signature 196 214 7.6E-67 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 PRINTS PR00067 Catalase signature 156 174 7.6E-67 T 22-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 Pfam PF06628 Catalase-related immune-responsive 498 561 3.0E-18 T 22-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 APT61_RS13100 461de614e58e4534559ce947548f0642 752 Gene3D G3DSA:3.40.50.880 599 752 5.0E-43 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS13100 461de614e58e4534559ce947548f0642 752 PANTHER PTHR11465:SF7 59 633 0.0 T 22-04-2016 APT61_RS13100 461de614e58e4534559ce947548f0642 752 SUPERFAMILY SSF52317 597 748 1.74E-12 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 2.5E-28 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 2.5E-28 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 2.5E-28 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 2.5E-28 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 Gene3D G3DSA:1.10.275.10 4 142 5.1E-57 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 Pfam PF10415 Fumarase C C-terminus 411 464 1.4E-16 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 PANTHER PTHR11444:SF25 1 477 5.6E-297 T 22-04-2016 APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 SUPERFAMILY SSF48557 1 458 8.98E-144 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 1.7E-263 T 22-04-2016 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 Gene3D G3DSA:1.10.40.30 411 461 1.7E-18 T 22-04-2016 APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 Pfam PF00206 Lyase 13 345 1.5E-112 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 2.2E-5 T 22-04-2016 APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 2.2E-5 T 22-04-2016 APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 2.2E-5 T 22-04-2016 APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 Gene3D G3DSA:1.20.200.10 143 405 3.7E-86 T 22-04-2016 APT61_RS20505 2475bb3ac56f59a94f2fa07c1aee8d30 478 PANTHER PTHR11444 1 477 5.6E-297 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 SMART SM00388 236 302 5.0E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 Gene3D G3DSA:1.20.5.1040 2 84 2.8E-20 T 22-04-2016 APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 Gene3D G3DSA:1.20.5.1040 101 185 2.5E-28 T 22-04-2016 APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 Gene3D G3DSA:1.10.287.130 229 298 4.9E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 SMART SM00387 348 439 4.5E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 PANTHER PTHR24423:SF474 59 143 9.3E-128 T 22-04-2016 APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 PANTHER PTHR24423:SF474 174 449 9.3E-128 T 22-04-2016 APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 5.9E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 5.9E-5 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 PANTHER PTHR24423 59 143 9.3E-128 T 22-04-2016 APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 PANTHER PTHR24423 174 449 9.3E-128 T 22-04-2016 APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 352 443 1.8E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 9.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 Pfam PF08521 Two-component sensor kinase N-terminal 23 158 2.9E-6 T 22-04-2016 IPR013727 Two-component sensor kinase, N-terminal APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 Gene3D G3DSA:3.30.565.10 309 448 1.3E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 SUPERFAMILY SSF55874 291 448 1.07E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS03670 117565a098ea71cf92891e5c0ae05b9f 449 SUPERFAMILY SSF47384 219 301 2.35E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS05920 b2d4bb5b4b7bf4c542883491801c913e 163 PANTHER PTHR33221 2 152 2.9E-72 T 22-04-2016 APT61_RS05920 b2d4bb5b4b7bf4c542883491801c913e 163 Pfam PF02082 Transcriptional regulator 1 83 4.2E-27 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type APT61_RS05920 b2d4bb5b4b7bf4c542883491801c913e 163 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site APT61_RS05920 b2d4bb5b4b7bf4c542883491801c913e 163 PANTHER PTHR33221:SF1 2 152 2.9E-72 T 22-04-2016 APT61_RS05920 b2d4bb5b4b7bf4c542883491801c913e 163 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.8E-46 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type APT61_RS05920 b2d4bb5b4b7bf4c542883491801c913e 163 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 163 46.408 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 APT61_RS05920 b2d4bb5b4b7bf4c542883491801c913e 163 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 5.6E-66 T 22-04-2016 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 APT61_RS05920 b2d4bb5b4b7bf4c542883491801c913e 163 Gene3D G3DSA:1.10.10.10 1 134 1.5E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05920 b2d4bb5b4b7bf4c542883491801c913e 163 SUPERFAMILY SSF46785 2 133 1.01E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 Gene3D G3DSA:1.10.274.10 197 300 1.3E-32 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 729 1.9E-124 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 SUPERFAMILY SSF47831 198 309 1.15E-25 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 SUPERFAMILY SSF51621 420 715 4.19E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 PANTHER PTHR22931 1 716 0.0 T 22-04-2016 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 SMART SM00065 17 164 2.7E-28 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 Gene3D G3DSA:3.30.450.40 1 160 2.7E-46 T 22-04-2016 IPR029016 GAF domain-like APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 Pfam PF01590 GAF domain 18 152 4.7E-15 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 SUPERFAMILY SSF55781 2 159 2.14E-29 T 22-04-2016 IPR029016 GAF domain-like APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 Gene3D G3DSA:3.20.20.60 423 736 2.7E-100 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 420 707 7.2E-109 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 SUPERFAMILY SSF52009 293 412 3.14E-24 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 Gene3D G3DSA:3.50.30.10 301 416 6.1E-29 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 1.8E-23 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 PANTHER PTHR22931:SF23 1 716 0.0 T 22-04-2016 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 6.9E-24 T 22-04-2016 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 6.9E-24 T 22-04-2016 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 6.9E-24 T 22-04-2016 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 6.9E-24 T 22-04-2016 APT61_RS04420 9579b8e6af74fbc2414db7782f33b616 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 321 391 1.8E-15 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 SUPERFAMILY SSF58104 232 513 6.8E-76 T 22-04-2016 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 SMART SM00283 265 512 1.4E-96 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 9.4E-76 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 9.4E-76 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 9.4E-76 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 9.4E-76 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 9.4E-76 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 9.4E-76 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 Pfam PF02203 Tar ligand binding domain homologue 1 171 8.7E-43 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 PANTHER PTHR32089:SF48 1 515 1.4E-188 T 22-04-2016 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 PANTHER PTHR32089 1 515 1.4E-188 T 22-04-2016 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 SMART SM00319 44 178 1.3E-32 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 Pfam PF00672 HAMP domain 194 261 7.4E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 Gene3D G3DSA:1.20.120.30 38 176 5.0E-33 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 511 4.6E-64 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 290 312 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 SUPERFAMILY SSF47170 25 177 1.96E-34 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 SMART SM00304 212 264 1.2E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS08460 7b6a15b995a1946a2743aab652cc9f94 533 Gene3D G3DSA:1.10.287.950 279 484 5.0E-63 T 22-04-2016 APT61_RS04720 7c904f5b7bdf48e1f8a29b0e083ec638 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 227 5.8E-75 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS04720 7c904f5b7bdf48e1f8a29b0e083ec638 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 229 1.6E-88 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS04720 7c904f5b7bdf48e1f8a29b0e083ec638 236 PANTHER PTHR32125 1 234 2.1E-79 T 22-04-2016 APT61_RS04720 7c904f5b7bdf48e1f8a29b0e083ec638 236 PANTHER PTHR32125:SF4 1 234 2.1E-79 T 22-04-2016 APT61_RS04720 7c904f5b7bdf48e1f8a29b0e083ec638 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 230 30.22 T 22-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS04720 7c904f5b7bdf48e1f8a29b0e083ec638 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 22-04-2016 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS04720 7c904f5b7bdf48e1f8a29b0e083ec638 236 Gene3D G3DSA:3.90.550.10 7 232 1.2E-74 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS04720 7c904f5b7bdf48e1f8a29b0e083ec638 236 SUPERFAMILY SSF53448 8 227 1.3E-58 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS18500 11f5e37029892a896451f9c2b4c206a1 456 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APT61_RS18500 11f5e37029892a896451f9c2b4c206a1 456 Pfam PF00324 Amino acid permease 18 453 1.5E-128 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APT61_RS18500 11f5e37029892a896451f9c2b4c206a1 456 PANTHER PTHR11785 1 449 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS18500 11f5e37029892a896451f9c2b4c206a1 456 PANTHER PTHR11785:SF26 1 449 0.0 T 22-04-2016 APT61_RS18500 11f5e37029892a896451f9c2b4c206a1 456 PIRSF PIRSF006060 1 454 7.3E-78 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS08070 7a6ac863b9d4fe8f3bf26facd0bbc011 334 SUPERFAMILY SSF103039 49 231 1.12E-18 T 22-04-2016 IPR028976 CheC-like domain APT61_RS08070 7a6ac863b9d4fe8f3bf26facd0bbc011 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 321 1.1E-116 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APT61_RS08070 7a6ac863b9d4fe8f3bf26facd0bbc011 334 Gene3D G3DSA:2.30.330.10 242 323 5.9E-6 T 22-04-2016 APT61_RS08070 7a6ac863b9d4fe8f3bf26facd0bbc011 334 PANTHER PTHR30034 2 333 4.3E-152 T 22-04-2016 APT61_RS08070 7a6ac863b9d4fe8f3bf26facd0bbc011 334 SUPERFAMILY SSF101801 250 323 2.49E-12 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) APT61_RS08070 7a6ac863b9d4fe8f3bf26facd0bbc011 334 PIRSF PIRSF002888 2 331 8.8E-101 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APT61_RS08070 7a6ac863b9d4fe8f3bf26facd0bbc011 334 Pfam PF02154 Flagellar motor switch protein FliM 38 231 9.9E-80 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APT61_RS08070 7a6ac863b9d4fe8f3bf26facd0bbc011 334 PANTHER PTHR30034:SF0 2 333 4.3E-152 T 22-04-2016 APT61_RS08070 7a6ac863b9d4fe8f3bf26facd0bbc011 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 7.4E-32 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APT61_RS08070 7a6ac863b9d4fe8f3bf26facd0bbc011 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 7.4E-32 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APT61_RS08070 7a6ac863b9d4fe8f3bf26facd0bbc011 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 7.4E-32 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APT61_RS08070 7a6ac863b9d4fe8f3bf26facd0bbc011 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 7.4E-32 T 22-04-2016 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 APT61_RS08070 7a6ac863b9d4fe8f3bf26facd0bbc011 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 321 9.8E-16 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) APT61_RS12020 f39f5338407171fb68347c8d54a7572f 231 Pfam PF13500 AAA domain 4 207 1.1E-29 T 22-04-2016 APT61_RS12020 f39f5338407171fb68347c8d54a7572f 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 214 23.689 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APT61_RS12020 f39f5338407171fb68347c8d54a7572f 231 PIRSF PIRSF006755 1 223 4.9E-61 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APT61_RS12020 f39f5338407171fb68347c8d54a7572f 231 Gene3D G3DSA:3.40.50.300 3 217 3.4E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12020 f39f5338407171fb68347c8d54a7572f 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 6.2E-39 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APT61_RS12020 f39f5338407171fb68347c8d54a7572f 231 PANTHER PTHR21343 1 230 2.8E-159 T 22-04-2016 APT61_RS12020 f39f5338407171fb68347c8d54a7572f 231 SUPERFAMILY SSF52540 1 210 5.69E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12020 f39f5338407171fb68347c8d54a7572f 231 PANTHER PTHR21343:SF12 1 230 2.8E-159 T 22-04-2016 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 Gene3D G3DSA:2.40.50.140 620 694 1.3E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 SUPERFAMILY SSF55666 145 235 2.52E-30 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 SUPERFAMILY SSF46915 226 325 2.09E-25 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 SUPERFAMILY SSF55666 450 547 2.1E-27 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 SMART SM00316 620 690 1.7E-27 T 22-04-2016 IPR022967 RNA-binding domain, S1 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 SUPERFAMILY SSF54211 4 144 5.06E-50 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 PANTHER PTHR11252 2 691 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 SUPERFAMILY SSF50249 608 693 8.91E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 SUPERFAMILY SSF54791 554 622 2.28E-17 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 Gene3D G3DSA:3.30.230.70 314 542 9.4E-88 T 22-04-2016 IPR027408 PNPase/RNase PH domain APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 Gene3D G3DSA:3.30.230.70 4 225 4.0E-83 T 22-04-2016 IPR027408 PNPase/RNase PH domain APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 2.3E-18 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 1.8E-21 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 Pfam PF00013 KH domain 556 613 1.1E-8 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 Gene3D G3DSA:1.10.10.400 226 313 2.6E-25 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.561 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 PIRSF PIRSF005499 2 710 6.4E-300 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 SMART SM00322 552 617 1.8E-11 T 22-04-2016 IPR004087 K Homology domain GO:0003676 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 Gene3D G3DSA:3.30.1370.10 552 619 1.2E-25 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 SUPERFAMILY SSF54211 301 492 3.44E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 9.7E-26 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 Pfam PF00575 S1 RNA binding domain 619 690 4.7E-23 T 22-04-2016 IPR003029 S1 domain GO:0003676 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 Pfam PF03725 3' exoribonuclease family, domain 2 148 210 9.7E-14 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APT61_RS02835 7f24a6506d938c80e62a43231b96e897 710 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 6.8E-5 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 APT61_RS15300 b270e3d17bd7988bbad930cdef0b8b1c 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site APT61_RS15300 b270e3d17bd7988bbad930cdef0b8b1c 375 PANTHER PTHR11061:SF36 8 375 1.2E-247 T 22-04-2016 APT61_RS15300 b270e3d17bd7988bbad930cdef0b8b1c 375 Gene3D G3DSA:3.40.50.150 182 372 1.5E-50 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS15300 b270e3d17bd7988bbad930cdef0b8b1c 375 PANTHER PTHR11061 8 375 1.2E-247 T 22-04-2016 APT61_RS15300 b270e3d17bd7988bbad930cdef0b8b1c 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 208 374 3.1E-17 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APT61_RS15300 b270e3d17bd7988bbad930cdef0b8b1c 375 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 2 367 7.0E-57 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 APT61_RS15300 b270e3d17bd7988bbad930cdef0b8b1c 375 SUPERFAMILY SSF53335 3 374 3.77E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS15300 b270e3d17bd7988bbad930cdef0b8b1c 375 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site APT61_RS15300 b270e3d17bd7988bbad930cdef0b8b1c 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 80.478 T 22-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 APT61_RS15300 b270e3d17bd7988bbad930cdef0b8b1c 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 374 3.5E-210 T 22-04-2016 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 APT61_RS00840 2a82ba7751599fbf650b9d92398998cb 109 PANTHER PTHR10438 3 109 6.5E-41 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APT61_RS00840 2a82ba7751599fbf650b9d92398998cb 109 PIRSF PIRSF000077 2 108 5.0E-45 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APT61_RS00840 2a82ba7751599fbf650b9d92398998cb 109 Pfam PF00085 Thioredoxin 5 106 1.4E-34 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 APT61_RS00840 2a82ba7751599fbf650b9d92398998cb 109 SUPERFAMILY SSF52833 2 108 7.21E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS00840 2a82ba7751599fbf650b9d92398998cb 109 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.8E-39 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APT61_RS00840 2a82ba7751599fbf650b9d92398998cb 109 Gene3D G3DSA:3.40.30.10 2 108 3.0E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS00840 2a82ba7751599fbf650b9d92398998cb 109 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APT61_RS00840 2a82ba7751599fbf650b9d92398998cb 109 PRINTS PR00421 Thioredoxin family signature 24 32 3.8E-10 T 22-04-2016 APT61_RS00840 2a82ba7751599fbf650b9d92398998cb 109 PRINTS PR00421 Thioredoxin family signature 32 41 3.8E-10 T 22-04-2016 APT61_RS00840 2a82ba7751599fbf650b9d92398998cb 109 PRINTS PR00421 Thioredoxin family signature 72 83 3.8E-10 T 22-04-2016 APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 SUPERFAMILY SSF47384 121 186 1.92E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 1.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 1.7E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 SUPERFAMILY SSF55874 198 346 1.22E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 4.1E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 186 1.1E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 Gene3D G3DSA:3.30.450.20 11 100 1.9E-19 T 22-04-2016 APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 SMART SM00091 7 75 2.6E-7 T 22-04-2016 IPR000014 PAS domain APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 Gene3D G3DSA:3.30.565.10 198 348 1.1E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 SMART SM00387 233 349 1.9E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 SUPERFAMILY SSF55785 11 102 2.09E-5 T 22-04-2016 IPR000014 PAS domain APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 Gene3D G3DSA:1.10.287.130 129 186 6.0E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 PANTHER PTHR24423 11 349 3.8E-181 T 22-04-2016 APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 SMART SM00388 129 194 4.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 PANTHER PTHR24423:SF488 11 349 3.8E-181 T 22-04-2016 APT61_RS00175 3a5b0f9efd10362af649c0380fd07b2c 349 Pfam PF00989 PAS fold 11 97 1.2E-5 T 22-04-2016 IPR013767 PAS fold GO:0006355 APT61_RS11675 c20b65f828c2f5e76f9dd3e3558d7324 302 SUPERFAMILY SSF46785 4 87 2.12E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11675 c20b65f828c2f5e76f9dd3e3558d7324 302 Pfam PF03466 LysR substrate binding domain 88 289 2.1E-40 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS11675 c20b65f828c2f5e76f9dd3e3558d7324 302 PANTHER PTHR30537 1 302 5.2E-112 T 22-04-2016 APT61_RS11675 c20b65f828c2f5e76f9dd3e3558d7324 302 Gene3D G3DSA:1.10.10.10 4 86 2.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11675 c20b65f828c2f5e76f9dd3e3558d7324 302 Gene3D G3DSA:3.40.190.10 100 175 7.6E-21 T 22-04-2016 APT61_RS11675 c20b65f828c2f5e76f9dd3e3558d7324 302 PANTHER PTHR30537:SF5 1 302 5.2E-112 T 22-04-2016 APT61_RS11675 c20b65f828c2f5e76f9dd3e3558d7324 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.4E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS11675 c20b65f828c2f5e76f9dd3e3558d7324 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS11675 c20b65f828c2f5e76f9dd3e3558d7324 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS11675 c20b65f828c2f5e76f9dd3e3558d7324 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS11675 c20b65f828c2f5e76f9dd3e3558d7324 302 SUPERFAMILY SSF53850 86 292 2.9E-44 T 22-04-2016 APT61_RS11675 c20b65f828c2f5e76f9dd3e3558d7324 302 Gene3D G3DSA:3.40.190.10 176 261 2.3E-13 T 22-04-2016 APT61_RS10405 5c9d0e2039b44aad6949ca41bf340591 342 SUPERFAMILY SSF51735 141 300 9.18E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10405 5c9d0e2039b44aad6949ca41bf340591 342 SUPERFAMILY SSF50129 3 173 2.28E-43 T 22-04-2016 IPR011032 GroES-like APT61_RS10405 5c9d0e2039b44aad6949ca41bf340591 342 PANTHER PTHR11695 16 342 1.2E-107 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS10405 5c9d0e2039b44aad6949ca41bf340591 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APT61_RS10405 5c9d0e2039b44aad6949ca41bf340591 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 135 3.1E-26 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APT61_RS10405 5c9d0e2039b44aad6949ca41bf340591 342 Gene3D G3DSA:3.90.180.10 2 170 3.1E-54 T 22-04-2016 IPR011032 GroES-like APT61_RS10405 5c9d0e2039b44aad6949ca41bf340591 342 Pfam PF00107 Zinc-binding dehydrogenase 178 300 3.2E-18 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APT61_RS10405 5c9d0e2039b44aad6949ca41bf340591 342 PANTHER PTHR11695:SF498 16 342 1.2E-107 T 22-04-2016 APT61_RS10405 5c9d0e2039b44aad6949ca41bf340591 342 SMART SM00829 14 336 2.6E-4 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APT61_RS10405 5c9d0e2039b44aad6949ca41bf340591 342 Gene3D G3DSA:3.40.50.720 171 295 7.5E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 PANTHER PTHR32063:SF27 1 1025 0.0 T 22-04-2016 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1022 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 SUPERFAMILY SSF82714 715 801 1.02E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 PANTHER PTHR32063 1 1025 0.0 T 22-04-2016 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 Gene3D G3DSA:1.20.1640.10 293 504 7.2E-55 T 22-04-2016 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 Gene3D G3DSA:3.30.70.1430 38 138 2.9E-31 T 22-04-2016 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 SUPERFAMILY SSF82693 38 130 2.04E-25 T 22-04-2016 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 Gene3D G3DSA:3.30.2090.10 182 276 7.3E-27 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 SUPERFAMILY SSF82714 183 272 5.89E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 Gene3D G3DSA:3.30.2090.10 715 799 3.1E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 Gene3D G3DSA:3.30.70.1430 564 664 2.1E-28 T 22-04-2016 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 SUPERFAMILY SSF82866 298 498 1.7E-45 T 22-04-2016 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 SUPERFAMILY SSF82866 799 1025 7.06E-42 T 22-04-2016 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 Pfam PF00873 AcrB/AcrD/AcrF family 1 1020 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 Gene3D G3DSA:1.10.3850.10 807 1021 3.3E-52 T 22-04-2016 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 2.4E-84 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 2.4E-84 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.4E-84 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.4E-84 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 PRINTS PR00702 Acriflavin resistance protein family signature 549 566 2.4E-84 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.4E-84 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.4E-84 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 PRINTS PR00702 Acriflavin resistance protein family signature 618 632 2.4E-84 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 2.4E-84 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 SUPERFAMILY SSF82693 136 182 2.09E-22 T 22-04-2016 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 SUPERFAMILY SSF82693 275 331 2.09E-22 T 22-04-2016 APT61_RS16810 820cd56449efe196516e0bb1c5cb286b 1031 SUPERFAMILY SSF82693 562 664 8.37E-27 T 22-04-2016 APT61_RS01830 d6205ea78a2605248844ca6f489c6fe4 253 SUPERFAMILY SSF56784 3 240 1.17E-57 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01830 d6205ea78a2605248844ca6f489c6fe4 253 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 125 205 9.2E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS01830 d6205ea78a2605248844ca6f489c6fe4 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 171 9.6E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS01830 d6205ea78a2605248844ca6f489c6fe4 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 124 137 9.6E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS01830 d6205ea78a2605248844ca6f489c6fe4 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 193 9.6E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS01830 d6205ea78a2605248844ca6f489c6fe4 253 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 9.6E-12 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS01830 d6205ea78a2605248844ca6f489c6fe4 253 PANTHER PTHR18901:SF14 1 249 6.2E-89 T 22-04-2016 APT61_RS01830 d6205ea78a2605248844ca6f489c6fe4 253 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 210 4.4E-34 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01830 d6205ea78a2605248844ca6f489c6fe4 253 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 240 2.7E-89 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 APT61_RS01830 d6205ea78a2605248844ca6f489c6fe4 253 Gene3D G3DSA:1.10.150.240 22 101 6.3E-25 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APT61_RS01830 d6205ea78a2605248844ca6f489c6fe4 253 PANTHER PTHR18901 1 249 6.2E-89 T 22-04-2016 APT61_RS01830 d6205ea78a2605248844ca6f489c6fe4 253 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 95 210 2.5E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS01830 d6205ea78a2605248844ca6f489c6fe4 253 Gene3D G3DSA:3.40.50.1000 102 240 4.6E-45 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01830 d6205ea78a2605248844ca6f489c6fe4 253 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 241 36.332 T 22-04-2016 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181|UniPathway: UPA00865 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 SUPERFAMILY SSF81923 12 125 1.57E-20 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 SMART SM01086 779 872 4.2E-12 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 Pfam PF07724 AAA domain (Cdc48 subfamily) 608 773 7.0E-37 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 11 859 0.0 T 22-04-2016 IPR017729 Type VI secretion system, ATPase ClpV1 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 SUPERFAMILY SSF52540 557 849 3.81E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 22 73 0.0023 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 Gene3D G3DSA:1.10.8.60 790 853 1.6E-10 T 22-04-2016 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 Gene3D G3DSA:3.40.50.300 192 375 1.1E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 327 339 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 Gene3D G3DSA:3.40.50.300 562 789 2.0E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 SMART SM00382 231 376 1.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 SMART SM00382 608 779 1.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 SUPERFAMILY SSF52540 192 518 1.65E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 PANTHER PTHR11638:SF11 1 145 0.0 T 22-04-2016 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 PANTHER PTHR11638:SF11 171 875 0.0 T 22-04-2016 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 Gene3D G3DSA:1.10.1780.10 11 123 1.8E-18 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 779 853 4.1E-13 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 686 704 3.1E-30 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 719 733 3.1E-30 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 657 675 3.1E-30 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 612 630 3.1E-30 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 PANTHER PTHR11638 1 145 0.0 T 22-04-2016 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 PANTHER PTHR11638 171 875 0.0 T 22-04-2016 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 Gene3D G3DSA:1.10.8.60 378 460 3.8E-31 T 22-04-2016 APT61_RS09830 6dc5692d1aff9c01aea9a5075b71c799 879 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 236 348 1.9E-9 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 PANTHER PTHR30313 3 580 1.9E-180 T 22-04-2016 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 Pfam PF01807 CHC2 zinc finger 7 100 3.3E-41 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 SUPERFAMILY SSF56731 115 428 1.57E-114 T 22-04-2016 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 1.4E-43 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 SUPERFAMILY SSF117023 447 575 2.35E-39 T 22-04-2016 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 SMART SM00766 450 575 5.0E-45 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 Gene3D G3DSA:3.90.580.10 1 101 5.3E-41 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 Gene3D G3DSA:3.40.1360.10 241 367 2.1E-47 T 22-04-2016 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 Hamap MF_00974 DNA primase [dnaG]. 4 579 30.154 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 Pfam PF08278 DNA primase DnaG DnaB-binding 451 572 1.7E-32 T 22-04-2016 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 Gene3D G3DSA:3.90.980.10 116 240 8.1E-48 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 SUPERFAMILY SSF57783 4 100 6.63E-36 T 22-04-2016 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 SMART SM00400 36 90 1.2E-37 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 Pfam PF10410 DnaB-helicase binding domain of primase 370 424 2.5E-12 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 Gene3D G3DSA:1.20.50.20 368 426 5.6E-28 T 22-04-2016 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 Pfam PF13155 Toprim-like 263 348 5.1E-14 T 22-04-2016 APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 SMART SM00493 259 330 8.0E-19 T 22-04-2016 IPR006171 Toprim domain APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 Gene3D G3DSA:1.10.860.10 439 580 3.0E-51 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APT61_RS03445 6dff1899a84110a83ed4eefee1d5ec68 581 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 2.0E-151 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 APT61_RS17345 3cd9cd08bae9d1f649e0b8f4a5f7b08a 315 PANTHER PTHR22888 1 268 2.6E-159 T 22-04-2016 APT61_RS17345 3cd9cd08bae9d1f649e0b8f4a5f7b08a 315 Gene3D G3DSA:2.60.40.420 122 279 4.0E-41 T 22-04-2016 IPR008972 Cupredoxin APT61_RS17345 3cd9cd08bae9d1f649e0b8f4a5f7b08a 315 PANTHER PTHR22888:SF13 1 268 2.6E-159 T 22-04-2016 APT61_RS17345 3cd9cd08bae9d1f649e0b8f4a5f7b08a 315 Pfam PF06481 COX Aromatic Rich Motif 239 285 7.3E-18 T 22-04-2016 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 APT61_RS17345 3cd9cd08bae9d1f649e0b8f4a5f7b08a 315 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 218 6.1E-5 T 22-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 APT61_RS17345 3cd9cd08bae9d1f649e0b8f4a5f7b08a 315 PIRSF PIRSF000292 1 313 2.0E-132 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 APT61_RS17345 3cd9cd08bae9d1f649e0b8f4a5f7b08a 315 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 13 239 8.0E-122 T 22-04-2016 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 APT61_RS17345 3cd9cd08bae9d1f649e0b8f4a5f7b08a 315 SUPERFAMILY SSF81464 29 116 1.64E-23 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 APT61_RS17345 3cd9cd08bae9d1f649e0b8f4a5f7b08a 315 Gene3D G3DSA:1.10.287.90 29 113 1.4E-36 T 22-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 APT61_RS17345 3cd9cd08bae9d1f649e0b8f4a5f7b08a 315 SUPERFAMILY SSF49503 122 281 1.06E-52 T 22-04-2016 IPR008972 Cupredoxin APT61_RS11395 c0bff56b63a6191be7f7709fa9c24d05 88 Gene3D G3DSA:2.40.128.130 6 88 3.6E-8 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS11395 c0bff56b63a6191be7f7709fa9c24d05 88 SUPERFAMILY SSF103515 10 88 6.54E-7 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS11395 c0bff56b63a6191be7f7709fa9c24d05 88 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 9 88 5.1E-7 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 APT61_RS08525 ad85d8b8417c5c5c20bceb4f67c3a21f 323 PANTHER PTHR10108 57 322 1.5E-137 T 22-04-2016 APT61_RS08525 ad85d8b8417c5c5c20bceb4f67c3a21f 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 321 3.6E-146 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 APT61_RS08525 ad85d8b8417c5c5c20bceb4f67c3a21f 323 Hamap MF_01590 tRNA (mo5U34)-methyltransferase [cmoB]. 12 322 53.943 T 22-04-2016 IPR010017 tRNA (mo5U34)-methyltransferase GO:0002098|GO:0016300 APT61_RS08525 ad85d8b8417c5c5c20bceb4f67c3a21f 323 PANTHER PTHR10108:SF847 57 322 1.5E-137 T 22-04-2016 APT61_RS08525 ad85d8b8417c5c5c20bceb4f67c3a21f 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 8.1E-168 T 22-04-2016 IPR027555 tRNA (mo5U34)-methyltransferase-like APT61_RS08525 ad85d8b8417c5c5c20bceb4f67c3a21f 323 SUPERFAMILY SSF53335 91 323 2.22E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS08525 ad85d8b8417c5c5c20bceb4f67c3a21f 323 Gene3D G3DSA:3.40.50.150 91 313 5.9E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS17480 7b22ec86ddc8467de7de15cd798e30ab 356 SUPERFAMILY SSF111337 1 343 3.79E-139 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS17480 7b22ec86ddc8467de7de15cd798e30ab 356 Pfam PF02547 Queuosine biosynthesis protein 4 343 2.1E-133 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS17480 7b22ec86ddc8467de7de15cd798e30ab 356 PANTHER PTHR30307:SF0 2 350 2.5E-193 T 22-04-2016 APT61_RS17480 7b22ec86ddc8467de7de15cd798e30ab 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 1.7E-167 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS17480 7b22ec86ddc8467de7de15cd798e30ab 356 Gene3D G3DSA:3.40.1780.10 1 62 1.7E-101 T 22-04-2016 APT61_RS17480 7b22ec86ddc8467de7de15cd798e30ab 356 Gene3D G3DSA:3.40.1780.10 179 344 1.7E-101 T 22-04-2016 APT61_RS17480 7b22ec86ddc8467de7de15cd798e30ab 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.832 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS17480 7b22ec86ddc8467de7de15cd798e30ab 356 Gene3D G3DSA:2.40.10.240 64 142 2.2E-19 T 22-04-2016 APT61_RS17480 7b22ec86ddc8467de7de15cd798e30ab 356 PANTHER PTHR30307 2 350 2.5E-193 T 22-04-2016 APT61_RS05510 8c17a76844b95d565847a80e42483b66 732 Gene3D G3DSA:3.40.50.300 238 391 6.3E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05510 8c17a76844b95d565847a80e42483b66 732 Pfam PF00270 DEAD/DEAH box helicase 26 198 2.6E-28 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APT61_RS05510 8c17a76844b95d565847a80e42483b66 732 PANTHER PTHR24031:SF122 8 222 8.3E-55 T 22-04-2016 APT61_RS05510 8c17a76844b95d565847a80e42483b66 732 PANTHER PTHR24031:SF122 416 426 8.3E-55 T 22-04-2016 APT61_RS05510 8c17a76844b95d565847a80e42483b66 732 PANTHER PTHR24031:SF122 255 377 8.3E-55 T 22-04-2016 APT61_RS05510 8c17a76844b95d565847a80e42483b66 732 Gene3D G3DSA:3.40.50.300 7 200 1.0E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05510 8c17a76844b95d565847a80e42483b66 732 SMART SM00487 20 231 1.3E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS05510 8c17a76844b95d565847a80e42483b66 732 Pfam PF00271 Helicase conserved C-terminal domain 261 363 2.3E-13 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS05510 8c17a76844b95d565847a80e42483b66 732 SUPERFAMILY SSF52540 33 199 1.26E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05510 8c17a76844b95d565847a80e42483b66 732 SUPERFAMILY SSF52540 231 376 1.26E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05510 8c17a76844b95d565847a80e42483b66 732 PANTHER PTHR24031 8 222 8.3E-55 T 22-04-2016 APT61_RS05510 8c17a76844b95d565847a80e42483b66 732 PANTHER PTHR24031 416 426 8.3E-55 T 22-04-2016 APT61_RS05510 8c17a76844b95d565847a80e42483b66 732 PANTHER PTHR24031 255 377 8.3E-55 T 22-04-2016 APT61_RS05510 8c17a76844b95d565847a80e42483b66 732 SMART SM00490 280 364 3.4E-10 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS16980 c89ef9b8a1dff6a48acfd740386dcbdd 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 APT61_RS16980 c89ef9b8a1dff6a48acfd740386dcbdd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.9E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APT61_RS16980 c89ef9b8a1dff6a48acfd740386dcbdd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.9E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APT61_RS16980 c89ef9b8a1dff6a48acfd740386dcbdd 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.9E-11 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APT61_RS16980 c89ef9b8a1dff6a48acfd740386dcbdd 164 PANTHER PTHR11071 1 164 1.8E-82 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APT61_RS16980 c89ef9b8a1dff6a48acfd740386dcbdd 164 PIRSF PIRSF001467 1 164 9.8E-28 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APT61_RS16980 c89ef9b8a1dff6a48acfd740386dcbdd 164 PANTHER PTHR11071:SF192 1 164 1.8E-82 T 22-04-2016 APT61_RS16980 c89ef9b8a1dff6a48acfd740386dcbdd 164 Gene3D G3DSA:2.40.100.10 2 162 1.3E-55 T 22-04-2016 IPR029000 Cyclophilin-like domain APT61_RS16980 c89ef9b8a1dff6a48acfd740386dcbdd 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 162 9.5E-49 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APT61_RS16980 c89ef9b8a1dff6a48acfd740386dcbdd 164 SUPERFAMILY SSF50891 1 162 1.24E-59 T 22-04-2016 IPR029000 Cyclophilin-like domain APT61_RS19750 032b43ad83289b09aedf4890e97ba65e 493 PIRSF PIRSF006060 2 490 4.0E-62 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS19750 032b43ad83289b09aedf4890e97ba65e 493 PANTHER PTHR11785 18 455 3.2E-57 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS19750 032b43ad83289b09aedf4890e97ba65e 493 Pfam PF13520 Amino acid permease 25 453 1.6E-44 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS21990 00f6edc2ac5f97e3f3153a6d39f698bd 432 PANTHER PTHR10314 38 130 3.4E-214 T 22-04-2016 APT61_RS21990 00f6edc2ac5f97e3f3153a6d39f698bd 432 PANTHER PTHR10314 9 20 3.4E-214 T 22-04-2016 APT61_RS21990 00f6edc2ac5f97e3f3153a6d39f698bd 432 PANTHER PTHR10314 154 431 3.4E-214 T 22-04-2016 APT61_RS21990 00f6edc2ac5f97e3f3153a6d39f698bd 432 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 432 265.736 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 APT61_RS21990 00f6edc2ac5f97e3f3153a6d39f698bd 432 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 78 403 1.6E-57 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS21990 00f6edc2ac5f97e3f3153a6d39f698bd 432 SUPERFAMILY SSF53686 73 427 9.19E-57 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS21990 00f6edc2ac5f97e3f3153a6d39f698bd 432 PANTHER PTHR10314:SF9 38 130 3.4E-214 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 APT61_RS21990 00f6edc2ac5f97e3f3153a6d39f698bd 432 PANTHER PTHR10314:SF9 9 20 3.4E-214 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 APT61_RS21990 00f6edc2ac5f97e3f3153a6d39f698bd 432 PANTHER PTHR10314:SF9 154 431 3.4E-214 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 APT61_RS21990 00f6edc2ac5f97e3f3153a6d39f698bd 432 Gene3D G3DSA:3.40.50.1100 179 428 3.5E-46 T 22-04-2016 APT61_RS21990 00f6edc2ac5f97e3f3153a6d39f698bd 432 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 107 121 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APT61_RS21990 00f6edc2ac5f97e3f3153a6d39f698bd 432 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 8 428 1.0E-225 T 22-04-2016 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 APT61_RS15270 d771a4f537d74b63178fc15f7da1b851 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APT61_RS15270 d771a4f537d74b63178fc15f7da1b851 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 9.7E-92 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 APT61_RS15270 d771a4f537d74b63178fc15f7da1b851 243 PANTHER PTHR18966:SF194 4 243 1.0E-160 T 22-04-2016 APT61_RS15270 d771a4f537d74b63178fc15f7da1b851 243 PANTHER PTHR18966 4 243 1.0E-160 T 22-04-2016 APT61_RS15270 d771a4f537d74b63178fc15f7da1b851 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 1.3E-69 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS15270 d771a4f537d74b63178fc15f7da1b851 243 SUPERFAMILY SSF53850 1 242 7.06E-74 T 22-04-2016 APT61_RS15270 d771a4f537d74b63178fc15f7da1b851 243 SMART SM00079 22 243 4.5E-4 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 APT61_RS15270 d771a4f537d74b63178fc15f7da1b851 243 SMART SM00062 22 243 6.7E-88 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS15270 d771a4f537d74b63178fc15f7da1b851 243 Gene3D G3DSA:3.40.190.10 128 201 9.6E-28 T 22-04-2016 APT61_RS15270 d771a4f537d74b63178fc15f7da1b851 243 Gene3D G3DSA:3.40.190.10 7 127 2.0E-46 T 22-04-2016 APT61_RS09175 2531d7b904a4885232d0f146680e1178 289 SUPERFAMILY SSF54211 1 161 1.21E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS09175 2531d7b904a4885232d0f146680e1178 289 Pfam PF00288 GHMP kinases N terminal domain 91 148 8.0E-10 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APT61_RS09175 2531d7b904a4885232d0f146680e1178 289 Pfam PF08544 GHMP kinases C terminal 212 259 5.8E-6 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APT61_RS09175 2531d7b904a4885232d0f146680e1178 289 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 282 1.3E-114 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS09175 2531d7b904a4885232d0f146680e1178 289 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 275 32.417 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS09175 2531d7b904a4885232d0f146680e1178 289 PANTHER PTHR20861 1 278 3.0E-104 T 22-04-2016 APT61_RS09175 2531d7b904a4885232d0f146680e1178 289 Gene3D G3DSA:3.30.70.890 167 281 7.4E-44 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APT61_RS09175 2531d7b904a4885232d0f146680e1178 289 PANTHER PTHR20861:SF2 1 278 3.0E-104 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS09175 2531d7b904a4885232d0f146680e1178 289 Gene3D G3DSA:3.30.230.10 4 163 1.5E-53 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS09175 2531d7b904a4885232d0f146680e1178 289 PIRSF PIRSF010376 1 283 5.2E-84 T 22-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS09175 2531d7b904a4885232d0f146680e1178 289 SUPERFAMILY SSF55060 165 280 2.73E-36 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APT61_RS18685 eca37314ae0a5c6c626d9d50795285fc 363 PANTHER PTHR11835:SF35 1 361 9.6E-205 T 22-04-2016 APT61_RS18685 eca37314ae0a5c6c626d9d50795285fc 363 SMART SM01329 6 355 1.1E-201 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APT61_RS18685 eca37314ae0a5c6c626d9d50795285fc 363 SUPERFAMILY SSF53659 2 360 9.0E-123 T 22-04-2016 APT61_RS18685 eca37314ae0a5c6c626d9d50795285fc 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APT61_RS18685 eca37314ae0a5c6c626d9d50795285fc 363 Gene3D G3DSA:3.40.718.10 2 358 7.8E-131 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APT61_RS18685 eca37314ae0a5c6c626d9d50795285fc 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 2.9E-169 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 APT61_RS18685 eca37314ae0a5c6c626d9d50795285fc 363 PANTHER PTHR11835 1 361 9.6E-205 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APT61_RS18685 eca37314ae0a5c6c626d9d50795285fc 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 1.1E-138 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APT61_RS18685 eca37314ae0a5c6c626d9d50795285fc 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.504 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 APT61_RS19970 188e35436bc935a815891ec5097b50c6 246 SUPERFAMILY SSF51569 53 205 9.52E-7 T 22-04-2016 APT61_RS19970 188e35436bc935a815891ec5097b50c6 246 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 8 243 3.2E-124 T 22-04-2016 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APT61_RS19970 188e35436bc935a815891ec5097b50c6 246 Pfam PF07071 Protein of unknown function (DUF1341) 8 225 2.9E-114 T 22-04-2016 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 PANTHER PTHR32145 1 472 1.1E-233 T 22-04-2016 APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 Pfam PF00753 Metallo-beta-lactamase superfamily 34 175 1.0E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 Pfam PF00301 Rubredoxin 428 474 1.3E-20 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 Gene3D G3DSA:2.20.28.10 428 476 3.9E-21 T 22-04-2016 IPR004039 Rubredoxin-type fold APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 Pfam PF00258 Flavodoxin 256 388 3.0E-12 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 PANTHER PTHR32145:SF2 1 472 1.1E-233 T 22-04-2016 APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 Gene3D G3DSA:3.40.50.360 249 394 5.7E-50 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 SUPERFAMILY SSF56281 8 285 3.14E-51 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 SUPERFAMILY SSF52218 251 396 6.29E-34 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 PRINTS PR00163 Rubredoxin signature 428 444 9.4E-7 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 PRINTS PR00163 Rubredoxin signature 458 474 9.4E-7 T 22-04-2016 IPR024935 Rubredoxin domain GO:0005506 APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 SUPERFAMILY SSF57802 428 479 8.25E-19 T 22-04-2016 APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 Gene3D G3DSA:3.60.15.10 5 246 6.1E-90 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 478 92.826 T 22-04-2016 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 UniPathway: UPA00638 APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 SMART SM00849 34 227 2.6E-28 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS04825 decc860629d5b610614a6a9fdf73e9f8 482 PIRSF PIRSF005243 1 399 1.4E-162 T 22-04-2016 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 APT61_RS02575 2688a272ae9bdf2a5e9d465c718eb3fb 167 Pfam PF00583 Acetyltransferase (GNAT) family 66 145 6.1E-13 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS02575 2688a272ae9bdf2a5e9d465c718eb3fb 167 SUPERFAMILY SSF55729 11 167 4.29E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS02575 2688a272ae9bdf2a5e9d465c718eb3fb 167 PANTHER PTHR13947 11 167 1.6E-58 T 22-04-2016 APT61_RS02575 2688a272ae9bdf2a5e9d465c718eb3fb 167 PANTHER PTHR13947:SF7 11 167 1.6E-58 T 22-04-2016 APT61_RS02575 2688a272ae9bdf2a5e9d465c718eb3fb 167 Gene3D G3DSA:3.40.630.30 11 167 2.4E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS07825 7f756ad5a27ac433931317094278053b 203 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 6.4E-32 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 APT61_RS07825 7f756ad5a27ac433931317094278053b 203 PANTHER PTHR21256 1 203 7.0E-120 T 22-04-2016 APT61_RS07825 7f756ad5a27ac433931317094278053b 203 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 18.119 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APT61_RS07825 7f756ad5a27ac433931317094278053b 203 SUPERFAMILY SSF101386 115 202 8.72E-24 T 22-04-2016 APT61_RS07825 7f756ad5a27ac433931317094278053b 203 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 5.0E-25 T 22-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 APT61_RS07825 7f756ad5a27ac433931317094278053b 203 SUPERFAMILY SSF141734 5 122 2.09E-47 T 22-04-2016 APT61_RS07825 7f756ad5a27ac433931317094278053b 203 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 198 2.0E-30 T 22-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APT61_RS07825 7f756ad5a27ac433931317094278053b 203 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 38.21 T 22-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 APT61_RS07825 7f756ad5a27ac433931317094278053b 203 PANTHER PTHR21256:SF16 1 203 7.0E-120 T 22-04-2016 APT61_RS07825 7f756ad5a27ac433931317094278053b 203 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 202 3.1E-18 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 Pfam PF13432 Tetratricopeptide repeat 277 332 1.7E-10 T 22-04-2016 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 SMART SM00028 305 338 26.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 SMART SM00028 786 823 360.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 SMART SM00028 42 75 80.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 SMART SM00028 271 304 47.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 SMART SM00028 386 419 84.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 SMART SM00028 464 497 52.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 PANTHER PTHR23083 43 109 1.3E-19 T 22-04-2016 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 PANTHER PTHR23083 267 333 1.3E-19 T 22-04-2016 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 PANTHER PTHR23083 686 812 1.3E-19 T 22-04-2016 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 PANTHER PTHR23083 585 643 1.3E-19 T 22-04-2016 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 PANTHER PTHR23083 415 507 1.3E-19 T 22-04-2016 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 Gene3D G3DSA:1.25.40.10 247 444 1.0E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 Gene3D G3DSA:1.25.40.10 176 208 4.4E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 Gene3D G3DSA:1.25.40.10 690 812 5.4E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 Gene3D G3DSA:1.25.40.10 44 140 4.4E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 925 1285 2.2E-136 T 22-04-2016 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 UniPathway: UPA00694 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 PRINTS PR01441 Cellulose synthase subunit C signature 1150 1174 1.9E-25 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 PRINTS PR01441 Cellulose synthase subunit C signature 497 517 1.9E-25 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 PRINTS PR01441 Cellulose synthase subunit C signature 1190 1211 1.9E-25 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 PRINTS PR01441 Cellulose synthase subunit C signature 789 818 1.9E-25 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 PRINTS PR01441 Cellulose synthase subunit C signature 190 207 1.9E-25 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 PRINTS PR01441 Cellulose synthase subunit C signature 160 172 1.9E-25 T 22-04-2016 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 UniPathway: UPA00694 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 SUPERFAMILY SSF48452 176 207 3.48E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 SUPERFAMILY SSF48452 30 112 3.48E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 SUPERFAMILY SSF48452 692 743 5.06E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 SUPERFAMILY SSF48452 392 443 5.06E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 SUPERFAMILY SSF48452 478 514 5.06E-14 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 SUPERFAMILY SSF48452 275 445 9.86E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 Gene3D G3DSA:1.25.40.10 466 535 1.2E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 Gene3D G3DSA:1.25.40.10 579 630 1.2E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 Pfam PF14559 Tetratricopeptide repeat 475 531 1.5E-7 T 22-04-2016 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 Pfam PF14559 Tetratricopeptide repeat 399 452 9.4E-6 T 22-04-2016 APT61_RS03200 eb4dee6aa8238fec3f17e5fd2250ed4c 1288 SUPERFAMILY SSF48452 467 603 3.32E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.081 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 PANTHER PTHR11735 1 336 1.3E-169 T 22-04-2016 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 1.5E-130 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 Gene3D G3DSA:3.30.420.40 1 159 5.6E-51 T 22-04-2016 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 3.0E-137 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 PANTHER PTHR11735:SF6 1 336 1.3E-169 T 22-04-2016 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 8.2E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 8.2E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 8.2E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 8.2E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 8.2E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 8.2E-53 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 SUPERFAMILY SSF53067 1 309 1.81E-45 T 22-04-2016 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 Pfam PF00814 Glycoprotease family 24 307 1.3E-103 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APT61_RS03455 1475defcacda22d3605b43c209f68d6a 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 22-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APT61_RS13505 f0ff8c1ed981ab2491894bb2bac77ada 401 SUPERFAMILY SSF111369 42 124 2.75E-6 T 22-04-2016 APT61_RS13505 f0ff8c1ed981ab2491894bb2bac77ada 401 Pfam PF13533 Biotin-lipoyl like 52 97 3.3E-11 T 22-04-2016 APT61_RS13505 f0ff8c1ed981ab2491894bb2bac77ada 401 PANTHER PTHR30386 11 401 6.3E-100 T 22-04-2016 APT61_RS13505 f0ff8c1ed981ab2491894bb2bac77ada 401 Pfam PF13437 HlyD family secretion protein 238 347 4.7E-16 T 22-04-2016 APT61_RS13505 f0ff8c1ed981ab2491894bb2bac77ada 401 SUPERFAMILY SSF56954 130 203 3.27E-5 T 22-04-2016 APT61_RS13505 f0ff8c1ed981ab2491894bb2bac77ada 401 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 63 83 1.2E-33 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS13505 f0ff8c1ed981ab2491894bb2bac77ada 401 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 365 380 1.2E-33 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS13505 f0ff8c1ed981ab2491894bb2bac77ada 401 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 21 44 1.2E-33 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS13505 f0ff8c1ed981ab2491894bb2bac77ada 401 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 380 400 1.2E-33 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS13505 f0ff8c1ed981ab2491894bb2bac77ada 401 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 249 270 1.2E-33 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS13505 f0ff8c1ed981ab2491894bb2bac77ada 401 Gene3D G3DSA:2.40.50.100 234 269 2.3E-13 T 22-04-2016 APT61_RS13505 f0ff8c1ed981ab2491894bb2bac77ada 401 Gene3D G3DSA:2.40.50.100 52 85 2.3E-13 T 22-04-2016 APT61_RS13505 f0ff8c1ed981ab2491894bb2bac77ada 401 Gene3D G3DSA:1.20.1600.10 139 204 5.2E-4 T 22-04-2016 APT61_RS13505 f0ff8c1ed981ab2491894bb2bac77ada 401 PANTHER PTHR30386:SF4 11 401 6.3E-100 T 22-04-2016 APT61_RS18580 670d9903470a535a39fa1dbbb142aa72 305 SUPERFAMILY SSF54211 3 124 5.69E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS18580 670d9903470a535a39fa1dbbb142aa72 305 Gene3D G3DSA:3.30.1700.10 129 283 1.5E-62 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APT61_RS18580 670d9903470a535a39fa1dbbb142aa72 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 1.4E-163 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APT61_RS18580 670d9903470a535a39fa1dbbb142aa72 305 SUPERFAMILY SSF54211 134 278 6.14E-54 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS18580 670d9903470a535a39fa1dbbb142aa72 305 Gene3D G3DSA:3.30.230.20 3 124 5.4E-46 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APT61_RS18580 670d9903470a535a39fa1dbbb142aa72 305 PANTHER PTHR33694 1 305 9.9E-149 T 22-04-2016 APT61_RS18580 670d9903470a535a39fa1dbbb142aa72 305 PANTHER PTHR33694:SF1 1 305 9.9E-149 T 22-04-2016 APT61_RS18580 670d9903470a535a39fa1dbbb142aa72 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 7.6E-109 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APT61_RS18580 670d9903470a535a39fa1dbbb142aa72 305 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 2 281 49.159 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 APT61_RS21675 f533790da781d257841ff7f1de0c4da8 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 22-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS21675 f533790da781d257841ff7f1de0c4da8 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 1.6E-27 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS21675 f533790da781d257841ff7f1de0c4da8 55 SUPERFAMILY SSF57829 1 53 3.97E-20 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APT61_RS21675 f533790da781d257841ff7f1de0c4da8 55 Pfam PF00471 Ribosomal protein L33 7 53 1.4E-18 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS21675 f533790da781d257841ff7f1de0c4da8 55 PANTHER PTHR15238 1 55 3.4E-25 T 22-04-2016 APT61_RS21675 f533790da781d257841ff7f1de0c4da8 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.768 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS09020 e09c5b845ba50d39a05f0e4d065cd241 159 Gene3D G3DSA:3.10.450.50 8 158 1.6E-36 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS09020 e09c5b845ba50d39a05f0e4d065cd241 159 Pfam PF00866 Ring hydroxylating beta subunit 17 148 1.6E-16 T 22-04-2016 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 APT61_RS09020 e09c5b845ba50d39a05f0e4d065cd241 159 SUPERFAMILY SSF54427 7 159 3.35E-33 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS20535 2bb98296beccf0d3e820d93d96b54f56 280 Gene3D G3DSA:1.10.10.60 224 269 2.7E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS20535 2bb98296beccf0d3e820d93d96b54f56 280 SUPERFAMILY SSF46689 222 269 5.38E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS20535 2bb98296beccf0d3e820d93d96b54f56 280 Gene3D G3DSA:2.60.120.280 14 152 3.3E-22 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS20535 2bb98296beccf0d3e820d93d96b54f56 280 SUPERFAMILY SSF46689 173 220 2.51E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS20535 2bb98296beccf0d3e820d93d96b54f56 280 SMART SM00342 186 268 7.2E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS20535 2bb98296beccf0d3e820d93d96b54f56 280 Pfam PF02311 AraC-like ligand binding domain 14 152 3.3E-25 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS20535 2bb98296beccf0d3e820d93d96b54f56 280 PANTHER PTHR11019:SF108 21 276 1.5E-76 T 22-04-2016 APT61_RS20535 2bb98296beccf0d3e820d93d96b54f56 280 Pfam PF12833 Helix-turn-helix domain 192 269 1.2E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS20535 2bb98296beccf0d3e820d93d96b54f56 280 SUPERFAMILY SSF51215 12 152 2.22E-25 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS20535 2bb98296beccf0d3e820d93d96b54f56 280 PANTHER PTHR11019 21 276 1.5E-76 T 22-04-2016 APT61_RS20535 2bb98296beccf0d3e820d93d96b54f56 280 Gene3D G3DSA:1.10.10.60 170 223 8.5E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS16395 5bca3fb532ef321f02886f7995cf927f 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 338 6.2E-70 T 22-04-2016 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS16395 5bca3fb532ef321f02886f7995cf927f 343 Gene3D G3DSA:1.20.272.20 223 340 5.4E-50 T 22-04-2016 APT61_RS16395 5bca3fb532ef321f02886f7995cf927f 343 PANTHER PTHR34388 1 342 1.2E-87 T 22-04-2016 APT61_RS16395 5bca3fb532ef321f02886f7995cf927f 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 2.5E-104 T 22-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 APT61_RS16395 5bca3fb532ef321f02886f7995cf927f 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 1.8E-45 T 22-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 APT61_RS16395 5bca3fb532ef321f02886f7995cf927f 343 Gene3D G3DSA:1.10.8.60 144 222 3.8E-37 T 22-04-2016 APT61_RS16395 5bca3fb532ef321f02886f7995cf927f 343 SUPERFAMILY SSF52540 1 210 1.36E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16395 5bca3fb532ef321f02886f7995cf927f 343 SUPERFAMILY SSF48019 212 334 1.62E-35 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APT61_RS16395 5bca3fb532ef321f02886f7995cf927f 343 Gene3D G3DSA:3.40.50.300 1 140 4.7E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11995 372ee8e3ad5f7271be335921756e871f 236 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 60 234 1.3E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS11995 372ee8e3ad5f7271be335921756e871f 236 PANTHER PTHR30151:SF23 25 236 1.3E-71 T 22-04-2016 APT61_RS11995 372ee8e3ad5f7271be335921756e871f 236 PANTHER PTHR30151 25 236 1.3E-71 T 22-04-2016 APT61_RS11995 372ee8e3ad5f7271be335921756e871f 236 Gene3D G3DSA:1.10.3720.10 39 220 1.4E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS11995 372ee8e3ad5f7271be335921756e871f 236 SUPERFAMILY SSF161098 42 222 1.14E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS05325 e57f1b49a557b5c69a8f3afb4772732e 150 PANTHER PTHR34582:SF6 1 149 6.0E-29 T 22-04-2016 APT61_RS05325 e57f1b49a557b5c69a8f3afb4772732e 150 Gene3D G3DSA:3.30.240.20 82 148 4.3E-18 T 22-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain APT61_RS05325 e57f1b49a557b5c69a8f3afb4772732e 150 PANTHER PTHR34582 1 149 6.0E-29 T 22-04-2016 APT61_RS05325 e57f1b49a557b5c69a8f3afb4772732e 150 Pfam PF04239 Protein of unknown function (DUF421) 85 148 7.1E-16 T 22-04-2016 IPR007353 Protein of unknown function DUF421 APT61_RS14615 68ee723eb6e0d92175fe579cde60e5e5 368 PANTHER PTHR30505:SF0 15 368 9.7E-69 T 22-04-2016 APT61_RS14615 68ee723eb6e0d92175fe579cde60e5e5 368 PANTHER PTHR30505 15 368 9.7E-69 T 22-04-2016 APT61_RS14615 68ee723eb6e0d92175fe579cde60e5e5 368 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 15 342 7.6E-61 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 APT61_RS15765 97e56e16b3872998f01ff0dd3fff18bf 377 Pfam PF12698 ABC-2 family transporter protein 29 369 8.9E-38 T 22-04-2016 APT61_RS15765 97e56e16b3872998f01ff0dd3fff18bf 377 PANTHER PTHR30294 4 377 5.1E-295 T 22-04-2016 APT61_RS15765 97e56e16b3872998f01ff0dd3fff18bf 377 PANTHER PTHR30294:SF17 4 377 5.1E-295 T 22-04-2016 APT61_RS00945 15bfe1fab8f9ad0a05315331d9720ef5 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 13 242 7.4E-39 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00945 15bfe1fab8f9ad0a05315331d9720ef5 246 SUPERFAMILY SSF69618 1 245 1.24E-52 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00945 15bfe1fab8f9ad0a05315331d9720ef5 246 Gene3D G3DSA:3.40.50.10090 29 146 1.9E-12 T 22-04-2016 APT61_RS00945 15bfe1fab8f9ad0a05315331d9720ef5 246 PANTHER PTHR38042 1 246 9.3E-85 T 22-04-2016 APT61_RS00945 15bfe1fab8f9ad0a05315331d9720ef5 246 PANTHER PTHR38042:SF1 1 246 9.3E-85 T 22-04-2016 APT61_RS00945 15bfe1fab8f9ad0a05315331d9720ef5 246 Gene3D G3DSA:3.40.50.10090 147 245 3.0E-8 T 22-04-2016 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 Gene3D G3DSA:1.10.8.60 501 584 3.9E-32 T 22-04-2016 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 4.7E-57 T 22-04-2016 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 4.7E-57 T 22-04-2016 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 4.7E-57 T 22-04-2016 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 4.7E-57 T 22-04-2016 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 4.7E-57 T 22-04-2016 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 Gene3D G3DSA:3.30.230.10 590 771 8.1E-78 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.8E-17 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 SUPERFAMILY SSF88697 10 201 1.39E-52 T 22-04-2016 IPR015947 PUA-like domain APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 1.2E-43 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 SMART SM00382 348 492 3.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.367 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 Gene3D G3DSA:3.40.50.300 310 500 8.0E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 SMART SM00464 10 202 2.2E-86 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 SUPERFAMILY SSF54211 595 771 6.07E-60 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 PANTHER PTHR10046:SF43 8 776 0.0 T 22-04-2016 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 SUPERFAMILY SSF52540 313 587 7.19E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 PIRSF PIRSF001174 1 775 0.0 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 9.4E-98 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 APT61_RS17310 2e20710be7ebb0c5a4e3891414b6795e 784 PANTHER PTHR10046 8 776 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 APT61_RS21305 66b97a508ded2daa4ef6b94ca5697b69 400 Gene3D G3DSA:1.20.1250.20 212 393 5.5E-19 T 22-04-2016 APT61_RS21305 66b97a508ded2daa4ef6b94ca5697b69 400 PANTHER PTHR11360 6 396 1.3E-97 T 22-04-2016 APT61_RS21305 66b97a508ded2daa4ef6b94ca5697b69 400 Gene3D G3DSA:1.20.1250.20 10 193 1.3E-18 T 22-04-2016 APT61_RS21305 66b97a508ded2daa4ef6b94ca5697b69 400 SUPERFAMILY SSF103473 7 388 6.41E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS21305 66b97a508ded2daa4ef6b94ca5697b69 400 PANTHER PTHR11360:SF3 6 396 1.3E-97 T 22-04-2016 APT61_RS21305 66b97a508ded2daa4ef6b94ca5697b69 400 TIGRFAM TIGR00890 2A0111: oxalate/formate antiporter family transporter 9 383 2.2E-137 T 22-04-2016 IPR004741 Oxalate/formate antiporter family transporter GO:0005215|GO:0006810|GO:0016021 APT61_RS21305 66b97a508ded2daa4ef6b94ca5697b69 400 Pfam PF07690 Major Facilitator Superfamily 23 230 2.3E-18 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS04910 135539538b3884025083ec6a7c68410a 514 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 512 4.7E-271 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 APT61_RS04910 135539538b3884025083ec6a7c68410a 514 Pfam PF04262 Glutamate-cysteine ligase 9 376 2.1E-171 T 22-04-2016 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 APT61_RS04910 135539538b3884025083ec6a7c68410a 514 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 514 230.737 T 22-04-2016 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255|UniPathway: UPA00142 APT61_RS04910 135539538b3884025083ec6a7c68410a 514 PANTHER PTHR38761 2 511 9.2E-302 T 22-04-2016 APT61_RS04910 135539538b3884025083ec6a7c68410a 514 SUPERFAMILY SSF55931 4 511 3.4E-202 T 22-04-2016 APT61_RS18755 47bc8e74b39c3c4e27a927ecbafc7405 140 SUPERFAMILY SSF54427 7 138 2.15E-28 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS18755 47bc8e74b39c3c4e27a927ecbafc7405 140 Pfam PF07366 SnoaL-like polyketide cyclase 12 137 6.2E-29 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain APT61_RS18755 47bc8e74b39c3c4e27a927ecbafc7405 140 PANTHER PTHR38436 7 137 2.6E-17 T 22-04-2016 APT61_RS18755 47bc8e74b39c3c4e27a927ecbafc7405 140 Gene3D G3DSA:3.10.450.50 7 138 1.3E-35 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS05450 6ce9b737889e2d456130e1fe48952be0 496 PANTHER PTHR23508:SF3 4 228 0.0 T 22-04-2016 APT61_RS05450 6ce9b737889e2d456130e1fe48952be0 496 PANTHER PTHR23508:SF3 266 478 0.0 T 22-04-2016 APT61_RS05450 6ce9b737889e2d456130e1fe48952be0 496 TIGRFAM TIGR00891 2A0112: MFS transporter, sialate:H+ symporter (SHS) family 9 441 5.8E-179 T 22-04-2016 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 APT61_RS05450 6ce9b737889e2d456130e1fe48952be0 496 Gene3D G3DSA:1.20.1250.20 18 204 1.6E-33 T 22-04-2016 APT61_RS05450 6ce9b737889e2d456130e1fe48952be0 496 Pfam PF07690 Major Facilitator Superfamily 26 288 4.1E-25 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS05450 6ce9b737889e2d456130e1fe48952be0 496 PANTHER PTHR23508 4 228 0.0 T 22-04-2016 APT61_RS05450 6ce9b737889e2d456130e1fe48952be0 496 PANTHER PTHR23508 266 478 0.0 T 22-04-2016 APT61_RS05450 6ce9b737889e2d456130e1fe48952be0 496 Gene3D G3DSA:1.20.1250.20 275 457 3.7E-18 T 22-04-2016 APT61_RS05450 6ce9b737889e2d456130e1fe48952be0 496 SUPERFAMILY SSF103473 10 203 1.31E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS05450 6ce9b737889e2d456130e1fe48952be0 496 SUPERFAMILY SSF103473 267 458 1.31E-62 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS05450 6ce9b737889e2d456130e1fe48952be0 496 Hamap MF_01238 Putative sialic acid transporter [nanT]. 1 488 52.718 T 22-04-2016 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 APT61_RS03610 56c22da9b140fc3f47bc2a9ddb8a8619 140 Pfam PF06853 Protein of unknown function (DUF1249) 21 134 7.0E-44 T 22-04-2016 IPR009659 Protein of unknown function DUF1249 APT61_RS03610 56c22da9b140fc3f47bc2a9ddb8a8619 140 PANTHER PTHR38774 1 139 5.9E-62 T 22-04-2016 APT61_RS03610 56c22da9b140fc3f47bc2a9ddb8a8619 140 PANTHER PTHR38774:SF1 1 139 5.9E-62 T 22-04-2016 APT61_RS14965 a4db5a13d2c3140bef3085d9fa94e2a3 227 SUPERFAMILY SSF52540 6 224 1.78E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14965 a4db5a13d2c3140bef3085d9fa94e2a3 227 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.677 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APT61_RS14965 a4db5a13d2c3140bef3085d9fa94e2a3 227 Gene3D G3DSA:3.40.50.300 6 221 2.7E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14965 a4db5a13d2c3140bef3085d9fa94e2a3 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 1.4E-96 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APT61_RS14965 a4db5a13d2c3140bef3085d9fa94e2a3 227 PANTHER PTHR21299 6 226 2.9E-87 T 22-04-2016 APT61_RS14965 a4db5a13d2c3140bef3085d9fa94e2a3 227 Pfam PF02224 Cytidylate kinase 8 221 1.8E-84 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APT61_RS10820 ca841f428e072f13f2877818266a3e0a 179 Pfam PF02224 Cytidylate kinase 3 36 2.0E-4 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 APT61_RS10820 ca841f428e072f13f2877818266a3e0a 179 SUPERFAMILY SSF52540 2 103 2.44E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10820 ca841f428e072f13f2877818266a3e0a 179 PANTHER PTHR37816 1 176 8.7E-29 T 22-04-2016 APT61_RS10820 ca841f428e072f13f2877818266a3e0a 179 Gene3D G3DSA:3.40.50.300 2 137 1.2E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10820 ca841f428e072f13f2877818266a3e0a 179 PANTHER PTHR37816:SF1 1 176 8.7E-29 T 22-04-2016 APT61_RS11190 1fc00dec62d81def914b9e5206120c90 115 SMART SM00507 15 70 2.3E-6 T 22-04-2016 IPR003615 HNH nuclease APT61_RS11190 1fc00dec62d81def914b9e5206120c90 115 Pfam PF01844 HNH endonuclease 27 75 4.3E-11 T 22-04-2016 IPR002711 HNH endonuclease GO:0003676|GO:0004519 APT61_RS18380 d5a1b7f09b67e59d58e72f13e25249a8 447 PANTHER PTHR13734:SF47 1 309 4.5E-135 T 22-04-2016 APT61_RS18380 d5a1b7f09b67e59d58e72f13e25249a8 447 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 1 442 38.737 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 APT61_RS18380 d5a1b7f09b67e59d58e72f13e25249a8 447 SUPERFAMILY SSF81301 16 171 9.81E-40 T 22-04-2016 APT61_RS18380 d5a1b7f09b67e59d58e72f13e25249a8 447 Pfam PF01743 Poly A polymerase head domain 44 175 4.6E-38 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 APT61_RS18380 d5a1b7f09b67e59d58e72f13e25249a8 447 Gene3D G3DSA:1.10.3090.10 175 409 1.4E-51 T 22-04-2016 APT61_RS18380 d5a1b7f09b67e59d58e72f13e25249a8 447 PANTHER PTHR13734 1 309 4.5E-135 T 22-04-2016 APT61_RS18380 d5a1b7f09b67e59d58e72f13e25249a8 447 Pfam PF12626 Polymerase A arginine-rich C-terminus 320 438 1.2E-40 T 22-04-2016 IPR025866 Polymerase A arginine-rich C-terminal domain APT61_RS18380 d5a1b7f09b67e59d58e72f13e25249a8 447 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 13 440 5.6E-157 T 22-04-2016 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 APT61_RS18380 d5a1b7f09b67e59d58e72f13e25249a8 447 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 202 262 4.7E-20 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain APT61_RS18380 d5a1b7f09b67e59d58e72f13e25249a8 447 Gene3D G3DSA:3.30.460.10 26 174 3.6E-50 T 22-04-2016 APT61_RS18380 d5a1b7f09b67e59d58e72f13e25249a8 447 SUPERFAMILY SSF81891 173 411 1.7E-50 T 22-04-2016 APT61_RS12610 bf5faf1adea7c1b214d34fe175fad55d 374 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.822 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 APT61_RS12610 bf5faf1adea7c1b214d34fe175fad55d 374 PANTHER PTHR30605:SF2 1 372 1.8E-267 T 22-04-2016 APT61_RS12610 bf5faf1adea7c1b214d34fe175fad55d 374 SUPERFAMILY SSF53067 143 340 3.88E-27 T 22-04-2016 APT61_RS12610 bf5faf1adea7c1b214d34fe175fad55d 374 SUPERFAMILY SSF53067 66 111 3.88E-27 T 22-04-2016 APT61_RS12610 bf5faf1adea7c1b214d34fe175fad55d 374 SUPERFAMILY SSF53067 5 36 3.88E-27 T 22-04-2016 APT61_RS12610 bf5faf1adea7c1b214d34fe175fad55d 374 PANTHER PTHR30605 1 372 1.8E-267 T 22-04-2016 APT61_RS12610 bf5faf1adea7c1b214d34fe175fad55d 374 Gene3D G3DSA:3.30.420.40 5 196 1.7E-72 T 22-04-2016 APT61_RS12610 bf5faf1adea7c1b214d34fe175fad55d 374 Pfam PF03702 Uncharacterised protein family (UPF0075) 5 367 3.8E-172 T 22-04-2016 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17|UniPathway: UPA00343|UniPathway: UPA00544 APT61_RS12105 fe712daf0d90a44cd92dfc514ece4055 171 SUPERFAMILY SSF53155 8 91 7.85E-6 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 APT61_RS12105 fe712daf0d90a44cd92dfc514ece4055 171 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 APT61_RS12105 fe712daf0d90a44cd92dfc514ece4055 171 PANTHER PTHR10815 1 167 2.0E-56 T 22-04-2016 APT61_RS12105 fe712daf0d90a44cd92dfc514ece4055 171 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 83 5.9E-13 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 APT61_RS12105 fe712daf0d90a44cd92dfc514ece4055 171 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 4 169 38.057 T 22-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 APT61_RS12105 fe712daf0d90a44cd92dfc514ece4055 171 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 3.2E-38 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APT61_RS12105 fe712daf0d90a44cd92dfc514ece4055 171 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 2.2E-35 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APT61_RS12105 fe712daf0d90a44cd92dfc514ece4055 171 PANTHER PTHR10815:SF5 1 167 2.0E-56 T 22-04-2016 APT61_RS12105 fe712daf0d90a44cd92dfc514ece4055 171 SUPERFAMILY SSF46767 86 169 1.24E-33 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APT61_RS12105 fe712daf0d90a44cd92dfc514ece4055 171 Gene3D G3DSA:1.10.10.10 86 168 5.4E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00550 1ecc61ac7f76f921bba83efd6ddb25cc 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.061 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 APT61_RS00550 1ecc61ac7f76f921bba83efd6ddb25cc 161 PANTHER PTHR33254:SF7 1 161 1.5E-109 T 22-04-2016 APT61_RS00550 1ecc61ac7f76f921bba83efd6ddb25cc 161 SUPERFAMILY SSF89562 2 158 2.75E-43 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APT61_RS00550 1ecc61ac7f76f921bba83efd6ddb25cc 161 Gene3D G3DSA:3.50.30.40 1 156 8.4E-45 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APT61_RS00550 1ecc61ac7f76f921bba83efd6ddb25cc 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 4.9E-62 T 22-04-2016 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 APT61_RS00550 1ecc61ac7f76f921bba83efd6ddb25cc 161 Pfam PF03737 Demethylmenaquinone methyltransferase 5 152 2.6E-35 T 22-04-2016 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein APT61_RS00550 1ecc61ac7f76f921bba83efd6ddb25cc 161 PANTHER PTHR33254 1 161 1.5E-109 T 22-04-2016 APT61_RS00550 1ecc61ac7f76f921bba83efd6ddb25cc 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 7.7E-91 T 22-04-2016 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 APT61_RS16765 a93ba0e0573617ac5d9c51e1a109a1f6 522 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 70 437 9.6E-65 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS16765 a93ba0e0573617ac5d9c51e1a109a1f6 522 Gene3D G3DSA:3.90.76.10 36 208 2.9E-29 T 22-04-2016 APT61_RS16765 a93ba0e0573617ac5d9c51e1a109a1f6 522 PANTHER PTHR30290 24 518 1.7E-88 T 22-04-2016 APT61_RS16765 a93ba0e0573617ac5d9c51e1a109a1f6 522 SUPERFAMILY SSF53850 21 517 2.9E-98 T 22-04-2016 APT61_RS16765 a93ba0e0573617ac5d9c51e1a109a1f6 522 Gene3D G3DSA:3.10.105.10 282 490 9.2E-36 T 22-04-2016 APT61_RS16765 a93ba0e0573617ac5d9c51e1a109a1f6 522 PIRSF PIRSF002741 11 519 8.1E-62 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APT61_RS02400 3b428d84ef3236e3968ed3e73ef8430c 646 Pfam PF00563 EAL domain 404 628 5.1E-36 T 22-04-2016 IPR001633 EAL domain APT61_RS02400 3b428d84ef3236e3968ed3e73ef8430c 646 SMART SM00267 213 385 8.0E-31 T 22-04-2016 IPR000160 GGDEF domain APT61_RS02400 3b428d84ef3236e3968ed3e73ef8430c 646 SUPERFAMILY SSF141868 403 642 2.09E-33 T 22-04-2016 IPR001633 EAL domain APT61_RS02400 3b428d84ef3236e3968ed3e73ef8430c 646 SMART SM00052 395 635 3.9E-50 T 22-04-2016 IPR001633 EAL domain APT61_RS02400 3b428d84ef3236e3968ed3e73ef8430c 646 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 380 5.0E-26 T 22-04-2016 IPR000160 GGDEF domain APT61_RS02400 3b428d84ef3236e3968ed3e73ef8430c 646 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 34 130 4.5E-22 T 22-04-2016 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 APT61_RS02400 3b428d84ef3236e3968ed3e73ef8430c 646 Gene3D G3DSA:3.20.20.450 398 638 1.7E-32 T 22-04-2016 IPR001633 EAL domain APT61_RS02400 3b428d84ef3236e3968ed3e73ef8430c 646 SUPERFAMILY SSF55073 230 387 1.02E-19 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS02400 3b428d84ef3236e3968ed3e73ef8430c 646 PANTHER PTHR33121 196 634 6.7E-20 T 22-04-2016 APT61_RS02400 3b428d84ef3236e3968ed3e73ef8430c 646 Gene3D G3DSA:3.30.70.270 227 391 6.5E-22 T 22-04-2016 APT61_RS02400 3b428d84ef3236e3968ed3e73ef8430c 646 PANTHER PTHR33121:SF16 196 634 6.7E-20 T 22-04-2016 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 4.3E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 4.3E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 4.3E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 4.3E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 4.3E-32 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 Gene3D G3DSA:1.10.730.10 642 787 1.1E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 2.0E-8 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 2.2E-28 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 SUPERFAMILY SSF50677 204 403 6.28E-52 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 1.9E-303 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 PANTHER PTHR11946 283 928 0.0 T 22-04-2016 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 PANTHER PTHR11946 6 259 0.0 T 22-04-2016 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 Gene3D G3DSA:3.90.740.10 206 389 3.5E-55 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 SUPERFAMILY SSF47323 652 929 2.43E-79 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.43 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 SUPERFAMILY SSF52374 403 648 8.88E-137 T 22-04-2016 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 SUPERFAMILY SSF52374 3 202 8.88E-137 T 22-04-2016 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 PANTHER PTHR11946:SF11 283 928 0.0 T 22-04-2016 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 PANTHER PTHR11946:SF11 6 259 0.0 T 22-04-2016 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 641 5.0E-234 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 Gene3D G3DSA:3.40.50.620 14 200 7.2E-134 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS18970 4b15c9ecafbd290dc878f27a26d44b54 938 Gene3D G3DSA:3.40.50.620 406 637 7.2E-134 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS07780 6bdfd18cdb8c069253d957829b69e920 321 Pfam PF00535 Glycosyl transferase family 2 4 157 2.0E-16 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APT61_RS07780 6bdfd18cdb8c069253d957829b69e920 321 Gene3D G3DSA:3.90.550.10 2 270 2.3E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS07780 6bdfd18cdb8c069253d957829b69e920 321 PANTHER PTHR22916 1 67 9.1E-52 T 22-04-2016 APT61_RS07780 6bdfd18cdb8c069253d957829b69e920 321 PANTHER PTHR22916 183 250 9.1E-52 T 22-04-2016 APT61_RS07780 6bdfd18cdb8c069253d957829b69e920 321 PANTHER PTHR22916 88 167 9.1E-52 T 22-04-2016 APT61_RS07780 6bdfd18cdb8c069253d957829b69e920 321 PANTHER PTHR22916:SF35 1 67 9.1E-52 T 22-04-2016 APT61_RS07780 6bdfd18cdb8c069253d957829b69e920 321 PANTHER PTHR22916:SF35 183 250 9.1E-52 T 22-04-2016 APT61_RS07780 6bdfd18cdb8c069253d957829b69e920 321 PANTHER PTHR22916:SF35 88 167 9.1E-52 T 22-04-2016 APT61_RS07780 6bdfd18cdb8c069253d957829b69e920 321 SUPERFAMILY SSF53448 1 292 1.19E-46 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS14860 b05ae66f782078488f4f14b8a8dcf27b 400 Gene3D G3DSA:3.20.140.10 6 397 1.9E-145 T 22-04-2016 APT61_RS14860 b05ae66f782078488f4f14b8a8dcf27b 400 SUPERFAMILY SSF51690 120 392 9.22E-87 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APT61_RS14860 b05ae66f782078488f4f14b8a8dcf27b 400 PIRSF PIRSF000484 1 399 9.3E-62 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APT61_RS14860 b05ae66f782078488f4f14b8a8dcf27b 400 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 394 2.5E-82 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APT61_RS14860 b05ae66f782078488f4f14b8a8dcf27b 400 PANTHER PTHR11098 1 398 1.1E-278 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APT61_RS14860 b05ae66f782078488f4f14b8a8dcf27b 400 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 394 4.7E-174 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APT61_RS14860 b05ae66f782078488f4f14b8a8dcf27b 400 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 395 50.009 T 22-04-2016 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 APT61_RS14860 b05ae66f782078488f4f14b8a8dcf27b 400 SUPERFAMILY SSF54675 3 137 1.98E-44 T 22-04-2016 APT61_RS14860 b05ae66f782078488f4f14b8a8dcf27b 400 PANTHER PTHR11098:SF14 1 398 1.1E-278 T 22-04-2016 APT61_RS00670 1c4dc8e76171c3b70a15f3351f3f53b1 383 PANTHER PTHR11014 3 381 3.3E-229 T 22-04-2016 APT61_RS00670 1c4dc8e76171c3b70a15f3351f3f53b1 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 5.2E-165 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 APT61_RS00670 1c4dc8e76171c3b70a15f3351f3f53b1 383 Gene3D G3DSA:3.40.630.10 323 381 7.4E-61 T 22-04-2016 APT61_RS00670 1c4dc8e76171c3b70a15f3351f3f53b1 383 Gene3D G3DSA:3.40.630.10 3 189 7.4E-61 T 22-04-2016 APT61_RS00670 1c4dc8e76171c3b70a15f3351f3f53b1 383 SUPERFAMILY SSF53187 305 381 4.86E-58 T 22-04-2016 APT61_RS00670 1c4dc8e76171c3b70a15f3351f3f53b1 383 SUPERFAMILY SSF53187 3 180 4.86E-58 T 22-04-2016 APT61_RS00670 1c4dc8e76171c3b70a15f3351f3f53b1 383 Pfam PF07687 Peptidase dimerisation domain 178 288 9.2E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS00670 1c4dc8e76171c3b70a15f3351f3f53b1 383 PANTHER PTHR11014:SF75 3 381 3.3E-229 T 22-04-2016 APT61_RS00670 1c4dc8e76171c3b70a15f3351f3f53b1 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APT61_RS00670 1c4dc8e76171c3b70a15f3351f3f53b1 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 66.686 T 22-04-2016 IPR010169 Acetylornithine deacetylase (ArgE) GO:0005737|GO:0006526|GO:0008270|GO:0008777|GO:0050897 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154|UniPathway: UPA00068 APT61_RS00670 1c4dc8e76171c3b70a15f3351f3f53b1 383 Pfam PF01546 Peptidase family M20/M25/M40 76 377 7.4E-32 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APT61_RS00670 1c4dc8e76171c3b70a15f3351f3f53b1 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APT61_RS00670 1c4dc8e76171c3b70a15f3351f3f53b1 383 SUPERFAMILY SSF55031 181 294 2.99E-20 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS00670 1c4dc8e76171c3b70a15f3351f3f53b1 383 Gene3D G3DSA:3.30.70.360 190 290 1.7E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 Pfam PF02743 Cache domain 54 253 1.2E-23 T 22-04-2016 IPR033479 Double Cache domain 1 APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 PANTHER PTHR32089 89 594 7.0E-173 T 22-04-2016 APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 SUPERFAMILY SSF103190 112 177 1.29E-13 T 22-04-2016 IPR029151 Periplasmic sensor domain-like APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 Gene3D G3DSA:3.30.450.20 66 168 2.7E-24 T 22-04-2016 APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 Gene3D G3DSA:1.10.287.950 361 565 7.5E-56 T 22-04-2016 APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 Pfam PF00672 HAMP domain 273 340 3.1E-14 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 SMART SM00283 346 593 2.1E-85 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 SUPERFAMILY SSF58104 313 594 4.97E-68 T 22-04-2016 APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 PANTHER PTHR32089:SF63 89 594 7.0E-173 T 22-04-2016 APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 SMART SM00304 291 345 1.4E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 396 3.6E-47 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 471 3.6E-47 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 473 502 3.6E-47 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 521 550 3.6E-47 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS09235 d747686afbfb4572835edb76a288fb64 594 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 406 592 1.7E-54 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS10700 e7cb0dde5aa6172f5301c0b9b535e00c 60 SUPERFAMILY SSF103063 1 60 8.37E-30 T 22-04-2016 IPR015051 Protein YoaG APT61_RS10700 e7cb0dde5aa6172f5301c0b9b535e00c 60 Pfam PF08956 Domain of unknown function (DUF1869) 3 60 1.2E-30 T 22-04-2016 IPR015051 Protein YoaG APT61_RS10700 e7cb0dde5aa6172f5301c0b9b535e00c 60 Gene3D G3DSA:3.30.160.220 1 60 2.4E-34 T 22-04-2016 IPR015051 Protein YoaG APT61_RS10400 97dd3cc088a120249df80208073cc4d2 172 SUPERFAMILY SSF69118 37 171 1.54E-26 T 22-04-2016 IPR029032 AhpD-like APT61_RS10400 97dd3cc088a120249df80208073cc4d2 172 PANTHER PTHR34846:SF2 13 172 1.4E-30 T 22-04-2016 APT61_RS10400 97dd3cc088a120249df80208073cc4d2 172 Pfam PF02627 Carboxymuconolactone decarboxylase family 48 104 4.3E-7 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS10400 97dd3cc088a120249df80208073cc4d2 172 PANTHER PTHR34846 13 172 1.4E-30 T 22-04-2016 APT61_RS10400 97dd3cc088a120249df80208073cc4d2 172 Gene3D G3DSA:1.20.1290.10 35 171 7.2E-34 T 22-04-2016 IPR029032 AhpD-like APT61_RS18060 3bcd6ec69dd582f312de9a5e9397f079 391 PANTHER PTHR23501 1 391 8.1E-175 T 22-04-2016 APT61_RS18060 3bcd6ec69dd582f312de9a5e9397f079 391 SUPERFAMILY SSF103473 3 381 2.35E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS18060 3bcd6ec69dd582f312de9a5e9397f079 391 Pfam PF07690 Major Facilitator Superfamily 9 234 3.5E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS18060 3bcd6ec69dd582f312de9a5e9397f079 391 Gene3D G3DSA:1.20.1250.20 5 188 5.2E-28 T 22-04-2016 APT61_RS18060 3bcd6ec69dd582f312de9a5e9397f079 391 PANTHER PTHR23501:SF4 1 391 8.1E-175 T 22-04-2016 APT61_RS18060 3bcd6ec69dd582f312de9a5e9397f079 391 Gene3D G3DSA:1.20.1250.20 190 376 1.3E-18 T 22-04-2016 APT61_RS18060 3bcd6ec69dd582f312de9a5e9397f079 391 PRINTS PR01035 Tetracycline resistance protein signature 98 119 4.2E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS18060 3bcd6ec69dd582f312de9a5e9397f079 391 PRINTS PR01035 Tetracycline resistance protein signature 10 26 4.2E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS18060 3bcd6ec69dd582f312de9a5e9397f079 391 PRINTS PR01035 Tetracycline resistance protein signature 158 178 4.2E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS18060 3bcd6ec69dd582f312de9a5e9397f079 391 PRINTS PR01035 Tetracycline resistance protein signature 40 59 4.2E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS01435 36198a02791fb0a98f321a643daca435 221 PANTHER PTHR34300:SF1 1 221 1.7E-135 T 22-04-2016 APT61_RS01435 36198a02791fb0a98f321a643daca435 221 Pfam PF02592 Putative vitamin uptake transporter 43 199 4.5E-37 T 22-04-2016 IPR003744 Protein of unknown function DUF165 APT61_RS01435 36198a02791fb0a98f321a643daca435 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 7.3E-67 T 22-04-2016 IPR003744 Protein of unknown function DUF165 APT61_RS01435 36198a02791fb0a98f321a643daca435 221 PANTHER PTHR34300 1 221 1.7E-135 T 22-04-2016 APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 PANTHER PTHR11624 1 303 0.0 T 22-04-2016 IPR033247 Transketolase family APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 PANTHER PTHR11624 333 662 0.0 T 22-04-2016 IPR033247 Transketolase family APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 PANTHER PTHR11624:SF85 1 303 0.0 T 22-04-2016 APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 PANTHER PTHR11624:SF85 333 662 0.0 T 22-04-2016 APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 Gene3D G3DSA:3.40.50.970 326 533 1.1E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 SUPERFAMILY SSF52518 333 525 2.88E-68 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 2.7E-45 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 333 4.1E-170 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 Pfam PF02780 Transketolase, C-terminal domain 543 654 9.7E-20 T 22-04-2016 IPR033248 Transketolase, C-terminal domain APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 661 0.0 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 Gene3D G3DSA:3.40.50.970 4 321 4.5E-132 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 Gene3D G3DSA:3.40.50.920 537 662 9.2E-49 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 SUPERFAMILY SSF52922 532 662 3.66E-42 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 SUPERFAMILY SSF52518 4 320 1.1E-119 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS06260 c3a41154940c643ec258cfc38e8dd7f6 662 SMART SM00861 354 524 1.3E-64 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APT61_RS21225 41a29d796ba947385866db2d4ef83f5c 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.5E-20 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 APT61_RS21225 41a29d796ba947385866db2d4ef83f5c 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APT61_RS21225 41a29d796ba947385866db2d4ef83f5c 127 Gene3D G3DSA:1.20.5.1030 64 123 3.1E-25 T 22-04-2016 APT61_RS21225 41a29d796ba947385866db2d4ef83f5c 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 APT61_RS21225 41a29d796ba947385866db2d4ef83f5c 127 PANTHER PTHR33910:SF1 1 126 5.6E-36 T 22-04-2016 APT61_RS21225 41a29d796ba947385866db2d4ef83f5c 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.0E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APT61_RS21225 41a29d796ba947385866db2d4ef83f5c 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.0E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APT61_RS21225 41a29d796ba947385866db2d4ef83f5c 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.0E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APT61_RS21225 41a29d796ba947385866db2d4ef83f5c 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.0E-41 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 APT61_RS21225 41a29d796ba947385866db2d4ef83f5c 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 22-04-2016 IPR022943 Preprotein translocase subunit SecE APT61_RS21225 41a29d796ba947385866db2d4ef83f5c 127 PANTHER PTHR33910 1 126 5.6E-36 T 22-04-2016 APT61_RS01080 24d2ec9db2e150edc5bd41201efd0b83 546 PANTHER PTHR10566:SF79 1 543 0.0 T 22-04-2016 APT61_RS01080 24d2ec9db2e150edc5bd41201efd0b83 546 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 3.9E-186 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 APT61_RS01080 24d2ec9db2e150edc5bd41201efd0b83 546 Pfam PF03109 ABC1 family 117 232 3.5E-34 T 22-04-2016 IPR004147 UbiB domain APT61_RS01080 24d2ec9db2e150edc5bd41201efd0b83 546 Gene3D G3DSA:3.30.200.20 127 157 6.1E-4 T 22-04-2016 APT61_RS01080 24d2ec9db2e150edc5bd41201efd0b83 546 Gene3D G3DSA:3.30.200.20 193 226 6.1E-4 T 22-04-2016 APT61_RS01080 24d2ec9db2e150edc5bd41201efd0b83 546 Gene3D G3DSA:3.90.1200.10 251 297 8.3E-4 T 22-04-2016 APT61_RS01080 24d2ec9db2e150edc5bd41201efd0b83 546 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 542 56.64 T 22-04-2016 IPR010232 Probable protein kinase UbiB GO:0006744 UniPathway: UPA00232 APT61_RS01080 24d2ec9db2e150edc5bd41201efd0b83 546 PANTHER PTHR10566 1 543 0.0 T 22-04-2016 APT61_RS01080 24d2ec9db2e150edc5bd41201efd0b83 546 SUPERFAMILY SSF56112 94 159 2.38E-49 T 22-04-2016 IPR011009 Protein kinase-like domain APT61_RS01080 24d2ec9db2e150edc5bd41201efd0b83 546 SUPERFAMILY SSF56112 194 438 2.38E-49 T 22-04-2016 IPR011009 Protein kinase-like domain APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 SUPERFAMILY SSF55307 203 319 8.01E-43 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 PANTHER PTHR30314:SF3 1 381 1.1E-206 T 22-04-2016 APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 SMART SM00865 206 324 3.9E-56 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 Gene3D G3DSA:3.40.50.1440 13 213 3.1E-93 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 335 3.8E-142 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 PANTHER PTHR30314 1 381 1.1E-206 T 22-04-2016 APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 SUPERFAMILY SSF52490 12 207 2.62E-69 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 Gene3D G3DSA:3.30.1330.20 214 321 3.7E-47 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 SMART SM00864 12 204 1.9E-110 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 383 38.151 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 5.5E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 5.5E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 5.5E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 5.5E-52 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 1.0E-41 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 APT61_RS18585 f69ab5c2cb3f31c03b55971619b24ea5 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 2.1E-37 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal APT61_RS02675 f0f1c48fd84836df46681a6da9c50339 270 PANTHER PTHR24220:SF368 10 266 3.2E-193 T 22-04-2016 APT61_RS02675 f0f1c48fd84836df46681a6da9c50339 270 Gene3D G3DSA:3.40.50.300 7 239 9.1E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02675 f0f1c48fd84836df46681a6da9c50339 270 SUPERFAMILY SSF52540 8 237 2.27E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02675 f0f1c48fd84836df46681a6da9c50339 270 Pfam PF00005 ABC transporter 25 172 1.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS02675 f0f1c48fd84836df46681a6da9c50339 270 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS02675 f0f1c48fd84836df46681a6da9c50339 270 PANTHER PTHR24220 10 266 3.2E-193 T 22-04-2016 APT61_RS02675 f0f1c48fd84836df46681a6da9c50339 270 SMART SM00382 33 229 6.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 SUPERFAMILY SSF51735 310 489 9.18E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 311 489 8.5E-59 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 PANTHER PTHR23309 7 712 0.0 T 22-04-2016 APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 489 513 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 706 52.312 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 706 0.0 T 22-04-2016 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 Gene3D G3DSA:1.10.1040.10 494 587 7.5E-29 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 Gene3D G3DSA:3.40.50.720 308 493 8.2E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 SUPERFAMILY SSF48179 492 595 4.0E-28 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 Gene3D G3DSA:1.10.1040.10 623 703 3.0E-22 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 SUPERFAMILY SSF48179 618 706 2.89E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 PANTHER PTHR23309:SF6 7 712 0.0 T 22-04-2016 APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 Gene3D G3DSA:3.90.226.10 3 204 9.5E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 492 586 1.7E-27 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 202 1.1E-43 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APT61_RS06610 ab532f0a4b55ea6d39d28e604b774398 715 SUPERFAMILY SSF52096 7 299 3.37E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS21925 55b3cfa607d5cd218c8821f303c81976 334 Gene3D G3DSA:3.40.50.1820 31 332 8.8E-82 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS21925 55b3cfa607d5cd218c8821f303c81976 334 Pfam PF00561 alpha/beta hydrolase fold 68 170 4.1E-19 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS21925 55b3cfa607d5cd218c8821f303c81976 334 PRINTS PR00111 Alpha/beta hydrolase fold signature 138 151 3.8E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS21925 55b3cfa607d5cd218c8821f303c81976 334 PRINTS PR00111 Alpha/beta hydrolase fold signature 152 165 3.8E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS21925 55b3cfa607d5cd218c8821f303c81976 334 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 108 3.8E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS21925 55b3cfa607d5cd218c8821f303c81976 334 PANTHER PTHR10992:SF771 29 279 1.8E-80 T 22-04-2016 APT61_RS21925 55b3cfa607d5cd218c8821f303c81976 334 PANTHER PTHR10992:SF771 296 333 1.8E-80 T 22-04-2016 APT61_RS21925 55b3cfa607d5cd218c8821f303c81976 334 PANTHER PTHR10992 29 279 1.8E-80 T 22-04-2016 APT61_RS21925 55b3cfa607d5cd218c8821f303c81976 334 PANTHER PTHR10992 296 333 1.8E-80 T 22-04-2016 APT61_RS21925 55b3cfa607d5cd218c8821f303c81976 334 PRINTS PR00412 Epoxide hydrolase signature 138 151 2.1E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS21925 55b3cfa607d5cd218c8821f303c81976 334 PRINTS PR00412 Epoxide hydrolase signature 308 330 2.1E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS21925 55b3cfa607d5cd218c8821f303c81976 334 PRINTS PR00412 Epoxide hydrolase signature 152 165 2.1E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS21925 55b3cfa607d5cd218c8821f303c81976 334 PRINTS PR00412 Epoxide hydrolase signature 93 108 2.1E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS21925 55b3cfa607d5cd218c8821f303c81976 334 SUPERFAMILY SSF53474 39 331 2.75E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS08950 1263214f5da5c13bcf0304ce712d76a2 84 PANTHER PTHR33884:SF2 1 83 6.2E-51 T 22-04-2016 APT61_RS08950 1263214f5da5c13bcf0304ce712d76a2 84 Pfam PF04226 Transglycosylase associated protein 34 83 8.6E-16 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 APT61_RS08950 1263214f5da5c13bcf0304ce712d76a2 84 PANTHER PTHR33884 1 83 6.2E-51 T 22-04-2016 APT61_RS04615 3795e7ed000681bbf608b0f51bbf7c58 432 PANTHER PTHR11061 1 430 1.9E-129 T 22-04-2016 APT61_RS04615 3795e7ed000681bbf608b0f51bbf7c58 432 Gene3D G3DSA:3.40.50.150 251 430 6.2E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS04615 3795e7ed000681bbf608b0f51bbf7c58 432 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 424 1.9E-155 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 APT61_RS04615 3795e7ed000681bbf608b0f51bbf7c58 432 Pfam PF01938 TRAM domain 11 66 1.4E-12 T 22-04-2016 IPR002792 TRAM domain APT61_RS04615 3795e7ed000681bbf608b0f51bbf7c58 432 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 363 393 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site APT61_RS04615 3795e7ed000681bbf608b0f51bbf7c58 432 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 112 430 2.7E-25 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APT61_RS04615 3795e7ed000681bbf608b0f51bbf7c58 432 Gene3D G3DSA:2.40.50.140 2 87 1.1E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS04615 3795e7ed000681bbf608b0f51bbf7c58 432 PANTHER PTHR11061:SF30 1 430 1.9E-129 T 22-04-2016 APT61_RS04615 3795e7ed000681bbf608b0f51bbf7c58 432 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 432 64.756 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 APT61_RS04615 3795e7ed000681bbf608b0f51bbf7c58 432 SUPERFAMILY SSF50249 2 66 3.83E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS04615 3795e7ed000681bbf608b0f51bbf7c58 432 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 414 424 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site APT61_RS04615 3795e7ed000681bbf608b0f51bbf7c58 432 SUPERFAMILY SSF53335 76 430 4.07E-88 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS14470 3b8dcc13106c82610388e0fbc835ee08 129 SUPERFAMILY SSF55331 2 122 1.13E-34 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily APT61_RS14470 3b8dcc13106c82610388e0fbc835ee08 129 Pfam PF14552 Tautomerase enzyme 38 119 8.2E-27 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 APT61_RS14470 3b8dcc13106c82610388e0fbc835ee08 129 PANTHER PTHR38460:SF1 2 123 3.4E-23 T 22-04-2016 APT61_RS14470 3b8dcc13106c82610388e0fbc835ee08 129 Gene3D G3DSA:3.30.429.10 3 123 1.6E-30 T 22-04-2016 APT61_RS14470 3b8dcc13106c82610388e0fbc835ee08 129 PANTHER PTHR38460 2 123 3.4E-23 T 22-04-2016 APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 Pfam PF03461 TRCF domain 1006 1097 6.1E-29 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 SMART SM00982 1005 1105 1.4E-49 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 SUPERFAMILY SSF52540 351 463 7.08E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 SUPERFAMILY SSF52540 12 340 2.47E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 SUPERFAMILY SSF52540 520 780 2.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 PANTHER PTHR14025 383 1139 0.0 T 22-04-2016 APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1104 28.687 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 SMART SM00487 597 787 2.1E-33 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 SMART SM00490 823 907 3.0E-19 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 Gene3D G3DSA:3.40.50.300 584 783 7.5E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 9.7E-24 T 22-04-2016 IPR003711 CarD-like/TRCF domain APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 PANTHER PTHR14025:SF21 383 1139 0.0 T 22-04-2016 APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 5.5E-20 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 SUPERFAMILY SSF52540 779 987 9.47E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 SMART SM01058 476 573 2.5E-49 T 22-04-2016 IPR003711 CarD-like/TRCF domain APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 Pfam PF00271 Helicase conserved C-terminal domain 803 906 2.0E-18 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 SUPERFAMILY SSF141259 467 545 5.75E-23 T 22-04-2016 IPR003711 CarD-like/TRCF domain APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 Gene3D G3DSA:3.30.2060.10 130 207 4.7E-13 T 22-04-2016 APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 Gene3D G3DSA:3.40.50.300 793 960 5.6E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13880 8341334b837780ee739fa0244d730d71 1148 SUPERFAMILY SSF143517 992 1144 2.09E-45 T 22-04-2016 APT61_RS09160 bae661c9fb3b5f9527d67237d8f3c698 347 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS09160 bae661c9fb3b5f9527d67237d8f3c698 347 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 6.7E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS09160 bae661c9fb3b5f9527d67237d8f3c698 347 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 6.7E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS09160 bae661c9fb3b5f9527d67237d8f3c698 347 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 6.7E-11 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS09160 bae661c9fb3b5f9527d67237d8f3c698 347 Gene3D G3DSA:1.10.1660.10 58 110 1.8E-6 T 22-04-2016 APT61_RS09160 bae661c9fb3b5f9527d67237d8f3c698 347 PANTHER PTHR30204:SF6 1 276 4.6E-33 T 22-04-2016 APT61_RS09160 bae661c9fb3b5f9527d67237d8f3c698 347 SMART SM00422 3 72 6.7E-26 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS09160 bae661c9fb3b5f9527d67237d8f3c698 347 SUPERFAMILY SSF46955 5 106 1.36E-26 T 22-04-2016 IPR009061 Putative DNA-binding domain APT61_RS09160 bae661c9fb3b5f9527d67237d8f3c698 347 PANTHER PTHR30204 1 276 4.6E-33 T 22-04-2016 APT61_RS09160 bae661c9fb3b5f9527d67237d8f3c698 347 Gene3D G3DSA:1.10.1660.10 2 57 8.2E-24 T 22-04-2016 APT61_RS09160 bae661c9fb3b5f9527d67237d8f3c698 347 Pfam PF13411 MerR HTH family regulatory protein 5 70 6.4E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 Gene3D G3DSA:1.10.8.50 130 269 5.3E-52 T 22-04-2016 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 SMART SM01232 129 221 1.8E-50 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 PANTHER PTHR22993:SF15 1 269 3.4E-141 T 22-04-2016 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 SUPERFAMILY SSF81624 2 138 6.02E-44 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 44.214 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 1.1E-107 T 22-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 Gene3D G3DSA:3.20.190.10 2 129 2.0E-38 T 22-04-2016 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 2.0E-32 T 22-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 5.2E-32 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 SMART SM00898 2 115 2.1E-54 T 22-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 22-04-2016 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 SUPERFAMILY SSF57716 217 269 1.31E-16 T 22-04-2016 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 PANTHER PTHR22993 1 269 3.4E-141 T 22-04-2016 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 SUPERFAMILY SSF46946 130 222 5.89E-31 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APT61_RS21670 fe1a855f60e93869b34770a644c2cf1f 269 Pfam PF06827 Zinc finger found in FPG and IleRS 242 269 1.3E-8 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type APT61_RS12670 a754eaf9a3de1d2ffff0e135809b28fb 365 PANTHER PTHR22893 1 365 7.1E-171 T 22-04-2016 APT61_RS12670 a754eaf9a3de1d2ffff0e135809b28fb 365 SUPERFAMILY SSF51395 3 363 4.58E-125 T 22-04-2016 APT61_RS12670 a754eaf9a3de1d2ffff0e135809b28fb 365 Gene3D G3DSA:3.20.20.70 4 364 1.2E-135 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS12670 a754eaf9a3de1d2ffff0e135809b28fb 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 9.9E-90 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 APT61_RS03770 25bf6e88db4e5f6bb42dae45a4618f3b 162 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 162 91.863 T 22-04-2016 IPR020765 Uncharacterised protein family UPF0114, gammaproteobacteria GO:0005886 APT61_RS03770 25bf6e88db4e5f6bb42dae45a4618f3b 162 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 8.7E-36 T 22-04-2016 IPR005134 Uncharacterised protein family UPF0114 APT61_RS03770 25bf6e88db4e5f6bb42dae45a4618f3b 162 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 161 3.1E-76 T 22-04-2016 IPR020761 Uncharacterised protein family UPF0114, bacteria APT61_RS03770 25bf6e88db4e5f6bb42dae45a4618f3b 162 PANTHER PTHR38596 1 162 1.5E-97 T 22-04-2016 APT61_RS03770 25bf6e88db4e5f6bb42dae45a4618f3b 162 PANTHER PTHR38596:SF1 1 162 1.5E-97 T 22-04-2016 APT61_RS02830 678a76a4ab4e9b5fd121dc3fdf8a928f 89 Gene3D G3DSA:1.10.287.10 3 89 3.1E-39 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APT61_RS02830 678a76a4ab4e9b5fd121dc3fdf8a928f 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 5.0E-39 T 22-04-2016 APT61_RS02830 678a76a4ab4e9b5fd121dc3fdf8a928f 89 PANTHER PTHR23321 1 89 1.2E-48 T 22-04-2016 APT61_RS02830 678a76a4ab4e9b5fd121dc3fdf8a928f 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.368 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APT61_RS02830 678a76a4ab4e9b5fd121dc3fdf8a928f 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02830 678a76a4ab4e9b5fd121dc3fdf8a928f 89 SUPERFAMILY SSF47060 3 89 3.24E-35 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 APT61_RS02830 678a76a4ab4e9b5fd121dc3fdf8a928f 89 SMART SM01387 8 88 7.7E-53 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02830 678a76a4ab4e9b5fd121dc3fdf8a928f 89 Pfam PF00312 Ribosomal protein S15 8 88 7.2E-38 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02830 678a76a4ab4e9b5fd121dc3fdf8a928f 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 6 89 3.0E-40 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 APT61_RS21930 a8448e99be8129a59129e94b1ba04006 337 SUPERFAMILY SSF74650 40 333 1.73E-7 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APT61_RS21930 a8448e99be8129a59129e94b1ba04006 337 Pfam PF14486 Domain of unknown function (DUF4432) 34 335 3.1E-16 T 22-04-2016 IPR027839 Protein of unknown function DUF4432 APT61_RS00035 5d347b78c75ff30ecda78950dafc77b7 330 Gene3D G3DSA:3.30.930.10 2 327 1.1E-153 T 22-04-2016 APT61_RS00035 5d347b78c75ff30ecda78950dafc77b7 330 PANTHER PTHR30073:SF5 1 330 7.5E-199 T 22-04-2016 APT61_RS00035 5d347b78c75ff30ecda78950dafc77b7 330 SUPERFAMILY SSF55681 6 326 3.65E-97 T 22-04-2016 APT61_RS00035 5d347b78c75ff30ecda78950dafc77b7 330 PIRSF PIRSF001555 1 330 1.4E-151 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APT61_RS00035 5d347b78c75ff30ecda78950dafc77b7 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 3.9E-94 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APT61_RS00035 5d347b78c75ff30ecda78950dafc77b7 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 2.1E-189 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APT61_RS00035 5d347b78c75ff30ecda78950dafc77b7 330 PANTHER PTHR30073 1 330 7.5E-199 T 22-04-2016 APT61_RS00035 5d347b78c75ff30ecda78950dafc77b7 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 45.614 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 APT61_RS18330 2f915fab37fc23a2679163178ed3a161 660 SUPERFAMILY SSF81345 345 657 8.11E-72 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS18330 2f915fab37fc23a2679163178ed3a161 660 Gene3D G3DSA:1.10.3470.10 3 327 3.3E-72 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS18330 2f915fab37fc23a2679163178ed3a161 660 SUPERFAMILY SSF81345 5 325 5.75E-59 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS18330 2f915fab37fc23a2679163178ed3a161 660 Pfam PF01032 FecCD transport family 26 323 3.9E-63 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS18330 2f915fab37fc23a2679163178ed3a161 660 Pfam PF01032 FecCD transport family 361 657 2.6E-74 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS18330 2f915fab37fc23a2679163178ed3a161 660 PANTHER PTHR30472:SF16 244 660 4.9E-205 T 22-04-2016 APT61_RS18330 2f915fab37fc23a2679163178ed3a161 660 PANTHER PTHR30472 244 660 4.9E-205 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS18330 2f915fab37fc23a2679163178ed3a161 660 Gene3D G3DSA:1.10.3470.10 342 659 1.1E-82 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS16075 e7cfaebb4d5aa164ea50d641762aeb48 878 Gene3D G3DSA:3.20.110.10 6 273 3.7E-45 T 22-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain APT61_RS16075 e7cfaebb4d5aa164ea50d641762aeb48 878 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 386 828 3.3E-28 T 22-04-2016 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0006013|GO:0015923 APT61_RS16075 e7cfaebb4d5aa164ea50d641762aeb48 878 SUPERFAMILY SSF74650 375 876 3.08E-72 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APT61_RS16075 e7cfaebb4d5aa164ea50d641762aeb48 878 PANTHER PTHR11607 6 705 0.0 T 22-04-2016 APT61_RS16075 e7cfaebb4d5aa164ea50d641762aeb48 878 PANTHER PTHR11607:SF34 6 705 0.0 T 22-04-2016 APT61_RS16075 e7cfaebb4d5aa164ea50d641762aeb48 878 SUPERFAMILY SSF88713 6 272 4.3E-51 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APT61_RS16075 e7cfaebb4d5aa164ea50d641762aeb48 878 SUPERFAMILY SSF88688 286 375 3.33E-7 T 22-04-2016 IPR028995 Glycoside hydrolase families 57/38, central domain APT61_RS16075 e7cfaebb4d5aa164ea50d641762aeb48 878 Gene3D G3DSA:1.20.1270.50 286 377 3.5E-5 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 APT61_RS16075 e7cfaebb4d5aa164ea50d641762aeb48 878 SMART SM00872 279 357 2.7E-17 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 APT61_RS16075 e7cfaebb4d5aa164ea50d641762aeb48 878 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 7 268 2.6E-38 T 22-04-2016 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0005975 APT61_RS16075 e7cfaebb4d5aa164ea50d641762aeb48 878 Pfam PF09261 Alpha mannosidase middle domain 280 355 2.4E-7 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 APT61_RS04435 c63024d7aba9e60c9284a85dc6b5d38a 154 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 3.5E-6 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS04435 c63024d7aba9e60c9284a85dc6b5d38a 154 SUPERFAMILY SSF54523 7 95 3.06E-9 T 22-04-2016 APT61_RS04435 c63024d7aba9e60c9284a85dc6b5d38a 154 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 23 1.5E-4 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 2.1E-265 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 PANTHER PTHR11938:SF93 23 472 0.0 T 22-04-2016 APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 Gene3D G3DSA:3.40.50.720 401 471 5.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 Gene3D G3DSA:3.40.50.720 150 236 5.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 PANTHER PTHR11938 23 472 0.0 T 22-04-2016 APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 SUPERFAMILY SSF46548 7 157 4.5E-41 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 7.3E-38 T 22-04-2016 APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 7.3E-38 T 22-04-2016 APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 7.3E-38 T 22-04-2016 APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 7.3E-38 T 22-04-2016 APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 7.3E-38 T 22-04-2016 APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 Gene3D G3DSA:3.50.50.60 237 400 8.6E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 5.8E-38 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 SUPERFAMILY SSF51971 145 401 5.47E-68 T 22-04-2016 APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 2.9E-25 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS02540 6184644dbcee1c1fa2c937069e400350 472 Gene3D G3DSA:1.10.1060.10 5 149 5.0E-47 T 22-04-2016 APT61_RS00825 10c1b5309945954b444a4706307110cd 673 Gene3D G3DSA:3.40.50.300 182 279 1.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00825 10c1b5309945954b444a4706307110cd 673 Gene3D G3DSA:3.40.50.300 2 104 1.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00825 10c1b5309945954b444a4706307110cd 673 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 41.286 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 APT61_RS00825 10c1b5309945954b444a4706307110cd 673 SUPERFAMILY SSF52540 2 636 5.14E-163 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00825 10c1b5309945954b444a4706307110cd 673 PANTHER PTHR11070:SF19 1 668 0.0 T 22-04-2016 APT61_RS00825 10c1b5309945954b444a4706307110cd 673 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 1.7E-74 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APT61_RS00825 10c1b5309945954b444a4706307110cd 673 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 667 0.0 T 22-04-2016 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 APT61_RS00825 10c1b5309945954b444a4706307110cd 673 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 1.6E-72 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APT61_RS00825 10c1b5309945954b444a4706307110cd 673 Gene3D G3DSA:1.10.10.160 108 181 1.9E-24 T 22-04-2016 IPR013986 DExx box DNA helicase domain APT61_RS00825 10c1b5309945954b444a4706307110cd 673 Gene3D G3DSA:1.10.486.10 383 523 2.7E-40 T 22-04-2016 APT61_RS00825 10c1b5309945954b444a4706307110cd 673 Gene3D G3DSA:3.40.50.300 550 638 9.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00825 10c1b5309945954b444a4706307110cd 673 Gene3D G3DSA:3.40.50.300 280 382 9.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00825 10c1b5309945954b444a4706307110cd 673 PANTHER PTHR11070 1 668 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APT61_RS13990 59b5686251b3879cf4f4799fd22e932f 309 SUPERFAMILY SSF55048 128 197 1.83E-17 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 APT61_RS13990 59b5686251b3879cf4f4799fd22e932f 309 PIRSF PIRSF000446 1 309 3.2E-141 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 APT61_RS13990 59b5686251b3879cf4f4799fd22e932f 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 3.7E-131 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 APT61_RS13990 59b5686251b3879cf4f4799fd22e932f 309 SUPERFAMILY SSF52151 190 307 4.19E-81 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APT61_RS13990 59b5686251b3879cf4f4799fd22e932f 309 SUPERFAMILY SSF52151 4 122 4.19E-81 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APT61_RS13990 59b5686251b3879cf4f4799fd22e932f 309 Gene3D G3DSA:3.30.70.250 125 196 1.0E-31 T 22-04-2016 APT61_RS13990 59b5686251b3879cf4f4799fd22e932f 309 Gene3D G3DSA:3.40.366.10 197 299 1.1E-71 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APT61_RS13990 59b5686251b3879cf4f4799fd22e932f 309 Gene3D G3DSA:3.40.366.10 3 122 1.1E-71 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APT61_RS13990 59b5686251b3879cf4f4799fd22e932f 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 309 1.1E-38 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain APT61_RS13990 59b5686251b3879cf4f4799fd22e932f 309 Pfam PF00698 Acyl transferase domain 6 281 2.6E-39 T 22-04-2016 IPR014043 Acyl transferase APT61_RS13990 59b5686251b3879cf4f4799fd22e932f 309 PANTHER PTHR10982 1 308 6.1E-162 T 22-04-2016 APT61_RS14520 c063e622db208740143b779d63135a80 460 Pfam PF01321 Creatinase/Prolidase N-terminal domain 33 140 2.3E-4 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 APT61_RS14520 c063e622db208740143b779d63135a80 460 Pfam PF00557 Metallopeptidase family M24 203 396 5.1E-10 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS14520 c063e622db208740143b779d63135a80 460 SUPERFAMILY SSF53092 25 102 1.92E-5 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal APT61_RS14520 c063e622db208740143b779d63135a80 460 Gene3D G3DSA:3.90.230.10 195 400 5.6E-12 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS14520 c063e622db208740143b779d63135a80 460 Gene3D G3DSA:3.40.350.10 31 99 9.1E-5 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APT61_RS14520 c063e622db208740143b779d63135a80 460 SUPERFAMILY SSF55920 195 399 1.28E-19 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 SMART SM00138 24 284 3.8E-126 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 SUPERFAMILY SSF53335 92 281 6.59E-59 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 SUPERFAMILY SSF47757 14 91 2.22E-24 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 Gene3D G3DSA:1.10.155.10 14 90 1.8E-33 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 PRINTS PR00996 Glutamate methyltransferase family signature 85 97 6.5E-47 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 PRINTS PR00996 Glutamate methyltransferase family signature 46 59 6.5E-47 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 PRINTS PR00996 Glutamate methyltransferase family signature 152 168 6.5E-47 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 PRINTS PR00996 Glutamate methyltransferase family signature 243 266 6.5E-47 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 PRINTS PR00996 Glutamate methyltransferase family signature 224 238 6.5E-47 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 6.5E-47 T 22-04-2016 IPR000780 MCP methyltransferase, CheR-type GO:0008757 APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 PANTHER PTHR24422 14 287 1.1E-158 T 22-04-2016 APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 PANTHER PTHR24422:SF13 14 287 1.1E-158 T 22-04-2016 APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 Gene3D G3DSA:3.40.50.150 91 281 1.2E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 Pfam PF01739 CheR methyltransferase, SAM binding domain 92 280 2.9E-60 T 22-04-2016 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 Pfam PF03705 CheR methyltransferase, all-alpha domain 26 77 1.3E-17 T 22-04-2016 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal APT61_RS08465 ccdd50d1dd7838a67df25bcc07aa63a2 288 PIRSF PIRSF000410 9 285 1.6E-100 T 22-04-2016 IPR026024 Chemotaxis protein methyltransferase CheR APT61_RS14565 2eee7ca76dc6a673e73d6c872af28fb0 221 PANTHER PTHR13887 1 216 9.7E-42 T 22-04-2016 APT61_RS14565 2eee7ca76dc6a673e73d6c872af28fb0 221 PANTHER PTHR13887:SF10 1 216 9.7E-42 T 22-04-2016 APT61_RS14565 2eee7ca76dc6a673e73d6c872af28fb0 221 Pfam PF01323 DSBA-like thioredoxin domain 5 204 1.1E-29 T 22-04-2016 IPR001853 DSBA-like thioredoxin domain GO:0015035 APT61_RS14565 2eee7ca76dc6a673e73d6c872af28fb0 221 SUPERFAMILY SSF52833 1 210 3.11E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS14565 2eee7ca76dc6a673e73d6c872af28fb0 221 Gene3D G3DSA:3.40.30.10 1 203 2.0E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS17875 544690ad7742a4edac485e8b4c311e0b 300 PRINTS PR00412 Epoxide hydrolase signature 272 294 1.4E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS17875 544690ad7742a4edac485e8b4c311e0b 300 PRINTS PR00412 Epoxide hydrolase signature 46 64 1.4E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS17875 544690ad7742a4edac485e8b4c311e0b 300 PRINTS PR00412 Epoxide hydrolase signature 112 125 1.4E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS17875 544690ad7742a4edac485e8b4c311e0b 300 PRINTS PR00412 Epoxide hydrolase signature 126 139 1.4E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS17875 544690ad7742a4edac485e8b4c311e0b 300 Pfam PF00561 alpha/beta hydrolase fold 40 182 6.1E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS17875 544690ad7742a4edac485e8b4c311e0b 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 126 139 8.1E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS17875 544690ad7742a4edac485e8b4c311e0b 300 PRINTS PR00111 Alpha/beta hydrolase fold signature 65 80 8.1E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS17875 544690ad7742a4edac485e8b4c311e0b 300 PANTHER PTHR10992 17 182 3.3E-121 T 22-04-2016 APT61_RS17875 544690ad7742a4edac485e8b4c311e0b 300 PANTHER PTHR10992 198 297 3.3E-121 T 22-04-2016 APT61_RS17875 544690ad7742a4edac485e8b4c311e0b 300 Gene3D G3DSA:3.40.50.1820 10 298 1.3E-62 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS17875 544690ad7742a4edac485e8b4c311e0b 300 PANTHER PTHR10992:SF26 17 182 3.3E-121 T 22-04-2016 APT61_RS17875 544690ad7742a4edac485e8b4c311e0b 300 PANTHER PTHR10992:SF26 198 297 3.3E-121 T 22-04-2016 APT61_RS17875 544690ad7742a4edac485e8b4c311e0b 300 SUPERFAMILY SSF53474 16 297 4.67E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS03020 0ca35a274aeb8a434a3018403ae14a63 130 Pfam PF07681 DoxX 9 87 3.4E-17 T 22-04-2016 IPR032808 DoxX family APT61_RS03020 0ca35a274aeb8a434a3018403ae14a63 130 PANTHER PTHR33452 1 130 5.1E-94 T 22-04-2016 APT61_RS03020 0ca35a274aeb8a434a3018403ae14a63 130 PANTHER PTHR33452:SF8 1 130 5.1E-94 T 22-04-2016 APT61_RS06585 14684c66785f28af767062aa3eb3792d 313 PANTHER PTHR30520 23 310 1.1E-191 T 22-04-2016 APT61_RS06585 14684c66785f28af767062aa3eb3792d 313 Gene3D G3DSA:1.20.1080.10 57 284 6.1E-46 T 22-04-2016 IPR023271 Aquaporin-like APT61_RS06585 14684c66785f28af767062aa3eb3792d 313 Pfam PF01226 Formate/nitrite transporter 43 279 4.8E-40 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APT61_RS06585 14684c66785f28af767062aa3eb3792d 313 PANTHER PTHR30520:SF2 23 310 1.1E-191 T 22-04-2016 APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 PANTHER PTHR23309 362 470 1.4E-221 T 22-04-2016 APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 PANTHER PTHR23309 1 301 1.4E-221 T 22-04-2016 APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 390 464 2.6E-14 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 283 4.8E-30 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 Gene3D G3DSA:3.40.50.2300 314 376 9.0E-5 T 22-04-2016 APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 182 1.9E-64 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 SUPERFAMILY SSF48179 385 465 3.4E-17 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 Gene3D G3DSA:3.40.50.720 1 187 1.5E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 TIGRFAM TIGR02279 PaaC-3OHAcCoADH: 3-hydroxyacyl-CoA dehydrogenase PaaC 4 472 7.3E-230 T 22-04-2016 IPR011967 3-hydroxyacyl-CoA dehydrogenase PaaC GO:0008691|GO:0010124 KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.-|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00981+1.1.1.-|UniPathway: UPA00930 APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 SUPERFAMILY SSF51735 1 185 3.73E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 208 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 SUPERFAMILY SSF48179 185 296 4.59E-29 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 PANTHER PTHR23309:SF12 362 470 1.4E-221 T 22-04-2016 APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 PANTHER PTHR23309:SF12 1 301 1.4E-221 T 22-04-2016 APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 Gene3D G3DSA:1.10.1040.10 385 465 2.2E-20 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS10060 7893157bf302a44c7a7db29df4652dc9 473 Gene3D G3DSA:1.10.1040.10 188 283 1.0E-29 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS21600 789659816b1373f17111f863b31e2ce9 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APT61_RS21600 789659816b1373f17111f863b31e2ce9 398 Gene3D G3DSA:3.90.1150.10 279 393 2.3E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS21600 789659816b1373f17111f863b31e2ce9 398 SUPERFAMILY SSF53383 5 396 1.63E-123 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS21600 789659816b1373f17111f863b31e2ce9 398 Pfam PF00155 Aminotransferase class I and II 43 387 1.1E-76 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS21600 789659816b1373f17111f863b31e2ce9 398 PANTHER PTHR13693:SF60 1 397 2.6E-262 T 22-04-2016 APT61_RS21600 789659816b1373f17111f863b31e2ce9 398 Gene3D G3DSA:3.40.640.10 61 278 7.7E-88 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS21600 789659816b1373f17111f863b31e2ce9 398 PANTHER PTHR13693 1 397 2.6E-262 T 22-04-2016 APT61_RS21600 789659816b1373f17111f863b31e2ce9 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.829 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 APT61_RS21600 789659816b1373f17111f863b31e2ce9 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 9.0E-222 T 22-04-2016 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|UniPathway: UPA00046 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 1.5E-128 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 1.5E-128 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 PRINTS PR01005 Flagellar hook-associated protein signature 467 488 1.5E-128 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 PRINTS PR01005 Flagellar hook-associated protein signature 410 427 1.5E-128 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 PRINTS PR01005 Flagellar hook-associated protein signature 362 384 1.5E-128 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 1.5E-128 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 1.5E-128 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 1.5E-128 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 PRINTS PR01005 Flagellar hook-associated protein signature 514 538 1.5E-128 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 PRINTS PR01005 Flagellar hook-associated protein signature 442 461 1.5E-128 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 1.5E-128 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 396 6.9E-79 T 22-04-2016 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 Pfam PF00460 Flagella basal body rod protein 5 35 1.2E-5 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 PANTHER PTHR30033 1 548 1.0E-121 T 22-04-2016 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 SUPERFAMILY SSF64518 102 546 5.1E-49 T 22-04-2016 APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 492 547 3.1E-8 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APT61_RS14045 e054b652ec08bb5f576c0a89aab2f819 548 PANTHER PTHR30033:SF1 1 548 1.0E-121 T 22-04-2016 APT61_RS06865 3d057e6c2412e72b6e41f4ef519f1d17 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 163 26.804 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 APT61_RS06865 3d057e6c2412e72b6e41f4ef519f1d17 180 SUPERFAMILY SSF54862 33 153 1.17E-28 T 22-04-2016 APT61_RS06865 3d057e6c2412e72b6e41f4ef519f1d17 180 PANTHER PTHR10849:SF13 8 180 1.1E-82 T 22-04-2016 APT61_RS06865 3d057e6c2412e72b6e41f4ef519f1d17 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 9.7E-51 T 22-04-2016 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 APT61_RS06865 3d057e6c2412e72b6e41f4ef519f1d17 180 Gene3D G3DSA:3.30.70.20 27 117 4.4E-18 T 22-04-2016 APT61_RS06865 3d057e6c2412e72b6e41f4ef519f1d17 180 PANTHER PTHR10849 8 180 1.1E-82 T 22-04-2016 APT61_RS06865 3d057e6c2412e72b6e41f4ef519f1d17 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 3.7E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS06865 3d057e6c2412e72b6e41f4ef519f1d17 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS06865 3d057e6c2412e72b6e41f4ef519f1d17 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS04135 a0607e5482acd06d8b00003145a6f508 364 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 43.973 T 22-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APT61_RS04135 a0607e5482acd06d8b00003145a6f508 364 PANTHER PTHR13847 5 357 1.3E-60 T 22-04-2016 APT61_RS04135 a0607e5482acd06d8b00003145a6f508 364 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 358 1.2E-160 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APT61_RS04135 a0607e5482acd06d8b00003145a6f508 364 Gene3D G3DSA:3.30.1360.120 3 53 9.6E-52 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APT61_RS04135 a0607e5482acd06d8b00003145a6f508 364 Gene3D G3DSA:3.30.1360.120 144 231 9.6E-52 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APT61_RS04135 a0607e5482acd06d8b00003145a6f508 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 2.3E-82 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal APT61_RS04135 a0607e5482acd06d8b00003145a6f508 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 353 1.9E-18 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APT61_RS04135 a0607e5482acd06d8b00003145a6f508 364 PANTHER PTHR13847:SF5 5 357 1.3E-60 T 22-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APT61_RS04135 a0607e5482acd06d8b00003145a6f508 364 Gene3D G3DSA:3.30.70.1400 54 137 2.7E-32 T 22-04-2016 APT61_RS04135 a0607e5482acd06d8b00003145a6f508 364 PIRSF PIRSF006487 1 362 4.0E-77 T 22-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APT61_RS04135 a0607e5482acd06d8b00003145a6f508 364 SUPERFAMILY SSF101790 269 360 1.37E-25 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain APT61_RS04135 a0607e5482acd06d8b00003145a6f508 364 Gene3D G3DSA:2.40.30.110 278 361 3.5E-28 T 22-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 APT61_RS04135 a0607e5482acd06d8b00003145a6f508 364 SUPERFAMILY SSF103025 3 277 1.73E-90 T 22-04-2016 APT61_RS07870 50e705c6bade9f6674fff7f4f78ca296 309 SUPERFAMILY SSF53850 89 292 3.53E-24 T 22-04-2016 APT61_RS07870 50e705c6bade9f6674fff7f4f78ca296 309 Pfam PF03466 LysR substrate binding domain 89 290 2.9E-21 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS07870 50e705c6bade9f6674fff7f4f78ca296 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 3.1E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS07870 50e705c6bade9f6674fff7f4f78ca296 309 PANTHER PTHR30126:SF4 2 307 9.0E-182 T 22-04-2016 APT61_RS07870 50e705c6bade9f6674fff7f4f78ca296 309 PANTHER PTHR30126 2 307 9.0E-182 T 22-04-2016 APT61_RS07870 50e705c6bade9f6674fff7f4f78ca296 309 SUPERFAMILY SSF46785 5 89 9.52E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS07870 50e705c6bade9f6674fff7f4f78ca296 309 Gene3D G3DSA:1.10.10.10 6 83 9.5E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS07870 50e705c6bade9f6674fff7f4f78ca296 309 Gene3D G3DSA:3.40.190.10 178 257 2.1E-7 T 22-04-2016 APT61_RS07870 50e705c6bade9f6674fff7f4f78ca296 309 Gene3D G3DSA:3.40.190.10 84 177 4.4E-9 T 22-04-2016 APT61_RS06010 373a02aaece78ce1bef3a416928152a8 332 SMART SM00530 18 79 1.9E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS06010 373a02aaece78ce1bef3a416928152a8 332 Gene3D G3DSA:1.10.260.40 7 84 6.2E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS06010 373a02aaece78ce1bef3a416928152a8 332 Pfam PF13413 Helix-turn-helix domain 18 78 3.4E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS06010 373a02aaece78ce1bef3a416928152a8 332 SUPERFAMILY SSF47413 15 81 9.12E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS06010 373a02aaece78ce1bef3a416928152a8 332 Pfam PF13464 Domain of unknown function (DUF4115) 250 324 1.0E-23 T 22-04-2016 IPR025194 Domain of unknown function DUF4115 APT61_RS06010 373a02aaece78ce1bef3a416928152a8 332 PANTHER PTHR34475 2 332 3.0E-56 T 22-04-2016 APT61_RS06010 373a02aaece78ce1bef3a416928152a8 332 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 327 44.514 T 22-04-2016 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 APT61_RS06010 373a02aaece78ce1bef3a416928152a8 332 PANTHER PTHR34475:SF1 2 332 3.0E-56 T 22-04-2016 APT61_RS01525 d5927bd3f13464f66070fd6677d829b7 369 SUPERFAMILY SSF53822 24 363 4.71E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS01525 d5927bd3f13464f66070fd6677d829b7 369 Pfam PF13458 Periplasmic binding protein 26 348 4.2E-59 T 22-04-2016 IPR028081 Leucine-binding protein domain APT61_RS01525 d5927bd3f13464f66070fd6677d829b7 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 4.3E-65 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01525 d5927bd3f13464f66070fd6677d829b7 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 4.3E-65 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01525 d5927bd3f13464f66070fd6677d829b7 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 4.3E-65 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01525 d5927bd3f13464f66070fd6677d829b7 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 4.3E-65 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01525 d5927bd3f13464f66070fd6677d829b7 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 4.3E-65 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01525 d5927bd3f13464f66070fd6677d829b7 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 4.3E-65 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01525 d5927bd3f13464f66070fd6677d829b7 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 329 344 4.3E-65 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01525 d5927bd3f13464f66070fd6677d829b7 369 PANTHER PTHR30483 1 359 6.8E-286 T 22-04-2016 APT61_RS01525 d5927bd3f13464f66070fd6677d829b7 369 PANTHER PTHR30483:SF16 1 359 6.8E-286 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01525 d5927bd3f13464f66070fd6677d829b7 369 Gene3D G3DSA:3.40.50.2300 24 224 4.8E-65 T 22-04-2016 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 SUPERFAMILY SSF82714 719 801 4.58E-17 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 Gene3D G3DSA:3.30.70.1430 49 151 2.3E-29 T 22-04-2016 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 SUPERFAMILY SSF82866 299 498 2.35E-44 T 22-04-2016 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 SUPERFAMILY SSF82866 801 1028 8.11E-47 T 22-04-2016 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 SUPERFAMILY SSF82693 49 138 5.23E-23 T 22-04-2016 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 33.61 T 22-04-2016 IPR022831 Multidrug resistance protein MdtB APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 SUPERFAMILY SSF82693 146 191 3.4E-21 T 22-04-2016 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 SUPERFAMILY SSF82693 277 333 3.4E-21 T 22-04-2016 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 PANTHER PTHR32063:SF21 10 1039 0.0 T 22-04-2016 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 Gene3D G3DSA:3.30.70.1430 568 655 4.5E-11 T 22-04-2016 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 4.6E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 4.6E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 4.6E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 4.6E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 4.6E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 4.6E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 4.6E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 4.6E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 4.6E-80 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 SUPERFAMILY SSF82714 192 275 1.07E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 Gene3D G3DSA:3.30.2090.10 719 801 7.8E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 Gene3D G3DSA:3.30.2090.10 192 275 6.0E-18 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 Gene3D G3DSA:1.20.1640.10 294 509 2.5E-54 T 22-04-2016 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 PANTHER PTHR32063 10 1039 0.0 T 22-04-2016 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 Gene3D G3DSA:1.10.3850.10 808 1024 1.9E-57 T 22-04-2016 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 SUPERFAMILY SSF82693 565 660 4.88E-16 T 22-04-2016 APT61_RS07610 e085e719a8d72c3a55e9c2194d69412d 1041 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS21725 2d0001ac39f47abf3f99a522d4eded1b 550 PANTHER PTHR30443 1 541 2.2E-67 T 22-04-2016 APT61_RS21725 2d0001ac39f47abf3f99a522d4eded1b 550 Pfam PF00884 Sulfatase 228 461 3.4E-28 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APT61_RS21725 2d0001ac39f47abf3f99a522d4eded1b 550 SUPERFAMILY SSF53649 229 495 3.27E-16 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APT61_RS21725 2d0001ac39f47abf3f99a522d4eded1b 550 Gene3D G3DSA:3.40.720.10 228 459 1.9E-9 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APT61_RS20930 1b1a77235bc30dc3a0256fba53e68ed6 171 SUPERFAMILY SSF46785 12 144 5.75E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20930 1b1a77235bc30dc3a0256fba53e68ed6 171 Gene3D G3DSA:1.10.10.10 12 83 3.1E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20930 1b1a77235bc30dc3a0256fba53e68ed6 171 PANTHER PTHR33202 1 171 1.5E-96 T 22-04-2016 APT61_RS20930 1b1a77235bc30dc3a0256fba53e68ed6 171 Pfam PF01475 Ferric uptake regulator family 20 138 4.4E-15 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 APT61_RS20930 1b1a77235bc30dc3a0256fba53e68ed6 171 PANTHER PTHR33202:SF6 1 171 1.5E-96 T 22-04-2016 APT61_RS09400 5f7129242a0934e18ef8cb8d3133c9ff 543 PANTHER PTHR30290:SF10 9 542 8.0E-210 T 22-04-2016 APT61_RS09400 5f7129242a0934e18ef8cb8d3133c9ff 543 SUPERFAMILY SSF53850 35 525 3.52E-146 T 22-04-2016 APT61_RS09400 5f7129242a0934e18ef8cb8d3133c9ff 543 Gene3D G3DSA:3.10.105.10 310 511 5.8E-63 T 22-04-2016 APT61_RS09400 5f7129242a0934e18ef8cb8d3133c9ff 543 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 463 1.9E-87 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS09400 5f7129242a0934e18ef8cb8d3133c9ff 543 PIRSF PIRSF002741 1 542 5.3E-114 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APT61_RS09400 5f7129242a0934e18ef8cb8d3133c9ff 543 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site APT61_RS09400 5f7129242a0934e18ef8cb8d3133c9ff 543 PANTHER PTHR30290 9 542 8.0E-210 T 22-04-2016 APT61_RS09400 5f7129242a0934e18ef8cb8d3133c9ff 543 Gene3D G3DSA:3.40.190.10 160 309 5.6E-56 T 22-04-2016 APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Pfam PF12245 Bacterial Ig-like domain (group 3) 1345 1361 0.14 T 22-04-2016 IPR022038 Bacterial Ig-like domain APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Pfam PF12245 Bacterial Ig-like domain (group 3) 3458 3481 4.3 T 22-04-2016 IPR022038 Bacterial Ig-like domain APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Pfam PF12245 Bacterial Ig-like domain (group 3) 4461 4487 1.4 T 22-04-2016 IPR022038 Bacterial Ig-like domain APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Pfam PF12245 Bacterial Ig-like domain (group 3) 3872 3905 0.44 T 22-04-2016 IPR022038 Bacterial Ig-like domain APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Pfam PF12245 Bacterial Ig-like domain (group 3) 1143 1163 4.3 T 22-04-2016 IPR022038 Bacterial Ig-like domain APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Pfam PF12245 Bacterial Ig-like domain (group 3) 4192 4213 4.8 T 22-04-2016 IPR022038 Bacterial Ig-like domain APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Pfam PF12245 Bacterial Ig-like domain (group 3) 2357 2383 2.9 T 22-04-2016 IPR022038 Bacterial Ig-like domain APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Pfam PF12245 Bacterial Ig-like domain (group 3) 3170 3197 0.1 T 22-04-2016 IPR022038 Bacterial Ig-like domain APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Pfam PF12245 Bacterial Ig-like domain (group 3) 3662 3692 1.2 T 22-04-2016 IPR022038 Bacterial Ig-like domain APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 5306 5386 1.4E-17 T 22-04-2016 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 5202 5262 1.6E-4 T 22-04-2016 IPR010221 VCBS repeat APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 4692 4732 0.0032 T 22-04-2016 IPR010221 VCBS repeat APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Gene3D G3DSA:2.60.40.1560 1994 2063 4.5E-4 T 22-04-2016 APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Gene3D G3DSA:2.60.40.1560 3828 3899 5.2E-5 T 22-04-2016 APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Gene3D G3DSA:2.60.40.1560 2199 2267 2.1E-4 T 22-04-2016 APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Gene3D G3DSA:2.60.40.1560 3114 3196 1.7E-4 T 22-04-2016 APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Gene3D G3DSA:2.60.40.1560 1179 1252 6.4E-5 T 22-04-2016 APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Gene3D G3DSA:2.60.40.1560 2598 2669 8.6E-4 T 22-04-2016 APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Gene3D G3DSA:2.60.40.1560 1283 1360 5.5E-5 T 22-04-2016 APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Gene3D G3DSA:2.60.40.1560 4033 4102 6.5E-4 T 22-04-2016 APT61_RS05425 47570de866ed36625fdfdcaa394451c7 5388 Gene3D G3DSA:2.60.40.1560 767 840 5.5E-4 T 22-04-2016 APT61_RS08820 ca8d2717543eb09d05968533f5a61b61 454 SUPERFAMILY SSF143548 16 158 8.11E-46 T 22-04-2016 IPR029009 Allosteric substrate binding domain APT61_RS08820 ca8d2717543eb09d05968533f5a61b61 454 PANTHER PTHR30182 2 454 0.0 T 22-04-2016 APT61_RS08820 ca8d2717543eb09d05968533f5a61b61 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 2.9E-96 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit APT61_RS08820 ca8d2717543eb09d05968533f5a61b61 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 3.5E-228 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APT61_RS08820 ca8d2717543eb09d05968533f5a61b61 454 Gene3D G3DSA:3.30.1330.90 10 158 1.9E-54 T 22-04-2016 IPR029009 Allosteric substrate binding domain APT61_RS08820 ca8d2717543eb09d05968533f5a61b61 454 Pfam PF03315 Serine dehydratase beta chain 3 155 3.9E-56 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APT61_RS08820 ca8d2717543eb09d05968533f5a61b61 454 PANTHER PTHR30182:SF4 2 454 0.0 T 22-04-2016 APT61_RS00715 57b314565a468a65d70238c270de4b19 617 PANTHER PTHR30069:SF10 1 600 2.9E-260 T 22-04-2016 APT61_RS00715 57b314565a468a65d70238c270de4b19 617 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 145 4.3E-29 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS00715 57b314565a468a65d70238c270de4b19 617 SUPERFAMILY SSF56935 25 617 6.31E-125 T 22-04-2016 APT61_RS00715 57b314565a468a65d70238c270de4b19 617 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 1 617 34.172 T 22-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 APT61_RS00715 57b314565a468a65d70238c270de4b19 617 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 2 617 2.2E-224 T 22-04-2016 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 APT61_RS00715 57b314565a468a65d70238c270de4b19 617 Gene3D G3DSA:2.40.170.20 149 617 6.0E-95 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS00715 57b314565a468a65d70238c270de4b19 617 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 600 617 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site APT61_RS00715 57b314565a468a65d70238c270de4b19 617 PANTHER PTHR30069 1 600 2.9E-260 T 22-04-2016 APT61_RS00715 57b314565a468a65d70238c270de4b19 617 Pfam PF00593 TonB dependent receptor 390 616 3.0E-35 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS00715 57b314565a468a65d70238c270de4b19 617 Gene3D G3DSA:2.170.130.10 28 148 1.3E-39 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS11180 637acf39b72e837eeaf537ff02757f47 569 PANTHER PTHR19211 18 538 1.3E-115 T 22-04-2016 APT61_RS11180 637acf39b72e837eeaf537ff02757f47 569 Gene3D G3DSA:3.40.50.300 10 228 2.0E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11180 637acf39b72e837eeaf537ff02757f47 569 Gene3D G3DSA:3.40.50.300 317 505 1.4E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11180 637acf39b72e837eeaf537ff02757f47 569 Pfam PF00005 ABC transporter 317 443 8.6E-15 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS11180 637acf39b72e837eeaf537ff02757f47 569 Pfam PF00005 ABC transporter 21 154 3.3E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS11180 637acf39b72e837eeaf537ff02757f47 569 ProSitePatterns PS00211 ABC transporters family signature. 415 429 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS11180 637acf39b72e837eeaf537ff02757f47 569 SMART SM00382 322 488 1.5E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS11180 637acf39b72e837eeaf537ff02757f47 569 SMART SM00382 29 302 1.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS11180 637acf39b72e837eeaf537ff02757f47 569 SUPERFAMILY SSF52540 317 502 7.66E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11180 637acf39b72e837eeaf537ff02757f47 569 SUPERFAMILY SSF52540 18 203 1.27E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04550 7eebaad832ce2631ebefc40c24ae6a22 429 PANTHER PTHR35334:SF2 1 429 0.0 T 22-04-2016 APT61_RS04550 7eebaad832ce2631ebefc40c24ae6a22 429 TIGRFAM TIGR00814 stp: serine transporter 18 418 6.7E-184 T 22-04-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 APT61_RS04550 7eebaad832ce2631ebefc40c24ae6a22 429 PANTHER PTHR35334 1 429 0.0 T 22-04-2016 APT61_RS04970 a0004d055f75b35e753501e91a1eef66 92 SUPERFAMILY SSF159127 1 85 1.28E-26 T 22-04-2016 APT61_RS04970 a0004d055f75b35e753501e91a1eef66 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 7.8E-20 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APT61_RS04970 a0004d055f75b35e753501e91a1eef66 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 7.8E-20 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APT61_RS04970 a0004d055f75b35e753501e91a1eef66 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 7.8E-20 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APT61_RS04970 a0004d055f75b35e753501e91a1eef66 92 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 7.8E-20 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APT61_RS04970 a0004d055f75b35e753501e91a1eef66 92 PANTHER PTHR35177:SF1 2 90 9.3E-47 T 22-04-2016 APT61_RS04970 a0004d055f75b35e753501e91a1eef66 92 Pfam PF01455 HupF/HypC family 1 72 6.4E-24 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APT61_RS04970 a0004d055f75b35e753501e91a1eef66 92 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 22-04-2016 IPR019812 Hydrogenase assembly chaperone, conserved site APT61_RS04970 a0004d055f75b35e753501e91a1eef66 92 PANTHER PTHR35177 2 90 9.3E-47 T 22-04-2016 APT61_RS04970 a0004d055f75b35e753501e91a1eef66 92 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 82 5.0E-28 T 22-04-2016 IPR001109 Hydrogenase expression/formation protein, HupF/HypC APT61_RS05765 8be26109f5122fee1031e8966ee82aab 191 SUPERFAMILY SSF88659 122 183 9.53E-19 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS05765 8be26109f5122fee1031e8966ee82aab 191 Pfam PF08281 Sigma-70, region 4 129 180 4.4E-19 T 22-04-2016 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS05765 8be26109f5122fee1031e8966ee82aab 191 SUPERFAMILY SSF88946 2 104 6.28E-31 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS05765 8be26109f5122fee1031e8966ee82aab 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 1.4E-30 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS05765 8be26109f5122fee1031e8966ee82aab 191 Pfam PF04542 Sigma-70 region 2 25 91 3.8E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS05765 8be26109f5122fee1031e8966ee82aab 191 PANTHER PTHR30173 1 186 8.2E-55 T 22-04-2016 APT61_RS05765 8be26109f5122fee1031e8966ee82aab 191 PANTHER PTHR30173:SF1 1 186 8.2E-55 T 22-04-2016 APT61_RS05765 8be26109f5122fee1031e8966ee82aab 191 Gene3D G3DSA:1.10.1740.10 2 107 7.0E-37 T 22-04-2016 APT61_RS05765 8be26109f5122fee1031e8966ee82aab 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 22-04-2016 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS05765 8be26109f5122fee1031e8966ee82aab 191 Gene3D G3DSA:1.10.10.10 122 187 5.2E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05765 8be26109f5122fee1031e8966ee82aab 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 4.9E-99 T 22-04-2016 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS12710 1afa6f3f75153df764300d761ffc7f10 310 Pfam PF03466 LysR substrate binding domain 88 290 3.7E-27 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS12710 1afa6f3f75153df764300d761ffc7f10 310 SUPERFAMILY SSF53850 88 290 4.71E-28 T 22-04-2016 APT61_RS12710 1afa6f3f75153df764300d761ffc7f10 310 PANTHER PTHR30126:SF18 1 306 1.2E-176 T 22-04-2016 APT61_RS12710 1afa6f3f75153df764300d761ffc7f10 310 PANTHER PTHR30126 1 306 1.2E-176 T 22-04-2016 APT61_RS12710 1afa6f3f75153df764300d761ffc7f10 310 Gene3D G3DSA:3.40.190.10 174 257 8.3E-6 T 22-04-2016 APT61_RS12710 1afa6f3f75153df764300d761ffc7f10 310 SUPERFAMILY SSF46785 6 88 1.24E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS12710 1afa6f3f75153df764300d761ffc7f10 310 Gene3D G3DSA:3.40.190.10 89 173 8.5E-10 T 22-04-2016 APT61_RS12710 1afa6f3f75153df764300d761ffc7f10 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 8.8E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS12710 1afa6f3f75153df764300d761ffc7f10 310 Gene3D G3DSA:1.10.10.10 6 88 2.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19775 0b45afb5c92c9ef721ad946c08df12f8 227 SUPERFAMILY SSF46785 13 74 1.32E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19775 0b45afb5c92c9ef721ad946c08df12f8 227 SMART SM00345 12 70 1.0E-17 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS19775 0b45afb5c92c9ef721ad946c08df12f8 227 Gene3D G3DSA:1.10.10.10 13 72 1.5E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19775 0b45afb5c92c9ef721ad946c08df12f8 227 Gene3D G3DSA:1.20.120.530 73 211 1.6E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS19775 0b45afb5c92c9ef721ad946c08df12f8 227 SMART SM00895 80 212 4.2E-19 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS19775 0b45afb5c92c9ef721ad946c08df12f8 227 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 70 5.8E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS19775 0b45afb5c92c9ef721ad946c08df12f8 227 Pfam PF07729 FCD domain 80 210 2.5E-23 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS19775 0b45afb5c92c9ef721ad946c08df12f8 227 PANTHER PTHR11751 13 96 5.6E-19 T 22-04-2016 APT61_RS19775 0b45afb5c92c9ef721ad946c08df12f8 227 SUPERFAMILY SSF48008 76 219 1.33E-21 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS08235 a87355b9e8d4c805e7f46454d0d2ce7f 122 Pfam PF07883 Cupin domain 51 107 2.7E-9 T 22-04-2016 IPR013096 Cupin 2, conserved barrel APT61_RS08235 a87355b9e8d4c805e7f46454d0d2ce7f 122 SUPERFAMILY SSF51182 18 110 2.02E-18 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS08235 a87355b9e8d4c805e7f46454d0d2ce7f 122 Gene3D G3DSA:2.60.120.10 18 109 1.4E-37 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS01845 4cd1d1383a8ab6bbff209c9c5e1ed033 269 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 250 2.5E-82 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APT61_RS01845 4cd1d1383a8ab6bbff209c9c5e1ed033 269 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site APT61_RS01845 4cd1d1383a8ab6bbff209c9c5e1ed033 269 Pfam PF01226 Formate/nitrite transporter 19 247 5.4E-57 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APT61_RS01845 4cd1d1383a8ab6bbff209c9c5e1ed033 269 Gene3D G3DSA:1.20.1080.10 23 250 1.9E-60 T 22-04-2016 IPR023271 Aquaporin-like APT61_RS01845 4cd1d1383a8ab6bbff209c9c5e1ed033 269 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site APT61_RS01845 4cd1d1383a8ab6bbff209c9c5e1ed033 269 PANTHER PTHR30520:SF5 3 265 4.6E-129 T 22-04-2016 APT61_RS01845 4cd1d1383a8ab6bbff209c9c5e1ed033 269 PANTHER PTHR30520 3 265 4.6E-129 T 22-04-2016 APT61_RS00650 ccaf79390095075d7cbd99ff7eeb8c67 292 Pfam PF13353 4Fe-4S single cluster domain 34 147 3.1E-11 T 22-04-2016 APT61_RS00650 ccaf79390095075d7cbd99ff7eeb8c67 292 Gene3D G3DSA:3.30.70.20 47 93 3.4E-4 T 22-04-2016 APT61_RS00650 ccaf79390095075d7cbd99ff7eeb8c67 292 ProSitePatterns PS01087 Radical activating enzymes signature. 35 56 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APT61_RS00650 ccaf79390095075d7cbd99ff7eeb8c67 292 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 76 284 2.2E-53 T 22-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 APT61_RS00650 ccaf79390095075d7cbd99ff7eeb8c67 292 SUPERFAMILY SSF102114 99 286 4.71E-13 T 22-04-2016 APT61_RS00650 ccaf79390095075d7cbd99ff7eeb8c67 292 SUPERFAMILY SSF102114 35 67 4.71E-13 T 22-04-2016 APT61_RS00650 ccaf79390095075d7cbd99ff7eeb8c67 292 Gene3D G3DSA:3.80.30.10 116 291 3.1E-48 T 22-04-2016 APT61_RS00650 ccaf79390095075d7cbd99ff7eeb8c67 292 PANTHER PTHR30352:SF10 94 292 1.9E-185 T 22-04-2016 APT61_RS00650 ccaf79390095075d7cbd99ff7eeb8c67 292 PANTHER PTHR30352:SF10 8 76 1.9E-185 T 22-04-2016 APT61_RS00650 ccaf79390095075d7cbd99ff7eeb8c67 292 Pfam PF04055 Radical SAM superfamily 41 222 6.0E-20 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS00650 ccaf79390095075d7cbd99ff7eeb8c67 292 PANTHER PTHR30352 94 292 1.9E-185 T 22-04-2016 APT61_RS00650 ccaf79390095075d7cbd99ff7eeb8c67 292 PANTHER PTHR30352 8 76 1.9E-185 T 22-04-2016 APT61_RS02040 22549bcb6568d6f8192c319610a1cc58 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 2.1E-15 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APT61_RS02040 22549bcb6568d6f8192c319610a1cc58 64 PANTHER PTHR37424:SF1 2 64 2.7E-22 T 22-04-2016 APT61_RS02040 22549bcb6568d6f8192c319610a1cc58 64 PANTHER PTHR37424 2 64 2.7E-22 T 22-04-2016 APT61_RS15450 4b71527939a7607a670a1958013e07f7 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 82 5.7E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APT61_RS15450 4b71527939a7607a670a1958013e07f7 208 Pfam PF13410 Glutathione S-transferase, C-terminal domain 128 191 3.6E-10 T 22-04-2016 APT61_RS15450 4b71527939a7607a670a1958013e07f7 208 SUPERFAMILY SSF47616 82 203 6.96E-27 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS15450 4b71527939a7607a670a1958013e07f7 208 PANTHER PTHR11260:SF157 1 206 4.1E-78 T 22-04-2016 APT61_RS15450 4b71527939a7607a670a1958013e07f7 208 SUPERFAMILY SSF52833 1 85 2.11E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS15450 4b71527939a7607a670a1958013e07f7 208 Gene3D G3DSA:1.20.1050.10 89 202 5.4E-27 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS15450 4b71527939a7607a670a1958013e07f7 208 PANTHER PTHR11260 1 206 4.1E-78 T 22-04-2016 APT61_RS15450 4b71527939a7607a670a1958013e07f7 208 Gene3D G3DSA:3.40.30.10 1 81 2.0E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS21890 315a101a0fd7a850cf0c31c6dc0a9594 441 PIRSF PIRSF006351 5 436 7.3E-136 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 APT61_RS21890 315a101a0fd7a850cf0c31c6dc0a9594 441 Pfam PF02378 Phosphotransferase system, EIIC 33 352 9.3E-51 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS21890 315a101a0fd7a850cf0c31c6dc0a9594 441 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 17 426 7.9E-109 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 APT61_RS21890 315a101a0fd7a850cf0c31c6dc0a9594 441 PANTHER PTHR33989:SF4 3 432 3.1E-141 T 22-04-2016 APT61_RS21890 315a101a0fd7a850cf0c31c6dc0a9594 441 PANTHER PTHR33989 3 432 3.1E-141 T 22-04-2016 APT61_RS13810 9c34219c14478bcae1952b5e68c8f011 223 SMART SM00448 1 112 1.1E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS13810 9c34219c14478bcae1952b5e68c8f011 223 PANTHER PTHR26402:SF537 1 223 2.0E-162 T 22-04-2016 APT61_RS13810 9c34219c14478bcae1952b5e68c8f011 223 Gene3D G3DSA:1.10.10.10 134 221 3.1E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS13810 9c34219c14478bcae1952b5e68c8f011 223 PANTHER PTHR26402 1 223 2.0E-162 T 22-04-2016 APT61_RS13810 9c34219c14478bcae1952b5e68c8f011 223 SMART SM00862 145 220 7.9E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS13810 9c34219c14478bcae1952b5e68c8f011 223 SUPERFAMILY SSF52172 1 173 9.25E-38 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS13810 9c34219c14478bcae1952b5e68c8f011 223 Pfam PF00072 Response regulator receiver domain 3 112 4.6E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS13810 9c34219c14478bcae1952b5e68c8f011 223 Gene3D G3DSA:3.40.50.2300 1 133 1.3E-36 T 22-04-2016 APT61_RS13810 9c34219c14478bcae1952b5e68c8f011 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 7.8E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS00895 a26db7e8d26b53455d953a0ca02a2f1b 246 PANTHER PTHR34136:SF1 2 240 5.5E-95 T 22-04-2016 APT61_RS00895 a26db7e8d26b53455d953a0ca02a2f1b 246 PANTHER PTHR34136 2 240 5.5E-95 T 22-04-2016 APT61_RS00895 a26db7e8d26b53455d953a0ca02a2f1b 246 Gene3D G3DSA:3.40.30.10 26 122 3.5E-4 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS00895 a26db7e8d26b53455d953a0ca02a2f1b 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 66 231 1.2E-51 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 APT61_RS00895 a26db7e8d26b53455d953a0ca02a2f1b 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 61.266 T 22-04-2016 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 APT61_RS00895 a26db7e8d26b53455d953a0ca02a2f1b 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 60 237 9.2E-75 T 22-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 APT61_RS08095 0db888182a6bf82a2a24dcc5b6e4c17a 235 Pfam PF02108 Flagellar assembly protein FliH 103 226 6.6E-40 T 22-04-2016 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE APT61_RS08095 0db888182a6bf82a2a24dcc5b6e4c17a 235 PANTHER PTHR34982 3 229 5.4E-68 T 22-04-2016 APT61_RS08095 0db888182a6bf82a2a24dcc5b6e4c17a 235 PANTHER PTHR34982:SF1 3 229 5.4E-68 T 22-04-2016 APT61_RS08095 0db888182a6bf82a2a24dcc5b6e4c17a 235 PRINTS PR01003 Flagellar assembly protein FliH signature 83 101 3.6E-111 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APT61_RS08095 0db888182a6bf82a2a24dcc5b6e4c17a 235 PRINTS PR01003 Flagellar assembly protein FliH signature 60 82 3.6E-111 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APT61_RS08095 0db888182a6bf82a2a24dcc5b6e4c17a 235 PRINTS PR01003 Flagellar assembly protein FliH signature 102 121 3.6E-111 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APT61_RS08095 0db888182a6bf82a2a24dcc5b6e4c17a 235 PRINTS PR01003 Flagellar assembly protein FliH signature 122 139 3.6E-111 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APT61_RS08095 0db888182a6bf82a2a24dcc5b6e4c17a 235 PRINTS PR01003 Flagellar assembly protein FliH signature 191 207 3.6E-111 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APT61_RS08095 0db888182a6bf82a2a24dcc5b6e4c17a 235 PRINTS PR01003 Flagellar assembly protein FliH signature 5 24 3.6E-111 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APT61_RS08095 0db888182a6bf82a2a24dcc5b6e4c17a 235 PRINTS PR01003 Flagellar assembly protein FliH signature 163 190 3.6E-111 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APT61_RS08095 0db888182a6bf82a2a24dcc5b6e4c17a 235 PRINTS PR01003 Flagellar assembly protein FliH signature 208 233 3.6E-111 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APT61_RS08095 0db888182a6bf82a2a24dcc5b6e4c17a 235 PRINTS PR01003 Flagellar assembly protein FliH signature 140 162 3.6E-111 T 22-04-2016 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 APT61_RS18825 83b9e7edd92e53ed73eeff8aab0e331e 255 PANTHER PTHR30353 1 254 1.7E-180 T 22-04-2016 IPR032818 DedA family APT61_RS18825 83b9e7edd92e53ed73eeff8aab0e331e 255 PANTHER PTHR30353:SF7 1 254 1.7E-180 T 22-04-2016 APT61_RS18825 83b9e7edd92e53ed73eeff8aab0e331e 255 Pfam PF09335 SNARE associated Golgi protein 36 159 7.5E-19 T 22-04-2016 IPR032816 SNARE associated Golgi protein APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 Gene3D G3DSA:1.10.287.130 654 722 9.1E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 PANTHER PTHR24423 593 883 1.4E-132 T 22-04-2016 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 PANTHER PTHR24423 22 197 1.4E-132 T 22-04-2016 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 Gene3D G3DSA:3.40.50.620 245 350 8.0E-9 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 SUPERFAMILY SSF52402 253 365 9.21E-8 T 22-04-2016 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 SMART SM00387 770 880 1.4E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 Pfam PF00512 His Kinase A (phospho-acceptor) domain 660 726 3.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 Gene3D G3DSA:1.20.120.620 397 502 3.2E-40 T 22-04-2016 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 Pfam PF13493 Domain of unknown function (DUF4118) 403 507 2.4E-29 T 22-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 PANTHER PTHR24423:SF562 593 883 1.4E-132 T 22-04-2016 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 PANTHER PTHR24423:SF562 22 197 1.4E-132 T 22-04-2016 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 SMART SM00388 659 726 2.6E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 Gene3D G3DSA:3.30.565.10 728 882 2.4E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 230 5.2E-97 T 22-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 840 858 3.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 864 877 3.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 807 821 3.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 PRINTS PR00344 Bacterial sensor protein C-terminal signature 825 835 3.5E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 SUPERFAMILY SSF47384 651 727 3.14E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 773 879 1.7E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 SUPERFAMILY SSF55874 715 883 6.94E-41 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS16205 8b6c74c0bc7d429ba50d014d2e132fa1 891 Gene3D G3DSA:3.40.50.300 21 229 2.6E-100 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16680 0ce4ed9e8062405c47e4bee8c81a5300 214 PRINTS PR01399 Enterobactin synthetase component D signature 144 160 1.4E-10 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 APT61_RS16680 0ce4ed9e8062405c47e4bee8c81a5300 214 PRINTS PR01399 Enterobactin synthetase component D signature 44 64 1.4E-10 T 22-04-2016 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 UniPathway: UPA00017 APT61_RS16680 0ce4ed9e8062405c47e4bee8c81a5300 214 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 102 185 1.0E-10 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS16680 0ce4ed9e8062405c47e4bee8c81a5300 214 PANTHER PTHR38096 1 211 9.9E-50 T 22-04-2016 APT61_RS16680 0ce4ed9e8062405c47e4bee8c81a5300 214 SUPERFAMILY SSF56214 102 186 1.05E-11 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS00240 d856735a3200abdd04d99fa8bbf02174 293 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 274 1.3E-102 T 22-04-2016 IPR017039 Virulence factor BrkB APT61_RS00240 d856735a3200abdd04d99fa8bbf02174 293 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 13 281 23.55 T 22-04-2016 IPR023679 Uncharacterised protein family UPF0761, bacterial APT61_RS00240 d856735a3200abdd04d99fa8bbf02174 293 PANTHER PTHR30213 14 289 1.9E-106 T 22-04-2016 APT61_RS00240 d856735a3200abdd04d99fa8bbf02174 293 Pfam PF03631 Virulence factor BrkB 29 272 5.8E-56 T 22-04-2016 IPR017039 Virulence factor BrkB APT61_RS00240 d856735a3200abdd04d99fa8bbf02174 293 PIRSF PIRSF035875 1 293 3.1E-71 T 22-04-2016 IPR017039 Virulence factor BrkB APT61_RS00240 d856735a3200abdd04d99fa8bbf02174 293 PANTHER PTHR30213:SF0 14 289 1.9E-106 T 22-04-2016 APT61_RS07785 04efb00bdb3ea73457df03b6626d0b50 257 SUPERFAMILY SSF53448 10 249 1.96E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS07785 04efb00bdb3ea73457df03b6626d0b50 257 PANTHER PTHR22916:SF16 8 147 1.5E-28 T 22-04-2016 APT61_RS07785 04efb00bdb3ea73457df03b6626d0b50 257 PANTHER PTHR22916:SF16 165 249 1.5E-28 T 22-04-2016 APT61_RS07785 04efb00bdb3ea73457df03b6626d0b50 257 PANTHER PTHR22916 8 147 1.5E-28 T 22-04-2016 APT61_RS07785 04efb00bdb3ea73457df03b6626d0b50 257 PANTHER PTHR22916 165 249 1.5E-28 T 22-04-2016 APT61_RS07785 04efb00bdb3ea73457df03b6626d0b50 257 Gene3D G3DSA:3.90.550.10 50 255 2.8E-19 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 Gene3D G3DSA:2.10.109.10 264 310 7.6E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 Gene3D G3DSA:2.10.109.10 76 154 7.6E-57 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 Pfam PF10502 Signal peptidase, peptidase S26 255 302 1.6E-7 T 22-04-2016 IPR019533 Peptidase S26 APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 22-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 22-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 4.9E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 264 283 4.9E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 4.9E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 Pfam PF00717 Peptidase S24-like 86 158 1.9E-20 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 SUPERFAMILY SSF51306 78 323 3.92E-80 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 Gene3D G3DSA:2.170.230.10 155 263 1.6E-42 T 22-04-2016 IPR019766 Peptidase S26A, all-beta subdomain APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 PANTHER PTHR12383:SF27 246 308 4.1E-108 T 22-04-2016 APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 PANTHER PTHR12383:SF27 3 175 4.1E-108 T 22-04-2016 APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 159 5.8E-25 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 258 304 1.8E-17 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 ProSitePatterns PS00761 Signal peptidases I signature 3. 269 282 - T 22-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 PANTHER PTHR12383 246 308 4.1E-108 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APT61_RS05790 5ce12e8c53221187b9025d4eb4d1008d 324 PANTHER PTHR12383 3 175 4.1E-108 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 APT61_RS20850 11b7f4b4bce24cb394f8a84806f344e1 528 PANTHER PTHR33121:SF16 16 518 1.2E-192 T 22-04-2016 APT61_RS20850 11b7f4b4bce24cb394f8a84806f344e1 528 Pfam PF00563 EAL domain 275 505 1.7E-65 T 22-04-2016 IPR001633 EAL domain APT61_RS20850 11b7f4b4bce24cb394f8a84806f344e1 528 Gene3D G3DSA:3.20.20.450 275 518 1.2E-79 T 22-04-2016 IPR001633 EAL domain APT61_RS20850 11b7f4b4bce24cb394f8a84806f344e1 528 PANTHER PTHR33121 16 518 1.2E-192 T 22-04-2016 APT61_RS20850 11b7f4b4bce24cb394f8a84806f344e1 528 Pfam PF12792 CSS motif domain associated with EAL 40 242 3.8E-35 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain APT61_RS20850 11b7f4b4bce24cb394f8a84806f344e1 528 SMART SM00052 267 511 1.4E-105 T 22-04-2016 IPR001633 EAL domain APT61_RS20850 11b7f4b4bce24cb394f8a84806f344e1 528 SUPERFAMILY SSF141868 274 519 2.48E-75 T 22-04-2016 IPR001633 EAL domain APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 SUPERFAMILY SSF54211 307 458 1.82E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 SUPERFAMILY SSF54211 259 273 1.82E-42 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 Gene3D G3DSA:3.30.230.10 289 457 1.9E-39 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 Pfam PF13481 AAA domain 89 226 1.7E-14 T 22-04-2016 APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 455 1.0E-234 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 PANTHER PTHR32472 5 457 7.1E-226 T 22-04-2016 APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 SUPERFAMILY SSF52540 73 292 1.62E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 PRINTS PR01874 DNA repair protein radA signature 178 202 9.5E-94 T 22-04-2016 APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 PRINTS PR01874 DNA repair protein radA signature 252 278 9.5E-94 T 22-04-2016 APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 PRINTS PR01874 DNA repair protein radA signature 87 115 9.5E-94 T 22-04-2016 APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 PRINTS PR01874 DNA repair protein radA signature 326 349 9.5E-94 T 22-04-2016 APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 PRINTS PR01874 DNA repair protein radA signature 128 145 9.5E-94 T 22-04-2016 APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 PRINTS PR01874 DNA repair protein radA signature 217 245 9.5E-94 T 22-04-2016 APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 PRINTS PR01874 DNA repair protein radA signature 11 35 9.5E-94 T 22-04-2016 APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 Pfam PF13541 Subunit ChlI of Mg-chelatase 349 434 1.3E-9 T 22-04-2016 APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 Gene3D G3DSA:3.40.50.300 63 281 5.4E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19120 921f86bf9eeb20cccc3b00959f8c2b60 461 SMART SM00382 95 249 2.9E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS03135 b0bc3f151c00d5cff8f55c2515d0a408 295 PANTHER PTHR11627:SF18 69 201 7.4E-13 T 22-04-2016 APT61_RS03135 b0bc3f151c00d5cff8f55c2515d0a408 295 Gene3D G3DSA:3.20.20.70 34 284 1.7E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS03135 b0bc3f151c00d5cff8f55c2515d0a408 295 PANTHER PTHR11627 69 201 7.4E-13 T 22-04-2016 APT61_RS03135 b0bc3f151c00d5cff8f55c2515d0a408 295 PIRSF PIRSF038992 31 289 2.0E-74 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APT61_RS03135 b0bc3f151c00d5cff8f55c2515d0a408 295 Pfam PF01791 DeoC/LacD family aldolase 91 258 7.4E-16 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APT61_RS03135 b0bc3f151c00d5cff8f55c2515d0a408 295 SUPERFAMILY SSF51569 35 275 2.78E-60 T 22-04-2016 APT61_RS03135 b0bc3f151c00d5cff8f55c2515d0a408 295 SMART SM01133 51 259 3.8E-27 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APT61_RS01905 58d5669e1faa2ef68b3c68752de4389e 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.3E-28 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 APT61_RS01905 58d5669e1faa2ef68b3c68752de4389e 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.3E-28 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 APT61_RS01905 58d5669e1faa2ef68b3c68752de4389e 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.3E-28 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 APT61_RS01905 58d5669e1faa2ef68b3c68752de4389e 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.3E-28 T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 APT61_RS01905 58d5669e1faa2ef68b3c68752de4389e 289 PANTHER PTHR10285:SF72 1 284 8.2E-154 T 22-04-2016 APT61_RS01905 58d5669e1faa2ef68b3c68752de4389e 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 22-04-2016 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723|UniPathway: UPA00116 APT61_RS01905 58d5669e1faa2ef68b3c68752de4389e 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 4.2E-74 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 APT61_RS01905 58d5669e1faa2ef68b3c68752de4389e 289 SUPERFAMILY SSF52540 4 286 7.99E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01905 58d5669e1faa2ef68b3c68752de4389e 289 Gene3D G3DSA:3.40.50.300 1 288 7.7E-126 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01905 58d5669e1faa2ef68b3c68752de4389e 289 PANTHER PTHR10285 1 284 8.2E-154 T 22-04-2016 APT61_RS20595 7538402857f0f7eebe7a7b38bd822b1a 705 PANTHER PTHR32309:SF13 16 701 2.7E-75 T 22-04-2016 APT61_RS20595 7538402857f0f7eebe7a7b38bd822b1a 705 Pfam PF06564 Cellulose biosynthesis protein BcsQ 507 657 1.5E-5 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ APT61_RS20595 7538402857f0f7eebe7a7b38bd822b1a 705 Gene3D G3DSA:3.40.50.300 505 692 1.3E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20595 7538402857f0f7eebe7a7b38bd822b1a 705 PANTHER PTHR32309 16 701 2.7E-75 T 22-04-2016 APT61_RS20595 7538402857f0f7eebe7a7b38bd822b1a 705 SUPERFAMILY SSF52540 507 679 2.39E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20595 7538402857f0f7eebe7a7b38bd822b1a 705 Pfam PF02706 Chain length determinant protein 16 174 8.2E-18 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 PANTHER PTHR11177:SF166 248 577 1.4E-103 T 22-04-2016 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 PANTHER PTHR11177:SF166 869 887 1.4E-103 T 22-04-2016 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 PANTHER PTHR11177:SF166 220 232 1.4E-103 T 22-04-2016 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 PANTHER PTHR11177:SF166 157 195 1.4E-103 T 22-04-2016 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 SUPERFAMILY SSF54556 442 514 1.21E-20 T 22-04-2016 IPR029070 Chitinase insertion domain APT61_RS15170 354451f720e5415389f1577316fea6dc 897 Pfam PF08329 Chitinase A, N-terminal domain 22 153 4.3E-57 T 22-04-2016 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 SUPERFAMILY SSF51055 851 890 3.92E-11 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 SUPERFAMILY SSF81296 23 130 4.34E-31 T 22-04-2016 IPR014756 Immunoglobulin E-set APT61_RS15170 354451f720e5415389f1577316fea6dc 897 SUPERFAMILY SSF49299 569 658 7.06E-5 T 22-04-2016 IPR000601 PKD domain APT61_RS15170 354451f720e5415389f1577316fea6dc 897 Gene3D G3DSA:2.60.40.10 670 755 2.7E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS15170 354451f720e5415389f1577316fea6dc 897 SUPERFAMILY SSF51445 132 442 6.55E-97 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS15170 354451f720e5415389f1577316fea6dc 897 SUPERFAMILY SSF51445 516 557 6.55E-97 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS15170 354451f720e5415389f1577316fea6dc 897 Gene3D G3DSA:2.60.40.10 23 128 1.5E-37 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS15170 354451f720e5415389f1577316fea6dc 897 Gene3D G3DSA:2.10.10.20 798 847 6.4E-17 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 Gene3D G3DSA:2.10.10.20 851 891 3.5E-13 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 SUPERFAMILY SSF51055 794 846 2.88E-13 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 Gene3D G3DSA:3.20.20.80 134 443 4.9E-112 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 Gene3D G3DSA:3.20.20.80 520 561 4.9E-112 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 Gene3D G3DSA:3.10.50.10 444 517 5.0E-30 T 22-04-2016 IPR029070 Chitinase insertion domain APT61_RS15170 354451f720e5415389f1577316fea6dc 897 ProSitePatterns PS01095 Chitinases family 18 active site. 304 312 - T 22-04-2016 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6902 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 SMART SM00495 850 890 5.2E-8 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 SMART SM00495 801 844 7.1E-12 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 Pfam PF02839 Carbohydrate binding domain 801 837 2.9E-11 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 Pfam PF02839 Carbohydrate binding domain 851 887 1.3E-9 T 22-04-2016 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 PANTHER PTHR11177 248 577 1.4E-103 T 22-04-2016 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 PANTHER PTHR11177 869 887 1.4E-103 T 22-04-2016 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 PANTHER PTHR11177 220 232 1.4E-103 T 22-04-2016 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 PANTHER PTHR11177 157 195 1.4E-103 T 22-04-2016 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 SMART SM00636 156 543 2.3E-162 T 22-04-2016 IPR011583 Chitinase II GO:0004568|GO:0006032 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 Pfam PF02010 REJ domain 587 742 2.2E-5 T 22-04-2016 IPR002859 PKD/REJ-like domain APT61_RS15170 354451f720e5415389f1577316fea6dc 897 Pfam PF00704 Glycosyl hydrolases family 18 158 543 1.6E-83 T 22-04-2016 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0004553|GO:0005975 APT61_RS15170 354451f720e5415389f1577316fea6dc 897 SMART SM00089 669 755 3.8 T 22-04-2016 IPR022409 PKD/Chitinase domain APT61_RS15170 354451f720e5415389f1577316fea6dc 897 SMART SM00089 50 131 0.25 T 22-04-2016 IPR022409 PKD/Chitinase domain APT61_RS15170 354451f720e5415389f1577316fea6dc 897 SMART SM00089 573 662 0.21 T 22-04-2016 IPR022409 PKD/Chitinase domain APT61_RS10520 b42d9d66da89957d7f61d3f1a3e5739c 307 PANTHER PTHR30419:SF10 6 306 4.3E-160 T 22-04-2016 APT61_RS10520 b42d9d66da89957d7f61d3f1a3e5739c 307 Pfam PF03466 LysR substrate binding domain 101 305 2.2E-33 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS10520 b42d9d66da89957d7f61d3f1a3e5739c 307 Gene3D G3DSA:3.40.190.10 184 272 6.8E-8 T 22-04-2016 APT61_RS10520 b42d9d66da89957d7f61d3f1a3e5739c 307 PANTHER PTHR30419 6 306 4.3E-160 T 22-04-2016 APT61_RS10520 b42d9d66da89957d7f61d3f1a3e5739c 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 1.5E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10520 b42d9d66da89957d7f61d3f1a3e5739c 307 Gene3D G3DSA:3.40.190.10 103 183 5.5E-17 T 22-04-2016 APT61_RS10520 b42d9d66da89957d7f61d3f1a3e5739c 307 Gene3D G3DSA:1.10.10.10 10 91 3.6E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10520 b42d9d66da89957d7f61d3f1a3e5739c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10520 b42d9d66da89957d7f61d3f1a3e5739c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10520 b42d9d66da89957d7f61d3f1a3e5739c 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10520 b42d9d66da89957d7f61d3f1a3e5739c 307 SUPERFAMILY SSF46785 10 121 3.09E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10520 b42d9d66da89957d7f61d3f1a3e5739c 307 SUPERFAMILY SSF53850 99 305 2.41E-33 T 22-04-2016 APT61_RS12905 30b476241393f737c9dd77dca419dc3c 495 PANTHER PTHR30508:SF1 20 495 2.5E-289 T 22-04-2016 APT61_RS12905 30b476241393f737c9dd77dca419dc3c 495 SUPERFAMILY SSF101960 41 86 3.01E-137 T 22-04-2016 APT61_RS12905 30b476241393f737c9dd77dca419dc3c 495 SUPERFAMILY SSF101960 125 492 3.01E-137 T 22-04-2016 APT61_RS12905 30b476241393f737c9dd77dca419dc3c 495 PANTHER PTHR30508 20 495 2.5E-289 T 22-04-2016 APT61_RS12905 30b476241393f737c9dd77dca419dc3c 495 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 486 1.1E-193 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 APT61_RS12905 30b476241393f737c9dd77dca419dc3c 495 Pfam PF01458 Uncharacterized protein family (UPF0051) 234 466 2.6E-69 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APT61_RS13140 b292fe40e2f61c5ee147f978abab11f2 275 PANTHER PTHR23090 1 274 5.0E-165 T 22-04-2016 APT61_RS13140 b292fe40e2f61c5ee147f978abab11f2 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 31.123 T 22-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 APT61_RS13140 b292fe40e2f61c5ee147f978abab11f2 275 PANTHER PTHR23090:SF7 1 274 5.0E-165 T 22-04-2016 APT61_RS13140 b292fe40e2f61c5ee147f978abab11f2 275 Gene3D G3DSA:3.40.50.620 4 269 5.7E-66 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS13140 b292fe40e2f61c5ee147f978abab11f2 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 17 275 1.3E-81 T 22-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 APT61_RS13140 b292fe40e2f61c5ee147f978abab11f2 275 Pfam PF02540 NAD synthase 23 265 5.7E-76 T 22-04-2016 IPR022310 NAD/GMP synthase APT61_RS13140 b292fe40e2f61c5ee147f978abab11f2 275 SUPERFAMILY SSF52402 3 273 1.28E-84 T 22-04-2016 APT61_RS20405 b99f87920d9323fb7401686f15f3c875 1107 SUPERFAMILY SSF82689 985 1082 8.11E-16 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APT61_RS20405 b99f87920d9323fb7401686f15f3c875 1107 PANTHER PTHR30347 1 1105 0.0 T 22-04-2016 APT61_RS20405 b99f87920d9323fb7401686f15f3c875 1107 Gene3D G3DSA:3.30.70.100 989 1072 4.2E-7 T 22-04-2016 APT61_RS20405 b99f87920d9323fb7401686f15f3c875 1107 Pfam PF12795 Mechanosensitive ion channel porin domain 31 255 2.1E-54 T 22-04-2016 IPR024393 Mechanosensitive ion channel MscS, porin domain APT61_RS20405 b99f87920d9323fb7401686f15f3c875 1107 SUPERFAMILY SSF82861 834 916 4.84E-9 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APT61_RS20405 b99f87920d9323fb7401686f15f3c875 1107 Pfam PF00924 Mechanosensitive ion channel 875 1074 2.9E-53 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APT61_RS20405 b99f87920d9323fb7401686f15f3c875 1107 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 478 814 1.1E-113 T 22-04-2016 IPR025692 Mechanosensitive ion channel inner membrane domain 1 APT61_RS20405 b99f87920d9323fb7401686f15f3c875 1107 PANTHER PTHR30347:SF0 1 1105 0.0 T 22-04-2016 APT61_RS20405 b99f87920d9323fb7401686f15f3c875 1107 Gene3D G3DSA:2.30.30.60 933 982 8.9E-16 T 22-04-2016 APT61_RS20405 b99f87920d9323fb7401686f15f3c875 1107 SUPERFAMILY SSF50182 918 983 2.42E-16 T 22-04-2016 IPR010920 LSM domain APT61_RS17850 f0246b48be530b184d7ec6b353c316ee 318 Gene3D G3DSA:3.30.390.50 224 316 3.6E-21 T 22-04-2016 APT61_RS17850 f0246b48be530b184d7ec6b353c316ee 318 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 3 220 1.2E-50 T 22-04-2016 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 APT61_RS17850 f0246b48be530b184d7ec6b353c316ee 318 SUPERFAMILY SSF56176 1 220 2.73E-59 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APT61_RS17850 f0246b48be530b184d7ec6b353c316ee 318 PANTHER PTHR11908 162 316 1.7E-123 T 22-04-2016 APT61_RS17850 f0246b48be530b184d7ec6b353c316ee 318 PANTHER PTHR11908 1 119 1.7E-123 T 22-04-2016 APT61_RS17850 f0246b48be530b184d7ec6b353c316ee 318 PANTHER PTHR11908:SF70 162 316 1.7E-123 T 22-04-2016 APT61_RS17850 f0246b48be530b184d7ec6b353c316ee 318 PANTHER PTHR11908:SF70 1 119 1.7E-123 T 22-04-2016 APT61_RS17850 f0246b48be530b184d7ec6b353c316ee 318 Gene3D G3DSA:3.30.43.10 1 51 2.4E-19 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APT61_RS17850 f0246b48be530b184d7ec6b353c316ee 318 SUPERFAMILY SSF55447 224 315 1.31E-19 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APT61_RS17850 f0246b48be530b184d7ec6b353c316ee 318 Gene3D G3DSA:3.30.465.10 157 220 4.0E-33 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APT61_RS17850 f0246b48be530b184d7ec6b353c316ee 318 Gene3D G3DSA:3.30.465.10 56 113 4.0E-33 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APT61_RS17850 f0246b48be530b184d7ec6b353c316ee 318 SMART SM01092 226 314 5.9E-21 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APT61_RS17850 f0246b48be530b184d7ec6b353c316ee 318 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 227 299 1.4E-6 T 22-04-2016 IPR005107 CO dehydrogenase flavoprotein, C-terminal APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 PANTHER PTHR11964 1 376 2.2E-289 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 Gene3D G3DSA:3.30.300.10 244 381 3.7E-72 T 22-04-2016 APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 SUPERFAMILY SSF55973 3 109 6.28E-48 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 SUPERFAMILY SSF55973 233 382 3.49E-71 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 5.5E-202 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 7.3E-70 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 PIRSF PIRSF000497 1 382 3.2E-177 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 3.3E-46 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 2.9E-43 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 SUPERFAMILY SSF55973 112 232 1.37E-52 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 Gene3D G3DSA:3.30.300.10 136 233 1.3E-44 T 22-04-2016 APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 Gene3D G3DSA:3.30.300.10 11 135 6.0E-51 T 22-04-2016 APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 60.169 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APT61_RS04025 d896430d5c18323544af0b396cc5c535 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 APT61_RS21995 1d2a4fb36f3a0976ec72cbf5e40c8b36 168 PANTHER PTHR11228 11 94 2.5E-17 T 22-04-2016 APT61_RS21995 1d2a4fb36f3a0976ec72cbf5e40c8b36 168 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 166 6.0E-38 T 22-04-2016 APT61_RS21995 1d2a4fb36f3a0976ec72cbf5e40c8b36 168 PANTHER PTHR11228:SF24 11 94 2.5E-17 T 22-04-2016 APT61_RS00710 5c5b4d0a374cec0b0f127d4cc02b9477 366 PANTHER PTHR11061:SF25 6 366 5.8E-235 T 22-04-2016 APT61_RS00710 5c5b4d0a374cec0b0f127d4cc02b9477 366 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site APT61_RS00710 5c5b4d0a374cec0b0f127d4cc02b9477 366 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.603 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 APT61_RS00710 5c5b4d0a374cec0b0f127d4cc02b9477 366 SUPERFAMILY SSF53335 6 363 1.21E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS00710 5c5b4d0a374cec0b0f127d4cc02b9477 366 PANTHER PTHR11061 6 366 5.8E-235 T 22-04-2016 APT61_RS00710 5c5b4d0a374cec0b0f127d4cc02b9477 366 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 365 3.9E-184 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 APT61_RS00710 5c5b4d0a374cec0b0f127d4cc02b9477 366 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site APT61_RS00710 5c5b4d0a374cec0b0f127d4cc02b9477 366 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 365 5.1E-185 T 22-04-2016 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 APT61_RS00710 5c5b4d0a374cec0b0f127d4cc02b9477 366 Gene3D G3DSA:3.40.50.150 153 364 4.0E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS06845 45566b40ff42da3f93a62d051ef10526 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 166 3.6E-53 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 APT61_RS06845 45566b40ff42da3f93a62d051ef10526 166 PANTHER PTHR10371:SF7 10 166 1.4E-118 T 22-04-2016 APT61_RS06845 45566b40ff42da3f93a62d051ef10526 166 PANTHER PTHR10371 10 166 1.4E-118 T 22-04-2016 APT61_RS06845 45566b40ff42da3f93a62d051ef10526 166 PIRSF PIRSF000216 1 166 3.2E-54 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 APT61_RS06845 45566b40ff42da3f93a62d051ef10526 166 Gene3D G3DSA:3.40.30.10 86 164 7.8E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS06845 45566b40ff42da3f93a62d051ef10526 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 APT61_RS06845 45566b40ff42da3f93a62d051ef10526 166 SUPERFAMILY SSF52833 15 165 2.91E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS06845 45566b40ff42da3f93a62d051ef10526 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 23 166 3.8E-51 T 22-04-2016 APT61_RS06530 6432574b0129db3bd719903676332398 231 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 74 179 2.5E-17 T 22-04-2016 IPR010319 Transglutaminase-like cysteine peptidase, predicted APT61_RS06530 6432574b0129db3bd719903676332398 231 PANTHER PTHR39327 53 225 3.3E-76 T 22-04-2016 APT61_RS06530 6432574b0129db3bd719903676332398 231 SUPERFAMILY SSF54001 56 135 8.67E-9 T 22-04-2016 APT61_RS06530 6432574b0129db3bd719903676332398 231 PANTHER PTHR39327:SF1 53 225 3.3E-76 T 22-04-2016 APT61_RS10160 83f3e12db0d09f8a385302cfbee91fea 219 SUPERFAMILY SSF53335 3 215 2.46E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS10160 83f3e12db0d09f8a385302cfbee91fea 219 Gene3D G3DSA:3.40.50.150 2 217 5.8E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS10160 83f3e12db0d09f8a385302cfbee91fea 219 Pfam PF01596 O-methyltransferase 20 201 5.3E-37 T 22-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 APT61_RS10160 83f3e12db0d09f8a385302cfbee91fea 219 PANTHER PTHR10509 40 212 3.3E-54 T 22-04-2016 APT61_RS02775 3f01566e9f2271d88211ede1b6d8f0c7 282 PANTHER PTHR20941 15 277 1.4E-128 T 22-04-2016 APT61_RS02775 3f01566e9f2271d88211ede1b6d8f0c7 282 Gene3D G3DSA:3.20.20.20 12 273 2.9E-110 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 APT61_RS02775 3f01566e9f2271d88211ede1b6d8f0c7 282 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 APT61_RS02775 3f01566e9f2271d88211ede1b6d8f0c7 282 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 7.5E-103 T 22-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 APT61_RS02775 3f01566e9f2271d88211ede1b6d8f0c7 282 Pfam PF00809 Pterin binding enzyme 18 257 2.8E-89 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 APT61_RS02775 3f01566e9f2271d88211ede1b6d8f0c7 282 SUPERFAMILY SSF51717 7 273 2.88E-105 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 APT61_RS02775 3f01566e9f2271d88211ede1b6d8f0c7 282 PANTHER PTHR20941:SF1 15 277 1.4E-128 T 22-04-2016 APT61_RS02775 3f01566e9f2271d88211ede1b6d8f0c7 282 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 APT61_RS01350 e9b9ffeee94903f4dd060ee4cc9ab8c0 388 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 234 336 5.0E-27 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal APT61_RS01350 e9b9ffeee94903f4dd060ee4cc9ab8c0 388 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 68 228 2.4E-21 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal APT61_RS01350 e9b9ffeee94903f4dd060ee4cc9ab8c0 388 PANTHER PTHR11712 91 110 2.3E-55 T 22-04-2016 APT61_RS01350 e9b9ffeee94903f4dd060ee4cc9ab8c0 388 PANTHER PTHR11712 135 384 2.3E-55 T 22-04-2016 APT61_RS01350 e9b9ffeee94903f4dd060ee4cc9ab8c0 388 Gene3D G3DSA:3.40.47.10 49 228 2.2E-30 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS01350 e9b9ffeee94903f4dd060ee4cc9ab8c0 388 SUPERFAMILY SSF53901 201 387 2.66E-47 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS01350 e9b9ffeee94903f4dd060ee4cc9ab8c0 388 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 146 162 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site APT61_RS01350 e9b9ffeee94903f4dd060ee4cc9ab8c0 388 SMART SM00825 Beta-ketoacyl synthase 2 387 1.1E-8 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APT61_RS01350 e9b9ffeee94903f4dd060ee4cc9ab8c0 388 Gene3D G3DSA:3.40.47.10 240 387 3.6E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS01350 e9b9ffeee94903f4dd060ee4cc9ab8c0 388 SUPERFAMILY SSF53901 2 229 4.03E-35 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS20265 c632f8c0cceea4f0eb9aca973b2f292b 354 PANTHER PTHR15032:SF13 4 77 2.4E-158 T 22-04-2016 APT61_RS20265 c632f8c0cceea4f0eb9aca973b2f292b 354 PANTHER PTHR15032:SF13 94 354 2.4E-158 T 22-04-2016 APT61_RS20265 c632f8c0cceea4f0eb9aca973b2f292b 354 PANTHER PTHR15032 4 77 2.4E-158 T 22-04-2016 APT61_RS20265 c632f8c0cceea4f0eb9aca973b2f292b 354 PANTHER PTHR15032 94 354 2.4E-158 T 22-04-2016 APT61_RS20265 c632f8c0cceea4f0eb9aca973b2f292b 354 Pfam PF13483 Beta-lactamase superfamily domain 42 281 1.8E-15 T 22-04-2016 APT61_RS20265 c632f8c0cceea4f0eb9aca973b2f292b 354 Gene3D G3DSA:3.60.15.10 1 336 1.1E-129 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS20265 c632f8c0cceea4f0eb9aca973b2f292b 354 SUPERFAMILY SSF56281 36 302 5.04E-26 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS17325 69289e9c49bddaa6dbb917fb288e9250 432 SUPERFAMILY SSF109998 248 429 5.62E-47 T 22-04-2016 IPR027304 Trigger factor/SurA domain APT61_RS17325 69289e9c49bddaa6dbb917fb288e9250 432 Gene3D G3DSA:1.10.3120.10 216 388 1.1E-62 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APT61_RS17325 69289e9c49bddaa6dbb917fb288e9250 432 SUPERFAMILY SSF102735 1 131 5.75E-39 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APT61_RS17325 69289e9c49bddaa6dbb917fb288e9250 432 TIGRFAM TIGR00115 tig: trigger factor 13 412 1.3E-141 T 22-04-2016 IPR005215 Trigger factor GO:0015031 APT61_RS17325 69289e9c49bddaa6dbb917fb288e9250 432 SUPERFAMILY SSF54534 96 241 4.52E-36 T 22-04-2016 APT61_RS17325 69289e9c49bddaa6dbb917fb288e9250 432 Hamap MF_00303 Trigger factor [tig]. 1 418 21.873 T 22-04-2016 IPR005215 Trigger factor GO:0015031 APT61_RS17325 69289e9c49bddaa6dbb917fb288e9250 432 PANTHER PTHR30560:SF3 1 430 1.1E-145 T 22-04-2016 APT61_RS17325 69289e9c49bddaa6dbb917fb288e9250 432 PIRSF PIRSF003095 1 432 9.9E-130 T 22-04-2016 IPR005215 Trigger factor GO:0015031 APT61_RS17325 69289e9c49bddaa6dbb917fb288e9250 432 PANTHER PTHR30560 1 430 1.1E-145 T 22-04-2016 APT61_RS17325 69289e9c49bddaa6dbb917fb288e9250 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 237 1.1E-13 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APT61_RS17325 69289e9c49bddaa6dbb917fb288e9250 432 Gene3D G3DSA:3.30.70.1050 1 118 1.6E-39 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APT61_RS17325 69289e9c49bddaa6dbb917fb288e9250 432 Gene3D G3DSA:3.10.50.40 154 215 4.7E-8 T 22-04-2016 APT61_RS17325 69289e9c49bddaa6dbb917fb288e9250 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 1.6E-41 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 APT61_RS17325 69289e9c49bddaa6dbb917fb288e9250 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 9.4E-40 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APT61_RS13780 38c853b27a661ab08711e114b6aff7e7 416 Gene3D G3DSA:3.40.718.10 10 416 1.1E-168 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APT61_RS13780 38c853b27a661ab08711e114b6aff7e7 416 PANTHER PTHR11835:SF52 1 164 2.4E-245 T 22-04-2016 APT61_RS13780 38c853b27a661ab08711e114b6aff7e7 416 PANTHER PTHR11835:SF52 188 255 2.4E-245 T 22-04-2016 APT61_RS13780 38c853b27a661ab08711e114b6aff7e7 416 PANTHER PTHR11835:SF52 275 416 2.4E-245 T 22-04-2016 APT61_RS13780 38c853b27a661ab08711e114b6aff7e7 416 PANTHER PTHR11835 1 164 2.4E-245 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APT61_RS13780 38c853b27a661ab08711e114b6aff7e7 416 PANTHER PTHR11835 188 255 2.4E-245 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APT61_RS13780 38c853b27a661ab08711e114b6aff7e7 416 PANTHER PTHR11835 275 416 2.4E-245 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APT61_RS13780 38c853b27a661ab08711e114b6aff7e7 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 416 2.0E-238 T 22-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 APT61_RS13780 38c853b27a661ab08711e114b6aff7e7 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 APT61_RS13780 38c853b27a661ab08711e114b6aff7e7 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 412 5.2E-117 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APT61_RS13780 38c853b27a661ab08711e114b6aff7e7 416 SMART SM01329 28 412 5.4E-180 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APT61_RS13780 38c853b27a661ab08711e114b6aff7e7 416 SUPERFAMILY SSF53659 3 416 6.91E-150 T 22-04-2016 APT61_RS18630 193a8d70a8d1071622f15c98296c0e00 451 Pfam PF01225 Mur ligase family, catalytic domain 25 84 2.9E-10 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18630 193a8d70a8d1071622f15c98296c0e00 451 SUPERFAMILY SSF53244 312 445 2.29E-38 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS18630 193a8d70a8d1071622f15c98296c0e00 451 Gene3D G3DSA:3.40.1190.10 81 309 1.2E-76 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18630 193a8d70a8d1071622f15c98296c0e00 451 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 446 34.482 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS18630 193a8d70a8d1071622f15c98296c0e00 451 Gene3D G3DSA:3.90.190.20 312 447 1.5E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS18630 193a8d70a8d1071622f15c98296c0e00 451 PANTHER PTHR23135:SF3 10 447 1.4E-170 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS18630 193a8d70a8d1071622f15c98296c0e00 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 387 6.4E-13 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS18630 193a8d70a8d1071622f15c98296c0e00 451 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 28 445 8.4E-145 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS18630 193a8d70a8d1071622f15c98296c0e00 451 PANTHER PTHR23135 10 447 1.4E-170 T 22-04-2016 APT61_RS18630 193a8d70a8d1071622f15c98296c0e00 451 SUPERFAMILY SSF63418 1 96 3.66E-26 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18630 193a8d70a8d1071622f15c98296c0e00 451 Pfam PF08245 Mur ligase middle domain 105 292 3.9E-51 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18630 193a8d70a8d1071622f15c98296c0e00 451 Gene3D G3DSA:3.40.1390.10 1 79 6.4E-25 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18630 193a8d70a8d1071622f15c98296c0e00 451 SUPERFAMILY SSF53623 99 309 2.49E-59 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS16990 906508462d703a162d4f24be77b46917 69 SUPERFAMILY SSF159871 3 67 2.22E-10 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS16990 906508462d703a162d4f24be77b46917 69 Pfam PF07338 Protein of unknown function (DUF1471) 24 67 2.0E-6 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS16990 906508462d703a162d4f24be77b46917 69 Gene3D G3DSA:3.30.1660.10 24 67 2.6E-9 T 22-04-2016 IPR025543 Dodecin-like APT61_RS06785 b70fd8811be99c2b179a03a44c074168 712 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 1.0E-137 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APT61_RS06785 b70fd8811be99c2b179a03a44c074168 712 Pfam PF13500 AAA domain 3 229 1.3E-47 T 22-04-2016 APT61_RS06785 b70fd8811be99c2b179a03a44c074168 712 PIRSF PIRSF006107 1 712 0.0 T 22-04-2016 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APT61_RS06785 b70fd8811be99c2b179a03a44c074168 712 Gene3D G3DSA:3.40.50.300 3 222 5.2E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS06785 b70fd8811be99c2b179a03a44c074168 712 Gene3D G3DSA:3.40.50.10750 524 682 1.8E-67 T 22-04-2016 APT61_RS06785 b70fd8811be99c2b179a03a44c074168 712 PANTHER PTHR23406 178 712 4.4E-57 T 22-04-2016 APT61_RS06785 b70fd8811be99c2b179a03a44c074168 712 Pfam PF07085 DRTGG domain 233 344 5.0E-29 T 22-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APT61_RS06785 b70fd8811be99c2b179a03a44c074168 712 PANTHER PTHR23406:SF3 178 712 4.4E-57 T 22-04-2016 APT61_RS06785 b70fd8811be99c2b179a03a44c074168 712 SUPERFAMILY SSF75138 229 353 8.04E-25 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APT61_RS06785 b70fd8811be99c2b179a03a44c074168 712 SUPERFAMILY SSF53659 392 709 5.76E-94 T 22-04-2016 APT61_RS06785 b70fd8811be99c2b179a03a44c074168 712 Gene3D G3DSA:3.40.1390.20 225 365 1.3E-29 T 22-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like APT61_RS06785 b70fd8811be99c2b179a03a44c074168 712 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 3.0E-128 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APT61_RS06785 b70fd8811be99c2b179a03a44c074168 712 SUPERFAMILY SSF52540 3 240 6.9E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 SUPERFAMILY SSF53850 67 260 1.31E-12 T 22-04-2016 APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 SUPERFAMILY SSF47384 338 413 2.35E-9 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 Gene3D G3DSA:1.10.287.130 343 411 1.0E-5 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 547 9.7E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 514 9.7E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 PRINTS PR00344 Bacterial sensor protein C-terminal signature 518 528 9.7E-6 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 27 257 7.6E-30 T 22-04-2016 APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 SMART SM00388 349 418 1.9E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 Pfam PF00512 His Kinase A (phospho-acceptor) domain 349 413 6.8E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 Gene3D G3DSA:3.30.565.10 428 573 1.7E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 SUPERFAMILY SSF55874 421 571 1.57E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 SMART SM00387 465 573 1.2E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 470 571 2.9E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 Gene3D G3DSA:3.40.190.10 116 221 4.1E-11 T 22-04-2016 APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 PANTHER PTHR24423 333 555 7.6E-38 T 22-04-2016 APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 PANTHER PTHR24423 16 36 7.6E-38 T 22-04-2016 APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 PANTHER PTHR24423:SF485 333 555 7.6E-38 T 22-04-2016 APT61_RS14545 900513fde35dc52e41b13c52103a300d 579 PANTHER PTHR24423:SF485 16 36 7.6E-38 T 22-04-2016 APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 SUPERFAMILY SSF48295 362 465 3.4E-38 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 SUPERFAMILY SSF52540 132 342 2.15E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 PANTHER PTHR30050 1 106 1.6E-248 T 22-04-2016 APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 Pfam PF00308 Bacterial dnaA protein 132 348 6.6E-99 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 SMART SM00760 374 443 6.1E-45 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 Pfam PF11638 DnaA N-terminal domain 4 64 1.1E-19 T 22-04-2016 IPR024633 DnaA N-terminal domain APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 PANTHER PTHR30050:SF2 129 466 1.6E-248 T 22-04-2016 APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 PANTHER PTHR30050 129 466 1.6E-248 T 22-04-2016 APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 PANTHER PTHR30050:SF2 1 106 1.6E-248 T 22-04-2016 APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 465 34.477 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 Gene3D G3DSA:1.10.1750.10 365 465 7.3E-43 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 164 184 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 196 210 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 262 289 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 424 443 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 228 242 1.2E-54 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 375 443 1.0E-32 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 ProSitePatterns PS01008 DnaA protein signature. 424 443 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 464 1.3E-187 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 Gene3D G3DSA:1.10.8.60 297 364 5.6E-30 T 22-04-2016 APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 SMART SM00382 163 365 3.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS22085 66ff25393fdb6fe25d661b984378b538 466 Gene3D G3DSA:3.40.50.300 121 295 9.2E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20100 298d596beadb600a96f1de4f929f92c6 445 Gene3D G3DSA:3.30.465.10 342 425 7.4E-29 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APT61_RS20100 298d596beadb600a96f1de4f929f92c6 445 PANTHER PTHR22777 1 442 0.0 T 22-04-2016 APT61_RS20100 298d596beadb600a96f1de4f929f92c6 445 Pfam PF03471 Transporter associated domain 347 425 9.6E-23 T 22-04-2016 IPR005170 Transporter-associated domain APT61_RS20100 298d596beadb600a96f1de4f929f92c6 445 SMART SM01091 346 426 4.6E-30 T 22-04-2016 IPR005170 Transporter-associated domain APT61_RS20100 298d596beadb600a96f1de4f929f92c6 445 SUPERFAMILY SSF54631 200 335 1.07E-21 T 22-04-2016 APT61_RS20100 298d596beadb600a96f1de4f929f92c6 445 PANTHER PTHR22777:SF16 1 442 0.0 T 22-04-2016 APT61_RS20100 298d596beadb600a96f1de4f929f92c6 445 SUPERFAMILY SSF56176 344 428 1.69E-24 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APT61_RS20100 298d596beadb600a96f1de4f929f92c6 445 Pfam PF01595 Domain of unknown function DUF21 7 197 1.0E-37 T 22-04-2016 IPR002550 Domain of unknown function DUF21 APT61_RS20100 298d596beadb600a96f1de4f929f92c6 445 Pfam PF00571 CBS domain 284 333 0.0024 T 22-04-2016 IPR000644 CBS domain APT61_RS20100 298d596beadb600a96f1de4f929f92c6 445 Gene3D G3DSA:3.10.580.10 198 334 8.4E-14 T 22-04-2016 APT61_RS17125 7b836fcae4aa806b43ddf19c6314bbca 110 PANTHER PTHR33449 1 110 1.3E-55 T 22-04-2016 APT61_RS17125 7b836fcae4aa806b43ddf19c6314bbca 110 PANTHER PTHR33449:SF1 1 110 1.3E-55 T 22-04-2016 APT61_RS17125 7b836fcae4aa806b43ddf19c6314bbca 110 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 6 99 23.541 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APT61_RS17125 7b836fcae4aa806b43ddf19c6314bbca 110 PIRSF PIRSF004555 5 110 4.8E-39 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APT61_RS17125 7b836fcae4aa806b43ddf19c6314bbca 110 SUPERFAMILY SSF82607 12 104 1.31E-36 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APT61_RS17125 7b836fcae4aa806b43ddf19c6314bbca 110 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 106 6.3E-42 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APT61_RS17125 7b836fcae4aa806b43ddf19c6314bbca 110 Pfam PF02575 YbaB/EbfC DNA-binding family 12 100 1.6E-35 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APT61_RS17125 7b836fcae4aa806b43ddf19c6314bbca 110 Gene3D G3DSA:3.30.1310.10 2 110 4.4E-51 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 Pfam PF02080 TrkA-C domain 390 451 1.9E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 Pfam PF02080 TrkA-C domain 157 225 1.6E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 Gene3D G3DSA:3.30.70.1450 390 437 9.9E-5 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.5E-36 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.5E-36 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.5E-36 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.5E-36 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.5E-36 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 SUPERFAMILY SSF51735 1 152 6.45E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 Pfam PF02254 TrkA-N domain 235 350 1.1E-26 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 Pfam PF02254 TrkA-N domain 3 111 1.7E-29 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 Gene3D G3DSA:3.40.50.720 1 152 5.2E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 Gene3D G3DSA:3.40.50.720 233 376 3.5E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 PANTHER PTHR13789 416 440 2.2E-85 T 22-04-2016 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 PANTHER PTHR13789 1 170 2.2E-85 T 22-04-2016 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 SUPERFAMILY SSF116726 390 450 7.59E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 PANTHER PTHR13789:SF225 416 440 2.2E-85 T 22-04-2016 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 PANTHER PTHR13789:SF225 1 170 2.2E-85 T 22-04-2016 APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 SUPERFAMILY SSF51735 232 376 2.29E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02205 8a6de3c6c08ae3421d5e6b00a232547c 458 SUPERFAMILY SSF116726 148 226 1.26E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS01745 f3cf48b2f0917fba48031988da38f3a9 538 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 15 537 55.712 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APT61_RS01745 f3cf48b2f0917fba48031988da38f3a9 538 PANTHER PTHR30031:SF0 7 538 0.0 T 22-04-2016 APT61_RS01745 f3cf48b2f0917fba48031988da38f3a9 538 Gene3D G3DSA:3.90.228.20 350 537 9.7E-122 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APT61_RS01745 f3cf48b2f0917fba48031988da38f3a9 538 Gene3D G3DSA:3.90.228.20 227 289 9.7E-122 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APT61_RS01745 f3cf48b2f0917fba48031988da38f3a9 538 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 490 7.3E-212 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APT61_RS01745 f3cf48b2f0917fba48031988da38f3a9 538 SUPERFAMILY SSF53795 228 537 1.69E-129 T 22-04-2016 APT61_RS01745 f3cf48b2f0917fba48031988da38f3a9 538 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APT61_RS01745 f3cf48b2f0917fba48031988da38f3a9 538 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 6 538 9.8E-288 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APT61_RS01745 f3cf48b2f0917fba48031988da38f3a9 538 PANTHER PTHR30031 7 538 0.0 T 22-04-2016 APT61_RS01745 f3cf48b2f0917fba48031988da38f3a9 538 PIRSF PIRSF006294 3 538 8.9E-233 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 APT61_RS01745 f3cf48b2f0917fba48031988da38f3a9 538 SUPERFAMILY SSF68923 8 226 9.42E-91 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APT61_RS01745 f3cf48b2f0917fba48031988da38f3a9 538 Gene3D G3DSA:3.40.449.10 21 226 7.1E-89 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 APT61_RS20905 43ae010af2ebc195405373cbdee3ba69 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 8.4E-10 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APT61_RS20905 43ae010af2ebc195405373cbdee3ba69 327 SUPERFAMILY SSF51735 113 273 1.87E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS20905 43ae010af2ebc195405373cbdee3ba69 327 PANTHER PTHR11695 16 327 1.4E-128 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS20905 43ae010af2ebc195405373cbdee3ba69 327 Gene3D G3DSA:3.40.50.720 147 256 3.3E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS20905 43ae010af2ebc195405373cbdee3ba69 327 Gene3D G3DSA:3.90.180.10 5 146 2.7E-44 T 22-04-2016 IPR011032 GroES-like APT61_RS20905 43ae010af2ebc195405373cbdee3ba69 327 SMART SM00829 11 325 1.9E-26 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APT61_RS20905 43ae010af2ebc195405373cbdee3ba69 327 Pfam PF00107 Zinc-binding dehydrogenase 152 256 1.3E-29 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APT61_RS20905 43ae010af2ebc195405373cbdee3ba69 327 PANTHER PTHR11695:SF605 16 327 1.4E-128 T 22-04-2016 APT61_RS20905 43ae010af2ebc195405373cbdee3ba69 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 22-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 APT61_RS20905 43ae010af2ebc195405373cbdee3ba69 327 SUPERFAMILY SSF50129 8 142 7.46E-34 T 22-04-2016 IPR011032 GroES-like APT61_RS02095 1faa9c5830eee7c841f41339d8e812a0 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 3.7E-46 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APT61_RS02095 1faa9c5830eee7c841f41339d8e812a0 136 PANTHER PTHR12220 1 136 3.1E-75 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APT61_RS02095 1faa9c5830eee7c841f41339d8e812a0 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 38.025 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APT61_RS02095 1faa9c5830eee7c841f41339d8e812a0 136 SUPERFAMILY SSF54686 3 133 1.83E-54 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APT61_RS02095 1faa9c5830eee7c841f41339d8e812a0 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02095 1faa9c5830eee7c841f41339d8e812a0 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 1.1E-58 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APT61_RS02095 1faa9c5830eee7c841f41339d8e812a0 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02095 1faa9c5830eee7c841f41339d8e812a0 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 2.9E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APT61_RS02095 1faa9c5830eee7c841f41339d8e812a0 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 2.9E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APT61_RS02095 1faa9c5830eee7c841f41339d8e812a0 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 2.9E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APT61_RS02095 1faa9c5830eee7c841f41339d8e812a0 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 2.9E-40 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 APT61_RS02095 1faa9c5830eee7c841f41339d8e812a0 136 Gene3D G3DSA:3.90.1170.10 22 133 5.4E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 APT61_RS18110 3e30a378a9ba28968f0302eb4fd70745 343 Gene3D G3DSA:3.40.50.300 1 237 5.6E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18110 3e30a378a9ba28968f0302eb4fd70745 343 SMART SM00930 265 340 7.9E-24 T 22-04-2016 IPR018449 NIL domain APT61_RS18110 3e30a378a9ba28968f0302eb4fd70745 343 PANTHER PTHR24220:SF455 3 316 2.4E-193 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 APT61_RS18110 3e30a378a9ba28968f0302eb4fd70745 343 Pfam PF00005 ABC transporter 21 169 7.7E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS18110 3e30a378a9ba28968f0302eb4fd70745 343 Pfam PF09383 NIL domain 268 339 1.1E-19 T 22-04-2016 IPR018449 NIL domain APT61_RS18110 3e30a378a9ba28968f0302eb4fd70745 343 SUPERFAMILY SSF52540 1 240 3.3E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18110 3e30a378a9ba28968f0302eb4fd70745 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS18110 3e30a378a9ba28968f0302eb4fd70745 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 4.9E-206 T 22-04-2016 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 APT61_RS18110 3e30a378a9ba28968f0302eb4fd70745 343 SUPERFAMILY SSF55021 248 343 1.14E-25 T 22-04-2016 APT61_RS18110 3e30a378a9ba28968f0302eb4fd70745 343 Gene3D G3DSA:3.30.70.260 238 343 1.0E-31 T 22-04-2016 APT61_RS18110 3e30a378a9ba28968f0302eb4fd70745 343 SMART SM00382 30 218 5.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS18110 3e30a378a9ba28968f0302eb4fd70745 343 PANTHER PTHR24220 3 316 2.4E-193 T 22-04-2016 APT61_RS07860 26a90e166ecc5a5be8ea2765a66413bc 299 PANTHER PTHR21403:SF0 3 299 1.4E-135 T 22-04-2016 APT61_RS07860 26a90e166ecc5a5be8ea2765a66413bc 299 SUPERFAMILY SSF53850 6 224 1.97E-70 T 22-04-2016 APT61_RS07860 26a90e166ecc5a5be8ea2765a66413bc 299 Gene3D G3DSA:3.40.190.10 3 139 7.4E-54 T 22-04-2016 APT61_RS07860 26a90e166ecc5a5be8ea2765a66413bc 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 22-04-2016 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APT61_RS07860 26a90e166ecc5a5be8ea2765a66413bc 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.4E-24 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APT61_RS07860 26a90e166ecc5a5be8ea2765a66413bc 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 36.033 T 22-04-2016 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APT61_RS07860 26a90e166ecc5a5be8ea2765a66413bc 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 1.4E-48 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APT61_RS07860 26a90e166ecc5a5be8ea2765a66413bc 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 201 298 4.0E-33 T 22-04-2016 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APT61_RS07860 26a90e166ecc5a5be8ea2765a66413bc 299 Gene3D G3DSA:3.30.70.120 226 299 1.7E-31 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APT61_RS07860 26a90e166ecc5a5be8ea2765a66413bc 299 PANTHER PTHR21403 3 299 1.4E-135 T 22-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APT61_RS07860 26a90e166ecc5a5be8ea2765a66413bc 299 SUPERFAMILY SSF54913 226 298 7.11E-22 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APT61_RS07860 26a90e166ecc5a5be8ea2765a66413bc 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 2.0E-58 T 22-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 APT61_RS11850 637b6e517109cf784f064868def585a6 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS11850 637b6e517109cf784f064868def585a6 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS11850 637b6e517109cf784f064868def585a6 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.8E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS11850 637b6e517109cf784f064868def585a6 299 Gene3D G3DSA:3.40.190.10 95 193 3.7E-32 T 22-04-2016 APT61_RS11850 637b6e517109cf784f064868def585a6 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 3.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS11850 637b6e517109cf784f064868def585a6 299 Gene3D G3DSA:1.10.10.10 5 86 1.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11850 637b6e517109cf784f064868def585a6 299 Pfam PF03466 LysR substrate binding domain 95 294 2.7E-33 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS11850 637b6e517109cf784f064868def585a6 299 SUPERFAMILY SSF46785 4 82 4.36E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11850 637b6e517109cf784f064868def585a6 299 PANTHER PTHR30537 1 295 2.6E-94 T 22-04-2016 APT61_RS11850 637b6e517109cf784f064868def585a6 299 SUPERFAMILY SSF53850 95 295 5.61E-36 T 22-04-2016 APT61_RS11850 637b6e517109cf784f064868def585a6 299 PANTHER PTHR30537:SF26 1 295 2.6E-94 T 22-04-2016 APT61_RS03635 457c0f1201101aa024868363840432c4 602 PANTHER PTHR35339:SF1 9 503 1.8E-150 T 22-04-2016 APT61_RS03635 457c0f1201101aa024868363840432c4 602 PIRSF PIRSF014753 2 597 1.3E-164 T 22-04-2016 IPR016624 Uncharacterised conserved protein UCP014753 APT61_RS03635 457c0f1201101aa024868363840432c4 602 PANTHER PTHR35339 9 503 1.8E-150 T 22-04-2016 APT61_RS03635 457c0f1201101aa024868363840432c4 602 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 14 354 1.8E-119 T 22-04-2016 IPR016624 Uncharacterised conserved protein UCP014753 APT61_RS20065 30cdfcfd17fa8afdb37094bd763959bf 318 PANTHER PTHR32196 1 280 1.3E-158 T 22-04-2016 APT61_RS20065 30cdfcfd17fa8afdb37094bd763959bf 318 Pfam PF13407 Periplasmic binding protein domain 27 274 1.5E-43 T 22-04-2016 IPR025997 Periplasmic binding protein APT61_RS20065 30cdfcfd17fa8afdb37094bd763959bf 318 Gene3D G3DSA:3.40.50.2300 25 139 3.4E-29 T 22-04-2016 APT61_RS20065 30cdfcfd17fa8afdb37094bd763959bf 318 PANTHER PTHR32196:SF20 1 280 1.3E-158 T 22-04-2016 APT61_RS20065 30cdfcfd17fa8afdb37094bd763959bf 318 SUPERFAMILY SSF53822 23 310 4.21E-70 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS20065 30cdfcfd17fa8afdb37094bd763959bf 318 Gene3D G3DSA:3.40.50.2300 140 308 2.0E-43 T 22-04-2016 APT61_RS16635 4f25f9bea85aaff91860adbdffb34442 319 PANTHER PTHR30532:SF2 11 319 5.6E-155 T 22-04-2016 APT61_RS16635 4f25f9bea85aaff91860adbdffb34442 319 PANTHER PTHR30532 11 319 5.6E-155 T 22-04-2016 APT61_RS16635 4f25f9bea85aaff91860adbdffb34442 319 SUPERFAMILY SSF53807 31 307 6.28E-46 T 22-04-2016 APT61_RS16635 4f25f9bea85aaff91860adbdffb34442 319 Pfam PF01497 Periplasmic binding protein 49 297 8.9E-30 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APT61_RS16635 4f25f9bea85aaff91860adbdffb34442 319 Gene3D G3DSA:3.40.50.1980 158 318 1.6E-40 T 22-04-2016 APT61_RS16635 4f25f9bea85aaff91860adbdffb34442 319 Gene3D G3DSA:3.40.50.1980 29 157 4.1E-24 T 22-04-2016 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 SUPERFAMILY SSF50447 271 411 1.06E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 SUPERFAMILY SSF54211 486 610 2.25E-40 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 6.2E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 Gene3D G3DSA:3.30.70.240 610 696 7.5E-32 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 703 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 Gene3D G3DSA:3.30.230.10 491 609 1.1E-46 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 Gene3D G3DSA:3.30.70.870 413 487 1.4E-38 T 22-04-2016 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 111.664 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 PANTHER PTHR23115 310 702 0.0 T 22-04-2016 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 PANTHER PTHR23115 3 184 0.0 T 22-04-2016 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 PANTHER PTHR23115:SF66 310 702 0.0 T 22-04-2016 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 PANTHER PTHR23115:SF66 3 184 0.0 T 22-04-2016 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 Pfam PF03764 Elongation factor G, domain IV 486 609 4.6E-45 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 Gene3D G3DSA:3.40.50.300 7 293 2.0E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 Pfam PF00679 Elongation factor G C-terminus 611 696 2.1E-28 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 Pfam PF14492 Elongation Factor G, domain II 411 485 1.4E-33 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 SUPERFAMILY SSF54980 611 700 7.19E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 1.2E-67 T 22-04-2016 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 SMART SM00838 611 698 1.1E-49 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 SUPERFAMILY SSF52540 6 288 1.11E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 5.7E-33 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 Gene3D G3DSA:2.40.30.10 312 412 2.0E-37 T 22-04-2016 APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 SUPERFAMILY SSF54980 411 488 3.96E-25 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APT61_RS02030 c231a2e40b3a4436e10bdb06d0133f68 704 SMART SM00889 487 609 4.7E-72 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APT61_RS00810 220dbad6277daf135c57b64d86e76dc4 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 1.4E-136 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS00810 220dbad6277daf135c57b64d86e76dc4 491 Gene3D G3DSA:3.40.50.720 1 201 8.2E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00810 220dbad6277daf135c57b64d86e76dc4 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 1.3E-27 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS00810 220dbad6277daf135c57b64d86e76dc4 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 482 1.7E-23 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS00810 220dbad6277daf135c57b64d86e76dc4 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.4E-58 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS00810 220dbad6277daf135c57b64d86e76dc4 491 SUPERFAMILY SSF48179 210 370 1.46E-42 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS00810 220dbad6277daf135c57b64d86e76dc4 491 Gene3D G3DSA:1.10.1040.10 360 481 4.1E-17 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS00810 220dbad6277daf135c57b64d86e76dc4 491 SUPERFAMILY SSF51735 29 209 5.72E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00810 220dbad6277daf135c57b64d86e76dc4 491 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 22 485 39.005 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS00810 220dbad6277daf135c57b64d86e76dc4 491 SUPERFAMILY SSF48179 348 484 6.29E-41 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS11320 ad22417cc4c6f16a83e1947b1f0b5c3d 353 Gene3D G3DSA:2.130.10.10 39 261 1.5E-20 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APT61_RS11320 ad22417cc4c6f16a83e1947b1f0b5c3d 353 Gene3D G3DSA:2.130.10.10 262 348 1.2E-11 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APT61_RS11320 ad22417cc4c6f16a83e1947b1f0b5c3d 353 SUPERFAMILY SSF51004 41 337 1.28E-32 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 SUPERFAMILY SSF55052 161 225 4.97E-17 T 22-04-2016 IPR015162 CheY binding APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 PANTHER PTHR22617 1 659 0.0 T 22-04-2016 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 PANTHER PTHR22617:SF20 1 659 0.0 T 22-04-2016 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 Pfam PF01627 Hpt domain 8 105 3.0E-20 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 SUPERFAMILY SSF47226 5 126 1.3E-33 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 SMART SM00260 520 660 2.0E-43 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 Gene3D G3DSA:2.30.30.40 528 549 1.2E-24 T 22-04-2016 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 Gene3D G3DSA:2.30.30.40 616 659 1.2E-24 T 22-04-2016 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 SMART SM01231 280 343 4.3E-21 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 SMART SM00073 5 102 1.3E-35 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 Gene3D G3DSA:3.30.70.400 159 227 1.8E-26 T 22-04-2016 IPR015162 CheY binding APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 281 343 1.1E-17 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 391 527 2.0E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 Gene3D G3DSA:1.20.120.160 3 142 4.9E-44 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 Gene3D G3DSA:2.40.50.180 552 615 1.6E-14 T 22-04-2016 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 Gene3D G3DSA:1.10.287.560 281 344 4.5E-23 T 22-04-2016 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 447 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 482 1.6E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 Pfam PF01584 CheW-like domain 533 659 1.7E-25 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 Pfam PF09078 CheY binding 162 224 2.9E-19 T 22-04-2016 IPR015162 CheY binding APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 Gene3D G3DSA:3.30.565.10 345 527 5.5E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 SMART SM00387 388 528 1.2E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 SUPERFAMILY SSF50341 527 659 2.62E-30 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 SUPERFAMILY SSF55874 346 526 4.45E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS08415 76b18a45c044bcc1ece447eef55ee88e 673 SUPERFAMILY SSF47384 281 344 3.81E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS01815 a667fe7650e28eac9699f79d4ca94312 427 Gene3D G3DSA:3.30.70.1070 341 406 3.9E-6 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APT61_RS01815 a667fe7650e28eac9699f79d4ca94312 427 Hamap MF_02021 Cell division protein DamX [damX]. 1 427 24.993 T 22-04-2016 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 APT61_RS01815 a667fe7650e28eac9699f79d4ca94312 427 Pfam PF05036 Sporulation related domain 344 416 2.7E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APT61_RS01815 a667fe7650e28eac9699f79d4ca94312 427 SUPERFAMILY SSF110997 343 407 1.96E-7 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 SUPERFAMILY SSF82714 183 266 2.49E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 SUPERFAMILY SSF82693 40 135 3.49E-23 T 22-04-2016 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 Gene3D G3DSA:1.10.3850.10 794 1010 9.3E-55 T 22-04-2016 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 SUPERFAMILY SSF82866 812 1010 1.09E-43 T 22-04-2016 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.7E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.7E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 2.7E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 2.7E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 2.7E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.7E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 2.7E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 2.7E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 2.7E-86 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 Gene3D G3DSA:1.20.1640.10 285 501 6.2E-60 T 22-04-2016 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 SUPERFAMILY SSF82693 788 833 2.14E-5 T 22-04-2016 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 SUPERFAMILY SSF82693 662 701 2.14E-5 T 22-04-2016 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 SUPERFAMILY SSF82693 555 650 1.99E-17 T 22-04-2016 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 SUPERFAMILY SSF82714 703 785 1.1E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 PANTHER PTHR32063:SF34 1 1021 0.0 T 22-04-2016 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 27.254 T 22-04-2016 IPR023931 Multidrug resistance protein MdtC APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 SUPERFAMILY SSF82693 136 182 1.83E-22 T 22-04-2016 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 SUPERFAMILY SSF82693 268 324 1.83E-22 T 22-04-2016 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 Gene3D G3DSA:3.30.70.1430 40 142 3.4E-30 T 22-04-2016 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 PANTHER PTHR32063 1 1021 0.0 T 22-04-2016 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 Gene3D G3DSA:3.30.70.1430 557 649 4.8E-13 T 22-04-2016 APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 Gene3D G3DSA:3.30.2090.10 183 264 2.4E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 Gene3D G3DSA:3.30.2090.10 703 784 6.1E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS07605 8f31d67367f7c0d568349df85ce809e1 1025 SUPERFAMILY SSF82866 291 490 4.97E-49 T 22-04-2016 APT61_RS07655 dae936d0f510abe9bd9a124f47240591 378 PANTHER PTHR33619 1 378 3.8E-91 T 22-04-2016 APT61_RS07655 dae936d0f510abe9bd9a124f47240591 378 Gene3D G3DSA:1.20.5.70 346 378 3.3E-14 T 22-04-2016 APT61_RS07655 dae936d0f510abe9bd9a124f47240591 378 Gene3D G3DSA:3.10.560.10 245 345 2.2E-31 T 22-04-2016 APT61_RS07655 dae936d0f510abe9bd9a124f47240591 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 81 165 1.5E-26 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 APT61_RS07655 dae936d0f510abe9bd9a124f47240591 378 Gene3D G3DSA:3.10.560.10 165 244 2.7E-28 T 22-04-2016 APT61_RS07655 dae936d0f510abe9bd9a124f47240591 378 Gene3D G3DSA:3.30.1950.10 89 164 1.3E-32 T 22-04-2016 APT61_RS07655 dae936d0f510abe9bd9a124f47240591 378 PANTHER PTHR33619:SF3 1 378 3.8E-91 T 22-04-2016 APT61_RS07655 dae936d0f510abe9bd9a124f47240591 378 Pfam PF10531 SLBB domain 172 220 1.5E-8 T 22-04-2016 IPR019554 Soluble ligand binding domain APT61_RS13970 1687fa0f2d8429437d689c1a22613868 269 SUPERFAMILY SSF56752 2 256 9.29E-65 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APT61_RS13970 1687fa0f2d8429437d689c1a22613868 269 PANTHER PTHR11825 1 246 1.7E-88 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APT61_RS13970 1687fa0f2d8429437d689c1a22613868 269 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 APT61_RS13970 1687fa0f2d8429437d689c1a22613868 269 Gene3D G3DSA:3.20.10.10 123 258 1.9E-39 T 22-04-2016 APT61_RS13970 1687fa0f2d8429437d689c1a22613868 269 PANTHER PTHR11825:SF55 1 246 1.7E-88 T 22-04-2016 APT61_RS13970 1687fa0f2d8429437d689c1a22613868 269 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 4.2E-110 T 22-04-2016 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543|UniPathway: UPA00077 APT61_RS13970 1687fa0f2d8429437d689c1a22613868 269 Pfam PF01063 Amino-transferase class IV 24 246 7.2E-46 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APT61_RS13970 1687fa0f2d8429437d689c1a22613868 269 Gene3D G3DSA:3.30.470.10 1 106 2.2E-31 T 22-04-2016 APT61_RS22080 7a516adcc68eeca7b30105099f1942aa 367 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 3.8E-40 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS22080 7a516adcc68eeca7b30105099f1942aa 367 SUPERFAMILY SSF55979 1 121 2.07E-25 T 22-04-2016 APT61_RS22080 7a516adcc68eeca7b30105099f1942aa 367 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 1.1E-39 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS22080 7a516adcc68eeca7b30105099f1942aa 367 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 366 2.9E-44 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS22080 7a516adcc68eeca7b30105099f1942aa 367 SMART SM00480 17 363 8.5E-170 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS22080 7a516adcc68eeca7b30105099f1942aa 367 PIRSF PIRSF000804 1 367 3.1E-115 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS22080 7a516adcc68eeca7b30105099f1942aa 367 SUPERFAMILY SSF55979 245 367 8.75E-36 T 22-04-2016 APT61_RS22080 7a516adcc68eeca7b30105099f1942aa 367 SUPERFAMILY SSF55979 125 244 3.14E-30 T 22-04-2016 APT61_RS22080 7a516adcc68eeca7b30105099f1942aa 367 Gene3D G3DSA:3.10.150.10 1 121 7.6E-32 T 22-04-2016 APT61_RS22080 7a516adcc68eeca7b30105099f1942aa 367 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 367 3.4E-111 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS22080 7a516adcc68eeca7b30105099f1942aa 367 Gene3D G3DSA:3.10.150.10 249 367 3.9E-37 T 22-04-2016 APT61_RS22080 7a516adcc68eeca7b30105099f1942aa 367 Gene3D G3DSA:3.10.150.10 122 248 1.2E-38 T 22-04-2016 APT61_RS10475 db56a6ca44e679cf659552effab70792 457 Gene3D G3DSA:3.30.465.10 97 205 7.3E-20 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APT61_RS10475 db56a6ca44e679cf659552effab70792 457 Pfam PF01565 FAD binding domain 39 171 4.4E-33 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APT61_RS10475 db56a6ca44e679cf659552effab70792 457 Gene3D G3DSA:3.30.43.10 29 96 5.3E-11 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APT61_RS10475 db56a6ca44e679cf659552effab70792 457 Pfam PF08031 Berberine and berberine like 411 455 2.3E-11 T 22-04-2016 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 APT61_RS10475 db56a6ca44e679cf659552effab70792 457 SUPERFAMILY SSF56176 12 205 1.36E-57 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APT61_RS10475 db56a6ca44e679cf659552effab70792 457 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 39 72 - T 22-04-2016 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 APT61_RS10475 db56a6ca44e679cf659552effab70792 457 PANTHER PTHR11748:SF86 4 456 2.3E-99 T 22-04-2016 APT61_RS10475 db56a6ca44e679cf659552effab70792 457 PANTHER PTHR11748 4 456 2.3E-99 T 22-04-2016 APT61_RS05890 3cc61e4a9439a6ccef89ba17057dcdb0 378 Gene3D G3DSA:1.20.1250.20 8 182 5.4E-17 T 22-04-2016 APT61_RS05890 3cc61e4a9439a6ccef89ba17057dcdb0 378 Gene3D G3DSA:1.20.1250.20 205 371 6.0E-22 T 22-04-2016 APT61_RS05890 3cc61e4a9439a6ccef89ba17057dcdb0 378 SUPERFAMILY SSF103473 7 371 1.28E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS05890 3cc61e4a9439a6ccef89ba17057dcdb0 378 PIRSF PIRSF004925 1 378 2.0E-116 T 22-04-2016 IPR026032 Probable 3-phenylpropionic acid transporter APT61_RS05890 3cc61e4a9439a6ccef89ba17057dcdb0 378 Pfam PF12832 MFS_1 like family 8 359 2.1E-46 T 22-04-2016 IPR024989 Major facilitator superfamily associated domain APT61_RS05890 3cc61e4a9439a6ccef89ba17057dcdb0 378 PANTHER PTHR23522 1 378 1.3E-149 T 22-04-2016 APT61_RS05890 3cc61e4a9439a6ccef89ba17057dcdb0 378 PANTHER PTHR23522:SF3 1 378 1.3E-149 T 22-04-2016 APT61_RS09725 6a0b20cf13f931b1f8b7a1e60a886669 759 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 684 729 1.5E-6 T 22-04-2016 IPR005194 Glycoside hydrolase family 65, C-terminal APT61_RS09725 6a0b20cf13f931b1f8b7a1e60a886669 759 PANTHER PTHR11051:SF8 16 721 8.1E-177 T 22-04-2016 APT61_RS09725 6a0b20cf13f931b1f8b7a1e60a886669 759 Gene3D G3DSA:2.60.420.10 667 734 5.4E-20 T 22-04-2016 APT61_RS09725 6a0b20cf13f931b1f8b7a1e60a886669 759 PIRSF PIRSF036289 3 742 1.7E-218 T 22-04-2016 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase APT61_RS09725 6a0b20cf13f931b1f8b7a1e60a886669 759 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 302 680 6.3E-141 T 22-04-2016 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 APT61_RS09725 6a0b20cf13f931b1f8b7a1e60a886669 759 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 11 239 3.2E-51 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 APT61_RS09725 6a0b20cf13f931b1f8b7a1e60a886669 759 Gene3D G3DSA:2.70.98.40 7 244 8.0E-62 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 APT61_RS09725 6a0b20cf13f931b1f8b7a1e60a886669 759 Gene3D G3DSA:1.50.10.10 297 666 9.5E-124 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APT61_RS09725 6a0b20cf13f931b1f8b7a1e60a886669 759 SUPERFAMILY SSF74650 7 240 5.02E-51 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APT61_RS09725 6a0b20cf13f931b1f8b7a1e60a886669 759 PANTHER PTHR11051 16 721 8.1E-177 T 22-04-2016 APT61_RS09725 6a0b20cf13f931b1f8b7a1e60a886669 759 SUPERFAMILY SSF48208 253 723 1.02E-106 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APT61_RS17825 a86d77e06f7684074fd7b7693d018e40 340 Pfam PF12833 Helix-turn-helix domain 252 330 9.0E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS17825 a86d77e06f7684074fd7b7693d018e40 340 Gene3D G3DSA:1.10.10.60 235 281 1.0E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS17825 a86d77e06f7684074fd7b7693d018e40 340 SUPERFAMILY SSF46689 229 279 1.34E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS17825 a86d77e06f7684074fd7b7693d018e40 340 SMART SM00342 245 328 4.1E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS17825 a86d77e06f7684074fd7b7693d018e40 340 Gene3D G3DSA:1.10.10.60 282 333 4.0E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS17825 a86d77e06f7684074fd7b7693d018e40 340 Pfam PF01965 DJ-1/PfpI family 59 189 1.8E-12 T 22-04-2016 IPR002818 DJ-1/PfpI APT61_RS17825 a86d77e06f7684074fd7b7693d018e40 340 PANTHER PTHR11019 55 336 1.2E-39 T 22-04-2016 APT61_RS17825 a86d77e06f7684074fd7b7693d018e40 340 Gene3D G3DSA:3.40.50.880 18 234 1.8E-31 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS17825 a86d77e06f7684074fd7b7693d018e40 340 SUPERFAMILY SSF46689 281 332 1.03E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS17825 a86d77e06f7684074fd7b7693d018e40 340 PANTHER PTHR11019:SF68 55 336 1.2E-39 T 22-04-2016 APT61_RS17825 a86d77e06f7684074fd7b7693d018e40 340 SUPERFAMILY SSF52317 18 207 5.96E-36 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS17825 a86d77e06f7684074fd7b7693d018e40 340 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 282 324 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS12840 635a745d5a751049d471a6425cd34f7f 207 Pfam PF00072 Response regulator receiver domain 5 116 4.6E-15 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS12840 635a745d5a751049d471a6425cd34f7f 207 SMART SM00448 3 116 7.3E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS12840 635a745d5a751049d471a6425cd34f7f 207 SUPERFAMILY SSF52172 5 155 6.5E-25 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS12840 635a745d5a751049d471a6425cd34f7f 207 Gene3D G3DSA:1.10.10.10 143 197 6.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS12840 635a745d5a751049d471a6425cd34f7f 207 PANTHER PTHR26402 3 195 8.7E-43 T 22-04-2016 APT61_RS12840 635a745d5a751049d471a6425cd34f7f 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS12840 635a745d5a751049d471a6425cd34f7f 207 Gene3D G3DSA:3.40.50.2300 5 142 2.3E-22 T 22-04-2016 APT61_RS12840 635a745d5a751049d471a6425cd34f7f 207 PANTHER PTHR26402:SF613 3 195 8.7E-43 T 22-04-2016 APT61_RS12840 635a745d5a751049d471a6425cd34f7f 207 SUPERFAMILY SSF46894 136 196 2.3E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS12840 635a745d5a751049d471a6425cd34f7f 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 195 5.3E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS12840 635a745d5a751049d471a6425cd34f7f 207 SMART SM00421 140 197 5.8E-21 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS12840 635a745d5a751049d471a6425cd34f7f 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.1E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS12840 635a745d5a751049d471a6425cd34f7f 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.1E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS12840 635a745d5a751049d471a6425cd34f7f 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.1E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08975 e6f5e991ad3104f0258d332de02a2fcd 318 SMART SM00342 226 309 6.7E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS08975 e6f5e991ad3104f0258d332de02a2fcd 318 Gene3D G3DSA:2.60.120.10 41 129 5.6E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS08975 e6f5e991ad3104f0258d332de02a2fcd 318 Pfam PF12852 Cupin 7 194 8.6E-33 T 22-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain APT61_RS08975 e6f5e991ad3104f0258d332de02a2fcd 318 Gene3D G3DSA:1.10.10.60 208 263 1.4E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS08975 e6f5e991ad3104f0258d332de02a2fcd 318 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 263 305 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS08975 e6f5e991ad3104f0258d332de02a2fcd 318 Gene3D G3DSA:1.10.10.60 264 312 8.7E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS08975 e6f5e991ad3104f0258d332de02a2fcd 318 Pfam PF12833 Helix-turn-helix domain 232 310 9.0E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS08975 e6f5e991ad3104f0258d332de02a2fcd 318 PANTHER PTHR11019 127 317 6.2E-48 T 22-04-2016 APT61_RS08975 e6f5e991ad3104f0258d332de02a2fcd 318 PANTHER PTHR11019 39 111 6.2E-48 T 22-04-2016 APT61_RS08975 e6f5e991ad3104f0258d332de02a2fcd 318 SUPERFAMILY SSF46689 209 260 1.16E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS08975 e6f5e991ad3104f0258d332de02a2fcd 318 PANTHER PTHR11019:SF77 127 317 6.2E-48 T 22-04-2016 APT61_RS08975 e6f5e991ad3104f0258d332de02a2fcd 318 PANTHER PTHR11019:SF77 39 111 6.2E-48 T 22-04-2016 APT61_RS08975 e6f5e991ad3104f0258d332de02a2fcd 318 SUPERFAMILY SSF46689 262 311 7.17E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS16965 a8f8328fff506a7d32541ae9deab1784 338 Gene3D G3DSA:3.40.50.2300 176 319 2.1E-34 T 22-04-2016 APT61_RS16965 a8f8328fff506a7d32541ae9deab1784 338 Gene3D G3DSA:1.10.260.40 4 55 5.4E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS16965 a8f8328fff506a7d32541ae9deab1784 338 PANTHER PTHR30146 3 337 7.7E-79 T 22-04-2016 APT61_RS16965 a8f8328fff506a7d32541ae9deab1784 338 SUPERFAMILY SSF53822 63 337 3.08E-49 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS16965 a8f8328fff506a7d32541ae9deab1784 338 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 322 9.4E-31 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APT61_RS16965 a8f8328fff506a7d32541ae9deab1784 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS16965 a8f8328fff506a7d32541ae9deab1784 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 50 8.2E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS16965 a8f8328fff506a7d32541ae9deab1784 338 Gene3D G3DSA:3.40.50.2300 56 175 9.3E-34 T 22-04-2016 APT61_RS16965 a8f8328fff506a7d32541ae9deab1784 338 SMART SM00354 3 73 1.2E-28 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS16965 a8f8328fff506a7d32541ae9deab1784 338 SUPERFAMILY SSF47413 2 61 3.56E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS08805 fa40ffec8d779340ed68c2d9a6218594 324 SUPERFAMILY SSF53062 3 128 5.1E-37 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APT61_RS08805 fa40ffec8d779340ed68c2d9a6218594 324 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 164 312 1.8E-55 T 22-04-2016 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 APT61_RS08805 fa40ffec8d779340ed68c2d9a6218594 324 SUPERFAMILY SSF52728 163 322 2.88E-54 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APT61_RS08805 fa40ffec8d779340ed68c2d9a6218594 324 PANTHER PTHR33799 3 324 4.0E-227 T 22-04-2016 APT61_RS08805 fa40ffec8d779340ed68c2d9a6218594 324 Gene3D G3DSA:3.40.50.510 3 133 2.0E-48 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APT61_RS08805 fa40ffec8d779340ed68c2d9a6218594 324 Pfam PF03610 PTS system fructose IIA component 5 116 5.2E-34 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APT61_RS08805 fa40ffec8d779340ed68c2d9a6218594 324 PANTHER PTHR33799:SF3 3 324 4.0E-227 T 22-04-2016 APT61_RS08805 fa40ffec8d779340ed68c2d9a6218594 324 Gene3D G3DSA:3.40.35.10 163 322 4.7E-67 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APT61_RS08805 fa40ffec8d779340ed68c2d9a6218594 324 Pfam PF03830 PTS system sorbose subfamily IIB component 165 312 8.5E-55 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APT61_RS08805 fa40ffec8d779340ed68c2d9a6218594 324 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 2 117 8.3E-50 T 22-04-2016 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS11970 32133002583e6ece623d8353a5a0d135 160 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 22-04-2016 IPR029760 Glutathione peroxidase conserved site APT61_RS11970 32133002583e6ece623d8353a5a0d135 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 24 39 - T 22-04-2016 IPR029759 Glutathione peroxidase active site APT61_RS11970 32133002583e6ece623d8353a5a0d135 160 Pfam PF00255 Glutathione peroxidase 4 111 3.2E-40 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APT61_RS11970 32133002583e6ece623d8353a5a0d135 160 SUPERFAMILY SSF52833 3 158 2.6E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS11970 32133002583e6ece623d8353a5a0d135 160 PANTHER PTHR11592 1 159 1.7E-86 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APT61_RS11970 32133002583e6ece623d8353a5a0d135 160 PRINTS PR01011 Glutathione peroxidase family signature 122 131 7.3E-21 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APT61_RS11970 32133002583e6ece623d8353a5a0d135 160 PRINTS PR01011 Glutathione peroxidase family signature 57 73 7.3E-21 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APT61_RS11970 32133002583e6ece623d8353a5a0d135 160 PRINTS PR01011 Glutathione peroxidase family signature 22 39 7.3E-21 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APT61_RS11970 32133002583e6ece623d8353a5a0d135 160 PIRSF PIRSF000303 1 159 6.3E-66 T 22-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 APT61_RS11970 32133002583e6ece623d8353a5a0d135 160 Gene3D G3DSA:3.40.30.10 3 159 1.2E-68 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS07185 309411881669a044c7697015d3408ccb 393 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 19 392 2.8E-186 T 22-04-2016 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 APT61_RS07185 309411881669a044c7697015d3408ccb 393 Pfam PF07690 Major Facilitator Superfamily 21 345 5.8E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS07185 309411881669a044c7697015d3408ccb 393 SUPERFAMILY SSF103473 19 390 3.66E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS07185 309411881669a044c7697015d3408ccb 393 Gene3D G3DSA:1.20.1250.20 19 201 7.5E-20 T 22-04-2016 APT61_RS07185 309411881669a044c7697015d3408ccb 393 Gene3D G3DSA:1.20.1250.20 213 391 1.4E-25 T 22-04-2016 APT61_RS07185 309411881669a044c7697015d3408ccb 393 PANTHER PTHR23535 4 393 3.2E-210 T 22-04-2016 APT61_RS07185 309411881669a044c7697015d3408ccb 393 PANTHER PTHR23535:SF2 4 393 3.2E-210 T 22-04-2016 APT61_RS13885 7ec65fb014b29620d95e5f274d81b9b3 317 Gene3D G3DSA:2.40.440.10 96 241 7.4E-33 T 22-04-2016 APT61_RS13885 7ec65fb014b29620d95e5f274d81b9b3 317 PANTHER PTHR30582:SF9 56 315 1.0E-188 T 22-04-2016 APT61_RS13885 7ec65fb014b29620d95e5f274d81b9b3 317 PANTHER PTHR30582 56 315 1.0E-188 T 22-04-2016 APT61_RS13885 7ec65fb014b29620d95e5f274d81b9b3 317 SUPERFAMILY SSF141523 101 240 1.7E-27 T 22-04-2016 APT61_RS13885 7ec65fb014b29620d95e5f274d81b9b3 317 Pfam PF01476 LysM domain 47 91 8.8E-7 T 22-04-2016 IPR018392 LysM domain APT61_RS13885 7ec65fb014b29620d95e5f274d81b9b3 317 Pfam PF03734 L,D-transpeptidase catalytic domain 103 240 5.1E-19 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APT61_RS13885 7ec65fb014b29620d95e5f274d81b9b3 317 SUPERFAMILY SSF54106 47 91 9.94E-5 T 22-04-2016 IPR018392 LysM domain APT61_RS13885 7ec65fb014b29620d95e5f274d81b9b3 317 Gene3D G3DSA:3.10.350.10 47 91 8.6E-7 T 22-04-2016 IPR018392 LysM domain APT61_RS13885 7ec65fb014b29620d95e5f274d81b9b3 317 SMART SM00257 45 91 5.6E-7 T 22-04-2016 IPR018392 LysM domain APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 Gene3D G3DSA:3.90.105.10 27 50 3.0E-23 T 22-04-2016 APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 Gene3D G3DSA:3.90.105.10 143 163 3.0E-23 T 22-04-2016 APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 PANTHER PTHR10192:SF11 1 410 1.9E-251 T 22-04-2016 APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 Gene3D G3DSA:2.40.340.10 330 402 2.4E-35 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 Pfam PF03454 MoeA C-terminal region (domain IV) 332 404 1.9E-21 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 SUPERFAMILY SSF53218 178 321 2.36E-42 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 Gene3D G3DSA:3.40.980.10 164 329 6.8E-64 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 SMART SM00852 181 318 5.2E-43 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 Gene3D G3DSA:2.170.190.11 51 142 6.0E-35 T 22-04-2016 APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 PANTHER PTHR10192 1 410 1.9E-251 T 22-04-2016 APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 Pfam PF00994 Probable molybdopterin binding domain 183 317 4.7E-26 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 SUPERFAMILY SSF63882 7 177 1.7E-58 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 SUPERFAMILY SSF63867 328 407 1.57E-25 T 22-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 314 8.2E-34 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 254 287 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 APT61_RS15560 75ca0c557e487a5bc3325ceeba72f03b 410 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 168 5.9E-39 T 22-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 TIGRFAM TIGR01273 speA: arginine decarboxylase 5 630 2.7E-277 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 Gene3D G3DSA:2.40.37.10 330 354 2.4E-12 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 Gene3D G3DSA:2.40.37.10 453 585 2.4E-12 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PANTHER PTHR11482 437 595 2.2E-281 T 22-04-2016 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PANTHER PTHR11482 1 364 2.2E-281 T 22-04-2016 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PIRSF PIRSF001336 1 632 6.8E-255 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 2 631 43.153 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 73 342 3.8E-72 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 98 116 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 SUPERFAMILY SSF51419 66 343 3.92E-67 T 22-04-2016 IPR029066 PLP-binding barrel APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 Gene3D G3DSA:3.20.20.10 68 329 2.9E-60 T 22-04-2016 IPR029066 PLP-binding barrel APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 275 288 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PRINTS PR01180 Arginine decarboxylase signature 462 483 2.6E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PRINTS PR01180 Arginine decarboxylase signature 144 159 2.6E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PRINTS PR01180 Arginine decarboxylase signature 487 512 2.6E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PRINTS PR01180 Arginine decarboxylase signature 540 561 2.6E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PRINTS PR01180 Arginine decarboxylase signature 66 81 2.6E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PRINTS PR01180 Arginine decarboxylase signature 170 191 2.6E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PRINTS PR01180 Arginine decarboxylase signature 321 338 2.6E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PRINTS PR01180 Arginine decarboxylase signature 194 216 2.6E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PRINTS PR01180 Arginine decarboxylase signature 90 104 2.6E-74 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PANTHER PTHR11482:SF36 437 595 2.2E-281 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PANTHER PTHR11482:SF36 1 364 2.2E-281 T 22-04-2016 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 5.2E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 540 553 5.2E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 331 350 5.2E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 120 132 5.2E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 237 250 5.2E-19 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 346 559 1.4E-23 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 APT61_RS04030 d3ba8295bf3ff0375aaaddf100132bbb 632 SUPERFAMILY SSF50621 456 559 3.84E-7 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APT61_RS12160 6782582992074a1734b53238f5187596 339 PANTHER PTHR30535:SF7 159 332 5.0E-35 T 22-04-2016 APT61_RS12160 6782582992074a1734b53238f5187596 339 SUPERFAMILY SSF53807 43 332 5.89E-43 T 22-04-2016 APT61_RS12160 6782582992074a1734b53238f5187596 339 Gene3D G3DSA:3.40.50.1980 193 332 6.1E-23 T 22-04-2016 APT61_RS12160 6782582992074a1734b53238f5187596 339 PANTHER PTHR30535:SF7 1 142 5.0E-35 T 22-04-2016 APT61_RS12160 6782582992074a1734b53238f5187596 339 Gene3D G3DSA:3.40.50.1980 43 189 3.0E-16 T 22-04-2016 APT61_RS12160 6782582992074a1734b53238f5187596 339 PANTHER PTHR30535 159 332 5.0E-35 T 22-04-2016 APT61_RS12160 6782582992074a1734b53238f5187596 339 PANTHER PTHR30535 1 142 5.0E-35 T 22-04-2016 APT61_RS12160 6782582992074a1734b53238f5187596 339 Pfam PF01497 Periplasmic binding protein 46 311 1.7E-38 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APT61_RS19640 34151e113f04722d419d19021580d06d 373 PANTHER PTHR13096 7 323 2.5E-57 T 22-04-2016 APT61_RS19640 34151e113f04722d419d19021580d06d 373 Gene3D G3DSA:2.60.120.650 7 204 4.9E-41 T 22-04-2016 APT61_RS19640 34151e113f04722d419d19021580d06d 373 SUPERFAMILY SSF51197 6 292 1.25E-72 T 22-04-2016 APT61_RS19640 34151e113f04722d419d19021580d06d 373 Pfam PF08007 Cupin superfamily protein 10 309 8.2E-100 T 22-04-2016 IPR003347 JmjC domain APT61_RS19640 34151e113f04722d419d19021580d06d 373 SMART SM00558 92 215 1.8E-6 T 22-04-2016 IPR003347 JmjC domain APT61_RS12940 a07cb4a0f133cc288e96ab6292c18c47 277 PANTHER PTHR31756 1 277 4.1E-128 T 22-04-2016 APT61_RS12940 a07cb4a0f133cc288e96ab6292c18c47 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 6 276 72.771 T 22-04-2016 IPR026530 Phosphoenolpyruvate synthase regulatory protein APT61_RS12940 a07cb4a0f133cc288e96ab6292c18c47 277 Pfam PF03618 Kinase/pyrophosphorylase 9 267 6.9E-72 T 22-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 APT61_RS12940 a07cb4a0f133cc288e96ab6292c18c47 277 PANTHER PTHR31756:SF3 1 277 4.1E-128 T 22-04-2016 APT61_RS07435 0799ddea2800bcfa26700b8d2139a599 733 SUPERFAMILY SSF52540 532 706 4.26E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07435 0799ddea2800bcfa26700b8d2139a599 733 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 513 719 6.2E-45 T 22-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 APT61_RS07435 0799ddea2800bcfa26700b8d2139a599 733 PANTHER PTHR32309 185 476 3.4E-203 T 22-04-2016 APT61_RS07435 0799ddea2800bcfa26700b8d2139a599 733 PANTHER PTHR32309 1 123 3.4E-203 T 22-04-2016 APT61_RS07435 0799ddea2800bcfa26700b8d2139a599 733 PANTHER PTHR32309 493 727 3.4E-203 T 22-04-2016 APT61_RS07435 0799ddea2800bcfa26700b8d2139a599 733 Pfam PF13807 G-rich domain on putative tyrosine kinase 368 448 2.3E-28 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain APT61_RS07435 0799ddea2800bcfa26700b8d2139a599 733 Gene3D G3DSA:3.40.50.300 532 706 9.0E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07435 0799ddea2800bcfa26700b8d2139a599 733 Pfam PF02706 Chain length determinant protein 17 251 8.2E-38 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APT61_RS07435 0799ddea2800bcfa26700b8d2139a599 733 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 541 710 6.8E-9 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APT61_RS07435 0799ddea2800bcfa26700b8d2139a599 733 PANTHER PTHR32309:SF17 185 476 3.4E-203 T 22-04-2016 APT61_RS07435 0799ddea2800bcfa26700b8d2139a599 733 PANTHER PTHR32309:SF17 1 123 3.4E-203 T 22-04-2016 APT61_RS07435 0799ddea2800bcfa26700b8d2139a599 733 PANTHER PTHR32309:SF17 493 727 3.4E-203 T 22-04-2016 APT61_RS05735 7231cc97560541f2727ca83226c04d4a 366 SUPERFAMILY SSF55315 122 199 1.29E-9 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like APT61_RS05735 7231cc97560541f2727ca83226c04d4a 366 SUPERFAMILY SSF75217 205 364 1.24E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APT61_RS05735 7231cc97560541f2727ca83226c04d4a 366 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 130 201 1.3E-11 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APT61_RS05735 7231cc97560541f2727ca83226c04d4a 366 PANTHER PTHR12029:SF57 83 364 9.5E-186 T 22-04-2016 APT61_RS05735 7231cc97560541f2727ca83226c04d4a 366 PANTHER PTHR12029:SF57 3 63 9.5E-186 T 22-04-2016 APT61_RS05735 7231cc97560541f2727ca83226c04d4a 366 SMART SM00967 129 204 5.5E-8 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APT61_RS05735 7231cc97560541f2727ca83226c04d4a 366 PANTHER PTHR12029 83 364 9.5E-186 T 22-04-2016 APT61_RS05735 7231cc97560541f2727ca83226c04d4a 366 PANTHER PTHR12029 3 63 9.5E-186 T 22-04-2016 APT61_RS05735 7231cc97560541f2727ca83226c04d4a 366 Pfam PF00588 SpoU rRNA Methylase family 219 357 3.4E-31 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APT61_RS05735 7231cc97560541f2727ca83226c04d4a 366 Gene3D G3DSA:3.40.1280.10 215 365 7.4E-41 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT61_RS05735 7231cc97560541f2727ca83226c04d4a 366 PIRSF PIRSF006280 1 366 3.3E-163 T 22-04-2016 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APT61_RS05735 7231cc97560541f2727ca83226c04d4a 366 Gene3D G3DSA:3.30.1330.30 121 198 7.1E-8 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 421 435 3.8E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.8E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 381 397 3.8E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.8E-14 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 PANTHER PTHR22594:SF6 6 180 6.0E-248 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 PANTHER PTHR22594:SF6 199 464 6.0E-248 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 460 2.3E-81 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 4.3E-12 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 Gene3D G3DSA:2.40.50.140 16 104 1.6E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 SUPERFAMILY SSF55681 97 465 8.71E-96 T 22-04-2016 APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 SUPERFAMILY SSF50249 16 101 9.0E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 6 466 45.855 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 PANTHER PTHR22594 6 180 6.0E-248 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 PANTHER PTHR22594 199 464 6.0E-248 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 Gene3D G3DSA:3.30.930.10 109 464 4.0E-111 T 22-04-2016 APT61_RS14865 4ac0fd0938c0df0430ea0043272b840b 466 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 5 466 3.1E-209 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 SUPERFAMILY SSF50621 227 354 1.64E-44 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 SMART SM01005 232 356 1.3E-61 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 Hamap MF_01201 Alanine racemase. 2 356 33.209 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 Gene3D G3DSA:2.40.37.10 208 354 5.8E-54 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 PANTHER PTHR30511 1 352 3.4E-143 T 22-04-2016 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 7.5E-66 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 SUPERFAMILY SSF51419 9 233 7.27E-65 T 22-04-2016 IPR029066 PLP-binding barrel APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 PANTHER PTHR30511:SF0 1 352 3.4E-143 T 22-04-2016 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 5.8E-37 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 TIGRFAM TIGR00492 alr: alanine racemase 4 356 4.4E-125 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 Gene3D G3DSA:3.20.20.10 11 207 4.9E-67 T 22-04-2016 IPR029066 PLP-binding barrel APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 PRINTS PR00992 Alanine racemase signature 248 263 2.7E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 PRINTS PR00992 Alanine racemase signature 265 280 2.7E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 PRINTS PR00992 Alanine racemase signature 190 217 2.7E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 PRINTS PR00992 Alanine racemase signature 338 351 2.7E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 PRINTS PR00992 Alanine racemase signature 61 79 2.7E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 PRINTS PR00992 Alanine racemase signature 286 303 2.7E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 PRINTS PR00992 Alanine racemase signature 155 166 2.7E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 PRINTS PR00992 Alanine racemase signature 27 43 2.7E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS08925 faf2628756cb66aad53c6cb71d0e764e 356 PRINTS PR00992 Alanine racemase signature 121 133 2.7E-71 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 APT61_RS12980 0606effdae0ff149347a160acccb3f7e 480 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 466 45.909 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 APT61_RS12980 0606effdae0ff149347a160acccb3f7e 480 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 2 452 1.2E-161 T 22-04-2016 IPR003846 Uncharacterised protein family UPF0061 APT61_RS12980 0606effdae0ff149347a160acccb3f7e 480 PANTHER PTHR32057 15 480 1.5E-207 T 22-04-2016 APT61_RS14760 ba4cc5fbc3717a1ff73b6ffe64eebb92 208 Gene3D G3DSA:1.10.150.20 116 202 3.3E-27 T 22-04-2016 APT61_RS14760 ba4cc5fbc3717a1ff73b6ffe64eebb92 208 PIRSF PIRSF028788 1 206 1.4E-61 T 22-04-2016 IPR026256 Transcriptional regulator, TfoX/Sxy-type APT61_RS14760 ba4cc5fbc3717a1ff73b6ffe64eebb92 208 Pfam PF04994 TfoX C-terminal domain 116 194 9.8E-25 T 22-04-2016 IPR007077 TfoX, C-terminal APT61_RS14760 ba4cc5fbc3717a1ff73b6ffe64eebb92 208 PANTHER PTHR36121:SF1 2 202 1.0E-50 T 22-04-2016 APT61_RS14760 ba4cc5fbc3717a1ff73b6ffe64eebb92 208 PANTHER PTHR36121 2 202 1.0E-50 T 22-04-2016 APT61_RS14760 ba4cc5fbc3717a1ff73b6ffe64eebb92 208 SUPERFAMILY SSF159894 13 107 7.85E-27 T 22-04-2016 APT61_RS14760 ba4cc5fbc3717a1ff73b6ffe64eebb92 208 Pfam PF04993 TfoX N-terminal domain 15 106 3.3E-26 T 22-04-2016 IPR007076 TfoX, N-terminal APT61_RS14760 ba4cc5fbc3717a1ff73b6ffe64eebb92 208 Gene3D G3DSA:3.30.1460.30 5 108 2.7E-33 T 22-04-2016 IPR007076 TfoX, N-terminal APT61_RS03055 45395513d649646c7c6b61ca3a7ca19f 258 Pfam PF07729 FCD domain 96 219 2.6E-18 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS03055 45395513d649646c7c6b61ca3a7ca19f 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 3.5E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS03055 45395513d649646c7c6b61ca3a7ca19f 258 PANTHER PTHR11751:SF421 1 112 1.4E-56 T 22-04-2016 APT61_RS03055 45395513d649646c7c6b61ca3a7ca19f 258 SMART SM00345 13 72 1.0E-24 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS03055 45395513d649646c7c6b61ca3a7ca19f 258 Gene3D G3DSA:1.20.120.530 95 226 1.1E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS03055 45395513d649646c7c6b61ca3a7ca19f 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.6E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS03055 45395513d649646c7c6b61ca3a7ca19f 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.6E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS03055 45395513d649646c7c6b61ca3a7ca19f 258 SUPERFAMILY SSF46785 2 76 2.04E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03055 45395513d649646c7c6b61ca3a7ca19f 258 PANTHER PTHR11751 1 112 1.4E-56 T 22-04-2016 APT61_RS03055 45395513d649646c7c6b61ca3a7ca19f 258 SUPERFAMILY SSF48008 94 226 8.11E-22 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS03055 45395513d649646c7c6b61ca3a7ca19f 258 Gene3D G3DSA:1.10.10.10 4 74 3.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03055 45395513d649646c7c6b61ca3a7ca19f 258 SMART SM00895 96 220 9.1E-15 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 PANTHER PTHR10947 2 794 0.0 T 22-04-2016 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 Gene3D G3DSA:3.30.70.380 703 794 4.9E-31 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 Pfam PF03483 B3/4 domain 212 385 4.1E-70 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 1.4E-294 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 Pfam PF03484 tRNA synthetase B5 domain 405 471 5.9E-20 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 PANTHER PTHR10947:SF0 2 794 0.0 T 22-04-2016 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 Gene3D G3DSA:2.40.50.140 42 154 1.4E-45 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 SMART SM00874 403 471 5.6E-32 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 48.998 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 SMART SM00896 701 794 7.7E-46 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 SUPERFAMILY SSF46955 403 475 6.13E-21 T 22-04-2016 IPR009061 Putative DNA-binding domain APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 SUPERFAMILY SSF55681 467 689 3.28E-55 T 22-04-2016 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 Pfam PF01588 Putative tRNA binding domain 45 145 1.3E-27 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 Gene3D G3DSA:3.30.930.10 496 690 9.7E-67 T 22-04-2016 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 SUPERFAMILY SSF54991 696 794 7.72E-31 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 Gene3D G3DSA:3.50.40.10 197 392 1.4E-85 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 SUPERFAMILY SSF56037 195 394 1.33E-77 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 Gene3D G3DSA:3.30.56.10 155 184 1.2E-28 T 22-04-2016 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 Gene3D G3DSA:3.30.56.10 1 38 1.2E-28 T 22-04-2016 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 SUPERFAMILY SSF50249 35 196 4.41E-51 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 SMART SM00873 212 385 7.9E-99 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 Gene3D G3DSA:3.30.56.20 402 475 4.3E-29 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 APT61_RS13015 0fa6b1c0a6a327907686b07fa14353f1 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 2.9E-28 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 APT61_RS18205 e25166c82adaa9ac4ce44b9ec58bbac3 151 PANTHER PTHR30272 1 151 9.7E-90 T 22-04-2016 APT61_RS18205 e25166c82adaa9ac4ce44b9ec58bbac3 151 SUPERFAMILY SSF54637 7 146 1.91E-51 T 22-04-2016 IPR029069 HotDog domain APT61_RS18205 e25166c82adaa9ac4ce44b9ec58bbac3 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 8.3E-61 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APT61_RS18205 e25166c82adaa9ac4ce44b9ec58bbac3 151 Gene3D G3DSA:3.10.129.10 4 147 2.0E-59 T 22-04-2016 IPR029069 HotDog domain APT61_RS18205 e25166c82adaa9ac4ce44b9ec58bbac3 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.822 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APT61_RS18205 e25166c82adaa9ac4ce44b9ec58bbac3 151 Pfam PF07977 FabA-like domain 17 141 5.9E-41 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APT61_RS20520 e37307141cc9efd2504eb436c9a71740 569 Pfam PF13899 Thioredoxin-like 466 541 4.6E-13 T 22-04-2016 APT61_RS20520 e37307141cc9efd2504eb436c9a71740 569 Pfam PF11412 Disulphide bond corrector protein DsbC 29 137 2.0E-34 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APT61_RS20520 e37307141cc9efd2504eb436c9a71740 569 ProSitePatterns PS00194 Thioredoxin family active site. 476 494 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APT61_RS20520 e37307141cc9efd2504eb436c9a71740 569 PANTHER PTHR32234 1 568 1.1E-241 T 22-04-2016 APT61_RS20520 e37307141cc9efd2504eb436c9a71740 569 PANTHER PTHR32234:SF0 1 568 1.1E-241 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 APT61_RS20520 e37307141cc9efd2504eb436c9a71740 569 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 568 40.455 T 22-04-2016 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 APT61_RS20520 e37307141cc9efd2504eb436c9a71740 569 Gene3D G3DSA:2.60.40.1250 24 142 1.5E-45 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APT61_RS20520 e37307141cc9efd2504eb436c9a71740 569 SUPERFAMILY SSF52833 448 565 9.85E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS20520 e37307141cc9efd2504eb436c9a71740 569 Gene3D G3DSA:3.40.30.10 457 565 2.2E-35 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS20520 e37307141cc9efd2504eb436c9a71740 569 SUPERFAMILY SSF74863 27 140 8.63E-40 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APT61_RS20520 e37307141cc9efd2504eb436c9a71740 569 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 176 381 3.4E-20 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 APT61_RS14900 7b5852373988985e20eb6644fa3d0ee1 234 Pfam PF04288 MukE-like family 10 229 5.3E-126 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 APT61_RS14900 7b5852373988985e20eb6644fa3d0ee1 234 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 234 48.682 T 22-04-2016 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 APT61_RS06210 0ef8411076612eaf681a299acb7a1e23 666 Gene3D G3DSA:3.40.630.30 371 409 2.1E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS06210 0ef8411076612eaf681a299acb7a1e23 666 Gene3D G3DSA:3.40.630.30 445 508 2.1E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS06210 0ef8411076612eaf681a299acb7a1e23 666 SUPERFAMILY SSF55729 365 414 9.68E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS06210 0ef8411076612eaf681a299acb7a1e23 666 SUPERFAMILY SSF55729 450 508 9.68E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS06210 0ef8411076612eaf681a299acb7a1e23 666 Gene3D G3DSA:3.40.50.300 164 281 9.5E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS06210 0ef8411076612eaf681a299acb7a1e23 666 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 14 646 47.6 T 22-04-2016 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 APT61_RS06210 0ef8411076612eaf681a299acb7a1e23 666 Pfam PF17176 tRNA-binding domain 532 649 3.1E-34 T 22-04-2016 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 APT61_RS06210 0ef8411076612eaf681a299acb7a1e23 666 PANTHER PTHR10925:SF6 16 600 1.1E-249 T 22-04-2016 APT61_RS06210 0ef8411076612eaf681a299acb7a1e23 666 PANTHER PTHR10925 16 600 1.1E-249 T 22-04-2016 IPR032672 TmcA/NAT10/Kre33 GO:0008080 APT61_RS06210 0ef8411076612eaf681a299acb7a1e23 666 Pfam PF08351 Domain of unknown function (DUF1726) 62 147 9.0E-7 T 22-04-2016 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal APT61_RS06210 0ef8411076612eaf681a299acb7a1e23 666 SUPERFAMILY SSF52540 168 281 2.12E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS06210 0ef8411076612eaf681a299acb7a1e23 666 Pfam PF13718 GNAT acetyltransferase 2 366 477 3.2E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS06210 0ef8411076612eaf681a299acb7a1e23 666 Pfam PF05127 Helicase 235 333 7.1E-32 T 22-04-2016 IPR007807 Helicase domain APT61_RS06210 0ef8411076612eaf681a299acb7a1e23 666 Pfam PF05127 Helicase 193 232 1.3E-5 T 22-04-2016 IPR007807 Helicase domain APT61_RS14195 8f24c3ab8a097c991b3eaa75b8b5fed5 842 PANTHER PTHR10587 467 745 4.1E-161 T 22-04-2016 APT61_RS14195 8f24c3ab8a097c991b3eaa75b8b5fed5 842 PANTHER PTHR10587 149 418 4.1E-161 T 22-04-2016 APT61_RS14195 8f24c3ab8a097c991b3eaa75b8b5fed5 842 Gene3D G3DSA:3.90.550.10 339 389 4.7E-4 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS14195 8f24c3ab8a097c991b3eaa75b8b5fed5 842 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 64 745 52.054 T 22-04-2016 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 UniPathway: UPA00637 APT61_RS14195 8f24c3ab8a097c991b3eaa75b8b5fed5 842 SUPERFAMILY SSF53448 244 532 5.81E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS14195 8f24c3ab8a097c991b3eaa75b8b5fed5 842 Pfam PF00535 Glycosyl transferase family 2 246 428 1.0E-22 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APT61_RS14195 8f24c3ab8a097c991b3eaa75b8b5fed5 842 PANTHER PTHR10587:SF63 467 745 4.1E-161 T 22-04-2016 APT61_RS14195 8f24c3ab8a097c991b3eaa75b8b5fed5 842 PANTHER PTHR10587:SF63 149 418 4.1E-161 T 22-04-2016 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 PANTHER PTHR23115:SF66 1 184 0.0 T 22-04-2016 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 PANTHER PTHR23115:SF66 308 697 0.0 T 22-04-2016 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 PANTHER PTHR23115:SF66 261 289 0.0 T 22-04-2016 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 Gene3D G3DSA:3.30.230.10 489 604 7.0E-50 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 Pfam PF03764 Elongation factor G, domain IV 484 603 2.4E-48 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 107.455 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 PANTHER PTHR23115 1 184 0.0 T 22-04-2016 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 PANTHER PTHR23115 308 697 0.0 T 22-04-2016 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 PANTHER PTHR23115 261 289 0.0 T 22-04-2016 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 Gene3D G3DSA:3.30.70.870 410 485 5.8E-38 T 22-04-2016 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 Gene3D G3DSA:3.40.50.300 7 293 2.3E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 SUPERFAMILY SSF52540 6 288 2.1E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 Gene3D G3DSA:3.30.70.240 605 688 2.9E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 4.8E-66 T 22-04-2016 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 SUPERFAMILY SSF54980 407 485 1.12E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 SMART SM00838 606 693 2.9E-53 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 Pfam PF00679 Elongation factor G C-terminus 606 691 1.5E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 SMART SM00889 485 604 1.4E-72 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 Gene3D G3DSA:2.40.30.10 310 409 1.0E-37 T 22-04-2016 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 SUPERFAMILY SSF54211 484 605 2.78E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 Pfam PF14492 Elongation Factor G, domain II 409 482 9.1E-35 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 697 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 4.1E-30 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 SUPERFAMILY SSF50447 271 409 6.41E-36 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 SUPERFAMILY SSF54980 606 696 1.01E-28 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APT61_RS10945 6d6dce5e08c615334929e6e20bb99120 700 Pfam PF03144 Elongation factor Tu domain 2 329 396 4.4E-16 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APT61_RS13760 bd46e7971927f6d3b5b917613c1e7356 109 Gene3D G3DSA:1.10.10.10 3 80 9.7E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS13760 bd46e7971927f6d3b5b917613c1e7356 109 SUPERFAMILY SSF46785 8 100 5.92E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS13760 bd46e7971927f6d3b5b917613c1e7356 109 PANTHER PTHR33221:SF1 7 78 3.2E-15 T 22-04-2016 APT61_RS13760 bd46e7971927f6d3b5b917613c1e7356 109 PANTHER PTHR33221 7 78 3.2E-15 T 22-04-2016 APT61_RS13760 bd46e7971927f6d3b5b917613c1e7356 109 Pfam PF02082 Transcriptional regulator 2 78 1.2E-14 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type APT61_RS18840 9d0c96e096a3cb63aac918673bd08ef5 500 PIRSF PIRSF001478 1 500 3.3E-258 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 APT61_RS18840 9d0c96e096a3cb63aac918673bd08ef5 500 Pfam PF02610 L-arabinose isomerase 5 359 1.8E-179 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 APT61_RS18840 9d0c96e096a3cb63aac918673bd08ef5 500 PANTHER PTHR38464:SF1 2 500 5.5E-240 T 22-04-2016 APT61_RS18840 9d0c96e096a3cb63aac918673bd08ef5 500 SUPERFAMILY SSF53743 1 326 1.02E-124 T 22-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 APT61_RS18840 9d0c96e096a3cb63aac918673bd08ef5 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 3.9E-46 T 22-04-2016 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4|UniPathway: UPA00145 APT61_RS18840 9d0c96e096a3cb63aac918673bd08ef5 500 PANTHER PTHR38464 2 500 5.5E-240 T 22-04-2016 APT61_RS18840 9d0c96e096a3cb63aac918673bd08ef5 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 303 6.0E-170 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 APT61_RS18840 9d0c96e096a3cb63aac918673bd08ef5 500 SUPERFAMILY SSF50443 329 496 8.11E-71 T 22-04-2016 IPR004216 L-fucose/L-arabinose isomerase, C-terminal APT61_RS18840 9d0c96e096a3cb63aac918673bd08ef5 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.981 T 22-04-2016 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4|UniPathway: UPA00145 APT61_RS02345 a85317db57c321fe205e470346c5aa58 321 Gene3D G3DSA:3.20.20.70 7 244 4.8E-82 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS02345 a85317db57c321fe205e470346c5aa58 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APT61_RS02345 a85317db57c321fe205e470346c5aa58 321 PANTHER PTHR11082:SF25 1 318 1.9E-150 T 22-04-2016 APT61_RS02345 a85317db57c321fe205e470346c5aa58 321 Gene3D G3DSA:1.10.1200.80 252 320 1.4E-16 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 APT61_RS02345 a85317db57c321fe205e470346c5aa58 321 PANTHER PTHR11082 1 318 1.9E-150 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APT61_RS02345 a85317db57c321fe205e470346c5aa58 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 6.6E-116 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APT61_RS02345 a85317db57c321fe205e470346c5aa58 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 319 9.7E-140 T 22-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 APT61_RS02345 a85317db57c321fe205e470346c5aa58 321 SUPERFAMILY SSF51395 10 319 1.1E-86 T 22-04-2016 APT61_RS02345 a85317db57c321fe205e470346c5aa58 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.116 T 22-04-2016 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 APT61_RS02345 a85317db57c321fe205e470346c5aa58 321 PIRSF PIRSF006621 1 321 2.2E-100 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APT61_RS18225 7b0a5380409288b10be4305e22f51981 450 Pfam PF02163 Peptidase family M50 10 438 1.2E-86 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 APT61_RS18225 7b0a5380409288b10be4305e22f51981 450 PANTHER PTHR22939 35 450 9.8E-105 T 22-04-2016 APT61_RS18225 7b0a5380409288b10be4305e22f51981 450 PANTHER PTHR22939:SF78 35 450 9.8E-105 T 22-04-2016 APT61_RS18225 7b0a5380409288b10be4305e22f51981 450 SUPERFAMILY SSF50156 87 183 6.57E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS18225 7b0a5380409288b10be4305e22f51981 450 Gene3D G3DSA:2.30.42.10 96 181 1.3E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS18225 7b0a5380409288b10be4305e22f51981 450 Pfam PF13180 PDZ domain 212 286 3.2E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS18225 7b0a5380409288b10be4305e22f51981 450 SMART SM00228 211 280 2.9E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS18225 7b0a5380409288b10be4305e22f51981 450 SMART SM00228 115 186 0.0058 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS18225 7b0a5380409288b10be4305e22f51981 450 Gene3D G3DSA:2.30.42.10 207 295 5.3E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS18225 7b0a5380409288b10be4305e22f51981 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 450 4.9E-167 T 22-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 APT61_RS18225 7b0a5380409288b10be4305e22f51981 450 SUPERFAMILY SSF50156 195 292 1.97E-17 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 SUPERFAMILY SSF81271 280 360 6.76E-36 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 SUPERFAMILY SSF52540 3 302 1.52E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 PIRSF PIRSF006641 1 364 6.5E-158 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 Pfam PF06071 Protein of unknown function (DUF933) 280 363 2.2E-39 T 22-04-2016 IPR013029 Domain of unknown function DUF933 APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 Gene3D G3DSA:1.10.150.300 131 201 6.2E-26 T 22-04-2016 IPR023192 TGS-like domain APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 Gene3D G3DSA:3.40.50.300 4 130 5.6E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 Gene3D G3DSA:3.40.50.300 202 268 5.6E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.9E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 PANTHER PTHR23305 1 364 1.4E-210 T 22-04-2016 APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 Gene3D G3DSA:3.10.20.30 269 364 8.3E-50 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 364 46.185 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.4E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS09145 37ca3cd53af4f19bc04afacd673e084b 364 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 364 1.1E-174 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 APT61_RS17775 ef8131f73c39f977c25174aeac204999 465 Pfam PF00324 Amino acid permease 17 452 2.7E-113 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APT61_RS17775 ef8131f73c39f977c25174aeac204999 465 PANTHER PTHR11785:SF399 2 465 5.9E-297 T 22-04-2016 APT61_RS17775 ef8131f73c39f977c25174aeac204999 465 ProSitePatterns PS00218 Amino acid permeases signature. 42 73 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APT61_RS17775 ef8131f73c39f977c25174aeac204999 465 PANTHER PTHR11785 2 465 5.9E-297 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS17775 ef8131f73c39f977c25174aeac204999 465 PIRSF PIRSF006060 1 465 2.6E-88 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS02820 a5586aac15baa857a1605734931c715c 133 PANTHER PTHR33515 1 133 1.5E-54 T 22-04-2016 APT61_RS02820 a5586aac15baa857a1605734931c715c 133 Gene3D G3DSA:3.30.300.20 1 107 1.0E-38 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APT61_RS02820 a5586aac15baa857a1605734931c715c 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 120 23.143 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APT61_RS02820 a5586aac15baa857a1605734931c715c 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 8.0E-45 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APT61_RS02820 a5586aac15baa857a1605734931c715c 133 SUPERFAMILY SSF89919 2 107 1.7E-35 T 22-04-2016 IPR023799 Ribosome-binding factor A domain APT61_RS02820 a5586aac15baa857a1605734931c715c 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 118 3.7E-44 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APT61_RS02820 a5586aac15baa857a1605734931c715c 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 APT61_RS02820 a5586aac15baa857a1605734931c715c 133 Pfam PF02033 Ribosome-binding factor A 7 112 5.6E-32 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 APT61_RS08480 2848309e4680ac06e622f488cd3ab512 214 PANTHER PTHR22617:SF32 16 214 3.0E-136 T 22-04-2016 APT61_RS08480 2848309e4680ac06e622f488cd3ab512 214 Gene3D G3DSA:1.10.287.500 35 167 4.4E-57 T 22-04-2016 APT61_RS08480 2848309e4680ac06e622f488cd3ab512 214 Pfam PF04344 Chemotaxis phosphatase, CheZ 17 214 2.8E-77 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- APT61_RS08480 2848309e4680ac06e622f488cd3ab512 214 SUPERFAMILY SSF75708 11 213 2.75E-68 T 22-04-2016 APT61_RS08480 2848309e4680ac06e622f488cd3ab512 214 PIRSF PIRSF002884 2 214 8.8E-88 T 22-04-2016 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- APT61_RS08480 2848309e4680ac06e622f488cd3ab512 214 Gene3D G3DSA:1.20.5.590 1 34 2.3E-22 T 22-04-2016 APT61_RS08480 2848309e4680ac06e622f488cd3ab512 214 PANTHER PTHR22617 16 214 3.0E-136 T 22-04-2016 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 153 179 2.8E-38 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 101 120 2.8E-38 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 14 36 2.8E-38 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 195 207 2.8E-38 T 22-04-2016 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 208 222 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 35 55 3.3E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 127 150 3.3E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 57 73 3.3E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 174 195 3.3E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 78 94 3.3E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 205 229 3.3E-60 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 Gene3D G3DSA:3.40.190.80 150 257 2.7E-39 T 22-04-2016 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 SUPERFAMILY SSF56655 1 256 3.14E-85 T 22-04-2016 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 Pfam PF00459 Inositol monophosphatase family 2 257 3.5E-74 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 PANTHER PTHR20854 1 264 1.1E-109 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 78 91 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 PANTHER PTHR20854:SF4 1 264 1.1E-109 T 22-04-2016 APT61_RS05910 ad5bb28b40e83b89a8d7eb803fbab348 264 Gene3D G3DSA:3.30.540.10 1 149 7.6E-53 T 22-04-2016 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 Gene3D G3DSA:3.40.50.170 86 277 2.0E-56 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 PANTHER PTHR10520 13 274 5.8E-139 T 22-04-2016 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 SUPERFAMILY SSF53328 86 279 1.03E-59 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 Gene3D G3DSA:3.30.70.260 4 70 2.3E-12 T 22-04-2016 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 PANTHER PTHR10520:SF7 13 274 5.8E-139 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 Pfam PF01842 ACT domain 8 67 9.5E-8 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 280 1.6E-130 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 Pfam PF00551 Formyl transferase 86 262 2.6E-53 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 254 279 6.0E-70 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 86 108 6.0E-70 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 232 254 6.0E-70 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 6.0E-70 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 6.0E-70 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 108 135 6.0E-70 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 SUPERFAMILY SSF55021 6 56 4.58E-9 T 22-04-2016 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 280 45.875 T 22-04-2016 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00074 APT61_RS09355 a8dec54f9b55c5c2480174a075c34ba8 280 PIRSF PIRSF036480 4 280 8.3E-113 T 22-04-2016 APT61_RS15200 8a6c116a6efaaa8d02b36d13eaa6e59c 124 SUPERFAMILY SSF54523 41 116 1.57E-16 T 22-04-2016 APT61_RS15200 8a6c116a6efaaa8d02b36d13eaa6e59c 124 Pfam PF13633 Prokaryotic N-terminal methylation site 6 31 5.9E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS15200 8a6c116a6efaaa8d02b36d13eaa6e59c 124 Pfam PF02501 Type II secretion system (T2SS), protein I 42 116 1.9E-17 T 22-04-2016 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 APT61_RS15200 8a6c116a6efaaa8d02b36d13eaa6e59c 124 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS15200 8a6c116a6efaaa8d02b36d13eaa6e59c 124 PANTHER PTHR38779:SF2 4 123 1.3E-25 T 22-04-2016 APT61_RS15200 8a6c116a6efaaa8d02b36d13eaa6e59c 124 Gene3D G3DSA:3.30.1300.30 36 116 3.9E-20 T 22-04-2016 APT61_RS15200 8a6c116a6efaaa8d02b36d13eaa6e59c 124 TIGRFAM TIGR01707 gspI: type II secretion system protein I 8 102 3.8E-24 T 22-04-2016 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 APT61_RS15200 8a6c116a6efaaa8d02b36d13eaa6e59c 124 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 4.3E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS15200 8a6c116a6efaaa8d02b36d13eaa6e59c 124 PANTHER PTHR38779 4 123 1.3E-25 T 22-04-2016 APT61_RS18650 b50aad5e710b5b3f695706516175f4a7 313 Pfam PF01795 MraW methylase family 5 310 4.1E-121 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS18650 b50aad5e710b5b3f695706516175f4a7 313 SUPERFAMILY SSF53335 7 113 7.59E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS18650 b50aad5e710b5b3f695706516175f4a7 313 SUPERFAMILY SSF53335 213 310 7.59E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS18650 b50aad5e710b5b3f695706516175f4a7 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 1 310 3.2E-133 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS18650 b50aad5e710b5b3f695706516175f4a7 313 PANTHER PTHR11265 1 313 2.7E-158 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS18650 b50aad5e710b5b3f695706516175f4a7 313 SUPERFAMILY SSF81799 114 213 9.68E-35 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS18650 b50aad5e710b5b3f695706516175f4a7 313 PIRSF PIRSF004486 1 312 3.3E-102 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS18650 b50aad5e710b5b3f695706516175f4a7 313 Gene3D G3DSA:3.40.50.150 216 311 9.9E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS18650 b50aad5e710b5b3f695706516175f4a7 313 Gene3D G3DSA:3.40.50.150 7 110 9.9E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS18650 b50aad5e710b5b3f695706516175f4a7 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 39.007 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS18650 b50aad5e710b5b3f695706516175f4a7 313 PANTHER PTHR11265:SF0 1 313 2.7E-158 T 22-04-2016 APT61_RS18650 b50aad5e710b5b3f695706516175f4a7 313 Gene3D G3DSA:1.10.150.170 112 215 1.1E-37 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS20350 3ba2ea54cec3bb4cf66278da4803309d 615 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 120 2.2E-12 T 22-04-2016 APT61_RS20350 3ba2ea54cec3bb4cf66278da4803309d 615 SUPERFAMILY SSF55874 1 200 7.99E-57 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS20350 3ba2ea54cec3bb4cf66278da4803309d 615 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 311 2.1E-105 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 APT61_RS20350 3ba2ea54cec3bb4cf66278da4803309d 615 SMART SM01340 212 331 7.5E-52 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APT61_RS20350 3ba2ea54cec3bb4cf66278da4803309d 615 SMART SM00853 438 581 6.2E-16 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APT61_RS20350 3ba2ea54cec3bb4cf66278da4803309d 615 Pfam PF08676 MutL C terminal dimerisation domain 435 566 9.3E-26 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 APT61_RS20350 3ba2ea54cec3bb4cf66278da4803309d 615 SUPERFAMILY SSF54211 191 331 2.05E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS20350 3ba2ea54cec3bb4cf66278da4803309d 615 Gene3D G3DSA:3.30.565.10 2 203 1.1E-77 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS20350 3ba2ea54cec3bb4cf66278da4803309d 615 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 612 25.358 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 APT61_RS20350 3ba2ea54cec3bb4cf66278da4803309d 615 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site APT61_RS20350 3ba2ea54cec3bb4cf66278da4803309d 615 Gene3D G3DSA:3.30.230.10 219 329 3.1E-37 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS20350 3ba2ea54cec3bb4cf66278da4803309d 615 SUPERFAMILY SSF118116 434 613 6.02E-41 T 22-04-2016 APT61_RS20350 3ba2ea54cec3bb4cf66278da4803309d 615 PANTHER PTHR10073 3 360 2.4E-157 T 22-04-2016 APT61_RS20350 3ba2ea54cec3bb4cf66278da4803309d 615 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 330 5.9E-35 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 APT61_RS20750 7d8d5dd7e0dca7c8279cb40917c7ee1c 336 Pfam PF00294 pfkB family carbohydrate kinase 29 320 2.8E-36 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APT61_RS20750 7d8d5dd7e0dca7c8279cb40917c7ee1c 336 SUPERFAMILY SSF53613 5 330 3.9E-54 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS20750 7d8d5dd7e0dca7c8279cb40917c7ee1c 336 PANTHER PTHR10584 1 332 4.6E-66 T 22-04-2016 APT61_RS20750 7d8d5dd7e0dca7c8279cb40917c7ee1c 336 PANTHER PTHR10584:SF166 1 332 4.6E-66 T 22-04-2016 APT61_RS20750 7d8d5dd7e0dca7c8279cb40917c7ee1c 336 Gene3D G3DSA:3.40.1190.20 2 333 7.9E-61 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS02705 b3e61d7554e0de536baae20f3afa4031 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 406 4.0E-132 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APT61_RS02705 b3e61d7554e0de536baae20f3afa4031 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 5.0E-185 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS02705 b3e61d7554e0de536baae20f3afa4031 419 SUPERFAMILY SSF55205 1 418 6.38E-147 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APT61_RS02705 b3e61d7554e0de536baae20f3afa4031 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 46.862 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS02705 b3e61d7554e0de536baae20f3afa4031 419 Gene3D G3DSA:3.65.10.10 21 219 1.5E-68 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APT61_RS02705 b3e61d7554e0de536baae20f3afa4031 419 PANTHER PTHR21090 1 419 2.0E-226 T 22-04-2016 APT61_RS02705 b3e61d7554e0de536baae20f3afa4031 419 Gene3D G3DSA:3.65.10.10 220 416 9.0E-63 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APT61_RS01665 bdb1d6c617b68e5f1715ee2773ca43d1 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 5.0E-23 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS01665 bdb1d6c617b68e5f1715ee2773ca43d1 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 9.5E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS01665 bdb1d6c617b68e5f1715ee2773ca43d1 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 9.5E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS01665 bdb1d6c617b68e5f1715ee2773ca43d1 252 SUPERFAMILY SSF46785 3 75 2.15E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01665 bdb1d6c617b68e5f1715ee2773ca43d1 252 PANTHER PTHR30363 1 252 4.8E-123 T 22-04-2016 APT61_RS01665 bdb1d6c617b68e5f1715ee2773ca43d1 252 Gene3D G3DSA:1.10.10.10 1 58 3.2E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01665 bdb1d6c617b68e5f1715ee2773ca43d1 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APT61_RS01665 bdb1d6c617b68e5f1715ee2773ca43d1 252 SMART SM01134 72 233 4.2E-71 T 22-04-2016 APT61_RS01665 bdb1d6c617b68e5f1715ee2773ca43d1 252 SUPERFAMILY SSF100950 73 234 5.33E-31 T 22-04-2016 APT61_RS01665 bdb1d6c617b68e5f1715ee2773ca43d1 252 Gene3D G3DSA:3.30.750.70 73 153 2.8E-17 T 22-04-2016 APT61_RS01665 bdb1d6c617b68e5f1715ee2773ca43d1 252 SMART SM00420 6 58 2.3E-24 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS01665 bdb1d6c617b68e5f1715ee2773ca43d1 252 PANTHER PTHR30363:SF1 1 252 4.8E-123 T 22-04-2016 APT61_RS01665 bdb1d6c617b68e5f1715ee2773ca43d1 252 Pfam PF00455 DeoR C terminal sensor domain 74 231 3.5E-55 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APT61_RS12945 7e823b12e9304218b86699b02c1823da 348 Pfam PF00793 DAHP synthetase I family 39 336 9.3E-106 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APT61_RS12945 7e823b12e9304218b86699b02c1823da 348 SUPERFAMILY SSF51569 7 347 3.3E-131 T 22-04-2016 APT61_RS12945 7e823b12e9304218b86699b02c1823da 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 5.6E-174 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APT61_RS12945 7e823b12e9304218b86699b02c1823da 348 PANTHER PTHR21225 1 348 2.3E-275 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APT61_RS12945 7e823b12e9304218b86699b02c1823da 348 PIRSF PIRSF001361 1 348 3.9E-158 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APT61_RS12945 7e823b12e9304218b86699b02c1823da 348 Gene3D G3DSA:3.20.20.70 8 347 6.6E-148 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS12945 7e823b12e9304218b86699b02c1823da 348 PANTHER PTHR21225:SF6 1 348 2.3E-275 T 22-04-2016 APT61_RS18430 e228ba4fa962432152bbe72a0f2a1a21 178 Pfam PF00156 Phosphoribosyl transferase domain 13 160 8.0E-25 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APT61_RS18430 e228ba4fa962432152bbe72a0f2a1a21 178 PANTHER PTHR22573 1 171 5.7E-81 T 22-04-2016 APT61_RS18430 e228ba4fa962432152bbe72a0f2a1a21 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 8.3E-74 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 APT61_RS18430 e228ba4fa962432152bbe72a0f2a1a21 178 SUPERFAMILY SSF53271 3 174 3.54E-54 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS18430 e228ba4fa962432152bbe72a0f2a1a21 178 Gene3D G3DSA:3.40.50.2020 2 173 2.6E-79 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS18430 e228ba4fa962432152bbe72a0f2a1a21 178 PANTHER PTHR22573:SF56 1 171 5.7E-81 T 22-04-2016 APT61_RS07165 4a811bc97fb8ca3fb60e37c8b6c014aa 488 SUPERFAMILY SSF48179 283 484 1.77E-66 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS07165 4a811bc97fb8ca3fb60e37c8b6c014aa 488 Gene3D G3DSA:3.40.50.720 7 281 4.9E-112 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07165 4a811bc97fb8ca3fb60e37c8b6c014aa 488 PANTHER PTHR30562:SF7 13 482 0.0 T 22-04-2016 APT61_RS07165 4a811bc97fb8ca3fb60e37c8b6c014aa 488 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 462 3.7E-99 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APT61_RS07165 4a811bc97fb8ca3fb60e37c8b6c014aa 488 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS07165 4a811bc97fb8ca3fb60e37c8b6c014aa 488 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 7.5E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS07165 4a811bc97fb8ca3fb60e37c8b6c014aa 488 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 7.5E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS07165 4a811bc97fb8ca3fb60e37c8b6c014aa 488 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 7.5E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS07165 4a811bc97fb8ca3fb60e37c8b6c014aa 488 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 7.5E-22 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS07165 4a811bc97fb8ca3fb60e37c8b6c014aa 488 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 3.2E-49 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APT61_RS07165 4a811bc97fb8ca3fb60e37c8b6c014aa 488 SUPERFAMILY SSF51735 6 281 2.99E-97 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07165 4a811bc97fb8ca3fb60e37c8b6c014aa 488 Gene3D G3DSA:1.10.1040.10 282 484 3.3E-75 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS07165 4a811bc97fb8ca3fb60e37c8b6c014aa 488 PANTHER PTHR30562 13 482 0.0 T 22-04-2016 APT61_RS03490 993c52db92c526e773db64db36595353 104 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 102 3.0E-43 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03490 993c52db92c526e773db64db36595353 104 Pfam PF00699 Urease beta subunit 3 99 2.7E-43 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03490 993c52db92c526e773db64db36595353 104 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 29.797 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03490 993c52db92c526e773db64db36595353 104 PANTHER PTHR33569:SF1 1 104 5.2E-54 T 22-04-2016 APT61_RS03490 993c52db92c526e773db64db36595353 104 SUPERFAMILY SSF51278 1 103 1.57E-45 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03490 993c52db92c526e773db64db36595353 104 PANTHER PTHR33569 1 104 5.2E-54 T 22-04-2016 APT61_RS03490 993c52db92c526e773db64db36595353 104 Gene3D G3DSA:2.10.150.10 1 102 1.3E-48 T 22-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS15525 aaf9b2a3a957e59e5de776601c916b83 246 PIRSF PIRSF005426 1 245 6.6E-73 T 22-04-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 APT61_RS15525 aaf9b2a3a957e59e5de776601c916b83 246 SUPERFAMILY SSF55469 1 244 2.75E-59 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APT61_RS15525 aaf9b2a3a957e59e5de776601c916b83 246 PANTHER PTHR23026 1 190 1.1E-55 T 22-04-2016 APT61_RS15525 aaf9b2a3a957e59e5de776601c916b83 246 Gene3D G3DSA:3.40.109.10 1 243 8.9E-60 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APT61_RS15525 aaf9b2a3a957e59e5de776601c916b83 246 Pfam PF00881 Nitroreductase family 12 164 2.6E-20 T 22-04-2016 IPR029479 Nitroreductase APT61_RS15525 aaf9b2a3a957e59e5de776601c916b83 246 PANTHER PTHR23026:SF109 1 190 1.1E-55 T 22-04-2016 APT61_RS03645 282bd3e697af12ab5ebdaa233b7c5bae 395 PANTHER PTHR36845 56 395 1.8E-62 T 22-04-2016 APT61_RS03645 282bd3e697af12ab5ebdaa233b7c5bae 395 PANTHER PTHR36845:SF1 56 395 1.8E-62 T 22-04-2016 APT61_RS03645 282bd3e697af12ab5ebdaa233b7c5bae 395 Pfam PF07470 Glycosyl Hydrolase Family 88 60 387 5.3E-30 T 22-04-2016 IPR010905 Glycosyl hydrolase, family 88 APT61_RS03645 282bd3e697af12ab5ebdaa233b7c5bae 395 SUPERFAMILY SSF48208 27 395 7.29E-116 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APT61_RS03645 282bd3e697af12ab5ebdaa233b7c5bae 395 Gene3D G3DSA:1.50.10.10 34 395 3.1E-134 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APT61_RS18530 e2ccf75385ec5e7098145145f570ffba 150 SUPERFAMILY SSF54523 7 115 2.88E-22 T 22-04-2016 APT61_RS18530 e2ccf75385ec5e7098145145f570ffba 150 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS18530 e2ccf75385ec5e7098145145f570ffba 150 Pfam PF00114 Pilin (bacterial filament) 36 121 1.5E-5 T 22-04-2016 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 APT61_RS18530 e2ccf75385ec5e7098145145f570ffba 150 PANTHER PTHR30093 3 87 7.7E-26 T 22-04-2016 APT61_RS18530 e2ccf75385ec5e7098145145f570ffba 150 Gene3D G3DSA:3.30.700.10 7 133 3.4E-33 T 22-04-2016 APT61_RS18530 e2ccf75385ec5e7098145145f570ffba 150 Pfam PF13633 Prokaryotic N-terminal methylation site 4 30 1.0E-10 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS18530 e2ccf75385ec5e7098145145f570ffba 150 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 3.7E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS10230 f3903c9a3c76d7c2abbabef9f6477467 60 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 4.7E-9 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat APT61_RS10230 f3903c9a3c76d7c2abbabef9f6477467 60 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 51 5.7E-9 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat APT61_RS10230 f3903c9a3c76d7c2abbabef9f6477467 60 PANTHER PTHR36569:SF1 1 54 6.7E-30 T 22-04-2016 APT61_RS10230 f3903c9a3c76d7c2abbabef9f6477467 60 PANTHER PTHR36569 1 54 6.7E-30 T 22-04-2016 APT61_RS10010 a55b7255c164b48d1bcce82728a68951 499 Gene3D G3DSA:3.40.309.10 286 470 3.5E-61 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS10010 a55b7255c164b48d1bcce82728a68951 499 Gene3D G3DSA:3.40.605.10 19 285 2.4E-96 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS10010 a55b7255c164b48d1bcce82728a68951 499 PANTHER PTHR11699:SF46 1 499 4.3E-228 T 22-04-2016 APT61_RS10010 a55b7255c164b48d1bcce82728a68951 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 299 310 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APT61_RS10010 a55b7255c164b48d1bcce82728a68951 499 Pfam PF00171 Aldehyde dehydrogenase family 32 495 8.9E-162 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS10010 a55b7255c164b48d1bcce82728a68951 499 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 271 278 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APT61_RS10010 a55b7255c164b48d1bcce82728a68951 499 SUPERFAMILY SSF53720 10 498 1.07E-159 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS10010 a55b7255c164b48d1bcce82728a68951 499 PANTHER PTHR11699 1 499 4.3E-228 T 22-04-2016 APT61_RS04645 d0b341616235bc58793e56432c19a91f 223 SUPERFAMILY SSF102114 24 117 9.02E-7 T 22-04-2016 APT61_RS04645 d0b341616235bc58793e56432c19a91f 223 PANTHER PTHR11228 70 222 3.8E-60 T 22-04-2016 APT61_RS04645 d0b341616235bc58793e56432c19a91f 223 PANTHER PTHR11228 1 54 3.8E-60 T 22-04-2016 APT61_RS04645 d0b341616235bc58793e56432c19a91f 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 38.891 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APT61_RS04645 d0b341616235bc58793e56432c19a91f 223 PANTHER PTHR11228:SF6 70 222 3.8E-60 T 22-04-2016 APT61_RS04645 d0b341616235bc58793e56432c19a91f 223 PANTHER PTHR11228:SF6 1 54 3.8E-60 T 22-04-2016 APT61_RS04645 d0b341616235bc58793e56432c19a91f 223 Pfam PF04055 Radical SAM superfamily 27 180 5.1E-8 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS04645 d0b341616235bc58793e56432c19a91f 223 PIRSF PIRSF000370 1 223 1.1E-71 T 22-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APT61_RS04645 d0b341616235bc58793e56432c19a91f 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 7.3E-110 T 22-04-2016 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 APT61_RS04645 d0b341616235bc58793e56432c19a91f 223 Gene3D G3DSA:3.20.20.70 29 122 1.8E-6 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS04645 d0b341616235bc58793e56432c19a91f 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 1.9E-11 T 22-04-2016 APT61_RS06125 dfef64d8d38a35b1c27988aa29a94429 513 PANTHER PTHR30005 1 512 2.8E-266 T 22-04-2016 APT61_RS06125 dfef64d8d38a35b1c27988aa29a94429 513 Gene3D G3DSA:3.30.420.40 5 131 5.3E-43 T 22-04-2016 APT61_RS06125 dfef64d8d38a35b1c27988aa29a94429 513 PIRSF PIRSF001267 3 506 2.9E-206 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APT61_RS06125 dfef64d8d38a35b1c27988aa29a94429 513 Gene3D G3DSA:3.30.420.150 132 311 3.6E-52 T 22-04-2016 APT61_RS06125 dfef64d8d38a35b1c27988aa29a94429 513 SUPERFAMILY SSF53067 13 133 4.03E-36 T 22-04-2016 APT61_RS06125 dfef64d8d38a35b1c27988aa29a94429 513 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 306 5.6E-97 T 22-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 APT61_RS06125 dfef64d8d38a35b1c27988aa29a94429 513 PANTHER PTHR30005:SF4 1 512 2.8E-266 T 22-04-2016 APT61_RS06125 dfef64d8d38a35b1c27988aa29a94429 513 SUPERFAMILY SSF53067 137 310 2.98E-46 T 22-04-2016 APT61_RS06125 dfef64d8d38a35b1c27988aa29a94429 513 SUPERFAMILY SSF109604 313 506 5.18E-56 T 22-04-2016 APT61_RS06125 dfef64d8d38a35b1c27988aa29a94429 513 Pfam PF02541 Ppx/GppA phosphatase family 26 308 2.0E-102 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APT61_RS21045 8266abbedf9c87dc52372b3aa9993973 543 Pfam PF02690 Na+/Pi-cotransporter 13 147 6.5E-35 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 APT61_RS21045 8266abbedf9c87dc52372b3aa9993973 543 Pfam PF02690 Na+/Pi-cotransporter 158 248 9.2E-8 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 APT61_RS21045 8266abbedf9c87dc52372b3aa9993973 543 PANTHER PTHR10010:SF26 1 446 5.4E-48 T 22-04-2016 APT61_RS21045 8266abbedf9c87dc52372b3aa9993973 543 SUPERFAMILY SSF109755 320 531 2.51E-22 T 22-04-2016 APT61_RS21045 8266abbedf9c87dc52372b3aa9993973 543 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 308 1.1E-129 T 22-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 APT61_RS21045 8266abbedf9c87dc52372b3aa9993973 543 PANTHER PTHR10010 1 446 5.4E-48 T 22-04-2016 APT61_RS21045 8266abbedf9c87dc52372b3aa9993973 543 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 1.6E-154 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 APT61_RS06745 32f91da61693f7e16331200a89aadaa3 257 Pfam PF00005 ABC transporter 21 181 3.1E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS06745 32f91da61693f7e16331200a89aadaa3 257 PANTHER PTHR24220 7 257 9.4E-183 T 22-04-2016 APT61_RS06745 32f91da61693f7e16331200a89aadaa3 257 SUPERFAMILY SSF52540 6 251 2.01E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS06745 32f91da61693f7e16331200a89aadaa3 257 SMART SM00382 30 255 1.7E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS06745 32f91da61693f7e16331200a89aadaa3 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS06745 32f91da61693f7e16331200a89aadaa3 257 PANTHER PTHR24220:SF347 7 257 9.4E-183 T 22-04-2016 APT61_RS06745 32f91da61693f7e16331200a89aadaa3 257 Gene3D G3DSA:3.40.50.300 6 252 3.8E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS06745 32f91da61693f7e16331200a89aadaa3 257 PIRSF PIRSF039085 2 257 2.8E-121 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APT61_RS15205 f6efdbdbc6f16b5695022ccdc4ed417f 161 Pfam PF12019 Type II transport protein GspH 41 147 1.9E-7 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 APT61_RS15205 f6efdbdbc6f16b5695022ccdc4ed417f 161 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 3.3E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS15205 f6efdbdbc6f16b5695022ccdc4ed417f 161 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 1 25 2.7E-7 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS15205 f6efdbdbc6f16b5695022ccdc4ed417f 161 Gene3D G3DSA:3.55.40.10 41 160 3.9E-22 T 22-04-2016 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 APT61_RS15205 f6efdbdbc6f16b5695022ccdc4ed417f 161 PRINTS PR00885 Bacterial general secretion pathway protein H signature 119 134 3.2E-14 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APT61_RS15205 f6efdbdbc6f16b5695022ccdc4ed417f 161 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 3.2E-14 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APT61_RS15205 f6efdbdbc6f16b5695022ccdc4ed417f 161 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 3.2E-14 T 22-04-2016 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 APT61_RS03475 b9cb91e006e639bbddd7980c5bffb989 179 Pfam PF04955 HupE / UreJ protein 8 173 4.3E-28 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein APT61_RS03475 b9cb91e006e639bbddd7980c5bffb989 179 PIRSF PIRSF016919 1 179 6.5E-29 T 22-04-2016 IPR007038 Hydrogenase/Urease accessory protein HupE/UreJ protein APT61_RS08130 d20bb21c797c29b2865568a3603111b5 495 Gene3D G3DSA:3.20.20.80 2 406 5.8E-68 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS08130 d20bb21c797c29b2865568a3603111b5 495 SMART SM00642 4 402 2.2E-55 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS08130 d20bb21c797c29b2865568a3603111b5 495 SUPERFAMILY SSF51445 7 404 4.61E-89 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS08130 d20bb21c797c29b2865568a3603111b5 495 PANTHER PTHR10357 6 110 4.6E-174 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS08130 d20bb21c797c29b2865568a3603111b5 495 PANTHER PTHR10357 160 491 4.6E-174 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS08130 d20bb21c797c29b2865568a3603111b5 495 PANTHER PTHR10357:SF156 6 110 4.6E-174 T 22-04-2016 APT61_RS08130 d20bb21c797c29b2865568a3603111b5 495 PANTHER PTHR10357:SF156 160 491 4.6E-174 T 22-04-2016 APT61_RS08130 d20bb21c797c29b2865568a3603111b5 495 PIRSF PIRSF001021 1 495 1.8E-211 T 22-04-2016 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 APT61_RS08130 d20bb21c797c29b2865568a3603111b5 495 Pfam PF00128 Alpha amylase, catalytic domain 25 367 9.2E-22 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS08130 d20bb21c797c29b2865568a3603111b5 495 SUPERFAMILY SSF51011 405 491 2.98E-28 T 22-04-2016 APT61_RS08130 d20bb21c797c29b2865568a3603111b5 495 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 415 490 6.0E-4 T 22-04-2016 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: REACT_474 APT61_RS08130 d20bb21c797c29b2865568a3603111b5 495 Gene3D G3DSA:2.60.40.1180 408 491 4.8E-30 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta APT61_RS16675 1d632db847988a4f4f7ab9a1c1dc324a 746 SUPERFAMILY SSF56935 33 746 5.49E-134 T 22-04-2016 APT61_RS16675 1d632db847988a4f4f7ab9a1c1dc324a 746 Gene3D G3DSA:2.40.170.20 165 746 1.4E-121 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS16675 1d632db847988a4f4f7ab9a1c1dc324a 746 PANTHER PTHR30069:SF5 7 278 0.0 T 22-04-2016 APT61_RS16675 1d632db847988a4f4f7ab9a1c1dc324a 746 PANTHER PTHR30069:SF5 338 624 0.0 T 22-04-2016 APT61_RS16675 1d632db847988a4f4f7ab9a1c1dc324a 746 PANTHER PTHR30069 7 278 0.0 T 22-04-2016 APT61_RS16675 1d632db847988a4f4f7ab9a1c1dc324a 746 PANTHER PTHR30069 338 624 0.0 T 22-04-2016 APT61_RS16675 1d632db847988a4f4f7ab9a1c1dc324a 746 Pfam PF00593 TonB dependent receptor 460 744 1.6E-34 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS16675 1d632db847988a4f4f7ab9a1c1dc324a 746 Gene3D G3DSA:2.170.130.10 49 164 4.3E-36 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS16675 1d632db847988a4f4f7ab9a1c1dc324a 746 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 729 746 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site APT61_RS16675 1d632db847988a4f4f7ab9a1c1dc324a 746 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 49 746 8.8E-132 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APT61_RS16675 1d632db847988a4f4f7ab9a1c1dc324a 746 Pfam PF07715 TonB-dependent Receptor Plug Domain 48 162 3.6E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS04065 d8cc8144e915c172adc65a104fad741a 285 Pfam PF05552 Conserved TM helix 16 64 2.4E-14 T 22-04-2016 IPR008910 Conserved TM helix APT61_RS04065 d8cc8144e915c172adc65a104fad741a 285 PANTHER PTHR30221:SF7 16 282 2.2E-114 T 22-04-2016 APT61_RS04065 d8cc8144e915c172adc65a104fad741a 285 Gene3D G3DSA:3.30.70.100 182 266 8.7E-31 T 22-04-2016 APT61_RS04065 d8cc8144e915c172adc65a104fad741a 285 SUPERFAMILY SSF82861 28 112 1.24E-17 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APT61_RS04065 d8cc8144e915c172adc65a104fad741a 285 Pfam PF00924 Mechanosensitive ion channel 72 268 3.3E-58 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APT61_RS04065 d8cc8144e915c172adc65a104fad741a 285 SUPERFAMILY SSF82689 181 278 4.84E-32 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APT61_RS04065 d8cc8144e915c172adc65a104fad741a 285 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 22-04-2016 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 APT61_RS04065 d8cc8144e915c172adc65a104fad741a 285 SUPERFAMILY SSF50182 114 179 9.48E-17 T 22-04-2016 IPR010920 LSM domain APT61_RS04065 d8cc8144e915c172adc65a104fad741a 285 PANTHER PTHR30221 16 282 2.2E-114 T 22-04-2016 APT61_RS04065 d8cc8144e915c172adc65a104fad741a 285 Gene3D G3DSA:2.30.30.60 129 178 3.6E-19 T 22-04-2016 APT61_RS11650 242294ab3e6e59a684d97d6c914dc1fc 148 Pfam PF00583 Acetyltransferase (GNAT) family 49 121 2.9E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS11650 242294ab3e6e59a684d97d6c914dc1fc 148 PANTHER PTHR13355:SF5 54 121 7.7E-14 T 22-04-2016 APT61_RS11650 242294ab3e6e59a684d97d6c914dc1fc 148 SUPERFAMILY SSF55729 10 125 2.74E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS11650 242294ab3e6e59a684d97d6c914dc1fc 148 PANTHER PTHR13355 54 121 7.7E-14 T 22-04-2016 APT61_RS11650 242294ab3e6e59a684d97d6c914dc1fc 148 Gene3D G3DSA:3.40.630.30 10 130 2.7E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS20745 f15307c4a8768110243b1e363573eb21 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 7 284 4.7E-91 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APT61_RS20745 f15307c4a8768110243b1e363573eb21 286 PIRSF PIRSF001359 1 286 4.6E-100 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APT61_RS20745 f15307c4a8768110243b1e363573eb21 286 SUPERFAMILY SSF51569 2 285 3.3E-88 T 22-04-2016 APT61_RS20745 f15307c4a8768110243b1e363573eb21 286 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APT61_RS20745 f15307c4a8768110243b1e363573eb21 286 Gene3D G3DSA:3.20.20.70 1 285 8.7E-97 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS20745 f15307c4a8768110243b1e363573eb21 286 PANTHER PTHR30304 1 286 3.0E-90 T 22-04-2016 APT61_RS20745 f15307c4a8768110243b1e363573eb21 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 4 284 5.7E-81 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 APT61_RS18215 3de5f8861028752a5416b6da04522443 164 PANTHER PTHR35089 2 163 1.1E-58 T 22-04-2016 APT61_RS18215 3de5f8861028752a5416b6da04522443 164 PANTHER PTHR35089:SF1 2 163 1.1E-58 T 22-04-2016 APT61_RS18215 3de5f8861028752a5416b6da04522443 164 SMART SM00935 10 164 9.2E-49 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APT61_RS18215 3de5f8861028752a5416b6da04522443 164 SUPERFAMILY SSF111384 20 163 1.18E-34 T 22-04-2016 IPR024930 Skp domain APT61_RS18215 3de5f8861028752a5416b6da04522443 164 PIRSF PIRSF002094 1 164 2.9E-56 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APT61_RS18215 3de5f8861028752a5416b6da04522443 164 Pfam PF03938 Outer membrane protein (OmpH-like) 8 162 5.7E-31 T 22-04-2016 IPR005632 Chaperone protein Skp GO:0051082 APT61_RS18215 3de5f8861028752a5416b6da04522443 164 Gene3D G3DSA:3.30.910.20 11 87 4.4E-15 T 22-04-2016 APT61_RS18215 3de5f8861028752a5416b6da04522443 164 Gene3D G3DSA:3.30.910.20 88 164 3.3E-22 T 22-04-2016 APT61_RS10120 486395a380a1df641c0ca9d0350113f7 604 Gene3D G3DSA:3.90.550.10 275 311 2.9E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS10120 486395a380a1df641c0ca9d0350113f7 604 Gene3D G3DSA:3.90.550.10 110 243 2.9E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS10120 486395a380a1df641c0ca9d0350113f7 604 SUPERFAMILY SSF53448 283 307 7.31E-30 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS10120 486395a380a1df641c0ca9d0350113f7 604 SUPERFAMILY SSF53448 345 481 7.31E-30 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS10120 486395a380a1df641c0ca9d0350113f7 604 SUPERFAMILY SSF53448 111 240 7.31E-30 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS10120 486395a380a1df641c0ca9d0350113f7 604 PANTHER PTHR10587 111 237 5.3E-34 T 22-04-2016 APT61_RS10120 486395a380a1df641c0ca9d0350113f7 604 PANTHER PTHR10587:SF15 111 237 5.3E-34 T 22-04-2016 APT61_RS10120 486395a380a1df641c0ca9d0350113f7 604 Pfam PF00535 Glycosyl transferase family 2 113 305 6.7E-17 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APT61_RS09515 e1cd66b63f44b2ae68f2af2853a7c06e 206 SUPERFAMILY SSF55821 1 204 5.8E-66 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APT61_RS09515 e1cd66b63f44b2ae68f2af2853a7c06e 206 PANTHER PTHR17490 1 205 1.2E-103 T 22-04-2016 APT61_RS09515 e1cd66b63f44b2ae68f2af2853a7c06e 206 PANTHER PTHR17490:SF7 1 205 1.2E-103 T 22-04-2016 APT61_RS09515 e1cd66b63f44b2ae68f2af2853a7c06e 206 Gene3D G3DSA:3.90.870.10 2 203 2.0E-64 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APT61_RS09515 e1cd66b63f44b2ae68f2af2853a7c06e 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 204 8.0E-78 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 APT61_RS09515 e1cd66b63f44b2ae68f2af2853a7c06e 206 Pfam PF01300 Telomere recombination 23 198 2.7E-46 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 APT61_RS13170 aff5447d8bd425dfd54e60929eac3fca 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 270 281 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APT61_RS13170 aff5447d8bd425dfd54e60929eac3fca 495 SUPERFAMILY SSF53720 2 455 8.25E-127 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS13170 aff5447d8bd425dfd54e60929eac3fca 495 PANTHER PTHR11699:SF197 1 452 1.9E-303 T 22-04-2016 APT61_RS13170 aff5447d8bd425dfd54e60929eac3fca 495 PANTHER PTHR11699 1 452 1.9E-303 T 22-04-2016 APT61_RS13170 aff5447d8bd425dfd54e60929eac3fca 495 Gene3D G3DSA:3.40.605.10 2 255 7.8E-78 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS13170 aff5447d8bd425dfd54e60929eac3fca 495 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 486 5.8E-252 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 APT61_RS13170 aff5447d8bd425dfd54e60929eac3fca 495 Gene3D G3DSA:3.40.309.10 256 443 3.4E-43 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS13170 aff5447d8bd425dfd54e60929eac3fca 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APT61_RS13170 aff5447d8bd425dfd54e60929eac3fca 495 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 486 57.439 T 22-04-2016 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71|UniPathway: UPA00185 APT61_RS13170 aff5447d8bd425dfd54e60929eac3fca 495 Pfam PF00171 Aldehyde dehydrogenase family 9 458 3.0E-121 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS16955 4e0cf9d9af28a2cb161e25316c7e728f 70 Pfam PF13275 S4 domain 9 68 2.3E-24 T 22-04-2016 APT61_RS16955 4e0cf9d9af28a2cb161e25316c7e728f 70 Gene3D G3DSA:3.10.290.10 5 68 2.9E-27 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS16955 4e0cf9d9af28a2cb161e25316c7e728f 70 SUPERFAMILY SSF55174 7 68 1.28E-19 T 22-04-2016 APT61_RS16955 4e0cf9d9af28a2cb161e25316c7e728f 70 PANTHER PTHR32319 8 68 1.9E-26 T 22-04-2016 APT61_RS21495 8a72a6dd0aeba9c7c78b6d495e79f10a 202 SUPERFAMILY SSF47616 73 199 5.58E-13 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS21495 8a72a6dd0aeba9c7c78b6d495e79f10a 202 Gene3D G3DSA:3.40.30.10 1 88 1.4E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS21495 8a72a6dd0aeba9c7c78b6d495e79f10a 202 SUPERFAMILY SSF52833 1 100 1.98E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS21495 8a72a6dd0aeba9c7c78b6d495e79f10a 202 PANTHER PTHR11260 1 200 4.7E-101 T 22-04-2016 APT61_RS21495 8a72a6dd0aeba9c7c78b6d495e79f10a 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 71 2.2E-14 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APT61_RS21495 8a72a6dd0aeba9c7c78b6d495e79f10a 202 PANTHER PTHR11260:SF256 1 200 4.7E-101 T 22-04-2016 APT61_RS21495 8a72a6dd0aeba9c7c78b6d495e79f10a 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 97 192 2.8E-7 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal APT61_RS21495 8a72a6dd0aeba9c7c78b6d495e79f10a 202 Gene3D G3DSA:1.20.1050.10 89 197 2.8E-10 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS22045 230df7a8fde0c5337f380083c5379ea6 337 PANTHER PTHR11091 2 336 4.1E-115 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS22045 230df7a8fde0c5337f380083c5379ea6 337 Gene3D G3DSA:3.30.1370.60 74 274 6.1E-76 T 22-04-2016 APT61_RS22045 230df7a8fde0c5337f380083c5379ea6 337 Pfam PF02615 Malate/L-lactate dehydrogenase 7 333 1.7E-110 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS22045 230df7a8fde0c5337f380083c5379ea6 337 Gene3D G3DSA:1.10.1530.10 5 73 4.2E-25 T 22-04-2016 APT61_RS22045 230df7a8fde0c5337f380083c5379ea6 337 PANTHER PTHR11091:SF0 2 336 4.1E-115 T 22-04-2016 APT61_RS22045 230df7a8fde0c5337f380083c5379ea6 337 SUPERFAMILY SSF89733 5 335 1.05E-107 T 22-04-2016 IPR003767 Malate/L-lactate dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS08625 8ba83c793ceb1bd28d33702742afe1da 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 602 0.0 T 22-04-2016 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12|UniPathway: UPA00226 APT61_RS08625 8ba83c793ceb1bd28d33702742afe1da 603 Pfam PF00920 Dehydratase family 66 598 2.3E-155 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS08625 8ba83c793ceb1bd28d33702742afe1da 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS08625 8ba83c793ceb1bd28d33702742afe1da 603 SUPERFAMILY SSF52016 419 600 2.82E-56 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT61_RS08625 8ba83c793ceb1bd28d33702742afe1da 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS08625 8ba83c793ceb1bd28d33702742afe1da 603 PANTHER PTHR21000 1 603 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS08625 8ba83c793ceb1bd28d33702742afe1da 603 PANTHER PTHR21000:SF9 1 603 0.0 T 22-04-2016 APT61_RS08625 8ba83c793ceb1bd28d33702742afe1da 603 SUPERFAMILY SSF143975 1 418 4.32E-145 T 22-04-2016 APT61_RS07395 cbc319721cc7faafb35fea34350df1ff 562 PANTHER PTHR34220 1 561 1.5E-295 T 22-04-2016 APT61_RS07395 cbc319721cc7faafb35fea34350df1ff 562 SUPERFAMILY SSF55781 236 359 2.21E-8 T 22-04-2016 IPR029016 GAF domain-like APT61_RS07395 cbc319721cc7faafb35fea34350df1ff 562 Pfam PF13492 GAF domain 244 355 5.2E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS07395 cbc319721cc7faafb35fea34350df1ff 562 SMART SM00065 218 365 2.5E-10 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS07395 cbc319721cc7faafb35fea34350df1ff 562 Pfam PF06580 Histidine kinase 371 448 4.0E-24 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 APT61_RS07395 cbc319721cc7faafb35fea34350df1ff 562 Pfam PF07694 5TMR of 5TMR-LYT 28 196 1.5E-59 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 APT61_RS07395 cbc319721cc7faafb35fea34350df1ff 562 Gene3D G3DSA:3.30.565.10 422 559 4.5E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07395 cbc319721cc7faafb35fea34350df1ff 562 PANTHER PTHR34220:SF3 1 561 1.5E-295 T 22-04-2016 APT61_RS07395 cbc319721cc7faafb35fea34350df1ff 562 Gene3D G3DSA:3.30.450.40 233 357 7.2E-5 T 22-04-2016 IPR029016 GAF domain-like APT61_RS07395 cbc319721cc7faafb35fea34350df1ff 562 SUPERFAMILY SSF55874 424 557 3.01E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS21550 8bbc8c56d9708009f0435deaa023816b 272 SUPERFAMILY SSF51161 4 260 6.52E-68 T 22-04-2016 IPR011004 Trimeric LpxA-like APT61_RS21550 8bbc8c56d9708009f0435deaa023816b 272 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 2.2E-75 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APT61_RS21550 8bbc8c56d9708009f0435deaa023816b 272 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.0E-10 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS21550 8bbc8c56d9708009f0435deaa023816b 272 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 9.2E-40 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APT61_RS21550 8bbc8c56d9708009f0435deaa023816b 272 PANTHER PTHR23416:SF2 5 258 5.4E-159 T 22-04-2016 APT61_RS21550 8bbc8c56d9708009f0435deaa023816b 272 Gene3D G3DSA:2.160.10.10 143 251 3.4E-32 T 22-04-2016 APT61_RS21550 8bbc8c56d9708009f0435deaa023816b 272 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APT61_RS21550 8bbc8c56d9708009f0435deaa023816b 272 Gene3D G3DSA:1.10.3130.10 7 142 4.4E-52 T 22-04-2016 APT61_RS21550 8bbc8c56d9708009f0435deaa023816b 272 PANTHER PTHR23416 5 258 5.4E-159 T 22-04-2016 APT61_RS21550 8bbc8c56d9708009f0435deaa023816b 272 SMART SM00971 9 113 1.2E-64 T 22-04-2016 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 APT61_RS17090 b0a68acd5fa2ce714a35fea400dc3d54 401 Gene3D G3DSA:1.20.1250.20 217 396 2.9E-21 T 22-04-2016 APT61_RS17090 b0a68acd5fa2ce714a35fea400dc3d54 401 Gene3D G3DSA:1.20.1250.20 22 195 1.6E-21 T 22-04-2016 APT61_RS17090 b0a68acd5fa2ce714a35fea400dc3d54 401 PANTHER PTHR23505:SF8 7 401 1.1E-171 T 22-04-2016 APT61_RS17090 b0a68acd5fa2ce714a35fea400dc3d54 401 SUPERFAMILY SSF103473 13 395 3.27E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS17090 b0a68acd5fa2ce714a35fea400dc3d54 401 Pfam PF07690 Major Facilitator Superfamily 26 260 1.7E-26 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS17090 b0a68acd5fa2ce714a35fea400dc3d54 401 PANTHER PTHR23505 7 401 1.1E-171 T 22-04-2016 APT61_RS03495 f9cbda59bab58221e7fb8cf2d4d3b905 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 2.5E-51 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03495 f9cbda59bab58221e7fb8cf2d4d3b905 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.686 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03495 f9cbda59bab58221e7fb8cf2d4d3b905 100 SUPERFAMILY SSF54111 1 99 6.02E-46 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03495 f9cbda59bab58221e7fb8cf2d4d3b905 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-43 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03495 f9cbda59bab58221e7fb8cf2d4d3b905 100 PANTHER PTHR33569 2 99 1.1E-43 T 22-04-2016 APT61_RS03495 f9cbda59bab58221e7fb8cf2d4d3b905 100 PIRSF PIRSF001223 1 100 2.6E-50 T 22-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03495 f9cbda59bab58221e7fb8cf2d4d3b905 100 PANTHER PTHR33569:SF1 2 99 1.1E-43 T 22-04-2016 APT61_RS03495 f9cbda59bab58221e7fb8cf2d4d3b905 100 Gene3D G3DSA:3.30.280.10 1 99 8.1E-49 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03495 f9cbda59bab58221e7fb8cf2d4d3b905 100 Pfam PF00547 Urease, gamma subunit 1 99 7.2E-47 T 22-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 Gene3D G3DSA:1.10.10.10 144 207 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.4E-24 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 PANTHER PTHR24567:SF27 1 207 1.3E-156 T 22-04-2016 APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.7E-15 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 Gene3D G3DSA:2.60.120.10 6 143 9.0E-45 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 SMART SM00419 160 208 4.5E-17 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 SUPERFAMILY SSF51206 8 136 1.03E-35 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 22-04-2016 IPR018488 Cyclic nucleotide-binding, conserved site APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 SMART SM00100 2 122 1.1E-26 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain APT61_RS01895 c9b73d94c2816acb50d358a803904515 210 PANTHER PTHR24567 1 207 1.3E-156 T 22-04-2016 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 SUPERFAMILY SSF53901 1 259 1.13E-75 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 PIRSF PIRSF000429 1 387 3.0E-130 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 2.9E-145 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 Pfam PF02803 Thiolase, C-terminal domain 262 386 6.2E-51 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 PANTHER PTHR18919:SF69 1 387 6.0E-203 T 22-04-2016 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 Pfam PF00108 Thiolase, N-terminal domain 4 254 4.2E-84 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 PANTHER PTHR18919 1 387 6.0E-203 T 22-04-2016 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 61.823 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 Gene3D G3DSA:3.40.47.10 142 183 1.5E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 Gene3D G3DSA:3.40.47.10 268 386 1.5E-59 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 Gene3D G3DSA:3.40.47.10 184 267 3.5E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 Gene3D G3DSA:3.40.47.10 4 126 3.5E-63 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 3.9E-240 T 22-04-2016 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS01120 6bb1174f22cd33a8b5f07c64987d8d6d 387 SUPERFAMILY SSF53901 262 386 5.57E-44 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS01075 31350df74f062b5e8a0d9cb6b0c9b297 201 PANTHER PTHR38693 1 201 1.9E-69 T 22-04-2016 APT61_RS01075 31350df74f062b5e8a0d9cb6b0c9b297 201 PANTHER PTHR38693:SF1 1 201 1.9E-69 T 22-04-2016 APT61_RS01075 31350df74f062b5e8a0d9cb6b0c9b297 201 Pfam PF02036 SCP-2 sterol transfer family 15 112 6.8E-21 T 22-04-2016 IPR003033 SCP2 sterol-binding domain APT61_RS01075 31350df74f062b5e8a0d9cb6b0c9b297 201 SUPERFAMILY SSF55718 11 111 5.89E-6 T 22-04-2016 IPR003033 SCP2 sterol-binding domain APT61_RS11220 dfbf68ba5e322d0da10e949fd8f434d6 301 Pfam PF03466 LysR substrate binding domain 88 295 1.1E-41 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS11220 dfbf68ba5e322d0da10e949fd8f434d6 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 6.0E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS11220 dfbf68ba5e322d0da10e949fd8f434d6 301 Gene3D G3DSA:3.40.190.10 174 263 1.6E-15 T 22-04-2016 APT61_RS11220 dfbf68ba5e322d0da10e949fd8f434d6 301 SUPERFAMILY SSF53850 88 298 2.02E-44 T 22-04-2016 APT61_RS11220 dfbf68ba5e322d0da10e949fd8f434d6 301 Gene3D G3DSA:1.10.10.10 3 88 2.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11220 dfbf68ba5e322d0da10e949fd8f434d6 301 SUPERFAMILY SSF46785 6 87 2.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11220 dfbf68ba5e322d0da10e949fd8f434d6 301 PANTHER PTHR30537 1 297 1.6E-111 T 22-04-2016 APT61_RS11220 dfbf68ba5e322d0da10e949fd8f434d6 301 PANTHER PTHR30537:SF7 1 297 1.6E-111 T 22-04-2016 APT61_RS11220 dfbf68ba5e322d0da10e949fd8f434d6 301 Gene3D G3DSA:3.40.190.10 92 173 3.1E-24 T 22-04-2016 APT61_RS18125 68969c99b2a6fabd591e279b2ba47b02 134 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 133 35.85 T 22-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 APT61_RS18125 68969c99b2a6fabd591e279b2ba47b02 134 Pfam PF16358 RcsF lipoprotein 29 132 4.2E-49 T 22-04-2016 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 APT61_RS15660 80dcc78c468274459311da2689c71b43 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 5.4E-68 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS15660 80dcc78c468274459311da2689c71b43 248 Gene3D G3DSA:3.40.190.10 103 206 2.0E-32 T 22-04-2016 APT61_RS15660 80dcc78c468274459311da2689c71b43 248 PANTHER PTHR18966 25 248 2.2E-59 T 22-04-2016 APT61_RS15660 80dcc78c468274459311da2689c71b43 248 SMART SM00079 26 245 1.8E-7 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 APT61_RS15660 80dcc78c468274459311da2689c71b43 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APT61_RS15660 80dcc78c468274459311da2689c71b43 248 SMART SM00062 26 246 3.5E-71 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS15660 80dcc78c468274459311da2689c71b43 248 Gene3D G3DSA:3.40.190.10 24 102 8.8E-46 T 22-04-2016 APT61_RS15660 80dcc78c468274459311da2689c71b43 248 Gene3D G3DSA:3.40.190.10 207 246 8.8E-46 T 22-04-2016 APT61_RS15660 80dcc78c468274459311da2689c71b43 248 SUPERFAMILY SSF53850 6 245 2.68E-72 T 22-04-2016 APT61_RS21650 4b07b5452bc3d0fe32262b27be57095a 544 SUPERFAMILY SSF53649 232 477 1.21E-17 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APT61_RS21650 4b07b5452bc3d0fe32262b27be57095a 544 Pfam PF00884 Sulfatase 233 455 3.1E-18 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APT61_RS21650 4b07b5452bc3d0fe32262b27be57095a 544 Gene3D G3DSA:3.40.720.10 230 477 7.1E-14 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APT61_RS04110 429064dff53cc39fe748d2ea920ac9dc 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 177 2.9E-38 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 APT61_RS04110 429064dff53cc39fe748d2ea920ac9dc 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 6 190 36.97 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 APT61_RS04110 429064dff53cc39fe748d2ea920ac9dc 192 PANTHER PTHR37528 2 192 2.7E-63 T 22-04-2016 APT61_RS04110 429064dff53cc39fe748d2ea920ac9dc 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 12 166 6.9E-13 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 APT61_RS04110 429064dff53cc39fe748d2ea920ac9dc 192 SUPERFAMILY SSF101327 7 176 6.8E-52 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 APT61_RS11665 dc65597e25407b030a00e9bf21af45c9 173 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 123 7.1E-13 T 22-04-2016 APT61_RS11665 dc65597e25407b030a00e9bf21af45c9 173 Gene3D G3DSA:3.10.180.10 1 153 3.5E-24 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS11665 dc65597e25407b030a00e9bf21af45c9 173 PANTHER PTHR21366:SF16 1 169 3.8E-19 T 22-04-2016 APT61_RS11665 dc65597e25407b030a00e9bf21af45c9 173 SUPERFAMILY SSF54593 1 155 1.75E-22 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS11665 dc65597e25407b030a00e9bf21af45c9 173 PANTHER PTHR21366 1 169 3.8E-19 T 22-04-2016 APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 PANTHER PTHR32039 1 506 2.0E-258 T 22-04-2016 APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 1.6E-228 T 22-04-2016 IPR004482 Mg chelatase-related protein APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 SUPERFAMILY SSF54211 10 169 2.88E-29 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 SUPERFAMILY SSF52540 188 502 1.44E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 SMART SM00382 209 389 1.3E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 386 1.3E-89 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 9.0E-44 T 22-04-2016 APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 Gene3D G3DSA:3.30.230.10 5 167 3.5E-26 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 288 302 7.2E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 316 329 7.2E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 208 223 7.2E-5 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 Gene3D G3DSA:3.40.50.300 188 384 4.9E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 288 303 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 492 1.0E-28 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain APT61_RS00775 665bb57980c0b2b855be445741d249f5 506 PANTHER PTHR32039:SF7 1 506 2.0E-258 T 22-04-2016 IPR004482 Mg chelatase-related protein APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 Gene3D G3DSA:3.30.1490.20 687 745 4.2E-25 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 SUPERFAMILY SSF48108 396 554 6.02E-53 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 SMART SM01096 424 547 1.7E-74 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 Gene3D G3DSA:3.40.50.20 539 663 1.2E-61 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 Gene3D G3DSA:3.30.1490.20 141 199 2.0E-28 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.178 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 SUPERFAMILY SSF56059 128 401 7.95E-110 T 22-04-2016 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 Gene3D G3DSA:3.40.50.1380 939 1072 6.5E-40 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 1.9E-39 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 Gene3D G3DSA:3.30.470.20 746 933 4.9E-82 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 Gene3D G3DSA:3.30.470.20 200 399 3.1E-75 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.359 T 22-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 4.2E-38 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.3E-77 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 PANTHER PTHR11405:SF5 1 1073 0.0 T 22-04-2016 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 SMART SM00851 956 1042 2.9E-31 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 Gene3D G3DSA:3.40.50.20 3 108 1.2E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 SUPERFAMILY SSF56059 674 934 7.42E-105 T 22-04-2016 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.4E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.4E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.4E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.4E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.4E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.4E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.4E-64 T 22-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 SUPERFAMILY SSF52440 557 676 7.77E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 PANTHER PTHR11405 1 1073 0.0 T 22-04-2016 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 Gene3D G3DSA:1.10.1030.10 400 538 6.8E-52 T 22-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 SUPERFAMILY SSF52335 938 1071 8.9E-36 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 SUPERFAMILY SSF52440 1 127 5.61E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 Pfam PF02142 MGS-like domain 957 1041 1.9E-18 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APT61_RS18930 ffa6d6708a65dfc5146a9bde04c3de00 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APT61_RS00675 2bf666f1864dc62e663796c8c3ca79ec 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 1.2E-125 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS00675 2bf666f1864dc62e663796c8c3ca79ec 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 3.1E-34 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APT61_RS00675 2bf666f1864dc62e663796c8c3ca79ec 334 SUPERFAMILY SSF51735 1 170 1.95E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00675 2bf666f1864dc62e663796c8c3ca79ec 334 PANTHER PTHR32338 1 334 4.6E-165 T 22-04-2016 APT61_RS00675 2bf666f1864dc62e663796c8c3ca79ec 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 22-04-2016 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS00675 2bf666f1864dc62e663796c8c3ca79ec 334 Gene3D G3DSA:3.40.50.720 1 162 1.9E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00675 2bf666f1864dc62e663796c8c3ca79ec 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 38.755 T 22-04-2016 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS00675 2bf666f1864dc62e663796c8c3ca79ec 334 Gene3D G3DSA:3.30.360.10 163 308 2.3E-48 T 22-04-2016 APT61_RS00675 2bf666f1864dc62e663796c8c3ca79ec 334 SUPERFAMILY SSF55347 154 308 5.43E-50 T 22-04-2016 APT61_RS00675 2bf666f1864dc62e663796c8c3ca79ec 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 5.5E-18 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS00675 2bf666f1864dc62e663796c8c3ca79ec 334 SMART SM00859 3 146 6.0E-56 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APT61_RS20945 2477d30daf2fe7274dab4e75c7e91eec 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 5.5E-84 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 APT61_RS20945 2477d30daf2fe7274dab4e75c7e91eec 202 Pfam PF01726 LexA DNA binding domain 1 65 1.7E-30 T 22-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 APT61_RS20945 2477d30daf2fe7274dab4e75c7e91eec 202 SUPERFAMILY SSF46785 3 69 5.73E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20945 2477d30daf2fe7274dab4e75c7e91eec 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.406 T 22-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 APT61_RS20945 2477d30daf2fe7274dab4e75c7e91eec 202 Gene3D G3DSA:2.10.109.10 76 198 3.3E-46 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APT61_RS20945 2477d30daf2fe7274dab4e75c7e91eec 202 PANTHER PTHR33516 1 202 1.3E-105 T 22-04-2016 APT61_RS20945 2477d30daf2fe7274dab4e75c7e91eec 202 PANTHER PTHR33516:SF2 1 202 1.3E-105 T 22-04-2016 APT61_RS20945 2477d30daf2fe7274dab4e75c7e91eec 202 Gene3D G3DSA:1.10.10.10 1 69 1.1E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20945 2477d30daf2fe7274dab4e75c7e91eec 202 SUPERFAMILY SSF51306 76 198 6.1E-38 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APT61_RS20945 2477d30daf2fe7274dab4e75c7e91eec 202 Pfam PF00717 Peptidase S24-like 114 179 5.6E-15 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B APT61_RS20945 2477d30daf2fe7274dab4e75c7e91eec 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 3.1E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APT61_RS20945 2477d30daf2fe7274dab4e75c7e91eec 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 3.1E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APT61_RS20945 2477d30daf2fe7274dab4e75c7e91eec 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 3.1E-14 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APT61_RS10300 2a1abce566589a708cf2e1ec912d6c54 348 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 310 2.2E-54 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 APT61_RS10300 2a1abce566589a708cf2e1ec912d6c54 348 PANTHER PTHR22893 1 311 1.6E-70 T 22-04-2016 APT61_RS10300 2a1abce566589a708cf2e1ec912d6c54 348 Gene3D G3DSA:3.20.20.70 2 315 1.7E-75 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS10300 2a1abce566589a708cf2e1ec912d6c54 348 SUPERFAMILY SSF51395 2 318 2.16E-76 T 22-04-2016 APT61_RS06170 30b283c47ff7561ca8502fdfbe3a563e 487 Gene3D G3DSA:1.25.40.10 310 453 4.5E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS06170 30b283c47ff7561ca8502fdfbe3a563e 487 Pfam PF01435 Peptidase family M48 74 259 1.6E-25 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APT61_RS06170 30b283c47ff7561ca8502fdfbe3a563e 487 Pfam PF14559 Tetratricopeptide repeat 354 418 2.4E-10 T 22-04-2016 APT61_RS06170 30b283c47ff7561ca8502fdfbe3a563e 487 PANTHER PTHR22726:SF10 1 351 3.9E-141 T 22-04-2016 APT61_RS06170 30b283c47ff7561ca8502fdfbe3a563e 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 7 482 32.179 T 22-04-2016 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 APT61_RS06170 30b283c47ff7561ca8502fdfbe3a563e 487 Gene3D G3DSA:3.30.2010.10 69 150 5.4E-16 T 22-04-2016 APT61_RS06170 30b283c47ff7561ca8502fdfbe3a563e 487 PANTHER PTHR22726 1 351 3.9E-141 T 22-04-2016 APT61_RS06170 30b283c47ff7561ca8502fdfbe3a563e 487 SUPERFAMILY SSF48452 313 427 5.12E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS18830 8fd662830be8ce9e583f0ad470fa8c4a 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 4.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS18830 8fd662830be8ce9e583f0ad470fa8c4a 281 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 4.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS18830 8fd662830be8ce9e583f0ad470fa8c4a 281 SMART SM00342 194 277 4.2E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS18830 8fd662830be8ce9e583f0ad470fa8c4a 281 PANTHER PTHR11019 1 281 2.2E-141 T 22-04-2016 APT61_RS18830 8fd662830be8ce9e583f0ad470fa8c4a 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS18830 8fd662830be8ce9e583f0ad470fa8c4a 281 Gene3D G3DSA:1.10.10.60 232 278 2.3E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS18830 8fd662830be8ce9e583f0ad470fa8c4a 281 SUPERFAMILY SSF51215 8 163 3.92E-37 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS18830 8fd662830be8ce9e583f0ad470fa8c4a 281 Gene3D G3DSA:2.60.120.280 8 168 2.7E-49 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS18830 8fd662830be8ce9e583f0ad470fa8c4a 281 Pfam PF02311 AraC-like ligand binding domain 43 160 5.4E-25 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS18830 8fd662830be8ce9e583f0ad470fa8c4a 281 SUPERFAMILY SSF46689 176 227 7.26E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS18830 8fd662830be8ce9e583f0ad470fa8c4a 281 Pfam PF12833 Helix-turn-helix domain 200 278 2.6E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS18830 8fd662830be8ce9e583f0ad470fa8c4a 281 PANTHER PTHR11019:SF123 1 281 2.2E-141 T 22-04-2016 APT61_RS18830 8fd662830be8ce9e583f0ad470fa8c4a 281 Gene3D G3DSA:1.10.10.60 173 231 1.0E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS18830 8fd662830be8ce9e583f0ad470fa8c4a 281 SUPERFAMILY SSF46689 231 279 3.27E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 PRINTS PR00183 E.coli/Salmonella-type porin signature 278 297 2.7E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 2.7E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 2.7E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.7E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 PRINTS PR00183 E.coli/Salmonella-type porin signature 240 257 2.7E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 PRINTS PR00183 E.coli/Salmonella-type porin signature 148 170 2.7E-73 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 SUPERFAMILY SSF56935 22 370 4.45E-80 T 22-04-2016 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 PANTHER PTHR34501:SF1 2 370 9.6E-268 T 22-04-2016 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 Gene3D G3DSA:2.40.160.10 22 370 2.5E-104 T 22-04-2016 IPR023614 Porin domain APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 322 338 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 Pfam PF00267 Gram-negative porin 27 370 1.4E-150 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 1.2E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 234 246 1.2E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 322 339 1.2E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.2E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 150 161 1.2E-18 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS07020 64b61f2128d36cb018ea0d97d976b53c 370 PANTHER PTHR34501 2 370 9.6E-268 T 22-04-2016 APT61_RS09170 e73e848477d5577e09ec3f9fedb3dccb 312 SUPERFAMILY SSF53271 66 303 3.92E-67 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS09170 e73e848477d5577e09ec3f9fedb3dccb 312 Gene3D G3DSA:3.40.50.2020 1 156 1.7E-71 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS09170 e73e848477d5577e09ec3f9fedb3dccb 312 PANTHER PTHR10210 1 312 9.2E-189 T 22-04-2016 APT61_RS09170 e73e848477d5577e09ec3f9fedb3dccb 312 Gene3D G3DSA:3.40.50.2020 157 281 1.4E-52 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS09170 e73e848477d5577e09ec3f9fedb3dccb 312 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 1 118 2.0E-49 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APT61_RS09170 e73e848477d5577e09ec3f9fedb3dccb 312 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 310 3.4E-30 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APT61_RS09170 e73e848477d5577e09ec3f9fedb3dccb 312 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 1 311 1.6E-127 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APT61_RS09170 e73e848477d5577e09ec3f9fedb3dccb 312 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 1 311 49.803 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 APT61_RS09170 e73e848477d5577e09ec3f9fedb3dccb 312 SMART SM01400 1 118 5.7E-76 T 22-04-2016 APT61_RS09170 e73e848477d5577e09ec3f9fedb3dccb 312 PANTHER PTHR10210:SF41 1 312 9.2E-189 T 22-04-2016 APT61_RS09170 e73e848477d5577e09ec3f9fedb3dccb 312 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 126 141 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 APT61_RS16085 4201a2beeae54a6554415b915d1f8774 238 SUPERFAMILY SSF64288 58 236 2.36E-44 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APT61_RS16085 4201a2beeae54a6554415b915d1f8774 238 Pfam PF07702 UTRA domain 92 229 6.1E-32 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APT61_RS16085 4201a2beeae54a6554415b915d1f8774 238 SUPERFAMILY SSF46785 2 73 2.86E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS16085 4201a2beeae54a6554415b915d1f8774 238 PANTHER PTHR11751 5 72 3.5E-32 T 22-04-2016 APT61_RS16085 4201a2beeae54a6554415b915d1f8774 238 PANTHER PTHR11751 119 142 3.5E-32 T 22-04-2016 APT61_RS16085 4201a2beeae54a6554415b915d1f8774 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 5.5E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS16085 4201a2beeae54a6554415b915d1f8774 238 Gene3D G3DSA:3.40.1410.10 84 234 3.2E-47 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APT61_RS16085 4201a2beeae54a6554415b915d1f8774 238 SMART SM00345 10 69 4.8E-24 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS16085 4201a2beeae54a6554415b915d1f8774 238 Gene3D G3DSA:1.10.10.10 3 75 2.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS16085 4201a2beeae54a6554415b915d1f8774 238 SMART SM00866 90 229 1.9E-28 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APT61_RS16085 4201a2beeae54a6554415b915d1f8774 238 PANTHER PTHR11751:SF292 5 72 3.5E-32 T 22-04-2016 APT61_RS16085 4201a2beeae54a6554415b915d1f8774 238 PANTHER PTHR11751:SF292 119 142 3.5E-32 T 22-04-2016 APT61_RS16085 4201a2beeae54a6554415b915d1f8774 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 2.2E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS16085 4201a2beeae54a6554415b915d1f8774 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 2.2E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS07875 2300f129baad7887d082dc2f8fda7f2d 452 PANTHER PTHR11785 7 450 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS07875 2300f129baad7887d082dc2f8fda7f2d 452 PIRSF PIRSF006060 3 447 1.1E-71 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS07875 2300f129baad7887d082dc2f8fda7f2d 452 PANTHER PTHR11785:SF350 7 450 0.0 T 22-04-2016 APT61_RS07875 2300f129baad7887d082dc2f8fda7f2d 452 Pfam PF13520 Amino acid permease 49 408 8.7E-35 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 Gene3D G3DSA:3.40.50.740 30 132 1.0E-45 T 22-04-2016 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 Gene3D G3DSA:3.40.50.740 345 442 1.0E-45 T 22-04-2016 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 SUPERFAMILY SSF50692 613 756 1.2E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS21325 d40a74469409900e4ee95196471f808f 759 Pfam PF01568 Molydopterin dinucleotide binding domain 619 724 3.4E-24 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 PANTHER PTHR11615 386 759 0.0 T 22-04-2016 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 PANTHER PTHR11615 3 368 0.0 T 22-04-2016 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 Pfam PF00384 Molybdopterin oxidoreductase 38 499 5.5E-108 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 Gene3D G3DSA:2.40.40.20 594 752 9.0E-57 T 22-04-2016 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 Gene3D G3DSA:3.40.228.10 137 344 1.5E-59 T 22-04-2016 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 441 458 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 PANTHER PTHR11615:SF163 386 759 0.0 T 22-04-2016 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 PANTHER PTHR11615:SF163 3 368 0.0 T 22-04-2016 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 SUPERFAMILY SSF53706 2 615 7.98E-159 T 22-04-2016 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 657 684 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 6 757 0.0 T 22-04-2016 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 APT61_RS21325 d40a74469409900e4ee95196471f808f 759 Gene3D G3DSA:3.90.55.10 443 548 1.4E-30 T 22-04-2016 APT61_RS13940 21e3884f358ece631eabaf82c013ace5 728 Pfam PF07715 TonB-dependent Receptor Plug Domain 75 175 4.7E-15 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS13940 21e3884f358ece631eabaf82c013ace5 728 Gene3D G3DSA:2.170.130.10 54 183 2.7E-33 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS13940 21e3884f358ece631eabaf82c013ace5 728 PANTHER PTHR32552 16 41 1.2E-291 T 22-04-2016 APT61_RS13940 21e3884f358ece631eabaf82c013ace5 728 PANTHER PTHR32552 67 728 1.2E-291 T 22-04-2016 APT61_RS13940 21e3884f358ece631eabaf82c013ace5 728 SUPERFAMILY SSF56935 38 728 2.75E-117 T 22-04-2016 APT61_RS13940 21e3884f358ece631eabaf82c013ace5 728 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 711 728 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site APT61_RS13940 21e3884f358ece631eabaf82c013ace5 728 Gene3D G3DSA:2.40.170.20 193 728 1.1E-128 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS13940 21e3884f358ece631eabaf82c013ace5 728 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 77 728 1.1E-153 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APT61_RS13940 21e3884f358ece631eabaf82c013ace5 728 PANTHER PTHR32552:SF37 16 41 1.2E-291 T 22-04-2016 APT61_RS13940 21e3884f358ece631eabaf82c013ace5 728 PANTHER PTHR32552:SF37 67 728 1.2E-291 T 22-04-2016 APT61_RS13940 21e3884f358ece631eabaf82c013ace5 728 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 48 - T 22-04-2016 IPR010916 TonB box, conserved site APT61_RS13940 21e3884f358ece631eabaf82c013ace5 728 Pfam PF00593 TonB dependent receptor 493 727 4.5E-30 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS22000 fea0e5c691ad713c3485624e4511193d 120 ProDom PD277113 MEMBRANE INNER YIDG TRANSMEMBRANE STY3975 RV2273/MT2334 MB2296 12 71 5.0E-18 T 22-04-2016 IPR020264 Uncharacterised protein family YidG APT61_RS22000 fea0e5c691ad713c3485624e4511193d 120 Pfam PF02656 Domain of unknown function (DUF202) 12 68 2.1E-10 T 22-04-2016 IPR003807 Domain of unknown function DUF202 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 PANTHER PTHR30222:SF10 4 341 2.7E-179 T 22-04-2016 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 Gene3D G3DSA:3.40.190.10 22 128 1.3E-63 T 22-04-2016 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 Gene3D G3DSA:3.40.190.10 266 309 1.3E-63 T 22-04-2016 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 Pfam PF13343 Bacterial extracellular solute-binding protein 73 317 1.7E-38 T 22-04-2016 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 PIRSF PIRSF019574 1 344 5.5E-131 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 SUPERFAMILY SSF53850 23 341 3.07E-94 T 22-04-2016 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 PANTHER PTHR30222 4 341 2.7E-179 T 22-04-2016 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 159 8.5E-93 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 44 65 8.5E-93 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 289 315 8.5E-93 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 163 182 8.5E-93 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 101 8.5E-93 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 72 86 8.5E-93 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 244 263 8.5E-93 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 28 44 8.5E-93 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 200 219 8.5E-93 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 119 135 8.5E-93 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS13845 ee1ca11af47428cac7f230e326bd994e 344 Gene3D G3DSA:3.40.190.10 130 265 1.2E-23 T 22-04-2016 APT61_RS07320 d7c4a03f3c3e999e0b5d1714bf166eb2 464 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 357 365 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site APT61_RS07320 d7c4a03f3c3e999e0b5d1714bf166eb2 464 SUPERFAMILY SSF51445 2 455 9.5E-164 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS07320 d7c4a03f3c3e999e0b5d1714bf166eb2 464 PANTHER PTHR10353 4 463 1.9E-279 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS07320 d7c4a03f3c3e999e0b5d1714bf166eb2 464 Gene3D G3DSA:3.20.20.80 2 461 3.1E-148 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS07320 d7c4a03f3c3e999e0b5d1714bf166eb2 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 424 436 2.3E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS07320 d7c4a03f3c3e999e0b5d1714bf166eb2 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 291 305 2.3E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS07320 d7c4a03f3c3e999e0b5d1714bf166eb2 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 399 416 2.3E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS07320 d7c4a03f3c3e999e0b5d1714bf166eb2 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 357 365 2.3E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS07320 d7c4a03f3c3e999e0b5d1714bf166eb2 464 PRINTS PR00131 Glycosyl hydrolase family 1 signature 378 389 2.3E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS07320 d7c4a03f3c3e999e0b5d1714bf166eb2 464 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site APT61_RS07320 d7c4a03f3c3e999e0b5d1714bf166eb2 464 PANTHER PTHR10353:SF35 4 463 1.9E-279 T 22-04-2016 APT61_RS07320 d7c4a03f3c3e999e0b5d1714bf166eb2 464 Pfam PF00232 Glycosyl hydrolase family 1 2 459 1.1E-154 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 SUPERFAMILY SSF52374 3 298 1.8E-111 T 22-04-2016 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 PANTHER PTHR11451 2 314 1.7E-100 T 22-04-2016 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 Gene3D G3DSA:3.40.50.620 2 67 6.6E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 Gene3D G3DSA:3.40.50.620 181 231 6.6E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 Gene3D G3DSA:3.90.800.10 68 180 1.1E-38 T 22-04-2016 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 Gene3D G3DSA:1.10.1160.10 233 314 2.0E-36 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 PANTHER PTHR11451:SF41 2 314 1.7E-100 T 22-04-2016 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 1.6E-119 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 Gene3D G3DSA:1.10.10.350 363 461 5.0E-31 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 8.4E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 8.4E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 8.4E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 8.4E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 8.4E-28 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 SUPERFAMILY SSF48163 299 461 2.75E-46 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 465 1.3E-207 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APT61_RS06415 d4905263c02fb42bcf08f7c3439f2d95 471 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 3 461 33.88 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 Gene3D G3DSA:3.40.50.300 551 777 1.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 1.0E-13 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 Gene3D G3DSA:3.40.50.300 160 341 2.2E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 Gene3D G3DSA:1.10.1780.10 1 147 5.1E-47 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 SMART SM00382 198 344 7.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 SMART SM00382 597 768 7.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 PANTHER PTHR11638 1 856 0.0 T 22-04-2016 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 SUPERFAMILY SSF81923 4 156 1.19E-42 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 PANTHER PTHR11638:SF18 1 856 0.0 T 22-04-2016 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 SUPERFAMILY SSF52540 159 545 1.05E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 1.0E-26 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 SUPERFAMILY SSF52540 546 853 2.1E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 SMART SM01086 766 855 9.8E-35 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 1.1E-55 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.3E-13 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.7E-10 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 Gene3D G3DSA:1.10.8.60 778 855 3.4E-28 T 22-04-2016 APT61_RS05670 c229df1db7aad1880cff6fdb035e6eb7 857 Gene3D G3DSA:1.10.8.60 343 428 5.8E-37 T 22-04-2016 APT61_RS05085 8603ef19e0b5b8056021193a6f946b3d 70 PANTHER PTHR11544 1 70 1.9E-43 T 22-04-2016 APT61_RS05085 8603ef19e0b5b8056021193a6f946b3d 70 PANTHER PTHR11544:SF65 1 70 1.9E-43 T 22-04-2016 APT61_RS05085 8603ef19e0b5b8056021193a6f946b3d 70 PRINTS PR00050 Cold shock protein signature 7 22 1.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS05085 8603ef19e0b5b8056021193a6f946b3d 70 PRINTS PR00050 Cold shock protein signature 28 37 1.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS05085 8603ef19e0b5b8056021193a6f946b3d 70 PRINTS PR00050 Cold shock protein signature 43 61 1.2E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS05085 8603ef19e0b5b8056021193a6f946b3d 70 Gene3D G3DSA:2.40.50.140 5 69 4.6E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS05085 8603ef19e0b5b8056021193a6f946b3d 70 PIRSF PIRSF002599 1 70 3.1E-24 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APT61_RS05085 8603ef19e0b5b8056021193a6f946b3d 70 SUPERFAMILY SSF50249 3 69 3.0E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS05085 8603ef19e0b5b8056021193a6f946b3d 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 22-04-2016 IPR019844 Cold-shock conserved site APT61_RS05085 8603ef19e0b5b8056021193a6f946b3d 70 SMART SM00357 6 70 2.1E-29 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APT61_RS05085 8603ef19e0b5b8056021193a6f946b3d 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.7E-31 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS03990 3a4ce0b4d881ed0bc540a982bad0531b 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 135 1.1E-57 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APT61_RS03990 3a4ce0b4d881ed0bc540a982bad0531b 138 PANTHER PTHR33317 1 135 1.6E-45 T 22-04-2016 APT61_RS03990 3a4ce0b4d881ed0bc540a982bad0531b 138 SUPERFAMILY SSF53098 3 136 4.25E-42 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS03990 3a4ce0b4d881ed0bc540a982bad0531b 138 Pfam PF03652 Holliday junction resolvase 4 135 2.3E-41 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APT61_RS03990 3a4ce0b4d881ed0bc540a982bad0531b 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 138 25.729 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 APT61_RS03990 3a4ce0b4d881ed0bc540a982bad0531b 138 SMART SM00732 3 103 4.8E-42 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APT61_RS03990 3a4ce0b4d881ed0bc540a982bad0531b 138 Gene3D G3DSA:3.30.420.140 3 136 1.8E-46 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 APT61_RS15630 69190f37a26659ea6f18e4ad45dde57a 157 SUPERFAMILY SSF47979 95 148 1.31E-14 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APT61_RS15630 69190f37a26659ea6f18e4ad45dde57a 157 Gene3D G3DSA:1.10.10.10 36 103 6.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15630 69190f37a26659ea6f18e4ad45dde57a 157 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 95 148 1.5E-14 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APT61_RS15630 69190f37a26659ea6f18e4ad45dde57a 157 SUPERFAMILY SSF46785 48 117 2.37E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15630 69190f37a26659ea6f18e4ad45dde57a 157 Gene3D G3DSA:1.10.60.10 107 149 5.3E-19 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 APT61_RS15630 69190f37a26659ea6f18e4ad45dde57a 157 SMART SM00529 56 155 3.2E-39 T 22-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 APT61_RS15630 69190f37a26659ea6f18e4ad45dde57a 157 PANTHER PTHR33238 35 149 3.0E-23 T 22-04-2016 APT61_RS15630 69190f37a26659ea6f18e4ad45dde57a 157 PANTHER PTHR33238:SF1 35 149 3.0E-23 T 22-04-2016 APT61_RS15630 69190f37a26659ea6f18e4ad45dde57a 157 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 38 92 1.7E-9 T 22-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 APT61_RS18960 cf12dcb472527266fed9058e4c0915b1 149 Gene3D G3DSA:3.10.50.40 3 80 4.3E-19 T 22-04-2016 APT61_RS18960 cf12dcb472527266fed9058e4c0915b1 149 Gene3D G3DSA:3.10.50.40 130 145 4.3E-19 T 22-04-2016 APT61_RS18960 cf12dcb472527266fed9058e4c0915b1 149 PANTHER PTHR10516 5 77 2.0E-28 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APT61_RS18960 cf12dcb472527266fed9058e4c0915b1 149 PANTHER PTHR10516 133 146 2.0E-28 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APT61_RS18960 cf12dcb472527266fed9058e4c0915b1 149 PANTHER PTHR10516:SF329 5 77 2.0E-28 T 22-04-2016 APT61_RS18960 cf12dcb472527266fed9058e4c0915b1 149 PANTHER PTHR10516:SF329 133 146 2.0E-28 T 22-04-2016 APT61_RS18960 cf12dcb472527266fed9058e4c0915b1 149 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 141 1.9E-14 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APT61_RS18960 cf12dcb472527266fed9058e4c0915b1 149 SUPERFAMILY SSF54534 5 143 8.64E-36 T 22-04-2016 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 SUPERFAMILY SSF88697 276 365 6.63E-24 T 22-04-2016 IPR015947 PUA-like domain APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 258 36.098 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 Gene3D G3DSA:3.40.1160.10 3 260 1.8E-58 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 1.6E-56 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 1.6E-56 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 1.6E-56 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 1.6E-56 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 1.6E-56 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 Gene3D G3DSA:2.30.130.10 273 365 3.7E-26 T 22-04-2016 IPR015947 PUA-like domain APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 Pfam PF00696 Amino acid kinase family 6 234 6.5E-44 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 Pfam PF01472 PUA domain 276 350 1.6E-22 T 22-04-2016 IPR002478 PUA domain GO:0003723 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 PANTHER PTHR11063 3 367 1.7E-145 T 22-04-2016 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 1.4E-155 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 SMART SM00359 276 359 6.0E-22 T 22-04-2016 IPR002478 PUA domain GO:0003723 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 PIRSF PIRSF000729 1 367 1.5E-146 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APT61_RS17920 2d2958f6947d93a3f42bd16f701e4f30 367 SUPERFAMILY SSF53633 6 256 6.68E-65 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS09450 cbf86a69b73183d70d9e38b1a1bae5de 131 SUPERFAMILY SSF54637 7 130 1.68E-40 T 22-04-2016 IPR029069 HotDog domain APT61_RS09450 cbf86a69b73183d70d9e38b1a1bae5de 131 Gene3D G3DSA:3.10.129.10 5 130 1.1E-43 T 22-04-2016 IPR029069 HotDog domain APT61_RS09450 cbf86a69b73183d70d9e38b1a1bae5de 131 PANTHER PTHR11049:SF5 2 130 1.6E-76 T 22-04-2016 APT61_RS09450 cbf86a69b73183d70d9e38b1a1bae5de 131 PANTHER PTHR11049 2 130 1.6E-76 T 22-04-2016 APT61_RS09450 cbf86a69b73183d70d9e38b1a1bae5de 131 Pfam PF03061 Thioesterase superfamily 25 96 2.0E-19 T 22-04-2016 IPR006683 Thioesterase domain APT61_RS18055 48f1a57ba5be1c39974bee4d1a7f8094 259 SUPERFAMILY SSF56219 37 253 3.53E-25 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APT61_RS18055 48f1a57ba5be1c39974bee4d1a7f8094 259 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 42 245 4.5E-8 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APT61_RS18055 48f1a57ba5be1c39974bee4d1a7f8094 259 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 253 51.295 T 22-04-2016 IPR022958 Uncharacterised protein family UPF0294 APT61_RS18055 48f1a57ba5be1c39974bee4d1a7f8094 259 Gene3D G3DSA:3.60.10.10 34 252 6.7E-6 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APT61_RS14075 d5b9deddfdc0e012776575f25cb8a7b9 420 SUPERFAMILY SSF117143 73 381 3.53E-76 T 22-04-2016 APT61_RS14075 d5b9deddfdc0e012776575f25cb8a7b9 420 PANTHER PTHR30435 298 420 1.1E-101 T 22-04-2016 APT61_RS14075 d5b9deddfdc0e012776575f25cb8a7b9 420 PANTHER PTHR30435 1 117 1.1E-101 T 22-04-2016 APT61_RS14075 d5b9deddfdc0e012776575f25cb8a7b9 420 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 402 4.5E-93 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G APT61_RS14075 d5b9deddfdc0e012776575f25cb8a7b9 420 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site APT61_RS14075 d5b9deddfdc0e012776575f25cb8a7b9 420 Pfam PF07559 Flagellar basal body protein FlaE 177 301 1.5E-18 T 22-04-2016 IPR011491 Flagellar hook protein FlgE APT61_RS14075 d5b9deddfdc0e012776575f25cb8a7b9 420 Pfam PF00460 Flagella basal body rod protein 4 33 1.1E-11 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APT61_RS14075 d5b9deddfdc0e012776575f25cb8a7b9 420 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 342 419 2.5E-20 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APT61_RS14075 d5b9deddfdc0e012776575f25cb8a7b9 420 PANTHER PTHR30435:SF1 298 420 1.1E-101 T 22-04-2016 APT61_RS14075 d5b9deddfdc0e012776575f25cb8a7b9 420 PANTHER PTHR30435:SF1 1 117 1.1E-101 T 22-04-2016 APT61_RS10280 f8c9a681ccd1a403d7ff3fb63226f90f 608 PANTHER PTHR31616 11 602 6.6E-102 T 22-04-2016 APT61_RS10280 f8c9a681ccd1a403d7ff3fb63226f90f 608 Gene3D G3DSA:1.50.10.10 237 604 4.6E-48 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APT61_RS10280 f8c9a681ccd1a403d7ff3fb63226f90f 608 PANTHER PTHR31616:SF0 11 602 6.6E-102 T 22-04-2016 APT61_RS10280 f8c9a681ccd1a403d7ff3fb63226f90f 608 SUPERFAMILY SSF48208 223 598 2.95E-72 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APT61_RS10280 f8c9a681ccd1a403d7ff3fb63226f90f 608 Pfam PF00723 Glycosyl hydrolases family 15 236 493 8.7E-26 T 22-04-2016 IPR011613 Glycoside hydrolase family 15/Phosphorylase b kinase regulatory chain family Reactome: REACT_474 APT61_RS17735 a6873c386965404d7f0d3a9075f7cce7 271 PANTHER PTHR11019:SF86 30 271 3.8E-41 T 22-04-2016 APT61_RS17735 a6873c386965404d7f0d3a9075f7cce7 271 SUPERFAMILY SSF46689 166 216 4.26E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS17735 a6873c386965404d7f0d3a9075f7cce7 271 PANTHER PTHR11019 30 271 3.8E-41 T 22-04-2016 APT61_RS17735 a6873c386965404d7f0d3a9075f7cce7 271 SMART SM00342 182 265 3.1E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS17735 a6873c386965404d7f0d3a9075f7cce7 271 SUPERFAMILY SSF46689 218 268 3.23E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS17735 a6873c386965404d7f0d3a9075f7cce7 271 Pfam PF02311 AraC-like ligand binding domain 30 99 1.3E-7 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS17735 a6873c386965404d7f0d3a9075f7cce7 271 Gene3D G3DSA:2.60.120.10 8 88 9.9E-11 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS17735 a6873c386965404d7f0d3a9075f7cce7 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 249 3.42E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS17735 a6873c386965404d7f0d3a9075f7cce7 271 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 265 3.42E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS17735 a6873c386965404d7f0d3a9075f7cce7 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 261 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS17735 a6873c386965404d7f0d3a9075f7cce7 271 Gene3D G3DSA:1.10.10.60 160 218 9.7E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS17735 a6873c386965404d7f0d3a9075f7cce7 271 SUPERFAMILY SSF51182 29 93 4.89E-9 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS17735 a6873c386965404d7f0d3a9075f7cce7 271 Gene3D G3DSA:1.10.10.60 219 268 2.4E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS17735 a6873c386965404d7f0d3a9075f7cce7 271 Pfam PF12833 Helix-turn-helix domain 189 266 1.8E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS04040 bb3c93ce31ce43bf003571e0c53f1f23 252 PANTHER PTHR22726:SF4 1 249 2.6E-148 T 22-04-2016 APT61_RS04040 bb3c93ce31ce43bf003571e0c53f1f23 252 Pfam PF01435 Peptidase family M48 71 245 1.2E-26 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APT61_RS04040 bb3c93ce31ce43bf003571e0c53f1f23 252 PANTHER PTHR22726 1 249 2.6E-148 T 22-04-2016 APT61_RS04040 bb3c93ce31ce43bf003571e0c53f1f23 252 Gene3D G3DSA:3.30.2010.10 67 145 5.4E-23 T 22-04-2016 APT61_RS02925 b384ac7ab7ab7d5ae3e2e3d37769ceae 523 PANTHER PTHR30536:SF1 2 523 0.0 T 22-04-2016 APT61_RS02925 b384ac7ab7ab7d5ae3e2e3d37769ceae 523 PANTHER PTHR30536 2 523 0.0 T 22-04-2016 APT61_RS02925 b384ac7ab7ab7d5ae3e2e3d37769ceae 523 Hamap MF_02031 Galactarate dehydratase (L-threo-forming) [garD]. 2 523 80.11 T 22-04-2016 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497|UniPathway: UPA00565 APT61_RS02925 b384ac7ab7ab7d5ae3e2e3d37769ceae 523 SMART SM00858 22 92 3.2E-12 T 22-04-2016 IPR013974 SAF domain APT61_RS02925 b384ac7ab7ab7d5ae3e2e3d37769ceae 523 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 119 521 4.2E-144 T 22-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 APT61_RS02925 b384ac7ab7ab7d5ae3e2e3d37769ceae 523 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 15 523 5.6E-283 T 22-04-2016 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497|UniPathway: UPA00565 APT61_RS02925 b384ac7ab7ab7d5ae3e2e3d37769ceae 523 Pfam PF08666 SAF domain 22 90 2.5E-12 T 22-04-2016 IPR013974 SAF domain APT61_RS07060 3d2d2b1ac0ebecdca556310be3b7f138 165 Hamap MF_00706 Ecotin [eco]. 1 165 38.938 T 22-04-2016 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria APT61_RS07060 3d2d2b1ac0ebecdca556310be3b7f138 165 Gene3D G3DSA:4.10.1230.10 108 164 1.1E-28 T 22-04-2016 IPR027438 Ecotin, C-terminal APT61_RS07060 3d2d2b1ac0ebecdca556310be3b7f138 165 SUPERFAMILY SSF49772 29 163 8.11E-56 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain APT61_RS07060 3d2d2b1ac0ebecdca556310be3b7f138 165 PIRSF PIRSF006865 1 165 1.3E-64 T 22-04-2016 IPR005658 Proteinase inhibitor I11, ecotin APT61_RS07060 3d2d2b1ac0ebecdca556310be3b7f138 165 Gene3D G3DSA:2.60.40.550 27 107 2.7E-39 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain APT61_RS07060 3d2d2b1ac0ebecdca556310be3b7f138 165 Pfam PF03974 Ecotin 33 155 1.9E-52 T 22-04-2016 IPR023189 Proteinase inhibitor I11, ecotin domain APT61_RS07060 3d2d2b1ac0ebecdca556310be3b7f138 165 PANTHER PTHR35890:SF4 5 165 2.3E-88 T 22-04-2016 APT61_RS07060 3d2d2b1ac0ebecdca556310be3b7f138 165 PANTHER PTHR35890 5 165 2.3E-88 T 22-04-2016 APT61_RS11900 3228c92a7198a860f60b31a1e86a3f2c 671 Gene3D G3DSA:3.20.20.80 481 645 1.1E-4 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS11900 3228c92a7198a860f60b31a1e86a3f2c 671 PANTHER PTHR34216:SF2 462 647 1.7E-257 T 22-04-2016 APT61_RS11900 3228c92a7198a860f60b31a1e86a3f2c 671 PANTHER PTHR34216:SF2 11 308 1.7E-257 T 22-04-2016 APT61_RS11900 3228c92a7198a860f60b31a1e86a3f2c 671 Gene3D G3DSA:3.20.20.370 416 480 5.1E-30 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APT61_RS11900 3228c92a7198a860f60b31a1e86a3f2c 671 Gene3D G3DSA:3.20.20.370 77 270 5.1E-30 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APT61_RS11900 3228c92a7198a860f60b31a1e86a3f2c 671 SUPERFAMILY SSF88713 224 319 3.77E-36 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APT61_RS11900 3228c92a7198a860f60b31a1e86a3f2c 671 SUPERFAMILY SSF88713 66 196 3.77E-36 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APT61_RS11900 3228c92a7198a860f60b31a1e86a3f2c 671 TIGRFAM TIGR03938 deacetyl_PgaB: poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB 49 665 1.9E-267 T 22-04-2016 IPR023854 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB GO:0016810|GO:0042710 KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- APT61_RS11900 3228c92a7198a860f60b31a1e86a3f2c 671 PANTHER PTHR34216 462 647 1.7E-257 T 22-04-2016 APT61_RS11900 3228c92a7198a860f60b31a1e86a3f2c 671 PANTHER PTHR34216 11 308 1.7E-257 T 22-04-2016 APT61_RS11900 3228c92a7198a860f60b31a1e86a3f2c 671 Pfam PF01522 Polysaccharide deacetylase 103 270 2.5E-28 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APT61_RS11900 3228c92a7198a860f60b31a1e86a3f2c 671 Pfam PF14883 Hypothetical glycosyl hydrolase family 13 318 645 7.2E-145 T 22-04-2016 IPR032772 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB, C-terminal KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- APT61_RS11670 4d37a3af375bfafac882630fd76b83be 398 Pfam PF07690 Major Facilitator Superfamily 25 244 1.4E-24 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS11670 4d37a3af375bfafac882630fd76b83be 398 Gene3D G3DSA:1.20.1250.20 220 387 3.9E-9 T 22-04-2016 APT61_RS11670 4d37a3af375bfafac882630fd76b83be 398 SUPERFAMILY SSF103473 19 389 6.15E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11670 4d37a3af375bfafac882630fd76b83be 398 PANTHER PTHR23501 16 391 6.9E-70 T 22-04-2016 APT61_RS11670 4d37a3af375bfafac882630fd76b83be 398 Gene3D G3DSA:1.20.1250.20 21 200 6.9E-22 T 22-04-2016 APT61_RS11670 4d37a3af375bfafac882630fd76b83be 398 PANTHER PTHR23501:SF16 16 391 6.9E-70 T 22-04-2016 APT61_RS16735 92145c427d289132f341425cb024b62c 331 TIGRFAM TIGR02566 cas_Csy3: CRISPR type I-F/YPEST-associated protein Csy3 8 329 1.8E-135 T 22-04-2016 IPR013399 CRISPR-associated protein Csy3 APT61_RS16735 92145c427d289132f341425cb024b62c 331 Pfam PF09615 CRISPR-associated protein (Cas_Csy3) 9 327 4.9E-146 T 22-04-2016 IPR013399 CRISPR-associated protein Csy3 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 SUPERFAMILY SSF52313 6 235 2.35E-96 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 Pfam PF00318 Ribosomal protein S2 9 224 1.9E-94 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 Gene3D G3DSA:1.10.287.610 100 152 5.5E-27 T 22-04-2016 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 Gene3D G3DSA:3.40.50.10490 23 99 2.1E-67 T 22-04-2016 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 Gene3D G3DSA:3.40.50.10490 158 236 2.1E-67 T 22-04-2016 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 6.8E-109 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.369 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 8.8E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 8.8E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 8.8E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 8.8E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 8.8E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 8.8E-38 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 APT61_RS18260 cab3825b3670bc398d6d80222e78348c 241 PANTHER PTHR12534 1 235 7.0E-124 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 APT61_RS10625 5e56559f63ac19691657bd7deda2dacb 175 PANTHER PTHR10245:SF9 2 175 1.5E-61 T 22-04-2016 APT61_RS10625 5e56559f63ac19691657bd7deda2dacb 175 SMART SM00530 10 65 1.3E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS10625 5e56559f63ac19691657bd7deda2dacb 175 Gene3D G3DSA:2.60.120.10 83 175 9.2E-32 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS10625 5e56559f63ac19691657bd7deda2dacb 175 Pfam PF07883 Cupin domain 102 169 3.4E-10 T 22-04-2016 IPR013096 Cupin 2, conserved barrel APT61_RS10625 5e56559f63ac19691657bd7deda2dacb 175 SUPERFAMILY SSF51182 50 174 8.17E-24 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS10625 5e56559f63ac19691657bd7deda2dacb 175 PANTHER PTHR10245 2 175 1.5E-61 T 22-04-2016 APT61_RS10625 5e56559f63ac19691657bd7deda2dacb 175 SUPERFAMILY SSF47413 2 74 6.7E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS10625 5e56559f63ac19691657bd7deda2dacb 175 Gene3D G3DSA:1.10.260.40 2 76 4.1E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS10625 5e56559f63ac19691657bd7deda2dacb 175 Pfam PF01381 Helix-turn-helix 11 63 2.6E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS08205 b22f9a1a58fdc9b2310332bb17869cef 218 Pfam PF00072 Response regulator receiver domain 4 116 2.1E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS08205 b22f9a1a58fdc9b2310332bb17869cef 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 2.9E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08205 b22f9a1a58fdc9b2310332bb17869cef 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 7.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08205 b22f9a1a58fdc9b2310332bb17869cef 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 7.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08205 b22f9a1a58fdc9b2310332bb17869cef 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 7.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08205 b22f9a1a58fdc9b2310332bb17869cef 218 Gene3D G3DSA:3.40.50.2300 2 119 7.8E-34 T 22-04-2016 APT61_RS08205 b22f9a1a58fdc9b2310332bb17869cef 218 SMART SM00421 147 204 2.4E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08205 b22f9a1a58fdc9b2310332bb17869cef 218 SUPERFAMILY SSF52172 3 160 4.25E-33 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS08205 b22f9a1a58fdc9b2310332bb17869cef 218 Gene3D G3DSA:1.10.10.10 120 211 1.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS08205 b22f9a1a58fdc9b2310332bb17869cef 218 PANTHER PTHR26402 2 217 4.6E-115 T 22-04-2016 APT61_RS08205 b22f9a1a58fdc9b2310332bb17869cef 218 SUPERFAMILY SSF46894 147 210 2.55E-16 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS08205 b22f9a1a58fdc9b2310332bb17869cef 218 SMART SM00448 2 115 5.1E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS08205 b22f9a1a58fdc9b2310332bb17869cef 218 PANTHER PTHR26402:SF506 2 217 4.6E-115 T 22-04-2016 APT61_RS08205 b22f9a1a58fdc9b2310332bb17869cef 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS02055 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02055 45d53e98b9ae88d2567b52bea3a6f87c 103 PANTHER PTHR11700 1 102 1.1E-55 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APT61_RS02055 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.0E-35 T 22-04-2016 IPR027486 Ribosomal protein S10 domain APT61_RS02055 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 22-04-2016 IPR027486 Ribosomal protein S10 domain APT61_RS02055 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APT61_RS02055 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APT61_RS02055 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APT61_RS02055 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APT61_RS02055 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 22-04-2016 IPR027486 Ribosomal protein S10 domain APT61_RS02055 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 APT61_RS02055 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 3 102 8.7E-44 T 22-04-2016 IPR027486 Ribosomal protein S10 domain APT61_RS18875 00e7916534269aefb00e65d77c612529 428 SUPERFAMILY SSF54534 283 385 4.97E-32 T 22-04-2016 APT61_RS18875 00e7916534269aefb00e65d77c612529 428 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 212 232 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APT61_RS18875 00e7916534269aefb00e65d77c612529 428 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 321 342 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APT61_RS18875 00e7916534269aefb00e65d77c612529 428 Pfam PF09312 SurA N-terminal domain 25 142 7.1E-46 T 22-04-2016 IPR015391 SurA N-terminal APT61_RS18875 00e7916534269aefb00e65d77c612529 428 Pfam PF00639 PPIC-type PPIASE domain 289 380 2.1E-26 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APT61_RS18875 00e7916534269aefb00e65d77c612529 428 Pfam PF13616 PPIC-type PPIASE domain 162 272 7.0E-21 T 22-04-2016 APT61_RS18875 00e7916534269aefb00e65d77c612529 428 Gene3D G3DSA:3.10.50.40 282 406 6.3E-36 T 22-04-2016 APT61_RS18875 00e7916534269aefb00e65d77c612529 428 Gene3D G3DSA:3.10.50.40 166 277 1.6E-32 T 22-04-2016 APT61_RS18875 00e7916534269aefb00e65d77c612529 428 SUPERFAMILY SSF109998 25 200 8.24E-45 T 22-04-2016 IPR027304 Trigger factor/SurA domain APT61_RS18875 00e7916534269aefb00e65d77c612529 428 Gene3D G3DSA:1.10.3120.10 37 116 1.4E-5 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 APT61_RS18875 00e7916534269aefb00e65d77c612529 428 PANTHER PTHR10657 1 428 4.5E-170 T 22-04-2016 APT61_RS18875 00e7916534269aefb00e65d77c612529 428 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.174 T 22-04-2016 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 APT61_RS18875 00e7916534269aefb00e65d77c612529 428 PANTHER PTHR10657:SF15 1 428 4.5E-170 T 22-04-2016 APT61_RS18875 00e7916534269aefb00e65d77c612529 428 SUPERFAMILY SSF54534 173 275 2.09E-28 T 22-04-2016 APT61_RS08935 8e76543512ff95a4b0b8417b5ae9ac1a 304 Gene3D G3DSA:3.40.50.10740 3 160 2.3E-40 T 22-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain APT61_RS08935 8e76543512ff95a4b0b8417b5ae9ac1a 304 SUPERFAMILY SSF141986 138 287 4.45E-41 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain APT61_RS08935 8e76543512ff95a4b0b8417b5ae9ac1a 304 SUPERFAMILY SSF52317 3 160 5.04E-33 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS08935 8e76543512ff95a4b0b8417b5ae9ac1a 304 PIRSF PIRSF028757 1 300 2.0E-79 T 22-04-2016 IPR003507 Peptidase family S66 APT61_RS08935 8e76543512ff95a4b0b8417b5ae9ac1a 304 Pfam PF02016 LD-carboxypeptidase 4 285 4.5E-67 T 22-04-2016 IPR003507 Peptidase family S66 APT61_RS08935 8e76543512ff95a4b0b8417b5ae9ac1a 304 Gene3D G3DSA:3.50.30.60 169 289 2.1E-41 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain APT61_RS08935 8e76543512ff95a4b0b8417b5ae9ac1a 304 PANTHER PTHR30237 3 303 1.1E-106 T 22-04-2016 APT61_RS08935 8e76543512ff95a4b0b8417b5ae9ac1a 304 PANTHER PTHR30237:SF2 3 303 1.1E-106 T 22-04-2016 APT61_RS12650 20a47374c89c4a676c7244a5f9c26273 298 Pfam PF00248 Aldo/keto reductase family 18 291 5.3E-59 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS12650 20a47374c89c4a676c7244a5f9c26273 298 PANTHER PTHR11732:SF10 2 298 4.4E-166 T 22-04-2016 APT61_RS12650 20a47374c89c4a676c7244a5f9c26273 298 Gene3D G3DSA:3.20.20.100 2 292 4.5E-69 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS12650 20a47374c89c4a676c7244a5f9c26273 298 SUPERFAMILY SSF51430 3 295 2.75E-74 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS12650 20a47374c89c4a676c7244a5f9c26273 298 PANTHER PTHR11732 2 298 4.4E-166 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS12650 20a47374c89c4a676c7244a5f9c26273 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 2.6E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS12650 20a47374c89c4a676c7244a5f9c26273 298 PRINTS PR00069 Aldo-keto reductase signature 225 249 2.6E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS12650 20a47374c89c4a676c7244a5f9c26273 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 2.6E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS08875 9eed42e79db859b2b63097031405803d 270 PANTHER PTHR13696:SF1 1 258 5.6E-96 T 22-04-2016 APT61_RS08875 9eed42e79db859b2b63097031405803d 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 1.3E-111 T 22-04-2016 IPR010223 ATP binding protein MinD, bacterial-type GO:0000918|GO:0016887 APT61_RS08875 9eed42e79db859b2b63097031405803d 270 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 217 1.9E-29 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain APT61_RS08875 9eed42e79db859b2b63097031405803d 270 Gene3D G3DSA:3.40.50.300 1 248 1.5E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08875 9eed42e79db859b2b63097031405803d 270 SUPERFAMILY SSF52540 1 268 4.18E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08875 9eed42e79db859b2b63097031405803d 270 PANTHER PTHR13696 1 258 5.6E-96 T 22-04-2016 APT61_RS08875 9eed42e79db859b2b63097031405803d 270 PIRSF PIRSF003092 1 270 3.1E-100 T 22-04-2016 IPR025501 ATP binding protein MinD APT61_RS05730 7558618783701bca8ca71926999e9395 139 PANTHER PTHR10438 11 139 5.5E-64 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APT61_RS05730 7558618783701bca8ca71926999e9395 139 PANTHER PTHR10438:SF266 11 139 5.5E-64 T 22-04-2016 APT61_RS05730 7558618783701bca8ca71926999e9395 139 PRINTS PR00421 Thioredoxin family signature 55 63 6.5E-9 T 22-04-2016 APT61_RS05730 7558618783701bca8ca71926999e9395 139 PRINTS PR00421 Thioredoxin family signature 103 114 6.5E-9 T 22-04-2016 APT61_RS05730 7558618783701bca8ca71926999e9395 139 PRINTS PR00421 Thioredoxin family signature 63 72 6.5E-9 T 22-04-2016 APT61_RS05730 7558618783701bca8ca71926999e9395 139 Gene3D G3DSA:3.40.30.10 32 138 2.1E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS05730 7558618783701bca8ca71926999e9395 139 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APT61_RS05730 7558618783701bca8ca71926999e9395 139 TIGRFAM TIGR01068 thioredoxin: thioredoxin 46 138 3.9E-36 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APT61_RS05730 7558618783701bca8ca71926999e9395 139 Pfam PF00085 Thioredoxin 38 137 4.4E-27 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 APT61_RS05730 7558618783701bca8ca71926999e9395 139 SUPERFAMILY SSF52833 25 138 3.57E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS08385 f3fe408f290e771fa631fa259d127d61 474 Gene3D G3DSA:3.40.50.2000 244 436 6.2E-76 T 22-04-2016 APT61_RS08385 f3fe408f290e771fa631fa259d127d61 474 PANTHER PTHR10788:SF6 3 473 5.0E-202 T 22-04-2016 APT61_RS08385 f3fe408f290e771fa631fa259d127d61 474 Gene3D G3DSA:3.40.50.2000 2 239 7.3E-74 T 22-04-2016 APT61_RS08385 f3fe408f290e771fa631fa259d127d61 474 SUPERFAMILY SSF53756 2 454 3.89E-150 T 22-04-2016 APT61_RS08385 f3fe408f290e771fa631fa259d127d61 474 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 452 2.3E-183 T 22-04-2016 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 APT61_RS08385 f3fe408f290e771fa631fa259d127d61 474 PANTHER PTHR10788 3 473 5.0E-202 T 22-04-2016 APT61_RS08385 f3fe408f290e771fa631fa259d127d61 474 Pfam PF00982 Glycosyltransferase family 20 17 452 1.0E-145 T 22-04-2016 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 APT61_RS20755 d9b0f2b92be461e80be5d25fbaef77a7 243 SUPERFAMILY SSF46894 136 233 1.22E-24 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS20755 d9b0f2b92be461e80be5d25fbaef77a7 243 SUPERFAMILY SSF52172 2 127 2.7E-38 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS20755 d9b0f2b92be461e80be5d25fbaef77a7 243 SMART SM00862 156 232 1.1E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS20755 d9b0f2b92be461e80be5d25fbaef77a7 243 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 232 2.2E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS20755 d9b0f2b92be461e80be5d25fbaef77a7 243 Gene3D G3DSA:3.40.50.2300 2 126 5.9E-40 T 22-04-2016 APT61_RS20755 d9b0f2b92be461e80be5d25fbaef77a7 243 PANTHER PTHR26402:SF292 3 236 1.1E-73 T 22-04-2016 APT61_RS20755 d9b0f2b92be461e80be5d25fbaef77a7 243 SMART SM00448 3 115 5.6E-40 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS20755 d9b0f2b92be461e80be5d25fbaef77a7 243 PANTHER PTHR26402 3 236 1.1E-73 T 22-04-2016 APT61_RS20755 d9b0f2b92be461e80be5d25fbaef77a7 243 Pfam PF00072 Response regulator receiver domain 5 115 5.5E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS20755 d9b0f2b92be461e80be5d25fbaef77a7 243 Gene3D G3DSA:1.10.10.10 137 235 5.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01345 7ea6ee30cea0c1da80646b895c2a9157 157 Gene3D G3DSA:3.10.129.10 6 139 9.5E-17 T 22-04-2016 IPR029069 HotDog domain APT61_RS01345 7ea6ee30cea0c1da80646b895c2a9157 157 Pfam PF07977 FabA-like domain 52 121 5.2E-5 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APT61_RS01345 7ea6ee30cea0c1da80646b895c2a9157 157 PIRSF PIRSF020565 1 156 2.8E-46 T 22-04-2016 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted APT61_RS01345 7ea6ee30cea0c1da80646b895c2a9157 157 SUPERFAMILY SSF54637 8 144 3.56E-21 T 22-04-2016 IPR029069 HotDog domain APT61_RS02970 49d42bbf3c7bc81b7a4d3fd3661b3a5a 329 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APT61_RS02970 49d42bbf3c7bc81b7a4d3fd3661b3a5a 329 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 312 6.8E-79 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS02970 49d42bbf3c7bc81b7a4d3fd3661b3a5a 329 SUPERFAMILY SSF53686 10 321 4.71E-94 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS02970 49d42bbf3c7bc81b7a4d3fd3661b3a5a 329 PANTHER PTHR10314:SF17 9 323 2.7E-149 T 22-04-2016 APT61_RS02970 49d42bbf3c7bc81b7a4d3fd3661b3a5a 329 PANTHER PTHR10314 9 323 2.7E-149 T 22-04-2016 APT61_RS02970 49d42bbf3c7bc81b7a4d3fd3661b3a5a 329 Gene3D G3DSA:3.40.50.1100 76 323 8.4E-75 T 22-04-2016 APT61_RS02970 49d42bbf3c7bc81b7a4d3fd3661b3a5a 329 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 28 323 1.9E-115 T 22-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 PANTHER PTHR22912 5 367 4.4E-151 T 22-04-2016 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 2.5E-18 T 22-04-2016 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 2.5E-18 T 22-04-2016 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.5E-18 T 22-04-2016 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 2.5E-18 T 22-04-2016 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 2.5E-18 T 22-04-2016 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 Hamap MF_01313 Nitric oxide reductase FlRd-NAD(+) reductase [norW]. 1 377 54.649 T 22-04-2016 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase GO:0016731|GO:0055114 UniPathway: UPA00638 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 278 7.7E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 Gene3D G3DSA:3.50.50.60 106 300 8.6E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 Gene3D G3DSA:3.50.50.60 3 105 9.2E-18 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.9E-12 T 22-04-2016 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 275 1.9E-12 T 22-04-2016 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 1.9E-12 T 22-04-2016 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 229 243 1.9E-12 T 22-04-2016 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 PANTHER PTHR22912:SF130 5 367 4.4E-151 T 22-04-2016 APT61_RS04820 1391c4aa9a8bf5e493a630cd4849fcb1 377 SUPERFAMILY SSF51905 4 301 2.1E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01940 f16a6c4b7b86547f0009e106e8e49b61 266 Gene3D G3DSA:3.90.226.10 34 199 2.8E-15 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS01940 f16a6c4b7b86547f0009e106e8e49b61 266 TIGRFAM TIGR03134 malonate_gamma: biotin-independent malonate decarboxylase, gamma subunit 8 266 2.5E-96 T 22-04-2016 IPR009648 Biotin-dependent malonate decarboxylase, gamma subunit GO:0044262 MetaCyc: PWY-6060 APT61_RS01940 f16a6c4b7b86547f0009e106e8e49b61 266 SUPERFAMILY SSF52096 21 235 1.74E-22 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS01940 f16a6c4b7b86547f0009e106e8e49b61 266 Pfam PF06833 Malonate decarboxylase gamma subunit (MdcE) 11 266 3.9E-95 T 22-04-2016 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal GO:0016874 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS17940 3638348ea1fda800573e86fa3f7ea3d3 152 PANTHER PTHR39563 2 152 1.3E-116 T 22-04-2016 APT61_RS17940 3638348ea1fda800573e86fa3f7ea3d3 152 SUPERFAMILY SSF53271 4 144 4.33E-32 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS17940 3638348ea1fda800573e86fa3f7ea3d3 152 Pfam PF00156 Phosphoribosyl transferase domain 10 144 2.7E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APT61_RS17940 3638348ea1fda800573e86fa3f7ea3d3 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.452 T 22-04-2016 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 APT61_RS17940 3638348ea1fda800573e86fa3f7ea3d3 152 Gene3D G3DSA:3.40.50.2020 1 145 1.1E-44 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS17430 0fa1ae1dd911221fa6c8ef0e8d906c67 367 SUPERFAMILY SSF53597 144 362 1.1E-56 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain APT61_RS17430 0fa1ae1dd911221fa6c8ef0e8d906c67 367 Gene3D G3DSA:3.40.430.10 129 363 4.0E-69 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain APT61_RS17430 0fa1ae1dd911221fa6c8ef0e8d906c67 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 365 1.1E-77 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 APT61_RS17430 0fa1ae1dd911221fa6c8ef0e8d906c67 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 362 1.8E-153 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 APT61_RS17430 0fa1ae1dd911221fa6c8ef0e8d906c67 367 SUPERFAMILY SSF53927 3 145 5.02E-50 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APT61_RS17430 0fa1ae1dd911221fa6c8ef0e8d906c67 367 PANTHER PTHR11079:SF10 2 217 5.3E-73 T 22-04-2016 APT61_RS17430 0fa1ae1dd911221fa6c8ef0e8d906c67 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 99 6.4E-22 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APT61_RS17430 0fa1ae1dd911221fa6c8ef0e8d906c67 367 Gene3D G3DSA:3.40.140.10 2 128 2.7E-36 T 22-04-2016 APT61_RS17430 0fa1ae1dd911221fa6c8ef0e8d906c67 367 PIRSF PIRSF006769 1 367 6.9E-138 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 APT61_RS17430 0fa1ae1dd911221fa6c8ef0e8d906c67 367 Pfam PF01872 RibD C-terminal domain 147 362 2.1E-58 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 APT61_RS17430 0fa1ae1dd911221fa6c8ef0e8d906c67 367 PANTHER PTHR11079 2 217 5.3E-73 T 22-04-2016 APT61_RS17430 0fa1ae1dd911221fa6c8ef0e8d906c67 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APT61_RS05395 a8d930ca52b11152b943afde86ae2c1e 262 SUPERFAMILY SSF56112 14 252 2.21E-17 T 22-04-2016 IPR011009 Protein kinase-like domain APT61_RS05395 a8d930ca52b11152b943afde86ae2c1e 262 Pfam PF01636 Phosphotransferase enzyme family 30 202 4.0E-9 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase APT61_RS05395 a8d930ca52b11152b943afde86ae2c1e 262 Gene3D G3DSA:3.90.1200.10 81 249 8.1E-8 T 22-04-2016 APT61_RS15730 e1d63427f27ee0285b08a4d858e2ae48 329 PANTHER PTHR33420 194 329 4.9E-16 T 22-04-2016 APT61_RS15730 e1d63427f27ee0285b08a4d858e2ae48 329 Gene3D G3DSA:2.60.40.1090 194 329 8.7E-23 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APT61_RS15730 e1d63427f27ee0285b08a4d858e2ae48 329 Pfam PF00419 Fimbrial protein 185 328 1.7E-13 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APT61_RS15730 e1d63427f27ee0285b08a4d858e2ae48 329 SUPERFAMILY SSF49401 26 160 6.96E-5 T 22-04-2016 IPR008966 Adhesion domain APT61_RS15730 e1d63427f27ee0285b08a4d858e2ae48 329 SUPERFAMILY SSF49401 194 329 5.47E-21 T 22-04-2016 IPR008966 Adhesion domain APT61_RS03920 c089e874ee3e2d6ed5fed4763f040a97 359 PANTHER PTHR21666 175 359 2.2E-54 T 22-04-2016 APT61_RS03920 c089e874ee3e2d6ed5fed4763f040a97 359 SUPERFAMILY SSF53955 191 357 2.2E-35 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS03920 c089e874ee3e2d6ed5fed4763f040a97 359 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 213 241 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APT61_RS03920 c089e874ee3e2d6ed5fed4763f040a97 359 Pfam PF01464 Transglycosylase SLT domain 196 319 2.3E-31 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 APT61_RS03920 c089e874ee3e2d6ed5fed4763f040a97 359 PANTHER PTHR21666:SF224 175 359 2.2E-54 T 22-04-2016 APT61_RS03920 c089e874ee3e2d6ed5fed4763f040a97 359 Pfam PF11873 Domain of unknown function (DUF3393) 3 191 2.2E-75 T 22-04-2016 IPR024570 Murein transglycosylase-C, N-terminal APT61_RS03920 c089e874ee3e2d6ed5fed4763f040a97 359 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 358 64.944 T 22-04-2016 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 APT61_RS03920 c089e874ee3e2d6ed5fed4763f040a97 359 Gene3D G3DSA:1.10.530.10 187 358 2.9E-40 T 22-04-2016 APT61_RS12360 a9c1fb531aec47be3ca3b607f82f3e45 329 PANTHER PTHR41328:SF2 71 150 3.1E-16 T 22-04-2016 APT61_RS12360 a9c1fb531aec47be3ca3b607f82f3e45 329 PANTHER PTHR41328 71 150 3.1E-16 T 22-04-2016 APT61_RS12360 a9c1fb531aec47be3ca3b607f82f3e45 329 Pfam PF03592 Terminase small subunit 73 282 4.9E-30 T 22-04-2016 IPR005335 Terminase small subunit GO:0006323 APT61_RS07440 2c0ed152fe7564b5376943e8020124b8 488 PANTHER PTHR11999:SF106 7 485 9.1E-199 T 22-04-2016 APT61_RS07440 2c0ed152fe7564b5376943e8020124b8 488 SUPERFAMILY SSF53383 15 485 7.69E-121 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS07440 2c0ed152fe7564b5376943e8020124b8 488 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 73 416 5.4E-62 T 22-04-2016 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 APT61_RS07440 2c0ed152fe7564b5376943e8020124b8 488 Gene3D G3DSA:3.40.640.10 93 369 3.1E-98 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS07440 2c0ed152fe7564b5376943e8020124b8 488 Gene3D G3DSA:1.20.1650.10 11 81 1.6E-5 T 22-04-2016 APT61_RS07440 2c0ed152fe7564b5376943e8020124b8 488 Gene3D G3DSA:3.90.1150.10 370 485 4.5E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS07440 2c0ed152fe7564b5376943e8020124b8 488 PANTHER PTHR11999 7 485 9.1E-199 T 22-04-2016 APT61_RS07100 d3b6ee98076b13112ff796a31b3df45e 94 PANTHER PTHR33284 1 94 6.1E-41 T 22-04-2016 APT61_RS07100 d3b6ee98076b13112ff796a31b3df45e 94 SUPERFAMILY SSF50715 1 93 2.96E-31 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 APT61_RS07100 d3b6ee98076b13112ff796a31b3df45e 94 Pfam PF01386 Ribosomal L25p family 4 91 9.0E-25 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APT61_RS07100 d3b6ee98076b13112ff796a31b3df45e 94 Gene3D G3DSA:2.40.240.10 2 93 1.2E-34 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APT61_RS07100 d3b6ee98076b13112ff796a31b3df45e 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 28.076 T 22-04-2016 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 APT61_RS07100 d3b6ee98076b13112ff796a31b3df45e 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 7 93 3.0E-36 T 22-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 APT61_RS22195 ad01e2f5cfe7656eb985a01ddd43645d 139 PANTHER PTHR13822 1 139 2.3E-49 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22195 ad01e2f5cfe7656eb985a01ddd43645d 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 5.0E-39 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22195 ad01e2f5cfe7656eb985a01ddd43645d 139 SUPERFAMILY SSF51344 3 86 3.66E-24 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22195 ad01e2f5cfe7656eb985a01ddd43645d 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 3.1E-29 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22195 ad01e2f5cfe7656eb985a01ddd43645d 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.684 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22195 ad01e2f5cfe7656eb985a01ddd43645d 139 Gene3D G3DSA:2.60.15.10 3 91 2.3E-29 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22195 ad01e2f5cfe7656eb985a01ddd43645d 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 3.1E-46 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22195 ad01e2f5cfe7656eb985a01ddd43645d 139 Gene3D G3DSA:1.20.5.440 92 134 2.2E-24 T 22-04-2016 APT61_RS22195 ad01e2f5cfe7656eb985a01ddd43645d 139 SUPERFAMILY SSF46604 88 137 1.83E-15 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain APT61_RS22195 ad01e2f5cfe7656eb985a01ddd43645d 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 3.9E-13 T 22-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain APT61_RS15285 2a31529b8f6b9139cdd2c70d42829152 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 4 241 2.6E-89 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 APT61_RS15285 2a31529b8f6b9139cdd2c70d42829152 243 SMART SM00079 22 243 0.0029 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 APT61_RS15285 2a31529b8f6b9139cdd2c70d42829152 243 PANTHER PTHR18966:SF194 23 241 2.6E-102 T 22-04-2016 APT61_RS15285 2a31529b8f6b9139cdd2c70d42829152 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 1.9E-69 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS15285 2a31529b8f6b9139cdd2c70d42829152 243 SMART SM00062 22 242 3.6E-85 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS15285 2a31529b8f6b9139cdd2c70d42829152 243 Gene3D G3DSA:3.40.190.10 20 108 1.9E-43 T 22-04-2016 APT61_RS15285 2a31529b8f6b9139cdd2c70d42829152 243 Gene3D G3DSA:3.40.190.10 203 242 1.9E-43 T 22-04-2016 APT61_RS15285 2a31529b8f6b9139cdd2c70d42829152 243 SUPERFAMILY SSF53850 1 242 4.95E-72 T 22-04-2016 APT61_RS15285 2a31529b8f6b9139cdd2c70d42829152 243 PANTHER PTHR18966 23 241 2.6E-102 T 22-04-2016 APT61_RS15285 2a31529b8f6b9139cdd2c70d42829152 243 Gene3D G3DSA:3.40.190.10 109 201 2.1E-28 T 22-04-2016 APT61_RS04670 43e1fc924abfae55dab41104e8d403c5 163 PANTHER PTHR34319:SF2 1 163 9.0E-92 T 22-04-2016 APT61_RS04670 43e1fc924abfae55dab41104e8d403c5 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 1.6E-48 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS04670 43e1fc924abfae55dab41104e8d403c5 163 PANTHER PTHR34319 1 163 9.0E-92 T 22-04-2016 APT61_RS04670 43e1fc924abfae55dab41104e8d403c5 163 Gene3D G3DSA:2.30.110.20 1 159 3.8E-34 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS04670 43e1fc924abfae55dab41104e8d403c5 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 1.3E-37 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS04670 43e1fc924abfae55dab41104e8d403c5 163 SUPERFAMILY SSF141452 3 161 5.1E-45 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS15745 ccf2249569f767f89187a38a0294fbb5 454 PANTHER PTHR24031 1 454 1.6E-197 T 22-04-2016 APT61_RS15745 ccf2249569f767f89187a38a0294fbb5 454 Gene3D G3DSA:3.40.50.300 214 373 1.4E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15745 ccf2249569f767f89187a38a0294fbb5 454 SMART SM00490 259 340 7.6E-32 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS15745 ccf2249569f767f89187a38a0294fbb5 454 Gene3D G3DSA:3.40.50.300 1 213 1.7E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15745 ccf2249569f767f89187a38a0294fbb5 454 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APT61_RS15745 ccf2249569f767f89187a38a0294fbb5 454 PANTHER PTHR24031:SF0 1 454 1.6E-197 T 22-04-2016 APT61_RS15745 ccf2249569f767f89187a38a0294fbb5 454 SMART SM00487 20 223 6.4E-63 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS15745 ccf2249569f767f89187a38a0294fbb5 454 Pfam PF00271 Helicase conserved C-terminal domain 235 339 5.4E-26 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS15745 ccf2249569f767f89187a38a0294fbb5 454 SUPERFAMILY SSF52540 75 361 1.9E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15745 ccf2249569f767f89187a38a0294fbb5 454 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 450 52.234 T 22-04-2016 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 APT61_RS15745 ccf2249569f767f89187a38a0294fbb5 454 Pfam PF00270 DEAD/DEAH box helicase 25 195 1.6E-49 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 Pfam PF14842 FliG N-terminal domain 3 103 2.1E-29 T 22-04-2016 IPR028263 Flagellar motor switch protein FliG, N-terminal domain APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 PIRSF PIRSF003161 1 331 3.5E-117 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 PANTHER PTHR30534 1 331 7.8E-112 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 SUPERFAMILY SSF48029 5 104 4.18E-18 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 331 9.3E-151 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 Pfam PF14841 FliG middle domain 115 186 6.0E-24 T 22-04-2016 IPR032779 Flagellar motor switch protein FliG, middle domain APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 SUPERFAMILY SSF48029 114 323 1.31E-62 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 4 20 4.6E-75 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 194 219 4.6E-75 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 225 245 4.6E-75 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 271 297 4.6E-75 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 114 137 4.6E-75 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 247 267 4.6E-75 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 PRINTS PR00954 Flagellar motor switch protein FliG signature 33 59 4.6E-75 T 22-04-2016 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 PANTHER PTHR30534:SF0 1 331 7.8E-112 T 22-04-2016 APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 Gene3D G3DSA:1.10.220.30 8 71 1.1E-14 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 Gene3D G3DSA:1.10.220.30 74 183 9.2E-28 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 Gene3D G3DSA:1.10.220.30 194 330 4.9E-40 T 22-04-2016 IPR011002 Flagellar motor switch protein FliG, alpha-helical APT61_RS08100 2d9342425821bd5145e5b569c37fe8c7 331 Pfam PF01706 FliG C-terminal domain 218 322 2.1E-37 T 22-04-2016 IPR023087 Flagellar motor switch protein FliG, C-terminal APT61_RS15670 e5aebb3607fe7344c490ac52ea3d82b7 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS15670 e5aebb3607fe7344c490ac52ea3d82b7 240 PANTHER PTHR24220:SF569 3 239 1.9E-171 T 22-04-2016 APT61_RS15670 e5aebb3607fe7344c490ac52ea3d82b7 240 PANTHER PTHR24220 3 239 1.9E-171 T 22-04-2016 APT61_RS15670 e5aebb3607fe7344c490ac52ea3d82b7 240 Pfam PF00005 ABC transporter 17 165 4.2E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15670 e5aebb3607fe7344c490ac52ea3d82b7 240 SUPERFAMILY SSF52540 1 235 1.39E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15670 e5aebb3607fe7344c490ac52ea3d82b7 240 Gene3D G3DSA:3.40.50.300 1 237 1.2E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15670 e5aebb3607fe7344c490ac52ea3d82b7 240 SMART SM00382 26 213 2.2E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15670 e5aebb3607fe7344c490ac52ea3d82b7 240 PIRSF PIRSF039085 1 240 1.0E-108 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APT61_RS07355 db5a71238b76410f9ffb6eb3ead1929d 184 PANTHER PTHR23091 14 177 2.2E-28 T 22-04-2016 APT61_RS07355 db5a71238b76410f9ffb6eb3ead1929d 184 Gene3D G3DSA:3.40.630.30 11 178 1.5E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS07355 db5a71238b76410f9ffb6eb3ead1929d 184 Pfam PF13420 Acetyltransferase (GNAT) domain 14 169 3.8E-16 T 22-04-2016 APT61_RS07355 db5a71238b76410f9ffb6eb3ead1929d 184 SUPERFAMILY SSF55729 10 177 1.59E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS07355 db5a71238b76410f9ffb6eb3ead1929d 184 PANTHER PTHR23091:SF187 14 177 2.2E-28 T 22-04-2016 APT61_RS00330 44453cf6e479b78494abf4c4cd8a69a7 309 PIRSF PIRSF018296 1 309 1.0E-135 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APT61_RS00330 44453cf6e479b78494abf4c4cd8a69a7 309 PANTHER PTHR37689 4 309 7.9E-116 T 22-04-2016 APT61_RS00330 44453cf6e479b78494abf4c4cd8a69a7 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 22 304 3.0E-116 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APT61_RS00330 44453cf6e479b78494abf4c4cd8a69a7 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 305 7.2E-149 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APT61_RS00330 44453cf6e479b78494abf4c4cd8a69a7 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 306 49.709 T 22-04-2016 IPR006452 Formate dehydrogenase accessory protein GO:0005737 APT61_RS00330 44453cf6e479b78494abf4c4cd8a69a7 309 PANTHER PTHR37689:SF1 4 309 7.9E-116 T 22-04-2016 APT61_RS00330 44453cf6e479b78494abf4c4cd8a69a7 309 Gene3D G3DSA:3.90.1670.10 24 307 3.0E-111 T 22-04-2016 IPR024064 FdhE-like APT61_RS00330 44453cf6e479b78494abf4c4cd8a69a7 309 SUPERFAMILY SSF144020 24 306 1.57E-98 T 22-04-2016 IPR024064 FdhE-like APT61_RS06830 e205bc26d80a028a1c7a7bf8aebaea18 146 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 28 125 2.1E-31 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 APT61_RS06830 e205bc26d80a028a1c7a7bf8aebaea18 146 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 126 19.908 T 22-04-2016 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 APT61_RS06830 e205bc26d80a028a1c7a7bf8aebaea18 146 PANTHER PTHR11058:SF5 2 129 7.2E-75 T 22-04-2016 APT61_RS06830 e205bc26d80a028a1c7a7bf8aebaea18 146 PANTHER PTHR11058 2 129 7.2E-75 T 22-04-2016 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 APT61_RS10630 81dda0f811b58664124a7941ecb6ed32 654 PANTHER PTHR30217 1 652 1.8E-272 T 22-04-2016 APT61_RS10630 81dda0f811b58664124a7941ecb6ed32 654 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS10630 81dda0f811b58664124a7941ecb6ed32 654 Pfam PF01136 Peptidase family U32 79 305 1.9E-70 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS10630 81dda0f811b58664124a7941ecb6ed32 654 Pfam PF12392 Collagenase 391 505 1.0E-17 T 22-04-2016 IPR020988 Peptidase U32, collagenase KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS10630 81dda0f811b58664124a7941ecb6ed32 654 PANTHER PTHR30217:SF10 1 652 1.8E-272 T 22-04-2016 APT61_RS02905 f11b8c1f9586b9794f5ade1bc23e6818 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 62.31 T 22-04-2016 IPR023070 DnaA initiator-associating protein APT61_RS02905 f11b8c1f9586b9794f5ade1bc23e6818 196 PANTHER PTHR30390 1 196 2.1E-134 T 22-04-2016 APT61_RS02905 f11b8c1f9586b9794f5ade1bc23e6818 196 SUPERFAMILY SSF53697 4 191 5.66E-51 T 22-04-2016 APT61_RS02905 f11b8c1f9586b9794f5ade1bc23e6818 196 PANTHER PTHR30390:SF5 1 196 2.1E-134 T 22-04-2016 APT61_RS02905 f11b8c1f9586b9794f5ade1bc23e6818 196 Gene3D G3DSA:3.40.50.10490 3 191 2.5E-55 T 22-04-2016 APT61_RS02905 f11b8c1f9586b9794f5ade1bc23e6818 196 Pfam PF13580 SIS domain 9 144 6.7E-33 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APT61_RS11845 0f80ac3e6795d2b860401884a556f5fc 149 SUPERFAMILY SSF69118 3 144 3.29E-37 T 22-04-2016 IPR029032 AhpD-like APT61_RS11845 0f80ac3e6795d2b860401884a556f5fc 149 Pfam PF02627 Carboxymuconolactone decarboxylase family 18 95 1.3E-13 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS11845 0f80ac3e6795d2b860401884a556f5fc 149 Gene3D G3DSA:1.20.1290.10 2 145 5.6E-41 T 22-04-2016 IPR029032 AhpD-like APT61_RS11845 0f80ac3e6795d2b860401884a556f5fc 149 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 31 76 1.4E-11 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS00765 a48a2cb53f16cb0eccdb67c8c652cf35 273 SUPERFAMILY SSF53850 89 261 7.96E-17 T 22-04-2016 APT61_RS00765 a48a2cb53f16cb0eccdb67c8c652cf35 273 SUPERFAMILY SSF46785 2 85 2.25E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00765 a48a2cb53f16cb0eccdb67c8c652cf35 273 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 4.3E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS00765 a48a2cb53f16cb0eccdb67c8c652cf35 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS00765 a48a2cb53f16cb0eccdb67c8c652cf35 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS00765 a48a2cb53f16cb0eccdb67c8c652cf35 273 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.8E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS00765 a48a2cb53f16cb0eccdb67c8c652cf35 273 PANTHER PTHR30579 1 269 7.9E-95 T 22-04-2016 APT61_RS00765 a48a2cb53f16cb0eccdb67c8c652cf35 273 Pfam PF03466 LysR substrate binding domain 88 267 1.0E-14 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS00765 a48a2cb53f16cb0eccdb67c8c652cf35 273 Gene3D G3DSA:1.10.10.10 2 85 3.1E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00765 a48a2cb53f16cb0eccdb67c8c652cf35 273 PANTHER PTHR30579:SF0 1 269 7.9E-95 T 22-04-2016 APT61_RS00765 a48a2cb53f16cb0eccdb67c8c652cf35 273 Gene3D G3DSA:3.40.190.10 90 173 2.7E-9 T 22-04-2016 APT61_RS01710 146cf90087a5fe68f1bee60552b1ba59 78 Gene3D G3DSA:1.10.10.10 8 74 1.5E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01710 146cf90087a5fe68f1bee60552b1ba59 78 SUPERFAMILY SSF46785 1 76 7.06E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01710 146cf90087a5fe68f1bee60552b1ba59 78 Hamap MF_01586 Ferrous iron transport protein C [feoC]. 1 78 28.325 T 22-04-2016 IPR023732 Probable [Fe-S]-dependent transcriptional repressor APT61_RS01710 146cf90087a5fe68f1bee60552b1ba59 78 Pfam PF09012 FeoC like transcriptional regulator 3 69 5.8E-17 T 22-04-2016 IPR015102 Transcriptional regulator HTH-type, FeoC APT61_RS05140 94f24ad1097635c048a33fee87f602cb 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 65 3.5E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS05140 94f24ad1097635c048a33fee87f602cb 309 PANTHER PTHR30126:SF18 4 277 1.3E-116 T 22-04-2016 APT61_RS05140 94f24ad1097635c048a33fee87f602cb 309 Gene3D G3DSA:1.10.10.10 8 84 2.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05140 94f24ad1097635c048a33fee87f602cb 309 Gene3D G3DSA:3.40.190.10 183 259 1.6E-5 T 22-04-2016 APT61_RS05140 94f24ad1097635c048a33fee87f602cb 309 SUPERFAMILY SSF46785 8 90 1.36E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05140 94f24ad1097635c048a33fee87f602cb 309 Gene3D G3DSA:3.40.190.10 107 182 6.8E-7 T 22-04-2016 APT61_RS05140 94f24ad1097635c048a33fee87f602cb 309 Pfam PF03466 LysR substrate binding domain 91 280 2.4E-20 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS05140 94f24ad1097635c048a33fee87f602cb 309 SUPERFAMILY SSF53850 91 294 4.89E-21 T 22-04-2016 APT61_RS05140 94f24ad1097635c048a33fee87f602cb 309 PANTHER PTHR30126 4 277 1.3E-116 T 22-04-2016 APT61_RS05245 d9d2bb4e00ab0aafc0f0827eb9cd75e6 169 Pfam PF10004 Uncharacterized protein conserved in bacteria (DUF2247) 8 162 1.6E-50 T 22-04-2016 IPR016630 Uncharacterised conserved protein UCP015278 APT61_RS05245 d9d2bb4e00ab0aafc0f0827eb9cd75e6 169 PIRSF PIRSF015278 1 169 1.7E-47 T 22-04-2016 IPR016630 Uncharacterised conserved protein UCP015278 APT61_RS06535 5f7ec352c289781d3cc9fc4f7effad6e 648 Gene3D G3DSA:3.20.20.450 411 642 3.0E-36 T 22-04-2016 IPR001633 EAL domain APT61_RS06535 5f7ec352c289781d3cc9fc4f7effad6e 648 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 233 388 9.8E-11 T 22-04-2016 IPR000160 GGDEF domain APT61_RS06535 5f7ec352c289781d3cc9fc4f7effad6e 648 PANTHER PTHR33121 414 630 5.6E-26 T 22-04-2016 APT61_RS06535 5f7ec352c289781d3cc9fc4f7effad6e 648 SMART SM00267 225 394 6.6E-13 T 22-04-2016 IPR000160 GGDEF domain APT61_RS06535 5f7ec352c289781d3cc9fc4f7effad6e 648 SUPERFAMILY SSF55073 241 387 4.16E-16 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS06535 5f7ec352c289781d3cc9fc4f7effad6e 648 Gene3D G3DSA:3.30.70.270 237 391 4.2E-22 T 22-04-2016 APT61_RS06535 5f7ec352c289781d3cc9fc4f7effad6e 648 PANTHER PTHR33121:SF10 414 630 5.6E-26 T 22-04-2016 APT61_RS06535 5f7ec352c289781d3cc9fc4f7effad6e 648 SUPERFAMILY SSF141868 414 642 1.44E-39 T 22-04-2016 IPR001633 EAL domain APT61_RS06535 5f7ec352c289781d3cc9fc4f7effad6e 648 Pfam PF00563 EAL domain 416 640 2.1E-41 T 22-04-2016 IPR001633 EAL domain APT61_RS06535 5f7ec352c289781d3cc9fc4f7effad6e 648 Pfam PF00990 Diguanylate cyclase, GGDEF domain 236 391 1.6E-21 T 22-04-2016 IPR000160 GGDEF domain APT61_RS06535 5f7ec352c289781d3cc9fc4f7effad6e 648 Pfam PF16448 LapD/MoxY periplasmic domain 23 145 1.2E-38 T 22-04-2016 IPR032244 LapD/MoxY, periplasmic domain APT61_RS06535 5f7ec352c289781d3cc9fc4f7effad6e 648 SMART SM00052 407 647 7.8E-12 T 22-04-2016 IPR001633 EAL domain APT61_RS19735 0af01c52b84056534a89b13c16db01e1 651 Gene3D G3DSA:3.40.50.300 380 551 8.2E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19735 0af01c52b84056534a89b13c16db01e1 651 SMART SM00382 386 550 1.2E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS19735 0af01c52b84056534a89b13c16db01e1 651 SUPERFAMILY SSF52540 364 566 1.16E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19735 0af01c52b84056534a89b13c16db01e1 651 PANTHER PTHR37291 447 643 2.1E-37 T 22-04-2016 APT61_RS19735 0af01c52b84056534a89b13c16db01e1 651 Pfam PF06044 Dam-replacing family 243 329 2.2E-7 T 22-04-2016 IPR010324 Dam-replacing APT61_RS19735 0af01c52b84056534a89b13c16db01e1 651 Pfam PF07728 AAA domain (dynein-related subfamily) 389 544 1.7E-26 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 APT61_RS07220 d374be730ca30731acba5f9113d319fd 289 Gene3D G3DSA:3.40.190.10 87 188 1.3E-28 T 22-04-2016 APT61_RS07220 d374be730ca30731acba5f9113d319fd 289 PANTHER PTHR30126:SF36 2 288 1.8E-186 T 22-04-2016 APT61_RS07220 d374be730ca30731acba5f9113d319fd 289 PANTHER PTHR30126 2 288 1.8E-186 T 22-04-2016 APT61_RS07220 d374be730ca30731acba5f9113d319fd 289 SUPERFAMILY SSF53850 87 288 1.18E-44 T 22-04-2016 APT61_RS07220 d374be730ca30731acba5f9113d319fd 289 Gene3D G3DSA:1.10.10.10 2 82 2.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS07220 d374be730ca30731acba5f9113d319fd 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.6E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS07220 d374be730ca30731acba5f9113d319fd 289 Gene3D G3DSA:3.40.190.10 189 257 6.6E-14 T 22-04-2016 APT61_RS07220 d374be730ca30731acba5f9113d319fd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS07220 d374be730ca30731acba5f9113d319fd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS07220 d374be730ca30731acba5f9113d319fd 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.0E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS07220 d374be730ca30731acba5f9113d319fd 289 SUPERFAMILY SSF46785 2 109 5.99E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS07220 d374be730ca30731acba5f9113d319fd 289 Pfam PF03466 LysR substrate binding domain 86 287 4.5E-49 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS15475 9eb775826f2676e3afd1c7a159543ff9 353 PANTHER PTHR10937:SF12 1 350 5.9E-152 T 22-04-2016 APT61_RS15475 9eb775826f2676e3afd1c7a159543ff9 353 Pfam PF01380 SIS domain 39 163 4.1E-14 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APT61_RS15475 9eb775826f2676e3afd1c7a159543ff9 353 PANTHER PTHR10937 1 350 5.9E-152 T 22-04-2016 APT61_RS15475 9eb775826f2676e3afd1c7a159543ff9 353 Gene3D G3DSA:3.40.50.10490 4 187 3.7E-32 T 22-04-2016 APT61_RS15475 9eb775826f2676e3afd1c7a159543ff9 353 SUPERFAMILY SSF53697 5 342 8.1E-53 T 22-04-2016 APT61_RS15475 9eb775826f2676e3afd1c7a159543ff9 353 Gene3D G3DSA:3.40.50.10490 188 336 3.2E-15 T 22-04-2016 APT61_RS00720 b50259f60125be64ae7bf025fa57884c 283 SUPERFAMILY SSF53681 24 125 4.84E-31 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS00720 b50259f60125be64ae7bf025fa57884c 283 Pfam PF01177 Asp/Glu/Hydantoin racemase 26 235 1.3E-25 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS00720 b50259f60125be64ae7bf025fa57884c 283 PANTHER PTHR21198 15 283 6.7E-114 T 22-04-2016 APT61_RS00720 b50259f60125be64ae7bf025fa57884c 283 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS00720 b50259f60125be64ae7bf025fa57884c 283 PANTHER PTHR21198:SF2 15 283 6.7E-114 T 22-04-2016 APT61_RS00720 b50259f60125be64ae7bf025fa57884c 283 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 89 97 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS00720 b50259f60125be64ae7bf025fa57884c 283 TIGRFAM TIGR00067 glut_race: glutamate racemase 24 270 1.1E-89 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS00720 b50259f60125be64ae7bf025fa57884c 283 Gene3D G3DSA:3.40.50.1860 22 191 6.7E-50 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS00720 b50259f60125be64ae7bf025fa57884c 283 SUPERFAMILY SSF53681 127 279 3.92E-33 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS00720 b50259f60125be64ae7bf025fa57884c 283 Hamap MF_00258 Glutamate racemase [murI]. 22 274 34.695 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 118 131 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 Gene3D G3DSA:1.10.10.10 257 322 3.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 Pfam PF04545 Sigma-70, region 4 262 315 1.8E-15 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 SUPERFAMILY SSF88659 167 241 8.72E-15 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 PRINTS PR00046 Major sigma-70 factor signature 287 302 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 PRINTS PR00046 Major sigma-70 factor signature 302 313 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 PRINTS PR00046 Major sigma-70 factor signature 118 131 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 PRINTS PR00046 Major sigma-70 factor signature 142 150 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 PRINTS PR00046 Major sigma-70 factor signature 266 278 2.5E-27 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 317 2.9E-35 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 Pfam PF00140 Sigma-70 factor, region 1.2 56 88 3.0E-11 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 Gene3D G3DSA:1.10.601.10 50 163 6.9E-55 T 22-04-2016 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 Pfam PF04539 Sigma-70 region 3 174 248 8.9E-21 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 Pfam PF04542 Sigma-70 region 2 94 163 2.9E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 Gene3D G3DSA:1.10.10.10 167 216 2.3E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 PANTHER PTHR30603:SF15 14 329 2.4E-209 T 22-04-2016 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 48 328 1.0E-144 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 287 313 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 SUPERFAMILY SSF88946 56 164 8.63E-46 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 PANTHER PTHR30603 14 329 2.4E-209 T 22-04-2016 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 SUPERFAMILY SSF88659 225 323 8.97E-24 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS04750 bc2b8f37ec031a84d322c1500428ec25 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 328 39.955 T 22-04-2016 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS13410 4905eea9d97e4dc938f607e22cd88aeb 68 Gene3D G3DSA:1.10.10.10 20 64 1.5E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS13410 4905eea9d97e4dc938f607e22cd88aeb 68 SUPERFAMILY SSF46955 17 65 6.96E-7 T 22-04-2016 IPR009061 Putative DNA-binding domain APT61_RS13410 4905eea9d97e4dc938f607e22cd88aeb 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 13 60 4.3E-9 T 22-04-2016 IPR010260 Prophage CP4-57 regulatory protein (AlpA) APT61_RS09365 cbd698de00464b0194e3ddbfaa38f113 300 PANTHER PTHR14226 1 300 2.3E-124 T 22-04-2016 APT61_RS09365 cbd698de00464b0194e3ddbfaa38f113 300 PANTHER PTHR14226:SF24 1 300 2.3E-124 T 22-04-2016 APT61_RS09365 cbd698de00464b0194e3ddbfaa38f113 300 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 11 43 - T 22-04-2016 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 APT61_RS09365 cbd698de00464b0194e3ddbfaa38f113 300 Gene3D G3DSA:3.40.1090.10 8 170 3.6E-5 T 22-04-2016 APT61_RS09365 cbd698de00464b0194e3ddbfaa38f113 300 Pfam PF01734 Patatin-like phospholipase 8 165 9.9E-24 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 APT61_RS09365 cbd698de00464b0194e3ddbfaa38f113 300 SUPERFAMILY SSF52151 1 295 1.33E-57 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APT61_RS11560 2f10269d0cd67296368af7d9d5a46a20 398 Gene3D G3DSA:1.20.1250.20 207 388 9.3E-13 T 22-04-2016 APT61_RS11560 2f10269d0cd67296368af7d9d5a46a20 398 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 29.457 T 22-04-2016 IPR023495 Sugar efflux transporter, putative APT61_RS11560 2f10269d0cd67296368af7d9d5a46a20 398 Gene3D G3DSA:1.20.1250.20 8 195 7.0E-28 T 22-04-2016 APT61_RS11560 2f10269d0cd67296368af7d9d5a46a20 398 Pfam PF07690 Major Facilitator Superfamily 18 319 6.5E-32 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS11560 2f10269d0cd67296368af7d9d5a46a20 398 PANTHER PTHR23501:SF89 1 396 1.2E-248 T 22-04-2016 APT61_RS11560 2f10269d0cd67296368af7d9d5a46a20 398 SUPERFAMILY SSF103473 5 386 1.31E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11560 2f10269d0cd67296368af7d9d5a46a20 398 PANTHER PTHR23501 1 396 1.2E-248 T 22-04-2016 APT61_RS01860 c33d3f28b32f9501f0a68929b1d37664 438 SUPERFAMILY SSF51556 57 376 2.3E-108 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS01860 c33d3f28b32f9501f0a68929b1d37664 438 SUPERFAMILY SSF51338 8 78 6.67E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS01860 c33d3f28b32f9501f0a68929b1d37664 438 PANTHER PTHR32027:SF0 8 413 1.3E-177 T 22-04-2016 APT61_RS01860 c33d3f28b32f9501f0a68929b1d37664 438 Gene3D G3DSA:3.20.20.140 66 367 1.6E-124 T 22-04-2016 APT61_RS01860 c33d3f28b32f9501f0a68929b1d37664 438 PANTHER PTHR32027 8 413 1.3E-177 T 22-04-2016 APT61_RS01860 c33d3f28b32f9501f0a68929b1d37664 438 Pfam PF07969 Amidohydrolase family 45 405 1.9E-53 T 22-04-2016 IPR013108 Amidohydrolase 3 APT61_RS01860 c33d3f28b32f9501f0a68929b1d37664 438 Gene3D G3DSA:2.30.40.10 21 65 5.6E-5 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS06955 90bac64116cf2455f5532c4b4257b0e7 396 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 3 395 4.2E-223 T 22-04-2016 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 UniPathway: UPA00618 APT61_RS06955 90bac64116cf2455f5532c4b4257b0e7 396 Gene3D G3DSA:1.10.1060.10 6 86 4.4E-16 T 22-04-2016 APT61_RS06955 90bac64116cf2455f5532c4b4257b0e7 396 PANTHER PTHR32479:SF9 1 391 2.7E-198 T 22-04-2016 APT61_RS06955 90bac64116cf2455f5532c4b4257b0e7 396 PANTHER PTHR32479 1 391 2.7E-198 T 22-04-2016 APT61_RS06955 90bac64116cf2455f5532c4b4257b0e7 396 Pfam PF02754 Cysteine-rich domain 293 376 2.0E-13 T 22-04-2016 IPR004017 Cysteine-rich domain APT61_RS06955 90bac64116cf2455f5532c4b4257b0e7 396 Pfam PF02754 Cysteine-rich domain 163 249 1.0E-14 T 22-04-2016 IPR004017 Cysteine-rich domain APT61_RS06955 90bac64116cf2455f5532c4b4257b0e7 396 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS06955 90bac64116cf2455f5532c4b4257b0e7 396 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS06955 90bac64116cf2455f5532c4b4257b0e7 396 Pfam PF13183 4Fe-4S dicluster domain 6 70 2.1E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS06955 90bac64116cf2455f5532c4b4257b0e7 396 SUPERFAMILY SSF46548 6 83 1.92E-16 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APT61_RS21695 5ecc6bb6bfcc8f085f0504e78fe158af 152 PANTHER PTHR11241 1 151 6.5E-55 T 22-04-2016 APT61_RS21695 5ecc6bb6bfcc8f085f0504e78fe158af 152 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 7 151 34.219 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 APT61_RS21695 5ecc6bb6bfcc8f085f0504e78fe158af 152 TIGRFAM TIGR00576 dut: dUTP diphosphatase 11 151 1.2E-49 T 22-04-2016 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7206|UniPathway: UPA00610 APT61_RS21695 5ecc6bb6bfcc8f085f0504e78fe158af 152 Gene3D G3DSA:2.70.40.10 5 151 4.3E-52 T 22-04-2016 IPR029054 dUTPase-like APT61_RS21695 5ecc6bb6bfcc8f085f0504e78fe158af 152 Pfam PF00692 dUTPase 17 150 2.8E-44 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 APT61_RS21695 5ecc6bb6bfcc8f085f0504e78fe158af 152 SUPERFAMILY SSF51283 1 151 8.11E-55 T 22-04-2016 IPR029054 dUTPase-like APT61_RS16840 85a6c570eb974693302aa9c195ee44cc 113 Pfam PF12833 Helix-turn-helix domain 28 106 1.7E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS16840 85a6c570eb974693302aa9c195ee44cc 113 PANTHER PTHR11019 7 113 4.3E-61 T 22-04-2016 APT61_RS16840 85a6c570eb974693302aa9c195ee44cc 113 PANTHER PTHR11019:SF84 7 113 4.3E-61 T 22-04-2016 APT61_RS16840 85a6c570eb974693302aa9c195ee44cc 113 SUPERFAMILY SSF46689 59 108 8.06E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS16840 85a6c570eb974693302aa9c195ee44cc 113 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 2.4E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS16840 85a6c570eb974693302aa9c195ee44cc 113 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 2.4E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS16840 85a6c570eb974693302aa9c195ee44cc 113 SMART SM00342 22 105 4.9E-35 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS16840 85a6c570eb974693302aa9c195ee44cc 113 Gene3D G3DSA:1.10.10.60 6 58 1.9E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS16840 85a6c570eb974693302aa9c195ee44cc 113 Gene3D G3DSA:1.10.10.60 59 108 3.6E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS16840 85a6c570eb974693302aa9c195ee44cc 113 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS16840 85a6c570eb974693302aa9c195ee44cc 113 SUPERFAMILY SSF46689 6 56 1.52E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS14740 caf0274b4b7d1ca306b64a7057db7cc4 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 22-04-2016 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 APT61_RS14740 caf0274b4b7d1ca306b64a7057db7cc4 152 Gene3D G3DSA:3.40.50.1380 2 151 1.7E-66 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APT61_RS14740 caf0274b4b7d1ca306b64a7057db7cc4 152 SMART SM00851 25 118 8.6E-25 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APT61_RS14740 caf0274b4b7d1ca306b64a7057db7cc4 152 PIRSF PIRSF006614 8 151 2.3E-66 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 APT61_RS14740 caf0274b4b7d1ca306b64a7057db7cc4 152 PANTHER PTHR30492 2 151 1.1E-90 T 22-04-2016 APT61_RS14740 caf0274b4b7d1ca306b64a7057db7cc4 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 1.7E-73 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 APT61_RS14740 caf0274b4b7d1ca306b64a7057db7cc4 152 SUPERFAMILY SSF52335 5 151 3.4E-58 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APT61_RS14740 caf0274b4b7d1ca306b64a7057db7cc4 152 Pfam PF02142 MGS-like domain 26 118 1.4E-19 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain APT61_RS14740 caf0274b4b7d1ca306b64a7057db7cc4 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 37.971 T 22-04-2016 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 APT61_RS17065 ab9bd14c34444b2ea0ff25eea9896049 136 PANTHER PTHR30204 2 135 9.8E-83 T 22-04-2016 APT61_RS17065 ab9bd14c34444b2ea0ff25eea9896049 136 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 3.0E-62 T 22-04-2016 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 APT61_RS17065 ab9bd14c34444b2ea0ff25eea9896049 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.8E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS17065 ab9bd14c34444b2ea0ff25eea9896049 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.8E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS17065 ab9bd14c34444b2ea0ff25eea9896049 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.8E-7 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS17065 ab9bd14c34444b2ea0ff25eea9896049 136 SUPERFAMILY SSF46955 2 126 8.24E-34 T 22-04-2016 IPR009061 Putative DNA-binding domain APT61_RS17065 ab9bd14c34444b2ea0ff25eea9896049 136 Gene3D G3DSA:1.10.1660.10 2 55 1.4E-22 T 22-04-2016 APT61_RS17065 ab9bd14c34444b2ea0ff25eea9896049 136 SMART SM00422 1 70 4.0E-26 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS17065 ab9bd14c34444b2ea0ff25eea9896049 136 PANTHER PTHR30204:SF16 2 135 9.8E-83 T 22-04-2016 APT61_RS17065 ab9bd14c34444b2ea0ff25eea9896049 136 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS17065 ab9bd14c34444b2ea0ff25eea9896049 136 Gene3D G3DSA:1.10.1660.10 56 131 5.5E-24 T 22-04-2016 APT61_RS17065 ab9bd14c34444b2ea0ff25eea9896049 136 Pfam PF13411 MerR HTH family regulatory protein 2 67 2.6E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS09280 e14e967cfc8a37f91ad6c283bcd70c41 216 SUPERFAMILY SSF52172 6 135 1.07E-35 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS09280 e14e967cfc8a37f91ad6c283bcd70c41 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS09280 e14e967cfc8a37f91ad6c283bcd70c41 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS09280 e14e967cfc8a37f91ad6c283bcd70c41 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS09280 e14e967cfc8a37f91ad6c283bcd70c41 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS09280 e14e967cfc8a37f91ad6c283bcd70c41 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 1.2E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS09280 e14e967cfc8a37f91ad6c283bcd70c41 216 SMART SM00421 153 210 1.0E-25 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS09280 e14e967cfc8a37f91ad6c283bcd70c41 216 PANTHER PTHR26402 7 209 5.8E-133 T 22-04-2016 APT61_RS09280 e14e967cfc8a37f91ad6c283bcd70c41 216 Gene3D G3DSA:3.40.50.2300 5 154 3.1E-40 T 22-04-2016 APT61_RS09280 e14e967cfc8a37f91ad6c283bcd70c41 216 SMART SM00448 7 120 2.0E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS09280 e14e967cfc8a37f91ad6c283bcd70c41 216 Gene3D G3DSA:1.10.10.10 155 214 1.1E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS09280 e14e967cfc8a37f91ad6c283bcd70c41 216 Pfam PF00072 Response regulator receiver domain 9 120 6.7E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS09280 e14e967cfc8a37f91ad6c283bcd70c41 216 PANTHER PTHR26402:SF555 7 209 5.8E-133 T 22-04-2016 APT61_RS09280 e14e967cfc8a37f91ad6c283bcd70c41 216 SUPERFAMILY SSF46894 147 213 1.7E-20 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS03605 b3925eb188230ae4653fd77bd1550bdd 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 2.8E-79 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 APT61_RS03605 b3925eb188230ae4653fd77bd1550bdd 210 Gene3D G3DSA:3.90.79.10 10 208 2.8E-57 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS03605 b3925eb188230ae4653fd77bd1550bdd 210 SUPERFAMILY SSF55811 4 208 4.87E-52 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS03605 b3925eb188230ae4653fd77bd1550bdd 210 PANTHER PTHR11839:SF5 1 210 1.9E-129 T 22-04-2016 APT61_RS03605 b3925eb188230ae4653fd77bd1550bdd 210 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APT61_RS03605 b3925eb188230ae4653fd77bd1550bdd 210 Pfam PF00293 NUDIX domain 59 179 1.1E-12 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APT61_RS03605 b3925eb188230ae4653fd77bd1550bdd 210 PANTHER PTHR11839 1 210 1.9E-129 T 22-04-2016 APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 Gene3D G3DSA:3.30.460.10 178 324 1.8E-47 T 22-04-2016 APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 Gene3D G3DSA:3.10.20.30 387 448 4.2E-23 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 700 6.2E-291 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 SUPERFAMILY SSF55021 628 700 1.97E-5 T 22-04-2016 APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 SMART SM00471 41 153 1.3E-11 T 22-04-2016 IPR003607 HD/PDEase domain APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 SUPERFAMILY SSF81271 375 447 3.71E-21 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 SUPERFAMILY SSF109604 3 190 5.86E-76 T 22-04-2016 APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 3.1E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 SMART SM00954 235 345 3.5E-63 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 PANTHER PTHR21262 3 703 0.0 T 22-04-2016 APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 Pfam PF13291 ACT domain 623 700 1.7E-15 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 Pfam PF13328 HD domain 26 175 4.0E-53 T 22-04-2016 IPR003607 HD/PDEase domain APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 Gene3D G3DSA:3.30.70.260 628 698 1.9E-5 T 22-04-2016 APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 PANTHER PTHR21262:SF0 3 703 0.0 T 22-04-2016 APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 SUPERFAMILY SSF81301 180 392 1.63E-62 T 22-04-2016 APT61_RS21745 c46b9dbbbce67b7458f8bbd429180635 703 Pfam PF02824 TGS domain 388 447 1.7E-21 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APT61_RS16260 f9187566c514901fe62941d3b5aea7b4 660 PANTHER PTHR30009:SF4 1 487 6.7E-232 T 22-04-2016 APT61_RS16260 f9187566c514901fe62941d3b5aea7b4 660 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 512 632 1.3E-46 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS16260 f9187566c514901fe62941d3b5aea7b4 660 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 574 586 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS16260 f9187566c514901fe62941d3b5aea7b4 660 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 369 465 1.3E-19 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS16260 f9187566c514901fe62941d3b5aea7b4 660 SUPERFAMILY SSF55604 405 477 1.31E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS16260 f9187566c514901fe62941d3b5aea7b4 660 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 476 4.1E-195 T 22-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 APT61_RS16260 f9187566c514901fe62941d3b5aea7b4 660 Gene3D G3DSA:3.30.1360.60 403 477 1.6E-23 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS16260 f9187566c514901fe62941d3b5aea7b4 660 SUPERFAMILY SSF51261 508 655 1.36E-49 T 22-04-2016 IPR011055 Duplicated hybrid motif APT61_RS16260 f9187566c514901fe62941d3b5aea7b4 660 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 512 635 2.2E-46 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS16260 f9187566c514901fe62941d3b5aea7b4 660 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 418 435 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS16260 f9187566c514901fe62941d3b5aea7b4 660 PANTHER PTHR30009 1 487 6.7E-232 T 22-04-2016 APT61_RS16260 f9187566c514901fe62941d3b5aea7b4 660 Pfam PF02378 Phosphotransferase system, EIIC 1 310 1.4E-77 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS16260 f9187566c514901fe62941d3b5aea7b4 660 Pfam PF00367 phosphotransferase system, EIIB 407 440 1.1E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS16260 f9187566c514901fe62941d3b5aea7b4 660 Gene3D G3DSA:2.70.70.10 510 654 3.4E-55 T 22-04-2016 APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 Gene3D G3DSA:3.30.230.10 1 164 8.1E-51 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 SUPERFAMILY SSF54211 1 160 3.19E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 Pfam PF00288 GHMP kinases N terminal domain 85 150 3.0E-13 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 PIRSF PIRSF000676 1 308 5.4E-87 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 Pfam PF08544 GHMP kinases C terminal 215 282 2.7E-10 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 SUPERFAMILY SSF55060 172 289 4.6E-33 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 PANTHER PTHR20861 1 309 2.3E-132 T 22-04-2016 APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 308 1.4E-117 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 PANTHER PTHR20861:SF1 1 309 2.3E-132 T 22-04-2016 APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 PRINTS PR00958 Homoserine kinase signature 137 150 4.1E-34 T 22-04-2016 APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 PRINTS PR00958 Homoserine kinase signature 97 112 4.1E-34 T 22-04-2016 APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 PRINTS PR00958 Homoserine kinase signature 254 269 4.1E-34 T 22-04-2016 APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 PRINTS PR00958 Homoserine kinase signature 9 24 4.1E-34 T 22-04-2016 APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 PRINTS PR00958 Homoserine kinase signature 175 192 4.1E-34 T 22-04-2016 APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 Gene3D G3DSA:3.30.70.890 169 298 7.0E-41 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APT61_RS19060 1098c3438c9da11211c4617f9b6fffb7 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 30.641 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 APT61_RS11175 28ef36269111517516486f877edb1014 199 Gene3D G3DSA:3.90.80.10 27 195 1.0E-51 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APT61_RS11175 28ef36269111517516486f877edb1014 199 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 85 91 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APT61_RS11175 28ef36269111517516486f877edb1014 199 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 34 194 30.113 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APT61_RS11175 28ef36269111517516486f877edb1014 199 SUPERFAMILY SSF50324 28 194 1.09E-53 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APT61_RS11175 28ef36269111517516486f877edb1014 199 Pfam PF00719 Inorganic pyrophosphatase 38 194 4.9E-45 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APT61_RS11175 28ef36269111517516486f877edb1014 199 PANTHER PTHR10286 31 194 1.0E-52 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APT61_RS10960 b27dd434acd612638ac7c6ad0b522fc4 230 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS10960 b27dd434acd612638ac7c6ad0b522fc4 230 PANTHER PTHR24220:SF151 6 217 8.9E-102 T 22-04-2016 APT61_RS10960 b27dd434acd612638ac7c6ad0b522fc4 230 SMART SM00382 29 216 1.1E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS10960 b27dd434acd612638ac7c6ad0b522fc4 230 Gene3D G3DSA:3.40.50.300 5 220 2.9E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10960 b27dd434acd612638ac7c6ad0b522fc4 230 Pfam PF00005 ABC transporter 20 166 8.9E-38 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS10960 b27dd434acd612638ac7c6ad0b522fc4 230 SUPERFAMILY SSF52540 5 218 1.64E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10960 b27dd434acd612638ac7c6ad0b522fc4 230 PANTHER PTHR24220 6 217 8.9E-102 T 22-04-2016 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 SMART SM00304 303 362 16.0 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 SMART SM00304 224 278 7.3E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 Pfam PF02203 Tar ligand binding domain homologue 19 180 1.9E-31 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 SUPERFAMILY SSF58104 254 527 1.7E-50 T 22-04-2016 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 334 525 2.4E-38 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 Pfam PF00672 HAMP domain 205 275 3.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 PANTHER PTHR32089 152 529 2.8E-75 T 22-04-2016 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 Gene3D G3DSA:1.20.120.30 51 187 9.3E-34 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 SMART SM00283 279 526 2.0E-43 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 1.7E-36 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 199 219 1.7E-36 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 300 329 1.7E-36 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 454 483 1.7E-36 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 74 89 1.7E-36 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 1.7E-36 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 19 44 1.7E-36 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 Gene3D G3DSA:1.10.287.950 294 497 3.9E-42 T 22-04-2016 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 SUPERFAMILY SSF47170 39 186 1.16E-33 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS11475 1fa3dc0d5d0eb54e8a06b079be11fb0c 529 PANTHER PTHR32089:SF63 152 529 2.8E-75 T 22-04-2016 APT61_RS08765 071f7eaebc8f268ec83ba76fb01fe7ec 329 PANTHER PTHR15032:SF4 74 329 2.9E-115 T 22-04-2016 APT61_RS08765 071f7eaebc8f268ec83ba76fb01fe7ec 329 Pfam PF12706 Beta-lactamase superfamily domain 91 287 1.4E-43 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS08765 071f7eaebc8f268ec83ba76fb01fe7ec 329 PANTHER PTHR15032 74 329 2.9E-115 T 22-04-2016 APT61_RS08765 071f7eaebc8f268ec83ba76fb01fe7ec 329 PIRSF PIRSF038896 6 329 3.2E-97 T 22-04-2016 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 APT61_RS08765 071f7eaebc8f268ec83ba76fb01fe7ec 329 Gene3D G3DSA:3.60.15.10 68 325 4.1E-82 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS08765 071f7eaebc8f268ec83ba76fb01fe7ec 329 SUPERFAMILY SSF56281 67 304 1.22E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS02985 2357b8b1ee5cda2aeffa862995f8aa14 764 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APT61_RS02985 2357b8b1ee5cda2aeffa862995f8aa14 764 SUPERFAMILY SSF51998 12 763 4.58E-279 T 22-04-2016 APT61_RS02985 2357b8b1ee5cda2aeffa862995f8aa14 764 PANTHER PTHR30191 12 764 0.0 T 22-04-2016 APT61_RS02985 2357b8b1ee5cda2aeffa862995f8aa14 764 Gene3D G3DSA:3.20.70.20 13 763 0.0 T 22-04-2016 APT61_RS02985 2357b8b1ee5cda2aeffa862995f8aa14 764 PANTHER PTHR30191:SF7 12 764 0.0 T 22-04-2016 APT61_RS02985 2357b8b1ee5cda2aeffa862995f8aa14 764 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 764 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APT61_RS02985 2357b8b1ee5cda2aeffa862995f8aa14 764 Pfam PF01228 Glycine radical 634 745 2.7E-41 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APT61_RS02985 2357b8b1ee5cda2aeffa862995f8aa14 764 Pfam PF02901 Pyruvate formate lyase-like 27 618 1.5E-190 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 APT61_RS02985 2357b8b1ee5cda2aeffa862995f8aa14 764 PIRSF PIRSF000379 12 764 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APT61_RS12110 c59fee6d66d88948040e94e8f4bfce7f 250 Gene3D G3DSA:2.60.120.10 18 169 1.3E-40 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS12110 c59fee6d66d88948040e94e8f4bfce7f 250 Pfam PF13545 Crp-like helix-turn-helix domain 168 240 7.4E-16 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APT61_RS12110 c59fee6d66d88948040e94e8f4bfce7f 250 Pfam PF00027 Cyclic nucleotide-binding domain 51 132 4.1E-16 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain APT61_RS12110 c59fee6d66d88948040e94e8f4bfce7f 250 SMART SM00100 30 151 3.0E-22 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain APT61_RS12110 c59fee6d66d88948040e94e8f4bfce7f 250 ProSitePatterns PS00042 Crp-type HTH domain signature. 195 218 - T 22-04-2016 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 APT61_RS12110 c59fee6d66d88948040e94e8f4bfce7f 250 Gene3D G3DSA:1.10.10.10 170 235 2.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS12110 c59fee6d66d88948040e94e8f4bfce7f 250 SMART SM00419 187 235 2.8E-13 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APT61_RS12110 c59fee6d66d88948040e94e8f4bfce7f 250 SUPERFAMILY SSF46785 165 243 1.39E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS12110 c59fee6d66d88948040e94e8f4bfce7f 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 193 209 2.2E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APT61_RS12110 c59fee6d66d88948040e94e8f4bfce7f 250 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 209 224 2.2E-12 T 22-04-2016 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 APT61_RS12110 c59fee6d66d88948040e94e8f4bfce7f 250 SUPERFAMILY SSF51206 23 162 7.99E-32 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like APT61_RS12110 c59fee6d66d88948040e94e8f4bfce7f 250 PANTHER PTHR24567:SF28 5 248 1.1E-133 T 22-04-2016 APT61_RS12110 c59fee6d66d88948040e94e8f4bfce7f 250 PANTHER PTHR24567 5 248 1.1E-133 T 22-04-2016 APT61_RS18345 d3159df5771d46a2434c52bf0985c110 750 PANTHER PTHR32552:SF17 70 750 9.5E-283 T 22-04-2016 APT61_RS18345 d3159df5771d46a2434c52bf0985c110 750 PANTHER PTHR32552:SF17 14 46 9.5E-283 T 22-04-2016 APT61_RS18345 d3159df5771d46a2434c52bf0985c110 750 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 49 - T 22-04-2016 IPR010916 TonB box, conserved site APT61_RS18345 d3159df5771d46a2434c52bf0985c110 750 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 80 750 2.2E-191 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APT61_RS18345 d3159df5771d46a2434c52bf0985c110 750 Pfam PF07715 TonB-dependent Receptor Plug Domain 79 182 8.7E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS18345 d3159df5771d46a2434c52bf0985c110 750 Pfam PF00593 TonB dependent receptor 512 748 3.2E-26 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS18345 d3159df5771d46a2434c52bf0985c110 750 Gene3D G3DSA:2.40.170.20 198 750 9.1E-173 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS18345 d3159df5771d46a2434c52bf0985c110 750 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 733 750 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site APT61_RS18345 d3159df5771d46a2434c52bf0985c110 750 Gene3D G3DSA:2.170.130.10 32 194 6.8E-41 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS18345 d3159df5771d46a2434c52bf0985c110 750 PANTHER PTHR32552 70 750 9.5E-283 T 22-04-2016 APT61_RS18345 d3159df5771d46a2434c52bf0985c110 750 PANTHER PTHR32552 14 46 9.5E-283 T 22-04-2016 APT61_RS18345 d3159df5771d46a2434c52bf0985c110 750 SUPERFAMILY SSF56935 41 750 1.71E-143 T 22-04-2016 APT61_RS17290 5605cb1bb2fa1096a432360ef045c75b 132 SUPERFAMILY SSF54637 3 128 1.02E-37 T 22-04-2016 IPR029069 HotDog domain APT61_RS17290 5605cb1bb2fa1096a432360ef045c75b 132 Gene3D G3DSA:3.10.129.10 2 128 3.7E-43 T 22-04-2016 IPR029069 HotDog domain APT61_RS17290 5605cb1bb2fa1096a432360ef045c75b 132 Pfam PF13279 Thioesterase-like superfamily 11 126 9.4E-16 T 22-04-2016 APT61_RS17290 5605cb1bb2fa1096a432360ef045c75b 132 PANTHER PTHR31793 1 132 2.6E-97 T 22-04-2016 APT61_RS17290 5605cb1bb2fa1096a432360ef045c75b 132 PANTHER PTHR31793:SF8 1 132 2.6E-97 T 22-04-2016 APT61_RS17290 5605cb1bb2fa1096a432360ef045c75b 132 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 118 5.0E-36 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APT61_RS17290 5605cb1bb2fa1096a432360ef045c75b 132 PIRSF PIRSF003230 1 132 1.3E-21 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APT61_RS11215 c1a27c479eece2f448c2cfadbaf4f6d3 142 PANTHER PTHR33797 1 141 1.0E-64 T 22-04-2016 APT61_RS11215 c1a27c479eece2f448c2cfadbaf4f6d3 142 SUPERFAMILY SSF82784 1 141 5.76E-42 T 22-04-2016 IPR003718 OsmC/Ohr family APT61_RS11215 c1a27c479eece2f448c2cfadbaf4f6d3 142 PANTHER PTHR33797:SF1 1 141 1.0E-64 T 22-04-2016 APT61_RS11215 c1a27c479eece2f448c2cfadbaf4f6d3 142 Gene3D G3DSA:3.30.300.20 3 141 3.2E-54 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APT61_RS11215 c1a27c479eece2f448c2cfadbaf4f6d3 142 Pfam PF02566 OsmC-like protein 43 138 1.7E-20 T 22-04-2016 IPR003718 OsmC/Ohr family APT61_RS11215 c1a27c479eece2f448c2cfadbaf4f6d3 142 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 7.6E-61 T 22-04-2016 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 APT61_RS08410 b2fe8f85f14ff75824c10ee441412350 309 Pfam PF00691 OmpA family 161 258 1.7E-12 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS08410 b2fe8f85f14ff75824c10ee441412350 309 PANTHER PTHR30329:SF2 1 289 3.9E-148 T 22-04-2016 APT61_RS08410 b2fe8f85f14ff75824c10ee441412350 309 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 12 67 2.5E-21 T 22-04-2016 IPR025713 Motility protein B, N-terminal domain APT61_RS08410 b2fe8f85f14ff75824c10ee441412350 309 Gene3D G3DSA:3.30.1330.60 152 265 1.6E-15 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS08410 b2fe8f85f14ff75824c10ee441412350 309 SUPERFAMILY SSF103088 157 265 2.09E-18 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS08410 b2fe8f85f14ff75824c10ee441412350 309 PANTHER PTHR30329 1 289 3.9E-148 T 22-04-2016 APT61_RS17705 d9e77350209f53ca1374c617009278f1 298 SUPERFAMILY SSF46785 3 113 4.84E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17705 d9e77350209f53ca1374c617009278f1 298 Gene3D G3DSA:3.40.190.10 93 179 1.0E-14 T 22-04-2016 APT61_RS17705 d9e77350209f53ca1374c617009278f1 298 PANTHER PTHR30537:SF1 1 293 3.0E-149 T 22-04-2016 APT61_RS17705 d9e77350209f53ca1374c617009278f1 298 Gene3D G3DSA:1.10.10.10 4 79 1.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17705 d9e77350209f53ca1374c617009278f1 298 Pfam PF03466 LysR substrate binding domain 89 293 2.2E-35 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS17705 d9e77350209f53ca1374c617009278f1 298 Gene3D G3DSA:3.40.190.10 180 264 8.0E-16 T 22-04-2016 APT61_RS17705 d9e77350209f53ca1374c617009278f1 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS17705 d9e77350209f53ca1374c617009278f1 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS17705 d9e77350209f53ca1374c617009278f1 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.2E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS17705 d9e77350209f53ca1374c617009278f1 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.4E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS17705 d9e77350209f53ca1374c617009278f1 298 SUPERFAMILY SSF53850 91 293 1.3E-39 T 22-04-2016 APT61_RS17705 d9e77350209f53ca1374c617009278f1 298 PANTHER PTHR30537 1 293 3.0E-149 T 22-04-2016 APT61_RS00020 db8702754dc72bd45348b9f9aabcbc64 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 22-04-2016 IPR020595 MnmG-related, conserved site APT61_RS00020 db8702754dc72bd45348b9f9aabcbc64 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.843 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APT61_RS00020 db8702754dc72bd45348b9f9aabcbc64 629 Pfam PF01134 Glucose inhibited division protein A 8 398 2.7E-169 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 APT61_RS00020 db8702754dc72bd45348b9f9aabcbc64 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 1.2E-303 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 APT61_RS00020 db8702754dc72bd45348b9f9aabcbc64 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 22-04-2016 IPR020595 MnmG-related, conserved site APT61_RS00020 db8702754dc72bd45348b9f9aabcbc64 629 SMART SM01228 546 617 2.3E-44 T 22-04-2016 APT61_RS00020 db8702754dc72bd45348b9f9aabcbc64 629 Pfam PF13932 GidA associated domain 403 616 3.5E-73 T 22-04-2016 IPR026904 GidA associated domain 3 APT61_RS00020 db8702754dc72bd45348b9f9aabcbc64 629 SUPERFAMILY SSF51905 97 261 1.18E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS00020 db8702754dc72bd45348b9f9aabcbc64 629 SUPERFAMILY SSF51905 7 66 1.18E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS00020 db8702754dc72bd45348b9f9aabcbc64 629 Gene3D G3DSA:3.50.50.60 7 234 4.4E-56 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS00020 db8702754dc72bd45348b9f9aabcbc64 629 PANTHER PTHR11806:SF0 1 629 0.0 T 22-04-2016 APT61_RS00020 db8702754dc72bd45348b9f9aabcbc64 629 PANTHER PTHR11806 1 629 0.0 T 22-04-2016 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 8 1172 0.0 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 SUPERFAMILY SSF52540 325 825 3.64E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 SUPERFAMILY SSF52540 14 80 3.64E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 SUPERFAMILY SSF52540 118 202 3.64E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 Gene3D G3DSA:3.90.320.10 890 1175 6.7E-109 T 22-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 Gene3D G3DSA:3.40.50.300 450 580 1.6E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 Gene3D G3DSA:3.40.50.300 729 877 1.6E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 SUPERFAMILY SSF52980 899 1173 2.52E-96 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 PANTHER PTHR11070 794 1168 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 PANTHER PTHR11070 300 772 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 PANTHER PTHR11070 1 89 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 PANTHER PTHR11070 118 215 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 5 1173 15.223 T 22-04-2016 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 Gene3D G3DSA:1.10.486.10 583 728 1.1E-54 T 22-04-2016 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 Gene3D G3DSA:3.40.50.300 351 449 5.9E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 Gene3D G3DSA:3.40.50.300 13 82 5.9E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 Gene3D G3DSA:3.40.50.300 120 150 5.9E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 435 2.0E-63 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 Gene3D G3DSA:1.10.3170.10 155 349 6.8E-65 T 22-04-2016 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 PANTHER PTHR11070:SF23 794 1168 0.0 T 22-04-2016 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 PANTHER PTHR11070:SF23 300 772 0.0 T 22-04-2016 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 PANTHER PTHR11070:SF23 1 89 0.0 T 22-04-2016 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 PANTHER PTHR11070:SF23 118 215 0.0 T 22-04-2016 APT61_RS04465 bf4f204ff1cb2fc5e406a31115b63709 1181 Pfam PF13361 UvrD-like helicase C-terminal domain 551 808 2.6E-17 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APT61_RS21515 75be3f67229a5c64c01685e1a351bd35 387 PANTHER PTHR30524:SF0 5 385 7.9E-213 T 22-04-2016 APT61_RS21515 75be3f67229a5c64c01685e1a351bd35 387 SUPERFAMILY SSF51735 5 208 2.25E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS21515 75be3f67229a5c64c01685e1a351bd35 387 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 155 167 - T 22-04-2016 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS21515 75be3f67229a5c64c01685e1a351bd35 387 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 153 374 5.5E-69 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APT61_RS21515 75be3f67229a5c64c01685e1a351bd35 387 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 6 383 41.68 T 22-04-2016 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS21515 75be3f67229a5c64c01685e1a351bd35 387 Gene3D G3DSA:1.10.1040.10 208 383 4.3E-48 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS21515 75be3f67229a5c64c01685e1a351bd35 387 Gene3D G3DSA:3.40.50.720 5 207 5.0E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS21515 75be3f67229a5c64c01685e1a351bd35 387 SUPERFAMILY SSF48179 209 377 2.58E-45 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS21515 75be3f67229a5c64c01685e1a351bd35 387 PRINTS PR00084 Mannitol dehydrogenase signature 155 168 1.0E-17 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS21515 75be3f67229a5c64c01685e1a351bd35 387 PRINTS PR00084 Mannitol dehydrogenase signature 119 132 1.0E-17 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS21515 75be3f67229a5c64c01685e1a351bd35 387 PRINTS PR00084 Mannitol dehydrogenase signature 175 190 1.0E-17 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS21515 75be3f67229a5c64c01685e1a351bd35 387 PRINTS PR00084 Mannitol dehydrogenase signature 8 18 1.0E-17 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS21515 75be3f67229a5c64c01685e1a351bd35 387 PANTHER PTHR30524 5 385 7.9E-213 T 22-04-2016 APT61_RS21515 75be3f67229a5c64c01685e1a351bd35 387 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 6 128 2.6E-27 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APT61_RS09575 ec91c150d9998ecf62993f628e7f7ec4 254 SUPERFAMILY SSF48317 16 113 4.06E-31 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS09575 ec91c150d9998ecf62993f628e7f7ec4 254 SUPERFAMILY SSF48317 145 233 4.06E-31 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS09575 ec91c150d9998ecf62993f628e7f7ec4 254 Pfam PF01569 PAP2 superfamily 81 232 1.3E-31 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS09575 ec91c150d9998ecf62993f628e7f7ec4 254 SMART SM00014 76 227 4.9E-39 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS09575 ec91c150d9998ecf62993f628e7f7ec4 254 PANTHER PTHR14969:SF22 157 253 8.5E-99 T 22-04-2016 APT61_RS09575 ec91c150d9998ecf62993f628e7f7ec4 254 PANTHER PTHR14969:SF22 1 120 8.5E-99 T 22-04-2016 APT61_RS09575 ec91c150d9998ecf62993f628e7f7ec4 254 Gene3D G3DSA:1.20.144.10 32 120 2.1E-26 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS09575 ec91c150d9998ecf62993f628e7f7ec4 254 Gene3D G3DSA:1.20.144.10 156 232 2.1E-26 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS09575 ec91c150d9998ecf62993f628e7f7ec4 254 PANTHER PTHR14969 157 253 8.5E-99 T 22-04-2016 APT61_RS09575 ec91c150d9998ecf62993f628e7f7ec4 254 PANTHER PTHR14969 1 120 8.5E-99 T 22-04-2016 APT61_RS10245 2f2e8b9e2a0e9a63276ac144450095bc 299 PIRSF PIRSF001365 1 298 1.4E-47 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS10245 2f2e8b9e2a0e9a63276ac144450095bc 299 Pfam PF00701 Dihydrodipicolinate synthetase family 2 292 1.7E-30 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS10245 2f2e8b9e2a0e9a63276ac144450095bc 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 34 55 2.1E-6 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS10245 2f2e8b9e2a0e9a63276ac144450095bc 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 69 87 2.1E-6 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS10245 2f2e8b9e2a0e9a63276ac144450095bc 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 126 143 2.1E-6 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS10245 2f2e8b9e2a0e9a63276ac144450095bc 299 PANTHER PTHR12128:SF15 1 293 3.0E-35 T 22-04-2016 APT61_RS10245 2f2e8b9e2a0e9a63276ac144450095bc 299 SUPERFAMILY SSF51569 1 293 1.67E-52 T 22-04-2016 APT61_RS10245 2f2e8b9e2a0e9a63276ac144450095bc 299 Gene3D G3DSA:3.20.20.70 1 293 9.3E-72 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS10245 2f2e8b9e2a0e9a63276ac144450095bc 299 PANTHER PTHR12128 1 293 3.0E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS10245 2f2e8b9e2a0e9a63276ac144450095bc 299 SMART SM01130 1 294 5.2E-48 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 SMART SM00382 226 363 1.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 SUPERFAMILY SSF55785 82 172 3.77E-8 T 22-04-2016 IPR000014 PAS domain APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 PANTHER PTHR32071:SF3 1 513 6.5E-207 T 22-04-2016 APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 285 300 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 Gene3D G3DSA:1.10.10.60 450 507 3.8E-28 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 Gene3D G3DSA:1.10.8.60 372 441 8.0E-19 T 22-04-2016 APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 460 507 3.9E-28 T 22-04-2016 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 412 421 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 SUPERFAMILY SSF46689 453 507 6.27E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 SUPERFAMILY SSF52540 206 440 2.13E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 Gene3D G3DSA:3.40.50.300 203 371 6.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 Gene3D G3DSA:3.30.450.20 78 181 5.8E-11 T 22-04-2016 APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 PANTHER PTHR32071 1 513 6.5E-207 T 22-04-2016 APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 Pfam PF00158 Sigma-54 interaction domain 206 365 4.9E-56 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APT61_RS09760 96864dce556b26a42317e299d9d4ec16 513 SMART SM00091 80 146 4.7E-6 T 22-04-2016 IPR000014 PAS domain APT61_RS01975 fb46b2b0a3a32b9258ea809535a53647 601 PANTHER PTHR16254 1 557 8.2E-264 T 22-04-2016 APT61_RS01975 fb46b2b0a3a32b9258ea809535a53647 601 SUPERFAMILY SSF51735 402 529 5.69E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS01975 fb46b2b0a3a32b9258ea809535a53647 601 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 9.1E-91 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 APT61_RS01975 fb46b2b0a3a32b9258ea809535a53647 601 PANTHER PTHR16254:SF6 1 557 8.2E-264 T 22-04-2016 APT61_RS01975 fb46b2b0a3a32b9258ea809535a53647 601 Pfam PF00999 Sodium/hydrogen exchanger family 11 373 1.8E-66 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APT61_RS01975 fb46b2b0a3a32b9258ea809535a53647 601 Gene3D G3DSA:3.40.50.720 395 531 2.7E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS01975 fb46b2b0a3a32b9258ea809535a53647 601 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 598 47.337 T 22-04-2016 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 APT61_RS01975 fb46b2b0a3a32b9258ea809535a53647 601 Pfam PF02254 TrkA-N domain 403 514 4.3E-25 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 SMART SM00829 8 386 0.005 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 1.2E-12 T 22-04-2016 IPR027399 Alcohol dehydrogenase GroES-associated APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 PANTHER PTHR11695:SF281 288 397 2.9E-168 T 22-04-2016 APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 PANTHER PTHR11695:SF281 12 106 2.9E-168 T 22-04-2016 APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 PANTHER PTHR11695:SF281 127 266 2.9E-168 T 22-04-2016 APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 SUPERFAMILY SSF50129 1 199 4.87E-59 T 22-04-2016 IPR011032 GroES-like APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 SUPERFAMILY SSF51735 164 349 2.76E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 151 8.2E-30 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 Gene3D G3DSA:3.90.180.10 1 188 3.7E-55 T 22-04-2016 IPR011032 GroES-like APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 PANTHER PTHR11695 288 397 2.9E-168 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 PANTHER PTHR11695 12 106 2.9E-168 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 PANTHER PTHR11695 127 266 2.9E-168 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 Gene3D G3DSA:3.40.50.720 189 330 6.0E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS16500 a8577533fcf2ef4e10f82c4ff6dfd038 412 Pfam PF00107 Zinc-binding dehydrogenase 197 268 7.0E-10 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APT61_RS13115 7f07495f46a7852bf40d54581b2f1e28 272 Gene3D G3DSA:2.60.120.10 26 92 7.2E-13 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS13115 7f07495f46a7852bf40d54581b2f1e28 272 SMART SM00342 182 265 2.3E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS13115 7f07495f46a7852bf40d54581b2f1e28 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 249 5.6E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS13115 7f07495f46a7852bf40d54581b2f1e28 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 265 5.6E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS13115 7f07495f46a7852bf40d54581b2f1e28 272 SUPERFAMILY SSF51182 28 150 1.02E-14 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS13115 7f07495f46a7852bf40d54581b2f1e28 272 SUPERFAMILY SSF46689 218 268 1.12E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS13115 7f07495f46a7852bf40d54581b2f1e28 272 Pfam PF07883 Cupin domain 26 73 2.1E-8 T 22-04-2016 IPR013096 Cupin 2, conserved barrel APT61_RS13115 7f07495f46a7852bf40d54581b2f1e28 272 PANTHER PTHR11019:SF120 1 272 5.0E-161 T 22-04-2016 APT61_RS13115 7f07495f46a7852bf40d54581b2f1e28 272 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 219 261 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS13115 7f07495f46a7852bf40d54581b2f1e28 272 Gene3D G3DSA:1.10.10.60 217 267 5.5E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS13115 7f07495f46a7852bf40d54581b2f1e28 272 PANTHER PTHR11019 1 272 5.0E-161 T 22-04-2016 APT61_RS13115 7f07495f46a7852bf40d54581b2f1e28 272 Pfam PF12833 Helix-turn-helix domain 190 266 3.8E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS07430 147f9d4d42c1961ae922b16f3c9e6d1f 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 2.6E-23 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APT61_RS07430 147f9d4d42c1961ae922b16f3c9e6d1f 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 2.6E-23 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APT61_RS07430 147f9d4d42c1961ae922b16f3c9e6d1f 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 2.6E-23 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APT61_RS07430 147f9d4d42c1961ae922b16f3c9e6d1f 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 2.6E-23 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APT61_RS07430 147f9d4d42c1961ae922b16f3c9e6d1f 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 2.6E-23 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APT61_RS07430 147f9d4d42c1961ae922b16f3c9e6d1f 154 PANTHER PTHR11717:SF20 1 142 1.8E-37 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 APT61_RS07430 147f9d4d42c1961ae922b16f3c9e6d1f 154 PANTHER PTHR11717 1 142 1.8E-37 T 22-04-2016 APT61_RS07430 147f9d4d42c1961ae922b16f3c9e6d1f 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 138 6.8E-35 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APT61_RS07430 147f9d4d42c1961ae922b16f3c9e6d1f 154 SUPERFAMILY SSF52788 1 142 1.83E-39 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APT61_RS07430 147f9d4d42c1961ae922b16f3c9e6d1f 154 SMART SM00226 3 141 5.0E-46 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily APT61_RS07430 147f9d4d42c1961ae922b16f3c9e6d1f 154 Gene3D G3DSA:3.40.50.270 3 145 2.4E-41 T 22-04-2016 APT61_RS09655 2719d94823744f4b4b08df5aaf924a34 321 PANTHER PTHR30465 1 147 2.8E-183 T 22-04-2016 APT61_RS09655 2719d94823744f4b4b08df5aaf924a34 321 PANTHER PTHR30465:SF65 1 147 2.8E-183 T 22-04-2016 APT61_RS09655 2719d94823744f4b4b08df5aaf924a34 321 Gene3D G3DSA:1.10.3720.10 181 305 1.3E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09655 2719d94823744f4b4b08df5aaf924a34 321 Gene3D G3DSA:1.10.3720.10 72 141 1.3E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09655 2719d94823744f4b4b08df5aaf924a34 321 SUPERFAMILY SSF161098 72 138 1.57E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09655 2719d94823744f4b4b08df5aaf924a34 321 SUPERFAMILY SSF161098 178 300 1.57E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09655 2719d94823744f4b4b08df5aaf924a34 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 4.9E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09655 2719d94823744f4b4b08df5aaf924a34 321 PANTHER PTHR30465:SF65 172 315 2.8E-183 T 22-04-2016 APT61_RS09655 2719d94823744f4b4b08df5aaf924a34 321 PANTHER PTHR30465 172 315 2.8E-183 T 22-04-2016 APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 Gene3D G3DSA:3.40.50.720 285 388 1.8E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 2.3E-103 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 PANTHER PTHR11374 1 372 2.8E-235 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 SUPERFAMILY SSF51735 1 194 5.66E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 PIRSF PIRSF000124 1 388 6.3E-137 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 PANTHER PTHR11374:SF17 1 372 2.8E-235 T 22-04-2016 APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 SMART SM00984 300 387 2.5E-14 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 9.8E-33 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 Gene3D G3DSA:1.10.1040.10 198 284 5.3E-36 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 375 1.2E-8 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 SUPERFAMILY SSF48179 191 287 1.22E-30 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 Gene3D G3DSA:3.40.50.720 1 197 3.4E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.1E-27 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 PIRSF PIRSF500134 1 342 4.6E-119 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 APT61_RS07810 74a57e1b9c911d8c5677c6a53a0aad1a 388 SUPERFAMILY SSF52413 283 388 1.44E-27 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APT61_RS02465 7e4eae6663fa7ee198ff6c218ee61d34 88 PANTHER PTHR34156:SF5 2 88 7.3E-39 T 22-04-2016 APT61_RS02465 7e4eae6663fa7ee198ff6c218ee61d34 88 Pfam PF07338 Protein of unknown function (DUF1471) 35 88 3.2E-22 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS02465 7e4eae6663fa7ee198ff6c218ee61d34 88 Gene3D G3DSA:3.30.1660.10 21 88 4.7E-26 T 22-04-2016 IPR025543 Dodecin-like APT61_RS02465 7e4eae6663fa7ee198ff6c218ee61d34 88 PANTHER PTHR34156 2 88 7.3E-39 T 22-04-2016 APT61_RS02465 7e4eae6663fa7ee198ff6c218ee61d34 88 SUPERFAMILY SSF159871 4 88 1.83E-23 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS17455 481a3f55a07de62f8f0deafd0c4c4890 121 PANTHER PTHR33993 1 120 1.4E-44 T 22-04-2016 APT61_RS17455 481a3f55a07de62f8f0deafd0c4c4890 121 SUPERFAMILY SSF54593 5 120 4.95E-20 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS17455 481a3f55a07de62f8f0deafd0c4c4890 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 115 1.1E-6 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APT61_RS17455 481a3f55a07de62f8f0deafd0c4c4890 121 Gene3D G3DSA:3.10.180.10 5 120 1.3E-26 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS17455 481a3f55a07de62f8f0deafd0c4c4890 121 PANTHER PTHR33993:SF4 1 120 1.4E-44 T 22-04-2016 APT61_RS16440 696caa6e913864f42a275e3046b88b7a 213 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 22-04-2016 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APT61_RS16440 696caa6e913864f42a275e3046b88b7a 213 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 2.0E-22 T 22-04-2016 APT61_RS16440 696caa6e913864f42a275e3046b88b7a 213 PANTHER PTHR10993 1 204 8.1E-83 T 22-04-2016 APT61_RS16440 696caa6e913864f42a275e3046b88b7a 213 Gene3D G3DSA:3.90.1550.10 4 203 2.3E-70 T 22-04-2016 APT61_RS16440 696caa6e913864f42a275e3046b88b7a 213 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 159 6.7E-5 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APT61_RS16440 696caa6e913864f42a275e3046b88b7a 213 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 37.529 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APT61_RS16440 696caa6e913864f42a275e3046b88b7a 213 PIRSF PIRSF016262 2 206 6.6E-57 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APT61_RS16440 696caa6e913864f42a275e3046b88b7a 213 SUPERFAMILY SSF55681 5 204 2.4E-68 T 22-04-2016 APT61_RS16440 696caa6e913864f42a275e3046b88b7a 213 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 204 1.4E-77 T 22-04-2016 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APT61_RS14090 344732c83387eff8f2b7da2559faa3f1 138 Pfam PF00460 Flagella basal body rod protein 9 39 4.9E-12 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APT61_RS14090 344732c83387eff8f2b7da2559faa3f1 138 PANTHER PTHR30435:SF12 2 138 5.5E-56 T 22-04-2016 APT61_RS14090 344732c83387eff8f2b7da2559faa3f1 138 PANTHER PTHR30435 2 138 5.5E-56 T 22-04-2016 APT61_RS14090 344732c83387eff8f2b7da2559faa3f1 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site APT61_RS14090 344732c83387eff8f2b7da2559faa3f1 138 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 3.8E-45 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 APT61_RS14090 344732c83387eff8f2b7da2559faa3f1 138 PIRSF PIRSF002889 1 137 3.9E-42 T 22-04-2016 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 APT61_RS02105 61a6df38b3d7b4fe2dc765f336df792a 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 3 81 26.297 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02105 61a6df38b3d7b4fe2dc765f336df792a 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.9E-38 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02105 61a6df38b3d7b4fe2dc765f336df792a 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 1 76 4.0E-35 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02105 61a6df38b3d7b4fe2dc765f336df792a 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 5.5E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02105 61a6df38b3d7b4fe2dc765f336df792a 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 5.5E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02105 61a6df38b3d7b4fe2dc765f336df792a 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 5.5E-14 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02105 61a6df38b3d7b4fe2dc765f336df792a 84 Pfam PF00366 Ribosomal protein S17 10 76 6.8E-34 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02105 61a6df38b3d7b4fe2dc765f336df792a 84 PANTHER PTHR10744 6 83 2.1E-44 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02105 61a6df38b3d7b4fe2dc765f336df792a 84 SUPERFAMILY SSF50249 5 82 2.01E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS02105 61a6df38b3d7b4fe2dc765f336df792a 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02105 61a6df38b3d7b4fe2dc765f336df792a 84 Gene3D G3DSA:2.40.50.140 6 82 1.1E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS17755 10c9784e0bbcca730c8e84ba2a249c8a 378 PANTHER PTHR23501 1 370 9.4E-177 T 22-04-2016 APT61_RS17755 10c9784e0bbcca730c8e84ba2a249c8a 378 SUPERFAMILY SSF103473 2 369 1.31E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS17755 10c9784e0bbcca730c8e84ba2a249c8a 378 Gene3D G3DSA:1.20.1250.20 2 175 2.5E-24 T 22-04-2016 APT61_RS17755 10c9784e0bbcca730c8e84ba2a249c8a 378 Gene3D G3DSA:1.20.1250.20 191 368 1.5E-16 T 22-04-2016 APT61_RS17755 10c9784e0bbcca730c8e84ba2a249c8a 378 PANTHER PTHR23501:SF28 1 370 9.4E-177 T 22-04-2016 APT61_RS17755 10c9784e0bbcca730c8e84ba2a249c8a 378 Pfam PF07690 Major Facilitator Superfamily 2 314 1.5E-25 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS08585 9e26221874c5a3df21993d2bd3956fa7 251 Gene3D G3DSA:3.40.50.300 3 208 3.5E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08585 9e26221874c5a3df21993d2bd3956fa7 251 Pfam PF00005 ABC transporter 20 149 5.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS08585 9e26221874c5a3df21993d2bd3956fa7 251 SMART SM00382 29 199 1.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS08585 9e26221874c5a3df21993d2bd3956fa7 251 SUPERFAMILY SSF52540 4 216 9.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08585 9e26221874c5a3df21993d2bd3956fa7 251 PANTHER PTHR24220:SF466 6 250 3.2E-167 T 22-04-2016 APT61_RS08585 9e26221874c5a3df21993d2bd3956fa7 251 PANTHER PTHR24220 6 250 3.2E-167 T 22-04-2016 APT61_RS18385 9bb1df0d51d6c38ceef5774a3e6d2c01 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APT61_RS18385 9bb1df0d51d6c38ceef5774a3e6d2c01 159 SUPERFAMILY SSF55083 1 155 1.12E-52 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APT61_RS18385 9bb1df0d51d6c38ceef5774a3e6d2c01 159 PANTHER PTHR20941 1 151 5.8E-74 T 22-04-2016 APT61_RS18385 9bb1df0d51d6c38ceef5774a3e6d2c01 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 9.7E-45 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APT61_RS18385 9bb1df0d51d6c38ceef5774a3e6d2c01 159 Gene3D G3DSA:3.30.70.560 4 154 2.5E-57 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APT61_RS18385 9bb1df0d51d6c38ceef5774a3e6d2c01 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 3.7E-35 T 22-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APT61_RS15585 7a08b9aad29c4e2b8899d8fa08dd3ba2 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 232 3.0E-21 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APT61_RS15585 7a08b9aad29c4e2b8899d8fa08dd3ba2 271 Gene3D G3DSA:3.30.1240.10 84 178 1.0E-31 T 22-04-2016 APT61_RS15585 7a08b9aad29c4e2b8899d8fa08dd3ba2 271 Gene3D G3DSA:3.40.50.1000 179 264 3.3E-47 T 22-04-2016 IPR023214 HAD-like domain APT61_RS15585 7a08b9aad29c4e2b8899d8fa08dd3ba2 271 Gene3D G3DSA:3.40.50.1000 1 74 3.3E-47 T 22-04-2016 IPR023214 HAD-like domain APT61_RS15585 7a08b9aad29c4e2b8899d8fa08dd3ba2 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 1.2E-59 T 22-04-2016 IPR000150 Cof protein GO:0016787 APT61_RS15585 7a08b9aad29c4e2b8899d8fa08dd3ba2 271 PANTHER PTHR10000 1 265 2.9E-178 T 22-04-2016 APT61_RS15585 7a08b9aad29c4e2b8899d8fa08dd3ba2 271 PANTHER PTHR10000:SF22 1 265 2.9E-178 T 22-04-2016 APT61_RS15585 7a08b9aad29c4e2b8899d8fa08dd3ba2 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 9.1E-52 T 22-04-2016 IPR023214 HAD-like domain APT61_RS15585 7a08b9aad29c4e2b8899d8fa08dd3ba2 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 22-04-2016 APT61_RS15585 7a08b9aad29c4e2b8899d8fa08dd3ba2 271 SUPERFAMILY SSF56784 1 262 8.41E-63 T 22-04-2016 IPR023214 HAD-like domain APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 930 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 Gene3D G3DSA:1.10.287.380 878 931 1.7E-5 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 823 7.3E-42 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 Gene3D G3DSA:3.90.740.10 194 360 3.5E-47 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 PANTHER PTHR11946 608 860 0.0 T 22-04-2016 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 PANTHER PTHR11946 1 570 0.0 T 22-04-2016 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 PANTHER PTHR11946 880 947 0.0 T 22-04-2016 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.186 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.6E-227 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 SUPERFAMILY SSF46589 884 947 1.83E-15 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 Gene3D G3DSA:3.40.50.620 3 193 3.3E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 Gene3D G3DSA:3.40.50.620 364 571 3.3E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 Gene3D G3DSA:3.40.50.620 609 630 3.3E-141 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 884 944 5.6E-15 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 SUPERFAMILY SSF47323 642 899 2.06E-70 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 PANTHER PTHR11946:SF5 608 860 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 PANTHER PTHR11946:SF5 1 570 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 PANTHER PTHR11946:SF5 880 947 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 Gene3D G3DSA:1.10.730.10 631 816 2.2E-65 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 SUPERFAMILY SSF50677 191 365 1.44E-56 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 SUPERFAMILY SSF52374 364 571 6.61E-136 T 22-04-2016 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 SUPERFAMILY SSF52374 1 192 6.61E-136 T 22-04-2016 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 SUPERFAMILY SSF52374 609 641 6.61E-136 T 22-04-2016 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.4E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.4E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.4E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APT61_RS02580 d0af5c6c661df8ca45cad9e0b6efcd65 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.4E-35 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 APT61_RS04005 e60a710bba8be46d51e2bad1e762cf22 243 Gene3D G3DSA:3.40.1280.10 75 242 1.9E-58 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT61_RS04005 e60a710bba8be46d51e2bad1e762cf22 243 Gene3D G3DSA:2.40.240.20 1 70 1.6E-27 T 22-04-2016 APT61_RS04005 e60a710bba8be46d51e2bad1e762cf22 243 PANTHER PTHR30027 1 243 1.0E-101 T 22-04-2016 APT61_RS04005 e60a710bba8be46d51e2bad1e762cf22 243 SUPERFAMILY SSF75217 75 242 1.15E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APT61_RS04005 e60a710bba8be46d51e2bad1e762cf22 243 SUPERFAMILY SSF88697 2 68 1.19E-16 T 22-04-2016 IPR015947 PUA-like domain APT61_RS04005 e60a710bba8be46d51e2bad1e762cf22 243 PANTHER PTHR30027:SF3 1 243 1.0E-101 T 22-04-2016 APT61_RS04005 e60a710bba8be46d51e2bad1e762cf22 243 PIRSF PIRSF015601 2 242 6.6E-51 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS04005 e60a710bba8be46d51e2bad1e762cf22 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 242 2.9E-91 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS04005 e60a710bba8be46d51e2bad1e762cf22 243 Pfam PF04452 RNA methyltransferase 19 236 1.5E-71 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS17580 d505b098f1f412cab4f70568f528d7b5 472 PANTHER PTHR11596 318 471 1.5E-145 T 22-04-2016 APT61_RS17580 d505b098f1f412cab4f70568f528d7b5 472 PANTHER PTHR11596 46 295 1.5E-145 T 22-04-2016 APT61_RS17580 d505b098f1f412cab4f70568f528d7b5 472 PANTHER PTHR11596:SF5 46 295 1.5E-145 T 22-04-2016 APT61_RS17580 d505b098f1f412cab4f70568f528d7b5 472 SMART SM00098 66 472 2.9E-222 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APT61_RS17580 d505b098f1f412cab4f70568f528d7b5 472 ProSitePatterns PS00123 Alkaline phosphatase active site. 122 130 - T 22-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APT61_RS17580 d505b098f1f412cab4f70568f528d7b5 472 SUPERFAMILY SSF53649 42 471 3.78E-136 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APT61_RS17580 d505b098f1f412cab4f70568f528d7b5 472 Gene3D G3DSA:3.40.720.10 48 471 1.7E-138 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APT61_RS17580 d505b098f1f412cab4f70568f528d7b5 472 Pfam PF00245 Alkaline phosphatase 65 431 5.6E-127 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APT61_RS17580 d505b098f1f412cab4f70568f528d7b5 472 PANTHER PTHR11596:SF5 318 471 1.5E-145 T 22-04-2016 APT61_RS17580 d505b098f1f412cab4f70568f528d7b5 472 PRINTS PR00113 Alkaline phosphatase signature 65 85 1.3E-49 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APT61_RS17580 d505b098f1f412cab4f70568f528d7b5 472 PRINTS PR00113 Alkaline phosphatase signature 159 179 1.3E-49 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APT61_RS17580 d505b098f1f412cab4f70568f528d7b5 472 PRINTS PR00113 Alkaline phosphatase signature 222 232 1.3E-49 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APT61_RS17580 d505b098f1f412cab4f70568f528d7b5 472 PRINTS PR00113 Alkaline phosphatase signature 122 137 1.3E-49 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APT61_RS17580 d505b098f1f412cab4f70568f528d7b5 472 PRINTS PR00113 Alkaline phosphatase signature 321 350 1.3E-49 T 22-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 APT61_RS09285 cb260159f9e5f1deaedc37ffd202039e 598 PIRSF PIRSF003167 1 596 2.1E-191 T 22-04-2016 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 APT61_RS09285 cb260159f9e5f1deaedc37ffd202039e 598 SUPERFAMILY SSF158472 178 225 3.66E-6 T 22-04-2016 APT61_RS09285 cb260159f9e5f1deaedc37ffd202039e 598 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 124 1.1E-9 T 22-04-2016 IPR029095 NarX-like, N-terminal APT61_RS09285 cb260159f9e5f1deaedc37ffd202039e 598 SMART SM00304 176 228 4.3E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS09285 cb260159f9e5f1deaedc37ffd202039e 598 Gene3D G3DSA:3.30.565.10 461 583 4.9E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS09285 cb260159f9e5f1deaedc37ffd202039e 598 Pfam PF07730 Histidine kinase 390 453 3.7E-18 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APT61_RS09285 cb260159f9e5f1deaedc37ffd202039e 598 SMART SM00387 494 587 2.8E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS09285 cb260159f9e5f1deaedc37ffd202039e 598 PANTHER PTHR24421:SF12 87 583 1.7E-196 T 22-04-2016 APT61_RS09285 cb260159f9e5f1deaedc37ffd202039e 598 SUPERFAMILY SSF55874 466 583 3.27E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS09285 cb260159f9e5f1deaedc37ffd202039e 598 Pfam PF00672 HAMP domain 159 224 2.0E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS09285 cb260159f9e5f1deaedc37ffd202039e 598 PANTHER PTHR24421 87 583 1.7E-196 T 22-04-2016 APT61_RS09285 cb260159f9e5f1deaedc37ffd202039e 598 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 496 583 2.5E-9 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS20370 26b1260dd11bb4169b88384f5d41a226 379 Gene3D G3DSA:3.30.70.20 190 258 1.8E-6 T 22-04-2016 APT61_RS20370 26b1260dd11bb4169b88384f5d41a226 379 PANTHER PTHR30002:SF4 2 371 2.0E-212 T 22-04-2016 APT61_RS20370 26b1260dd11bb4169b88384f5d41a226 379 Pfam PF13484 4Fe-4S double cluster binding domain 193 256 3.8E-19 T 22-04-2016 APT61_RS20370 26b1260dd11bb4169b88384f5d41a226 379 Pfam PF08331 Domain of unknown function (DUF1730) 62 140 1.0E-23 T 22-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS20370 26b1260dd11bb4169b88384f5d41a226 379 SUPERFAMILY SSF46548 139 256 1.31E-19 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APT61_RS20370 26b1260dd11bb4169b88384f5d41a226 379 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS20370 26b1260dd11bb4169b88384f5d41a226 379 PANTHER PTHR30002 2 371 2.0E-212 T 22-04-2016 APT61_RS20370 26b1260dd11bb4169b88384f5d41a226 379 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 315 51.051 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS20370 26b1260dd11bb4169b88384f5d41a226 379 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 348 2.6E-152 T 22-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS21845 fcd50fb8124e17b207b8760452ffd1fc 319 PANTHER PTHR30087 1 318 1.1E-148 T 22-04-2016 APT61_RS21845 fcd50fb8124e17b207b8760452ffd1fc 319 Pfam PF08349 Protein of unknown function (DUF1722) 192 309 1.3E-40 T 22-04-2016 IPR013560 Domain of unknown function DUF1722 APT61_RS21845 fcd50fb8124e17b207b8760452ffd1fc 319 PANTHER PTHR30087:SF0 1 318 1.1E-148 T 22-04-2016 APT61_RS21845 fcd50fb8124e17b207b8760452ffd1fc 319 Pfam PF04463 Protein of unknown function (DUF523) 8 149 1.8E-36 T 22-04-2016 IPR007553 Domain of unknown function DUF523 APT61_RS21845 fcd50fb8124e17b207b8760452ffd1fc 319 PIRSF PIRSF037004 1 318 6.5E-134 T 22-04-2016 IPR017087 Uncharacterised conserved protein UCP037004 APT61_RS09100 efb42f2c78e9d73cea73ad263133279c 135 Pfam PF09722 Protein of unknown function (DUF2384) 78 132 2.4E-5 T 22-04-2016 IPR024467 Domain of unknown function DUF2384 APT61_RS09100 efb42f2c78e9d73cea73ad263133279c 135 ProDom PD080812 PLASMID Y4OB BMEII097 AGR_L_107P MLL2216 BMEII0977 ATU4831 17 113 3.0E-25 T 22-04-2016 IPR020358 Uncharacterised protein family Y4oB APT61_RS12205 159f0e6552524d5054ef8c03e8de1a32 342 Gene3D G3DSA:3.40.50.2300 59 178 6.2E-35 T 22-04-2016 APT61_RS12205 159f0e6552524d5054ef8c03e8de1a32 342 SUPERFAMILY SSF53822 63 333 3.7E-52 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS12205 159f0e6552524d5054ef8c03e8de1a32 342 SUPERFAMILY SSF47413 5 64 2.28E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS12205 159f0e6552524d5054ef8c03e8de1a32 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 325 1.9E-73 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APT61_RS12205 159f0e6552524d5054ef8c03e8de1a32 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS12205 159f0e6552524d5054ef8c03e8de1a32 342 Gene3D G3DSA:1.10.260.40 7 58 2.9E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS12205 159f0e6552524d5054ef8c03e8de1a32 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 3.2E-17 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS12205 159f0e6552524d5054ef8c03e8de1a32 342 PANTHER PTHR30146 5 339 1.3E-92 T 22-04-2016 APT61_RS12205 159f0e6552524d5054ef8c03e8de1a32 342 PANTHER PTHR30146:SF4 5 339 1.3E-92 T 22-04-2016 APT61_RS12205 159f0e6552524d5054ef8c03e8de1a32 342 SMART SM00354 6 76 9.4E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS12205 159f0e6552524d5054ef8c03e8de1a32 342 Gene3D G3DSA:3.40.50.2300 179 324 1.8E-36 T 22-04-2016 APT61_RS18010 4977b941197f4cd86ee0681cae72aaa3 814 PANTHER PTHR10909:SF321 49 531 6.1E-305 T 22-04-2016 APT61_RS18010 4977b941197f4cd86ee0681cae72aaa3 814 PANTHER PTHR10909 49 531 6.1E-305 T 22-04-2016 APT61_RS18010 4977b941197f4cd86ee0681cae72aaa3 814 Gene3D G3DSA:1.10.540.10 95 232 1.6E-32 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APT61_RS18010 4977b941197f4cd86ee0681cae72aaa3 814 Gene3D G3DSA:2.40.110.10 237 348 3.6E-17 T 22-04-2016 APT61_RS18010 4977b941197f4cd86ee0681cae72aaa3 814 Gene3D G3DSA:1.20.140.10 349 505 9.8E-23 T 22-04-2016 APT61_RS18010 4977b941197f4cd86ee0681cae72aaa3 814 SUPERFAMILY SSF56645 117 355 2.75E-45 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APT61_RS18010 4977b941197f4cd86ee0681cae72aaa3 814 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 4.1E-117 T 22-04-2016 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00659 APT61_RS18010 4977b941197f4cd86ee0681cae72aaa3 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 232 2.4E-16 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APT61_RS18010 4977b941197f4cd86ee0681cae72aaa3 814 SUPERFAMILY SSF47203 360 515 1.77E-20 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APT61_RS18010 4977b941197f4cd86ee0681cae72aaa3 814 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 5.4E-9 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APT61_RS18010 4977b941197f4cd86ee0681cae72aaa3 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 504 3.6E-12 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APT61_RS04275 559f5638a261c46a9980d889386c21b8 392 PANTHER PTHR11014:SF63 8 390 3.0E-149 T 22-04-2016 APT61_RS04275 559f5638a261c46a9980d889386c21b8 392 PANTHER PTHR11014 8 390 3.0E-149 T 22-04-2016 APT61_RS04275 559f5638a261c46a9980d889386c21b8 392 Gene3D G3DSA:3.40.630.10 301 391 3.5E-99 T 22-04-2016 APT61_RS04275 559f5638a261c46a9980d889386c21b8 392 Gene3D G3DSA:3.40.630.10 5 181 3.5E-99 T 22-04-2016 APT61_RS04275 559f5638a261c46a9980d889386c21b8 392 SUPERFAMILY SSF55031 186 299 6.15E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS04275 559f5638a261c46a9980d889386c21b8 392 SUPERFAMILY SSF53187 301 391 9.58E-89 T 22-04-2016 APT61_RS04275 559f5638a261c46a9980d889386c21b8 392 SUPERFAMILY SSF53187 4 200 9.58E-89 T 22-04-2016 APT61_RS04275 559f5638a261c46a9980d889386c21b8 392 Pfam PF01546 Peptidase family M20/M25/M40 75 389 1.8E-35 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APT61_RS04275 559f5638a261c46a9980d889386c21b8 392 Gene3D G3DSA:3.30.70.360 184 300 1.0E-38 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS04275 559f5638a261c46a9980d889386c21b8 392 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 379 9.7E-110 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 APT61_RS04275 559f5638a261c46a9980d889386c21b8 392 Pfam PF07687 Peptidase dimerisation domain 188 280 1.9E-8 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS04275 559f5638a261c46a9980d889386c21b8 392 PIRSF PIRSF005962 1 392 1.8E-129 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 APT61_RS13510 93bf211b2a0f326496f8f8540adf27d1 717 Pfam PF00005 ABC transporter 503 646 4.1E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS13510 93bf211b2a0f326496f8f8540adf27d1 717 ProSitePatterns PS00211 ABC transporters family signature. 618 632 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS13510 93bf211b2a0f326496f8f8540adf27d1 717 SMART SM00382 507 694 6.8E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS13510 93bf211b2a0f326496f8f8540adf27d1 717 Gene3D G3DSA:1.20.1560.10 155 464 1.2E-43 T 22-04-2016 APT61_RS13510 93bf211b2a0f326496f8f8540adf27d1 717 PANTHER PTHR24221:SF260 152 699 4.8E-115 T 22-04-2016 APT61_RS13510 93bf211b2a0f326496f8f8540adf27d1 717 PANTHER PTHR24221 152 699 4.8E-115 T 22-04-2016 APT61_RS13510 93bf211b2a0f326496f8f8540adf27d1 717 SUPERFAMILY SSF52540 474 705 5.02E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13510 93bf211b2a0f326496f8f8540adf27d1 717 Pfam PF00664 ABC transporter transmembrane region 172 426 1.9E-15 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS13510 93bf211b2a0f326496f8f8540adf27d1 717 SUPERFAMILY SSF90123 155 467 3.53E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS13510 93bf211b2a0f326496f8f8540adf27d1 717 Gene3D G3DSA:3.40.50.300 480 705 9.2E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14975 ca136b6dae1c9330d70dee6e8abbae56 362 Pfam PF00266 Aminotransferase class-V 4 350 7.7E-68 T 22-04-2016 IPR000192 Aminotransferase class V domain APT61_RS14975 ca136b6dae1c9330d70dee6e8abbae56 362 PIRSF PIRSF000525 1 362 2.2E-148 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APT61_RS14975 ca136b6dae1c9330d70dee6e8abbae56 362 Gene3D G3DSA:3.40.640.10 17 258 2.9E-100 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS14975 ca136b6dae1c9330d70dee6e8abbae56 362 SUPERFAMILY SSF53383 4 362 2.46E-110 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS14975 ca136b6dae1c9330d70dee6e8abbae56 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 361 50.663 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APT61_RS14975 ca136b6dae1c9330d70dee6e8abbae56 362 Gene3D G3DSA:3.90.1150.10 260 361 1.4E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS14975 ca136b6dae1c9330d70dee6e8abbae56 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APT61_RS14975 ca136b6dae1c9330d70dee6e8abbae56 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 361 2.3E-152 T 22-04-2016 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|UniPathway: UPA00135|UniPathway: UPA00244 APT61_RS14975 ca136b6dae1c9330d70dee6e8abbae56 362 PANTHER PTHR21152:SF1 3 362 5.0E-186 T 22-04-2016 APT61_RS14975 ca136b6dae1c9330d70dee6e8abbae56 362 PANTHER PTHR21152 3 362 5.0E-186 T 22-04-2016 APT61_RS00370 d34d6b6aff3fb5c5a9a194c62fa5b6e1 219 Pfam PF03591 AzlC protein 19 154 1.7E-30 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease APT61_RS00370 d34d6b6aff3fb5c5a9a194c62fa5b6e1 219 PANTHER PTHR34979 11 217 9.1E-53 T 22-04-2016 APT61_RS18065 ffbeb5411ce238943bdc385a6867c007 300 Gene3D G3DSA:1.10.10.10 5 84 2.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18065 ffbeb5411ce238943bdc385a6867c007 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.2E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS18065 ffbeb5411ce238943bdc385a6867c007 300 Pfam PF03466 LysR substrate binding domain 90 293 3.0E-43 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS18065 ffbeb5411ce238943bdc385a6867c007 300 SUPERFAMILY SSF46785 6 113 6.71E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18065 ffbeb5411ce238943bdc385a6867c007 300 PANTHER PTHR30126:SF15 3 300 6.0E-153 T 22-04-2016 APT61_RS18065 ffbeb5411ce238943bdc385a6867c007 300 PANTHER PTHR30126 3 300 6.0E-153 T 22-04-2016 APT61_RS18065 ffbeb5411ce238943bdc385a6867c007 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS18065 ffbeb5411ce238943bdc385a6867c007 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS18065 ffbeb5411ce238943bdc385a6867c007 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.7E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS18065 ffbeb5411ce238943bdc385a6867c007 300 SUPERFAMILY SSF53850 90 297 1.17E-44 T 22-04-2016 APT61_RS18065 ffbeb5411ce238943bdc385a6867c007 300 Gene3D G3DSA:3.40.190.10 93 179 5.1E-24 T 22-04-2016 APT61_RS18065 ffbeb5411ce238943bdc385a6867c007 300 Gene3D G3DSA:3.40.190.10 180 258 9.8E-20 T 22-04-2016 APT61_RS02440 6975884185985bd57a266c40538a4796 307 SUPERFAMILY SSF46785 4 110 4.74E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS02440 6975884185985bd57a266c40538a4796 307 Pfam PF03466 LysR substrate binding domain 90 290 2.3E-40 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS02440 6975884185985bd57a266c40538a4796 307 SUPERFAMILY SSF53850 90 293 2.95E-41 T 22-04-2016 APT61_RS02440 6975884185985bd57a266c40538a4796 307 PANTHER PTHR30126 1 306 1.2E-162 T 22-04-2016 APT61_RS02440 6975884185985bd57a266c40538a4796 307 Gene3D G3DSA:1.10.10.10 3 87 1.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS02440 6975884185985bd57a266c40538a4796 307 Gene3D G3DSA:3.40.190.10 92 177 1.5E-22 T 22-04-2016 APT61_RS02440 6975884185985bd57a266c40538a4796 307 PANTHER PTHR30126:SF26 1 306 1.2E-162 T 22-04-2016 APT61_RS02440 6975884185985bd57a266c40538a4796 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.1E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS02440 6975884185985bd57a266c40538a4796 307 Gene3D G3DSA:3.40.190.10 178 260 2.2E-4 T 22-04-2016 APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 PANTHER PTHR30185:SF5 5 634 2.3E-218 T 22-04-2016 APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 Gene3D G3DSA:3.40.930.10 490 625 5.6E-24 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 SUPERFAMILY SSF55804 490 626 3.31E-25 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 PANTHER PTHR30185 5 634 2.3E-218 T 22-04-2016 APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 Pfam PF08279 HTH domain 7 63 4.0E-10 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 509 621 8.6E-16 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 SUPERFAMILY SSF52794 401 478 1.36E-6 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 Pfam PF00874 PRD domain 300 386 9.3E-19 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 Gene3D G3DSA:1.10.10.10 5 65 5.6E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 Gene3D G3DSA:1.10.10.10 91 151 9.3E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 Gene3D G3DSA:1.10.1790.10 294 391 4.9E-23 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 SUPERFAMILY SSF46785 5 63 9.62E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 SUPERFAMILY SSF63520 292 391 9.55E-22 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS19960 d05d3a65dcae50b8af3594457feb20f9 636 Pfam PF05043 Mga helix-turn-helix domain 91 165 1.1E-9 T 22-04-2016 IPR007737 Mga helix-turn-helix domain APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 SUPERFAMILY SSF81653 233 330 2.09E-19 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 Gene3D G3DSA:2.70.150.10 183 331 3.6E-24 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 PANTHER PTHR24093:SF126 34 700 2.1E-235 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 433 439 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 203 701 2.7E-78 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 180 726 1.5E-157 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 Gene3D G3DSA:3.40.1110.10 445 551 7.1E-19 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 PANTHER PTHR24093 34 700 2.1E-235 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 431 445 3.3E-28 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 280 294 3.3E-28 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 641 3.3E-28 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 645 657 3.3E-28 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 571 581 3.3E-28 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 549 560 3.3E-28 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 SUPERFAMILY SSF55008 47 109 1.83E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 Gene3D G3DSA:3.30.70.100 47 109 1.6E-17 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 Pfam PF00403 Heavy-metal-associated domain 52 108 2.1E-9 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 ProSitePatterns PS01047 Heavy-metal-associated domain. 52 81 - T 22-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 Pfam PF00122 E1-E2 ATPase 201 422 3.9E-57 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 Pfam PF00702 haloacid dehalogenase-like hydrolase 430 635 2.6E-36 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 Gene3D G3DSA:3.40.50.1000 404 444 1.2E-41 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 Gene3D G3DSA:3.40.50.1000 552 688 1.2E-41 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 SUPERFAMILY SSF81665 671 710 1.44E-17 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 SUPERFAMILY SSF81665 182 234 1.44E-17 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 SUPERFAMILY SSF81665 331 425 1.44E-17 T 22-04-2016 APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 SUPERFAMILY SSF56784 430 512 2.68E-51 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 SUPERFAMILY SSF56784 540 722 2.68E-51 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01460 72a7e38ac7fa2a08a38ae7105e9678ff 728 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 180 724 1.4E-173 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 APT61_RS08850 018149fa5e6dd981b8f6a50be31e309d 231 PANTHER PTHR11735:SF11 1 138 3.6E-59 T 22-04-2016 APT61_RS08850 018149fa5e6dd981b8f6a50be31e309d 231 PANTHER PTHR11735 1 138 3.6E-59 T 22-04-2016 APT61_RS08850 018149fa5e6dd981b8f6a50be31e309d 231 Gene3D G3DSA:3.30.420.40 1 132 7.9E-45 T 22-04-2016 APT61_RS08850 018149fa5e6dd981b8f6a50be31e309d 231 Pfam PF00814 Glycoprotease family 28 131 7.8E-28 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 APT61_RS08850 018149fa5e6dd981b8f6a50be31e309d 231 SUPERFAMILY SSF53067 3 105 1.12E-29 T 22-04-2016 APT61_RS08850 018149fa5e6dd981b8f6a50be31e309d 231 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 219 1.6E-67 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 APT61_RS08850 018149fa5e6dd981b8f6a50be31e309d 231 SUPERFAMILY SSF53067 108 217 1.42E-28 T 22-04-2016 APT61_RS15590 ed1d996b35920b6d0ce081f71fb7bc24 420 PANTHER PTHR30613 1 419 5.9E-297 T 22-04-2016 APT61_RS15590 ed1d996b35920b6d0ce081f71fb7bc24 420 SUPERFAMILY SSF51197 4 419 8.24E-151 T 22-04-2016 APT61_RS15590 ed1d996b35920b6d0ce081f71fb7bc24 420 Pfam PF07350 Protein of unknown function (DUF1479) 16 419 9.2E-142 T 22-04-2016 IPR010856 Protein of unknown function DUF1479 APT61_RS15590 ed1d996b35920b6d0ce081f71fb7bc24 420 PANTHER PTHR30613:SF4 1 419 5.9E-297 T 22-04-2016 APT61_RS15590 ed1d996b35920b6d0ce081f71fb7bc24 420 Gene3D G3DSA:2.60.120.330 3 419 7.0E-160 T 22-04-2016 IPR027443 Isopenicillin N synthase-like APT61_RS08510 def7acdea93cabe67d8948035950210b 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 1.5E-25 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 Gene3D G3DSA:3.30.1360.70 2 105 2.8E-34 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 SMART SM00836 460 577 1.1E-34 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 Gene3D G3DSA:1.10.730.10 454 577 3.3E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 SUPERFAMILY SSF52374 111 454 7.74E-96 T 22-04-2016 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 PANTHER PTHR11956 1 577 1.5E-266 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 28.81 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 1.6E-21 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 SUPERFAMILY SSF55190 2 101 6.54E-23 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 PANTHER PTHR11956:SF1 1 577 1.5E-266 T 22-04-2016 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 Gene3D G3DSA:3.40.50.620 112 453 2.7E-117 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS08510 def7acdea93cabe67d8948035950210b 577 Pfam PF05746 DALR anticodon binding domain 460 577 1.9E-34 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 Pfam PF00750 tRNA synthetases class I (R) 95 446 4.3E-173 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 SUPERFAMILY SSF47323 454 577 1.63E-34 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 1.2E-211 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APT61_RS08510 def7acdea93cabe67d8948035950210b 577 SMART SM01016 5 87 2.1E-28 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 APT61_RS00520 10b164d9a7f5c1835968d23b2056ffae 336 PIRSF PIRSF004532 1 333 4.4E-142 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APT61_RS00520 10b164d9a7f5c1835968d23b2056ffae 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 2.0E-133 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APT61_RS00520 10b164d9a7f5c1835968d23b2056ffae 336 SUPERFAMILY SSF56655 1 325 1.95E-112 T 22-04-2016 APT61_RS00520 10b164d9a7f5c1835968d23b2056ffae 336 Gene3D G3DSA:3.30.540.10 171 329 5.2E-49 T 22-04-2016 APT61_RS00520 10b164d9a7f5c1835968d23b2056ffae 336 Gene3D G3DSA:3.30.540.10 1 170 1.1E-69 T 22-04-2016 APT61_RS00520 10b164d9a7f5c1835968d23b2056ffae 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 334 3.1E-185 T 22-04-2016 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 APT61_RS00520 10b164d9a7f5c1835968d23b2056ffae 336 PANTHER PTHR30447 1 336 3.1E-187 T 22-04-2016 APT61_RS00520 10b164d9a7f5c1835968d23b2056ffae 336 PANTHER PTHR30447:SF0 1 336 3.1E-187 T 22-04-2016 APT61_RS21120 a59a4eb05ed5f514dfdd4956b97f391a 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APT61_RS21120 a59a4eb05ed5f514dfdd4956b97f391a 90 PANTHER PTHR33175:SF4 1 90 1.8E-59 T 22-04-2016 APT61_RS21120 a59a4eb05ed5f514dfdd4956b97f391a 90 SUPERFAMILY SSF47729 1 90 6.62E-32 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APT61_RS21120 a59a4eb05ed5f514dfdd4956b97f391a 90 PANTHER PTHR33175 1 90 1.8E-59 T 22-04-2016 APT61_RS21120 a59a4eb05ed5f514dfdd4956b97f391a 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.3E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS21120 a59a4eb05ed5f514dfdd4956b97f391a 90 Gene3D G3DSA:4.10.520.10 1 90 2.1E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APT61_RS21120 a59a4eb05ed5f514dfdd4956b97f391a 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 3.7E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS21120 a59a4eb05ed5f514dfdd4956b97f391a 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 3.7E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS21120 a59a4eb05ed5f514dfdd4956b97f391a 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 3.7E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS21120 a59a4eb05ed5f514dfdd4956b97f391a 90 SMART SM00411 1 90 1.7E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS16350 b12686dc8a5c808be45f2ed638dc6041 512 SUPERFAMILY SSF56317 218 490 1.96E-37 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APT61_RS16350 b12686dc8a5c808be45f2ed638dc6041 512 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 495 24.051 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 APT61_RS16350 b12686dc8a5c808be45f2ed638dc6041 512 PANTHER PTHR38686 2 512 1.2E-161 T 22-04-2016 APT61_RS16350 b12686dc8a5c808be45f2ed638dc6041 512 Gene3D G3DSA:3.60.110.10 218 481 3.9E-21 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APT61_RS16350 b12686dc8a5c808be45f2ed638dc6041 512 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 458 2.5E-116 T 22-04-2016 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 UniPathway: UPA00666 APT61_RS16350 b12686dc8a5c808be45f2ed638dc6041 512 Pfam PF00795 Carbon-nitrogen hydrolase 224 477 1.9E-40 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APT61_RS07160 4b1f9be147bbc61e4c0f27bd9faf5e14 328 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 241 321 9.9E-8 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APT61_RS07160 4b1f9be147bbc61e4c0f27bd9faf5e14 328 SMART SM00833 240 323 2.0E-6 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APT61_RS07160 4b1f9be147bbc61e4c0f27bd9faf5e14 328 SUPERFAMILY SSF52540 6 170 2.05E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07160 4b1f9be147bbc61e4c0f27bd9faf5e14 328 PANTHER PTHR13748 3 325 4.5E-80 T 22-04-2016 APT61_RS07160 4b1f9be147bbc61e4c0f27bd9faf5e14 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 163 1.0E-38 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APT61_RS07160 4b1f9be147bbc61e4c0f27bd9faf5e14 328 Gene3D G3DSA:3.40.50.300 3 188 6.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 112 590 1.2E-150 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 PANTHER PTHR30081 1 162 8.1E-228 T 22-04-2016 APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 PANTHER PTHR30081 302 602 8.1E-228 T 22-04-2016 APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 PANTHER PTHR30081 213 271 8.1E-228 T 22-04-2016 APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 603 46.041 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 Pfam PF07549 SecD/SecF GG Motif 109 128 9.5E-6 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 Gene3D G3DSA:1.20.1640.10 434 599 6.2E-25 T 22-04-2016 APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 Pfam PF02355 Protein export membrane protein 422 590 1.0E-14 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 334 583 2.1E-83 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 SUPERFAMILY SSF82866 326 338 3.66E-40 T 22-04-2016 APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 SUPERFAMILY SSF82866 399 595 3.66E-40 T 22-04-2016 APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 PANTHER PTHR30081:SF1 1 162 8.1E-228 T 22-04-2016 APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 PANTHER PTHR30081:SF1 302 602 8.1E-228 T 22-04-2016 APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 PANTHER PTHR30081:SF1 213 271 8.1E-228 T 22-04-2016 APT61_RS17465 d02173fca8f47893a5b84aa3766c7db6 604 Pfam PF13721 SecD export protein N-terminal TM region 1 92 2.3E-29 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 407 4.1E-157 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 PIRSF PIRSF037215 1 408 3.8E-182 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 Gene3D G3DSA:3.30.70.360 209 319 9.0E-43 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 Gene3D G3DSA:3.40.630.10 1 208 1.1E-117 T 22-04-2016 APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 Gene3D G3DSA:3.40.630.10 322 406 1.1E-117 T 22-04-2016 APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 PANTHER PTHR11014:SF3 2 91 1.5E-195 T 22-04-2016 APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 PANTHER PTHR11014:SF3 131 408 1.5E-195 T 22-04-2016 APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 Pfam PF07687 Peptidase dimerisation domain 206 302 1.3E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 SUPERFAMILY SSF53187 322 405 3.14E-84 T 22-04-2016 APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 SUPERFAMILY SSF53187 1 209 3.14E-84 T 22-04-2016 APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 SUPERFAMILY SSF55031 208 320 4.19E-42 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 PANTHER PTHR11014 2 91 1.5E-195 T 22-04-2016 APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 PANTHER PTHR11014 131 408 1.5E-195 T 22-04-2016 APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 Hamap MF_00550 Peptidase T [pepT]. 1 404 55.807 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APT61_RS13825 ae40329f83498abe26e9f062ade48e5d 408 Pfam PF01546 Peptidase family M20/M25/M40 139 402 3.8E-17 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APT61_RS18170 0e3cc3d85d827e62ece288f665e0aba8 129 SUPERFAMILY SSF54593 3 128 3.62E-34 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS18170 0e3cc3d85d827e62ece288f665e0aba8 129 Gene3D G3DSA:3.10.180.10 3 128 4.4E-38 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS18170 0e3cc3d85d827e62ece288f665e0aba8 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 1.2E-23 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APT61_RS16355 1d9f269757abdf2712d8f928008f16dd 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 271 6.1E-46 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS16355 1d9f269757abdf2712d8f928008f16dd 302 PANTHER PTHR30085 10 300 1.2E-137 T 22-04-2016 APT61_RS16355 1d9f269757abdf2712d8f928008f16dd 302 Gene3D G3DSA:3.40.190.10 127 233 2.1E-31 T 22-04-2016 APT61_RS16355 1d9f269757abdf2712d8f928008f16dd 302 Gene3D G3DSA:3.40.190.10 234 276 2.6E-29 T 22-04-2016 APT61_RS16355 1d9f269757abdf2712d8f928008f16dd 302 Gene3D G3DSA:3.40.190.10 38 126 2.6E-29 T 22-04-2016 APT61_RS16355 1d9f269757abdf2712d8f928008f16dd 302 SMART SM00062 41 273 1.8E-67 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS16355 1d9f269757abdf2712d8f928008f16dd 302 SUPERFAMILY SSF53850 13 274 9.62E-62 T 22-04-2016 APT61_RS16355 1d9f269757abdf2712d8f928008f16dd 302 PANTHER PTHR30085:SF2 10 300 1.2E-137 T 22-04-2016 APT61_RS11410 beefa1baa79f8095b3991598f21d9c68 194 Gene3D G3DSA:3.90.79.10 9 191 2.3E-51 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS11410 beefa1baa79f8095b3991598f21d9c68 194 SUPERFAMILY SSF55811 14 191 3.01E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS11410 beefa1baa79f8095b3991598f21d9c68 194 PANTHER PTHR11839 5 185 2.8E-37 T 22-04-2016 APT61_RS11410 beefa1baa79f8095b3991598f21d9c68 194 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 13 187 1.7E-42 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 APT61_RS10265 6dffaf26c77afe9155c89428906b038b 420 SUPERFAMILY SSF100879 249 345 1.53E-7 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS10265 6dffaf26c77afe9155c89428906b038b 420 Pfam PF11798 IMS family HHH motif 170 199 2.5E-6 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS10265 6dffaf26c77afe9155c89428906b038b 420 Gene3D G3DSA:3.30.1490.100 248 350 1.2E-6 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS10265 6dffaf26c77afe9155c89428906b038b 420 Pfam PF11799 impB/mucB/samB family C-terminal domain 242 351 6.7E-12 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS10265 6dffaf26c77afe9155c89428906b038b 420 Pfam PF13438 Domain of unknown function (DUF4113) 371 419 2.1E-21 T 22-04-2016 IPR025188 Domain of unknown function DUF4113 APT61_RS10265 6dffaf26c77afe9155c89428906b038b 420 SUPERFAMILY SSF56672 1 235 5.6E-67 T 22-04-2016 APT61_RS10265 6dffaf26c77afe9155c89428906b038b 420 Pfam PF00817 impB/mucB/samB family 5 148 2.3E-34 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS10265 6dffaf26c77afe9155c89428906b038b 420 Gene3D G3DSA:3.30.70.270 66 156 2.1E-25 T 22-04-2016 APT61_RS10265 6dffaf26c77afe9155c89428906b038b 420 PANTHER PTHR11076 1 406 1.5E-198 T 22-04-2016 APT61_RS10265 6dffaf26c77afe9155c89428906b038b 420 PANTHER PTHR11076:SF40 1 406 1.5E-198 T 22-04-2016 APT61_RS10265 6dffaf26c77afe9155c89428906b038b 420 Gene3D G3DSA:1.10.150.20 169 238 1.8E-21 T 22-04-2016 APT61_RS18300 deaf35618808452c6a03c65a8ea937ee 232 Gene3D G3DSA:3.40.50.1580 1 229 2.8E-76 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APT61_RS18300 deaf35618808452c6a03c65a8ea937ee 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 5.3E-134 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 APT61_RS18300 deaf35618808452c6a03c65a8ea937ee 232 PANTHER PTHR21234:SF16 1 229 4.1E-60 T 22-04-2016 APT61_RS18300 deaf35618808452c6a03c65a8ea937ee 232 PANTHER PTHR21234 1 229 4.1E-60 T 22-04-2016 IPR018017 Nucleoside phosphorylase APT61_RS18300 deaf35618808452c6a03c65a8ea937ee 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 47.817 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 APT61_RS18300 deaf35618808452c6a03c65a8ea937ee 232 Pfam PF01048 Phosphorylase superfamily 2 226 4.3E-48 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APT61_RS18300 deaf35618808452c6a03c65a8ea937ee 232 SUPERFAMILY SSF53167 1 229 3.27E-74 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APT61_RS08260 61df29a1d961e47b24254a73fd25522f 380 SUPERFAMILY SSF54001 128 244 3.43E-26 T 22-04-2016 APT61_RS08260 61df29a1d961e47b24254a73fd25522f 380 SUPERFAMILY SSF54001 274 298 3.43E-26 T 22-04-2016 APT61_RS08260 61df29a1d961e47b24254a73fd25522f 380 SMART SM00460 212 295 4.2E-14 T 22-04-2016 IPR002931 Transglutaminase-like APT61_RS08260 61df29a1d961e47b24254a73fd25522f 380 Gene3D G3DSA:3.90.260.10 217 298 1.8E-6 T 22-04-2016 IPR002931 Transglutaminase-like APT61_RS08260 61df29a1d961e47b24254a73fd25522f 380 Pfam PF01841 Transglutaminase-like superfamily 165 293 3.0E-27 T 22-04-2016 IPR002931 Transglutaminase-like APT61_RS08260 61df29a1d961e47b24254a73fd25522f 380 PANTHER PTHR38339 1 380 1.3E-81 T 22-04-2016 APT61_RS09875 042daad07d6227ba69ebc0b317b48c5f 1137 Pfam PF06761 Intracellular multiplication and human macrophage-killing 415 732 2.7E-67 T 22-04-2016 IPR009612 ImcF-related APT61_RS09875 042daad07d6227ba69ebc0b317b48c5f 1137 PANTHER PTHR36153:SF1 371 1117 4.5E-133 T 22-04-2016 APT61_RS09875 042daad07d6227ba69ebc0b317b48c5f 1137 Pfam PF06744 Type VI secretion protein IcmF C-terminal 862 1059 1.1E-51 T 22-04-2016 IPR010623 Type VI secretion system IcmF, C-terminal APT61_RS09875 042daad07d6227ba69ebc0b317b48c5f 1137 PANTHER PTHR36153 371 1117 4.5E-133 T 22-04-2016 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 266 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 Pfam PF12833 Helix-turn-helix domain 193 271 4.7E-26 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 SUPERFAMILY SSF46689 223 272 6.27E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 SMART SM00342 187 270 4.9E-33 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 SUPERFAMILY SSF51215 12 159 7.45E-14 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 Hamap MF_01534 HTH-type transcriptional activator RhaS [rhaS]. 1 273 55.115 T 22-04-2016 IPR023609 Transcription regulator HTH, RhaS GO:0003700|GO:0006355|GO:0019299 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 PANTHER PTHR11019 1 278 1.8E-176 T 22-04-2016 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 Gene3D G3DSA:1.10.10.60 224 272 9.0E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 Pfam PF02311 AraC-like ligand binding domain 18 153 1.5E-21 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 2.4E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 2.4E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 PANTHER PTHR11019:SF86 1 278 1.8E-176 T 22-04-2016 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 Gene3D G3DSA:2.60.120.280 10 159 6.5E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 SUPERFAMILY SSF46689 170 221 7.97E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS00440 34887fd1038a9b41d66cb29e608a7876 278 Gene3D G3DSA:1.10.10.60 168 223 6.8E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS22065 c4361eccf5ea8a9895e41d0d4e8d45b9 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 4.3E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS22065 c4361eccf5ea8a9895e41d0d4e8d45b9 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 4.3E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS22065 c4361eccf5ea8a9895e41d0d4e8d45b9 249 Gene3D G3DSA:1.20.120.530 92 235 2.6E-27 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS22065 c4361eccf5ea8a9895e41d0d4e8d45b9 249 Pfam PF07729 FCD domain 94 223 4.6E-20 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS22065 c4361eccf5ea8a9895e41d0d4e8d45b9 249 Gene3D G3DSA:1.10.10.10 6 74 5.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS22065 c4361eccf5ea8a9895e41d0d4e8d45b9 249 SUPERFAMILY SSF48008 93 232 8.11E-23 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS22065 c4361eccf5ea8a9895e41d0d4e8d45b9 249 SUPERFAMILY SSF46785 8 76 1.98E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS22065 c4361eccf5ea8a9895e41d0d4e8d45b9 249 PANTHER PTHR11751:SF421 1 110 3.4E-48 T 22-04-2016 APT61_RS22065 c4361eccf5ea8a9895e41d0d4e8d45b9 249 PANTHER PTHR11751 1 110 3.4E-48 T 22-04-2016 APT61_RS22065 c4361eccf5ea8a9895e41d0d4e8d45b9 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.3E-20 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS22065 c4361eccf5ea8a9895e41d0d4e8d45b9 249 SMART SM00345 13 72 1.4E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS22065 c4361eccf5ea8a9895e41d0d4e8d45b9 249 SMART SM00895 94 224 1.1E-20 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS12830 fc54352a8a12d1fcdd981140455c9f22 272 PANTHER PTHR36839 2 259 5.4E-95 T 22-04-2016 APT61_RS12830 fc54352a8a12d1fcdd981140455c9f22 272 PANTHER PTHR36839:SF1 2 259 5.4E-95 T 22-04-2016 APT61_RS12830 fc54352a8a12d1fcdd981140455c9f22 272 SUPERFAMILY SSF56281 51 238 2.44E-30 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS12830 fc54352a8a12d1fcdd981140455c9f22 272 Gene3D G3DSA:3.60.15.10 53 253 2.7E-38 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS12830 fc54352a8a12d1fcdd981140455c9f22 272 SMART SM00849 71 225 8.8E-5 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS02525 6fac9c6d5bfd1be1c6889034d75de517 235 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 142 3.3E-23 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 APT61_RS02525 6fac9c6d5bfd1be1c6889034d75de517 235 SUPERFAMILY SSF49584 146 228 1.06E-10 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APT61_RS02525 6fac9c6d5bfd1be1c6889034d75de517 235 Gene3D G3DSA:2.60.40.1070 146 215 4.3E-8 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APT61_RS02525 6fac9c6d5bfd1be1c6889034d75de517 235 SUPERFAMILY SSF49354 24 142 5.23E-26 T 22-04-2016 IPR008962 PapD-like APT61_RS02525 6fac9c6d5bfd1be1c6889034d75de517 235 PANTHER PTHR30251:SF3 1 234 4.5E-97 T 22-04-2016 APT61_RS02525 6fac9c6d5bfd1be1c6889034d75de517 235 PANTHER PTHR30251 1 234 4.5E-97 T 22-04-2016 APT61_RS02525 6fac9c6d5bfd1be1c6889034d75de517 235 Gene3D G3DSA:2.60.40.360 29 142 2.4E-18 T 22-04-2016 IPR008962 PapD-like APT61_RS02525 6fac9c6d5bfd1be1c6889034d75de517 235 PRINTS PR00969 Pili chaperone signature 158 173 1.9E-7 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APT61_RS02525 6fac9c6d5bfd1be1c6889034d75de517 235 PRINTS PR00969 Pili chaperone signature 124 139 1.9E-7 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APT61_RS02525 6fac9c6d5bfd1be1c6889034d75de517 235 PRINTS PR00969 Pili chaperone signature 73 94 1.9E-7 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APT61_RS09000 22fd551bbb5bc9436538687e5006da91 375 SUPERFAMILY SSF56645 6 199 5.5E-27 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APT61_RS09000 22fd551bbb5bc9436538687e5006da91 375 SUPERFAMILY SSF47203 209 367 1.77E-16 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APT61_RS09000 22fd551bbb5bc9436538687e5006da91 375 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 16 84 2.8E-5 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APT61_RS09000 22fd551bbb5bc9436538687e5006da91 375 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 224 353 5.4E-25 T 22-04-2016 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain APT61_RS09000 22fd551bbb5bc9436538687e5006da91 375 PIRSF PIRSF016578 1 372 1.8E-93 T 22-04-2016 APT61_RS09000 22fd551bbb5bc9436538687e5006da91 375 Gene3D G3DSA:2.40.110.10 110 192 6.7E-22 T 22-04-2016 APT61_RS09000 22fd551bbb5bc9436538687e5006da91 375 Gene3D G3DSA:1.10.540.10 6 107 2.4E-32 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 APT61_RS09000 22fd551bbb5bc9436538687e5006da91 375 PANTHER PTHR10909 1 343 1.8E-77 T 22-04-2016 APT61_RS09000 22fd551bbb5bc9436538687e5006da91 375 PANTHER PTHR10909:SF279 1 343 1.8E-77 T 22-04-2016 APT61_RS09000 22fd551bbb5bc9436538687e5006da91 375 Gene3D G3DSA:1.20.140.10 193 373 1.4E-39 T 22-04-2016 APT61_RS16455 e75c48bd965cfaebafe29705535b34ef 67 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 67 27.925 T 22-04-2016 IPR024905 Sec-independent protein translocase protein TatE APT61_RS16455 e75c48bd965cfaebafe29705535b34ef 67 PANTHER PTHR33162:SF2 1 55 1.3E-28 T 22-04-2016 APT61_RS16455 e75c48bd965cfaebafe29705535b34ef 67 PANTHER PTHR33162 1 55 1.3E-28 T 22-04-2016 APT61_RS16455 e75c48bd965cfaebafe29705535b34ef 67 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 47 2.2E-20 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APT61_RS16455 e75c48bd965cfaebafe29705535b34ef 67 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 67 21.323 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APT61_RS16455 e75c48bd965cfaebafe29705535b34ef 67 Pfam PF02416 mttA/Hcf106 family 4 54 2.1E-12 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 APT61_RS15725 fb6fbfbc2a995ca542024794b10948ec 824 PANTHER PTHR30451:SF2 1 824 0.0 T 22-04-2016 APT61_RS15725 fb6fbfbc2a995ca542024794b10948ec 824 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 292 302 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site APT61_RS15725 fb6fbfbc2a995ca542024794b10948ec 824 Pfam PF13953 PapC C-terminal domain 745 808 3.8E-24 T 22-04-2016 IPR025949 PapC-like, C-terminal domain APT61_RS15725 fb6fbfbc2a995ca542024794b10948ec 824 Pfam PF13954 PapC N-terminal domain 13 160 1.5E-40 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 APT61_RS15725 fb6fbfbc2a995ca542024794b10948ec 824 SUPERFAMILY SSF141729 12 135 2.22E-26 T 22-04-2016 APT61_RS15725 fb6fbfbc2a995ca542024794b10948ec 824 Pfam PF00577 Outer membrane usher protein 177 736 8.2E-190 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APT61_RS15725 fb6fbfbc2a995ca542024794b10948ec 824 PANTHER PTHR30451 1 824 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APT61_RS11935 a7d15fa1d40b2da97a26ed3683692c17 291 PANTHER PTHR11732 7 290 6.3E-125 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS11935 a7d15fa1d40b2da97a26ed3683692c17 291 Pfam PF00248 Aldo/keto reductase family 21 287 1.3E-49 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS11935 a7d15fa1d40b2da97a26ed3683692c17 291 PRINTS PR00069 Aldo-keto reductase signature 221 245 5.7E-11 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS11935 a7d15fa1d40b2da97a26ed3683692c17 291 PRINTS PR00069 Aldo-keto reductase signature 51 75 5.7E-11 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS11935 a7d15fa1d40b2da97a26ed3683692c17 291 PRINTS PR00069 Aldo-keto reductase signature 116 134 5.7E-11 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS11935 a7d15fa1d40b2da97a26ed3683692c17 291 PRINTS PR00069 Aldo-keto reductase signature 151 168 5.7E-11 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS11935 a7d15fa1d40b2da97a26ed3683692c17 291 PANTHER PTHR11732:SF136 7 290 6.3E-125 T 22-04-2016 APT61_RS11935 a7d15fa1d40b2da97a26ed3683692c17 291 SUPERFAMILY SSF51430 13 288 4.45E-64 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS11935 a7d15fa1d40b2da97a26ed3683692c17 291 Gene3D G3DSA:3.20.20.100 15 290 2.7E-61 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS13610 88aa3fedf0d2a30da4fc173c910a0183 245 Pfam PF16461 Lambda phage tail tube protein, TTP 4 154 4.3E-62 T 22-04-2016 IPR032494 Lambda phage tail tube protein APT61_RS13610 88aa3fedf0d2a30da4fc173c910a0183 245 SMART SM00635 161 241 9.9E-22 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 APT61_RS13610 88aa3fedf0d2a30da4fc173c910a0183 245 Gene3D G3DSA:2.60.40.1080 161 245 1.6E-14 T 22-04-2016 APT61_RS13610 88aa3fedf0d2a30da4fc173c910a0183 245 SUPERFAMILY SSF49373 160 244 1.1E-10 T 22-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments APT61_RS13610 88aa3fedf0d2a30da4fc173c910a0183 245 Pfam PF02368 Bacterial Ig-like domain (group 2) 161 242 1.9E-15 T 22-04-2016 IPR003343 Bacterial Ig-like, group 2 APT61_RS18460 3724ffdaf284a488fa77c5da9f5fa3de 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 1.1E-42 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 APT61_RS18460 3724ffdaf284a488fa77c5da9f5fa3de 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 8.0E-61 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 APT61_RS18460 3724ffdaf284a488fa77c5da9f5fa3de 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 29.722 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 APT61_RS18460 3724ffdaf284a488fa77c5da9f5fa3de 120 PIRSF PIRSF006287 1 120 4.0E-49 T 22-04-2016 IPR008249 Uncharacterised protein family UPF0231 APT61_RS09410 460682a26e8a0e2bf79c5106a3f35bca 302 PANTHER PTHR30465:SF9 17 302 2.3E-141 T 22-04-2016 APT61_RS09410 460682a26e8a0e2bf79c5106a3f35bca 302 SUPERFAMILY SSF161098 100 283 2.22E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09410 460682a26e8a0e2bf79c5106a3f35bca 302 PANTHER PTHR30465 17 302 2.3E-141 T 22-04-2016 APT61_RS09410 460682a26e8a0e2bf79c5106a3f35bca 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 70 5.5E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT61_RS09410 460682a26e8a0e2bf79c5106a3f35bca 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 6.7E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09410 460682a26e8a0e2bf79c5106a3f35bca 302 Gene3D G3DSA:1.10.3720.10 102 299 5.8E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS01635 18962064b2784a9237f1f447950b828c 431 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 2.3E-156 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APT61_RS01635 18962064b2784a9237f1f447950b828c 431 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APT61_RS01635 18962064b2784a9237f1f447950b828c 431 Pfam PF00483 Nucleotidyl transferase 22 291 2.0E-70 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APT61_RS01635 18962064b2784a9237f1f447950b828c 431 SUPERFAMILY SSF51161 312 411 2.91E-19 T 22-04-2016 IPR011004 Trimeric LpxA-like APT61_RS01635 18962064b2784a9237f1f447950b828c 431 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APT61_RS01635 18962064b2784a9237f1f447950b828c 431 PANTHER PTHR22572:SF10 21 398 5.6E-184 T 22-04-2016 APT61_RS01635 18962064b2784a9237f1f447950b828c 431 SUPERFAMILY SSF53448 378 392 7.66E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS01635 18962064b2784a9237f1f447950b828c 431 SUPERFAMILY SSF53448 20 294 7.66E-78 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS01635 18962064b2784a9237f1f447950b828c 431 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APT61_RS01635 18962064b2784a9237f1f447950b828c 431 PANTHER PTHR22572 21 398 5.6E-184 T 22-04-2016 APT61_RS01635 18962064b2784a9237f1f447950b828c 431 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 52.677 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 APT61_RS01635 18962064b2784a9237f1f447950b828c 431 Gene3D G3DSA:3.90.550.10 344 386 7.6E-80 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS01635 18962064b2784a9237f1f447950b828c 431 Gene3D G3DSA:3.90.550.10 22 301 7.6E-80 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS03450 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APT61_RS03450 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APT61_RS03450 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APT61_RS03450 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APT61_RS03450 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APT61_RS03450 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APT61_RS03450 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APT61_RS03450 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 22-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS03450 e0f63aa874b218a4c9d359851efe3e90 71 PANTHER PTHR21109 1 71 2.6E-27 T 22-04-2016 APT61_RS03450 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 5.1E-22 T 22-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 APT61_RS16020 b184d8b7cf181bd034c6691f8e119e35 264 Pfam PF13525 Outer membrane lipoprotein 143 262 1.3E-8 T 22-04-2016 APT61_RS16020 b184d8b7cf181bd034c6691f8e119e35 264 Pfam PF16331 TolA binding protein trimerisation 37 111 2.7E-24 T 22-04-2016 IPR032519 YbgF, trimerisation domain GO:0070206 APT61_RS16020 b184d8b7cf181bd034c6691f8e119e35 264 PANTHER PTHR26312:SF74 17 31 6.5E-42 T 22-04-2016 APT61_RS16020 b184d8b7cf181bd034c6691f8e119e35 264 PANTHER PTHR26312:SF74 155 260 6.5E-42 T 22-04-2016 APT61_RS16020 b184d8b7cf181bd034c6691f8e119e35 264 PANTHER PTHR26312 17 31 6.5E-42 T 22-04-2016 APT61_RS16020 b184d8b7cf181bd034c6691f8e119e35 264 PANTHER PTHR26312 155 260 6.5E-42 T 22-04-2016 APT61_RS16020 b184d8b7cf181bd034c6691f8e119e35 264 Gene3D G3DSA:1.25.40.10 145 250 3.7E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS16020 b184d8b7cf181bd034c6691f8e119e35 264 SUPERFAMILY SSF48452 140 256 1.11E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS16020 b184d8b7cf181bd034c6691f8e119e35 264 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 144 260 9.3E-40 T 22-04-2016 IPR014162 Tol-Pal system, YbgF APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 SUPERFAMILY SSF51905 469 628 1.72E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 Gene3D G3DSA:3.20.20.70 4 361 4.2E-120 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 619 635 5.3E-11 T 22-04-2016 APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 378 397 5.3E-11 T 22-04-2016 APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 498 516 5.3E-11 T 22-04-2016 APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 377 650 3.6E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 332 3.0E-94 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 PANTHER PTHR22893 3 418 5.0E-245 T 22-04-2016 APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 Gene3D G3DSA:3.50.50.60 362 464 1.3E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 Gene3D G3DSA:3.50.50.60 470 626 4.9E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 SUPERFAMILY SSF51395 3 363 5.92E-108 T 22-04-2016 APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 399 5.3E-5 T 22-04-2016 APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 620 634 5.3E-5 T 22-04-2016 APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 PANTHER PTHR22893:SF25 3 418 5.0E-245 T 22-04-2016 APT61_RS03100 8436fbdbdae6f09dc26f2c5fc7a29e54 673 SUPERFAMILY SSF51971 334 519 4.41E-40 T 22-04-2016 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 1.8E-44 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 5.6E-31 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 PANTHER PTHR22573 1 444 1.0E-185 T 22-04-2016 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 Gene3D G3DSA:3.30.310.50 359 443 1.1E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 Gene3D G3DSA:3.40.120.10 4 151 8.2E-47 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 4.7E-20 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 SUPERFAMILY SSF53738 2 181 1.81E-48 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 1.0E-197 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 SUPERFAMILY SSF53738 156 256 3.77E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 PANTHER PTHR22573:SF15 1 444 1.0E-185 T 22-04-2016 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 SUPERFAMILY SSF53738 258 365 8.24E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 Gene3D G3DSA:3.40.120.10 176 250 1.5E-26 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 Gene3D G3DSA:3.40.120.10 251 358 1.4E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 3.1E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 3.1E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 3.1E-14 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.822 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 SUPERFAMILY SSF55957 357 444 1.14E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS02780 704c96fc0c4164e96b4171e4af506536 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 5.4E-15 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS12560 0c719a307a52794af09ce840de2d10ad 350 PANTHER PTHR30578 3 350 8.2E-166 T 22-04-2016 APT61_RS12560 0c719a307a52794af09ce840de2d10ad 350 PANTHER PTHR30578:SF0 3 350 8.2E-166 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APT61_RS12560 0c719a307a52794af09ce840de2d10ad 350 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 349 4.8E-146 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APT61_RS12560 0c719a307a52794af09ce840de2d10ad 350 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 350 28.633 T 22-04-2016 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 APT61_RS12560 0c719a307a52794af09ce840de2d10ad 350 Pfam PF03116 NQR2, RnfD, RnfE family 6 348 4.3E-107 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 APT61_RS20170 9d5bfab77c5b3127a650a6ed60d3adca 126 SUPERFAMILY SSF46785 13 120 7.31E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20170 9d5bfab77c5b3127a650a6ed60d3adca 126 PANTHER PTHR33204 7 123 6.2E-71 T 22-04-2016 APT61_RS20170 9d5bfab77c5b3127a650a6ed60d3adca 126 Gene3D G3DSA:1.10.10.10 4 124 3.5E-46 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20170 9d5bfab77c5b3127a650a6ed60d3adca 126 Pfam PF01638 HxlR-like helix-turn-helix 29 116 2.7E-32 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type APT61_RS20170 9d5bfab77c5b3127a650a6ed60d3adca 126 PANTHER PTHR33204:SF7 7 123 6.2E-71 T 22-04-2016 APT61_RS05190 3683c76f77f1be82bd13369bdccf9bca 281 SUPERFAMILY SSF52518 5 278 6.55E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS05190 3683c76f77f1be82bd13369bdccf9bca 281 PANTHER PTHR11624:SF86 5 275 8.1E-68 T 22-04-2016 APT61_RS05190 3683c76f77f1be82bd13369bdccf9bca 281 PANTHER PTHR11624 5 275 8.1E-68 T 22-04-2016 IPR033247 Transketolase family APT61_RS05190 3683c76f77f1be82bd13369bdccf9bca 281 Gene3D G3DSA:3.40.50.970 4 275 1.3E-82 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS05190 3683c76f77f1be82bd13369bdccf9bca 281 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 15 267 1.1E-37 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APT61_RS09420 251d904c7123253592c1813807670f06 334 PANTHER PTHR24220 13 329 2.5E-198 T 22-04-2016 APT61_RS09420 251d904c7123253592c1813807670f06 334 PANTHER PTHR24220:SF544 13 329 2.5E-198 T 22-04-2016 APT61_RS09420 251d904c7123253592c1813807670f06 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 329 5.8E-28 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS09420 251d904c7123253592c1813807670f06 334 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS09420 251d904c7123253592c1813807670f06 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 311 4.2E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS09420 251d904c7123253592c1813807670f06 334 Gene3D G3DSA:3.40.50.300 9 268 8.9E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09420 251d904c7123253592c1813807670f06 334 Pfam PF00005 ABC transporter 41 192 3.2E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS09420 251d904c7123253592c1813807670f06 334 SMART SM00382 49 242 2.4E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS09420 251d904c7123253592c1813807670f06 334 SUPERFAMILY SSF52540 23 264 2.85E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07600 94deb5b75f8ecd5772cc9f0651579086 471 PANTHER PTHR23501:SF36 1 470 0.0 T 22-04-2016 APT61_RS07600 94deb5b75f8ecd5772cc9f0651579086 471 SUPERFAMILY SSF103473 7 194 5.89E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS07600 94deb5b75f8ecd5772cc9f0651579086 471 SUPERFAMILY SSF103473 244 454 5.89E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS07600 94deb5b75f8ecd5772cc9f0651579086 471 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 465 47.303 T 22-04-2016 IPR023721 Multidrug resistance protein MdtD, putative APT61_RS07600 94deb5b75f8ecd5772cc9f0651579086 471 Pfam PF07690 Major Facilitator Superfamily 15 405 2.2E-44 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS07600 94deb5b75f8ecd5772cc9f0651579086 471 Gene3D G3DSA:1.20.1250.20 258 456 3.8E-13 T 22-04-2016 APT61_RS07600 94deb5b75f8ecd5772cc9f0651579086 471 Gene3D G3DSA:1.20.1250.20 10 194 3.0E-32 T 22-04-2016 APT61_RS07600 94deb5b75f8ecd5772cc9f0651579086 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 2.5E-7 T 22-04-2016 APT61_RS07600 94deb5b75f8ecd5772cc9f0651579086 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 2.5E-7 T 22-04-2016 APT61_RS07600 94deb5b75f8ecd5772cc9f0651579086 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 2.5E-7 T 22-04-2016 APT61_RS07600 94deb5b75f8ecd5772cc9f0651579086 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 2.5E-7 T 22-04-2016 APT61_RS07600 94deb5b75f8ecd5772cc9f0651579086 471 PANTHER PTHR23501 1 470 0.0 T 22-04-2016 APT61_RS12080 e80d57301fba846ba347ebf7a880420a 187 SMART SM00463 85 169 4.5E-13 T 22-04-2016 IPR002625 Smr domain APT61_RS12080 e80d57301fba846ba347ebf7a880420a 187 SUPERFAMILY SSF160443 90 169 2.22E-10 T 22-04-2016 IPR002625 Smr domain APT61_RS12080 e80d57301fba846ba347ebf7a880420a 187 PANTHER PTHR35562:SF2 1 179 1.9E-72 T 22-04-2016 APT61_RS12080 e80d57301fba846ba347ebf7a880420a 187 PANTHER PTHR35562 1 179 1.9E-72 T 22-04-2016 APT61_RS12080 e80d57301fba846ba347ebf7a880420a 187 Pfam PF01713 Smr domain 94 169 1.1E-17 T 22-04-2016 IPR002625 Smr domain APT61_RS04530 acaf602e018ad2573ca1204f04352241 131 PANTHER PTHR10584:SF191 6 67 5.3E-23 T 22-04-2016 APT61_RS04530 acaf602e018ad2573ca1204f04352241 131 PANTHER PTHR10584 6 67 5.3E-23 T 22-04-2016 APT61_RS04530 acaf602e018ad2573ca1204f04352241 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 6.0E-24 T 22-04-2016 IPR006696 Protein of unknown function DUF423 APT61_RS01720 5d43f93559b07937bd6143f90caa5353 75 Pfam PF04023 FeoA domain 16 71 2.0E-8 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APT61_RS01720 5d43f93559b07937bd6143f90caa5353 75 PANTHER PTHR33238 5 75 1.4E-23 T 22-04-2016 APT61_RS01720 5d43f93559b07937bd6143f90caa5353 75 SUPERFAMILY SSF50037 4 73 7.33E-17 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal APT61_RS01720 5d43f93559b07937bd6143f90caa5353 75 SMART SM00899 4 72 5.4E-9 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 7.4E-7 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 146 179 1.5E-5 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 6.1E-10 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.411 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 106 134 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 100 128 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 130 158 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 PANTHER PTHR22572 79 295 2.3E-62 T 22-04-2016 APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 Gene3D G3DSA:2.160.10.10 100 135 7.8E-10 T 22-04-2016 APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 Gene3D G3DSA:2.160.10.10 136 309 1.9E-41 T 22-04-2016 APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 8.3E-128 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.22 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 9.8E-21 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 APT61_RS18210 4504094e15f54efd2326f5237f2bc373 341 SUPERFAMILY SSF51161 33 316 7.47E-86 T 22-04-2016 IPR011004 Trimeric LpxA-like APT61_RS12865 321e4daf19b12cc32e0ec3a3f36705df 340 SUPERFAMILY SSF55021 262 339 2.63E-18 T 22-04-2016 APT61_RS12865 321e4daf19b12cc32e0ec3a3f36705df 340 Pfam PF00005 ABC transporter 21 169 6.5E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS12865 321e4daf19b12cc32e0ec3a3f36705df 340 Pfam PF09383 NIL domain 264 336 3.4E-16 T 22-04-2016 IPR018449 NIL domain APT61_RS12865 321e4daf19b12cc32e0ec3a3f36705df 340 SMART SM00930 262 337 1.9E-21 T 22-04-2016 IPR018449 NIL domain APT61_RS12865 321e4daf19b12cc32e0ec3a3f36705df 340 Gene3D G3DSA:3.40.50.300 1 236 1.8E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12865 321e4daf19b12cc32e0ec3a3f36705df 340 PANTHER PTHR24220:SF186 3 252 1.2E-149 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 APT61_RS12865 321e4daf19b12cc32e0ec3a3f36705df 340 PANTHER PTHR24220 3 252 1.2E-149 T 22-04-2016 APT61_RS12865 321e4daf19b12cc32e0ec3a3f36705df 340 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS12865 321e4daf19b12cc32e0ec3a3f36705df 340 Gene3D G3DSA:3.30.70.260 237 339 1.5E-23 T 22-04-2016 APT61_RS12865 321e4daf19b12cc32e0ec3a3f36705df 340 SMART SM00382 30 218 7.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS12865 321e4daf19b12cc32e0ec3a3f36705df 340 SUPERFAMILY SSF52540 1 240 1.32E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10415 c399d2c1c75eb83ff4312c9b21aa4fed 136 PIRSF PIRSF021320 2 136 4.8E-44 T 22-04-2016 IPR009326 Protein of unknown function DUF984 APT61_RS10415 c399d2c1c75eb83ff4312c9b21aa4fed 136 Pfam PF04266 ASCH domain 27 134 1.1E-23 T 22-04-2016 IPR007374 ASCH domain APT61_RS10415 c399d2c1c75eb83ff4312c9b21aa4fed 136 PANTHER PTHR39203 9 136 1.3E-36 T 22-04-2016 APT61_RS10415 c399d2c1c75eb83ff4312c9b21aa4fed 136 SMART SM01022 17 134 2.3E-40 T 22-04-2016 IPR007374 ASCH domain APT61_RS10415 c399d2c1c75eb83ff4312c9b21aa4fed 136 Gene3D G3DSA:3.10.400.10 3 135 5.9E-53 T 22-04-2016 APT61_RS10415 c399d2c1c75eb83ff4312c9b21aa4fed 136 SUPERFAMILY SSF88697 4 134 3.73E-44 T 22-04-2016 IPR015947 PUA-like domain APT61_RS11720 2bf757322e91682a783d0f643cf910b5 404 SMART SM00922 128 259 1.3E-14 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APT61_RS11720 2bf757322e91682a783d0f643cf910b5 404 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 110 2.9E-35 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APT61_RS11720 2bf757322e91682a783d0f643cf910b5 404 Gene3D G3DSA:3.30.390.10 1 119 2.2E-52 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS11720 2bf757322e91682a783d0f643cf910b5 404 Pfam PF13378 Enolase C-terminal domain-like 142 379 9.1E-42 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS11720 2bf757322e91682a783d0f643cf910b5 404 PANTHER PTHR13794:SF61 1 148 5.4E-285 T 22-04-2016 APT61_RS11720 2bf757322e91682a783d0f643cf910b5 404 PANTHER PTHR13794:SF61 183 404 5.4E-285 T 22-04-2016 APT61_RS11720 2bf757322e91682a783d0f643cf910b5 404 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 209 240 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APT61_RS11720 2bf757322e91682a783d0f643cf910b5 404 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 85 110 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APT61_RS11720 2bf757322e91682a783d0f643cf910b5 404 Gene3D G3DSA:3.20.20.120 120 367 3.6E-87 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS11720 2bf757322e91682a783d0f643cf910b5 404 SUPERFAMILY SSF51604 98 388 1.14E-78 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS11720 2bf757322e91682a783d0f643cf910b5 404 SUPERFAMILY SSF54826 1 112 1.02E-33 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS11720 2bf757322e91682a783d0f643cf910b5 404 PANTHER PTHR13794 1 148 5.4E-285 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APT61_RS11720 2bf757322e91682a783d0f643cf910b5 404 PANTHER PTHR13794 183 404 5.4E-285 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APT61_RS20655 20e94d056c1dfe42d074ec9524267c8f 259 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 16 258 3.3E-93 T 22-04-2016 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 APT61_RS20655 20e94d056c1dfe42d074ec9524267c8f 259 Gene3D G3DSA:1.10.3720.10 61 258 1.1E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS20655 20e94d056c1dfe42d074ec9524267c8f 259 PANTHER PTHR30043 1 256 8.4E-118 T 22-04-2016 APT61_RS20655 20e94d056c1dfe42d074ec9524267c8f 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 258 3.0E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS20655 20e94d056c1dfe42d074ec9524267c8f 259 PANTHER PTHR30043:SF1 1 256 8.4E-118 T 22-04-2016 APT61_RS20655 20e94d056c1dfe42d074ec9524267c8f 259 SUPERFAMILY SSF161098 62 253 3.27E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS20360 5a99830f7c2ec88d558d344c0b3e4773 153 Gene3D G3DSA:3.40.50.300 5 151 5.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20360 5a99830f7c2ec88d558d344c0b3e4773 153 PANTHER PTHR33540:SF2 1 151 1.7E-54 T 22-04-2016 APT61_RS20360 5a99830f7c2ec88d558d344c0b3e4773 153 PANTHER PTHR33540 1 151 1.7E-54 T 22-04-2016 APT61_RS20360 5a99830f7c2ec88d558d344c0b3e4773 153 SUPERFAMILY SSF52540 29 129 9.99E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20360 5a99830f7c2ec88d558d344c0b3e4773 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 2.1E-42 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APT61_RS20360 5a99830f7c2ec88d558d344c0b3e4773 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 8.1E-59 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 APT61_RS07650 2575ea0034044af8374abbdd170fe54c 527 Gene3D G3DSA:3.10.580.10 288 416 3.7E-14 T 22-04-2016 APT61_RS07650 2575ea0034044af8374abbdd170fe54c 527 Gene3D G3DSA:3.30.465.10 417 516 4.1E-26 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APT61_RS07650 2575ea0034044af8374abbdd170fe54c 527 Pfam PF00571 CBS domain 302 358 0.0019 T 22-04-2016 IPR000644 CBS domain APT61_RS07650 2575ea0034044af8374abbdd170fe54c 527 Pfam PF00571 CBS domain 373 422 9.9E-8 T 22-04-2016 IPR000644 CBS domain APT61_RS07650 2575ea0034044af8374abbdd170fe54c 527 PANTHER PTHR22777 1 527 0.0 T 22-04-2016 APT61_RS07650 2575ea0034044af8374abbdd170fe54c 527 Pfam PF03741 Integral membrane protein TerC family 14 203 5.5E-50 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 APT61_RS07650 2575ea0034044af8374abbdd170fe54c 527 SUPERFAMILY SSF54631 290 424 2.93E-24 T 22-04-2016 APT61_RS07650 2575ea0034044af8374abbdd170fe54c 527 SUPERFAMILY SSF56176 437 521 2.56E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APT61_RS07650 2575ea0034044af8374abbdd170fe54c 527 PANTHER PTHR22777:SF14 1 527 0.0 T 22-04-2016 APT61_RS07650 2575ea0034044af8374abbdd170fe54c 527 Pfam PF03471 Transporter associated domain 440 515 3.9E-19 T 22-04-2016 IPR005170 Transporter-associated domain APT61_RS07650 2575ea0034044af8374abbdd170fe54c 527 SMART SM01091 439 518 7.0E-23 T 22-04-2016 IPR005170 Transporter-associated domain APT61_RS11065 13a47b4f535671270f73c53070732e89 631 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 331 423 1.3E-10 T 22-04-2016 IPR018712 Domain of unknown function DUF2235 APT61_RS11065 13a47b4f535671270f73c53070732e89 631 PANTHER PTHR37465:SF1 1 107 1.3E-14 T 22-04-2016 APT61_RS11065 13a47b4f535671270f73c53070732e89 631 Pfam PF05488 PAAR motif 10 68 2.5E-10 T 22-04-2016 IPR008727 PAAR motif APT61_RS11065 13a47b4f535671270f73c53070732e89 631 PANTHER PTHR37465 1 107 1.3E-14 T 22-04-2016 APT61_RS03550 cbcae520c3e61db2539e3a3c414b7cff 98 PANTHER PTHR38040 2 95 2.8E-40 T 22-04-2016 APT61_RS03550 cbcae520c3e61db2539e3a3c414b7cff 98 PANTHER PTHR38040:SF1 2 95 2.8E-40 T 22-04-2016 APT61_RS03550 cbcae520c3e61db2539e3a3c414b7cff 98 Pfam PF04380 Membrane fusogenic activity 1 77 4.0E-28 T 22-04-2016 IPR007475 Membrane fusogenic activity APT61_RS02190 bd3e20c963305b4177595a01c18c1c87 122 Pfam PF09350 Domain of unknown function (DUF1992) 7 73 3.2E-24 T 22-04-2016 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain APT61_RS02190 bd3e20c963305b4177595a01c18c1c87 122 PANTHER PTHR39158 1 121 2.0E-36 T 22-04-2016 APT61_RS07935 c4bc9fcc6dce8addcfc48a74895840b4 317 PANTHER PTHR30582:SF8 32 309 2.8E-135 T 22-04-2016 APT61_RS07935 c4bc9fcc6dce8addcfc48a74895840b4 317 Gene3D G3DSA:2.40.440.10 90 231 2.6E-35 T 22-04-2016 APT61_RS07935 c4bc9fcc6dce8addcfc48a74895840b4 317 SUPERFAMILY SSF141523 174 231 4.97E-29 T 22-04-2016 APT61_RS07935 c4bc9fcc6dce8addcfc48a74895840b4 317 SUPERFAMILY SSF141523 95 145 4.97E-29 T 22-04-2016 APT61_RS07935 c4bc9fcc6dce8addcfc48a74895840b4 317 PANTHER PTHR30582 32 309 2.8E-135 T 22-04-2016 APT61_RS07935 c4bc9fcc6dce8addcfc48a74895840b4 317 Pfam PF03734 L,D-transpeptidase catalytic domain 97 229 1.0E-18 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APT61_RS22185 a5e58fc9b596c27f5d77f546f9d58a9a 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 6.5E-9 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS22185 a5e58fc9b596c27f5d77f546f9d58a9a 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 268 300 2.6E-6 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS22185 a5e58fc9b596c27f5d77f546f9d58a9a 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 353 382 0.0029 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS22185 a5e58fc9b596c27f5d77f546f9d58a9a 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 42.727 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 APT61_RS22185 a5e58fc9b596c27f5d77f546f9d58a9a 456 Gene3D G3DSA:3.90.550.10 3 243 9.1E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS22185 a5e58fc9b596c27f5d77f546f9d58a9a 456 PANTHER PTHR22572 7 449 1.6E-231 T 22-04-2016 APT61_RS22185 a5e58fc9b596c27f5d77f546f9d58a9a 456 Gene3D G3DSA:2.160.10.10 244 323 3.8E-18 T 22-04-2016 APT61_RS22185 a5e58fc9b596c27f5d77f546f9d58a9a 456 SUPERFAMILY SSF51161 262 440 5.05E-52 T 22-04-2016 IPR011004 Trimeric LpxA-like APT61_RS22185 a5e58fc9b596c27f5d77f546f9d58a9a 456 SUPERFAMILY SSF53448 5 252 3.34E-65 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS22185 a5e58fc9b596c27f5d77f546f9d58a9a 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APT61_RS22185 a5e58fc9b596c27f5d77f546f9d58a9a 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 4.5E-204 T 22-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 APT61_RS22185 a5e58fc9b596c27f5d77f546f9d58a9a 456 PANTHER PTHR22572:SF115 7 449 1.6E-231 T 22-04-2016 APT61_RS22185 a5e58fc9b596c27f5d77f546f9d58a9a 456 Gene3D G3DSA:2.160.10.10 324 455 3.2E-37 T 22-04-2016 APT61_RS22185 a5e58fc9b596c27f5d77f546f9d58a9a 456 Pfam PF12804 MobA-like NTP transferase domain 8 123 3.4E-20 T 22-04-2016 IPR025877 MobA-like NTP transferase APT61_RS03835 08ecbe9e59b67a4675ce2d2d305f6d1c 325 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS03835 08ecbe9e59b67a4675ce2d2d305f6d1c 325 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 317 1.8E-25 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS03835 08ecbe9e59b67a4675ce2d2d305f6d1c 325 PANTHER PTHR24220:SF535 6 324 3.0E-152 T 22-04-2016 APT61_RS03835 08ecbe9e59b67a4675ce2d2d305f6d1c 325 Pfam PF00005 ABC transporter 25 182 4.0E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS03835 08ecbe9e59b67a4675ce2d2d305f6d1c 325 SMART SM00382 33 240 5.7E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS03835 08ecbe9e59b67a4675ce2d2d305f6d1c 325 PANTHER PTHR24220 6 324 3.0E-152 T 22-04-2016 APT61_RS03835 08ecbe9e59b67a4675ce2d2d305f6d1c 325 SUPERFAMILY SSF52540 33 300 1.13E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03835 08ecbe9e59b67a4675ce2d2d305f6d1c 325 Gene3D G3DSA:3.40.50.300 3 255 5.0E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03835 08ecbe9e59b67a4675ce2d2d305f6d1c 325 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 1.6E-20 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS09805 a1ec0dd2b7404b6442fe350ffdb42a85 511 PANTHER PTHR35565:SF1 59 511 0.0 T 22-04-2016 APT61_RS09805 a1ec0dd2b7404b6442fe350ffdb42a85 511 PANTHER PTHR35565:SF1 1 41 0.0 T 22-04-2016 APT61_RS09805 a1ec0dd2b7404b6442fe350ffdb42a85 511 PANTHER PTHR35565 59 511 0.0 T 22-04-2016 APT61_RS09805 a1ec0dd2b7404b6442fe350ffdb42a85 511 PANTHER PTHR35565 1 41 0.0 T 22-04-2016 APT61_RS09805 a1ec0dd2b7404b6442fe350ffdb42a85 511 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 87 507 7.2E-169 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath APT61_RS09805 a1ec0dd2b7404b6442fe350ffdb42a85 511 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 53 507 3.3E-202 T 22-04-2016 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath APT61_RS04515 def35a44430e79e5fe22372c31e78e66 402 Gene3D G3DSA:3.90.1150.10 281 393 2.2E-19 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS04515 def35a44430e79e5fe22372c31e78e66 402 SUPERFAMILY SSF53383 6 396 8.07E-109 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS04515 def35a44430e79e5fe22372c31e78e66 402 Gene3D G3DSA:3.40.640.10 32 280 6.5E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS04515 def35a44430e79e5fe22372c31e78e66 402 PANTHER PTHR11601:SF44 1 402 4.3E-288 T 22-04-2016 APT61_RS04515 def35a44430e79e5fe22372c31e78e66 402 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 4.7E-224 T 22-04-2016 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APT61_RS04515 def35a44430e79e5fe22372c31e78e66 402 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APT61_RS04515 def35a44430e79e5fe22372c31e78e66 402 PANTHER PTHR11601 1 402 4.3E-288 T 22-04-2016 APT61_RS04515 def35a44430e79e5fe22372c31e78e66 402 Pfam PF00266 Aminotransferase class-V 21 388 4.8E-137 T 22-04-2016 IPR000192 Aminotransferase class V domain APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 53.298 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 22-04-2016 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 PANTHER PTHR23309:SF18 8 723 0.0 T 22-04-2016 APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 Gene3D G3DSA:1.10.1040.10 632 710 7.9E-17 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 627 690 5.2E-6 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 5.7E-26 T 22-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 Gene3D G3DSA:3.90.226.10 14 205 4.6E-59 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 SUPERFAMILY SSF48179 495 639 3.91E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 22-04-2016 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 SUPERFAMILY SSF48179 622 714 5.95E-23 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 SUPERFAMILY SSF52096 3 303 2.13E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 1.4E-60 T 22-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 PANTHER PTHR23309 8 723 0.0 T 22-04-2016 APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 205 8.8E-38 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 Gene3D G3DSA:3.40.50.720 304 497 1.9E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 Gene3D G3DSA:1.10.1040.10 498 593 3.4E-21 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS01125 c08d1107039c1f87dd9bd4471f35b51d 729 SUPERFAMILY SSF51735 314 495 3.12E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06270 8b662f0160e24aafb5b12e59b9095284 759 SMART SM00919 163 401 1.7E-141 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APT61_RS06270 8b662f0160e24aafb5b12e59b9095284 759 SMART SM01274 18 151 2.3E-82 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APT61_RS06270 8b662f0160e24aafb5b12e59b9095284 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 3.0E-101 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 APT61_RS06270 8b662f0160e24aafb5b12e59b9095284 759 Gene3D G3DSA:3.40.50.10380 12 160 1.4E-51 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APT61_RS06270 8b662f0160e24aafb5b12e59b9095284 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 APT61_RS06270 8b662f0160e24aafb5b12e59b9095284 759 SUPERFAMILY SSF53659 430 754 1.85E-90 T 22-04-2016 APT61_RS06270 8b662f0160e24aafb5b12e59b9095284 759 SUPERFAMILY SSF51735 163 453 2.2E-86 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06270 8b662f0160e24aafb5b12e59b9095284 759 SUPERFAMILY SSF53223 10 161 4.75E-54 T 22-04-2016 APT61_RS06270 8b662f0160e24aafb5b12e59b9095284 759 PANTHER PTHR23406 31 441 4.9E-177 T 22-04-2016 APT61_RS06270 8b662f0160e24aafb5b12e59b9095284 759 Gene3D G3DSA:3.40.50.720 161 449 4.4E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06270 8b662f0160e24aafb5b12e59b9095284 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 3.0E-19 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APT61_RS06270 8b662f0160e24aafb5b12e59b9095284 759 Gene3D G3DSA:3.40.50.10750 569 726 1.3E-54 T 22-04-2016 APT61_RS06270 8b662f0160e24aafb5b12e59b9095284 759 PIRSF PIRSF036684 1 758 0.0 T 22-04-2016 IPR012188 Malic enzyme, phosphate acetyl/butaryl transferase GO:0004473|GO:0005829|GO:0006108|GO:0016616|GO:0030145|GO:0046872|GO:0055114 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 APT61_RS06270 8b662f0160e24aafb5b12e59b9095284 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 9.2E-29 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 6 418 1.4E-137 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 Gene3D G3DSA:3.20.20.10 41 264 4.1E-64 T 22-04-2016 IPR029066 PLP-binding barrel APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 SUPERFAMILY SSF50621 255 419 2.01E-56 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 SUPERFAMILY SSF51419 25 277 5.52E-58 T 22-04-2016 IPR029066 PLP-binding barrel APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 39.102 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 PANTHER PTHR11482 16 418 4.2E-147 T 22-04-2016 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 8.6E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 8.6E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 8.6E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 8.6E-27 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 4.8E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 4.8E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 4.8E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 4.8E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 4.8E-20 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 33 275 2.3E-61 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 PANTHER PTHR11482:SF5 16 418 4.2E-147 T 22-04-2016 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 280 395 2.1E-15 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 APT61_RS04355 cb1a09aac52981a5a2e0588c8e580b11 420 Gene3D G3DSA:2.40.37.10 265 419 2.4E-55 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 Pfam PF00384 Molybdopterin oxidoreductase 66 459 3.1E-78 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 Pfam PF04324 BFD-like [2Fe-2S] binding domain 785 832 5.5E-10 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 Gene3D G3DSA:3.40.228.10 128 225 6.7E-30 T 22-04-2016 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 Pfam PF01568 Molydopterin dinucleotide binding domain 543 653 4.3E-28 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 Gene3D G3DSA:2.40.40.20 540 659 1.4E-40 T 22-04-2016 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 PANTHER PTHR11615 3 677 3.3E-198 T 22-04-2016 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 SMART SM00926 1 54 4.1E-20 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 Gene3D G3DSA:3.40.228.10 232 288 9.1E-15 T 22-04-2016 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 PANTHER PTHR11615:SF119 3 677 3.3E-198 T 22-04-2016 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 SUPERFAMILY SSF50692 541 684 4.07E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 Gene3D G3DSA:3.40.50.740 289 311 8.2E-70 T 22-04-2016 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 Gene3D G3DSA:3.40.50.740 57 125 8.2E-70 T 22-04-2016 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 Gene3D G3DSA:3.40.50.740 344 493 8.2E-70 T 22-04-2016 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 SUPERFAMILY SSF53706 2 534 1.57E-166 T 22-04-2016 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 Gene3D G3DSA:2.20.25.90 2 51 1.4E-19 T 22-04-2016 APT61_RS09270 29fee17f0091e0fc26aaea90d8a5db64 836 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 51 5.9E-18 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS18440 502a1a3f7c20983a36ca7c95dc32d833 523 SUPERFAMILY SSF49503 32 167 1.46E-29 T 22-04-2016 IPR008972 Cupredoxin APT61_RS18440 502a1a3f7c20983a36ca7c95dc32d833 523 SUPERFAMILY SSF49503 172 306 1.63E-29 T 22-04-2016 IPR008972 Cupredoxin APT61_RS18440 502a1a3f7c20983a36ca7c95dc32d833 523 PANTHER PTHR11709 50 523 5.4E-117 T 22-04-2016 APT61_RS18440 502a1a3f7c20983a36ca7c95dc32d833 523 Gene3D G3DSA:2.60.40.420 33 171 8.7E-35 T 22-04-2016 IPR008972 Cupredoxin APT61_RS18440 502a1a3f7c20983a36ca7c95dc32d833 523 Pfam PF07732 Multicopper oxidase 55 166 5.1E-31 T 22-04-2016 IPR011707 Multicopper oxidase, type 3 GO:0005507 APT61_RS18440 502a1a3f7c20983a36ca7c95dc32d833 523 Gene3D G3DSA:2.60.40.420 172 311 7.1E-30 T 22-04-2016 IPR008972 Cupredoxin APT61_RS18440 502a1a3f7c20983a36ca7c95dc32d833 523 Gene3D G3DSA:2.60.40.420 389 523 6.3E-30 T 22-04-2016 IPR008972 Cupredoxin APT61_RS18440 502a1a3f7c20983a36ca7c95dc32d833 523 Pfam PF07731 Multicopper oxidase 408 523 4.4E-24 T 22-04-2016 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 APT61_RS18440 502a1a3f7c20983a36ca7c95dc32d833 523 SUPERFAMILY SSF49503 390 523 2.42E-28 T 22-04-2016 IPR008972 Cupredoxin APT61_RS18440 502a1a3f7c20983a36ca7c95dc32d833 523 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 1 22 1.6E-5 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APT61_RS18440 502a1a3f7c20983a36ca7c95dc32d833 523 Pfam PF00394 Multicopper oxidase 231 294 1.2E-4 T 22-04-2016 IPR001117 Multicopper oxidase, type 1 GO:0016491|GO:0055114 APT61_RS18440 502a1a3f7c20983a36ca7c95dc32d833 523 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 28 2.0E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APT61_RS18440 502a1a3f7c20983a36ca7c95dc32d833 523 ProSitePatterns PS00080 Multicopper oxidases signature 2. 506 517 - T 22-04-2016 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 APT61_RS18440 502a1a3f7c20983a36ca7c95dc32d833 523 PANTHER PTHR11709:SF2 50 523 5.4E-117 T 22-04-2016 APT61_RS11965 0e34e9485bebf8bfbf17a79d8080b5d0 79 PANTHER PTHR36572 2 79 4.5E-47 T 22-04-2016 APT61_RS11965 0e34e9485bebf8bfbf17a79d8080b5d0 79 Pfam PF06183 DinI-like family 16 76 8.6E-23 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APT61_RS11965 0e34e9485bebf8bfbf17a79d8080b5d0 79 Gene3D G3DSA:3.30.910.10 1 78 1.1E-26 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APT61_RS11965 0e34e9485bebf8bfbf17a79d8080b5d0 79 PANTHER PTHR36572:SF1 2 79 4.5E-47 T 22-04-2016 APT61_RS11965 0e34e9485bebf8bfbf17a79d8080b5d0 79 SUPERFAMILY SSF54857 1 78 8.89E-25 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APT61_RS12910 8ea0ee92e2ee8ff72edc1f5d930787ed 122 SUPERFAMILY SSF89360 18 111 4.51E-27 T 22-04-2016 IPR000361 FeS cluster biogenesis APT61_RS12910 8ea0ee92e2ee8ff72edc1f5d930787ed 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 19 121 6.8E-33 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 APT61_RS12910 8ea0ee92e2ee8ff72edc1f5d930787ed 122 Gene3D G3DSA:2.60.300.12 18 111 6.5E-29 T 22-04-2016 IPR000361 FeS cluster biogenesis APT61_RS12910 8ea0ee92e2ee8ff72edc1f5d930787ed 122 PANTHER PTHR10072:SF47 12 122 6.9E-76 T 22-04-2016 APT61_RS12910 8ea0ee92e2ee8ff72edc1f5d930787ed 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site APT61_RS12910 8ea0ee92e2ee8ff72edc1f5d930787ed 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 18 118 2.5E-19 T 22-04-2016 IPR000361 FeS cluster biogenesis APT61_RS12910 8ea0ee92e2ee8ff72edc1f5d930787ed 122 PANTHER PTHR10072 12 122 6.9E-76 T 22-04-2016 APT61_RS12910 8ea0ee92e2ee8ff72edc1f5d930787ed 122 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 17 122 2.9E-47 T 22-04-2016 IPR011298 FeS assembly scaffold SufA GO:0016226 APT61_RS21830 2102952642d6ec14fbd92b34c352b0c5 174 PANTHER PTHR10612 21 174 5.2E-46 T 22-04-2016 APT61_RS21830 2102952642d6ec14fbd92b34c352b0c5 174 PIRSF PIRSF036893 2 174 2.1E-46 T 22-04-2016 IPR022271 Lipocalin, ApoD type APT61_RS21830 2102952642d6ec14fbd92b34c352b0c5 174 Pfam PF08212 Lipocalin-like domain 34 173 7.8E-48 T 22-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain APT61_RS21830 2102952642d6ec14fbd92b34c352b0c5 174 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 22-04-2016 IPR022272 Lipocalin family conserved site APT61_RS21830 2102952642d6ec14fbd92b34c352b0c5 174 Gene3D G3DSA:2.40.128.20 3 174 8.9E-56 T 22-04-2016 IPR012674 Calycin APT61_RS21830 2102952642d6ec14fbd92b34c352b0c5 174 SUPERFAMILY SSF50814 12 173 1.25E-46 T 22-04-2016 IPR011038 Calycin-like APT61_RS21830 2102952642d6ec14fbd92b34c352b0c5 174 PRINTS PR01171 Bacterial lipocalin signature 51 67 9.7E-43 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APT61_RS21830 2102952642d6ec14fbd92b34c352b0c5 174 PRINTS PR01171 Bacterial lipocalin signature 70 79 9.7E-43 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APT61_RS21830 2102952642d6ec14fbd92b34c352b0c5 174 PRINTS PR01171 Bacterial lipocalin signature 136 147 9.7E-43 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APT61_RS21830 2102952642d6ec14fbd92b34c352b0c5 174 PRINTS PR01171 Bacterial lipocalin signature 121 129 9.7E-43 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APT61_RS21830 2102952642d6ec14fbd92b34c352b0c5 174 PRINTS PR01171 Bacterial lipocalin signature 34 48 9.7E-43 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APT61_RS21830 2102952642d6ec14fbd92b34c352b0c5 174 PRINTS PR01171 Bacterial lipocalin signature 104 118 9.7E-43 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APT61_RS21830 2102952642d6ec14fbd92b34c352b0c5 174 PRINTS PR01171 Bacterial lipocalin signature 163 173 9.7E-43 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APT61_RS04145 85fe09692f4a815c71b3ef59719fd26e 957 Gene3D G3DSA:3.40.640.10 90 305 6.7E-14 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS04145 85fe09692f4a815c71b3ef59719fd26e 957 Gene3D G3DSA:3.40.640.10 504 778 4.2E-46 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS04145 85fe09692f4a815c71b3ef59719fd26e 957 SUPERFAMILY SSF53383 929 951 1.14E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS04145 85fe09692f4a815c71b3ef59719fd26e 957 SUPERFAMILY SSF53383 478 889 1.14E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS04145 85fe09692f4a815c71b3ef59719fd26e 957 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 956 25.564 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 APT61_RS04145 85fe09692f4a815c71b3ef59719fd26e 957 PANTHER PTHR11773:SF1 1 957 0.0 T 22-04-2016 APT61_RS04145 85fe09692f4a815c71b3ef59719fd26e 957 SUPERFAMILY SSF53383 17 440 1.02E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS04145 85fe09692f4a815c71b3ef59719fd26e 957 PANTHER PTHR11773 1 957 0.0 T 22-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 APT61_RS04145 85fe09692f4a815c71b3ef59719fd26e 957 Pfam PF02347 Glycine cleavage system P-protein 16 440 9.2E-190 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 APT61_RS04145 85fe09692f4a815c71b3ef59719fd26e 957 Pfam PF02347 Glycine cleavage system P-protein 483 739 2.5E-8 T 22-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 APT61_RS04145 85fe09692f4a815c71b3ef59719fd26e 957 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 950 0.0 T 22-04-2016 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 Gene3D G3DSA:3.40.1010.10 196 311 5.5E-46 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 Hamap MF_01646 Siroheme synthase [cysG]. 1 438 48.23 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 SUPERFAMILY SSF51735 2 94 2.94E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 Pfam PF10414 Sirohaem synthase dimerisation region 131 188 2.2E-18 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 SUPERFAMILY SSF75615 95 190 6.02E-28 T 22-04-2016 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 276 309 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 Gene3D G3DSA:3.40.50.720 45 93 1.5E-13 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 PIRSF PIRSF036426 41 444 6.9E-176 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 201 215 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 Pfam PF14824 Sirohaem biosynthesis protein central 100 126 2.2E-8 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 PANTHER PTHR21091:SF16 15 33 1.9E-73 T 22-04-2016 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 Gene3D G3DSA:3.40.50.720 2 44 3.8E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 43 188 3.8E-56 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 Gene3D G3DSA:3.30.160.110 94 129 8.2E-19 T 22-04-2016 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 SUPERFAMILY SSF53790 193 438 4.32E-82 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 PANTHER PTHR21091:SF16 164 408 1.9E-73 T 22-04-2016 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 Pfam PF13241 Putative NAD(P)-binding 6 96 1.0E-24 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 PANTHER PTHR21091 15 33 1.9E-73 T 22-04-2016 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 Gene3D G3DSA:1.10.8.210 131 191 3.6E-21 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 196 429 1.3E-90 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 Gene3D G3DSA:3.30.950.10 312 439 1.5E-48 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 198 408 1.3E-53 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APT61_RS04690 22c4ee982c6f3d41f20ec218929e0ad4 452 PANTHER PTHR21091 164 408 1.9E-73 T 22-04-2016 APT61_RS00055 8dcb07d00f0650e94c43922fc3a63351 139 PANTHER PTHR37831 2 139 4.7E-72 T 22-04-2016 APT61_RS00055 8dcb07d00f0650e94c43922fc3a63351 139 SUPERFAMILY SSF102546 1 139 2.75E-45 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 APT61_RS00055 8dcb07d00f0650e94c43922fc3a63351 139 PANTHER PTHR37831:SF1 2 139 4.7E-72 T 22-04-2016 APT61_RS00055 8dcb07d00f0650e94c43922fc3a63351 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 3.8E-49 T 22-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 APT61_RS00055 8dcb07d00f0650e94c43922fc3a63351 139 Gene3D G3DSA:3.40.1650.10 1 139 1.6E-44 T 22-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 APT61_RS00055 8dcb07d00f0650e94c43922fc3a63351 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.456 T 22-04-2016 IPR023064 D-ribose pyranase GO:0016872 UniPathway: UPA00916 APT61_RS16960 d4563cfc9690d2615b96ca243178de19 499 PANTHER PTHR30009:SF2 11 497 1.9E-180 T 22-04-2016 APT61_RS16960 d4563cfc9690d2615b96ca243178de19 499 Gene3D G3DSA:3.30.1360.60 421 498 6.6E-22 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS16960 d4563cfc9690d2615b96ca243178de19 499 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 399 483 6.6E-15 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS16960 d4563cfc9690d2615b96ca243178de19 499 SUPERFAMILY SSF55604 423 497 3.66E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS16960 d4563cfc9690d2615b96ca243178de19 499 Pfam PF02378 Phosphotransferase system, EIIC 19 336 8.7E-76 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS16960 d4563cfc9690d2615b96ca243178de19 499 PANTHER PTHR30009 11 497 1.9E-180 T 22-04-2016 APT61_RS16960 d4563cfc9690d2615b96ca243178de19 499 Pfam PF00367 phosphotransferase system, EIIB 426 458 2.4E-10 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS12680 9beae525714b72e8e0753e5ddd7cdfe1 216 Pfam PF00929 Exonuclease 20 194 2.1E-40 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APT61_RS12680 9beae525714b72e8e0753e5ddd7cdfe1 216 SMART SM00479 18 203 6.7E-38 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APT61_RS12680 9beae525714b72e8e0753e5ddd7cdfe1 216 PANTHER PTHR30231:SF2 1 214 1.5E-118 T 22-04-2016 APT61_RS12680 9beae525714b72e8e0753e5ddd7cdfe1 216 Hamap MF_00157 Ribonuclease T [rnt]. 1 216 119.73 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 APT61_RS12680 9beae525714b72e8e0753e5ddd7cdfe1 216 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 3.1E-110 T 22-04-2016 IPR005987 Ribonuclease T GO:0004540|GO:0006396 APT61_RS12680 9beae525714b72e8e0753e5ddd7cdfe1 216 Gene3D G3DSA:3.30.420.10 12 209 2.8E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS12680 9beae525714b72e8e0753e5ddd7cdfe1 216 PANTHER PTHR30231 1 214 1.5E-118 T 22-04-2016 APT61_RS12680 9beae525714b72e8e0753e5ddd7cdfe1 216 SUPERFAMILY SSF53098 13 207 2.01E-56 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 7.4E-279 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 Gene3D G3DSA:2.40.50.140 1 106 9.4E-41 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 Gene3D G3DSA:3.30.930.10 131 275 9.3E-112 T 22-04-2016 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 Gene3D G3DSA:3.30.930.10 415 585 9.3E-112 T 22-04-2016 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 SUPERFAMILY SSF55681 108 287 4.79E-106 T 22-04-2016 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 SUPERFAMILY SSF55681 420 584 4.79E-106 T 22-04-2016 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 Pfam PF02938 GAD domain 307 406 3.0E-31 T 22-04-2016 IPR029351 GAD domain APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 SUPERFAMILY SSF55261 288 419 2.83E-46 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 SUPERFAMILY SSF50249 1 105 5.14E-35 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 PANTHER PTHR22594:SF5 370 571 1.2E-255 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 PANTHER PTHR22594:SF5 1 296 1.2E-255 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 2.3E-17 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 PANTHER PTHR22594 370 571 1.2E-255 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 PANTHER PTHR22594 1 296 1.2E-255 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 1 563 37.15 T 22-04-2016 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 Gene3D G3DSA:3.30.1360.30 276 414 6.2E-47 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 558 3.1E-107 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS08550 ad8a243d591073ec3fa559d6a7b6227d 590 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.2E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS13370 2ec0c0b5eebd4580a0031df70e14c753 149 Gene3D G3DSA:2.40.50.140 2 149 7.2E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS13370 2ec0c0b5eebd4580a0031df70e14c753 149 PIRSF PIRSF002070 1 149 4.5E-26 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APT61_RS13370 2ec0c0b5eebd4580a0031df70e14c753 149 Pfam PF00436 Single-strand binding protein family 4 99 9.6E-15 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APT61_RS13370 2ec0c0b5eebd4580a0031df70e14c753 149 SUPERFAMILY SSF50249 1 149 3.29E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS18695 f9def5ebf6f800fcc41b0eefd6ce84d8 201 Pfam PF00694 Aconitase C-terminal domain 3 126 2.1E-38 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18695 f9def5ebf6f800fcc41b0eefd6ce84d8 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 4 189 7.1E-99 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18695 f9def5ebf6f800fcc41b0eefd6ce84d8 201 PANTHER PTHR11670 1 201 3.4E-118 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18695 f9def5ebf6f800fcc41b0eefd6ce84d8 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 2 200 44.663 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18695 f9def5ebf6f800fcc41b0eefd6ce84d8 201 SUPERFAMILY SSF52016 3 194 9.61E-61 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT61_RS18695 f9def5ebf6f800fcc41b0eefd6ce84d8 201 Gene3D G3DSA:3.20.19.10 3 196 1.0E-47 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT61_RS18695 f9def5ebf6f800fcc41b0eefd6ce84d8 201 PANTHER PTHR11670:SF27 1 201 3.4E-118 T 22-04-2016 APT61_RS06755 bbf78bb8c5ced2b301589ac7378f4bb5 297 Gene3D G3DSA:3.40.50.720 1 249 9.2E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06755 bbf78bb8c5ced2b301589ac7378f4bb5 297 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 2.4E-108 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 APT61_RS06755 bbf78bb8c5ced2b301589ac7378f4bb5 297 PANTHER PTHR11092:SF0 1 296 7.3E-149 T 22-04-2016 APT61_RS06755 bbf78bb8c5ced2b301589ac7378f4bb5 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 2.1E-24 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APT61_RS06755 bbf78bb8c5ced2b301589ac7378f4bb5 297 PANTHER PTHR11092 1 296 7.3E-149 T 22-04-2016 IPR010099 Epimerase family protein SDR39U1 APT61_RS06755 bbf78bb8c5ced2b301589ac7378f4bb5 297 SUPERFAMILY SSF51735 1 296 3.32E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06755 bbf78bb8c5ced2b301589ac7378f4bb5 297 Pfam PF08338 Domain of unknown function (DUF1731) 249 294 4.0E-17 T 22-04-2016 IPR013549 Domain of unknown function DUF1731 APT61_RS09860 2e6eb845b90561dc79de2f340a4b29e3 322 Gene3D G3DSA:3.90.1580.10 42 311 1.5E-43 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme APT61_RS09860 2e6eb845b90561dc79de2f340a4b29e3 322 PANTHER PTHR23150 47 250 1.4E-20 T 22-04-2016 APT61_RS09860 2e6eb845b90561dc79de2f340a4b29e3 322 SUPERFAMILY SSF56436 46 267 5.89E-43 T 22-04-2016 IPR016187 C-type lectin fold APT61_RS09860 2e6eb845b90561dc79de2f340a4b29e3 322 Pfam PF03781 Sulfatase-modifying factor enzyme 1 47 265 1.7E-33 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme APT61_RS09530 15db967eb6e7a8f9b5806309fc1328d6 291 SUPERFAMILY SSF55120 69 234 1.85E-42 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS09530 15db967eb6e7a8f9b5806309fc1328d6 291 Gene3D G3DSA:3.10.290.10 3 62 2.0E-14 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS09530 15db967eb6e7a8f9b5806309fc1328d6 291 Pfam PF00849 RNA pseudouridylate synthase 69 199 4.8E-16 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS09530 15db967eb6e7a8f9b5806309fc1328d6 291 Pfam PF01479 S4 domain 4 43 3.0E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS09530 15db967eb6e7a8f9b5806309fc1328d6 291 PANTHER PTHR21600:SF2 1 290 7.0E-104 T 22-04-2016 APT61_RS09530 15db967eb6e7a8f9b5806309fc1328d6 291 SUPERFAMILY SSF55174 5 98 2.5E-13 T 22-04-2016 APT61_RS09530 15db967eb6e7a8f9b5806309fc1328d6 291 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APT61_RS09530 15db967eb6e7a8f9b5806309fc1328d6 291 PANTHER PTHR21600 1 290 7.0E-104 T 22-04-2016 APT61_RS09530 15db967eb6e7a8f9b5806309fc1328d6 291 SMART SM00363 3 74 3.0E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS09530 15db967eb6e7a8f9b5806309fc1328d6 291 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 5.6E-63 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APT61_RS09560 e15c4a2f266ba071c4382ff06e146a2f 324 Gene3D G3DSA:3.40.190.10 92 184 3.2E-20 T 22-04-2016 APT61_RS09560 e15c4a2f266ba071c4382ff06e146a2f 324 Gene3D G3DSA:1.10.10.10 1 81 9.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS09560 e15c4a2f266ba071c4382ff06e146a2f 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 5.9E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS09560 e15c4a2f266ba071c4382ff06e146a2f 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS09560 e15c4a2f266ba071c4382ff06e146a2f 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS09560 e15c4a2f266ba071c4382ff06e146a2f 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS09560 e15c4a2f266ba071c4382ff06e146a2f 324 PANTHER PTHR30126 1 309 1.6E-224 T 22-04-2016 APT61_RS09560 e15c4a2f266ba071c4382ff06e146a2f 324 Pfam PF03466 LysR substrate binding domain 92 292 1.1E-42 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS09560 e15c4a2f266ba071c4382ff06e146a2f 324 SUPERFAMILY SSF46785 1 85 2.89E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS09560 e15c4a2f266ba071c4382ff06e146a2f 324 Gene3D G3DSA:3.40.190.10 185 261 2.1E-31 T 22-04-2016 APT61_RS09560 e15c4a2f266ba071c4382ff06e146a2f 324 PANTHER PTHR30126:SF6 1 309 1.6E-224 T 22-04-2016 APT61_RS09560 e15c4a2f266ba071c4382ff06e146a2f 324 SUPERFAMILY SSF53850 91 322 1.63E-45 T 22-04-2016 APT61_RS17620 7ab84b49d0eccb2ad0d7d34f0d6a12f5 406 PANTHER PTHR11384 71 404 5.7E-44 T 22-04-2016 APT61_RS17620 7ab84b49d0eccb2ad0d7d34f0d6a12f5 406 SUPERFAMILY SSF90123 299 389 3.01E-6 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS17620 7ab84b49d0eccb2ad0d7d34f0d6a12f5 406 SUPERFAMILY SSF90123 78 251 1.47E-5 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS17620 7ab84b49d0eccb2ad0d7d34f0d6a12f5 406 Pfam PF05992 SbmA/BacA-like family 80 393 1.2E-164 T 22-04-2016 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 APT61_RS17620 7ab84b49d0eccb2ad0d7d34f0d6a12f5 406 PANTHER PTHR11384:SF3 71 404 5.7E-44 T 22-04-2016 APT61_RS07950 4e6692bc28693436f8ad9639e6506bdf 316 PANTHER PTHR30126:SF6 1 309 2.4E-167 T 22-04-2016 APT61_RS07950 4e6692bc28693436f8ad9639e6506bdf 316 Gene3D G3DSA:3.40.190.10 180 260 2.3E-22 T 22-04-2016 APT61_RS07950 4e6692bc28693436f8ad9639e6506bdf 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS07950 4e6692bc28693436f8ad9639e6506bdf 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS07950 4e6692bc28693436f8ad9639e6506bdf 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.6E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS07950 4e6692bc28693436f8ad9639e6506bdf 316 SUPERFAMILY SSF53850 88 294 4.71E-41 T 22-04-2016 APT61_RS07950 4e6692bc28693436f8ad9639e6506bdf 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 1.7E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS07950 4e6692bc28693436f8ad9639e6506bdf 316 SUPERFAMILY SSF46785 14 112 5.22E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS07950 4e6692bc28693436f8ad9639e6506bdf 316 Pfam PF03466 LysR substrate binding domain 90 293 2.2E-41 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS07950 4e6692bc28693436f8ad9639e6506bdf 316 PANTHER PTHR30126 1 309 2.4E-167 T 22-04-2016 APT61_RS07950 4e6692bc28693436f8ad9639e6506bdf 316 Gene3D G3DSA:3.40.190.10 92 179 6.0E-19 T 22-04-2016 APT61_RS07950 4e6692bc28693436f8ad9639e6506bdf 316 Gene3D G3DSA:1.10.10.10 2 81 9.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS16445 31596f40ad41fe3b096e3b042086b04e 317 PANTHER PTHR30118:SF10 20 317 9.5E-185 T 22-04-2016 APT61_RS16445 31596f40ad41fe3b096e3b042086b04e 317 SUPERFAMILY SSF53850 116 316 5.07E-20 T 22-04-2016 APT61_RS16445 31596f40ad41fe3b096e3b042086b04e 317 PANTHER PTHR30118 20 317 9.5E-185 T 22-04-2016 APT61_RS16445 31596f40ad41fe3b096e3b042086b04e 317 Gene3D G3DSA:3.40.190.10 115 203 4.6E-13 T 22-04-2016 APT61_RS16445 31596f40ad41fe3b096e3b042086b04e 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 31 89 5.4E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS16445 31596f40ad41fe3b096e3b042086b04e 317 Gene3D G3DSA:3.40.190.10 204 280 6.2E-8 T 22-04-2016 APT61_RS16445 31596f40ad41fe3b096e3b042086b04e 317 Pfam PF03466 LysR substrate binding domain 116 316 9.3E-17 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS16445 31596f40ad41fe3b096e3b042086b04e 317 SUPERFAMILY SSF46785 26 106 1.16E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS16445 31596f40ad41fe3b096e3b042086b04e 317 Gene3D G3DSA:1.10.10.10 25 106 2.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18730 222ee9cf9b1e5863cb0bab0bebe00d98 196 Gene3D G3DSA:1.10.357.10 55 131 5.1E-8 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS18730 222ee9cf9b1e5863cb0bab0bebe00d98 196 Gene3D G3DSA:1.10.10.60 3 54 1.4E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS18730 222ee9cf9b1e5863cb0bab0bebe00d98 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 59 1.1E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS18730 222ee9cf9b1e5863cb0bab0bebe00d98 196 PANTHER PTHR30055:SF10 1 132 8.9E-21 T 22-04-2016 APT61_RS18730 222ee9cf9b1e5863cb0bab0bebe00d98 196 SUPERFAMILY SSF46689 3 80 3.75E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS18730 222ee9cf9b1e5863cb0bab0bebe00d98 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS18730 222ee9cf9b1e5863cb0bab0bebe00d98 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.0E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS18730 222ee9cf9b1e5863cb0bab0bebe00d98 196 PANTHER PTHR30055 1 132 8.9E-21 T 22-04-2016 APT61_RS16890 6c4318ed45bf5fca3ee8af2a0a209f68 326 Gene3D G3DSA:3.40.50.2300 60 165 7.3E-27 T 22-04-2016 APT61_RS16890 6c4318ed45bf5fca3ee8af2a0a209f68 326 SMART SM00354 1 70 3.1E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS16890 6c4318ed45bf5fca3ee8af2a0a209f68 326 Pfam PF13377 Periplasmic binding protein-like domain 166 326 3.6E-37 T 22-04-2016 APT61_RS16890 6c4318ed45bf5fca3ee8af2a0a209f68 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 4.5E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS16890 6c4318ed45bf5fca3ee8af2a0a209f68 326 PANTHER PTHR30146 1 326 7.3E-101 T 22-04-2016 APT61_RS16890 6c4318ed45bf5fca3ee8af2a0a209f68 326 Gene3D G3DSA:1.10.260.40 1 59 1.5E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS16890 6c4318ed45bf5fca3ee8af2a0a209f68 326 SUPERFAMILY SSF47413 2 58 6.43E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS16890 6c4318ed45bf5fca3ee8af2a0a209f68 326 Gene3D G3DSA:3.40.50.2300 166 325 5.4E-55 T 22-04-2016 APT61_RS16890 6c4318ed45bf5fca3ee8af2a0a209f68 326 SUPERFAMILY SSF53822 60 325 1.18E-68 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS06060 313f6330b325e1731eb311b940b2e6a1 339 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 83 168 3.1E-28 T 22-04-2016 IPR013856 Peptidase M4 domain GO:0004222 APT61_RS06060 313f6330b325e1731eb311b940b2e6a1 339 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 171 338 3.2E-48 T 22-04-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 APT61_RS06060 313f6330b325e1731eb311b940b2e6a1 339 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 123 143 4.1E-29 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 APT61_RS06060 313f6330b325e1731eb311b940b2e6a1 339 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 180 191 4.1E-29 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 APT61_RS06060 313f6330b325e1731eb311b940b2e6a1 339 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 261 277 4.1E-29 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 APT61_RS06060 313f6330b325e1731eb311b940b2e6a1 339 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 159 175 4.1E-29 T 22-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 APT61_RS06060 313f6330b325e1731eb311b940b2e6a1 339 Gene3D G3DSA:1.10.390.10 173 338 3.1E-50 T 22-04-2016 APT61_RS06060 313f6330b325e1731eb311b940b2e6a1 339 Pfam PF16485 Protealysin propeptide 5 45 6.3E-21 T 22-04-2016 IPR032475 Protealysin, N-terminal propeptide APT61_RS06060 313f6330b325e1731eb311b940b2e6a1 339 SUPERFAMILY SSF55486 59 338 9.23E-81 T 22-04-2016 APT61_RS06060 313f6330b325e1731eb311b940b2e6a1 339 Gene3D G3DSA:3.10.170.10 50 172 2.3E-43 T 22-04-2016 IPR013856 Peptidase M4 domain GO:0004222 APT61_RS06060 313f6330b325e1731eb311b940b2e6a1 339 PANTHER PTHR33794 57 338 4.8E-113 T 22-04-2016 APT61_RS12065 a5b1937b76996c8ae401bb566c75d165 120 PANTHER PTHR30561 1 111 9.1E-69 T 22-04-2016 APT61_RS12065 a5b1937b76996c8ae401bb566c75d165 120 PANTHER PTHR30561:SF2 1 111 9.1E-69 T 22-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 APT61_RS12065 a5b1937b76996c8ae401bb566c75d165 120 SUPERFAMILY SSF103481 6 106 9.02E-15 T 22-04-2016 APT61_RS12065 a5b1937b76996c8ae401bb566c75d165 120 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 1 120 29.861 T 22-04-2016 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 APT61_RS12065 a5b1937b76996c8ae401bb566c75d165 120 Pfam PF00893 Small Multidrug Resistance protein 3 93 1.1E-24 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 APT61_RS12475 32807137720647ed98e92bf0464e0595 127 Gene3D G3DSA:1.10.260.40 16 69 1.1E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS12475 32807137720647ed98e92bf0464e0595 127 SUPERFAMILY SSF47413 17 68 2.78E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS12475 32807137720647ed98e92bf0464e0595 127 SMART SM00530 9 66 0.0086 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS12475 32807137720647ed98e92bf0464e0595 127 Pfam PF01381 Helix-turn-helix 20 66 1.0E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS06915 a63a2f7697acb85626b84fa99abd40b8 431 Pfam PF00425 chorismate binding enzyme 170 420 1.8E-62 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APT61_RS06915 a63a2f7697acb85626b84fa99abd40b8 431 PANTHER PTHR11236:SF3 34 428 1.8E-122 T 22-04-2016 APT61_RS06915 a63a2f7697acb85626b84fa99abd40b8 431 Gene3D G3DSA:3.60.120.10 38 428 3.3E-78 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APT61_RS06915 a63a2f7697acb85626b84fa99abd40b8 431 SUPERFAMILY SSF56322 26 428 4.19E-101 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APT61_RS06915 a63a2f7697acb85626b84fa99abd40b8 431 PANTHER PTHR11236 34 428 1.8E-122 T 22-04-2016 APT61_RS06915 a63a2f7697acb85626b84fa99abd40b8 431 Hamap MF_01935 Isochorismate synthase MenF [menF]. 7 430 40.707 T 22-04-2016 APT61_RS06915 a63a2f7697acb85626b84fa99abd40b8 431 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 93 427 1.8E-103 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 APT61_RS08290 39900726ce697de97f900e56c1e256d2 429 PANTHER PTHR30482:SF9 70 428 1.9E-174 T 22-04-2016 APT61_RS08290 39900726ce697de97f900e56c1e256d2 429 Pfam PF02653 Branched-chain amino acid transport system / permease component 122 406 1.5E-48 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS08290 39900726ce697de97f900e56c1e256d2 429 Pfam PF11862 Domain of unknown function (DUF3382) 16 113 1.5E-17 T 22-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal APT61_RS08290 39900726ce697de97f900e56c1e256d2 429 PANTHER PTHR30482 70 428 1.9E-174 T 22-04-2016 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 296 9.4E-25 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 Gene3D G3DSA:3.40.190.10 111 199 1.6E-39 T 22-04-2016 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 6.8E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 6.8E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 6.8E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 6.8E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 6.8E-49 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.702 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 1.1E-114 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 PANTHER PTHR11557 5 307 8.9E-166 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 PIRSF PIRSF001438 1 310 2.6E-123 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 SUPERFAMILY SSF54782 220 308 4.05E-29 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 Gene3D G3DSA:3.40.190.10 3 110 9.9E-48 T 22-04-2016 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 212 2.3E-78 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 SUPERFAMILY SSF53850 5 219 6.27E-84 T 22-04-2016 APT61_RS00950 e9c7b6c255e9ea132ecaaffc0bee2fdd 313 Gene3D G3DSA:3.30.160.40 221 305 8.4E-31 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS02365 00c6c5d4f217de789ca3a955dfbfb0f6 81 Pfam PF06196 Protein of unknown function (DUF997) 7 77 7.7E-31 T 22-04-2016 IPR010398 Protein of unknown function DUF997 APT61_RS02365 00c6c5d4f217de789ca3a955dfbfb0f6 81 PANTHER PTHR39174 1 81 7.0E-36 T 22-04-2016 APT61_RS02365 00c6c5d4f217de789ca3a955dfbfb0f6 81 PANTHER PTHR39174:SF1 1 81 7.0E-36 T 22-04-2016 APT61_RS02365 00c6c5d4f217de789ca3a955dfbfb0f6 81 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 80 2.0E-29 T 22-04-2016 IPR010398 Protein of unknown function DUF997 APT61_RS11775 1c5daaef2b925206512332982506fcab 210 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 12 209 4.5E-100 T 22-04-2016 IPR017791 Urea carboxylase-associated protein 1 APT61_RS11775 1c5daaef2b925206512332982506fcab 210 PANTHER PTHR31527 1 210 1.9E-59 T 22-04-2016 APT61_RS11775 1c5daaef2b925206512332982506fcab 210 Pfam PF09347 Domain of unknown function (DUF1989) 17 183 1.2E-65 T 22-04-2016 IPR018959 Domain of unknown function DUF1989 APT61_RS11775 1c5daaef2b925206512332982506fcab 210 PANTHER PTHR31527:SF0 1 210 1.9E-59 T 22-04-2016 APT61_RS01180 7f7f68125178bc81b6aeaa21e391fa3b 342 Gene3D G3DSA:3.90.78.10 230 341 5.8E-47 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS01180 7f7f68125178bc81b6aeaa21e391fa3b 342 SUPERFAMILY SSF56194 202 340 5.23E-52 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS01180 7f7f68125178bc81b6aeaa21e391fa3b 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 206 329 1.4E-34 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS01180 7f7f68125178bc81b6aeaa21e391fa3b 342 Gene3D G3DSA:3.30.43.10 3 68 2.2E-26 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APT61_RS01180 7f7f68125178bc81b6aeaa21e391fa3b 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 89.393 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS01180 7f7f68125178bc81b6aeaa21e391fa3b 342 SUPERFAMILY SSF56176 3 197 2.04E-48 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APT61_RS01180 7f7f68125178bc81b6aeaa21e391fa3b 342 PANTHER PTHR21071 1 337 2.8E-191 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS01180 7f7f68125178bc81b6aeaa21e391fa3b 342 Gene3D G3DSA:3.30.465.10 72 229 9.4E-55 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APT61_RS01180 7f7f68125178bc81b6aeaa21e391fa3b 342 PANTHER PTHR21071:SF6 1 337 2.8E-191 T 22-04-2016 APT61_RS01180 7f7f68125178bc81b6aeaa21e391fa3b 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 5 330 3.6E-115 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS01180 7f7f68125178bc81b6aeaa21e391fa3b 342 Pfam PF01565 FAD binding domain 18 149 1.4E-24 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APT61_RS00155 b0599311d9d4b51730ab8472dcb699e8 208 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 27.587 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APT61_RS00155 b0599311d9d4b51730ab8472dcb699e8 208 Gene3D G3DSA:3.40.50.300 6 198 2.3E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00155 b0599311d9d4b51730ab8472dcb699e8 208 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 193 4.3E-73 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 APT61_RS00155 b0599311d9d4b51730ab8472dcb699e8 208 Pfam PF01926 50S ribosome-binding GTPase 28 146 7.7E-19 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS00155 b0599311d9d4b51730ab8472dcb699e8 208 SUPERFAMILY SSF52540 17 198 6.46E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00155 b0599311d9d4b51730ab8472dcb699e8 208 PANTHER PTHR11649 2 199 2.3E-56 T 22-04-2016 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 256 266 - T 22-04-2016 IPR019793 Peroxidases heam-ligand binding site APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 PANTHER PTHR30555:SF0 1 722 0.0 T 22-04-2016 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 PRINTS PR00458 Haem peroxidase superfamily signature 315 330 7.5E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 PRINTS PR00458 Haem peroxidase superfamily signature 172 184 7.5E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 PRINTS PR00458 Haem peroxidase superfamily signature 94 108 7.5E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 PRINTS PR00458 Haem peroxidase superfamily signature 256 271 7.5E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 PRINTS PR00458 Haem peroxidase superfamily signature 154 171 7.5E-19 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 71 96 3.1E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 476 502 3.1E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 30 52 3.1E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 264 287 3.1E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 56 69 3.1E-48 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 Gene3D G3DSA:1.10.420.10 307 404 1.5E-43 T 22-04-2016 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 Gene3D G3DSA:1.10.420.10 249 271 1.5E-43 T 22-04-2016 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 SUPERFAMILY SSF48113 26 426 1.43E-135 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 Pfam PF00141 Peroxidase 400 697 9.0E-33 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 Pfam PF00141 Peroxidase 88 393 7.6E-47 T 22-04-2016 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 Hamap MF_01961 Catalase-peroxidase [katG]. 8 723 38.701 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 ProSitePatterns PS00436 Peroxidases active site signature. 94 105 - T 22-04-2016 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 PANTHER PTHR30555 1 722 0.0 T 22-04-2016 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 15 723 0.0 T 22-04-2016 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 Gene3D G3DSA:1.10.420.10 576 697 1.9E-42 T 22-04-2016 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 Gene3D G3DSA:1.10.520.10 701 722 7.3E-52 T 22-04-2016 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 Gene3D G3DSA:1.10.520.10 429 575 7.3E-52 T 22-04-2016 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 Gene3D G3DSA:1.10.520.10 51 248 1.0E-68 T 22-04-2016 APT61_RS00615 30e4204c52c4360f784bd356fcde0be3 723 SUPERFAMILY SSF48113 432 722 5.16E-102 T 22-04-2016 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 APT61_RS02425 eebff70b2b69058227ba10b328aac8d6 489 PANTHER PTHR30001 1 489 4.9E-228 T 22-04-2016 APT61_RS02425 eebff70b2b69058227ba10b328aac8d6 489 SUPERFAMILY SSF50249 39 128 2.62E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS02425 eebff70b2b69058227ba10b328aac8d6 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 2.1E-176 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 APT61_RS02425 eebff70b2b69058227ba10b328aac8d6 489 Pfam PF00575 S1 RNA binding domain 38 109 1.4E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 APT61_RS02425 eebff70b2b69058227ba10b328aac8d6 489 Pfam PF10150 Ribonuclease E/G family 124 393 2.1E-101 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 APT61_RS02425 eebff70b2b69058227ba10b328aac8d6 489 SMART SM00316 37 122 1.2E-9 T 22-04-2016 IPR022967 RNA-binding domain, S1 APT61_RS02425 eebff70b2b69058227ba10b328aac8d6 489 Gene3D G3DSA:2.40.50.140 30 128 1.1E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS01835 b043832369c5be14f88444cb7e9cc1ed 334 SUPERFAMILY SSF52374 5 330 2.21E-97 T 22-04-2016 APT61_RS01835 b043832369c5be14f88444cb7e9cc1ed 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 1.9E-87 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS01835 b043832369c5be14f88444cb7e9cc1ed 334 PANTHER PTHR10055 2 334 1.2E-189 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APT61_RS01835 b043832369c5be14f88444cb7e9cc1ed 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 6.2E-117 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APT61_RS01835 b043832369c5be14f88444cb7e9cc1ed 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 2.108965E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APT61_RS01835 b043832369c5be14f88444cb7e9cc1ed 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 2.108965E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APT61_RS01835 b043832369c5be14f88444cb7e9cc1ed 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 2.108965E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APT61_RS01835 b043832369c5be14f88444cb7e9cc1ed 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 2.108965E-29 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 APT61_RS01835 b043832369c5be14f88444cb7e9cc1ed 334 Gene3D G3DSA:1.10.240.10 206 324 1.9E-20 T 22-04-2016 APT61_RS01835 b043832369c5be14f88444cb7e9cc1ed 334 PANTHER PTHR10055:SF10 2 334 1.2E-189 T 22-04-2016 APT61_RS01835 b043832369c5be14f88444cb7e9cc1ed 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS01835 b043832369c5be14f88444cb7e9cc1ed 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.509 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 APT61_RS01835 b043832369c5be14f88444cb7e9cc1ed 334 Gene3D G3DSA:3.40.50.620 4 205 5.6E-89 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 SMART SM00387 505 623 6.8E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 SMART SM00448 643 754 2.4E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 SMART SM00388 402 464 1.3E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 620 2.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 580 2.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 583 601 2.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 566 2.0E-16 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 SMART SM00304 315 368 1.1E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 Gene3D G3DSA:3.30.565.10 460 622 5.3E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 SUPERFAMILY SSF158472 321 363 2.48E-8 T 22-04-2016 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 Pfam PF00672 HAMP domain 297 362 8.7E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 PANTHER PTHR24423 13 27 4.8E-136 T 22-04-2016 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 PANTHER PTHR24423 386 758 4.8E-136 T 22-04-2016 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 SUPERFAMILY SSF52172 643 759 1.31E-22 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 506 622 1.3E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 PANTHER PTHR24423:SF544 13 27 4.8E-136 T 22-04-2016 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 PANTHER PTHR24423:SF544 386 758 4.8E-136 T 22-04-2016 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 Gene3D G3DSA:3.40.50.2300 643 759 1.8E-27 T 22-04-2016 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 SUPERFAMILY SSF55874 455 625 3.67E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 Pfam PF00072 Response regulator receiver domain 645 754 8.5E-14 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS20720 60524c04aacd4a81f43d36206488613d 760 SUPERFAMILY SSF47384 397 462 2.55E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS15940 e8b3c8fcaacb9e31ef9d40b060908ab6 348 PANTHER PTHR11943 3 348 8.9E-219 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15940 e8b3c8fcaacb9e31ef9d40b060908ab6 348 SUPERFAMILY SSF54197 179 345 1.33E-58 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 APT61_RS15940 e8b3c8fcaacb9e31ef9d40b060908ab6 348 SUPERFAMILY SSF54197 3 177 4.93E-75 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 APT61_RS15940 e8b3c8fcaacb9e31ef9d40b060908ab6 348 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 3 176 6.1E-72 T 22-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15940 e8b3c8fcaacb9e31ef9d40b060908ab6 348 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 22-04-2016 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15940 e8b3c8fcaacb9e31ef9d40b060908ab6 348 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 347 1.8E-210 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15940 e8b3c8fcaacb9e31ef9d40b060908ab6 348 PANTHER PTHR11943:SF2 3 348 8.9E-219 T 22-04-2016 APT61_RS15940 e8b3c8fcaacb9e31ef9d40b060908ab6 348 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 345 5.4E-72 T 22-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15940 e8b3c8fcaacb9e31ef9d40b060908ab6 348 Gene3D G3DSA:3.30.428.10 44 175 3.9E-59 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 APT61_RS15940 e8b3c8fcaacb9e31ef9d40b060908ab6 348 Gene3D G3DSA:3.30.428.10 176 345 3.3E-79 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 APT61_RS15940 e8b3c8fcaacb9e31ef9d40b060908ab6 348 PIRSF PIRSF000808 1 341 1.9E-129 T 22-04-2016 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0006012|GO:0008108|GO:0008270 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 Gene3D G3DSA:3.40.50.300 2 192 2.1E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 PANTHER PTHR23115:SF175 401 595 8.7E-278 T 22-04-2016 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 PANTHER PTHR23115:SF175 2 373 8.7E-278 T 22-04-2016 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 SUPERFAMILY SSF54980 399 493 3.88E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 Gene3D G3DSA:2.40.30.10 193 289 1.7E-24 T 22-04-2016 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 Pfam PF00679 Elongation factor G C-terminus 399 482 1.5E-19 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 307.225 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.9E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 SUPERFAMILY SSF52540 2 235 7.79E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 1.7E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 SUPERFAMILY SSF54980 292 370 1.73E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 PANTHER PTHR23115 401 595 8.7E-278 T 22-04-2016 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 PANTHER PTHR23115 2 373 8.7E-278 T 22-04-2016 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 Gene3D G3DSA:3.30.70.870 291 369 5.7E-26 T 22-04-2016 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 3.9E-52 T 22-04-2016 APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 3.7E-49 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 Gene3D G3DSA:3.30.70.240 401 489 3.2E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APT61_RS05785 186f520598fe600c46fdd50a5cf93d50 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 9.4E-302 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 APT61_RS02545 119e46254652f92fb5c544fafc8d5b82 1448 Gene3D G3DSA:3.20.20.70 400 744 4.0E-101 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS02545 119e46254652f92fb5c544fafc8d5b82 1448 Pfam PF04898 Glutamate synthase central domain 419 699 4.7E-106 T 22-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 APT61_RS02545 119e46254652f92fb5c544fafc8d5b82 1448 Pfam PF01645 Conserved region in glutamate synthase 755 1118 2.5E-157 T 22-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 APT61_RS02545 119e46254652f92fb5c544fafc8d5b82 1448 Gene3D G3DSA:2.160.20.60 1173 1427 9.4E-96 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APT61_RS02545 119e46254652f92fb5c544fafc8d5b82 1448 PANTHER PTHR11938 1 1438 0.0 T 22-04-2016 APT61_RS02545 119e46254652f92fb5c544fafc8d5b82 1448 Gene3D G3DSA:3.60.20.10 1 395 1.6E-158 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS02545 119e46254652f92fb5c544fafc8d5b82 1448 SUPERFAMILY SSF51395 396 1153 5.95E-252 T 22-04-2016 APT61_RS02545 119e46254652f92fb5c544fafc8d5b82 1448 SUPERFAMILY SSF56235 1 391 2.47E-138 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS02545 119e46254652f92fb5c544fafc8d5b82 1448 Gene3D G3DSA:3.20.20.70 772 1163 1.4E-164 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS02545 119e46254652f92fb5c544fafc8d5b82 1448 Pfam PF01493 GXGXG motif 1198 1381 2.8E-74 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APT61_RS02545 119e46254652f92fb5c544fafc8d5b82 1448 SUPERFAMILY SSF69336 1173 1427 6.67E-88 T 22-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 APT61_RS02545 119e46254652f92fb5c544fafc8d5b82 1448 PANTHER PTHR11938:SF1 1 1438 0.0 T 22-04-2016 APT61_RS02545 119e46254652f92fb5c544fafc8d5b82 1448 Pfam PF00310 Glutamine amidotransferases class-II 1 387 7.0E-164 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain APT61_RS22210 745eaeca3da4912baad8305668b09900 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 6.7E-73 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22210 745eaeca3da4912baad8305668b09900 513 SUPERFAMILY SSF47917 383 511 8.11E-45 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22210 745eaeca3da4912baad8305668b09900 513 Gene3D G3DSA:3.40.50.300 94 382 3.3E-113 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS22210 745eaeca3da4912baad8305668b09900 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.89 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22210 745eaeca3da4912baad8305668b09900 513 PANTHER PTHR15184:SF3 1 496 1.9E-288 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22210 745eaeca3da4912baad8305668b09900 513 PANTHER PTHR15184 1 496 1.9E-288 T 22-04-2016 APT61_RS22210 745eaeca3da4912baad8305668b09900 513 SUPERFAMILY SSF52540 96 381 4.81E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS22210 745eaeca3da4912baad8305668b09900 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 1.3E-259 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22210 745eaeca3da4912baad8305668b09900 513 Gene3D G3DSA:2.40.30.20 1 93 4.0E-29 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22210 745eaeca3da4912baad8305668b09900 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22210 745eaeca3da4912baad8305668b09900 513 Gene3D G3DSA:1.20.150.20 383 510 1.5E-47 T 22-04-2016 APT61_RS22210 745eaeca3da4912baad8305668b09900 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 4.7E-44 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22210 745eaeca3da4912baad8305668b09900 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 1.6E-12 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS22210 745eaeca3da4912baad8305668b09900 513 SUPERFAMILY SSF50615 10 94 3.73E-25 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS01210 66f252ce4fddb7dce078b6f4ba86e593 256 Gene3D G3DSA:3.20.20.450 33 252 1.9E-26 T 22-04-2016 IPR001633 EAL domain APT61_RS01210 66f252ce4fddb7dce078b6f4ba86e593 256 Pfam PF00563 EAL domain 28 243 2.6E-28 T 22-04-2016 IPR001633 EAL domain APT61_RS01210 66f252ce4fddb7dce078b6f4ba86e593 256 PANTHER PTHR33121:SF6 1 256 1.6E-117 T 22-04-2016 APT61_RS01210 66f252ce4fddb7dce078b6f4ba86e593 256 SMART SM00052 5 248 1.6E-33 T 22-04-2016 IPR001633 EAL domain APT61_RS01210 66f252ce4fddb7dce078b6f4ba86e593 256 SUPERFAMILY SSF141868 27 252 1.7E-31 T 22-04-2016 IPR001633 EAL domain APT61_RS01210 66f252ce4fddb7dce078b6f4ba86e593 256 PANTHER PTHR33121 1 256 1.6E-117 T 22-04-2016 APT61_RS07245 4522d91718a032ff8c1fe7cbb582adf5 222 PANTHER PTHR11109 1 222 2.3E-103 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APT61_RS07245 4522d91718a032ff8c1fe7cbb582adf5 222 Pfam PF01227 GTP cyclohydrolase I 41 218 8.2E-63 T 22-04-2016 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APT61_RS07245 4522d91718a032ff8c1fe7cbb582adf5 222 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 40 220 4.9E-86 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APT61_RS07245 4522d91718a032ff8c1fe7cbb582adf5 222 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 98 114 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APT61_RS07245 4522d91718a032ff8c1fe7cbb582adf5 222 Gene3D G3DSA:3.30.1130.10 92 220 3.7E-51 T 22-04-2016 APT61_RS07245 4522d91718a032ff8c1fe7cbb582adf5 222 Gene3D G3DSA:1.10.286.10 4 86 1.2E-31 T 22-04-2016 APT61_RS07245 4522d91718a032ff8c1fe7cbb582adf5 222 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 146 156 - T 22-04-2016 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APT61_RS07245 4522d91718a032ff8c1fe7cbb582adf5 222 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 36 219 33.899 T 22-04-2016 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 APT61_RS07245 4522d91718a032ff8c1fe7cbb582adf5 222 SUPERFAMILY SSF55620 5 221 6.52E-77 T 22-04-2016 APT61_RS06310 bdaa168b27f6e3fb7b9dd280baa59a17 277 PANTHER PTHR30406 7 277 2.5E-210 T 22-04-2016 APT61_RS06310 bdaa168b27f6e3fb7b9dd280baa59a17 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 2.7E-114 T 22-04-2016 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 APT61_RS06310 bdaa168b27f6e3fb7b9dd280baa59a17 277 Gene3D G3DSA:1.10.3720.10 19 273 5.4E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS06310 bdaa168b27f6e3fb7b9dd280baa59a17 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 3.8E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS06310 bdaa168b27f6e3fb7b9dd280baa59a17 277 SUPERFAMILY SSF161098 16 264 8.69E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS06310 bdaa168b27f6e3fb7b9dd280baa59a17 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 269 2.5E-115 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 APT61_RS06310 bdaa168b27f6e3fb7b9dd280baa59a17 277 PANTHER PTHR30406:SF7 7 277 2.5E-210 T 22-04-2016 APT61_RS19765 3ce135fc465ce811d5e768b715ce3f2d 482 Gene3D G3DSA:3.40.309.10 269 453 2.9E-70 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS19765 3ce135fc465ce811d5e768b715ce3f2d 482 Gene3D G3DSA:3.40.605.10 10 268 1.1E-108 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS19765 3ce135fc465ce811d5e768b715ce3f2d 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 1.9E-241 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 APT61_RS19765 3ce135fc465ce811d5e768b715ce3f2d 482 PANTHER PTHR11699:SF49 1 480 0.0 T 22-04-2016 APT61_RS19765 3ce135fc465ce811d5e768b715ce3f2d 482 SUPERFAMILY SSF53720 6 481 7.72E-178 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS19765 3ce135fc465ce811d5e768b715ce3f2d 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APT61_RS19765 3ce135fc465ce811d5e768b715ce3f2d 482 Pfam PF00171 Aldehyde dehydrogenase family 19 477 3.9E-176 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS19765 3ce135fc465ce811d5e768b715ce3f2d 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APT61_RS19765 3ce135fc465ce811d5e768b715ce3f2d 482 PANTHER PTHR11699 1 480 0.0 T 22-04-2016 APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 PANTHER PTHR24321:SF6 11 253 4.1E-49 T 22-04-2016 APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 PANTHER PTHR24321 11 253 4.1E-49 T 22-04-2016 APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 252 1.7E-59 T 22-04-2016 APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 Gene3D G3DSA:3.40.50.720 9 253 2.5E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 4.7E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 4.7E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 4.7E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 3.8E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 3.8E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 3.8E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 3.8E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 3.8E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 3.8E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 SUPERFAMILY SSF51735 13 253 5.1E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS12805 eb4ba6390e175f7d0005e00fbee88bb7 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 181 0.0057 T 22-04-2016 APT61_RS15390 5725196bcad4ba1245465ea650c34235 306 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 84 100 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APT61_RS15390 5725196bcad4ba1245465ea650c34235 306 SUPERFAMILY SSF48576 13 268 1.09E-63 T 22-04-2016 IPR008949 Isoprenoid synthase domain APT61_RS15390 5725196bcad4ba1245465ea650c34235 306 PANTHER PTHR12001:SF23 9 253 5.2E-64 T 22-04-2016 APT61_RS15390 5725196bcad4ba1245465ea650c34235 306 PANTHER PTHR12001 9 253 5.2E-64 T 22-04-2016 IPR017446 Polyprenyl synthetase-related APT61_RS15390 5725196bcad4ba1245465ea650c34235 306 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APT61_RS15390 5725196bcad4ba1245465ea650c34235 306 Gene3D G3DSA:1.10.600.10 7 265 6.2E-68 T 22-04-2016 IPR008949 Isoprenoid synthase domain APT61_RS15390 5725196bcad4ba1245465ea650c34235 306 Pfam PF00348 Polyprenyl synthetase 35 252 7.8E-43 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 SMART SM01185 69 125 9.1E-13 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 SUPERFAMILY SSF50249 67 130 8.57E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 Gene3D G3DSA:2.40.50.140 67 131 4.1E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 3.4E-16 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 SUPERFAMILY SSF50104 1 65 2.89E-11 T 22-04-2016 IPR008991 Translation protein SH3-like domain APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 4.1E-19 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 45.304 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 Gene3D G3DSA:2.40.50.140 132 189 8.4E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 PANTHER PTHR30053:SF5 1 190 4.7E-128 T 22-04-2016 APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 3.3E-99 T 22-04-2016 IPR011897 Translation elongation factor P-like, YeiP APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 PIRSF PIRSF005901 1 190 2.4E-59 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 PANTHER PTHR30053 1 190 4.7E-128 T 22-04-2016 APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 SUPERFAMILY SSF50249 132 189 1.1E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 SMART SM00841 133 188 9.0E-27 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 8.5E-13 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 APT61_RS07175 f6637da06baa2a370a58092f55ad38ce 190 Gene3D G3DSA:2.30.30.30 1 65 2.4E-15 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 APT61_RS17795 977f29fc236f7448961591726d558c29 439 Gene3D G3DSA:3.50.50.60 23 126 9.9E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS17795 977f29fc236f7448961591726d558c29 439 Gene3D G3DSA:3.50.50.60 179 257 9.9E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS17795 977f29fc236f7448961591726d558c29 439 Gene3D G3DSA:3.50.50.60 356 404 9.9E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS17795 977f29fc236f7448961591726d558c29 439 SUPERFAMILY SSF51905 36 258 5.83E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS17795 977f29fc236f7448961591726d558c29 439 SUPERFAMILY SSF51905 366 416 5.83E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS17795 977f29fc236f7448961591726d558c29 439 Pfam PF01266 FAD dependent oxidoreductase 37 393 7.1E-40 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APT61_RS17795 977f29fc236f7448961591726d558c29 439 PANTHER PTHR13847 2 432 1.4E-101 T 22-04-2016 APT61_RS17795 977f29fc236f7448961591726d558c29 439 PANTHER PTHR13847:SF196 2 432 1.4E-101 T 22-04-2016 APT61_RS21065 2f44647ea5750ff6917bfc396971cd21 585 PIRSF PIRSF000719 1 575 8.2E-289 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 APT61_RS21065 2f44647ea5750ff6917bfc396971cd21 585 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 7.5E-244 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 APT61_RS21065 2f44647ea5750ff6917bfc396971cd21 585 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 9 573 0.0 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 APT61_RS21065 2f44647ea5750ff6917bfc396971cd21 585 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 43.185 T 22-04-2016 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 APT61_RS21065 2f44647ea5750ff6917bfc396971cd21 585 PANTHER PTHR39559 1 576 3.5E-241 T 22-04-2016 APT61_RS19555 96d6729ef085e52081431199e4ac2764 155 SMART SM00347 29 130 5.8E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS19555 96d6729ef085e52081431199e4ac2764 155 SUPERFAMILY SSF46785 11 147 3.67E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19555 96d6729ef085e52081431199e4ac2764 155 Gene3D G3DSA:1.10.10.10 9 145 2.1E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19555 96d6729ef085e52081431199e4ac2764 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 2.6E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS19555 96d6729ef085e52081431199e4ac2764 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 2.6E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS19555 96d6729ef085e52081431199e4ac2764 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 2.6E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS19555 96d6729ef085e52081431199e4ac2764 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 2.6E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS19555 96d6729ef085e52081431199e4ac2764 155 PANTHER PTHR33164 12 154 5.3E-23 T 22-04-2016 APT61_RS19555 96d6729ef085e52081431199e4ac2764 155 Pfam PF01047 MarR family 36 94 3.7E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS19555 96d6729ef085e52081431199e4ac2764 155 PANTHER PTHR33164:SF16 12 154 5.3E-23 T 22-04-2016 APT61_RS08845 afce1f6d4e0d3a57c4608ef90373c7e1 636 SMART SM00491 474 603 1.2E-54 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APT61_RS08845 afce1f6d4e0d3a57c4608ef90373c7e1 636 SUPERFAMILY SSF52540 13 232 1.08E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08845 afce1f6d4e0d3a57c4608ef90373c7e1 636 SUPERFAMILY SSF52540 573 596 2.57E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08845 afce1f6d4e0d3a57c4608ef90373c7e1 636 SUPERFAMILY SSF52540 41 88 2.57E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08845 afce1f6d4e0d3a57c4608ef90373c7e1 636 SUPERFAMILY SSF52540 477 542 2.57E-10 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08845 afce1f6d4e0d3a57c4608ef90373c7e1 636 Gene3D G3DSA:3.40.50.300 449 596 4.6E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08845 afce1f6d4e0d3a57c4608ef90373c7e1 636 SMART SM00487 16 286 0.0015 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS08845 afce1f6d4e0d3a57c4608ef90373c7e1 636 Pfam PF13307 Helicase C-terminal domain 459 616 4.2E-34 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APT61_RS08845 afce1f6d4e0d3a57c4608ef90373c7e1 636 Pfam PF06733 DEAD_2 181 247 2.2E-4 T 22-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 APT61_RS08845 afce1f6d4e0d3a57c4608ef90373c7e1 636 PANTHER PTHR11472:SF37 13 621 8.1E-241 T 22-04-2016 APT61_RS08845 afce1f6d4e0d3a57c4608ef90373c7e1 636 Pfam PF00270 DEAD/DEAH box helicase 32 90 2.3E-4 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APT61_RS08845 afce1f6d4e0d3a57c4608ef90373c7e1 636 Gene3D G3DSA:3.40.50.300 4 116 7.4E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08845 afce1f6d4e0d3a57c4608ef90373c7e1 636 Gene3D G3DSA:3.40.50.300 190 233 7.4E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08845 afce1f6d4e0d3a57c4608ef90373c7e1 636 PANTHER PTHR11472 13 621 8.1E-241 T 22-04-2016 APT61_RS00645 efe3ad09a0ed92b2ccf4b832f5348251 765 Pfam PF02901 Pyruvate formate lyase-like 1 626 9.3E-200 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 APT61_RS00645 efe3ad09a0ed92b2ccf4b832f5348251 765 PANTHER PTHR30191:SF4 1 765 0.0 T 22-04-2016 APT61_RS00645 efe3ad09a0ed92b2ccf4b832f5348251 765 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 1 765 0.0 T 22-04-2016 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APT61_RS00645 efe3ad09a0ed92b2ccf4b832f5348251 765 Gene3D G3DSA:3.20.70.20 1 764 1.7E-252 T 22-04-2016 APT61_RS00645 efe3ad09a0ed92b2ccf4b832f5348251 765 SUPERFAMILY SSF51998 1 764 1.22E-215 T 22-04-2016 APT61_RS00645 efe3ad09a0ed92b2ccf4b832f5348251 765 Pfam PF01228 Glycine radical 646 747 2.1E-25 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APT61_RS00645 efe3ad09a0ed92b2ccf4b832f5348251 765 ProSitePatterns PS00850 Glycine radical domain signature. 736 744 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APT61_RS00645 efe3ad09a0ed92b2ccf4b832f5348251 765 PANTHER PTHR30191 1 765 0.0 T 22-04-2016 APT61_RS20640 f30362baaf1939bb3a408a520f42bac4 143 PANTHER PTHR33990 1 142 4.0E-45 T 22-04-2016 APT61_RS20640 f30362baaf1939bb3a408a520f42bac4 143 SUPERFAMILY SSF54593 1 140 4.77E-28 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS20640 f30362baaf1939bb3a408a520f42bac4 143 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 137 8.7E-6 T 22-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase APT61_RS20640 f30362baaf1939bb3a408a520f42bac4 143 Gene3D G3DSA:3.10.180.10 8 140 6.4E-40 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS20640 f30362baaf1939bb3a408a520f42bac4 143 PANTHER PTHR33990:SF1 1 142 4.0E-45 T 22-04-2016 APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 PIRSF PIRSF000114 1 336 1.8E-100 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 Gene3D G3DSA:1.10.1040.10 184 330 1.0E-56 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 SUPERFAMILY SSF51735 8 182 3.83E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 Gene3D G3DSA:3.40.50.720 9 182 2.5E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 SUPERFAMILY SSF48179 184 335 3.29E-56 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 1.2E-51 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 5.6E-51 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 PANTHER PTHR11728 8 338 2.0E-145 T 22-04-2016 APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.487 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 5.2E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 5.2E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 5.2E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 5.2E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 5.2E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APT61_RS21555 784ce1acda1c404b1e4910f81d4130fd 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 5.2E-42 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 APT61_RS11085 9177d3ac62098c64af6a5add9d62e5af 295 SUPERFAMILY SSF103481 189 290 5.62E-9 T 22-04-2016 APT61_RS11085 9177d3ac62098c64af6a5add9d62e5af 295 PANTHER PTHR12715:SF7 3 291 1.5E-134 T 22-04-2016 APT61_RS11085 9177d3ac62098c64af6a5add9d62e5af 295 Pfam PF00892 EamA-like transporter family 160 285 4.4E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS11085 9177d3ac62098c64af6a5add9d62e5af 295 Pfam PF00892 EamA-like transporter family 6 137 1.2E-6 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS11085 9177d3ac62098c64af6a5add9d62e5af 295 PANTHER PTHR12715 3 291 1.5E-134 T 22-04-2016 APT61_RS11085 9177d3ac62098c64af6a5add9d62e5af 295 SUPERFAMILY SSF103481 47 140 2.48E-5 T 22-04-2016 APT61_RS00075 e973973fb5834e106da8c03e21a7ddf5 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 8 302 1.2E-109 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 APT61_RS00075 e973973fb5834e106da8c03e21a7ddf5 309 Pfam PF00294 pfkB family carbohydrate kinase 6 297 1.1E-76 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APT61_RS00075 e973973fb5834e106da8c03e21a7ddf5 309 Gene3D G3DSA:3.40.1190.20 6 307 3.0E-99 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS00075 e973973fb5834e106da8c03e21a7ddf5 309 PANTHER PTHR10584 1 309 3.2E-107 T 22-04-2016 APT61_RS00075 e973973fb5834e106da8c03e21a7ddf5 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APT61_RS00075 e973973fb5834e106da8c03e21a7ddf5 309 SUPERFAMILY SSF53613 6 307 2.96E-85 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS00075 e973973fb5834e106da8c03e21a7ddf5 309 PRINTS PR00990 Ribokinase signature 176 191 1.5E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APT61_RS00075 e973973fb5834e106da8c03e21a7ddf5 309 PRINTS PR00990 Ribokinase signature 9 30 1.5E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APT61_RS00075 e973973fb5834e106da8c03e21a7ddf5 309 PRINTS PR00990 Ribokinase signature 36 55 1.5E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APT61_RS00075 e973973fb5834e106da8c03e21a7ddf5 309 PRINTS PR00990 Ribokinase signature 108 121 1.5E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APT61_RS00075 e973973fb5834e106da8c03e21a7ddf5 309 PRINTS PR00990 Ribokinase signature 220 231 1.5E-38 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APT61_RS00075 e973973fb5834e106da8c03e21a7ddf5 309 PANTHER PTHR10584:SF166 1 309 3.2E-107 T 22-04-2016 APT61_RS03700 dab24b513b10897b957a4f2e9e034afa 724 Pfam PF11842 Domain of unknown function (DUF3362) 594 711 8.4E-44 T 22-04-2016 IPR024560 Uncharacterised protein family UPF0313, C-terminal APT61_RS03700 dab24b513b10897b957a4f2e9e034afa 724 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 380 400 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APT61_RS03700 dab24b513b10897b957a4f2e9e034afa 724 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 28 693 49.614 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 APT61_RS03700 dab24b513b10897b957a4f2e9e034afa 724 Pfam PF04055 Radical SAM superfamily 380 585 8.4E-20 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS03700 dab24b513b10897b957a4f2e9e034afa 724 PANTHER PTHR32331:SF3 8 723 0.0 T 22-04-2016 APT61_RS03700 dab24b513b10897b957a4f2e9e034afa 724 Gene3D G3DSA:3.80.30.20 374 642 1.4E-46 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APT61_RS03700 dab24b513b10897b957a4f2e9e034afa 724 Pfam PF08497 Radical SAM N-terminal 29 379 2.1E-146 T 22-04-2016 IPR013704 Uncharacterised protein family UPF0313, N-terminal APT61_RS03700 dab24b513b10897b957a4f2e9e034afa 724 SMART SM00729 376 626 8.7E-5 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APT61_RS03700 dab24b513b10897b957a4f2e9e034afa 724 SUPERFAMILY SSF102114 363 440 2.88E-10 T 22-04-2016 APT61_RS03700 dab24b513b10897b957a4f2e9e034afa 724 SUPERFAMILY SSF102114 470 623 2.88E-10 T 22-04-2016 APT61_RS03700 dab24b513b10897b957a4f2e9e034afa 724 PANTHER PTHR32331 8 723 0.0 T 22-04-2016 APT61_RS03700 dab24b513b10897b957a4f2e9e034afa 724 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 29 644 6.6E-266 T 22-04-2016 IPR022946 Uncharacterised protein family UPF0313 APT61_RS08870 16eef8d830016eb1043cd706c66ebce2 89 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.902 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APT61_RS08870 16eef8d830016eb1043cd706c66ebce2 89 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 1.4E-36 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APT61_RS08870 16eef8d830016eb1043cd706c66ebce2 89 Gene3D G3DSA:3.30.1070.10 31 86 4.1E-26 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APT61_RS08870 16eef8d830016eb1043cd706c66ebce2 89 SUPERFAMILY SSF55229 32 85 1.29E-18 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APT61_RS08870 16eef8d830016eb1043cd706c66ebce2 89 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 4.2E-25 T 22-04-2016 IPR005527 Septum formation topological specificity factor MinE GO:0032955|GO:0051301 APT61_RS08870 16eef8d830016eb1043cd706c66ebce2 89 PANTHER PTHR33404 1 83 3.4E-36 T 22-04-2016 APT61_RS02620 303bac410455fc1118faa07f30e4cf3c 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site APT61_RS02620 303bac410455fc1118faa07f30e4cf3c 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 2.1E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS02620 303bac410455fc1118faa07f30e4cf3c 90 SUPERFAMILY SSF55594 4 90 3.01E-23 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS02620 303bac410455fc1118faa07f30e4cf3c 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 2.0E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS02620 303bac410455fc1118faa07f30e4cf3c 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 2.0E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS02620 303bac410455fc1118faa07f30e4cf3c 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 2.0E-8 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS02620 303bac410455fc1118faa07f30e4cf3c 90 PANTHER PTHR33705 1 90 1.9E-38 T 22-04-2016 APT61_RS02620 303bac410455fc1118faa07f30e4cf3c 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APT61_RS02620 303bac410455fc1118faa07f30e4cf3c 90 Gene3D G3DSA:3.30.1340.10 3 89 1.9E-25 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS02620 303bac410455fc1118faa07f30e4cf3c 90 PANTHER PTHR33705:SF2 1 90 1.9E-38 T 22-04-2016 APT61_RS02620 303bac410455fc1118faa07f30e4cf3c 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 1.1E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 PANTHER PTHR30295 1 154 1.2E-53 T 22-04-2016 APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 Gene3D G3DSA:1.20.1260.10 1 155 9.6E-66 T 22-04-2016 IPR012347 Ferritin-related APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 PIRSF PIRSF002560 1 157 7.0E-71 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 Pfam PF00210 Ferritin-like domain 9 143 3.3E-39 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 PANTHER PTHR30295:SF9 1 154 1.2E-53 T 22-04-2016 APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 4.9E-81 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 SUPERFAMILY SSF47240 1 155 6.1E-54 T 22-04-2016 IPR009078 Ferritin-like superfamily APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 PRINTS PR00601 Bacterioferritin signature 23 43 4.9E-77 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 PRINTS PR00601 Bacterioferritin signature 65 85 4.9E-77 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 PRINTS PR00601 Bacterioferritin signature 44 64 4.9E-77 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 PRINTS PR00601 Bacterioferritin signature 107 127 4.9E-77 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 PRINTS PR00601 Bacterioferritin signature 3 22 4.9E-77 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 PRINTS PR00601 Bacterioferritin signature 128 149 4.9E-77 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 PRINTS PR00601 Bacterioferritin signature 86 106 4.9E-77 T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APT61_RS02045 5b13c659c5be3f68d16b70a411764485 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 22-04-2016 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 APT61_RS20290 06d10424494255554cf635e73cf1811a 641 Pfam PF17201 Cache 3/Cache 2 fusion domain 36 317 1.0E-71 T 22-04-2016 IPR033462 Cache 3/Cache 2 fusion domain APT61_RS20290 06d10424494255554cf635e73cf1811a 641 SMART SM00304 340 392 3.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS20290 06d10424494255554cf635e73cf1811a 641 Gene3D G3DSA:1.10.287.950 409 609 6.6E-56 T 22-04-2016 APT61_RS20290 06d10424494255554cf635e73cf1811a 641 Pfam PF00672 HAMP domain 321 382 8.6E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS20290 06d10424494255554cf635e73cf1811a 641 PANTHER PTHR32089 131 641 3.3E-117 T 22-04-2016 APT61_RS20290 06d10424494255554cf635e73cf1811a 641 SMART SM00283 393 640 5.9E-81 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS20290 06d10424494255554cf635e73cf1811a 641 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 459 639 1.1E-50 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS20290 06d10424494255554cf635e73cf1811a 641 SUPERFAMILY SSF103190 100 214 1.06E-12 T 22-04-2016 IPR029151 Periplasmic sensor domain-like APT61_RS20290 06d10424494255554cf635e73cf1811a 641 SUPERFAMILY SSF58104 360 641 5.49E-67 T 22-04-2016 APT61_RS20290 06d10424494255554cf635e73cf1811a 641 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 568 597 1.3E-42 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20290 06d10424494255554cf635e73cf1811a 641 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 414 443 1.3E-42 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20290 06d10424494255554cf635e73cf1811a 641 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 518 1.3E-42 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20290 06d10424494255554cf635e73cf1811a 641 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 520 549 1.3E-42 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20290 06d10424494255554cf635e73cf1811a 641 Gene3D G3DSA:3.30.450.20 186 316 1.8E-12 T 22-04-2016 APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 Gene3D G3DSA:3.40.50.300 440 455 3.0E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 Gene3D G3DSA:3.40.50.300 642 666 3.0E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 Pfam PF13086 AAA domain 421 958 1.9E-8 T 22-04-2016 APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 PANTHER PTHR10887 985 1191 3.4E-107 T 22-04-2016 APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 PANTHER PTHR10887 489 542 3.4E-107 T 22-04-2016 APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 PANTHER PTHR10887 782 957 3.4E-107 T 22-04-2016 APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 PANTHER PTHR10887 362 458 3.4E-107 T 22-04-2016 APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 SUPERFAMILY SSF52540 409 451 4.07E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 SUPERFAMILY SSF52540 897 955 4.07E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 SUPERFAMILY SSF52540 1008 1189 4.07E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 SUPERFAMILY SSF52540 647 680 4.07E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 SUPERFAMILY SSF52540 492 517 4.07E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 Pfam PF13087 AAA domain 1065 1188 1.7E-11 T 22-04-2016 APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 Gene3D G3DSA:3.40.50.300 489 552 3.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 Gene3D G3DSA:3.40.50.300 918 960 3.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 Gene3D G3DSA:3.40.50.300 994 1038 3.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 Gene3D G3DSA:3.40.50.300 392 439 3.2E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 PANTHER PTHR10887:SF350 985 1191 3.4E-107 T 22-04-2016 APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 PANTHER PTHR10887:SF350 489 542 3.4E-107 T 22-04-2016 APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 PANTHER PTHR10887:SF350 782 957 3.4E-107 T 22-04-2016 APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 PANTHER PTHR10887:SF350 362 458 3.4E-107 T 22-04-2016 APT61_RS05520 74b6377d9cc2f44a80404999a6b59dad 1209 Gene3D G3DSA:3.40.50.300 1071 1187 1.5E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17375 8950401c1f2fee564d83d9a2c37f0f50 163 Gene3D G3DSA:3.30.70.990 9 97 4.5E-36 T 22-04-2016 APT61_RS17375 8950401c1f2fee564d83d9a2c37f0f50 163 SUPERFAMILY SSF89963 91 163 6.54E-29 T 22-04-2016 IPR007551 Protein of unknown function DUF520 APT61_RS17375 8950401c1f2fee564d83d9a2c37f0f50 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.09 T 22-04-2016 IPR007551 Protein of unknown function DUF520 APT61_RS17375 8950401c1f2fee564d83d9a2c37f0f50 163 PANTHER PTHR30476:SF0 1 163 1.4E-93 T 22-04-2016 APT61_RS17375 8950401c1f2fee564d83d9a2c37f0f50 163 SUPERFAMILY SSF89963 2 89 3.14E-30 T 22-04-2016 IPR007551 Protein of unknown function DUF520 APT61_RS17375 8950401c1f2fee564d83d9a2c37f0f50 163 Gene3D G3DSA:3.30.70.860 98 163 3.6E-35 T 22-04-2016 APT61_RS17375 8950401c1f2fee564d83d9a2c37f0f50 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 4.1E-65 T 22-04-2016 IPR007551 Protein of unknown function DUF520 APT61_RS17375 8950401c1f2fee564d83d9a2c37f0f50 163 PANTHER PTHR30476 1 163 1.4E-93 T 22-04-2016 APT61_RS11090 78521d92a8fbd4f30d6df39d732019a8 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APT61_RS11090 78521d92a8fbd4f30d6df39d732019a8 195 SMART SM00926 43 104 1.3E-21 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS11090 78521d92a8fbd4f30d6df39d732019a8 195 PANTHER PTHR11615 30 195 8.8E-104 T 22-04-2016 APT61_RS11090 78521d92a8fbd4f30d6df39d732019a8 195 Gene3D G3DSA:3.40.50.740 109 191 3.1E-17 T 22-04-2016 APT61_RS11090 78521d92a8fbd4f30d6df39d732019a8 195 Gene3D G3DSA:2.20.25.90 37 108 6.2E-24 T 22-04-2016 APT61_RS11090 78521d92a8fbd4f30d6df39d732019a8 195 Pfam PF00384 Molybdopterin oxidoreductase 107 165 1.4E-6 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS11090 78521d92a8fbd4f30d6df39d732019a8 195 SUPERFAMILY SSF53706 36 195 8.11E-56 T 22-04-2016 APT61_RS11090 78521d92a8fbd4f30d6df39d732019a8 195 PANTHER PTHR11615:SF149 30 195 8.8E-104 T 22-04-2016 APT61_RS11090 78521d92a8fbd4f30d6df39d732019a8 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 104 2.3E-19 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS02555 b2b46ea9ed9a71bd85f842a84e885726 330 Gene3D G3DSA:3.80.30.20 36 251 3.4E-32 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APT61_RS02555 b2b46ea9ed9a71bd85f842a84e885726 330 PANTHER PTHR11135:SF1 14 305 4.3E-148 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 APT61_RS02555 b2b46ea9ed9a71bd85f842a84e885726 330 Pfam PF16199 Radical_SAM C-terminal domain 222 297 4.3E-18 T 22-04-2016 IPR032432 Radical SAM, C-terminal extension APT61_RS02555 b2b46ea9ed9a71bd85f842a84e885726 330 Pfam PF04055 Radical SAM superfamily 57 215 9.3E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS02555 b2b46ea9ed9a71bd85f842a84e885726 330 PANTHER PTHR11135 14 305 4.3E-148 T 22-04-2016 APT61_RS02555 b2b46ea9ed9a71bd85f842a84e885726 330 SUPERFAMILY SSF102114 27 269 6.54E-45 T 22-04-2016 APT61_RS02555 b2b46ea9ed9a71bd85f842a84e885726 330 SMART SM00729 37 261 2.2E-39 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APT61_RS02555 b2b46ea9ed9a71bd85f842a84e885726 330 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 20 315 6.9E-138 T 22-04-2016 IPR005911 Protein YhcC-like GO:0051536 APT61_RS15050 31552388ae2bc68bbd1b4365e3e3d017 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.7E-21 T 22-04-2016 APT61_RS15050 31552388ae2bc68bbd1b4365e3e3d017 164 Gene3D G3DSA:1.10.10.10 13 64 1.0E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15050 31552388ae2bc68bbd1b4365e3e3d017 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 22-04-2016 IPR019885 Transcription regulator HTH, AsnC-type, conserved site APT61_RS15050 31552388ae2bc68bbd1b4365e3e3d017 164 Gene3D G3DSA:3.30.70.920 65 161 2.0E-33 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT61_RS15050 31552388ae2bc68bbd1b4365e3e3d017 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 6.0E-25 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT61_RS15050 31552388ae2bc68bbd1b4365e3e3d017 164 SUPERFAMILY SSF46785 12 70 4.01E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15050 31552388ae2bc68bbd1b4365e3e3d017 164 PANTHER PTHR30154:SF0 4 162 1.4E-107 T 22-04-2016 APT61_RS15050 31552388ae2bc68bbd1b4365e3e3d017 164 SMART SM00344 12 121 2.1E-55 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APT61_RS15050 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS15050 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS15050 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS15050 31552388ae2bc68bbd1b4365e3e3d017 164 SUPERFAMILY SSF54909 74 157 2.68E-22 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS15050 31552388ae2bc68bbd1b4365e3e3d017 164 PANTHER PTHR30154 4 162 1.4E-107 T 22-04-2016 APT61_RS20355 12fe028d35c8f43ea8c7ef9664e40a02 444 PANTHER PTHR30404:SF1 1 444 4.6E-242 T 22-04-2016 APT61_RS20355 12fe028d35c8f43ea8c7ef9664e40a02 444 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 193 412 4.5E-48 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APT61_RS20355 12fe028d35c8f43ea8c7ef9664e40a02 444 Gene3D G3DSA:3.40.630.40 191 288 2.2E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APT61_RS20355 12fe028d35c8f43ea8c7ef9664e40a02 444 Gene3D G3DSA:3.40.630.40 340 416 2.2E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APT61_RS20355 12fe028d35c8f43ea8c7ef9664e40a02 444 SUPERFAMILY SSF53187 339 416 1.22E-52 T 22-04-2016 APT61_RS20355 12fe028d35c8f43ea8c7ef9664e40a02 444 SUPERFAMILY SSF53187 191 287 1.22E-52 T 22-04-2016 APT61_RS20355 12fe028d35c8f43ea8c7ef9664e40a02 444 SMART SM00646 253 412 3.2E-75 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APT61_RS20355 12fe028d35c8f43ea8c7ef9664e40a02 444 PANTHER PTHR30404 1 444 4.6E-242 T 22-04-2016 APT61_RS21015 9c94c6327459937d5b7ac5618f3a510e 262 Gene3D G3DSA:3.30.460.10 9 81 9.6E-4 T 22-04-2016 APT61_RS21015 9c94c6327459937d5b7ac5618f3a510e 262 Pfam PF10127 Predicted nucleotidyltransferase 10 256 1.8E-95 T 22-04-2016 IPR018775 Nucleotidyltransferase, predicted APT61_RS21015 9c94c6327459937d5b7ac5618f3a510e 262 PANTHER PTHR34817 1 259 1.6E-80 T 22-04-2016 APT61_RS21015 9c94c6327459937d5b7ac5618f3a510e 262 SUPERFAMILY SSF81301 10 75 3.6E-5 T 22-04-2016 APT61_RS21015 9c94c6327459937d5b7ac5618f3a510e 262 PANTHER PTHR34817:SF2 1 259 1.6E-80 T 22-04-2016 APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 Gene3D G3DSA:3.40.50.10070 22 154 7.2E-51 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 SUPERFAMILY SSF69304 157 428 1.83E-54 T 22-04-2016 APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 PANTHER PTHR11731 160 428 3.2E-134 T 22-04-2016 APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 PANTHER PTHR11731 1 121 3.2E-134 T 22-04-2016 APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 427 8.2E-156 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 SUPERFAMILY SSF52964 28 161 5.49E-39 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 PANTHER PTHR11731:SF123 160 428 3.2E-134 T 22-04-2016 APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 PANTHER PTHR11731:SF123 1 121 3.2E-134 T 22-04-2016 APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 Hamap MF_00671 Protein TolB [tolB]. 5 426 34.397 T 22-04-2016 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 Gene3D G3DSA:2.130.10.10 155 428 3.3E-72 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 Pfam PF04052 TolB amino-terminal domain 23 121 3.8E-32 T 22-04-2016 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.8E-9 T 22-04-2016 IPR011659 WD40-like Beta Propeller APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 4.2E-5 T 22-04-2016 IPR011659 WD40-like Beta Propeller APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 Pfam PF07676 WD40-like Beta Propeller Repeat 369 396 0.003 T 22-04-2016 IPR011659 WD40-like Beta Propeller APT61_RS16030 3844f517cbfb830d167302052c7de39a 430 Pfam PF07676 WD40-like Beta Propeller Repeat 281 315 4.3E-10 T 22-04-2016 IPR011659 WD40-like Beta Propeller APT61_RS17770 d2d3924a0f8b4bdfe397a43755f89e75 310 PANTHER PTHR21091 11 306 9.3E-101 T 22-04-2016 APT61_RS17770 d2d3924a0f8b4bdfe397a43755f89e75 310 PANTHER PTHR21091:SF123 11 306 9.3E-101 T 22-04-2016 APT61_RS17770 d2d3924a0f8b4bdfe397a43755f89e75 310 Gene3D G3DSA:3.20.20.330 2 307 1.0E-96 T 22-04-2016 IPR003726 Homocysteine-binding domain APT61_RS17770 d2d3924a0f8b4bdfe397a43755f89e75 310 SUPERFAMILY SSF82282 6 308 3.14E-85 T 22-04-2016 IPR003726 Homocysteine-binding domain APT61_RS17770 d2d3924a0f8b4bdfe397a43755f89e75 310 Pfam PF02574 Homocysteine S-methyltransferase 17 307 3.6E-76 T 22-04-2016 IPR003726 Homocysteine-binding domain APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 Pfam PF10135 Rod binding protein 50 97 9.2E-18 T 22-04-2016 IPR019301 Flagellar protein FlgJ, N-terminal APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 SMART SM00047 146 310 3.5E-62 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PRINTS PR01002 Flagellar protein FlgJ signature 6 26 1.5E-166 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PRINTS PR01002 Flagellar protein FlgJ signature 261 280 1.5E-166 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PRINTS PR01002 Flagellar protein FlgJ signature 299 316 1.5E-166 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PRINTS PR01002 Flagellar protein FlgJ signature 28 51 1.5E-166 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PRINTS PR01002 Flagellar protein FlgJ signature 195 216 1.5E-166 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PRINTS PR01002 Flagellar protein FlgJ signature 239 260 1.5E-166 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PRINTS PR01002 Flagellar protein FlgJ signature 151 174 1.5E-166 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PRINTS PR01002 Flagellar protein FlgJ signature 53 73 1.5E-166 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PRINTS PR01002 Flagellar protein FlgJ signature 114 139 1.5E-166 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PRINTS PR01002 Flagellar protein FlgJ signature 74 96 1.5E-166 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PRINTS PR01002 Flagellar protein FlgJ signature 281 299 1.5E-166 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PRINTS PR01002 Flagellar protein FlgJ signature 217 238 1.5E-166 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PRINTS PR01002 Flagellar protein FlgJ signature 175 193 1.5E-166 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PANTHER PTHR33308 16 316 3.8E-45 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 299 1.3E-123 T 22-04-2016 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 KEGG: 00130+3.2.1.-|KEGG: 00531+3.2.1.- APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 PANTHER PTHR33308:SF3 16 316 3.8E-45 T 22-04-2016 APT61_RS14050 fba761db325688c74f7b4ae18f47853c 317 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 166 299 2.8E-19 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APT61_RS16640 3a59b358a8d32e2ad507e5f27d092658 411 PANTHER PTHR23513:SF9 1 408 5.1E-124 T 22-04-2016 APT61_RS16640 3a59b358a8d32e2ad507e5f27d092658 411 Pfam PF07690 Major Facilitator Superfamily 22 238 4.3E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS16640 3a59b358a8d32e2ad507e5f27d092658 411 Gene3D G3DSA:1.20.1250.20 239 402 2.4E-9 T 22-04-2016 APT61_RS16640 3a59b358a8d32e2ad507e5f27d092658 411 Gene3D G3DSA:1.20.1250.20 16 207 6.0E-22 T 22-04-2016 APT61_RS16640 3a59b358a8d32e2ad507e5f27d092658 411 PANTHER PTHR23513 1 408 5.1E-124 T 22-04-2016 APT61_RS16640 3a59b358a8d32e2ad507e5f27d092658 411 SUPERFAMILY SSF103473 16 402 7.98E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 PANTHER PTHR30352:SF13 7 60 4.0E-109 T 22-04-2016 APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 PANTHER PTHR30352:SF13 93 280 4.0E-109 T 22-04-2016 APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 ProSitePatterns PS01087 Radical activating enzymes signature. 19 40 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 5 276 1.2E-109 T 22-04-2016 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 SUPERFAMILY SSF102114 85 273 1.43E-11 T 22-04-2016 APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 Gene3D G3DSA:3.30.70.20 46 94 2.0E-13 T 22-04-2016 APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 Pfam PF13353 4Fe-4S single cluster domain 17 141 1.2E-9 T 22-04-2016 APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 PANTHER PTHR30352 7 60 4.0E-109 T 22-04-2016 APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 PANTHER PTHR30352 93 280 4.0E-109 T 22-04-2016 APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 Gene3D G3DSA:3.80.30.10 113 280 1.1E-36 T 22-04-2016 APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 PIRSF PIRSF000371 1 285 4.6E-81 T 22-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 Pfam PF04055 Radical SAM superfamily 27 217 2.8E-16 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS19165 c3d4ff1a8eef19a34f2982c31a17e755 286 SUPERFAMILY SSF54862 45 127 1.26E-14 T 22-04-2016 APT61_RS17095 f08eb46502333724c3888cab5b4fe898 558 Pfam PF02254 TrkA-N domain 421 534 4.5E-24 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APT61_RS17095 f08eb46502333724c3888cab5b4fe898 558 Gene3D G3DSA:3.40.50.720 414 549 3.0E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS17095 f08eb46502333724c3888cab5b4fe898 558 PANTHER PTHR16254:SF17 1 551 0.0 T 22-04-2016 APT61_RS17095 f08eb46502333724c3888cab5b4fe898 558 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 3.4E-76 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 APT61_RS17095 f08eb46502333724c3888cab5b4fe898 558 PANTHER PTHR16254 1 551 0.0 T 22-04-2016 APT61_RS17095 f08eb46502333724c3888cab5b4fe898 558 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 6.1E-79 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APT61_RS17095 f08eb46502333724c3888cab5b4fe898 558 SUPERFAMILY SSF51735 418 549 4.34E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 Gene3D G3DSA:1.10.287.130 223 288 2.8E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 PANTHER PTHR24423 174 438 6.7E-57 T 22-04-2016 APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 PANTHER PTHR24423 1 12 6.7E-57 T 22-04-2016 APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 SMART SM00304 180 232 6.2E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 SUPERFAMILY SSF47384 227 289 9.22E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 7.5E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 1.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.0E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 SMART SM00387 332 440 7.9E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 SUPERFAMILY SSF55874 292 440 4.85E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 Gene3D G3DSA:3.30.565.10 292 439 1.0E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 3.0E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 SMART SM00388 233 293 7.0E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS01740 c9d62b21dbe3e5c967d8992c58640b12 448 Pfam PF00672 HAMP domain 162 226 3.2E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS12455 eb8c4e33d4f1896a20d9ec30bb11b583 250 SUPERFAMILY SSF52540 70 234 3.19E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12455 eb8c4e33d4f1896a20d9ec30bb11b583 250 Pfam PF01695 IstB-like ATP binding protein 105 223 6.0E-18 T 22-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 APT61_RS12455 eb8c4e33d4f1896a20d9ec30bb11b583 250 PANTHER PTHR30050:SF7 1 250 1.5E-92 T 22-04-2016 APT61_RS12455 eb8c4e33d4f1896a20d9ec30bb11b583 250 PIRSF PIRSF003073 3 250 1.3E-37 T 22-04-2016 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein APT61_RS12455 eb8c4e33d4f1896a20d9ec30bb11b583 250 PANTHER PTHR30050 1 250 1.5E-92 T 22-04-2016 APT61_RS12455 eb8c4e33d4f1896a20d9ec30bb11b583 250 Gene3D G3DSA:3.40.50.300 54 225 1.2E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01660 346edcb44b42571396d71c01d411d5ac 276 Pfam PF01694 Rhomboid family 132 267 4.2E-28 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APT61_RS01660 346edcb44b42571396d71c01d411d5ac 276 PANTHER PTHR22936:SF30 1 275 4.0E-93 T 22-04-2016 APT61_RS01660 346edcb44b42571396d71c01d411d5ac 276 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 82 7.4E-28 T 22-04-2016 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 APT61_RS01660 346edcb44b42571396d71c01d411d5ac 276 SUPERFAMILY SSF144091 92 267 2.22E-43 T 22-04-2016 APT61_RS01660 346edcb44b42571396d71c01d411d5ac 276 Gene3D G3DSA:1.20.1540.10 94 267 3.5E-37 T 22-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 APT61_RS01660 346edcb44b42571396d71c01d411d5ac 276 PANTHER PTHR22936 1 275 4.0E-93 T 22-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 APT61_RS01660 346edcb44b42571396d71c01d411d5ac 276 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 269 1.4E-112 T 22-04-2016 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 APT61_RS06615 b57fcbf4e90d2e949c221fe3f6edd8d7 161 PANTHER PTHR23029 1 77 7.5E-27 T 22-04-2016 APT61_RS06615 b57fcbf4e90d2e949c221fe3f6edd8d7 161 PANTHER PTHR23029 127 156 7.5E-27 T 22-04-2016 APT61_RS06615 b57fcbf4e90d2e949c221fe3f6edd8d7 161 Gene3D G3DSA:3.40.50.1240 1 157 1.1E-41 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APT61_RS06615 b57fcbf4e90d2e949c221fe3f6edd8d7 161 PANTHER PTHR23029:SF49 1 77 7.5E-27 T 22-04-2016 APT61_RS06615 b57fcbf4e90d2e949c221fe3f6edd8d7 161 PANTHER PTHR23029:SF49 127 156 7.5E-27 T 22-04-2016 APT61_RS06615 b57fcbf4e90d2e949c221fe3f6edd8d7 161 SUPERFAMILY SSF53254 1 145 8.16E-18 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APT61_RS06615 b57fcbf4e90d2e949c221fe3f6edd8d7 161 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 72 1.7E-7 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APT61_RS06615 b57fcbf4e90d2e949c221fe3f6edd8d7 161 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 1.4E-57 T 22-04-2016 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- APT61_RS16505 3d807f20d10eb5a25f5b67deb651bf92 142 PANTHER PTHR31964 1 142 1.4E-87 T 22-04-2016 APT61_RS16505 3d807f20d10eb5a25f5b67deb651bf92 142 PANTHER PTHR31964:SF48 1 142 1.4E-87 T 22-04-2016 APT61_RS16505 3d807f20d10eb5a25f5b67deb651bf92 142 PRINTS PR01438 Universal stress protein signature 2 20 1.7E-13 T 22-04-2016 IPR006015 Universal stress protein A APT61_RS16505 3d807f20d10eb5a25f5b67deb651bf92 142 PRINTS PR01438 Universal stress protein signature 120 142 1.7E-13 T 22-04-2016 IPR006015 Universal stress protein A APT61_RS16505 3d807f20d10eb5a25f5b67deb651bf92 142 PRINTS PR01438 Universal stress protein signature 103 115 1.7E-13 T 22-04-2016 IPR006015 Universal stress protein A APT61_RS16505 3d807f20d10eb5a25f5b67deb651bf92 142 Gene3D G3DSA:3.40.50.620 2 142 1.2E-28 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS16505 3d807f20d10eb5a25f5b67deb651bf92 142 SUPERFAMILY SSF52402 1 142 2.26E-25 T 22-04-2016 APT61_RS16505 3d807f20d10eb5a25f5b67deb651bf92 142 Pfam PF00582 Universal stress protein family 1 142 2.8E-24 T 22-04-2016 IPR006016 UspA GO:0006950 APT61_RS06185 fbbcc20087179b4135bd475ff352d014 189 Gene3D G3DSA:3.30.70.260 92 186 5.8E-43 T 22-04-2016 APT61_RS06185 fbbcc20087179b4135bd475ff352d014 189 SUPERFAMILY SSF55021 6 87 1.29E-16 T 22-04-2016 APT61_RS06185 fbbcc20087179b4135bd475ff352d014 189 Pfam PF13740 ACT domain 7 82 5.0E-26 T 22-04-2016 APT61_RS06185 fbbcc20087179b4135bd475ff352d014 189 PIRSF PIRSF028103 5 180 2.0E-66 T 22-04-2016 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 APT61_RS06185 fbbcc20087179b4135bd475ff352d014 189 PANTHER PTHR34875:SF3 1 189 4.4E-84 T 22-04-2016 APT61_RS06185 fbbcc20087179b4135bd475ff352d014 189 SUPERFAMILY SSF55021 93 179 4.12E-17 T 22-04-2016 APT61_RS06185 fbbcc20087179b4135bd475ff352d014 189 PANTHER PTHR34875 1 189 4.4E-84 T 22-04-2016 APT61_RS06185 fbbcc20087179b4135bd475ff352d014 189 Gene3D G3DSA:3.30.70.260 6 84 2.2E-32 T 22-04-2016 APT61_RS15250 145190b3c81d8541bc1dcf880a964cae 276 SUPERFAMILY SSF47090 198 273 4.63E-18 T 22-04-2016 IPR002477 Peptidoglycan binding-like APT61_RS15250 145190b3c81d8541bc1dcf880a964cae 276 SMART SM00644 32 178 1.8E-36 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APT61_RS15250 145190b3c81d8541bc1dcf880a964cae 276 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 43 179 3.8E-20 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APT61_RS15250 145190b3c81d8541bc1dcf880a964cae 276 PANTHER PTHR30417 43 276 1.3E-78 T 22-04-2016 APT61_RS15250 145190b3c81d8541bc1dcf880a964cae 276 Gene3D G3DSA:3.40.80.10 40 197 2.5E-56 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APT61_RS15250 145190b3c81d8541bc1dcf880a964cae 276 SUPERFAMILY SSF55846 32 194 4.58E-52 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APT61_RS10665 033b93161d2639b34953fb44e31dd673 472 PANTHER PTHR11751:SF314 84 465 1.4E-197 T 22-04-2016 APT61_RS10665 033b93161d2639b34953fb44e31dd673 472 PANTHER PTHR11751 84 465 1.4E-197 T 22-04-2016 APT61_RS10665 033b93161d2639b34953fb44e31dd673 472 SMART SM00345 7 66 6.7E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS10665 033b93161d2639b34953fb44e31dd673 472 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 3.4E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS10665 033b93161d2639b34953fb44e31dd673 472 SUPERFAMILY SSF46785 2 70 9.53E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10665 033b93161d2639b34953fb44e31dd673 472 Gene3D G3DSA:3.90.1150.10 345 444 4.7E-4 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS10665 033b93161d2639b34953fb44e31dd673 472 Gene3D G3DSA:3.40.640.10 144 344 3.2E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS10665 033b93161d2639b34953fb44e31dd673 472 Pfam PF00155 Aminotransferase class I and II 146 445 1.0E-28 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS10665 033b93161d2639b34953fb44e31dd673 472 SUPERFAMILY SSF53383 91 465 4.76E-91 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS10665 033b93161d2639b34953fb44e31dd673 472 Gene3D G3DSA:1.10.10.10 1 67 6.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15370 091dc80625ba133d2d9b49059ba57218 308 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 133 148 - T 22-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 APT61_RS15370 091dc80625ba133d2d9b49059ba57218 308 PANTHER PTHR31480:SF0 13 302 5.3E-62 T 22-04-2016 APT61_RS15370 091dc80625ba133d2d9b49059ba57218 308 Gene3D G3DSA:1.10.600.10 6 299 3.6E-80 T 22-04-2016 IPR008949 Isoprenoid synthase domain APT61_RS15370 091dc80625ba133d2d9b49059ba57218 308 PANTHER PTHR31480 13 302 5.3E-62 T 22-04-2016 APT61_RS15370 091dc80625ba133d2d9b49059ba57218 308 Pfam PF00494 Squalene/phytoene synthase 16 266 7.0E-67 T 22-04-2016 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 APT61_RS15370 091dc80625ba133d2d9b49059ba57218 308 SUPERFAMILY SSF48576 7 291 1.34E-79 T 22-04-2016 IPR008949 Isoprenoid synthase domain APT61_RS15370 091dc80625ba133d2d9b49059ba57218 308 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 163 188 - T 22-04-2016 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 737 834 9.03E-12 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 1444 1541 1.96E-12 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 2534 2602 4.84E-7 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 PANTHER PTHR24026 440 1817 4.3E-119 T 22-04-2016 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 PANTHER PTHR24026 3432 3437 4.3E-119 T 22-04-2016 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 548 636 2.3E-15 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 851 939 4.5E-15 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 1152 1242 1.2E-15 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 1051 1141 9.2E-16 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 1356 1444 3.8E-15 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 750 838 6.1E-15 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 1558 1643 2.1E-15 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 952 1040 1.1E-14 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 1663 1760 1.4E-16 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 647 737 2.1E-14 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 1455 1545 1.2E-15 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 1255 1343 5.0E-15 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 447 535 1.6E-15 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 838 935 6.54E-12 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 1141 1238 1.02E-12 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 PRINTS PR00205 Cadherin signature 811 823 2.5E-9 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 PRINTS PR00205 Cadherin signature 484 503 2.5E-9 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 PRINTS PR00205 Cadherin signature 1750 1767 2.5E-9 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 PRINTS PR00205 Cadherin signature 1400 1426 2.5E-9 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 PRINTS PR00205 Cadherin signature 743 772 2.5E-9 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 2318 2408 5.3E-7 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Gene3D G3DSA:2.60.40.60 2524 2601 7.0E-8 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 1664 1767 1.1E-14 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Pfam PF12245 Bacterial Ig-like domain (group 3) 2288 2317 0.077 T 22-04-2016 IPR022038 Bacterial Ig-like domain APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 1343 1440 3.27E-12 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 636 733 1.83E-11 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Pfam PF13205 Bacterial Ig-like domain 3183 3295 3.1E-19 T 22-04-2016 IPR032812 SbsA, Ig-like domain APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 1040 1137 1.57E-12 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 2317 2408 4.84E-8 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 PANTHER PTHR24026:SF45 440 1817 4.3E-119 T 22-04-2016 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 PANTHER PTHR24026:SF45 3432 3437 4.3E-119 T 22-04-2016 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 1545 1640 3.66E-12 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 1573 1650 7.4E-8 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 2345 2412 0.11 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 967 1044 2.3E-7 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 765 842 1.6E-7 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 563 640 9.1E-8 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 1371 1448 8.9E-8 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 1169 1246 4.3E-8 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 465 539 7.2E-10 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 1270 1347 7.1E-7 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 866 943 1.0E-7 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 1681 1766 2.6E-15 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 1068 1145 7.8E-8 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 2538 2610 0.025 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 1472 1549 4.9E-8 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SMART SM00112 664 741 7.5E-6 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 535 632 2.49E-12 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 939 1036 7.59E-12 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Pfam PF00028 Cadherin domain 1559 1642 4.2E-8 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Pfam PF00028 Cadherin domain 751 834 1.2E-7 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Pfam PF00028 Cadherin domain 953 1036 4.2E-7 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Pfam PF00028 Cadherin domain 1458 1541 5.9E-8 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Pfam PF00028 Cadherin domain 1255 1339 1.1E-7 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Pfam PF00028 Cadherin domain 1356 1440 3.7E-8 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Pfam PF00028 Cadherin domain 1054 1137 5.0E-8 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Pfam PF00028 Cadherin domain 449 532 7.9E-9 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Pfam PF00028 Cadherin domain 549 632 1.5E-7 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Pfam PF00028 Cadherin domain 1155 1238 3.4E-8 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Pfam PF00028 Cadherin domain 1665 1759 3.8E-9 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 Pfam PF00028 Cadherin domain 852 935 1.1E-7 T 22-04-2016 IPR002126 Cadherin GO:0005509|GO:0007156|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 437 532 5.63E-15 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS13500 be8d36df1afe72b12e26cca86925f97d 3460 SUPERFAMILY SSF49313 1242 1339 5.76E-12 T 22-04-2016 IPR015919 Cadherin-like GO:0005509|GO:0016020 APT61_RS11060 b010269fb774760378d800fa0f6cb1cd 307 Pfam PF03466 LysR substrate binding domain 108 305 6.9E-26 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS11060 b010269fb774760378d800fa0f6cb1cd 307 SUPERFAMILY SSF53850 109 306 3.8E-33 T 22-04-2016 APT61_RS11060 b010269fb774760378d800fa0f6cb1cd 307 PANTHER PTHR30537 16 306 9.0E-74 T 22-04-2016 APT61_RS11060 b010269fb774760378d800fa0f6cb1cd 307 Gene3D G3DSA:3.40.190.10 111 209 1.2E-25 T 22-04-2016 APT61_RS11060 b010269fb774760378d800fa0f6cb1cd 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 83 3.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS11060 b010269fb774760378d800fa0f6cb1cd 307 PANTHER PTHR30537:SF26 16 306 9.0E-74 T 22-04-2016 APT61_RS11060 b010269fb774760378d800fa0f6cb1cd 307 SUPERFAMILY SSF46785 24 129 1.36E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11060 b010269fb774760378d800fa0f6cb1cd 307 Gene3D G3DSA:1.10.10.10 20 102 7.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04475 ac91d969a62c7fa2335508181c4ced67 443 SUPERFAMILY SSF53633 5 291 6.84E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS04475 ac91d969a62c7fa2335508181c4ced67 443 Pfam PF00583 Acetyltransferase (GNAT) family 347 414 1.9E-6 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS04475 ac91d969a62c7fa2335508181c4ced67 443 Gene3D G3DSA:3.40.630.30 294 440 1.2E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS04475 ac91d969a62c7fa2335508181c4ced67 443 PIRSF PIRSF000423 1 442 1.8E-208 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 APT61_RS04475 ac91d969a62c7fa2335508181c4ced67 443 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 442 1.3E-197 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 APT61_RS04475 ac91d969a62c7fa2335508181c4ced67 443 SUPERFAMILY SSF55729 297 418 2.13E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS04475 ac91d969a62c7fa2335508181c4ced67 443 PANTHER PTHR30602:SF3 1 442 0.0 T 22-04-2016 APT61_RS04475 ac91d969a62c7fa2335508181c4ced67 443 Pfam PF00696 Amino acid kinase family 26 268 5.5E-30 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS04475 ac91d969a62c7fa2335508181c4ced67 443 Gene3D G3DSA:3.40.1160.10 24 291 2.3E-67 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS04475 ac91d969a62c7fa2335508181c4ced67 443 PANTHER PTHR30602 1 442 0.0 T 22-04-2016 APT61_RS04475 ac91d969a62c7fa2335508181c4ced67 443 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 442 234.674 T 22-04-2016 IPR010167 Amino-acid N-acetyltransferase (ArgA) GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154|UniPathway: UPA00068 APT61_RS02855 0b1990f968ab7e63d0a55cb6726a872d 335 SUPERFAMILY SSF51679 6 327 1.65E-86 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS02855 0b1990f968ab7e63d0a55cb6726a872d 335 Gene3D G3DSA:3.20.20.30 7 326 2.0E-91 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS02855 0b1990f968ab7e63d0a55cb6726a872d 335 PANTHER PTHR30137 1 333 1.8E-151 T 22-04-2016 APT61_RS02855 0b1990f968ab7e63d0a55cb6726a872d 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 328 3.1E-134 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 APT61_RS02855 0b1990f968ab7e63d0a55cb6726a872d 335 Pfam PF00296 Luciferase-like monooxygenase 14 305 3.5E-36 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS02855 0b1990f968ab7e63d0a55cb6726a872d 335 PANTHER PTHR30137:SF2 1 333 1.8E-151 T 22-04-2016 APT61_RS06815 39a2d02754362eaa4789aa46d87bd66b 199 Gene3D G3DSA:1.10.3210.10 2 194 2.2E-52 T 22-04-2016 IPR006674 HD domain APT61_RS06815 39a2d02754362eaa4789aa46d87bd66b 199 SUPERFAMILY SSF109604 3 193 9.42E-45 T 22-04-2016 APT61_RS06815 39a2d02754362eaa4789aa46d87bd66b 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 44.349 T 22-04-2016 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 APT61_RS06815 39a2d02754362eaa4789aa46d87bd66b 199 Pfam PF13023 HD domain 11 162 6.2E-17 T 22-04-2016 IPR006674 HD domain APT61_RS06815 39a2d02754362eaa4789aa46d87bd66b 199 PANTHER PTHR11845 2 190 8.4E-50 T 22-04-2016 APT61_RS06815 39a2d02754362eaa4789aa46d87bd66b 199 SMART SM00471 26 151 1.3E-6 T 22-04-2016 IPR003607 HD/PDEase domain APT61_RS06815 39a2d02754362eaa4789aa46d87bd66b 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 172 7.0E-43 T 22-04-2016 APT61_RS02975 bad828bf9e19a6143310326acc4194fb 443 TIGRFAM TIGR00814 stp: serine transporter 17 433 2.4E-170 T 22-04-2016 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 APT61_RS02975 bad828bf9e19a6143310326acc4194fb 443 PANTHER PTHR35334:SF1 1 443 0.0 T 22-04-2016 APT61_RS02975 bad828bf9e19a6143310326acc4194fb 443 PANTHER PTHR35334 1 443 0.0 T 22-04-2016 APT61_RS02975 bad828bf9e19a6143310326acc4194fb 443 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 443 55.58 T 22-04-2016 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 APT61_RS02975 bad828bf9e19a6143310326acc4194fb 443 Pfam PF03222 Tryptophan/tyrosine permease family 29 439 4.8E-10 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APT61_RS06850 255fbf8b8778dbc37f81e1a12334f3b4 445 SMART SM00928 336 381 1.0E-22 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 APT61_RS06850 255fbf8b8778dbc37f81e1a12334f3b4 445 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 54 226 1.5E-50 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain APT61_RS06850 255fbf8b8778dbc37f81e1a12334f3b4 445 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 13 423 8.2E-205 T 22-04-2016 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 APT61_RS06850 255fbf8b8778dbc37f81e1a12334f3b4 445 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 349 360 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 APT61_RS06850 255fbf8b8778dbc37f81e1a12334f3b4 445 SUPERFAMILY SSF140490 334 428 4.58E-32 T 22-04-2016 APT61_RS06850 255fbf8b8778dbc37f81e1a12334f3b4 445 SUPERFAMILY SSF142019 13 246 1.83E-85 T 22-04-2016 APT61_RS06850 255fbf8b8778dbc37f81e1a12334f3b4 445 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 339 421 8.1E-27 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 APT61_RS06850 255fbf8b8778dbc37f81e1a12334f3b4 445 PANTHER PTHR11780 3 425 2.6E-224 T 22-04-2016 APT61_RS06850 255fbf8b8778dbc37f81e1a12334f3b4 445 Pfam PF10531 SLBB domain 253 295 5.6E-7 T 22-04-2016 IPR019554 Soluble ligand binding domain APT61_RS06850 255fbf8b8778dbc37f81e1a12334f3b4 445 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 174 189 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 APT61_RS06850 255fbf8b8778dbc37f81e1a12334f3b4 445 SUPERFAMILY SSF142984 248 330 1.26E-20 T 22-04-2016 APT61_RS21170 4adfb5e5ccb6200cdff85e0f36368431 256 PANTHER PTHR34266 1 256 2.5E-157 T 22-04-2016 APT61_RS21170 4adfb5e5ccb6200cdff85e0f36368431 256 SUPERFAMILY SSF110399 1 235 1.44E-83 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 APT61_RS21170 4adfb5e5ccb6200cdff85e0f36368431 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.985 T 22-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 APT61_RS21170 4adfb5e5ccb6200cdff85e0f36368431 256 Gene3D G3DSA:3.20.20.70 1 252 2.5E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS21170 4adfb5e5ccb6200cdff85e0f36368431 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 2.1E-109 T 22-04-2016 APT61_RS06695 586557e2cb09fdf899e3177c14c51a01 301 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 39.0 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS06695 586557e2cb09fdf899e3177c14c51a01 301 PANTHER PTHR22855 1 300 4.0E-185 T 22-04-2016 APT61_RS06695 586557e2cb09fdf899e3177c14c51a01 301 SUPERFAMILY SSF52096 23 282 2.12E-90 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS06695 586557e2cb09fdf899e3177c14c51a01 301 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 282 1.2E-151 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS06695 586557e2cb09fdf899e3177c14c51a01 301 Pfam PF01039 Carboxyl transferase domain 92 239 2.3E-16 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS06695 586557e2cb09fdf899e3177c14c51a01 301 PANTHER PTHR22855:SF17 1 300 4.0E-185 T 22-04-2016 APT61_RS06695 586557e2cb09fdf899e3177c14c51a01 301 Gene3D G3DSA:3.90.226.10 17 284 5.9E-80 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS06695 586557e2cb09fdf899e3177c14c51a01 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 3.2E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS06695 586557e2cb09fdf899e3177c14c51a01 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 3.2E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS06695 586557e2cb09fdf899e3177c14c51a01 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 3.2E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS06695 586557e2cb09fdf899e3177c14c51a01 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 3.2E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS06695 586557e2cb09fdf899e3177c14c51a01 301 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 3.2E-39 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS02080 707f49a5e41dfbeb219aeb4bac8402d7 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.439 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APT61_RS02080 707f49a5e41dfbeb219aeb4bac8402d7 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 APT61_RS02080 707f49a5e41dfbeb219aeb4bac8402d7 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.6E-45 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 APT61_RS02080 707f49a5e41dfbeb219aeb4bac8402d7 92 Pfam PF00203 Ribosomal protein S19 3 83 6.0E-36 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APT61_RS02080 707f49a5e41dfbeb219aeb4bac8402d7 92 Gene3D G3DSA:3.30.860.10 1 91 2.8E-40 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APT61_RS02080 707f49a5e41dfbeb219aeb4bac8402d7 92 PANTHER PTHR11880 1 92 3.5E-57 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APT61_RS02080 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APT61_RS02080 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APT61_RS02080 707f49a5e41dfbeb219aeb4bac8402d7 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.1E-24 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APT61_RS02080 707f49a5e41dfbeb219aeb4bac8402d7 92 SUPERFAMILY SSF54570 3 84 6.02E-35 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 APT61_RS02080 707f49a5e41dfbeb219aeb4bac8402d7 92 PIRSF PIRSF002144 1 92 2.8E-31 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 APT61_RS13250 d40af3db3abeb9c3e8772312ddf6aee1 183 Gene3D G3DSA:3.40.109.10 1 168 2.7E-40 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APT61_RS13250 d40af3db3abeb9c3e8772312ddf6aee1 183 PANTHER PTHR23026:SF107 1 167 3.4E-90 T 22-04-2016 APT61_RS13250 d40af3db3abeb9c3e8772312ddf6aee1 183 PANTHER PTHR23026 1 167 3.4E-90 T 22-04-2016 APT61_RS13250 d40af3db3abeb9c3e8772312ddf6aee1 183 SUPERFAMILY SSF55469 1 168 1.31E-38 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APT61_RS13250 d40af3db3abeb9c3e8772312ddf6aee1 183 PIRSF PIRSF000232 1 183 1.1E-66 T 22-04-2016 IPR026021 Putative NAD(P)H nitroreductase YdjA-like KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.- APT61_RS13250 d40af3db3abeb9c3e8772312ddf6aee1 183 Pfam PF00881 Nitroreductase family 9 161 1.4E-23 T 22-04-2016 IPR029479 Nitroreductase APT61_RS04160 d857c4cea19daa8bf072e55d2f6bbf10 243 PANTHER PTHR10937 5 237 9.0E-47 T 22-04-2016 APT61_RS04160 d857c4cea19daa8bf072e55d2f6bbf10 243 Gene3D G3DSA:1.10.10.10 5 73 9.3E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04160 d857c4cea19daa8bf072e55d2f6bbf10 243 PANTHER PTHR10937:SF9 5 237 9.0E-47 T 22-04-2016 APT61_RS04160 d857c4cea19daa8bf072e55d2f6bbf10 243 Pfam PF01380 SIS domain 108 226 1.7E-15 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APT61_RS04160 d857c4cea19daa8bf072e55d2f6bbf10 243 ProSitePatterns PS00356 LacI-type HTH domain signature. 33 51 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS04160 d857c4cea19daa8bf072e55d2f6bbf10 243 Gene3D G3DSA:3.40.50.10490 99 241 1.4E-29 T 22-04-2016 APT61_RS04160 d857c4cea19daa8bf072e55d2f6bbf10 243 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 72 5.0E-15 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APT61_RS04160 d857c4cea19daa8bf072e55d2f6bbf10 243 SUPERFAMILY SSF53697 85 230 5.76E-31 T 22-04-2016 APT61_RS04160 d857c4cea19daa8bf072e55d2f6bbf10 243 SUPERFAMILY SSF46689 6 73 2.15E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 PANTHER PTHR24093:SF254 12 905 2.9E-283 T 22-04-2016 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 Gene3D G3DSA:3.40.1110.10 331 548 1.3E-44 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 SUPERFAMILY SSF81665 692 904 2.48E-113 T 22-04-2016 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 SUPERFAMILY SSF81665 21 131 2.48E-113 T 22-04-2016 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 SUPERFAMILY SSF81665 241 335 2.48E-113 T 22-04-2016 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 Pfam PF00690 Cation transporter/ATPase, N-terminus 22 87 1.3E-17 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 SUPERFAMILY SSF81660 348 545 4.09E-42 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 99 362 3.3E-37 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 610 735 2.1E-36 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 Gene3D G3DSA:2.70.150.10 36 72 7.1E-42 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 Gene3D G3DSA:2.70.150.10 126 240 7.1E-42 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 343 349 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 642 658 2.8E-20 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 500 518 2.8E-20 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 614 630 2.8E-20 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 674 699 2.8E-20 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 Pfam PF00702 haloacid dehalogenase-like hydrolase 337 656 1.4E-22 T 22-04-2016 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 Pfam PF00689 Cation transporting ATPase, C-terminus 727 898 9.9E-38 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 Pfam PF00122 E1-E2 ATPase 99 332 1.4E-62 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 SMART SM00831 20 93 1.5E-30 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 SUPERFAMILY SSF81653 132 240 6.93E-30 T 22-04-2016 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 661 1.1E-40 T 22-04-2016 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 563 573 1.1E-40 T 22-04-2016 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 178 192 1.1E-40 T 22-04-2016 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 666 678 1.1E-40 T 22-04-2016 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 341 355 1.1E-40 T 22-04-2016 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 541 552 1.1E-40 T 22-04-2016 APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 SUPERFAMILY SSF56784 339 359 8.74E-61 T 22-04-2016 IPR023214 HAD-like domain APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 SUPERFAMILY SSF56784 497 745 8.74E-61 T 22-04-2016 IPR023214 HAD-like domain APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 Gene3D G3DSA:1.20.1110.10 611 901 1.6E-102 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 Gene3D G3DSA:1.20.1110.10 73 125 1.6E-102 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain APT61_RS16820 a6aafa8031141d679e905a14d775895b 906 PANTHER PTHR24093 12 905 2.9E-283 T 22-04-2016 APT61_RS01910 052d06cf45ce26ce63588ff31b2e0de3 72 Gene3D G3DSA:1.10.10.610 1 71 1.1E-38 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 APT61_RS01910 052d06cf45ce26ce63588ff31b2e0de3 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 3.0E-29 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 APT61_RS01910 052d06cf45ce26ce63588ff31b2e0de3 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 69 3.4E-36 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 APT61_RS01910 052d06cf45ce26ce63588ff31b2e0de3 72 PIRSF PIRSF006169 1 72 1.6E-38 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 APT61_RS01910 052d06cf45ce26ce63588ff31b2e0de3 72 SUPERFAMILY SSF118001 1 70 6.28E-30 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 APT61_RS01910 052d06cf45ce26ce63588ff31b2e0de3 72 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 25.581 T 22-04-2016 IPR010648 Uncharacterised protein family UPF0270 APT61_RS12070 8c039deb2bea1e6f0c83f6f7eb71570e 345 PANTHER PTHR21716:SF18 1 344 1.1E-206 T 22-04-2016 APT61_RS12070 8c039deb2bea1e6f0c83f6f7eb71570e 345 PANTHER PTHR21716 1 344 1.1E-206 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APT61_RS12070 8c039deb2bea1e6f0c83f6f7eb71570e 345 Pfam PF01594 Domain of unknown function DUF20 14 328 9.5E-71 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APT61_RS12140 75edf4e886efc068d05f09baf31b5371 460 PANTHER PTHR11785 1 457 2.1E-230 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS12140 75edf4e886efc068d05f09baf31b5371 460 Pfam PF13520 Amino acid permease 5 411 3.2E-75 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS12140 75edf4e886efc068d05f09baf31b5371 460 PIRSF PIRSF006060 1 459 1.4E-43 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS12140 75edf4e886efc068d05f09baf31b5371 460 PANTHER PTHR11785:SF77 1 457 2.1E-230 T 22-04-2016 APT61_RS12140 75edf4e886efc068d05f09baf31b5371 460 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 459 1.3E-178 T 22-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 APT61_RS01800 1f98d2d78af91029c112b6c972fabdf1 411 PRINTS PR01032 Gene IV protein signature 389 411 1.2E-9 T 22-04-2016 APT61_RS01800 1f98d2d78af91029c112b6c972fabdf1 411 PRINTS PR01032 Gene IV protein signature 270 293 1.2E-9 T 22-04-2016 APT61_RS01800 1f98d2d78af91029c112b6c972fabdf1 411 PRINTS PR01032 Gene IV protein signature 336 364 1.2E-9 T 22-04-2016 APT61_RS01800 1f98d2d78af91029c112b6c972fabdf1 411 PRINTS PR01032 Gene IV protein signature 229 252 1.2E-9 T 22-04-2016 APT61_RS01800 1f98d2d78af91029c112b6c972fabdf1 411 Pfam PF03958 Bacterial type II/III secretion system short domain 119 179 5.8E-11 T 22-04-2016 IPR005644 NolW-like APT61_RS01800 1f98d2d78af91029c112b6c972fabdf1 411 Pfam PF00263 Bacterial type II and III secretion system protein 249 408 8.6E-45 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 APT61_RS01800 1f98d2d78af91029c112b6c972fabdf1 411 PRINTS PR00811 Bacterial general secretion pathway protein D signature 373 391 5.0E-9 T 22-04-2016 IPR001775 GspD/PilQ family APT61_RS01800 1f98d2d78af91029c112b6c972fabdf1 411 PRINTS PR00811 Bacterial general secretion pathway protein D signature 396 410 5.0E-9 T 22-04-2016 IPR001775 GspD/PilQ family APT61_RS01800 1f98d2d78af91029c112b6c972fabdf1 411 PRINTS PR00811 Bacterial general secretion pathway protein D signature 245 269 5.0E-9 T 22-04-2016 IPR001775 GspD/PilQ family APT61_RS01800 1f98d2d78af91029c112b6c972fabdf1 411 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 354 387 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 APT61_RS01800 1f98d2d78af91029c112b6c972fabdf1 411 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 22 408 1.3E-120 T 22-04-2016 IPR013355 Type IV pilus secretin PilQ GO:0009297|GO:0009306 APT61_RS01800 1f98d2d78af91029c112b6c972fabdf1 411 PANTHER PTHR30604 5 411 4.3E-108 T 22-04-2016 APT61_RS03050 edaae3b1f88bdf2f10c8b1d376dc4657 220 PANTHER PTHR30353:SF11 1 215 1.9E-164 T 22-04-2016 APT61_RS03050 edaae3b1f88bdf2f10c8b1d376dc4657 220 Pfam PF09335 SNARE associated Golgi protein 48 174 8.3E-22 T 22-04-2016 IPR032816 SNARE associated Golgi protein APT61_RS03050 edaae3b1f88bdf2f10c8b1d376dc4657 220 PANTHER PTHR30353 1 215 1.9E-164 T 22-04-2016 IPR032818 DedA family APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 PANTHER PTHR30523 1 883 0.0 T 22-04-2016 APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 Gene3D G3DSA:1.20.1440.90 273 388 2.5E-31 T 22-04-2016 APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 PANTHER PTHR30523:SF3 1 883 0.0 T 22-04-2016 APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 577 606 3.4E-68 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 709 735 3.4E-68 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 3.4E-68 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 3.4E-68 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 386 406 3.4E-68 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 535 555 3.4E-68 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 3.4E-68 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 883 4.9E-293 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 SUPERFAMILY SSF51621 6 883 0.0 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 883 18.423 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APT61_RS00665 05260136f5cfb2ba3ab73f2af2b96f0f 883 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 537 549 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 APT61_RS07930 c6d7e72b18d019e51c7d1849b2fac030 437 Gene3D G3DSA:1.20.1250.20 25 235 1.4E-19 T 22-04-2016 APT61_RS07930 c6d7e72b18d019e51c7d1849b2fac030 437 Gene3D G3DSA:1.20.1250.20 255 435 4.1E-20 T 22-04-2016 APT61_RS07930 c6d7e72b18d019e51c7d1849b2fac030 437 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 31 425 3.4E-147 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 APT61_RS07930 c6d7e72b18d019e51c7d1849b2fac030 437 Pfam PF00083 Sugar (and other) transporter 29 231 1.9E-16 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APT61_RS07930 c6d7e72b18d019e51c7d1849b2fac030 437 PANTHER PTHR23508 19 436 5.0E-172 T 22-04-2016 APT61_RS07930 c6d7e72b18d019e51c7d1849b2fac030 437 SUPERFAMILY SSF103473 22 434 3.4E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS07930 c6d7e72b18d019e51c7d1849b2fac030 437 PANTHER PTHR23508:SF1 19 436 5.0E-172 T 22-04-2016 APT61_RS07930 c6d7e72b18d019e51c7d1849b2fac030 437 ProSitePatterns PS00217 Sugar transport proteins signature 2. 135 160 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS07930 c6d7e72b18d019e51c7d1849b2fac030 437 Pfam PF07690 Major Facilitator Superfamily 264 430 5.4E-11 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS01250 af89aa442afed98f23121983ed9ae894 549 ProSitePatterns PS00928 Trehalase signature 2. 459 468 - T 22-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS01250 af89aa442afed98f23121983ed9ae894 549 Pfam PF01204 Trehalase 71 546 7.7E-163 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS01250 af89aa442afed98f23121983ed9ae894 549 SUPERFAMILY SSF48208 55 547 8.33E-148 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APT61_RS01250 af89aa442afed98f23121983ed9ae894 549 PANTHER PTHR23403:SF8 2 549 0.0 T 22-04-2016 APT61_RS01250 af89aa442afed98f23121983ed9ae894 549 PANTHER PTHR23403 2 549 0.0 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS01250 af89aa442afed98f23121983ed9ae894 549 Hamap MF_01059 Cytoplasmic trehalase [treF]. 34 549 78.797 T 22-04-2016 IPR023715 Trehalase, cytoplasmic GO:0004555|GO:0005737|GO:0005993|GO:0071474 KEGG: 00500+3.2.1.28|UniPathway: UPA00300 APT61_RS01250 af89aa442afed98f23121983ed9ae894 549 ProSitePatterns PS00927 Trehalase signature 1. 165 178 - T 22-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS01250 af89aa442afed98f23121983ed9ae894 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 314 331 1.9E-45 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS01250 af89aa442afed98f23121983ed9ae894 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 346 363 1.9E-45 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS01250 af89aa442afed98f23121983ed9ae894 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 530 543 1.9E-45 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS01250 af89aa442afed98f23121983ed9ae894 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 281 298 1.9E-45 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS01250 af89aa442afed98f23121983ed9ae894 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 452 468 1.9E-45 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS01250 af89aa442afed98f23121983ed9ae894 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 389 405 1.9E-45 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS01250 af89aa442afed98f23121983ed9ae894 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 207 225 1.9E-45 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS21620 0faf0f5f401627f475a641d43974688a 367 Gene3D G3DSA:3.40.50.2000 12 170 9.4E-35 T 22-04-2016 APT61_RS21620 0faf0f5f401627f475a641d43974688a 367 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 13 326 1.2E-88 T 22-04-2016 IPR011916 Lipopolysaccharide heptosyltransferase III, putative KEGG: 00231+2.-.-.-|UniPathway: UPA00958 APT61_RS21620 0faf0f5f401627f475a641d43974688a 367 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 85 337 6.2E-41 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APT61_RS21620 0faf0f5f401627f475a641d43974688a 367 PANTHER PTHR30160:SF1 8 362 8.4E-70 T 22-04-2016 APT61_RS21620 0faf0f5f401627f475a641d43974688a 367 PANTHER PTHR30160 8 362 8.4E-70 T 22-04-2016 APT61_RS21620 0faf0f5f401627f475a641d43974688a 367 SUPERFAMILY SSF53756 12 362 8.16E-83 T 22-04-2016 APT61_RS21620 0faf0f5f401627f475a641d43974688a 367 Gene3D G3DSA:3.40.50.2000 197 362 3.8E-51 T 22-04-2016 APT61_RS12705 468e19696734276fc080286cc6060d38 341 SUPERFAMILY SSF53822 60 340 2.16E-93 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS12705 468e19696734276fc080286cc6060d38 341 PANTHER PTHR30146:SF30 1 340 6.0E-162 T 22-04-2016 APT61_RS12705 468e19696734276fc080286cc6060d38 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 59.019 T 22-04-2016 IPR023588 Transcription regulator HTH, PurR GO:0006355 UniPathway: UPA00488 APT61_RS12705 468e19696734276fc080286cc6060d38 341 SUPERFAMILY SSF47413 1 59 1.37E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS12705 468e19696734276fc080286cc6060d38 341 Gene3D G3DSA:1.10.260.40 2 60 7.9E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS12705 468e19696734276fc080286cc6060d38 341 SMART SM00354 1 71 3.9E-37 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS12705 468e19696734276fc080286cc6060d38 341 Gene3D G3DSA:3.40.50.2300 61 170 1.9E-34 T 22-04-2016 APT61_RS12705 468e19696734276fc080286cc6060d38 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 1.1E-39 T 22-04-2016 APT61_RS12705 468e19696734276fc080286cc6060d38 341 PANTHER PTHR30146 1 340 6.0E-162 T 22-04-2016 APT61_RS12705 468e19696734276fc080286cc6060d38 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS12705 468e19696734276fc080286cc6060d38 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.7E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS12705 468e19696734276fc080286cc6060d38 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.7E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS12705 468e19696734276fc080286cc6060d38 341 Gene3D G3DSA:3.40.50.2300 171 332 3.6E-62 T 22-04-2016 APT61_RS12705 468e19696734276fc080286cc6060d38 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 9.4E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 Gene3D G3DSA:3.30.470.20 85 103 1.6E-50 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 Gene3D G3DSA:3.30.470.20 181 305 1.6E-50 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 Gene3D G3DSA:3.40.50.20 3 84 1.5E-26 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 PANTHER PTHR23132:SF0 4 305 1.5E-94 T 22-04-2016 APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 SUPERFAMILY SSF52440 3 96 1.25E-28 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 Gene3D G3DSA:3.30.1490.20 107 180 2.9E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 SUPERFAMILY SSF56059 97 302 2.09E-55 T 22-04-2016 APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 PANTHER PTHR23132 4 305 1.5E-94 T 22-04-2016 APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 2.2E-106 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 PIRSF PIRSF039102 41 306 2.0E-92 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 5.4E-19 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 35.357 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS18600 416b99187c882f3bc9fbaa42eaefbc54 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 302 2.6E-67 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS00860 4635bc3923be3db98e0c84f665a8dbd6 361 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 7 355 1.0E-126 T 22-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain APT61_RS00860 4635bc3923be3db98e0c84f665a8dbd6 361 Gene3D G3DSA:3.40.50.2000 1 194 5.7E-78 T 22-04-2016 APT61_RS00860 4635bc3923be3db98e0c84f665a8dbd6 361 PANTHER PTHR18964 1 356 5.9E-197 T 22-04-2016 APT61_RS00860 4635bc3923be3db98e0c84f665a8dbd6 361 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 1 359 65.873 T 22-04-2016 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|UniPathway: UPA00566 APT61_RS00860 4635bc3923be3db98e0c84f665a8dbd6 361 PANTHER PTHR18964:SF2 1 356 5.9E-197 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 APT61_RS00860 4635bc3923be3db98e0c84f665a8dbd6 361 Gene3D G3DSA:3.40.50.2000 195 356 2.6E-66 T 22-04-2016 APT61_RS00860 4635bc3923be3db98e0c84f665a8dbd6 361 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 357 2.0E-165 T 22-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 APT61_RS00860 4635bc3923be3db98e0c84f665a8dbd6 361 SUPERFAMILY SSF53756 1 356 9.42E-130 T 22-04-2016 APT61_RS15105 65854c71c15ab4237a4777cfc28c13a7 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 294 2.9E-17 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT61_RS15105 65854c71c15ab4237a4777cfc28c13a7 371 SUPERFAMILY SSF111369 52 299 2.75E-28 T 22-04-2016 APT61_RS15105 65854c71c15ab4237a4777cfc28c13a7 371 PANTHER PTHR30572:SF10 1 347 1.2E-226 T 22-04-2016 IPR030190 Macrolide export protein MacA GO:0006810|GO:0019898|GO:0022891 APT61_RS15105 65854c71c15ab4237a4777cfc28c13a7 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 363 3.5E-56 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APT61_RS15105 65854c71c15ab4237a4777cfc28c13a7 371 Gene3D G3DSA:2.40.50.100 61 94 2.3E-14 T 22-04-2016 APT61_RS15105 65854c71c15ab4237a4777cfc28c13a7 371 Gene3D G3DSA:2.40.50.100 183 214 2.3E-14 T 22-04-2016 APT61_RS15105 65854c71c15ab4237a4777cfc28c13a7 371 PANTHER PTHR30572 1 347 1.2E-226 T 22-04-2016 APT61_RS01885 8cd249290397fe2d91b2dbd37648ee2e 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 404 1.2E-202 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 APT61_RS01885 8cd249290397fe2d91b2dbd37648ee2e 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 45.399 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APT61_RS01885 8cd249290397fe2d91b2dbd37648ee2e 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS01885 8cd249290397fe2d91b2dbd37648ee2e 406 SUPERFAMILY SSF53383 19 401 1.61E-124 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS01885 8cd249290397fe2d91b2dbd37648ee2e 406 Gene3D G3DSA:3.90.1150.10 307 402 8.9E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS01885 8cd249290397fe2d91b2dbd37648ee2e 406 Gene3D G3DSA:3.90.1150.10 3 60 8.9E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS01885 8cd249290397fe2d91b2dbd37648ee2e 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 400 8.7E-150 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APT61_RS01885 8cd249290397fe2d91b2dbd37648ee2e 406 Pfam PF00202 Aminotransferase class-III 26 400 2.1E-135 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS01885 8cd249290397fe2d91b2dbd37648ee2e 406 Gene3D G3DSA:3.40.640.10 61 303 1.1E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS01885 8cd249290397fe2d91b2dbd37648ee2e 406 PANTHER PTHR11986 1 405 2.4E-215 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS01885 8cd249290397fe2d91b2dbd37648ee2e 406 PANTHER PTHR11986:SF71 1 405 2.4E-215 T 22-04-2016 APT61_RS13830 921dae3318c5890f9bbb2954fa6139b8 378 Pfam PF08402 TOBE domain 292 372 2.4E-7 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APT61_RS13830 921dae3318c5890f9bbb2954fa6139b8 378 PANTHER PTHR24220:SF150 19 303 4.4E-156 T 22-04-2016 APT61_RS13830 921dae3318c5890f9bbb2954fa6139b8 378 SUPERFAMILY SSF50331 250 364 8.5E-7 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APT61_RS13830 921dae3318c5890f9bbb2954fa6139b8 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS13830 921dae3318c5890f9bbb2954fa6139b8 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 372 3.1E-163 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 APT61_RS13830 921dae3318c5890f9bbb2954fa6139b8 378 SUPERFAMILY SSF52540 17 258 3.96E-87 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13830 921dae3318c5890f9bbb2954fa6139b8 378 PANTHER PTHR24220 19 303 4.4E-156 T 22-04-2016 APT61_RS13830 921dae3318c5890f9bbb2954fa6139b8 378 Pfam PF00005 ABC transporter 34 174 1.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS13830 921dae3318c5890f9bbb2954fa6139b8 378 SMART SM00382 42 225 1.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS13830 921dae3318c5890f9bbb2954fa6139b8 378 Gene3D G3DSA:3.40.50.300 10 252 7.2E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18120 1f02cee083ee1c047ae7bd6ba9164f98 271 PANTHER PTHR30429 3 271 3.1E-155 T 22-04-2016 IPR004872 Lipoprotein NlpA family APT61_RS18120 1f02cee083ee1c047ae7bd6ba9164f98 271 PANTHER PTHR30429:SF1 3 271 3.1E-155 T 22-04-2016 APT61_RS18120 1f02cee083ee1c047ae7bd6ba9164f98 271 SUPERFAMILY SSF53850 33 271 3.04E-83 T 22-04-2016 APT61_RS18120 1f02cee083ee1c047ae7bd6ba9164f98 271 PIRSF PIRSF002854 1 271 2.7E-106 T 22-04-2016 IPR004872 Lipoprotein NlpA family APT61_RS18120 1f02cee083ee1c047ae7bd6ba9164f98 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 4.2E-149 T 22-04-2016 IPR004872 Lipoprotein NlpA family APT61_RS18120 1f02cee083ee1c047ae7bd6ba9164f98 271 Gene3D G3DSA:3.40.190.10 30 162 1.1E-60 T 22-04-2016 APT61_RS18120 1f02cee083ee1c047ae7bd6ba9164f98 271 Pfam PF03180 NLPA lipoprotein 33 271 7.2E-100 T 22-04-2016 IPR004872 Lipoprotein NlpA family APT61_RS03740 7dc9551bb0957065f2fb436af76a3f77 243 PANTHER PTHR30572:SF11 3 226 5.0E-88 T 22-04-2016 APT61_RS03740 7dc9551bb0957065f2fb436af76a3f77 243 PANTHER PTHR30572 3 226 5.0E-88 T 22-04-2016 APT61_RS03740 7dc9551bb0957065f2fb436af76a3f77 243 Pfam PF01618 MotA/TolQ/ExbB proton channel family 82 205 2.1E-34 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APT61_RS03740 7dc9551bb0957065f2fb436af76a3f77 243 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 11 222 6.1E-101 T 22-04-2016 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 APT61_RS09770 d610288c785c007d45ee2fac168943b2 321 SUPERFAMILY SSF54826 3 112 6.59E-34 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS09770 d610288c785c007d45ee2fac168943b2 321 PANTHER PTHR13794 4 321 1.5E-129 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APT61_RS09770 d610288c785c007d45ee2fac168943b2 321 SUPERFAMILY SSF51604 116 308 1.3E-50 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS09770 d610288c785c007d45ee2fac168943b2 321 Pfam PF13378 Enolase C-terminal domain-like 132 294 1.1E-25 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS09770 d610288c785c007d45ee2fac168943b2 321 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 2 112 5.5E-26 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APT61_RS09770 d610288c785c007d45ee2fac168943b2 321 Gene3D G3DSA:3.30.390.10 1 103 1.6E-46 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS09770 d610288c785c007d45ee2fac168943b2 321 SMART SM00922 130 223 4.0E-19 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APT61_RS09770 d610288c785c007d45ee2fac168943b2 321 PANTHER PTHR13794:SF60 4 321 1.5E-129 T 22-04-2016 APT61_RS09770 d610288c785c007d45ee2fac168943b2 321 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APT61_RS09770 d610288c785c007d45ee2fac168943b2 321 Gene3D G3DSA:3.20.20.120 117 317 2.7E-58 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 SUPERFAMILY SSF52540 152 338 8.74E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 PANTHER PTHR11702:SF3 1 379 3.8E-204 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 Pfam PF01926 50S ribosome-binding GTPase 162 284 1.8E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 Gene3D G3DSA:3.40.50.300 160 348 7.4E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.6E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.6E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.6E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.6E-34 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.223 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 PIRSF PIRSF002401 1 377 6.2E-141 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 PANTHER PTHR11702 1 379 3.8E-204 T 22-04-2016 APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 Gene3D G3DSA:2.70.210.12 2 156 3.0E-60 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 Pfam PF01018 GTP1/OBG 3 157 1.0E-60 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 2.1E-148 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 APT61_RS02735 f80c3b84d7eefa3cfb5abc07dfbdb561 391 SUPERFAMILY SSF82051 2 157 1.7E-56 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 SUPERFAMILY SSF52540 4 204 1.43E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 SUPERFAMILY SSF52540 430 569 1.43E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 SUPERFAMILY SSF52540 613 911 5.93E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 Gene3D G3DSA:1.20.1580.10 251 284 4.8E-54 T 22-04-2016 APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 Gene3D G3DSA:1.20.1580.10 91 129 4.8E-54 T 22-04-2016 APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 Gene3D G3DSA:1.20.1580.10 407 477 4.8E-54 T 22-04-2016 APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 PANTHER PTHR32282:SF2 1 941 0.0 T 22-04-2016 APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 Pfam PF00005 ABC transporter 806 860 1.1E-5 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 Gene3D G3DSA:1.20.1580.10 694 820 5.3E-54 T 22-04-2016 APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 Gene3D G3DSA:3.40.50.300 821 938 6.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 Gene3D G3DSA:3.40.50.300 604 672 6.3E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 Gene3D G3DSA:3.40.50.300 478 599 2.8E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 Gene3D G3DSA:3.40.50.300 2 51 2.8E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 PANTHER PTHR32282 1 941 0.0 T 22-04-2016 APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 Gene3D G3DSA:1.10.8.280 286 406 5.1E-43 T 22-04-2016 APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 Gene3D G3DSA:3.30.1490.20 130 153 1.1E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 Gene3D G3DSA:3.30.1490.20 200 249 1.1E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APT61_RS20870 fd739e985bbe669371fc7fd797c00f20 941 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 23.084 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 Gene3D G3DSA:3.30.70.20 5 56 1.2E-10 T 22-04-2016 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 Gene3D G3DSA:3.30.70.20 236 358 4.4E-77 T 22-04-2016 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 Gene3D G3DSA:3.30.70.20 437 466 4.4E-77 T 22-04-2016 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 2.0E-29 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 Gene3D G3DSA:3.30.70.20 165 195 1.7E-11 T 22-04-2016 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 PANTHER PTHR11938:SF83 1 31 1.6E-131 T 22-04-2016 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 PANTHER PTHR11938:SF83 170 467 1.6E-131 T 22-04-2016 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 PANTHER PTHR11938:SF83 134 143 1.6E-131 T 22-04-2016 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 SUPERFAMILY SSF54862 1 503 7.95E-181 T 22-04-2016 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 PANTHER PTHR11938 1 31 1.6E-131 T 22-04-2016 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 PANTHER PTHR11938 170 467 1.6E-131 T 22-04-2016 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 PANTHER PTHR11938 134 143 1.6E-131 T 22-04-2016 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 Gene3D G3DSA:3.30.70.20 196 235 1.1E-24 T 22-04-2016 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 Pfam PF13247 4Fe-4S dicluster domain 175 271 2.7E-37 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 Gene3D G3DSA:1.10.3650.10 359 435 8.3E-31 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 APT61_RS11000 919b5112fe7b1d5c1f1bb4545eecf352 514 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 493 1.2E-295 T 22-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 APT61_RS06950 e1473f228719ebf6f6c6da96d14118bf 399 PANTHER PTHR13939 2 386 5.4E-248 T 22-04-2016 APT61_RS06950 e1473f228719ebf6f6c6da96d14118bf 399 SMART SM00852 5 172 5.7E-37 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS06950 e1473f228719ebf6f6c6da96d14118bf 399 PANTHER PTHR13939:SF3 2 386 5.4E-248 T 22-04-2016 APT61_RS06950 e1473f228719ebf6f6c6da96d14118bf 399 Gene3D G3DSA:3.40.980.10 2 202 1.9E-30 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS06950 e1473f228719ebf6f6c6da96d14118bf 399 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 167 2.1E-34 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS06950 e1473f228719ebf6f6c6da96d14118bf 399 SUPERFAMILY SSF142433 249 378 2.75E-5 T 22-04-2016 IPR008136 CinA, C-terminal APT61_RS06950 e1473f228719ebf6f6c6da96d14118bf 399 SUPERFAMILY SSF53218 2 204 4.19E-37 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS06950 e1473f228719ebf6f6c6da96d14118bf 399 Pfam PF00994 Probable molybdopterin binding domain 6 170 4.9E-32 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS06950 e1473f228719ebf6f6c6da96d14118bf 399 PIRSF PIRSF006728 1 384 3.0E-111 T 22-04-2016 IPR008135 Competence-induced protein CinA APT61_RS06950 e1473f228719ebf6f6c6da96d14118bf 399 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 395 6.5E-162 T 22-04-2016 IPR008135 Competence-induced protein CinA APT61_RS06950 e1473f228719ebf6f6c6da96d14118bf 399 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 399 120.487 T 22-04-2016 IPR008135 Competence-induced protein CinA APT61_RS06835 32519a88d919eaf9de94d41d48573ec1 224 SUPERFAMILY SSF56770 42 189 1.96E-64 T 22-04-2016 APT61_RS06835 32519a88d919eaf9de94d41d48573ec1 224 PANTHER PTHR11995 2 220 7.2E-142 T 22-04-2016 APT61_RS06835 32519a88d919eaf9de94d41d48573ec1 224 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 148 164 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 APT61_RS06835 32519a88d919eaf9de94d41d48573ec1 224 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 68 174 3.5E-22 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APT61_RS06835 32519a88d919eaf9de94d41d48573ec1 224 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 45 182 1.7E-69 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 APT61_RS06835 32519a88d919eaf9de94d41d48573ec1 224 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 181 42.304 T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 APT61_RS06835 32519a88d919eaf9de94d41d48573ec1 224 Gene3D G3DSA:3.40.50.700 51 178 5.8E-32 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APT61_RS06835 32519a88d919eaf9de94d41d48573ec1 224 PANTHER PTHR11995:SF14 2 220 7.2E-142 T 22-04-2016 APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 Pfam PF00183 Hsp90 protein 211 622 8.2E-126 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 PANTHER PTHR11528:SF44 5 622 0.0 T 22-04-2016 APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 5.0E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 SUPERFAMILY SSF54211 230 485 3.72E-101 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 SUPERFAMILY SSF55874 4 213 3.67E-66 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 PANTHER PTHR11528 5 622 0.0 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 SUPERFAMILY SSF110942 510 622 2.09E-34 T 22-04-2016 APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 623 32.689 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 SMART SM00387 27 184 1.2E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 PRINTS PR00775 90kDa heat shock protein signature 120 142 4.3E-63 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 PRINTS PR00775 90kDa heat shock protein signature 93 110 4.3E-63 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 PRINTS PR00775 90kDa heat shock protein signature 75 92 4.3E-63 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 PRINTS PR00775 90kDa heat shock protein signature 190 208 4.3E-63 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 PRINTS PR00775 90kDa heat shock protein signature 5 25 4.3E-63 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 PRINTS PR00775 90kDa heat shock protein signature 26 48 4.3E-63 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 PRINTS PR00775 90kDa heat shock protein signature 172 189 4.3E-63 T 22-04-2016 IPR020575 Heat shock protein Hsp90, N-terminal APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 PIRSF PIRSF002583 1 624 1.4E-217 T 22-04-2016 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 Gene3D G3DSA:3.30.565.10 5 238 3.6E-83 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS17115 44608b32ce1d33524fd5b664a62de0c7 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 22-04-2016 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 APT61_RS14270 a1094cf1aedd5239e56460824944a3b0 312 PANTHER PTHR10996:SF114 1 310 3.4E-151 T 22-04-2016 APT61_RS14270 a1094cf1aedd5239e56460824944a3b0 312 Gene3D G3DSA:3.40.50.720 97 278 2.1E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS14270 a1094cf1aedd5239e56460824944a3b0 312 PANTHER PTHR10996 1 310 3.4E-151 T 22-04-2016 APT61_RS14270 a1094cf1aedd5239e56460824944a3b0 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 277 6.0E-42 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APT61_RS14270 a1094cf1aedd5239e56460824944a3b0 312 SUPERFAMILY SSF51735 99 278 3.87E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS14270 a1094cf1aedd5239e56460824944a3b0 312 Hamap MF_01666 Glyoxylate/hydroxypyruvate reductase A [ghrA]. 1 312 63.873 T 22-04-2016 IPR023514 Glyoxylate/hydroxypyruvate reductase A GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 APT61_RS14270 a1094cf1aedd5239e56460824944a3b0 312 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 216 232 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT61_RS18925 2e1c0a887a33cfd3d934923fff3c458d 151 Pfam PF07661 MORN repeat variant 101 120 0.098 T 22-04-2016 IPR011652 MORN variant APT61_RS18925 2e1c0a887a33cfd3d934923fff3c458d 151 Pfam PF07661 MORN repeat variant 125 145 0.024 T 22-04-2016 IPR011652 MORN variant APT61_RS18925 2e1c0a887a33cfd3d934923fff3c458d 151 Gene3D G3DSA:2.20.110.10 47 146 2.2E-7 T 22-04-2016 APT61_RS18925 2e1c0a887a33cfd3d934923fff3c458d 151 SUPERFAMILY SSF82185 50 145 7.32E-14 T 22-04-2016 APT61_RS04930 4c76af8f483d77d668f411c2b750fe1d 176 Gene3D G3DSA:1.10.10.10 18 168 1.3E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04930 4c76af8f483d77d668f411c2b750fe1d 176 SMART SM00347 46 148 2.2E-30 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS04930 4c76af8f483d77d668f411c2b750fe1d 176 Pfam PF01047 MarR family 53 112 1.4E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS04930 4c76af8f483d77d668f411c2b750fe1d 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 2.4E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS04930 4c76af8f483d77d668f411c2b750fe1d 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 2.4E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS04930 4c76af8f483d77d668f411c2b750fe1d 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 2.4E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS04930 4c76af8f483d77d668f411c2b750fe1d 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 2.4E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS04930 4c76af8f483d77d668f411c2b750fe1d 176 SUPERFAMILY SSF46785 21 166 4.18E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04930 4c76af8f483d77d668f411c2b750fe1d 176 PANTHER PTHR18964 44 176 8.1E-59 T 22-04-2016 APT61_RS04930 4c76af8f483d77d668f411c2b750fe1d 176 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site APT61_RS04930 4c76af8f483d77d668f411c2b750fe1d 176 PANTHER PTHR18964:SF141 44 176 8.1E-59 T 22-04-2016 APT61_RS15920 b83fd8fdc68724fc1b078a49f000b215 258 PIRSF PIRSF004846 1 258 6.2E-80 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 APT61_RS15920 b83fd8fdc68724fc1b078a49f000b215 258 PANTHER PTHR30632 5 254 7.6E-77 T 22-04-2016 APT61_RS15920 b83fd8fdc68724fc1b078a49f000b215 258 PANTHER PTHR30632:SF0 5 254 7.6E-77 T 22-04-2016 APT61_RS15920 b83fd8fdc68724fc1b078a49f000b215 258 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 3.4E-50 T 22-04-2016 APT61_RS15920 b83fd8fdc68724fc1b078a49f000b215 258 Gene3D G3DSA:3.40.190.10 219 255 1.1E-15 T 22-04-2016 APT61_RS15920 b83fd8fdc68724fc1b078a49f000b215 258 Gene3D G3DSA:3.40.190.10 28 109 1.1E-15 T 22-04-2016 APT61_RS15920 b83fd8fdc68724fc1b078a49f000b215 258 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 253 1.9E-83 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 APT61_RS15920 b83fd8fdc68724fc1b078a49f000b215 258 Gene3D G3DSA:3.40.190.10 110 218 1.2E-42 T 22-04-2016 APT61_RS15920 b83fd8fdc68724fc1b078a49f000b215 258 SUPERFAMILY SSF53850 28 255 2.23E-69 T 22-04-2016 APT61_RS02870 e1d5c39f8c8343c421dc088584391bd2 174 Gene3D G3DSA:3.30.1050.10 59 135 7.1E-12 T 22-04-2016 IPR003033 SCP2 sterol-binding domain APT61_RS02870 e1d5c39f8c8343c421dc088584391bd2 174 Pfam PF02036 SCP-2 sterol transfer family 44 133 3.6E-18 T 22-04-2016 IPR003033 SCP2 sterol-binding domain APT61_RS02870 e1d5c39f8c8343c421dc088584391bd2 174 SUPERFAMILY SSF55718 43 137 2.07E-21 T 22-04-2016 IPR003033 SCP2 sterol-binding domain APT61_RS02870 e1d5c39f8c8343c421dc088584391bd2 174 PIRSF PIRSF025550 1 173 5.5E-80 T 22-04-2016 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT APT61_RS02870 e1d5c39f8c8343c421dc088584391bd2 174 PANTHER PTHR10094:SF16 1 144 1.7E-74 T 22-04-2016 APT61_RS02870 e1d5c39f8c8343c421dc088584391bd2 174 PANTHER PTHR10094 1 144 1.7E-74 T 22-04-2016 APT61_RS21185 b6fe3856e2b5033119c722820cd424c4 105 Gene3D G3DSA:1.20.58.80 1 101 2.9E-37 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS21185 b6fe3856e2b5033119c722820cd424c4 105 PANTHER PTHR34382:SF2 1 101 9.2E-35 T 22-04-2016 APT61_RS21185 b6fe3856e2b5033119c722820cd424c4 105 SUPERFAMILY SSF46973 1 100 1.27E-33 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS21185 b6fe3856e2b5033119c722820cd424c4 105 PANTHER PTHR34382 1 101 9.2E-35 T 22-04-2016 APT61_RS21185 b6fe3856e2b5033119c722820cd424c4 105 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 9.7E-32 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS21185 b6fe3856e2b5033119c722820cd424c4 105 PIRSF PIRSF000699 1 104 1.2E-32 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS07225 99f4aafbb6efd84f017b64f42488b22e 489 PIRSF PIRSF006060 1 487 3.5E-80 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS07225 99f4aafbb6efd84f017b64f42488b22e 489 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APT61_RS07225 99f4aafbb6efd84f017b64f42488b22e 489 PANTHER PTHR11785 6 485 3.7E-225 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS07225 99f4aafbb6efd84f017b64f42488b22e 489 PANTHER PTHR11785:SF204 6 485 3.7E-225 T 22-04-2016 APT61_RS07225 99f4aafbb6efd84f017b64f42488b22e 489 Pfam PF00324 Amino acid permease 21 472 2.2E-144 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APT61_RS16240 e26796d08c8c4cb6b7c7ceb25886e190 148 Pfam PF01475 Ferric uptake regulator family 10 130 3.3E-47 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 APT61_RS16240 e26796d08c8c4cb6b7c7ceb25886e190 148 SUPERFAMILY SSF46785 6 134 1.69E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS16240 e26796d08c8c4cb6b7c7ceb25886e190 148 Gene3D G3DSA:1.10.10.10 3 82 1.7E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS16240 e26796d08c8c4cb6b7c7ceb25886e190 148 PANTHER PTHR33202 7 146 3.3E-46 T 22-04-2016 APT61_RS14485 0cd6062a6042d573c466fd51f2fef241 558 PANTHER PTHR10277:SF28 1 550 1.5E-281 T 22-04-2016 APT61_RS14485 0cd6062a6042d573c466fd51f2fef241 558 Pfam PF00682 HMGL-like 31 311 1.3E-74 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 APT61_RS14485 0cd6062a6042d573c466fd51f2fef241 558 Pfam PF08502 LeuA allosteric (dimerisation) domain 423 550 1.5E-19 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS14485 0cd6062a6042d573c466fd51f2fef241 558 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 38 54 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS14485 0cd6062a6042d573c466fd51f2fef241 558 Gene3D G3DSA:3.20.20.70 9 394 1.8E-146 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS14485 0cd6062a6042d573c466fd51f2fef241 558 SMART SM00917 422 550 1.4E-16 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS14485 0cd6062a6042d573c466fd51f2fef241 558 SUPERFAMILY SSF110921 445 550 2.35E-24 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS14485 0cd6062a6042d573c466fd51f2fef241 558 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 6 555 51.592 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS14485 0cd6062a6042d573c466fd51f2fef241 558 SUPERFAMILY SSF51569 20 328 9.89E-99 T 22-04-2016 APT61_RS14485 0cd6062a6042d573c466fd51f2fef241 558 SUPERFAMILY SSF89000 388 436 1.57E-12 T 22-04-2016 APT61_RS14485 0cd6062a6042d573c466fd51f2fef241 558 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 241 254 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS14485 0cd6062a6042d573c466fd51f2fef241 558 PANTHER PTHR10277 1 550 1.5E-281 T 22-04-2016 APT61_RS14485 0cd6062a6042d573c466fd51f2fef241 558 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 5 550 1.4E-235 T 22-04-2016 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS20845 8bed79479168a01bd21d77e4d277547a 108 Pfam PF12833 Helix-turn-helix domain 27 105 5.1E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS20845 8bed79479168a01bd21d77e4d277547a 108 SMART SM00342 21 104 9.6E-35 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS20845 8bed79479168a01bd21d77e4d277547a 108 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS20845 8bed79479168a01bd21d77e4d277547a 108 PANTHER PTHR11019:SF133 3 108 1.7E-77 T 22-04-2016 APT61_RS20845 8bed79479168a01bd21d77e4d277547a 108 PANTHER PTHR11019 3 108 1.7E-77 T 22-04-2016 APT61_RS20845 8bed79479168a01bd21d77e4d277547a 108 SUPERFAMILY SSF46689 57 106 7.62E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS20845 8bed79479168a01bd21d77e4d277547a 108 Gene3D G3DSA:1.10.10.60 58 106 1.5E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS20845 8bed79479168a01bd21d77e4d277547a 108 SUPERFAMILY SSF46689 4 56 3.35E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS20845 8bed79479168a01bd21d77e4d277547a 108 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.5E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS20845 8bed79479168a01bd21d77e4d277547a 108 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.5E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS20845 8bed79479168a01bd21d77e4d277547a 108 Gene3D G3DSA:1.10.10.60 1 57 7.5E-23 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS06545 91723b85cd1620540a02ee66a7e15665 900 PANTHER PTHR34403 5 897 2.4E-15 T 22-04-2016 APT61_RS20270 7d86e383ced63cf7ad7c0b0983eb11f5 251 PANTHER PTHR30363:SF4 1 251 2.5E-106 T 22-04-2016 APT61_RS20270 7d86e383ced63cf7ad7c0b0983eb11f5 251 Gene3D G3DSA:1.10.10.10 1 55 1.5E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20270 7d86e383ced63cf7ad7c0b0983eb11f5 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.0E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS20270 7d86e383ced63cf7ad7c0b0983eb11f5 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.0E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS20270 7d86e383ced63cf7ad7c0b0983eb11f5 251 SMART SM00420 6 58 3.7E-21 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS20270 7d86e383ced63cf7ad7c0b0983eb11f5 251 Gene3D G3DSA:3.40.50.1360 76 215 1.4E-4 T 22-04-2016 APT61_RS20270 7d86e383ced63cf7ad7c0b0983eb11f5 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APT61_RS20270 7d86e383ced63cf7ad7c0b0983eb11f5 251 SUPERFAMILY SSF46785 5 59 4.03E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20270 7d86e383ced63cf7ad7c0b0983eb11f5 251 SUPERFAMILY SSF100950 75 232 4.71E-23 T 22-04-2016 APT61_RS20270 7d86e383ced63cf7ad7c0b0983eb11f5 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 7.3E-37 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APT61_RS20270 7d86e383ced63cf7ad7c0b0983eb11f5 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 1.6E-19 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS20270 7d86e383ced63cf7ad7c0b0983eb11f5 251 PANTHER PTHR30363 1 251 2.5E-106 T 22-04-2016 APT61_RS20270 7d86e383ced63cf7ad7c0b0983eb11f5 251 SMART SM01134 74 232 1.5E-35 T 22-04-2016 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 Gene3D G3DSA:2.40.240.10 348 462 6.8E-50 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 SUPERFAMILY SSF52374 11 337 1.07E-102 T 22-04-2016 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 PANTHER PTHR11451 267 554 4.5E-243 T 22-04-2016 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 PANTHER PTHR11451 7 247 4.5E-243 T 22-04-2016 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 0.0 T 22-04-2016 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 8.6E-64 T 22-04-2016 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: REACT_71 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 SUPERFAMILY SSF50715 340 548 2.3E-79 T 22-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 PANTHER PTHR11451:SF29 267 554 4.5E-243 T 22-04-2016 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 PANTHER PTHR11451:SF29 7 247 4.5E-243 T 22-04-2016 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 Gene3D G3DSA:2.40.240.10 463 548 6.2E-34 T 22-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 1.7E-127 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 Gene3D G3DSA:1.10.1160.10 263 338 7.5E-39 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 Gene3D G3DSA:3.40.50.620 212 262 4.8E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 Gene3D G3DSA:3.40.50.620 27 96 4.8E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 Gene3D G3DSA:3.90.800.10 101 209 7.2E-48 T 22-04-2016 APT61_RS16255 499b73d50bcbaf62686c9afb093d0ee4 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 53.915 T 22-04-2016 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 SUPERFAMILY SSF118215 9 401 9.55E-121 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 38.994 T 22-04-2016 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 PANTHER PTHR11958:SF49 7 424 6.3E-268 T 22-04-2016 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 4.4E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 PRINTS PR00173 Glutamate-aspartate symporter signature 44 64 4.4E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 4.4E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 4.4E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 4.4E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 4.4E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 4.4E-37 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 Gene3D G3DSA:1.10.3860.10 7 406 1.1E-118 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 4.8E-114 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS01195 de5ff1157f9ac245c071074325045cee 428 PANTHER PTHR11958 7 424 6.3E-268 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS16490 aa63b62b7237653c593a6d069c090548 206 SMART SM00903 21 172 1.3E-14 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APT61_RS16490 aa63b62b7237653c593a6d069c090548 206 SUPERFAMILY SSF50475 2 189 1.64E-50 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS16490 aa63b62b7237653c593a6d069c090548 206 PANTHER PTHR33798 1 205 9.3E-86 T 22-04-2016 APT61_RS16490 aa63b62b7237653c593a6d069c090548 206 Gene3D G3DSA:2.30.110.10 10 184 4.9E-66 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS16490 aa63b62b7237653c593a6d069c090548 206 PANTHER PTHR33798:SF4 1 205 9.3E-86 T 22-04-2016 APT61_RS16490 aa63b62b7237653c593a6d069c090548 206 Pfam PF01613 Flavin reductase like domain 23 165 3.3E-18 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APT61_RS12810 4c7165935ab972d3d2b371bf62a5a9c3 242 PANTHER PTHR10992 9 236 7.3E-24 T 22-04-2016 APT61_RS12810 4c7165935ab972d3d2b371bf62a5a9c3 242 PANTHER PTHR10992:SF771 9 236 7.3E-24 T 22-04-2016 APT61_RS12810 4c7165935ab972d3d2b371bf62a5a9c3 242 Gene3D G3DSA:3.40.50.1820 9 237 3.0E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS12810 4c7165935ab972d3d2b371bf62a5a9c3 242 SUPERFAMILY SSF53474 7 235 8.04E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS12810 4c7165935ab972d3d2b371bf62a5a9c3 242 Pfam PF12697 Alpha/beta hydrolase family 46 227 1.8E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS04335 2667dd1ea95ede39b8298e73c28b9c5c 296 PANTHER PTHR30193 3 292 2.5E-153 T 22-04-2016 APT61_RS04335 2667dd1ea95ede39b8298e73c28b9c5c 296 PANTHER PTHR30193:SF1 3 292 2.5E-153 T 22-04-2016 APT61_RS04335 2667dd1ea95ede39b8298e73c28b9c5c 296 Gene3D G3DSA:1.10.3720.10 58 282 1.4E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS04335 2667dd1ea95ede39b8298e73c28b9c5c 296 SUPERFAMILY SSF161098 50 275 1.07E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS04335 2667dd1ea95ede39b8298e73c28b9c5c 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 276 1.2E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS03655 a19fca7929875a43f09f57dbadfc9a67 146 Pfam PF01476 LysM domain 96 144 6.2E-12 T 22-04-2016 IPR018392 LysM domain APT61_RS03655 a19fca7929875a43f09f57dbadfc9a67 146 Gene3D G3DSA:3.10.350.10 93 145 1.8E-12 T 22-04-2016 IPR018392 LysM domain APT61_RS03655 a19fca7929875a43f09f57dbadfc9a67 146 SMART SM00749 25 88 0.0073 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria APT61_RS03655 a19fca7929875a43f09f57dbadfc9a67 146 SUPERFAMILY SSF54106 93 144 2.75E-8 T 22-04-2016 IPR018392 LysM domain APT61_RS03655 a19fca7929875a43f09f57dbadfc9a67 146 PANTHER PTHR34700 1 146 5.7E-30 T 22-04-2016 APT61_RS03655 a19fca7929875a43f09f57dbadfc9a67 146 Gene3D G3DSA:3.30.70.100 25 68 4.4E-4 T 22-04-2016 APT61_RS03655 a19fca7929875a43f09f57dbadfc9a67 146 Pfam PF04972 BON domain 26 86 1.2E-9 T 22-04-2016 IPR007055 BON domain APT61_RS03655 a19fca7929875a43f09f57dbadfc9a67 146 SMART SM00257 95 144 6.0E-14 T 22-04-2016 IPR018392 LysM domain APT61_RS02120 30e28d43e0ce63d20b8a8b9814fb1420 179 Gene3D G3DSA:3.30.1440.10 2 179 8.6E-81 T 22-04-2016 IPR022803 Ribosomal protein L5 domain APT61_RS02120 30e28d43e0ce63d20b8a8b9814fb1420 179 Pfam PF00281 Ribosomal protein L5 24 80 1.1E-28 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal APT61_RS02120 30e28d43e0ce63d20b8a8b9814fb1420 179 SUPERFAMILY SSF55282 4 179 1.3E-79 T 22-04-2016 IPR022803 Ribosomal protein L5 domain APT61_RS02120 30e28d43e0ce63d20b8a8b9814fb1420 179 PANTHER PTHR11994 1 178 9.1E-104 T 22-04-2016 APT61_RS02120 30e28d43e0ce63d20b8a8b9814fb1420 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.917 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02120 30e28d43e0ce63d20b8a8b9814fb1420 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 22-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02120 30e28d43e0ce63d20b8a8b9814fb1420 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.9E-41 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal APT61_RS02120 30e28d43e0ce63d20b8a8b9814fb1420 179 PIRSF PIRSF002161 1 179 1.6E-67 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 APT61_RS08815 727563f4e3245393bd17bb9f75cf696a 530 Pfam PF12792 CSS motif domain associated with EAL 43 231 1.1E-32 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain APT61_RS08815 727563f4e3245393bd17bb9f75cf696a 530 SUPERFAMILY SSF141868 271 514 5.23E-71 T 22-04-2016 IPR001633 EAL domain APT61_RS08815 727563f4e3245393bd17bb9f75cf696a 530 SMART SM00052 265 506 1.0E-97 T 22-04-2016 IPR001633 EAL domain APT61_RS08815 727563f4e3245393bd17bb9f75cf696a 530 Gene3D G3DSA:3.20.20.450 270 513 3.0E-71 T 22-04-2016 IPR001633 EAL domain APT61_RS08815 727563f4e3245393bd17bb9f75cf696a 530 PANTHER PTHR33121:SF9 6 530 1.7E-199 T 22-04-2016 APT61_RS08815 727563f4e3245393bd17bb9f75cf696a 530 Pfam PF00563 EAL domain 272 501 5.0E-58 T 22-04-2016 IPR001633 EAL domain APT61_RS08815 727563f4e3245393bd17bb9f75cf696a 530 PANTHER PTHR33121 6 530 1.7E-199 T 22-04-2016 APT61_RS15575 39a5d6193cabcd728844ae8b474f01b9 299 SUPERFAMILY SSF102114 125 263 1.39E-17 T 22-04-2016 APT61_RS15575 39a5d6193cabcd728844ae8b474f01b9 299 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APT61_RS15575 39a5d6193cabcd728844ae8b474f01b9 299 PIRSF PIRSF000371 1 299 3.4E-93 T 22-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 APT61_RS15575 39a5d6193cabcd728844ae8b474f01b9 299 Gene3D G3DSA:3.30.70.20 47 99 8.0E-4 T 22-04-2016 APT61_RS15575 39a5d6193cabcd728844ae8b474f01b9 299 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 2 291 2.6E-107 T 22-04-2016 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 APT61_RS15575 39a5d6193cabcd728844ae8b474f01b9 299 PANTHER PTHR30352 100 299 3.1E-110 T 22-04-2016 APT61_RS15575 39a5d6193cabcd728844ae8b474f01b9 299 PANTHER PTHR30352 1 54 3.1E-110 T 22-04-2016 APT61_RS15575 39a5d6193cabcd728844ae8b474f01b9 299 Pfam PF13353 4Fe-4S single cluster domain 12 155 5.1E-10 T 22-04-2016 APT61_RS15575 39a5d6193cabcd728844ae8b474f01b9 299 Gene3D G3DSA:3.80.30.10 122 297 1.2E-56 T 22-04-2016 APT61_RS15575 39a5d6193cabcd728844ae8b474f01b9 299 Pfam PF04055 Radical SAM superfamily 19 229 8.9E-33 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS15575 39a5d6193cabcd728844ae8b474f01b9 299 PANTHER PTHR30352:SF4 100 299 3.1E-110 T 22-04-2016 APT61_RS15575 39a5d6193cabcd728844ae8b474f01b9 299 PANTHER PTHR30352:SF4 1 54 3.1E-110 T 22-04-2016 APT61_RS09480 356f9ebde541d6b1f4370d56d7655e94 403 Pfam PF04143 Sulphur transport 4 160 4.3E-25 T 22-04-2016 IPR007272 Sulphur transport domain APT61_RS09480 356f9ebde541d6b1f4370d56d7655e94 403 Pfam PF04143 Sulphur transport 237 386 2.0E-24 T 22-04-2016 IPR007272 Sulphur transport domain APT61_RS09480 356f9ebde541d6b1f4370d56d7655e94 403 PANTHER PTHR30574 1 344 9.2E-252 T 22-04-2016 APT61_RS09480 356f9ebde541d6b1f4370d56d7655e94 403 PANTHER PTHR30574:SF6 1 344 9.2E-252 T 22-04-2016 APT61_RS20440 cb21b2cd1db4d84f0018176da55c9272 119 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 119 26.496 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 APT61_RS20440 cb21b2cd1db4d84f0018176da55c9272 119 PIRSF PIRSF000179 1 119 5.7E-51 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 APT61_RS20440 cb21b2cd1db4d84f0018176da55c9272 119 Pfam PF02313 Fumarate reductase subunit D 6 117 1.6E-50 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 APT61_RS20440 cb21b2cd1db4d84f0018176da55c9272 119 Gene3D G3DSA:1.20.1300.10 3 119 4.1E-53 T 22-04-2016 APT61_RS20440 cb21b2cd1db4d84f0018176da55c9272 119 SUPERFAMILY SSF81343 2 118 1.96E-50 T 22-04-2016 APT61_RS20440 cb21b2cd1db4d84f0018176da55c9272 119 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 117 3.0E-54 T 22-04-2016 IPR003418 Fumarate reductase, D subunit GO:0006106|GO:0016020 APT61_RS07625 20357489cbd27700daf930aaf629ca99 288 SUPERFAMILY SSF48150 102 274 9.25E-45 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APT61_RS07625 20357489cbd27700daf930aaf629ca99 288 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 118 242 1.8E-8 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APT61_RS07625 20357489cbd27700daf930aaf629ca99 288 PANTHER PTHR10242 65 280 2.0E-91 T 22-04-2016 APT61_RS07625 20357489cbd27700daf930aaf629ca99 288 PANTHER PTHR10242 1 44 2.0E-91 T 22-04-2016 APT61_RS07625 20357489cbd27700daf930aaf629ca99 288 Gene3D G3DSA:3.30.310.20 2 112 2.1E-35 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal APT61_RS07625 20357489cbd27700daf930aaf629ca99 288 SMART SM01009 1 112 4.3E-44 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal APT61_RS07625 20357489cbd27700daf930aaf629ca99 288 Pfam PF06029 AlkA N-terminal domain 2 112 1.9E-31 T 22-04-2016 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal APT61_RS07625 20357489cbd27700daf930aaf629ca99 288 Gene3D G3DSA:1.10.1670.10 231 279 1.2E-19 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APT61_RS07625 20357489cbd27700daf930aaf629ca99 288 SMART SM00478 122 276 1.7E-20 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APT61_RS07625 20357489cbd27700daf930aaf629ca99 288 SUPERFAMILY SSF55945 1 97 2.98E-26 T 22-04-2016 APT61_RS07625 20357489cbd27700daf930aaf629ca99 288 PANTHER PTHR10242:SF3 65 280 2.0E-91 T 22-04-2016 APT61_RS07625 20357489cbd27700daf930aaf629ca99 288 PANTHER PTHR10242:SF3 1 44 2.0E-91 T 22-04-2016 APT61_RS07625 20357489cbd27700daf930aaf629ca99 288 Gene3D G3DSA:1.10.340.30 114 229 4.1E-35 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APT61_RS07625 20357489cbd27700daf930aaf629ca99 288 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 214 238 - T 22-04-2016 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 Gene3D G3DSA:1.10.287.950 278 482 2.0E-64 T 22-04-2016 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 PANTHER PTHR32089:SF48 1 513 2.7E-231 T 22-04-2016 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 SUPERFAMILY SSF47170 25 176 1.7E-35 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 PANTHER PTHR32089 1 513 2.7E-231 T 22-04-2016 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 Pfam PF00672 HAMP domain 191 258 6.6E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 322 509 1.7E-68 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 Pfam PF02203 Tar ligand binding domain homologue 1 170 7.6E-45 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 Gene3D G3DSA:1.20.120.30 36 174 5.3E-38 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 SMART SM00319 44 176 5.7E-25 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 288 310 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 SMART SM00283 263 510 2.7E-94 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 2.3E-88 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 2.3E-88 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 2.3E-88 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 2.3E-88 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 185 205 2.3E-88 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 2.3E-88 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 2.3E-88 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 SUPERFAMILY SSF58104 230 512 9.29E-76 T 22-04-2016 APT61_RS08455 21ab05a8d85871fc619b78d8e77e1272 551 SMART SM00304 210 262 7.1E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS18340 455f620bb2cf6a3025fed32ffbe38889 265 PANTHER PTHR24220 13 260 1.2E-140 T 22-04-2016 APT61_RS18340 455f620bb2cf6a3025fed32ffbe38889 265 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS18340 455f620bb2cf6a3025fed32ffbe38889 265 SMART SM00382 36 224 4.1E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS18340 455f620bb2cf6a3025fed32ffbe38889 265 Pfam PF00005 ABC transporter 27 176 1.7E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS18340 455f620bb2cf6a3025fed32ffbe38889 265 PANTHER PTHR24220:SF266 13 260 1.2E-140 T 22-04-2016 APT61_RS18340 455f620bb2cf6a3025fed32ffbe38889 265 SUPERFAMILY SSF52540 13 239 1.89E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18340 455f620bb2cf6a3025fed32ffbe38889 265 Gene3D G3DSA:3.40.50.300 3 243 6.3E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18835 8ace47e8744c93c30d90ee8a59b5e37b 569 Gene3D G3DSA:3.30.420.40 3 282 4.9E-29 T 22-04-2016 APT61_RS18835 8ace47e8744c93c30d90ee8a59b5e37b 569 SUPERFAMILY SSF53067 5 284 9.29E-22 T 22-04-2016 APT61_RS18835 8ace47e8744c93c30d90ee8a59b5e37b 569 PANTHER PTHR10196 1 558 0.0 T 22-04-2016 APT61_RS18835 8ace47e8744c93c30d90ee8a59b5e37b 569 Gene3D G3DSA:3.30.420.40 285 547 3.2E-44 T 22-04-2016 APT61_RS18835 8ace47e8744c93c30d90ee8a59b5e37b 569 Hamap MF_00520 Ribulokinase [araB]. 1 558 58.789 T 22-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 APT61_RS18835 8ace47e8744c93c30d90ee8a59b5e37b 569 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 291 501 5.3E-37 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APT61_RS18835 8ace47e8744c93c30d90ee8a59b5e37b 569 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 2 552 1.1E-264 T 22-04-2016 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16|UniPathway: UPA00145 APT61_RS18835 8ace47e8744c93c30d90ee8a59b5e37b 569 SUPERFAMILY SSF53067 285 546 2.72E-44 T 22-04-2016 APT61_RS18835 8ace47e8744c93c30d90ee8a59b5e37b 569 PANTHER PTHR10196:SF62 1 558 0.0 T 22-04-2016 APT61_RS18835 8ace47e8744c93c30d90ee8a59b5e37b 569 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 184 4.3E-6 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APT61_RS21985 d8319a701acc25808c367b49c1fe1a30 394 Gene3D G3DSA:1.20.1250.20 241 385 3.1E-5 T 22-04-2016 APT61_RS21985 d8319a701acc25808c367b49c1fe1a30 394 PANTHER PTHR23502 1 386 3.8E-230 T 22-04-2016 APT61_RS21985 d8319a701acc25808c367b49c1fe1a30 394 PANTHER PTHR23502:SF32 1 386 3.8E-230 T 22-04-2016 APT61_RS21985 d8319a701acc25808c367b49c1fe1a30 394 Gene3D G3DSA:1.20.1250.20 10 193 1.8E-31 T 22-04-2016 APT61_RS21985 d8319a701acc25808c367b49c1fe1a30 394 SUPERFAMILY SSF103473 5 386 3.01E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS21985 d8319a701acc25808c367b49c1fe1a30 394 Pfam PF07690 Major Facilitator Superfamily 14 348 2.0E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS18025 cfd089c8fa5ac96dc7794c492b7fb246 247 PANTHER PTHR30231:SF0 11 246 4.2E-148 T 22-04-2016 APT61_RS18025 cfd089c8fa5ac96dc7794c492b7fb246 247 SUPERFAMILY SSF53098 8 188 2.92E-52 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS18025 cfd089c8fa5ac96dc7794c492b7fb246 247 Gene3D G3DSA:3.30.420.10 9 188 1.2E-64 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS18025 cfd089c8fa5ac96dc7794c492b7fb246 247 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 246 1.9E-93 T 22-04-2016 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS18025 cfd089c8fa5ac96dc7794c492b7fb246 247 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 11 229 4.2E-94 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS18025 cfd089c8fa5ac96dc7794c492b7fb246 247 PANTHER PTHR30231 11 246 4.2E-148 T 22-04-2016 APT61_RS18025 cfd089c8fa5ac96dc7794c492b7fb246 247 Pfam PF00929 Exonuclease 13 179 5.4E-39 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APT61_RS18025 cfd089c8fa5ac96dc7794c492b7fb246 247 SMART SM00479 11 188 6.0E-51 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APT61_RS10775 227f1dd4cdd2465fa3de47a035137fe6 198 PANTHER PTHR30328 4 193 1.6E-39 T 22-04-2016 APT61_RS10775 227f1dd4cdd2465fa3de47a035137fe6 198 SUPERFAMILY SSF46689 3 89 2.51E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS10775 227f1dd4cdd2465fa3de47a035137fe6 198 Gene3D G3DSA:1.10.357.10 4 187 5.8E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS10775 227f1dd4cdd2465fa3de47a035137fe6 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 8.2E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS10775 227f1dd4cdd2465fa3de47a035137fe6 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 8.2E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS10775 227f1dd4cdd2465fa3de47a035137fe6 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 5.9E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS10775 227f1dd4cdd2465fa3de47a035137fe6 198 PANTHER PTHR30328:SF3 4 193 1.6E-39 T 22-04-2016 APT61_RS16710 c7a42d4476589f8aeea5acbfdb0de256 276 PANTHER PTHR11624:SF86 7 276 1.0E-79 T 22-04-2016 APT61_RS16710 c7a42d4476589f8aeea5acbfdb0de256 276 Gene3D G3DSA:3.40.50.970 3 274 3.5E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS16710 c7a42d4476589f8aeea5acbfdb0de256 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 25 268 3.1E-37 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APT61_RS16710 c7a42d4476589f8aeea5acbfdb0de256 276 PANTHER PTHR11624 7 276 1.0E-79 T 22-04-2016 IPR033247 Transketolase family APT61_RS16710 c7a42d4476589f8aeea5acbfdb0de256 276 SUPERFAMILY SSF52518 3 273 1.83E-72 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS15160 f94bc9ee0dda96f1987429141169e9e0 337 PANTHER PTHR10366 2 337 3.1E-201 T 22-04-2016 APT61_RS15160 f94bc9ee0dda96f1987429141169e9e0 337 PANTHER PTHR10366:SF409 2 337 3.1E-201 T 22-04-2016 APT61_RS15160 f94bc9ee0dda96f1987429141169e9e0 337 Gene3D G3DSA:3.40.50.720 1 248 1.3E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS15160 f94bc9ee0dda96f1987429141169e9e0 337 Gene3D G3DSA:3.90.25.10 305 333 2.1E-4 T 22-04-2016 APT61_RS15160 f94bc9ee0dda96f1987429141169e9e0 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 234 3.1E-26 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APT61_RS15160 f94bc9ee0dda96f1987429141169e9e0 337 SUPERFAMILY SSF51735 298 335 1.39E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS15160 f94bc9ee0dda96f1987429141169e9e0 337 SUPERFAMILY SSF51735 1 270 1.39E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 SUPERFAMILY SSF51126 76 360 9.42E-71 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 PANTHER PTHR32093 1 551 2.2E-91 T 22-04-2016 APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 SMART SM00912 87 207 6.3E-53 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 106 202 2.1E-23 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 790 829 3.3E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 491 525 1.2E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1920 1951 0.12 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 671 710 0.0033 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 450 481 0.85 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 533 552 0.19 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 548 587 0.016 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 711 750 6.3E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1141 1173 0.0019 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 506 546 1.4E-5 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 590 629 0.0027 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 631 669 8.7E-8 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 902 937 0.14 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1256 1293 0.011 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 735 769 5.1E-5 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 831 863 0.0078 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 751 789 0.0018 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 979 1019 0.99 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 938 976 0.1 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1590 1627 0.082 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Pfam PF05860 haemagglutination activity domain 73 206 1.2E-35 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Pfam PF04829 Pre-toxin domain with VENN motif 2572 2621 1.8E-19 T 22-04-2016 IPR006914 VENN motif-containing domain APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Pfam PF13332 Haemagluttinin repeat 1896 1999 0.0037 T 22-04-2016 IPR025157 Haemagluttinin repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Pfam PF13332 Haemagluttinin repeat 1737 1879 8.1E-11 T 22-04-2016 IPR025157 Haemagluttinin repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Pfam PF13332 Haemagluttinin repeat 2045 2220 1.1E-43 T 22-04-2016 IPR025157 Haemagluttinin repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Gene3D G3DSA:2.160.20.10 75 366 6.7E-104 T 22-04-2016 IPR012334 Pectin lyase fold APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Gene3D G3DSA:2.160.20.10 1566 1625 8.5E-4 T 22-04-2016 IPR012334 Pectin lyase fold APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 1.2E-7 T 22-04-2016 IPR024973 ESPR domain APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Pfam PF05594 Haemagluttinin repeat 254 332 1.2E-6 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Pfam PF05594 Haemagluttinin repeat 1256 1293 110.0 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Pfam PF05594 Haemagluttinin repeat 601 682 94.0 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Pfam PF05594 Haemagluttinin repeat 781 827 0.28 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Pfam PF05594 Haemagluttinin repeat 722 778 0.65 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Pfam PF05594 Haemagluttinin repeat 899 962 11.0 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Pfam PF05594 Haemagluttinin repeat 490 530 3.5 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 Pfam PF05594 Haemagluttinin repeat 1003 1070 0.14 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS05300 d6e924f384a70b911b03baaea87ef586 2910 PANTHER PTHR32093:SF41 1 551 2.2E-91 T 22-04-2016 APT61_RS07800 fc7e0e5bb1cb88f1c5edd60cf899af8f 367 Gene3D G3DSA:3.40.50.2000 204 335 1.6E-5 T 22-04-2016 APT61_RS07800 fc7e0e5bb1cb88f1c5edd60cf899af8f 367 Pfam PF00534 Glycosyl transferases group 1 190 337 2.2E-17 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APT61_RS07800 fc7e0e5bb1cb88f1c5edd60cf899af8f 367 PANTHER PTHR12526 118 363 1.1E-17 T 22-04-2016 APT61_RS07800 fc7e0e5bb1cb88f1c5edd60cf899af8f 367 SUPERFAMILY SSF53756 13 363 1.62E-32 T 22-04-2016 APT61_RS06345 30f33c2d8de065a355696e4e16a20b30 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 2.6E-31 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS06345 30f33c2d8de065a355696e4e16a20b30 85 Gene3D G3DSA:3.30.1340.10 1 83 1.8E-33 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS06345 30f33c2d8de065a355696e4e16a20b30 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 7.6E-28 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS06345 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.5E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS06345 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.5E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS06345 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.5E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS06345 30f33c2d8de065a355696e4e16a20b30 85 SUPERFAMILY SSF55594 1 82 1.44E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS06345 30f33c2d8de065a355696e4e16a20b30 85 PANTHER PTHR33705:SF1 1 84 1.8E-40 T 22-04-2016 APT61_RS06345 30f33c2d8de065a355696e4e16a20b30 85 PANTHER PTHR33705 1 84 1.8E-40 T 22-04-2016 APT61_RS06345 30f33c2d8de065a355696e4e16a20b30 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site APT61_RS06345 30f33c2d8de065a355696e4e16a20b30 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APT61_RS13225 ed97e35cd6b21f260a49bdb6c34b8a61 136 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APT61_RS13225 ed97e35cd6b21f260a49bdb6c34b8a61 136 Pfam PF00293 NUDIX domain 5 126 2.7E-20 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APT61_RS13225 ed97e35cd6b21f260a49bdb6c34b8a61 136 PRINTS PR00502 NUDIX hydrolase family signature 33 47 9.7E-7 T 22-04-2016 IPR020476 NUDIX hydrolase APT61_RS13225 ed97e35cd6b21f260a49bdb6c34b8a61 136 PRINTS PR00502 NUDIX hydrolase family signature 47 62 9.7E-7 T 22-04-2016 IPR020476 NUDIX hydrolase APT61_RS13225 ed97e35cd6b21f260a49bdb6c34b8a61 136 PANTHER PTHR22769 1 134 5.8E-37 T 22-04-2016 APT61_RS13225 ed97e35cd6b21f260a49bdb6c34b8a61 136 Gene3D G3DSA:3.90.79.10 5 126 2.2E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS13225 ed97e35cd6b21f260a49bdb6c34b8a61 136 SUPERFAMILY SSF55811 4 126 2.84E-31 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS13225 ed97e35cd6b21f260a49bdb6c34b8a61 136 PANTHER PTHR22769:SF35 1 134 5.8E-37 T 22-04-2016 APT61_RS18375 a14531b6b6e875f348a14ba04dcb063f 295 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 5 289 40.602 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 APT61_RS18375 a14531b6b6e875f348a14ba04dcb063f 295 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 4.1E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS18375 a14531b6b6e875f348a14ba04dcb063f 295 PRINTS PR00987 Glutamyl-tRNA synthetase signature 169 179 4.1E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS18375 a14531b6b6e875f348a14ba04dcb063f 295 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 193 4.1E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS18375 a14531b6b6e875f348a14ba04dcb063f 295 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 4.1E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS18375 a14531b6b6e875f348a14ba04dcb063f 295 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 4.1E-12 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS18375 a14531b6b6e875f348a14ba04dcb063f 295 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 5 269 3.6E-113 T 22-04-2016 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 APT61_RS18375 a14531b6b6e875f348a14ba04dcb063f 295 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 8 269 1.1E-43 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 APT61_RS18375 a14531b6b6e875f348a14ba04dcb063f 295 SUPERFAMILY SSF52374 5 285 1.63E-85 T 22-04-2016 APT61_RS18375 a14531b6b6e875f348a14ba04dcb063f 295 Gene3D G3DSA:3.40.50.620 5 70 1.3E-40 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS18375 a14531b6b6e875f348a14ba04dcb063f 295 Gene3D G3DSA:3.40.50.620 171 220 1.3E-40 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS18375 a14531b6b6e875f348a14ba04dcb063f 295 PANTHER PTHR11451:SF35 2 220 1.1E-120 T 22-04-2016 APT61_RS18375 a14531b6b6e875f348a14ba04dcb063f 295 PANTHER PTHR11451 2 220 1.1E-120 T 22-04-2016 APT61_RS18375 a14531b6b6e875f348a14ba04dcb063f 295 Gene3D G3DSA:3.90.800.10 71 169 7.8E-16 T 22-04-2016 APT61_RS01980 53f7bb4c8186e81ad5cc844ee533ab8b 66 Gene3D G3DSA:3.30.50.10 9 48 5.2E-4 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 APT61_RS01980 53f7bb4c8186e81ad5cc844ee533ab8b 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 60 2.2E-32 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 APT61_RS01980 53f7bb4c8186e81ad5cc844ee533ab8b 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 58 6.2E-19 T 22-04-2016 IPR012658 Conserved hypothetical protein CHP02443 APT61_RS17390 399644bf87db1457849883516dc7b65c 482 SUPERFAMILY SSF52821 402 481 2.16E-9 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS17390 399644bf87db1457849883516dc7b65c 482 SMART SM00981 75 165 3.9E-26 T 22-04-2016 IPR004114 THUMP domain GO:0003723 APT61_RS17390 399644bf87db1457849883516dc7b65c 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 1.1E-38 T 22-04-2016 IPR026340 Thiazole biosynthesis domain GO:0052837 UniPathway: UPA00060 APT61_RS17390 399644bf87db1457849883516dc7b65c 482 SUPERFAMILY SSF52402 174 372 1.35E-41 T 22-04-2016 APT61_RS17390 399644bf87db1457849883516dc7b65c 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 3.5E-80 T 22-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 APT61_RS17390 399644bf87db1457849883516dc7b65c 482 PANTHER PTHR14911 3 417 1.7E-283 T 22-04-2016 APT61_RS17390 399644bf87db1457849883516dc7b65c 482 SUPERFAMILY SSF143437 1 173 4.01E-50 T 22-04-2016 APT61_RS17390 399644bf87db1457849883516dc7b65c 482 Gene3D G3DSA:3.40.50.620 173 333 2.5E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS17390 399644bf87db1457849883516dc7b65c 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 376 2.9E-140 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 APT61_RS17390 399644bf87db1457849883516dc7b65c 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 230.414 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 APT61_RS17390 399644bf87db1457849883516dc7b65c 482 PANTHER PTHR14911:SF15 3 417 1.7E-283 T 22-04-2016 APT61_RS17390 399644bf87db1457849883516dc7b65c 482 Pfam PF02926 THUMP domain 28 161 5.4E-27 T 22-04-2016 IPR004114 THUMP domain GO:0003723 APT61_RS17390 399644bf87db1457849883516dc7b65c 482 Gene3D G3DSA:3.40.250.10 407 480 2.3E-7 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS02625 3a922d081ffe8e1f8a8e8c41af82cbef 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 41.05 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 APT61_RS02625 3a922d081ffe8e1f8a8e8c41af82cbef 284 Gene3D G3DSA:3.40.50.300 2 150 2.9E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02625 3a922d081ffe8e1f8a8e8c41af82cbef 284 PIRSF PIRSF005052 1 284 2.4E-114 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 APT61_RS02625 3a922d081ffe8e1f8a8e8c41af82cbef 284 Pfam PF03668 P-loop ATPase protein family 1 282 9.4E-147 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 APT61_RS02625 3a922d081ffe8e1f8a8e8c41af82cbef 284 PANTHER PTHR30448 1 284 5.7E-158 T 22-04-2016 APT61_RS02625 3a922d081ffe8e1f8a8e8c41af82cbef 284 SUPERFAMILY SSF52540 2 151 1.77E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02625 3a922d081ffe8e1f8a8e8c41af82cbef 284 PANTHER PTHR30448:SF0 1 284 5.7E-158 T 22-04-2016 APT61_RS00230 6545d36509e733fc2484feb4e6d41b5e 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 2.1E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS00230 6545d36509e733fc2484feb4e6d41b5e 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 2.1E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS00230 6545d36509e733fc2484feb4e6d41b5e 262 PANTHER PTHR30363 5 259 3.1E-190 T 22-04-2016 APT61_RS00230 6545d36509e733fc2484feb4e6d41b5e 262 SMART SM00420 11 63 2.1E-23 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS00230 6545d36509e733fc2484feb4e6d41b5e 262 Pfam PF00455 DeoR C terminal sensor domain 80 237 3.8E-47 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APT61_RS00230 6545d36509e733fc2484feb4e6d41b5e 262 SMART SM01134 77 238 3.7E-60 T 22-04-2016 APT61_RS00230 6545d36509e733fc2484feb4e6d41b5e 262 Gene3D G3DSA:3.30.750.70 88 155 1.9E-13 T 22-04-2016 APT61_RS00230 6545d36509e733fc2484feb4e6d41b5e 262 Gene3D G3DSA:1.10.10.10 3 87 2.6E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00230 6545d36509e733fc2484feb4e6d41b5e 262 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APT61_RS00230 6545d36509e733fc2484feb4e6d41b5e 262 PANTHER PTHR30363:SF19 5 259 3.1E-190 T 22-04-2016 APT61_RS00230 6545d36509e733fc2484feb4e6d41b5e 262 SUPERFAMILY SSF100950 80 238 2.87E-25 T 22-04-2016 APT61_RS00230 6545d36509e733fc2484feb4e6d41b5e 262 SUPERFAMILY SSF46785 9 72 1.56E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00230 6545d36509e733fc2484feb4e6d41b5e 262 Pfam PF08220 DeoR-like helix-turn-helix domain 11 66 6.7E-22 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS16370 d20e1df33c8ffc6c9e9bb4c4af08c531 241 PANTHER PTHR24220:SF317 3 240 4.6E-191 T 22-04-2016 IPR030206 Glutamate/aspartate transport ATP-binding protein GltL/AatP GO:0005524|GO:0006865|GO:0043190 APT61_RS16370 d20e1df33c8ffc6c9e9bb4c4af08c531 241 PIRSF PIRSF039085 1 241 1.5E-106 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APT61_RS16370 d20e1df33c8ffc6c9e9bb4c4af08c531 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS16370 d20e1df33c8ffc6c9e9bb4c4af08c531 241 PANTHER PTHR24220 3 240 4.6E-191 T 22-04-2016 APT61_RS16370 d20e1df33c8ffc6c9e9bb4c4af08c531 241 Pfam PF00005 ABC transporter 17 165 1.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS16370 d20e1df33c8ffc6c9e9bb4c4af08c531 241 Gene3D G3DSA:3.40.50.300 1 236 5.4E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16370 d20e1df33c8ffc6c9e9bb4c4af08c531 241 SUPERFAMILY SSF52540 1 235 2.42E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16370 d20e1df33c8ffc6c9e9bb4c4af08c531 241 SMART SM00382 26 213 1.2E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS09035 f301fde29cb0f3b8bb231fc977bab41f 164 Pfam PF01613 Flavin reductase like domain 11 158 6.5E-31 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APT61_RS09035 f301fde29cb0f3b8bb231fc977bab41f 164 SMART SM00903 11 157 6.3E-49 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APT61_RS09035 f301fde29cb0f3b8bb231fc977bab41f 164 PANTHER PTHR30466 4 159 2.0E-55 T 22-04-2016 APT61_RS09035 f301fde29cb0f3b8bb231fc977bab41f 164 Gene3D G3DSA:2.30.110.10 6 161 1.2E-51 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS09035 f301fde29cb0f3b8bb231fc977bab41f 164 SUPERFAMILY SSF50475 6 160 1.42E-46 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS09035 f301fde29cb0f3b8bb231fc977bab41f 164 PANTHER PTHR30466:SF2 4 159 2.0E-55 T 22-04-2016 APT61_RS21060 6eefe86867e7ce601b885f734c2dd5b0 140 Gene3D G3DSA:3.10.400.10 7 136 1.0E-46 T 22-04-2016 APT61_RS21060 6eefe86867e7ce601b885f734c2dd5b0 140 Pfam PF04266 ASCH domain 26 135 4.0E-22 T 22-04-2016 IPR007374 ASCH domain APT61_RS21060 6eefe86867e7ce601b885f734c2dd5b0 140 PIRSF PIRSF021320 1 137 3.5E-42 T 22-04-2016 IPR009326 Protein of unknown function DUF984 APT61_RS21060 6eefe86867e7ce601b885f734c2dd5b0 140 PANTHER PTHR39203 1 138 2.0E-47 T 22-04-2016 APT61_RS21060 6eefe86867e7ce601b885f734c2dd5b0 140 SUPERFAMILY SSF88697 4 135 1.59E-42 T 22-04-2016 IPR015947 PUA-like domain APT61_RS21060 6eefe86867e7ce601b885f734c2dd5b0 140 SMART SM01022 18 135 1.7E-34 T 22-04-2016 IPR007374 ASCH domain APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 Gene3D G3DSA:2.40.40.20 369 532 1.2E-43 T 22-04-2016 APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 Gene3D G3DSA:3.40.228.10 15 200 1.1E-74 T 22-04-2016 APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 Gene3D G3DSA:1.20.5.460 533 559 4.4E-12 T 22-04-2016 APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 PANTHER PTHR11615:SF112 1 114 1.1E-184 T 22-04-2016 APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 PANTHER PTHR11615:SF112 130 549 1.1E-184 T 22-04-2016 APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 Gene3D G3DSA:3.40.50.740 1 14 1.1E-48 T 22-04-2016 APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 Gene3D G3DSA:3.40.50.740 222 353 1.1E-48 T 22-04-2016 APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 PANTHER PTHR11615 1 114 1.1E-184 T 22-04-2016 APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 PANTHER PTHR11615 130 549 1.1E-184 T 22-04-2016 APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 Pfam PF00384 Molybdopterin oxidoreductase 1 331 1.6E-80 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 SUPERFAMILY SSF50692 409 546 4.52E-41 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 459 486 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 Pfam PF01568 Molydopterin dinucleotide binding domain 419 526 3.7E-26 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 277 294 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 1 529 1.8E-239 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 APT61_RS20765 70478f4c721761f612eb7d2d15094535 559 SUPERFAMILY SSF53706 2 407 4.19E-141 T 22-04-2016 APT61_RS16125 db95e3496121939803270b13d80b2e9d 134 PANTHER PTHR10978 8 134 1.0E-77 T 22-04-2016 APT61_RS16125 db95e3496121939803270b13d80b2e9d 134 SUPERFAMILY SSF81343 7 134 5.01E-34 T 22-04-2016 APT61_RS16125 db95e3496121939803270b13d80b2e9d 134 PANTHER PTHR10978:SF4 8 134 1.0E-77 T 22-04-2016 APT61_RS16125 db95e3496121939803270b13d80b2e9d 134 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 128 1.9E-29 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 APT61_RS16125 db95e3496121939803270b13d80b2e9d 134 Gene3D G3DSA:1.20.1300.10 8 134 9.8E-42 T 22-04-2016 APT61_RS16125 db95e3496121939803270b13d80b2e9d 134 PIRSF PIRSF000178 1 134 3.4E-31 T 22-04-2016 APT61_RS16125 db95e3496121939803270b13d80b2e9d 134 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 14 38 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 APT61_RS16125 db95e3496121939803270b13d80b2e9d 134 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 12 131 9.6E-39 T 22-04-2016 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 UniPathway: UPA00223 APT61_RS16125 db95e3496121939803270b13d80b2e9d 134 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 89 102 - T 22-04-2016 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 UniPathway: UPA00223 APT61_RS04370 d226537d0d8170fd921e2c6eec8de0b7 475 PANTHER PTHR10353:SF73 1 463 4.6E-160 T 22-04-2016 APT61_RS04370 d226537d0d8170fd921e2c6eec8de0b7 475 Pfam PF00232 Glycosyl hydrolase family 1 6 462 1.5E-100 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04370 d226537d0d8170fd921e2c6eec8de0b7 475 SUPERFAMILY SSF51445 5 460 1.16E-132 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS04370 d226537d0d8170fd921e2c6eec8de0b7 475 Gene3D G3DSA:3.20.20.80 6 465 3.7E-114 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS04370 d226537d0d8170fd921e2c6eec8de0b7 475 PANTHER PTHR10353 1 463 4.6E-160 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04370 d226537d0d8170fd921e2c6eec8de0b7 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 8.3E-10 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04370 d226537d0d8170fd921e2c6eec8de0b7 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 365 373 8.3E-10 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04370 d226537d0d8170fd921e2c6eec8de0b7 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 293 307 8.3E-10 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04370 d226537d0d8170fd921e2c6eec8de0b7 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 434 446 8.3E-10 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04370 d226537d0d8170fd921e2c6eec8de0b7 475 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 8.3E-10 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS07425 cd39e16824b06e88473c9cd5773c37fd 379 Gene3D G3DSA:3.10.560.10 244 344 4.1E-32 T 22-04-2016 APT61_RS07425 cd39e16824b06e88473c9cd5773c37fd 379 Gene3D G3DSA:1.20.5.70 345 378 1.1E-19 T 22-04-2016 APT61_RS07425 cd39e16824b06e88473c9cd5773c37fd 379 Gene3D G3DSA:3.10.560.10 164 243 1.1E-26 T 22-04-2016 APT61_RS07425 cd39e16824b06e88473c9cd5773c37fd 379 PANTHER PTHR33619:SF3 1 377 4.2E-82 T 22-04-2016 APT61_RS07425 cd39e16824b06e88473c9cd5773c37fd 379 PANTHER PTHR33619 1 377 4.2E-82 T 22-04-2016 APT61_RS07425 cd39e16824b06e88473c9cd5773c37fd 379 Pfam PF02563 Polysaccharide biosynthesis/export protein 81 164 1.8E-27 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 APT61_RS07425 cd39e16824b06e88473c9cd5773c37fd 379 Gene3D G3DSA:3.30.1950.10 88 163 6.5E-33 T 22-04-2016 APT61_RS07425 cd39e16824b06e88473c9cd5773c37fd 379 Pfam PF10531 SLBB domain 255 304 1.1E-6 T 22-04-2016 IPR019554 Soluble ligand binding domain APT61_RS07425 cd39e16824b06e88473c9cd5773c37fd 379 Pfam PF10531 SLBB domain 172 221 2.2E-6 T 22-04-2016 IPR019554 Soluble ligand binding domain APT61_RS21420 80cea6792b3b7acf9b71c49ec3bfe536 393 PANTHER PTHR32196 1 183 4.9E-164 T 22-04-2016 APT61_RS21420 80cea6792b3b7acf9b71c49ec3bfe536 393 PANTHER PTHR32196 239 392 4.9E-164 T 22-04-2016 APT61_RS21420 80cea6792b3b7acf9b71c49ec3bfe536 393 PANTHER PTHR32196:SF32 1 183 4.9E-164 T 22-04-2016 APT61_RS21420 80cea6792b3b7acf9b71c49ec3bfe536 393 PANTHER PTHR32196:SF32 239 392 4.9E-164 T 22-04-2016 APT61_RS21420 80cea6792b3b7acf9b71c49ec3bfe536 393 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 383 9.5E-47 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS03625 a6596cb21800b962a86426d691294350 630 Pfam PF00204 DNA gyrase B 218 384 4.0E-40 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 625 0.0 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PANTHER PTHR10169 1 629 0.0 T 22-04-2016 APT61_RS03625 a6596cb21800b962a86426d691294350 630 Gene3D G3DSA:3.30.565.10 15 215 3.2E-78 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS03625 a6596cb21800b962a86426d691294350 630 PANTHER PTHR10169:SF45 1 629 0.0 T 22-04-2016 APT61_RS03625 a6596cb21800b962a86426d691294350 630 SUPERFAMILY SSF56719 388 621 1.33E-76 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APT61_RS03625 a6596cb21800b962a86426d691294350 630 SUPERFAMILY SSF55874 5 215 6.31E-70 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 2.1E-157 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 2.1E-157 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 2.1E-157 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 2.1E-157 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 2.1E-157 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 2.1E-157 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 2.1E-157 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 2.1E-157 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 2.1E-157 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 2.1E-157 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 2.1E-157 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 2.1E-157 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 2.1E-157 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 2.1E-157 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 SUPERFAMILY SSF54211 217 382 8.91E-48 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS03625 a6596cb21800b962a86426d691294350 630 Gene3D G3DSA:3.30.230.10 217 390 3.4E-48 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS03625 a6596cb21800b962a86426d691294350 630 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 628 47.24 T 22-04-2016 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 3.7E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS03625 a6596cb21800b962a86426d691294350 630 SMART SM00433 34 624 7.4E-213 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 Pfam PF01751 Toprim domain 413 521 3.3E-12 T 22-04-2016 IPR006171 Toprim domain APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR00418 DNA topoisomerase II family signature 497 514 7.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR00418 DNA topoisomerase II family signature 66 79 7.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR00418 DNA topoisomerase II family signature 109 123 7.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR00418 DNA topoisomerase II family signature 31 46 7.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR00418 DNA topoisomerase II family signature 414 428 7.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR00418 DNA topoisomerase II family signature 479 495 7.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR00418 DNA topoisomerase II family signature 517 529 7.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR00418 DNA topoisomerase II family signature 560 576 7.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 PRINTS PR00418 DNA topoisomerase II family signature 266 279 7.6E-58 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 620 5.3E-25 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 SMART SM00387 27 173 9.0E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS03625 a6596cb21800b962a86426d691294350 630 Gene3D G3DSA:3.40.50.670 398 611 7.5E-76 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS03625 a6596cb21800b962a86426d691294350 630 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS14605 d4d2cc069409424e6497b7f20b70d012 156 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 134 1.1E-33 T 22-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS14605 d4d2cc069409424e6497b7f20b70d012 156 SUPERFAMILY SSF55804 1 148 5.62E-37 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APT61_RS14605 d4d2cc069409424e6497b7f20b70d012 156 PANTHER PTHR30505:SF5 1 156 8.9E-38 T 22-04-2016 APT61_RS14605 d4d2cc069409424e6497b7f20b70d012 156 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 8.2E-36 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS14605 d4d2cc069409424e6497b7f20b70d012 156 PANTHER PTHR30505 1 156 8.9E-38 T 22-04-2016 APT61_RS14605 d4d2cc069409424e6497b7f20b70d012 156 Gene3D G3DSA:3.40.930.10 1 149 3.2E-46 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS20240 2f960baf1833ec5764823911d50633d1 288 Gene3D G3DSA:3.20.20.150 4 271 3.6E-50 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS20240 2f960baf1833ec5764823911d50633d1 288 SUPERFAMILY SSF51658 21 271 1.83E-55 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS20240 2f960baf1833ec5764823911d50633d1 288 Pfam PF01261 Xylose isomerase-like TIM barrel 25 230 5.4E-33 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS20240 2f960baf1833ec5764823911d50633d1 288 PANTHER PTHR12110 1 280 8.6E-222 T 22-04-2016 APT61_RS20240 2f960baf1833ec5764823911d50633d1 288 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 4 280 3.7E-147 T 22-04-2016 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961|UniPathway: UPA00263 APT61_RS20240 2f960baf1833ec5764823911d50633d1 288 PANTHER PTHR12110:SF20 1 280 8.6E-222 T 22-04-2016 APT61_RS01930 4ed1e9f84f7d7a2118fcf4ab51b54269 99 ProDom PD015450 MALONATE DECARBOXYLASE SUBUNIT DELTA ACYL CARRIER DECARBOXYLASE PLASMID DIRECT SEQUENCING 1 94 6.0E-37 T 22-04-2016 IPR009662 Malonate decarboxylase delta subunit APT61_RS01930 4ed1e9f84f7d7a2118fcf4ab51b54269 99 Hamap MF_00710 Malonate decarboxylase acyl carrier protein [mdcC]. 1 99 40.182 T 22-04-2016 IPR009662 Malonate decarboxylase delta subunit APT61_RS01930 4ed1e9f84f7d7a2118fcf4ab51b54269 99 TIGRFAM TIGR03130 malonate_delta: malonate decarboxylase acyl carrier protein 2 94 2.5E-28 T 22-04-2016 IPR009662 Malonate decarboxylase delta subunit APT61_RS01930 4ed1e9f84f7d7a2118fcf4ab51b54269 99 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 17 94 1.1E-20 T 22-04-2016 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein APT61_RS20055 3485736770d8a5a98b999061eccf4812 340 PANTHER PTHR32196 2 340 3.3E-197 T 22-04-2016 APT61_RS20055 3485736770d8a5a98b999061eccf4812 340 PANTHER PTHR32196:SF19 2 340 3.3E-197 T 22-04-2016 APT61_RS20055 3485736770d8a5a98b999061eccf4812 340 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 320 2.9E-46 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS07485 952b57c8fc41e0a524f71c8cabcf92f0 344 SMART SM00354 9 82 1.7E-25 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS07485 952b57c8fc41e0a524f71c8cabcf92f0 344 Gene3D G3DSA:1.10.260.40 10 64 6.5E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS07485 952b57c8fc41e0a524f71c8cabcf92f0 344 PANTHER PTHR30146 9 276 7.2E-51 T 22-04-2016 APT61_RS07485 952b57c8fc41e0a524f71c8cabcf92f0 344 Gene3D G3DSA:3.40.50.2300 65 177 3.1E-27 T 22-04-2016 APT61_RS07485 952b57c8fc41e0a524f71c8cabcf92f0 344 SUPERFAMILY SSF47413 11 67 4.93E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS07485 952b57c8fc41e0a524f71c8cabcf92f0 344 Pfam PF13407 Periplasmic binding protein domain 73 280 1.5E-12 T 22-04-2016 IPR025997 Periplasmic binding protein APT61_RS07485 952b57c8fc41e0a524f71c8cabcf92f0 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 59 3.1E-15 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS07485 952b57c8fc41e0a524f71c8cabcf92f0 344 SUPERFAMILY SSF53822 70 309 1.31E-30 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS07485 952b57c8fc41e0a524f71c8cabcf92f0 344 Gene3D G3DSA:3.40.50.2300 178 336 1.4E-16 T 22-04-2016 APT61_RS04260 3942e4cc24aa7b83a2f1bff50d86f14b 291 SUPERFAMILY SSF53850 92 289 4.89E-26 T 22-04-2016 APT61_RS04260 3942e4cc24aa7b83a2f1bff50d86f14b 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04260 3942e4cc24aa7b83a2f1bff50d86f14b 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 5.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04260 3942e4cc24aa7b83a2f1bff50d86f14b 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 5.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04260 3942e4cc24aa7b83a2f1bff50d86f14b 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 5.1E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04260 3942e4cc24aa7b83a2f1bff50d86f14b 291 Gene3D G3DSA:3.40.190.10 91 187 1.5E-10 T 22-04-2016 APT61_RS04260 3942e4cc24aa7b83a2f1bff50d86f14b 291 SUPERFAMILY SSF46785 6 87 5.11E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04260 3942e4cc24aa7b83a2f1bff50d86f14b 291 PANTHER PTHR30126:SF29 3 288 3.2E-109 T 22-04-2016 APT61_RS04260 3942e4cc24aa7b83a2f1bff50d86f14b 291 Gene3D G3DSA:1.10.10.10 4 81 5.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04260 3942e4cc24aa7b83a2f1bff50d86f14b 291 Pfam PF03466 LysR substrate binding domain 89 286 5.2E-21 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS04260 3942e4cc24aa7b83a2f1bff50d86f14b 291 PANTHER PTHR30126 3 288 3.2E-109 T 22-04-2016 APT61_RS04260 3942e4cc24aa7b83a2f1bff50d86f14b 291 Gene3D G3DSA:3.40.190.10 188 252 6.0E-6 T 22-04-2016 APT61_RS01750 b4c3dcc2b0bc2e27cf749566171a7f02 292 SUPERFAMILY SSF64397 4 232 1.28E-76 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 APT61_RS01750 b4c3dcc2b0bc2e27cf749566171a7f02 292 Gene3D G3DSA:3.90.1280.10 226 283 1.2E-25 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 APT61_RS01750 b4c3dcc2b0bc2e27cf749566171a7f02 292 PIRSF PIRSF005261 1 285 2.9E-73 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APT61_RS01750 b4c3dcc2b0bc2e27cf749566171a7f02 292 Pfam PF01430 Hsp33 protein 5 273 8.6E-87 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APT61_RS01750 b4c3dcc2b0bc2e27cf749566171a7f02 292 PANTHER PTHR30111:SF1 1 288 2.3E-91 T 22-04-2016 APT61_RS01750 b4c3dcc2b0bc2e27cf749566171a7f02 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 284 34.272 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 APT61_RS01750 b4c3dcc2b0bc2e27cf749566171a7f02 292 PANTHER PTHR30111 1 288 2.3E-91 T 22-04-2016 APT61_RS01750 b4c3dcc2b0bc2e27cf749566171a7f02 292 SUPERFAMILY SSF118352 225 283 2.35E-20 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 APT61_RS01750 b4c3dcc2b0bc2e27cf749566171a7f02 292 Gene3D G3DSA:1.10.287.480 178 225 2.4E-27 T 22-04-2016 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain APT61_RS01750 b4c3dcc2b0bc2e27cf749566171a7f02 292 Gene3D G3DSA:3.55.30.10 1 176 3.3E-68 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 APT61_RS10170 eef1c86690c4b0c17523f5e7003ce771 359 SUPERFAMILY SSF111369 204 306 3.92E-12 T 22-04-2016 APT61_RS10170 eef1c86690c4b0c17523f5e7003ce771 359 Pfam PF13533 Biotin-lipoyl like 62 109 8.0E-12 T 22-04-2016 APT61_RS10170 eef1c86690c4b0c17523f5e7003ce771 359 Pfam PF13437 HlyD family secretion protein 228 346 1.3E-15 T 22-04-2016 APT61_RS10170 eef1c86690c4b0c17523f5e7003ce771 359 PANTHER PTHR30386:SF0 9 359 1.2E-88 T 22-04-2016 APT61_RS10170 eef1c86690c4b0c17523f5e7003ce771 359 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 72 92 4.5E-6 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS10170 eef1c86690c4b0c17523f5e7003ce771 359 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 343 358 4.5E-6 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS10170 eef1c86690c4b0c17523f5e7003ce771 359 Gene3D G3DSA:2.40.50.100 225 258 3.5E-20 T 22-04-2016 APT61_RS10170 eef1c86690c4b0c17523f5e7003ce771 359 Gene3D G3DSA:2.40.50.100 64 94 3.5E-20 T 22-04-2016 APT61_RS10170 eef1c86690c4b0c17523f5e7003ce771 359 SUPERFAMILY SSF111369 62 109 1.7E-10 T 22-04-2016 APT61_RS10170 eef1c86690c4b0c17523f5e7003ce771 359 SUPERFAMILY SSF111369 145 189 1.7E-10 T 22-04-2016 APT61_RS10170 eef1c86690c4b0c17523f5e7003ce771 359 PANTHER PTHR30386 9 359 1.2E-88 T 22-04-2016 APT61_RS00070 05e740bb5669eadc314934914eeffb15 296 Gene3D G3DSA:3.40.50.2300 27 144 5.5E-44 T 22-04-2016 APT61_RS00070 05e740bb5669eadc314934914eeffb15 296 PANTHER PTHR32196 13 295 1.5E-111 T 22-04-2016 APT61_RS00070 05e740bb5669eadc314934914eeffb15 296 Gene3D G3DSA:3.40.50.2300 145 295 4.9E-55 T 22-04-2016 APT61_RS00070 05e740bb5669eadc314934914eeffb15 296 SUPERFAMILY SSF53822 26 295 9.56E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS00070 05e740bb5669eadc314934914eeffb15 296 Pfam PF13407 Periplasmic binding protein domain 29 281 5.3E-59 T 22-04-2016 IPR025997 Periplasmic binding protein APT61_RS00070 05e740bb5669eadc314934914eeffb15 296 PANTHER PTHR32196:SF9 13 295 1.5E-111 T 22-04-2016 APT61_RS15140 98d1a20905846571f1f4e4938bdcb249 144 PANTHER PTHR33452 1 137 6.8E-16 T 22-04-2016 APT61_RS15140 98d1a20905846571f1f4e4938bdcb249 144 Pfam PF07681 DoxX 20 98 1.6E-18 T 22-04-2016 IPR032808 DoxX family APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 PIRSF PIRSF006485 1 466 9.0E-178 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 Gene3D G3DSA:3.40.50.300 201 383 3.4E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 Gene3D G3DSA:3.40.50.300 3 159 2.9E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 458 2.4E-177 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 SUPERFAMILY SSF52540 137 167 9.88E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 SUPERFAMILY SSF52540 200 464 9.88E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 Gene3D G3DSA:3.30.300.20 384 459 2.4E-23 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 Hamap MF_00195 GTPase Der [der]. 2 461 39.226 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 PANTHER PTHR11649 185 459 2.0E-164 T 22-04-2016 APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 PANTHER PTHR11649 1 167 2.0E-164 T 22-04-2016 APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 SUPERFAMILY SSF52540 4 168 5.95E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 378 458 4.2E-26 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.9E-27 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 Pfam PF01926 50S ribosome-binding GTPase 205 322 2.1E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 156 6.3E-21 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 202 368 2.0E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 PANTHER PTHR11649:SF5 185 459 2.0E-164 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 PANTHER PTHR11649:SF5 1 167 2.0E-164 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 1.0E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS06035 e93ebfd772197b49b8967a1052751ba1 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.0E-9 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS03195 a10f0aac3cc2a911bd632c8a552fcfc3 824 PANTHER PTHR39083 123 653 6.0E-54 T 22-04-2016 APT61_RS03195 a10f0aac3cc2a911bd632c8a552fcfc3 824 PANTHER PTHR39083 669 821 6.0E-54 T 22-04-2016 APT61_RS03195 a10f0aac3cc2a911bd632c8a552fcfc3 824 Pfam PF03170 Bacterial cellulose synthase subunit 112 720 5.4E-197 T 22-04-2016 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 UniPathway: UPA00694 APT61_RS03195 a10f0aac3cc2a911bd632c8a552fcfc3 824 PRINTS PR01440 Cellulose synthase subunit B signature 432 453 1.1E-30 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 APT61_RS03195 a10f0aac3cc2a911bd632c8a552fcfc3 824 PRINTS PR01440 Cellulose synthase subunit B signature 761 781 1.1E-30 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 APT61_RS03195 a10f0aac3cc2a911bd632c8a552fcfc3 824 PRINTS PR01440 Cellulose synthase subunit B signature 513 532 1.1E-30 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 APT61_RS03195 a10f0aac3cc2a911bd632c8a552fcfc3 824 PRINTS PR01440 Cellulose synthase subunit B signature 270 293 1.1E-30 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 APT61_RS03195 a10f0aac3cc2a911bd632c8a552fcfc3 824 PRINTS PR01440 Cellulose synthase subunit B signature 139 160 1.1E-30 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 APT61_RS03195 a10f0aac3cc2a911bd632c8a552fcfc3 824 PRINTS PR01440 Cellulose synthase subunit B signature 350 371 1.1E-30 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 APT61_RS03195 a10f0aac3cc2a911bd632c8a552fcfc3 824 PRINTS PR01440 Cellulose synthase subunit B signature 561 580 1.1E-30 T 22-04-2016 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 UniPathway: UPA00694 APT61_RS03195 a10f0aac3cc2a911bd632c8a552fcfc3 824 PANTHER PTHR39083:SF1 123 653 6.0E-54 T 22-04-2016 APT61_RS03195 a10f0aac3cc2a911bd632c8a552fcfc3 824 PANTHER PTHR39083:SF1 669 821 6.0E-54 T 22-04-2016 APT61_RS04325 875bbbb2cd8078f80550f14f4e81e403 375 PANTHER PTHR24220:SF151 5 300 8.3E-156 T 22-04-2016 APT61_RS04325 875bbbb2cd8078f80550f14f4e81e403 375 SMART SM00382 29 217 2.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS04325 875bbbb2cd8078f80550f14f4e81e403 375 Pfam PF00005 ABC transporter 21 162 3.2E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS04325 875bbbb2cd8078f80550f14f4e81e403 375 PANTHER PTHR24220 5 300 8.3E-156 T 22-04-2016 APT61_RS04325 875bbbb2cd8078f80550f14f4e81e403 375 Gene3D G3DSA:3.40.50.300 6 240 1.2E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04325 875bbbb2cd8078f80550f14f4e81e403 375 Gene3D G3DSA:2.40.50.140 293 339 9.5E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS04325 875bbbb2cd8078f80550f14f4e81e403 375 SUPERFAMILY SSF52540 6 247 2.2E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04325 875bbbb2cd8078f80550f14f4e81e403 375 Gene3D G3DSA:2.40.50.100 245 292 3.9E-11 T 22-04-2016 APT61_RS04325 875bbbb2cd8078f80550f14f4e81e403 375 Gene3D G3DSA:2.40.50.100 359 373 3.9E-11 T 22-04-2016 APT61_RS04325 875bbbb2cd8078f80550f14f4e81e403 375 SUPERFAMILY SSF50331 242 373 3.16E-21 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APT61_RS04325 875bbbb2cd8078f80550f14f4e81e403 375 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS20040 c281b9e4825c4211c04e69845c2d34b8 118 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 2.3E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS20040 c281b9e4825c4211c04e69845c2d34b8 118 PANTHER PTHR30118 3 92 4.5E-16 T 22-04-2016 APT61_RS20040 c281b9e4825c4211c04e69845c2d34b8 118 Gene3D G3DSA:1.10.10.10 9 88 5.7E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20040 c281b9e4825c4211c04e69845c2d34b8 118 SUPERFAMILY SSF46785 11 88 2.99E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS13890 799530b8c0c92d210889132219e5c931 85 PANTHER PTHR34156:SF10 2 85 7.8E-55 T 22-04-2016 APT61_RS13890 799530b8c0c92d210889132219e5c931 85 SUPERFAMILY SSF159871 3 85 5.75E-24 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS13890 799530b8c0c92d210889132219e5c931 85 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 3.1E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS13890 799530b8c0c92d210889132219e5c931 85 Gene3D G3DSA:3.30.1660.10 18 85 6.4E-25 T 22-04-2016 IPR025543 Dodecin-like APT61_RS13890 799530b8c0c92d210889132219e5c931 85 PANTHER PTHR34156 2 85 7.8E-55 T 22-04-2016 APT61_RS18470 71213df8073c08ec579ab9c34e853d13 527 Pfam PF11737 Protein of unknown function (DUF3300) 64 333 9.4E-84 T 22-04-2016 IPR021728 Protein of unknown function DUF3300 APT61_RS18470 71213df8073c08ec579ab9c34e853d13 527 PANTHER PTHR40269:SF1 1 515 2.4E-111 T 22-04-2016 APT61_RS18470 71213df8073c08ec579ab9c34e853d13 527 PANTHER PTHR40269 1 515 2.4E-111 T 22-04-2016 APT61_RS19270 d0b91ee25c15252414e8c1913e07722d 142 Gene3D G3DSA:3.30.300.20 48 140 1.6E-35 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APT61_RS19270 d0b91ee25c15252414e8c1913e07722d 142 Gene3D G3DSA:2.20.25.10 1 45 8.4E-24 T 22-04-2016 APT61_RS19270 d0b91ee25c15252414e8c1913e07722d 142 PANTHER PTHR33797:SF2 1 140 2.5E-68 T 22-04-2016 APT61_RS19270 d0b91ee25c15252414e8c1913e07722d 142 PANTHER PTHR33797 1 140 2.5E-68 T 22-04-2016 APT61_RS19270 d0b91ee25c15252414e8c1913e07722d 142 SUPERFAMILY SSF82784 1 140 1.44E-44 T 22-04-2016 IPR003718 OsmC/Ohr family APT61_RS19270 d0b91ee25c15252414e8c1913e07722d 142 Pfam PF02566 OsmC-like protein 44 138 3.1E-16 T 22-04-2016 IPR003718 OsmC/Ohr family APT61_RS19270 d0b91ee25c15252414e8c1913e07722d 142 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 7 139 7.3E-54 T 22-04-2016 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 APT61_RS11520 8fe7fe98c9a0ee30fcd3828a849a1077 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS11520 8fe7fe98c9a0ee30fcd3828a849a1077 294 PIRSF PIRSF001365 1 294 7.0E-70 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS11520 8fe7fe98c9a0ee30fcd3828a849a1077 294 PANTHER PTHR12128 1 289 2.8E-78 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS11520 8fe7fe98c9a0ee30fcd3828a849a1077 294 SMART SM01130 4 293 1.8E-93 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS11520 8fe7fe98c9a0ee30fcd3828a849a1077 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 1.2E-18 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS11520 8fe7fe98c9a0ee30fcd3828a849a1077 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 1.2E-18 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS11520 8fe7fe98c9a0ee30fcd3828a849a1077 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 1.2E-18 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS11520 8fe7fe98c9a0ee30fcd3828a849a1077 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 1.2E-18 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS11520 8fe7fe98c9a0ee30fcd3828a849a1077 294 Gene3D G3DSA:3.20.20.70 2 291 2.3E-87 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS11520 8fe7fe98c9a0ee30fcd3828a849a1077 294 SUPERFAMILY SSF51569 2 288 8.9E-76 T 22-04-2016 APT61_RS11520 8fe7fe98c9a0ee30fcd3828a849a1077 294 Pfam PF00701 Dihydrodipicolinate synthetase family 5 273 2.5E-59 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS19200 b7b47089d1aec17e57e4e1b33fa01406 137 TIGRFAM TIGR00664 DNA_III_psi: DNA polymerase III, psi subunit 2 125 6.6E-46 T 22-04-2016 IPR018382 DNA polymerase III, psi subunit, subgroup GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS19200 b7b47089d1aec17e57e4e1b33fa01406 137 SUPERFAMILY SSF102220 27 135 1.44E-31 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS19200 b7b47089d1aec17e57e4e1b33fa01406 137 Gene3D G3DSA:3.40.50.10220 26 136 1.9E-41 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS19200 b7b47089d1aec17e57e4e1b33fa01406 137 Pfam PF03603 DNA polymerase III psi subunit 3 127 3.6E-43 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS19200 b7b47089d1aec17e57e4e1b33fa01406 137 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 1.0E-29 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS19200 b7b47089d1aec17e57e4e1b33fa01406 137 PIRSF PIRSF029225 2 131 2.4E-45 T 22-04-2016 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS18475 afee5722a69d0a186d5e38424dac039e 264 Pfam PF11453 Protein of unknown function (DUF2950) 21 262 8.1E-77 T 22-04-2016 IPR021556 Protein of unknown function DUF2950 APT61_RS04000 66bc14144425b6ab3ab325ceefbe13d1 315 SUPERFAMILY SSF52440 2 122 8.92E-47 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS04000 66bc14144425b6ab3ab325ceefbe13d1 315 Gene3D G3DSA:3.30.1490.20 137 191 3.6E-32 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APT61_RS04000 66bc14144425b6ab3ab325ceefbe13d1 315 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 181.742 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APT61_RS04000 66bc14144425b6ab3ab325ceefbe13d1 315 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 1.4E-47 T 22-04-2016 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APT61_RS04000 66bc14144425b6ab3ab325ceefbe13d1 315 Gene3D G3DSA:3.40.50.20 2 129 9.1E-57 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS04000 66bc14144425b6ab3ab325ceefbe13d1 315 Gene3D G3DSA:3.30.470.20 192 298 2.1E-49 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS04000 66bc14144425b6ab3ab325ceefbe13d1 315 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 312 1.2E-140 T 22-04-2016 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APT61_RS04000 66bc14144425b6ab3ab325ceefbe13d1 315 PANTHER PTHR21621:SF4 1 315 5.7E-169 T 22-04-2016 APT61_RS04000 66bc14144425b6ab3ab325ceefbe13d1 315 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.8E-78 T 22-04-2016 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|UniPathway: UPA00142 APT61_RS04000 66bc14144425b6ab3ab325ceefbe13d1 315 SUPERFAMILY SSF56059 123 313 8.39E-61 T 22-04-2016 APT61_RS04000 66bc14144425b6ab3ab325ceefbe13d1 315 PANTHER PTHR21621 1 315 5.7E-169 T 22-04-2016 APT61_RS05635 b7ff68a7d7d6ca341ac8febb48a9546d 373 SUPERFAMILY SSF48179 241 366 9.3E-43 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS05635 b7ff68a7d7d6ca341ac8febb48a9546d 373 Gene3D G3DSA:1.20.59.10 3 83 8.4E-23 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APT61_RS05635 b7ff68a7d7d6ca341ac8febb48a9546d 373 PANTHER PTHR21363:SF0 88 370 3.8E-82 T 22-04-2016 APT61_RS05635 b7ff68a7d7d6ca341ac8febb48a9546d 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 1.1E-43 T 22-04-2016 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 APT61_RS05635 b7ff68a7d7d6ca341ac8febb48a9546d 373 SMART SM00830 9 89 2.1E-31 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APT61_RS05635 b7ff68a7d7d6ca341ac8febb48a9546d 373 SUPERFAMILY SSF51735 91 238 1.22E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05635 b7ff68a7d7d6ca341ac8febb48a9546d 373 PIRSF PIRSF001499 1 373 8.6E-183 T 22-04-2016 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626|UniPathway: UPA00120|UniPathway: UPA00122 APT61_RS05635 b7ff68a7d7d6ca341ac8febb48a9546d 373 Pfam PF02153 Prephenate dehydrogenase 136 344 1.8E-31 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 APT61_RS05635 b7ff68a7d7d6ca341ac8febb48a9546d 373 PANTHER PTHR21363 88 370 3.8E-82 T 22-04-2016 APT61_RS05635 b7ff68a7d7d6ca341ac8febb48a9546d 373 Gene3D G3DSA:3.40.50.720 84 247 1.0E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05635 b7ff68a7d7d6ca341ac8febb48a9546d 373 SUPERFAMILY SSF48600 4 88 1.65E-23 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APT61_RS05635 b7ff68a7d7d6ca341ac8febb48a9546d 373 Pfam PF01817 Chorismate mutase type II 9 86 3.4E-21 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 APT61_RS05635 b7ff68a7d7d6ca341ac8febb48a9546d 373 Gene3D G3DSA:1.10.3660.10 248 372 1.3E-57 T 22-04-2016 APT61_RS11350 7f3fcb52b24c1f38835fc4a75e5e7e5c 205 PANTHER PTHR23029:SF1 1 185 4.0E-44 T 22-04-2016 APT61_RS11350 7f3fcb52b24c1f38835fc4a75e5e7e5c 205 PANTHER PTHR23029 1 185 4.0E-44 T 22-04-2016 APT61_RS11350 7f3fcb52b24c1f38835fc4a75e5e7e5c 205 SUPERFAMILY SSF53254 1 201 4.12E-50 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APT61_RS11350 7f3fcb52b24c1f38835fc4a75e5e7e5c 205 Gene3D G3DSA:3.40.50.1240 1 201 1.4E-48 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APT61_RS11350 7f3fcb52b24c1f38835fc4a75e5e7e5c 205 SMART SM00855 2 158 2.4E-15 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APT61_RS11350 7f3fcb52b24c1f38835fc4a75e5e7e5c 205 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 196 5.6E-50 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APT61_RS08655 4fc841713ee3728dd7320be517896a84 220 PANTHER PTHR30231 4 218 1.4E-45 T 22-04-2016 APT61_RS08655 4fc841713ee3728dd7320be517896a84 220 Gene3D G3DSA:3.30.420.10 4 153 1.9E-36 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS08655 4fc841713ee3728dd7320be517896a84 220 Pfam PF00929 Exonuclease 4 147 3.6E-14 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APT61_RS08655 4fc841713ee3728dd7320be517896a84 220 SUPERFAMILY SSF53098 4 188 3.52E-32 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS08655 4fc841713ee3728dd7320be517896a84 220 SMART SM00479 1 156 3.3E-35 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APT61_RS06515 bf150e25c04eef4e72a7af56ec27c3b0 1124 Gene3D G3DSA:3.40.1190.10 117 345 6.7E-40 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS06515 bf150e25c04eef4e72a7af56ec27c3b0 1124 SMART SM00854 759 1014 2.5E-50 T 22-04-2016 IPR019079 Capsule synthesis protein, CapA APT61_RS06515 bf150e25c04eef4e72a7af56ec27c3b0 1124 SUPERFAMILY SSF56300 781 1037 1.9E-25 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS06515 bf150e25c04eef4e72a7af56ec27c3b0 1124 Gene3D G3DSA:3.40.710.10 503 687 1.5E-26 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS06515 bf150e25c04eef4e72a7af56ec27c3b0 1124 PANTHER PTHR23135:SF3 94 480 4.8E-55 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS06515 bf150e25c04eef4e72a7af56ec27c3b0 1124 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 534 675 1.3E-13 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APT61_RS06515 bf150e25c04eef4e72a7af56ec27c3b0 1124 Gene3D G3DSA:3.90.190.20 364 494 5.5E-27 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS06515 bf150e25c04eef4e72a7af56ec27c3b0 1124 SUPERFAMILY SSF53244 364 483 1.51E-24 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS06515 bf150e25c04eef4e72a7af56ec27c3b0 1124 Pfam PF08245 Mur ligase middle domain 138 329 1.8E-24 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS06515 bf150e25c04eef4e72a7af56ec27c3b0 1124 SUPERFAMILY SSF56601 496 687 3.05E-25 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS06515 bf150e25c04eef4e72a7af56ec27c3b0 1124 SUPERFAMILY SSF53623 127 346 9.42E-34 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS06515 bf150e25c04eef4e72a7af56ec27c3b0 1124 PANTHER PTHR23135 94 480 4.8E-55 T 22-04-2016 APT61_RS06515 bf150e25c04eef4e72a7af56ec27c3b0 1124 Gene3D G3DSA:3.60.21.30 781 1011 8.7E-10 T 22-04-2016 APT61_RS06515 bf150e25c04eef4e72a7af56ec27c3b0 1124 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 759 1013 6.7E-44 T 22-04-2016 IPR019079 Capsule synthesis protein, CapA APT61_RS09490 5286839e0c820b248ebb3bdd93a2c4b6 397 PANTHER PTHR10314:SF3 7 396 1.6E-226 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APT61_RS09490 5286839e0c820b248ebb3bdd93a2c4b6 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 377 2.6E-50 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS09490 5286839e0c820b248ebb3bdd93a2c4b6 397 Gene3D G3DSA:3.40.50.1100 177 392 2.4E-94 T 22-04-2016 APT61_RS09490 5286839e0c820b248ebb3bdd93a2c4b6 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 2 391 49.729 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APT61_RS09490 5286839e0c820b248ebb3bdd93a2c4b6 397 SUPERFAMILY SSF53686 5 390 4.45E-143 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS09490 5286839e0c820b248ebb3bdd93a2c4b6 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 8 389 1.9E-189 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APT61_RS09490 5286839e0c820b248ebb3bdd93a2c4b6 397 Gene3D G3DSA:3.40.50.1100 97 176 6.6E-21 T 22-04-2016 APT61_RS09490 5286839e0c820b248ebb3bdd93a2c4b6 397 PIRSF PIRSF001413 1 397 1.8E-172 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APT61_RS09490 5286839e0c820b248ebb3bdd93a2c4b6 397 PANTHER PTHR10314 7 396 1.6E-226 T 22-04-2016 APT61_RS09490 5286839e0c820b248ebb3bdd93a2c4b6 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 80 94 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APT61_RS09940 b4f1ba6ed85743d88b26606187829dd0 311 Gene3D G3DSA:3.40.50.620 23 203 9.7E-20 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS09940 b4f1ba6ed85743d88b26606187829dd0 311 PANTHER PTHR11807 1 288 2.6E-121 T 22-04-2016 APT61_RS09940 b4f1ba6ed85743d88b26606187829dd0 311 PANTHER PTHR11807:SF16 1 288 2.6E-121 T 22-04-2016 APT61_RS09940 b4f1ba6ed85743d88b26606187829dd0 311 Pfam PF01171 PP-loop family 42 203 2.2E-13 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APT61_RS09940 b4f1ba6ed85743d88b26606187829dd0 311 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 2 271 57.58 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 APT61_RS09940 b4f1ba6ed85743d88b26606187829dd0 311 SUPERFAMILY SSF52402 17 236 8.2E-54 T 22-04-2016 APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 SUPERFAMILY SSF52821 290 428 1.17E-29 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 Pfam PF00581 Rhodanese-like domain 180 263 2.1E-12 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 Pfam PF00581 Rhodanese-like domain 297 418 8.2E-11 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 ProSitePatterns PS00380 Rhodanese signature 1. 181 192 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 SUPERFAMILY SSF52821 141 274 3.54E-25 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 Gene3D G3DSA:3.40.250.10 289 428 9.5E-31 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 ProSitePatterns PS00683 Rhodanese C-terminal signature. 406 416 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 Gene3D G3DSA:3.40.250.10 140 276 2.1E-34 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 PANTHER PTHR11364:SF15 127 429 6.2E-175 T 22-04-2016 APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 PANTHER PTHR11364 127 429 6.2E-175 T 22-04-2016 APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 Gene3D G3DSA:3.40.250.10 15 129 8.2E-9 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 SUPERFAMILY SSF52821 32 127 1.27E-8 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 SMART SM00450 294 422 7.3E-15 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 SMART SM00450 146 267 1.5E-16 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS13210 96ce081cd5615748dc1f8d6dd8f3b2f6 435 SMART SM00450 26 139 0.056 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 SUPERFAMILY SSF55781 1313 1495 1.5E-19 T 22-04-2016 IPR029016 GAF domain-like APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1751 1861 2.8E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 SMART SM00065 1331 1484 1.1E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 SMART SM00220 30 287 2.9E-9 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 Pfam PF00512 His Kinase A (phospho-acceptor) domain 1641 1707 3.2E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 SUPERFAMILY SSF52540 342 391 1.38E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 SUPERFAMILY SSF52540 418 594 1.38E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 PANTHER PTHR16305 238 1379 8.8E-142 T 22-04-2016 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 Pfam PF08447 PAS fold 1525 1598 4.5E-7 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 Pfam PF13191 AAA ATPase domain 327 508 5.5E-24 T 22-04-2016 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 SMART SM00387 1751 1862 3.0E-28 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 PANTHER PTHR16305:SF31 238 1379 8.8E-142 T 22-04-2016 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1793 1807 1.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1811 1821 1.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1822 1840 1.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1846 1859 1.5E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 Gene3D G3DSA:1.10.510.10 128 284 1.4E-32 T 22-04-2016 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 SUPERFAMILY SSF55874 1706 1860 1.05E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 SUPERFAMILY SSF56112 67 288 3.51E-34 T 22-04-2016 IPR011009 Protein kinase-like domain APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 Gene3D G3DSA:3.30.450.40 1321 1482 4.9E-24 T 22-04-2016 IPR029016 GAF domain-like APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 144 156 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 Pfam PF13185 GAF domain 1331 1475 1.1E-7 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 SUPERFAMILY SSF47384 1636 1707 1.14E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 Gene3D G3DSA:3.30.450.20 1487 1628 6.3E-18 T 22-04-2016 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 Gene3D G3DSA:3.30.565.10 1712 1861 4.0E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 Pfam PF00069 Protein kinase domain 129 276 4.6E-21 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 SUPERFAMILY SSF55785 1489 1615 2.56E-13 T 22-04-2016 IPR000014 PAS domain APT61_RS19670 5f715c248f0344e0edcf91f2c1ecd830 1865 SMART SM00388 1639 1709 1.7E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS16330 ce71fe3e06ebec7693a0b1cf4916176b 476 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 442 6.5E-211 T 22-04-2016 APT61_RS16330 ce71fe3e06ebec7693a0b1cf4916176b 476 PANTHER PTHR11918 1 476 4.2E-229 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APT61_RS16330 ce71fe3e06ebec7693a0b1cf4916176b 476 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 2.9E-28 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 APT61_RS16330 ce71fe3e06ebec7693a0b1cf4916176b 476 PANTHER PTHR11918:SF43 1 476 4.2E-229 T 22-04-2016 APT61_RS16330 ce71fe3e06ebec7693a0b1cf4916176b 476 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 439 2.5E-154 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 APT61_RS16330 ce71fe3e06ebec7693a0b1cf4916176b 476 SUPERFAMILY SSF102114 130 387 9.68E-63 T 22-04-2016 APT61_RS16330 ce71fe3e06ebec7693a0b1cf4916176b 476 Gene3D G3DSA:3.80.30.20 147 381 4.4E-78 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APT61_RS16330 ce71fe3e06ebec7693a0b1cf4916176b 476 Pfam PF04055 Radical SAM superfamily 153 326 2.3E-27 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS16330 ce71fe3e06ebec7693a0b1cf4916176b 476 SMART SM00729 149 369 5.1E-61 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APT61_RS16330 ce71fe3e06ebec7693a0b1cf4916176b 476 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 442 73.369 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 APT61_RS16330 ce71fe3e06ebec7693a0b1cf4916176b 476 Pfam PF01938 TRAM domain 380 442 3.2E-18 T 22-04-2016 IPR002792 TRAM domain APT61_RS16330 ce71fe3e06ebec7693a0b1cf4916176b 476 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 153 173 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APT61_RS18105 4f9cbb855141812d683ab41db6ad97d3 188 SUPERFAMILY SSF56784 3 185 4.2E-54 T 22-04-2016 IPR023214 HAD-like domain APT61_RS18105 4f9cbb855141812d683ab41db6ad97d3 188 Gene3D G3DSA:3.40.50.1000 3 183 1.5E-65 T 22-04-2016 IPR023214 HAD-like domain APT61_RS18105 4f9cbb855141812d683ab41db6ad97d3 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 155 1.9E-39 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA APT61_RS18105 4f9cbb855141812d683ab41db6ad97d3 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 153 9.1E-41 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 APT61_RS18105 4f9cbb855141812d683ab41db6ad97d3 188 PIRSF PIRSF004682 1 188 9.8E-68 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 APT61_RS18105 4f9cbb855141812d683ab41db6ad97d3 188 PANTHER PTHR23133 6 185 5.3E-73 T 22-04-2016 APT61_RS18105 4f9cbb855141812d683ab41db6ad97d3 188 PANTHER PTHR23133:SF3 6 185 5.3E-73 T 22-04-2016 APT61_RS18105 4f9cbb855141812d683ab41db6ad97d3 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 180 2.7E-95 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 APT61_RS18105 4f9cbb855141812d683ab41db6ad97d3 188 Pfam PF13242 HAD-hyrolase-like 109 178 3.7E-12 T 22-04-2016 APT61_RS20060 dedcbb8f599a909167d2ee486e2001ae 500 SUPERFAMILY SSF52540 9 232 1.49E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20060 dedcbb8f599a909167d2ee486e2001ae 500 SUPERFAMILY SSF52540 268 488 5.04E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20060 dedcbb8f599a909167d2ee486e2001ae 500 PANTHER PTHR24220 11 385 6.9E-262 T 22-04-2016 APT61_RS20060 dedcbb8f599a909167d2ee486e2001ae 500 SMART SM00382 285 479 0.57 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS20060 dedcbb8f599a909167d2ee486e2001ae 500 SMART SM00382 34 222 5.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS20060 dedcbb8f599a909167d2ee486e2001ae 500 Pfam PF00005 ABC transporter 279 430 4.1E-18 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS20060 dedcbb8f599a909167d2ee486e2001ae 500 Pfam PF00005 ABC transporter 25 174 3.7E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS20060 dedcbb8f599a909167d2ee486e2001ae 500 PANTHER PTHR24220:SF440 11 385 6.9E-262 T 22-04-2016 APT61_RS20060 dedcbb8f599a909167d2ee486e2001ae 500 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS20060 dedcbb8f599a909167d2ee486e2001ae 500 Gene3D G3DSA:3.40.50.300 268 486 7.5E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20060 dedcbb8f599a909167d2ee486e2001ae 500 Gene3D G3DSA:3.40.50.300 7 235 4.9E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17930 64b84628075b80a0fdf12fb06563e0cc 133 Pfam PF07417 Transcriptional regulator Crl 5 122 3.7E-53 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 APT61_RS17930 64b84628075b80a0fdf12fb06563e0cc 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 32.152 T 22-04-2016 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 APT61_RS13265 3368747d0e74cd3e2cd089b1526e49eb 213 Gene3D G3DSA:3.40.50.850 2 208 6.4E-66 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS13265 3368747d0e74cd3e2cd089b1526e49eb 213 Pfam PF00857 Isochorismatase family 5 206 2.7E-35 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS13265 3368747d0e74cd3e2cd089b1526e49eb 213 PANTHER PTHR11080:SF2 5 210 2.1E-68 T 22-04-2016 APT61_RS13265 3368747d0e74cd3e2cd089b1526e49eb 213 PANTHER PTHR11080 5 210 2.1E-68 T 22-04-2016 APT61_RS13265 3368747d0e74cd3e2cd089b1526e49eb 213 SUPERFAMILY SSF52499 2 209 7.33E-53 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS09640 b87d90512522493489da2d1dde0f092b 268 Gene3D G3DSA:3.40.50.300 3 251 2.7E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09640 b87d90512522493489da2d1dde0f092b 268 PANTHER PTHR24220:SF81 7 255 1.1E-120 T 22-04-2016 APT61_RS09640 b87d90512522493489da2d1dde0f092b 268 SUPERFAMILY SSF52540 5 251 6.61E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09640 b87d90512522493489da2d1dde0f092b 268 PANTHER PTHR24220 7 255 1.1E-120 T 22-04-2016 APT61_RS09640 b87d90512522493489da2d1dde0f092b 268 SMART SM00382 39 228 1.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS09640 b87d90512522493489da2d1dde0f092b 268 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS09640 b87d90512522493489da2d1dde0f092b 268 Pfam PF00005 ABC transporter 31 178 1.1E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 TIGRFAM TIGR00131 gal_kin: galactokinase 6 382 9.3E-168 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 PIRSF PIRSF000530 1 382 2.1E-123 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 PRINTS PR00473 Galactokinase signature 92 103 5.9E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 PRINTS PR00473 Galactokinase signature 112 130 5.9E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 PRINTS PR00473 Galactokinase signature 27 45 5.9E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 PRINTS PR00473 Galactokinase signature 263 277 5.9E-30 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 Gene3D G3DSA:3.30.70.890 208 380 5.0E-60 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 Gene3D G3DSA:3.30.230.10 5 207 4.6E-78 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 PANTHER PTHR10457 8 381 8.0E-148 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 SUPERFAMILY SSF54211 3 202 1.44E-63 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 Pfam PF08544 GHMP kinases C terminal 279 361 7.6E-11 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 Pfam PF00288 GHMP kinases N terminal domain 114 181 6.1E-14 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 SUPERFAMILY SSF55060 205 380 2.72E-51 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 PANTHER PTHR10457:SF6 8 381 8.0E-148 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 PRINTS PR00959 Mevalonate kinase family signature 328 345 5.2E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 PRINTS PR00959 Mevalonate kinase family signature 25 49 5.2E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 PRINTS PR00959 Mevalonate kinase family signature 162 181 5.2E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 PRINTS PR00959 Mevalonate kinase family signature 119 141 5.2E-46 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 Pfam PF10509 Galactokinase galactose-binding signature 10 57 6.6E-22 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS15945 e403147ee62e885c940645d9cbfaaebf 382 Hamap MF_00246 Galactokinase [galK]. 25 381 45.136 T 22-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 APT61_RS10935 f7a9664635a8b49e9faf18b7b5dbd4c5 311 Gene3D G3DSA:1.10.10.10 6 84 3.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10935 f7a9664635a8b49e9faf18b7b5dbd4c5 311 PANTHER PTHR30537:SF5 1 308 1.5E-102 T 22-04-2016 APT61_RS10935 f7a9664635a8b49e9faf18b7b5dbd4c5 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 4.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10935 f7a9664635a8b49e9faf18b7b5dbd4c5 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 4.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10935 f7a9664635a8b49e9faf18b7b5dbd4c5 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 4.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10935 f7a9664635a8b49e9faf18b7b5dbd4c5 311 PANTHER PTHR30537 1 308 1.5E-102 T 22-04-2016 APT61_RS10935 f7a9664635a8b49e9faf18b7b5dbd4c5 311 Gene3D G3DSA:3.40.190.10 93 192 5.5E-30 T 22-04-2016 APT61_RS10935 f7a9664635a8b49e9faf18b7b5dbd4c5 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 7.3E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10935 f7a9664635a8b49e9faf18b7b5dbd4c5 311 Pfam PF03466 LysR substrate binding domain 90 294 5.2E-44 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS10935 f7a9664635a8b49e9faf18b7b5dbd4c5 311 SUPERFAMILY SSF53850 88 298 1.39E-48 T 22-04-2016 APT61_RS10935 f7a9664635a8b49e9faf18b7b5dbd4c5 311 SUPERFAMILY SSF46785 7 113 5.32E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 5.1E-142 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 Hamap MF_00318 Enolase [eno]. 2 416 44.006 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 SUPERFAMILY SSF51604 143 427 4.39E-128 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 PANTHER PTHR11902 1 427 3.2E-274 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 PIRSF PIRSF001400 1 430 1.3E-191 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 PRINTS PR00148 Enolase signature 339 353 3.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 PRINTS PR00148 Enolase signature 165 178 3.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 PRINTS PR00148 Enolase signature 368 385 3.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 PRINTS PR00148 Enolase signature 107 123 3.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 PRINTS PR00148 Enolase signature 37 51 3.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 PRINTS PR00148 Enolase signature 316 327 3.9E-44 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 Gene3D G3DSA:3.30.390.10 3 126 6.1E-54 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 SMART SM01193 4 134 4.8E-92 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 SUPERFAMILY SSF54826 3 138 2.43E-55 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 Gene3D G3DSA:3.20.20.120 129 429 1.1E-136 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 SMART SM01192 143 430 4.7E-214 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 2.1E-204 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 ProSitePatterns PS00164 Enolase signature. 339 352 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS04635 da5861a18337d66b93237de8f5fd59dc 431 Pfam PF03952 Enolase, N-terminal domain 4 134 1.1E-56 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 APT61_RS04740 f861c38cdcf4b76904cee8b1a830acc8 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APT61_RS04740 f861c38cdcf4b76904cee8b1a830acc8 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 5 206 2.2E-77 T 22-04-2016 APT61_RS04740 f861c38cdcf4b76904cee8b1a830acc8 208 Gene3D G3DSA:3.40.50.150 12 205 9.3E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS04740 f861c38cdcf4b76904cee8b1a830acc8 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 9.4E-94 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APT61_RS04740 f861c38cdcf4b76904cee8b1a830acc8 208 SUPERFAMILY SSF53335 11 204 2.76E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS04740 f861c38cdcf4b76904cee8b1a830acc8 208 PANTHER PTHR11579 9 203 4.8E-89 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APT61_RS04740 f861c38cdcf4b76904cee8b1a830acc8 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 38.836 T 22-04-2016 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 PANTHER PTHR22924:SF20 18 266 1.5E-78 T 22-04-2016 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 232 301 5.1E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 PRINTS PR00409 Phthalate dioxygenase reductase family signature 25 35 1.0E-36 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 PRINTS PR00409 Phthalate dioxygenase reductase family signature 106 125 1.0E-36 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 PRINTS PR00409 Phthalate dioxygenase reductase family signature 84 98 1.0E-36 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 PRINTS PR00409 Phthalate dioxygenase reductase family signature 131 140 1.0E-36 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 PRINTS PR00409 Phthalate dioxygenase reductase family signature 182 190 1.0E-36 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 PRINTS PR00409 Phthalate dioxygenase reductase family signature 35 47 1.0E-36 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 PRINTS PR00409 Phthalate dioxygenase reductase family signature 47 61 1.0E-36 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 Gene3D G3DSA:3.40.50.80 97 210 4.7E-30 T 22-04-2016 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 SUPERFAMILY SSF63380 10 94 5.11E-21 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 SUPERFAMILY SSF52343 92 217 1.83E-30 T 22-04-2016 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 Pfam PF00175 Oxidoreductase NAD-binding domain 107 196 2.2E-5 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 Gene3D G3DSA:3.10.20.30 211 308 1.3E-23 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 Gene3D G3DSA:2.40.30.10 8 94 4.9E-27 T 22-04-2016 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 PANTHER PTHR22924 18 266 1.5E-78 T 22-04-2016 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 259 267 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APT61_RS09030 ff3082df2ab694aaa20c96a278c01b19 310 SUPERFAMILY SSF54292 206 310 8.13E-25 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS04605 12aa7d23ef0c5af14793bfbbe09cb9e1 379 PIRSF PIRSF006078 1 376 3.8E-138 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APT61_RS04605 12aa7d23ef0c5af14793bfbbe09cb9e1 379 SUPERFAMILY SSF110738 1 375 1.12E-141 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APT61_RS04605 12aa7d23ef0c5af14793bfbbe09cb9e1 379 Pfam PF02595 Glycerate kinase family 3 373 9.1E-150 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APT61_RS04605 12aa7d23ef0c5af14793bfbbe09cb9e1 379 Gene3D G3DSA:3.90.1510.10 42 275 6.9E-98 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 APT61_RS04605 12aa7d23ef0c5af14793bfbbe09cb9e1 379 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 6.7E-164 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APT61_RS04605 12aa7d23ef0c5af14793bfbbe09cb9e1 379 PANTHER PTHR21599 1 377 1.6E-248 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APT61_RS04605 12aa7d23ef0c5af14793bfbbe09cb9e1 379 PANTHER PTHR21599:SF4 1 377 1.6E-248 T 22-04-2016 APT61_RS09970 06d6b39622e2a0e196c594b3b426dfa1 88 PANTHER PTHR38008 1 88 1.1E-36 T 22-04-2016 APT61_RS09970 06d6b39622e2a0e196c594b3b426dfa1 88 Pfam PF03891 Domain of unknown function (DUF333) 38 81 2.8E-15 T 22-04-2016 IPR005590 Protein of unknown function DUF333 APT61_RS09970 06d6b39622e2a0e196c594b3b426dfa1 88 PANTHER PTHR38008:SF1 1 88 1.1E-36 T 22-04-2016 APT61_RS18625 c7d113b00ad383f963ad0103a771227b 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.861 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS18625 c7d113b00ad383f963ad0103a771227b 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS18625 c7d113b00ad383f963ad0103a771227b 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 2.2E-162 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS18625 c7d113b00ad383f963ad0103a771227b 360 PANTHER PTHR22926 2 360 3.1E-195 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS18625 c7d113b00ad383f963ad0103a771227b 360 Pfam PF00953 Glycosyl transferase family 4 99 284 2.9E-34 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS18625 c7d113b00ad383f963ad0103a771227b 360 PANTHER PTHR22926:SF5 2 360 3.1E-195 T 22-04-2016 APT61_RS18625 c7d113b00ad383f963ad0103a771227b 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.0E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS18625 c7d113b00ad383f963ad0103a771227b 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 PANTHER PTHR11655:SF14 1 176 1.2E-85 T 22-04-2016 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 SUPERFAMILY SSF56053 1 82 1.02E-22 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 PANTHER PTHR11655 1 176 1.2E-85 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 Gene3D G3DSA:3.90.930.12 83 177 7.1E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 Gene3D G3DSA:3.90.930.12 2 82 3.8E-27 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 3.4E-71 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 SUPERFAMILY SSF56053 83 177 3.4E-35 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.1E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.1E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.1E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 PIRSF PIRSF002162 1 177 1.7E-42 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.155 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 Pfam PF00347 Ribosomal protein L6 90 164 3.5E-18 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS02135 38ac55c019188eda6a5d825987ad062f 177 Pfam PF00347 Ribosomal protein L6 11 82 8.8E-17 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS12210 b35be5d32824ffda2e91413d8f229148 530 PANTHER PTHR30009:SF1 12 525 0.0 T 22-04-2016 APT61_RS12210 b35be5d32824ffda2e91413d8f229148 530 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 8 525 2.0E-257 T 22-04-2016 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 APT61_RS12210 b35be5d32824ffda2e91413d8f229148 530 Pfam PF02378 Phosphotransferase system, EIIC 19 361 4.1E-84 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS12210 b35be5d32824ffda2e91413d8f229148 530 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 464 481 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS12210 b35be5d32824ffda2e91413d8f229148 530 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 70 372 3.4E-90 T 22-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 APT61_RS12210 b35be5d32824ffda2e91413d8f229148 530 Pfam PF00367 phosphotransferase system, EIIB 455 486 4.1E-16 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS12210 b35be5d32824ffda2e91413d8f229148 530 Gene3D G3DSA:3.30.1360.60 454 525 2.4E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS12210 b35be5d32824ffda2e91413d8f229148 530 PANTHER PTHR30009 12 525 0.0 T 22-04-2016 APT61_RS12210 b35be5d32824ffda2e91413d8f229148 530 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 420 511 4.4E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS12210 b35be5d32824ffda2e91413d8f229148 530 SUPERFAMILY SSF55604 454 525 1.7E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS09370 396693a46f9d2a67d726da36091b9c45 337 Pfam PF00072 Response regulator receiver domain 10 119 1.6E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS09370 396693a46f9d2a67d726da36091b9c45 337 SUPERFAMILY SSF52172 7 126 1.11E-32 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS09370 396693a46f9d2a67d726da36091b9c45 337 PANTHER PTHR26402 8 152 5.5E-98 T 22-04-2016 APT61_RS09370 396693a46f9d2a67d726da36091b9c45 337 Gene3D G3DSA:3.40.50.2300 6 124 1.4E-31 T 22-04-2016 APT61_RS09370 396693a46f9d2a67d726da36091b9c45 337 PANTHER PTHR26402:SF554 8 152 5.5E-98 T 22-04-2016 APT61_RS09370 396693a46f9d2a67d726da36091b9c45 337 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 54.578 T 22-04-2016 IPR028616 Regulator of RpoS APT61_RS09370 396693a46f9d2a67d726da36091b9c45 337 SMART SM00448 8 120 4.5E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS07970 0e2a7f983384e5dbc60d8d20fd3668e2 241 PANTHER PTHR26402 2 213 1.6E-55 T 22-04-2016 APT61_RS07970 0e2a7f983384e5dbc60d8d20fd3668e2 241 PIRSF PIRSF006171 1 230 2.1E-76 T 22-04-2016 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 APT61_RS07970 0e2a7f983384e5dbc60d8d20fd3668e2 241 PANTHER PTHR26402:SF522 2 213 1.6E-55 T 22-04-2016 APT61_RS07970 0e2a7f983384e5dbc60d8d20fd3668e2 241 SMART SM00448 2 117 2.8E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS07970 0e2a7f983384e5dbc60d8d20fd3668e2 241 Pfam PF00072 Response regulator receiver domain 4 117 7.8E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS07970 0e2a7f983384e5dbc60d8d20fd3668e2 241 SUPERFAMILY SSF52172 3 133 1.57E-29 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS07970 0e2a7f983384e5dbc60d8d20fd3668e2 241 Gene3D G3DSA:3.40.50.2300 2 130 2.1E-26 T 22-04-2016 APT61_RS09535 2eb157da5e7f071856a9ee1331ac1368 196 PIRSF PIRSF015617 1 196 4.2E-69 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APT61_RS09535 2eb157da5e7f071856a9ee1331ac1368 196 Gene3D G3DSA:3.40.50.300 2 196 2.4E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09535 2eb157da5e7f071856a9ee1331ac1368 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 7.8E-60 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APT61_RS09535 2eb157da5e7f071856a9ee1331ac1368 196 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 3 21 5.8E-7 T 22-04-2016 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APT61_RS09535 2eb157da5e7f071856a9ee1331ac1368 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 6.5E-81 T 22-04-2016 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 APT61_RS09535 2eb157da5e7f071856a9ee1331ac1368 196 PANTHER PTHR30069 5 196 1.7E-70 T 22-04-2016 APT61_RS09535 2eb157da5e7f071856a9ee1331ac1368 196 SUPERFAMILY SSF52540 7 196 1.91E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16740 5e03e3323058761c6631e7780845e2e0 308 TIGRFAM TIGR02565 cas_Csy2: CRISPR type I-F/YPEST-associated protein Csy2 4 291 5.7E-105 T 22-04-2016 IPR013398 CRISPR-associated protein Csy2 APT61_RS16740 5e03e3323058761c6631e7780845e2e0 308 Pfam PF09614 CRISPR-associated protein (Cas_Csy2) 5 291 8.0E-99 T 22-04-2016 IPR013398 CRISPR-associated protein Csy2 APT61_RS13445 8ac95bb2f9aa1e234f02a85a729e2dd0 298 PANTHER PTHR10799:SF750 7 63 1.5E-22 T 22-04-2016 APT61_RS13445 8ac95bb2f9aa1e234f02a85a729e2dd0 298 Pfam PF00990 Diguanylate cyclase, GGDEF domain 130 282 2.5E-38 T 22-04-2016 IPR000160 GGDEF domain APT61_RS13445 8ac95bb2f9aa1e234f02a85a729e2dd0 298 PANTHER PTHR10799 7 63 1.5E-22 T 22-04-2016 APT61_RS13445 8ac95bb2f9aa1e234f02a85a729e2dd0 298 PANTHER PTHR10799 160 282 1.5E-22 T 22-04-2016 APT61_RS13445 8ac95bb2f9aa1e234f02a85a729e2dd0 298 Pfam PF13682 Chemoreceptor zinc-binding domain 22 89 1.7E-4 T 22-04-2016 IPR025991 Chemoreceptor zinc-binding domain UniPathway: UPA00599 APT61_RS13445 8ac95bb2f9aa1e234f02a85a729e2dd0 298 SMART SM00267 118 287 1.2E-41 T 22-04-2016 IPR000160 GGDEF domain APT61_RS13445 8ac95bb2f9aa1e234f02a85a729e2dd0 298 SUPERFAMILY SSF55073 134 288 2.82E-37 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS13445 8ac95bb2f9aa1e234f02a85a729e2dd0 298 PANTHER PTHR10799:SF750 160 282 1.5E-22 T 22-04-2016 APT61_RS13445 8ac95bb2f9aa1e234f02a85a729e2dd0 298 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 125 285 3.5E-38 T 22-04-2016 IPR000160 GGDEF domain APT61_RS13445 8ac95bb2f9aa1e234f02a85a729e2dd0 298 Gene3D G3DSA:3.30.70.270 131 293 7.1E-44 T 22-04-2016 APT61_RS13180 f8124985f16ca33c62c120cd4289cb19 406 PANTHER PTHR11986 1 405 0.0 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS13180 f8124985f16ca33c62c120cd4289cb19 406 Pfam PF00202 Aminotransferase class-III 22 394 2.1E-125 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS13180 f8124985f16ca33c62c120cd4289cb19 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 5 400 6.6E-224 T 22-04-2016 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 APT61_RS13180 f8124985f16ca33c62c120cd4289cb19 406 Gene3D G3DSA:3.90.1150.10 287 400 1.4E-33 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS13180 f8124985f16ca33c62c120cd4289cb19 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 397 3.3E-164 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APT61_RS13180 f8124985f16ca33c62c120cd4289cb19 406 Gene3D G3DSA:3.40.640.10 57 286 3.0E-91 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS13180 f8124985f16ca33c62c120cd4289cb19 406 PANTHER PTHR11986:SF71 1 405 0.0 T 22-04-2016 APT61_RS13180 f8124985f16ca33c62c120cd4289cb19 406 SUPERFAMILY SSF53383 12 396 1.22E-126 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS13180 f8124985f16ca33c62c120cd4289cb19 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 45.212 T 22-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 APT61_RS13180 f8124985f16ca33c62c120cd4289cb19 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS17420 65f149f0154758cef01e7ba598260d73 139 Gene3D G3DSA:1.10.940.10 3 135 2.2E-45 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APT61_RS17420 65f149f0154758cef01e7ba598260d73 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 132 2.1E-45 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 APT61_RS17420 65f149f0154758cef01e7ba598260d73 139 SUPERFAMILY SSF48013 3 135 2.09E-42 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APT61_RS17420 65f149f0154758cef01e7ba598260d73 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 23.678 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 APT61_RS17420 65f149f0154758cef01e7ba598260d73 139 PANTHER PTHR11078 1 139 2.4E-56 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 APT61_RS17420 65f149f0154758cef01e7ba598260d73 139 Pfam PF01029 NusB family 7 131 2.3E-35 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 APT61_RS12890 d0c3b2e33d4fb730af03abf1ca339daa 406 Gene3D G3DSA:3.90.1150.10 285 400 1.0E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS12890 d0c3b2e33d4fb730af03abf1ca339daa 406 Hamap MF_01831 Cysteine desulfurase [sufS]. 1 406 74.261 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APT61_RS12890 d0c3b2e33d4fb730af03abf1ca339daa 406 PANTHER PTHR11601 6 401 4.4E-196 T 22-04-2016 APT61_RS12890 d0c3b2e33d4fb730af03abf1ca339daa 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APT61_RS12890 d0c3b2e33d4fb730af03abf1ca339daa 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 3.9E-185 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APT61_RS12890 d0c3b2e33d4fb730af03abf1ca339daa 406 Gene3D G3DSA:3.40.640.10 36 284 2.2E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS12890 d0c3b2e33d4fb730af03abf1ca339daa 406 Pfam PF00266 Aminotransferase class-V 26 394 5.3E-155 T 22-04-2016 IPR000192 Aminotransferase class V domain APT61_RS12890 d0c3b2e33d4fb730af03abf1ca339daa 406 PANTHER PTHR11601:SF17 6 401 4.4E-196 T 22-04-2016 APT61_RS12890 d0c3b2e33d4fb730af03abf1ca339daa 406 SUPERFAMILY SSF53383 4 401 1.55E-128 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS17330 9fadecd974fc6ac4117ccd1b375a266e 105 SUPERFAMILY SSF82657 1 89 2.62E-30 T 22-04-2016 IPR002634 BolA protein APT61_RS17330 9fadecd974fc6ac4117ccd1b375a266e 105 PANTHER PTHR12735 1 104 3.2E-68 T 22-04-2016 APT61_RS17330 9fadecd974fc6ac4117ccd1b375a266e 105 PIRSF PIRSF003113 1 100 2.3E-32 T 22-04-2016 IPR002634 BolA protein APT61_RS17330 9fadecd974fc6ac4117ccd1b375a266e 105 PANTHER PTHR12735:SF23 1 104 3.2E-68 T 22-04-2016 APT61_RS17330 9fadecd974fc6ac4117ccd1b375a266e 105 Pfam PF01722 BolA-like protein 11 84 7.0E-29 T 22-04-2016 IPR002634 BolA protein APT61_RS17330 9fadecd974fc6ac4117ccd1b375a266e 105 Gene3D G3DSA:3.30.300.90 1 101 3.8E-31 T 22-04-2016 IPR002634 BolA protein APT61_RS04340 5d3b4b6531f43201a593a38ee460ee76 107 PANTHER PTHR40112 1 107 3.4E-22 T 22-04-2016 APT61_RS04340 5d3b4b6531f43201a593a38ee460ee76 107 SUPERFAMILY SSF51182 8 100 8.37E-25 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS04340 5d3b4b6531f43201a593a38ee460ee76 107 Gene3D G3DSA:2.60.120.10 2 106 1.3E-33 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS04340 5d3b4b6531f43201a593a38ee460ee76 107 PIRSF PIRSF029883 1 107 8.8E-36 T 22-04-2016 IPR025499 Pectin degradation protein KdgF UniPathway: UPA00545 APT61_RS04340 5d3b4b6531f43201a593a38ee460ee76 107 Pfam PF07883 Cupin domain 33 90 1.2E-14 T 22-04-2016 IPR013096 Cupin 2, conserved barrel APT61_RS17315 3faff2c6459f772a3af929f8c81c7036 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.641 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APT61_RS17315 3faff2c6459f772a3af929f8c81c7036 424 SUPERFAMILY SSF57716 13 48 5.84E-12 T 22-04-2016 APT61_RS17315 3faff2c6459f772a3af929f8c81c7036 424 SUPERFAMILY SSF52540 64 402 5.58E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17315 3faff2c6459f772a3af929f8c81c7036 424 SMART SM00382 111 264 9.8E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS17315 3faff2c6459f772a3af929f8c81c7036 424 Pfam PF06689 ClpX C4-type zinc finger 13 50 3.0E-21 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APT61_RS17315 3faff2c6459f772a3af929f8c81c7036 424 PANTHER PTHR11262 10 413 4.5E-256 T 22-04-2016 APT61_RS17315 3faff2c6459f772a3af929f8c81c7036 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 9.1E-216 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 APT61_RS17315 3faff2c6459f772a3af929f8c81c7036 424 SMART SM00994 12 51 1.0E-24 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 APT61_RS17315 3faff2c6459f772a3af929f8c81c7036 424 Gene3D G3DSA:1.10.8.60 316 413 7.9E-38 T 22-04-2016 APT61_RS17315 3faff2c6459f772a3af929f8c81c7036 424 Gene3D G3DSA:3.40.50.300 294 311 2.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17315 3faff2c6459f772a3af929f8c81c7036 424 Gene3D G3DSA:3.40.50.300 66 253 2.3E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17315 3faff2c6459f772a3af929f8c81c7036 424 SMART SM01086 317 412 1.4E-35 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APT61_RS17315 3faff2c6459f772a3af929f8c81c7036 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 8.1E-18 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APT61_RS17315 3faff2c6459f772a3af929f8c81c7036 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 6.2E-49 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS06960 f3b865dca2c64083f887817698f9b851 405 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 401 44.366 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 APT61_RS06960 f3b865dca2c64083f887817698f9b851 405 Pfam PF00890 FAD binding domain 4 385 6.9E-54 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APT61_RS06960 f3b865dca2c64083f887817698f9b851 405 SUPERFAMILY SSF51905 1 57 6.49E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS06960 f3b865dca2c64083f887817698f9b851 405 SUPERFAMILY SSF51905 236 397 6.49E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS06960 f3b865dca2c64083f887817698f9b851 405 SUPERFAMILY SSF51905 121 131 6.49E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS06960 f3b865dca2c64083f887817698f9b851 405 SUPERFAMILY SSF51905 172 197 6.49E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS06960 f3b865dca2c64083f887817698f9b851 405 Gene3D G3DSA:3.50.50.60 240 402 2.1E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS06960 f3b865dca2c64083f887817698f9b851 405 Gene3D G3DSA:3.50.50.60 1 53 2.1E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS06960 f3b865dca2c64083f887817698f9b851 405 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 398 2.4E-152 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 APT61_RS06960 f3b865dca2c64083f887817698f9b851 405 PIRSF PIRSF000141 1 404 1.3E-150 T 22-04-2016 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 APT61_RS06960 f3b865dca2c64083f887817698f9b851 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 4.6E-5 T 22-04-2016 APT61_RS06960 f3b865dca2c64083f887817698f9b851 405 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 255 270 4.6E-5 T 22-04-2016 APT61_RS07925 f885f4a0986bbf6e0adff72b13d3b695 484 PANTHER PTHR21234:SF11 180 226 1.4E-136 T 22-04-2016 APT61_RS07925 f885f4a0986bbf6e0adff72b13d3b695 484 PANTHER PTHR21234:SF11 249 484 1.4E-136 T 22-04-2016 APT61_RS07925 f885f4a0986bbf6e0adff72b13d3b695 484 Hamap MF_01932 AMP nucleosidase [amn]. 3 484 60.431 T 22-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 APT61_RS07925 f885f4a0986bbf6e0adff72b13d3b695 484 Gene3D G3DSA:3.30.1730.10 3 171 5.4E-66 T 22-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 APT61_RS07925 f885f4a0986bbf6e0adff72b13d3b695 484 Gene3D G3DSA:3.40.50.1580 174 466 5.9E-118 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APT61_RS07925 f885f4a0986bbf6e0adff72b13d3b695 484 PANTHER PTHR21234 180 226 1.4E-136 T 22-04-2016 IPR018017 Nucleoside phosphorylase APT61_RS07925 f885f4a0986bbf6e0adff72b13d3b695 484 PANTHER PTHR21234 249 484 1.4E-136 T 22-04-2016 IPR018017 Nucleoside phosphorylase APT61_RS07925 f885f4a0986bbf6e0adff72b13d3b695 484 Pfam PF01048 Phosphorylase superfamily 266 431 9.9E-19 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APT61_RS07925 f885f4a0986bbf6e0adff72b13d3b695 484 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 12 167 3.4E-53 T 22-04-2016 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 APT61_RS07925 f885f4a0986bbf6e0adff72b13d3b695 484 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 11 484 8.3E-245 T 22-04-2016 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 APT61_RS07925 f885f4a0986bbf6e0adff72b13d3b695 484 SUPERFAMILY SSF53167 9 484 5.5E-160 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APT61_RS14755 2956f763f87999e2fcb84af13e2fda32 711 PANTHER PTHR30509 1 709 0.0 T 22-04-2016 APT61_RS14755 2956f763f87999e2fcb84af13e2fda32 711 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 8 705 0.0 T 22-04-2016 IPR010020 Integral membrane protein, YccS/YhfK APT61_RS14755 2956f763f87999e2fcb84af13e2fda32 711 Pfam PF13515 Fusaric acid resistance protein-like 406 525 9.1E-26 T 22-04-2016 APT61_RS14755 2956f763f87999e2fcb84af13e2fda32 711 PANTHER PTHR30509:SF8 1 709 0.0 T 22-04-2016 APT61_RS14755 2956f763f87999e2fcb84af13e2fda32 711 Pfam PF12805 FUSC-like inner membrane protein yccS 66 345 2.0E-111 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal APT61_RS14755 2956f763f87999e2fcb84af13e2fda32 711 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 8 705 0.0 T 22-04-2016 IPR010019 Integral membrane protein, YccS APT61_RS04320 ba3c1bee1c8ba026ded846df8b3d1fa6 429 Gene3D G3DSA:3.40.190.10 155 345 4.3E-22 T 22-04-2016 APT61_RS04320 ba3c1bee1c8ba026ded846df8b3d1fa6 429 Gene3D G3DSA:3.40.190.10 25 154 2.0E-18 T 22-04-2016 APT61_RS04320 ba3c1bee1c8ba026ded846df8b3d1fa6 429 PANTHER PTHR30061:SF1 1 429 5.1E-66 T 22-04-2016 APT61_RS04320 ba3c1bee1c8ba026ded846df8b3d1fa6 429 PANTHER PTHR30061 1 429 5.1E-66 T 22-04-2016 APT61_RS04320 ba3c1bee1c8ba026ded846df8b3d1fa6 429 Pfam PF01547 Bacterial extracellular solute-binding protein 46 332 7.3E-29 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 APT61_RS04320 ba3c1bee1c8ba026ded846df8b3d1fa6 429 SUPERFAMILY SSF53850 24 428 4.87E-63 T 22-04-2016 APT61_RS00610 523670fef069a6f8d3d6f27d21a1c062 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 1.0E-106 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APT61_RS00610 523670fef069a6f8d3d6f27d21a1c062 296 SUPERFAMILY SSF51730 22 294 2.94E-99 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like APT61_RS00610 523670fef069a6f8d3d6f27d21a1c062 296 Pfam PF02219 Methylenetetrahydrofolate reductase 17 291 2.7E-108 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 APT61_RS00610 523670fef069a6f8d3d6f27d21a1c062 296 Gene3D G3DSA:3.20.20.220 11 293 3.2E-111 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like APT61_RS00610 523670fef069a6f8d3d6f27d21a1c062 296 PANTHER PTHR21091 149 280 2.3E-44 T 22-04-2016 APT61_RS07275 1d0a9f247038267e0f1a2b31e0a9d1a5 241 Pfam PF02698 DUF218 domain 48 169 7.5E-18 T 22-04-2016 IPR003848 Domain of unknown function DUF218 APT61_RS07275 1d0a9f247038267e0f1a2b31e0a9d1a5 241 PANTHER PTHR30336:SF0 2 237 1.1E-118 T 22-04-2016 APT61_RS07275 1d0a9f247038267e0f1a2b31e0a9d1a5 241 PANTHER PTHR30336 2 237 1.1E-118 T 22-04-2016 APT61_RS07275 1d0a9f247038267e0f1a2b31e0a9d1a5 241 PIRSF PIRSF005011 1 240 7.5E-153 T 22-04-2016 IPR023604 Uncharacterised protein family SanA APT61_RS07275 1d0a9f247038267e0f1a2b31e0a9d1a5 241 Gene3D G3DSA:3.40.50.620 41 170 1.1E-7 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS06680 cb955e8b8ddca01bd9390d60c79f8efb 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 118 8.6E-24 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APT61_RS06680 cb955e8b8ddca01bd9390d60c79f8efb 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 317 4.1E-38 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS06680 cb955e8b8ddca01bd9390d60c79f8efb 337 SMART SM00859 6 121 2.1E-31 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APT61_RS06680 cb955e8b8ddca01bd9390d60c79f8efb 337 PANTHER PTHR10174 48 337 1.2E-53 T 22-04-2016 APT61_RS06680 cb955e8b8ddca01bd9390d60c79f8efb 337 SUPERFAMILY SSF51735 5 157 7.74E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06680 cb955e8b8ddca01bd9390d60c79f8efb 337 SUPERFAMILY SSF55347 132 319 4.26E-50 T 22-04-2016 APT61_RS06680 cb955e8b8ddca01bd9390d60c79f8efb 337 Gene3D G3DSA:3.40.50.720 1 144 7.1E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06680 cb955e8b8ddca01bd9390d60c79f8efb 337 Gene3D G3DSA:3.30.360.10 145 314 2.2E-51 T 22-04-2016 APT61_RS06680 cb955e8b8ddca01bd9390d60c79f8efb 337 PIRSF PIRSF000148 4 337 8.8E-99 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS06680 cb955e8b8ddca01bd9390d60c79f8efb 337 PANTHER PTHR10174:SF2 48 337 1.2E-53 T 22-04-2016 APT61_RS12790 d493fbd1efc9362087cfe29bb6b3b241 356 SUPERFAMILY SSF53822 66 331 2.51E-61 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS12790 d493fbd1efc9362087cfe29bb6b3b241 356 SUPERFAMILY SSF47413 8 66 9.14E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS12790 d493fbd1efc9362087cfe29bb6b3b241 356 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 55 1.0E-13 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS12790 d493fbd1efc9362087cfe29bb6b3b241 356 Gene3D G3DSA:1.10.260.40 9 67 5.3E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS12790 d493fbd1efc9362087cfe29bb6b3b241 356 SMART SM00354 8 78 9.1E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS12790 d493fbd1efc9362087cfe29bb6b3b241 356 Pfam PF13377 Periplasmic binding protein-like domain 175 333 7.8E-31 T 22-04-2016 APT61_RS12790 d493fbd1efc9362087cfe29bb6b3b241 356 Gene3D G3DSA:3.40.50.2300 68 174 7.0E-27 T 22-04-2016 APT61_RS12790 d493fbd1efc9362087cfe29bb6b3b241 356 PANTHER PTHR30146 8 337 3.3E-98 T 22-04-2016 APT61_RS12790 d493fbd1efc9362087cfe29bb6b3b241 356 Gene3D G3DSA:3.40.50.2300 175 335 6.4E-50 T 22-04-2016 APT61_RS08715 99000488acfb7036125371b49496f076 427 PANTHER PTHR30462:SF1 9 425 1.8E-246 T 22-04-2016 APT61_RS08715 99000488acfb7036125371b49496f076 427 SUPERFAMILY SSF48695 213 255 8.37E-5 T 22-04-2016 IPR011031 Multihaem cytochrome APT61_RS08715 99000488acfb7036125371b49496f076 427 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 16 417 1.3E-190 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 APT61_RS08715 99000488acfb7036125371b49496f076 427 PANTHER PTHR30462 9 425 1.8E-246 T 22-04-2016 APT61_RS08715 99000488acfb7036125371b49496f076 427 Pfam PF04403 Paraquat-inducible protein A 66 217 2.1E-38 T 22-04-2016 IPR007498 Paraquat-inducible protein A APT61_RS08715 99000488acfb7036125371b49496f076 427 Pfam PF04403 Paraquat-inducible protein A 263 418 2.8E-44 T 22-04-2016 IPR007498 Paraquat-inducible protein A APT61_RS21690 3c19b3f4dd7ddadbf1edd4f5a6098dea 404 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 3.6E-162 T 22-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 APT61_RS21690 3c19b3f4dd7ddadbf1edd4f5a6098dea 404 SUPERFAMILY SSF102645 185 399 7.98E-78 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APT61_RS21690 3c19b3f4dd7ddadbf1edd4f5a6098dea 404 Pfam PF02441 Flavoprotein 7 135 8.3E-30 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APT61_RS21690 3c19b3f4dd7ddadbf1edd4f5a6098dea 404 PANTHER PTHR14359 2 404 2.4E-204 T 22-04-2016 APT61_RS21690 3c19b3f4dd7ddadbf1edd4f5a6098dea 404 PANTHER PTHR14359:SF20 2 404 2.4E-204 T 22-04-2016 APT61_RS21690 3c19b3f4dd7ddadbf1edd4f5a6098dea 404 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 369 1.9E-73 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APT61_RS21690 3c19b3f4dd7ddadbf1edd4f5a6098dea 404 Gene3D G3DSA:3.40.50.10300 185 402 4.4E-87 T 22-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 APT61_RS21690 3c19b3f4dd7ddadbf1edd4f5a6098dea 404 Gene3D G3DSA:3.40.50.1950 3 183 9.4E-62 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APT61_RS21690 3c19b3f4dd7ddadbf1edd4f5a6098dea 404 SUPERFAMILY SSF52507 4 180 4.97E-58 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APT61_RS19975 8c14f8efc7ec4d5a0ebdd28a5166ca4b 372 SUPERFAMILY SSF53383 6 366 2.2E-33 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS19975 8c14f8efc7ec4d5a0ebdd28a5166ca4b 372 Pfam PF03841 L-seryl-tRNA selenium transferase 14 322 4.2E-14 T 22-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 APT61_RS19975 8c14f8efc7ec4d5a0ebdd28a5166ca4b 372 PANTHER PTHR32328 1 85 4.2E-218 T 22-04-2016 APT61_RS19975 8c14f8efc7ec4d5a0ebdd28a5166ca4b 372 PANTHER PTHR32328 102 371 4.2E-218 T 22-04-2016 APT61_RS19975 8c14f8efc7ec4d5a0ebdd28a5166ca4b 372 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 4 365 8.1E-184 T 22-04-2016 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 APT61_RS19975 8c14f8efc7ec4d5a0ebdd28a5166ca4b 372 Gene3D G3DSA:3.40.640.10 26 240 1.4E-26 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS19975 8c14f8efc7ec4d5a0ebdd28a5166ca4b 372 PANTHER PTHR32328:SF1 1 85 4.2E-218 T 22-04-2016 APT61_RS19975 8c14f8efc7ec4d5a0ebdd28a5166ca4b 372 PANTHER PTHR32328:SF1 102 371 4.2E-218 T 22-04-2016 APT61_RS07475 be660594de974adeb72ad09e59c3e9ee 535 PANTHER PTHR10196 9 526 1.1E-196 T 22-04-2016 APT61_RS07475 be660594de974adeb72ad09e59c3e9ee 535 Gene3D G3DSA:3.30.420.40 5 266 2.3E-73 T 22-04-2016 APT61_RS07475 be660594de974adeb72ad09e59c3e9ee 535 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 8 265 2.5E-33 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APT61_RS07475 be660594de974adeb72ad09e59c3e9ee 535 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 278 485 2.1E-48 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APT61_RS07475 be660594de974adeb72ad09e59c3e9ee 535 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 7 532 5.6E-247 T 22-04-2016 IPR006003 Carbohydrate kinase, FGGY-related GO:0005975|GO:0016773 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS07475 be660594de974adeb72ad09e59c3e9ee 535 SUPERFAMILY SSF53067 277 530 1.33E-52 T 22-04-2016 APT61_RS07475 be660594de974adeb72ad09e59c3e9ee 535 PANTHER PTHR10196:SF71 9 526 1.1E-196 T 22-04-2016 APT61_RS07475 be660594de974adeb72ad09e59c3e9ee 535 PIRSF PIRSF000538 5 535 1.2E-80 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APT61_RS07475 be660594de974adeb72ad09e59c3e9ee 535 SUPERFAMILY SSF53067 8 266 2.83E-60 T 22-04-2016 APT61_RS07475 be660594de974adeb72ad09e59c3e9ee 535 Gene3D G3DSA:3.30.420.40 277 530 7.6E-61 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PANTHER PTHR11493 419 834 0.0 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PANTHER PTHR11493 2 256 0.0 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 22-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 757 3.8E-15 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 Gene3D G3DSA:3.50.50.60 2 105 5.6E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 Gene3D G3DSA:3.30.413.10 634 768 6.6E-31 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PIRSF PIRSF037149 1 835 0.0 T 22-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 SUPERFAMILY SSF51905 144 310 5.01E-28 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 SUPERFAMILY SSF55124 502 627 6.38E-31 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 3.0E-11 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.0E-11 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 3.0E-11 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 3.0E-11 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 Gene3D G3DSA:3.50.50.60 106 309 6.6E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 1.7E-10 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 471 2.0E-14 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PANTHER PTHR11493:SF52 419 834 0.0 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PANTHER PTHR11493:SF52 2 256 0.0 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 SUPERFAMILY SSF51905 2 189 4.21E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.1E-13 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.1E-13 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.1E-13 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.1E-13 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 SUPERFAMILY SSF56014 633 808 3.14E-47 T 22-04-2016 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 7.9E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 7.9E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS01855 f256f586c09143602664d0edf8fb7bc3 847 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 285 1.8E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS22140 988dee2084b5a523aa2f667969fc6f7a 221 PANTHER PTHR18901:SF2 1 221 1.4E-58 T 22-04-2016 APT61_RS22140 988dee2084b5a523aa2f667969fc6f7a 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 7.9E-21 T 22-04-2016 IPR023214 HAD-like domain APT61_RS22140 988dee2084b5a523aa2f667969fc6f7a 221 Gene3D G3DSA:3.40.50.1000 88 213 3.8E-34 T 22-04-2016 IPR023214 HAD-like domain APT61_RS22140 988dee2084b5a523aa2f667969fc6f7a 221 Gene3D G3DSA:3.40.50.1000 2 19 3.8E-34 T 22-04-2016 IPR023214 HAD-like domain APT61_RS22140 988dee2084b5a523aa2f667969fc6f7a 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 2.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS22140 988dee2084b5a523aa2f667969fc6f7a 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 2.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS22140 988dee2084b5a523aa2f667969fc6f7a 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.2E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS22140 988dee2084b5a523aa2f667969fc6f7a 221 PANTHER PTHR18901 1 221 1.4E-58 T 22-04-2016 APT61_RS22140 988dee2084b5a523aa2f667969fc6f7a 221 Gene3D G3DSA:1.10.150.240 20 85 6.4E-6 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APT61_RS22140 988dee2084b5a523aa2f667969fc6f7a 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 183 2.7E-11 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS22140 988dee2084b5a523aa2f667969fc6f7a 221 SUPERFAMILY SSF56784 4 212 3.87E-46 T 22-04-2016 IPR023214 HAD-like domain APT61_RS05340 1cef96723c46a0624f4c1edba4bf9257 336 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 331 2.9E-45 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APT61_RS05340 1cef96723c46a0624f4c1edba4bf9257 336 PANTHER PTHR30365 1 336 9.7E-169 T 22-04-2016 APT61_RS05340 1cef96723c46a0624f4c1edba4bf9257 336 PANTHER PTHR30365:SF4 1 336 9.7E-169 T 22-04-2016 APT61_RS05340 1cef96723c46a0624f4c1edba4bf9257 336 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 325 1.5E-97 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APT61_RS09320 b459e1e64966fc8ee30569c3fd43375d 147 SMART SM00344 5 111 1.9E-28 T 22-04-2016 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 APT61_RS09320 b459e1e64966fc8ee30569c3fd43375d 147 SUPERFAMILY SSF46785 3 65 5.19E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS09320 b459e1e64966fc8ee30569c3fd43375d 147 SUPERFAMILY SSF54909 67 141 1.74E-12 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS09320 b459e1e64966fc8ee30569c3fd43375d 147 PANTHER PTHR30154:SF14 1 147 2.6E-64 T 22-04-2016 APT61_RS09320 b459e1e64966fc8ee30569c3fd43375d 147 Pfam PF01037 Lrp/AsnC ligand binding domain 72 136 3.1E-10 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT61_RS09320 b459e1e64966fc8ee30569c3fd43375d 147 PANTHER PTHR30154 1 147 2.6E-64 T 22-04-2016 APT61_RS09320 b459e1e64966fc8ee30569c3fd43375d 147 Gene3D G3DSA:3.30.70.920 58 132 2.1E-13 T 22-04-2016 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain APT61_RS09320 b459e1e64966fc8ee30569c3fd43375d 147 Gene3D G3DSA:1.10.10.10 2 56 4.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS09320 b459e1e64966fc8ee30569c3fd43375d 147 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 52 1.2E-14 T 22-04-2016 APT61_RS09320 b459e1e64966fc8ee30569c3fd43375d 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 32 51 8.8E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS09320 b459e1e64966fc8ee30569c3fd43375d 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 5 21 8.8E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS09320 b459e1e64966fc8ee30569c3fd43375d 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 21 32 8.8E-14 T 22-04-2016 IPR000485 AsnC-type HTH domain GO:0006355|GO:0043565 APT61_RS06710 abe6c7048019160af6897cc7d932bc8a 162 Pfam PF02674 Colicin V production protein 4 141 1.1E-36 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 APT61_RS06710 abe6c7048019160af6897cc7d932bc8a 162 PANTHER PTHR36926:SF1 1 162 1.4E-85 T 22-04-2016 APT61_RS06710 abe6c7048019160af6897cc7d932bc8a 162 PANTHER PTHR36926 1 162 1.4E-85 T 22-04-2016 APT61_RS00165 26eb012bc42b4cac2541700b4c7b71f5 457 Pfam PF04055 Radical SAM superfamily 57 228 7.7E-18 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS00165 26eb012bc42b4cac2541700b4c7b71f5 457 PIRSF PIRSF000167 4 454 7.5E-179 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 APT61_RS00165 26eb012bc42b4cac2541700b4c7b71f5 457 PANTHER PTHR13932:SF6 1 451 1.6E-271 T 22-04-2016 APT61_RS00165 26eb012bc42b4cac2541700b4c7b71f5 457 PANTHER PTHR13932 1 451 1.6E-271 T 22-04-2016 APT61_RS00165 26eb012bc42b4cac2541700b4c7b71f5 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 457 7.2E-235 T 22-04-2016 IPR004558 Coproporphyrinogen III oxidase, oxygen-independent, HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.99.22|UniPathway: UPA00251 APT61_RS00165 26eb012bc42b4cac2541700b4c7b71f5 457 Pfam PF06969 HemN C-terminal domain 363 431 4.6E-9 T 22-04-2016 IPR010723 HemN, C-terminal APT61_RS00165 26eb012bc42b4cac2541700b4c7b71f5 457 SMART SM00729 52 272 6.1E-57 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APT61_RS00165 26eb012bc42b4cac2541700b4c7b71f5 457 Gene3D G3DSA:3.80.30.20 53 279 2.1E-32 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APT61_RS00165 26eb012bc42b4cac2541700b4c7b71f5 457 SUPERFAMILY SSF102114 6 444 2.35E-146 T 22-04-2016 APT61_RS18325 a2fb7892d13944f466ffdc0f30f42ad5 426 Gene3D G3DSA:3.90.1150.10 2 69 6.1E-46 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS18325 a2fb7892d13944f466ffdc0f30f42ad5 426 Gene3D G3DSA:3.90.1150.10 319 425 6.1E-46 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS18325 a2fb7892d13944f466ffdc0f30f42ad5 426 Gene3D G3DSA:3.40.640.10 70 315 3.1E-83 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS18325 a2fb7892d13944f466ffdc0f30f42ad5 426 PANTHER PTHR11986:SF5 1 426 4.0E-239 T 22-04-2016 APT61_RS18325 a2fb7892d13944f466ffdc0f30f42ad5 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 107.511 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 APT61_RS18325 a2fb7892d13944f466ffdc0f30f42ad5 426 SUPERFAMILY SSF53383 2 425 1.55E-137 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS18325 a2fb7892d13944f466ffdc0f30f42ad5 426 PANTHER PTHR11986 1 426 4.0E-239 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS18325 a2fb7892d13944f466ffdc0f30f42ad5 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS18325 a2fb7892d13944f466ffdc0f30f42ad5 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 6.3E-204 T 22-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 APT61_RS18325 a2fb7892d13944f466ffdc0f30f42ad5 426 Pfam PF00202 Aminotransferase class-III 32 396 7.1E-78 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS21355 ddd0af6967b2d1d16378989894638800 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT61_RS21355 ddd0af6967b2d1d16378989894638800 324 Gene3D G3DSA:3.40.50.720 2 113 4.4E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS21355 ddd0af6967b2d1d16378989894638800 324 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 69.622 T 22-04-2016 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 APT61_RS21355 ddd0af6967b2d1d16378989894638800 324 PANTHER PTHR10996:SF118 1 321 4.6E-150 T 22-04-2016 APT61_RS21355 ddd0af6967b2d1d16378989894638800 324 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT61_RS21355 ddd0af6967b2d1d16378989894638800 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 1.2E-63 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APT61_RS21355 ddd0af6967b2d1d16378989894638800 324 Gene3D G3DSA:3.40.50.720 114 287 7.3E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS21355 ddd0af6967b2d1d16378989894638800 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 1.2E-29 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APT61_RS21355 ddd0af6967b2d1d16378989894638800 324 SUPERFAMILY SSF51735 100 288 5.6E-59 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS21355 ddd0af6967b2d1d16378989894638800 324 SUPERFAMILY SSF52283 1 134 3.21E-28 T 22-04-2016 APT61_RS21355 ddd0af6967b2d1d16378989894638800 324 PANTHER PTHR10996 1 321 4.6E-150 T 22-04-2016 APT61_RS12795 2728c8f528ab7b83d985564119e2176d 412 SUPERFAMILY SSF103473 8 392 6.02E-46 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS12795 2728c8f528ab7b83d985564119e2176d 412 Gene3D G3DSA:1.20.1250.20 206 381 4.2E-19 T 22-04-2016 APT61_RS12795 2728c8f528ab7b83d985564119e2176d 412 Pfam PF07690 Major Facilitator Superfamily 15 261 2.3E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS12795 2728c8f528ab7b83d985564119e2176d 412 Gene3D G3DSA:1.20.1250.20 7 187 4.4E-22 T 22-04-2016 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 1.1E-59 T 22-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 22-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 22-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 PANTHER PTHR18919:SF5 10 436 1.1E-196 T 22-04-2016 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 SUPERFAMILY SSF53901 15 295 7.0E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 74.161 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 PIRSF PIRSF000429 9 436 3.1E-127 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 Gene3D G3DSA:3.40.47.10 302 435 6.0E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 Gene3D G3DSA:3.40.47.10 175 220 6.0E-49 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 9.1E-267 T 22-04-2016 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0005737|GO:0006631|GO:0016042|GO:0016740|GO:0016746 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726|UniPathway: UPA00659 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 1.5E-133 T 22-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 Gene3D G3DSA:3.40.47.10 15 134 1.2E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 Gene3D G3DSA:3.40.47.10 221 299 1.2E-50 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 PANTHER PTHR18919 10 436 1.1E-196 T 22-04-2016 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 Pfam PF02803 Thiolase, C-terminal domain 297 434 1.8E-36 T 22-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 22-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 APT61_RS06605 48145dd383675e1296bee81f0db53c82 436 SUPERFAMILY SSF53901 297 434 4.49E-33 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS06350 be6faffd6600f48d8ab32ddf36ee2718 323 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 312 1.4E-136 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APT61_RS06350 be6faffd6600f48d8ab32ddf36ee2718 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 300 2.8E-68 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS06350 be6faffd6600f48d8ab32ddf36ee2718 323 PANTHER PTHR10314 3 318 9.2E-160 T 22-04-2016 APT61_RS06350 be6faffd6600f48d8ab32ddf36ee2718 323 PANTHER PTHR10314:SF110 3 318 9.2E-160 T 22-04-2016 APT61_RS06350 be6faffd6600f48d8ab32ddf36ee2718 323 Gene3D G3DSA:3.40.50.1100 131 314 2.9E-72 T 22-04-2016 APT61_RS06350 be6faffd6600f48d8ab32ddf36ee2718 323 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 22-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 APT61_RS06350 be6faffd6600f48d8ab32ddf36ee2718 323 SUPERFAMILY SSF53686 3 317 1.57E-97 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS06350 be6faffd6600f48d8ab32ddf36ee2718 323 Gene3D G3DSA:3.40.50.1100 36 130 2.4E-38 T 22-04-2016 APT61_RS06350 be6faffd6600f48d8ab32ddf36ee2718 323 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 312 6.4E-145 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 APT61_RS20615 3448304e67788c1fb16ede07fe676f1e 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 332 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS20615 3448304e67788c1fb16ede07fe676f1e 500 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 33 432 5.3E-145 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 APT61_RS20615 3448304e67788c1fb16ede07fe676f1e 500 Gene3D G3DSA:1.20.1250.20 24 230 3.9E-23 T 22-04-2016 APT61_RS20615 3448304e67788c1fb16ede07fe676f1e 500 Gene3D G3DSA:1.20.1250.20 252 453 1.3E-28 T 22-04-2016 APT61_RS20615 3448304e67788c1fb16ede07fe676f1e 500 SUPERFAMILY SSF103473 24 440 1.31E-69 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS20615 3448304e67788c1fb16ede07fe676f1e 500 Pfam PF08946 Osmosensory transporter coiled coil 454 499 1.1E-22 T 22-04-2016 IPR015041 Osmosensory transporter coiled coil APT61_RS20615 3448304e67788c1fb16ede07fe676f1e 500 Pfam PF00083 Sugar (and other) transporter 28 448 9.5E-71 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APT61_RS20615 3448304e67788c1fb16ede07fe676f1e 500 PANTHER PTHR23508 1 462 5.9E-277 T 22-04-2016 APT61_RS20615 3448304e67788c1fb16ede07fe676f1e 500 PANTHER PTHR23508:SF17 1 462 5.9E-277 T 22-04-2016 APT61_RS20615 3448304e67788c1fb16ede07fe676f1e 500 Gene3D G3DSA:1.10.1660.10 454 492 9.9E-4 T 22-04-2016 APT61_RS20615 3448304e67788c1fb16ede07fe676f1e 500 SUPERFAMILY SSF103661 465 497 8.89E-13 T 22-04-2016 APT61_RS11035 79891580e98f13895d8367f54725de3e 385 PANTHER PTHR30483 1 374 8.9E-86 T 22-04-2016 APT61_RS11035 79891580e98f13895d8367f54725de3e 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 338 353 5.77E-8 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS11035 79891580e98f13895d8367f54725de3e 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 262 280 5.77E-8 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS11035 79891580e98f13895d8367f54725de3e 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 5.77E-8 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS11035 79891580e98f13895d8367f54725de3e 385 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 5.77E-8 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS11035 79891580e98f13895d8367f54725de3e 385 Pfam PF13458 Periplasmic binding protein 30 372 2.8E-62 T 22-04-2016 IPR028081 Leucine-binding protein domain APT61_RS11035 79891580e98f13895d8367f54725de3e 385 SUPERFAMILY SSF53822 29 375 1.19E-89 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS11035 79891580e98f13895d8367f54725de3e 385 PANTHER PTHR30483:SF20 1 374 8.9E-86 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS11035 79891580e98f13895d8367f54725de3e 385 Gene3D G3DSA:3.40.50.2300 29 232 7.9E-61 T 22-04-2016 APT61_RS03165 2f6151ef6581fcd8d9b18f4ee1fc60c9 254 PANTHER PTHR30157 1 253 3.2E-102 T 22-04-2016 APT61_RS03165 2f6151ef6581fcd8d9b18f4ee1fc60c9 254 SUPERFAMILY SSF63380 5 136 9.53E-15 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APT61_RS03165 2f6151ef6581fcd8d9b18f4ee1fc60c9 254 PANTHER PTHR30157:SF1 1 253 3.2E-102 T 22-04-2016 APT61_RS03165 2f6151ef6581fcd8d9b18f4ee1fc60c9 254 Pfam PF08021 Siderophore-interacting FAD-binding domain 21 131 1.6E-30 T 22-04-2016 IPR013113 FAD-binding 9, siderophore-interacting APT61_RS03165 2f6151ef6581fcd8d9b18f4ee1fc60c9 254 Pfam PF04954 Siderophore-interacting protein 139 253 1.1E-22 T 22-04-2016 IPR007037 Siderophore-interacting protein APT61_RS03165 2f6151ef6581fcd8d9b18f4ee1fc60c9 254 Gene3D G3DSA:3.40.50.80 134 252 3.6E-25 T 22-04-2016 APT61_RS03165 2f6151ef6581fcd8d9b18f4ee1fc60c9 254 Gene3D G3DSA:2.40.30.10 10 130 3.7E-31 T 22-04-2016 APT61_RS04080 031b5b4322484557c3d95b044080e422 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04080 031b5b4322484557c3d95b044080e422 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04080 031b5b4322484557c3d95b044080e422 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04080 031b5b4322484557c3d95b044080e422 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 58.346 T 22-04-2016 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria APT61_RS04080 031b5b4322484557c3d95b044080e422 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 9.4E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04080 031b5b4322484557c3d95b044080e422 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 3.1E-113 T 22-04-2016 IPR017685 HTH-type transcriptional regulator ArgP APT61_RS04080 031b5b4322484557c3d95b044080e422 297 SUPERFAMILY SSF53850 92 289 1.43E-19 T 22-04-2016 APT61_RS04080 031b5b4322484557c3d95b044080e422 297 PANTHER PTHR30579:SF2 1 296 4.7E-160 T 22-04-2016 APT61_RS04080 031b5b4322484557c3d95b044080e422 297 Pfam PF03466 LysR substrate binding domain 93 289 8.0E-14 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS04080 031b5b4322484557c3d95b044080e422 297 Gene3D G3DSA:1.10.10.10 1 73 7.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04080 031b5b4322484557c3d95b044080e422 297 Gene3D G3DSA:3.40.190.10 92 196 2.7E-40 T 22-04-2016 APT61_RS04080 031b5b4322484557c3d95b044080e422 297 PANTHER PTHR30579 1 296 4.7E-160 T 22-04-2016 APT61_RS04080 031b5b4322484557c3d95b044080e422 297 SUPERFAMILY SSF46785 4 110 6.42E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS08720 390102064ea85d8fd02e47f1cc220cfd 165 Gene3D G3DSA:3.30.450.40 2 151 9.4E-49 T 22-04-2016 IPR029016 GAF domain-like APT61_RS08720 390102064ea85d8fd02e47f1cc220cfd 165 SMART SM00065 9 161 5.8E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS08720 390102064ea85d8fd02e47f1cc220cfd 165 PANTHER PTHR21021 1 151 1.1E-55 T 22-04-2016 APT61_RS08720 390102064ea85d8fd02e47f1cc220cfd 165 SUPERFAMILY SSF55781 2 147 1.0E-39 T 22-04-2016 IPR029016 GAF domain-like APT61_RS08720 390102064ea85d8fd02e47f1cc220cfd 165 Pfam PF13185 GAF domain 31 151 1.1E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS18850 3f53ef81a7758b6971ae0759643310af 785 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 543 551 7.1E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS18850 3f53ef81a7758b6971ae0759643310af 785 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 491 503 7.1E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS18850 3f53ef81a7758b6971ae0759643310af 785 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 417 430 7.1E-10 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS18850 3f53ef81a7758b6971ae0759643310af 785 Pfam PF00136 DNA polymerase family B 383 737 2.6E-41 T 22-04-2016 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS18850 3f53ef81a7758b6971ae0759643310af 785 Pfam PF03104 DNA polymerase family B, exonuclease domain 198 298 8.1E-8 T 22-04-2016 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS18850 3f53ef81a7758b6971ae0759643310af 785 SUPERFAMILY SSF56672 394 785 2.39E-111 T 22-04-2016 APT61_RS18850 3f53ef81a7758b6971ae0759643310af 785 Gene3D G3DSA:3.90.1600.10 401 433 1.6E-9 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS18850 3f53ef81a7758b6971ae0759643310af 785 Gene3D G3DSA:3.90.1600.10 514 561 1.6E-9 T 22-04-2016 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS18850 3f53ef81a7758b6971ae0759643310af 785 SMART SM00486 150 557 4.0E-72 T 22-04-2016 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS18850 3f53ef81a7758b6971ae0759643310af 785 SUPERFAMILY SSF53098 5 391 5.06E-99 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS18850 3f53ef81a7758b6971ae0759643310af 785 ProSitePatterns PS00116 DNA polymerase family B signature. 545 553 - T 22-04-2016 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS18850 3f53ef81a7758b6971ae0759643310af 785 PANTHER PTHR10322 72 785 3.2E-208 T 22-04-2016 APT61_RS18850 3f53ef81a7758b6971ae0759643310af 785 Gene3D G3DSA:3.30.420.10 150 366 2.1E-34 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS05415 bd0e38378aa43cc61b08b32048a0beee 730 Pfam PF00664 ABC transporter transmembrane region 170 437 4.1E-27 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS05415 bd0e38378aa43cc61b08b32048a0beee 730 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 19 712 4.0E-235 T 22-04-2016 IPR017750 ATPase, type I secretion system APT61_RS05415 bd0e38378aa43cc61b08b32048a0beee 730 SUPERFAMILY SSF52540 476 702 1.51E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05415 bd0e38378aa43cc61b08b32048a0beee 730 Gene3D G3DSA:1.20.1560.10 156 466 1.7E-54 T 22-04-2016 APT61_RS05415 bd0e38378aa43cc61b08b32048a0beee 730 PANTHER PTHR24221:SF260 80 104 0.0 T 22-04-2016 APT61_RS05415 bd0e38378aa43cc61b08b32048a0beee 730 PANTHER PTHR24221:SF260 141 729 0.0 T 22-04-2016 APT61_RS05415 bd0e38378aa43cc61b08b32048a0beee 730 Gene3D G3DSA:3.40.50.300 485 713 1.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05415 bd0e38378aa43cc61b08b32048a0beee 730 Pfam PF00005 ABC transporter 505 650 8.9E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS05415 bd0e38378aa43cc61b08b32048a0beee 730 Gene3D G3DSA:3.90.70.10 17 126 4.3E-17 T 22-04-2016 APT61_RS05415 bd0e38378aa43cc61b08b32048a0beee 730 SUPERFAMILY SSF90123 155 466 2.88E-55 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS05415 bd0e38378aa43cc61b08b32048a0beee 730 PANTHER PTHR24221 80 104 0.0 T 22-04-2016 APT61_RS05415 bd0e38378aa43cc61b08b32048a0beee 730 PANTHER PTHR24221 141 729 0.0 T 22-04-2016 APT61_RS05415 bd0e38378aa43cc61b08b32048a0beee 730 SMART SM00382 510 697 4.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS05725 71ab192ea3d0ba412ba9ccb3f7497eba 232 SMART SM01144 27 218 2.1E-72 T 22-04-2016 IPR005636 DTW APT61_RS05725 71ab192ea3d0ba412ba9ccb3f7497eba 232 Pfam PF03942 DTW domain 30 213 1.2E-41 T 22-04-2016 IPR005636 DTW APT61_RS05725 71ab192ea3d0ba412ba9ccb3f7497eba 232 PANTHER PTHR21392 1 232 1.8E-130 T 22-04-2016 APT61_RS05725 71ab192ea3d0ba412ba9ccb3f7497eba 232 PANTHER PTHR21392:SF1 1 232 1.8E-130 T 22-04-2016 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 2.4E-140 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 22-04-2016 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 PANTHER PTHR20852 1 138 3.6E-278 T 22-04-2016 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 PANTHER PTHR20852 160 469 3.6E-278 T 22-04-2016 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 22-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 SUPERFAMILY SSF55931 102 468 2.45E-140 T 22-04-2016 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 Gene3D G3DSA:3.10.20.70 3 105 1.2E-39 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 SMART SM01230 102 379 6.1E-152 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 SUPERFAMILY SSF54368 3 99 4.58E-36 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 Gene3D G3DSA:3.30.590.10 106 455 3.3E-141 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 4.5E-219 T 22-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 PANTHER PTHR20852:SF15 1 138 3.6E-278 T 22-04-2016 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 PANTHER PTHR20852:SF15 160 469 3.6E-278 T 22-04-2016 APT61_RS00180 3342ef0e37c3e0d325cc1f792e6da900 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 9.5E-32 T 22-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 APT61_RS11870 020f8abcfb7ff242c6c97b808b27ef47 303 Gene3D G3DSA:3.40.50.1820 40 303 4.4E-35 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS11870 020f8abcfb7ff242c6c97b808b27ef47 303 Pfam PF00561 alpha/beta hydrolase fold 52 202 1.4E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS11870 020f8abcfb7ff242c6c97b808b27ef47 303 SUPERFAMILY SSF53474 37 303 1.0E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS11870 020f8abcfb7ff242c6c97b808b27ef47 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 75 90 4.5E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS11870 020f8abcfb7ff242c6c97b808b27ef47 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 121 134 4.5E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS11870 020f8abcfb7ff242c6c97b808b27ef47 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 135 148 4.5E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS11870 020f8abcfb7ff242c6c97b808b27ef47 303 PANTHER PTHR10992 34 303 5.3E-31 T 22-04-2016 APT61_RS13835 237e7d9aefcd2617803aefea587e28f6 285 SUPERFAMILY SSF161098 6 274 3.74E-53 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS13835 237e7d9aefcd2617803aefea587e28f6 285 Gene3D G3DSA:1.10.3720.10 3 273 1.1E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS13835 237e7d9aefcd2617803aefea587e28f6 285 PANTHER PTHR30193 1 284 8.1E-124 T 22-04-2016 APT61_RS13835 237e7d9aefcd2617803aefea587e28f6 285 PANTHER PTHR30193:SF10 1 284 8.1E-124 T 22-04-2016 APT61_RS13835 237e7d9aefcd2617803aefea587e28f6 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 278 5.3E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS20285 4243740089e611403dac6cb5e57680fc 95 PANTHER PTHR34156 6 95 2.8E-53 T 22-04-2016 APT61_RS20285 4243740089e611403dac6cb5e57680fc 95 PANTHER PTHR34156:SF4 6 95 2.8E-53 T 22-04-2016 APT61_RS20285 4243740089e611403dac6cb5e57680fc 95 SUPERFAMILY SSF159871 11 94 4.32E-19 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS20285 4243740089e611403dac6cb5e57680fc 95 Gene3D G3DSA:3.30.1660.10 37 94 2.1E-15 T 22-04-2016 IPR025543 Dodecin-like APT61_RS20285 4243740089e611403dac6cb5e57680fc 95 Pfam PF07338 Protein of unknown function (DUF1471) 39 94 6.3E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 Gene3D G3DSA:3.40.50.80 457 601 2.2E-59 T 22-04-2016 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PRINTS PR00369 Flavodoxin signature 113 124 6.2E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PRINTS PR00369 Flavodoxin signature 65 78 6.2E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PRINTS PR00369 Flavodoxin signature 145 155 6.2E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PRINTS PR00369 Flavodoxin signature 169 188 6.2E-14 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 Pfam PF00175 Oxidoreductase NAD-binding domain 459 565 2.3E-22 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 550 558 9.8E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 458 477 9.8E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 483 492 9.8E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 527 543 9.8E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 421 430 9.8E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 388 395 9.8E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 272 282 9.8E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 496 507 9.8E-30 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PANTHER PTHR19384:SF76 64 601 8.9E-226 T 22-04-2016 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 SUPERFAMILY SSF63380 229 448 2.34E-63 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PIRSF PIRSF000207 1 601 1.4E-281 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 SUPERFAMILY SSF52343 446 601 4.85E-52 T 22-04-2016 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 Gene3D G3DSA:2.40.30.10 231 282 1.0E-39 T 22-04-2016 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 Gene3D G3DSA:2.40.30.10 386 456 1.0E-39 T 22-04-2016 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 601 52.649 T 22-04-2016 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 601 4.9E-281 T 22-04-2016 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 PANTHER PTHR19384 64 601 8.9E-226 T 22-04-2016 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 Gene3D G3DSA:1.20.990.10 283 385 1.1E-40 T 22-04-2016 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain-3 GO:0016491|GO:0055114 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 SUPERFAMILY SSF52218 64 210 5.59E-43 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 Gene3D G3DSA:3.40.50.360 63 210 3.6E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 Pfam PF00258 Flavodoxin 67 197 1.6E-32 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APT61_RS04655 7fd7e0e6040474157169e591f7a547c5 601 Pfam PF00667 FAD binding domain 232 426 2.9E-25 T 22-04-2016 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 Gene3D G3DSA:3.40.50.1270 175 371 1.3E-80 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.072 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 Pfam PF00162 Phosphoglycerate kinase 6 373 7.4E-138 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 Gene3D G3DSA:3.40.50.1260 5 174 1.7E-64 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 PIRSF PIRSF000724 1 387 6.5E-134 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 2.0E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 2.0E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 2.0E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 2.0E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 2.0E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 2.0E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.0E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.0E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 2.0E-82 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 SUPERFAMILY SSF53748 3 383 1.18E-144 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS04055 82f6397f04f568ebfdb23d55d9d0bd33 387 PANTHER PTHR11406 1 387 2.1E-200 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 APT61_RS02760 b3220ae1d940c267e0c6db10a6d7d374 97 SMART SM01103 3 86 3.3E-41 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APT61_RS02760 b3220ae1d940c267e0c6db10a6d7d374 97 PANTHER PTHR31846 1 97 6.1E-46 T 22-04-2016 APT61_RS02760 b3220ae1d940c267e0c6db10a6d7d374 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 7.3E-23 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APT61_RS02760 b3220ae1d940c267e0c6db10a6d7d374 97 Gene3D G3DSA:3.30.110.60 1 94 5.4E-35 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APT61_RS02760 b3220ae1d940c267e0c6db10a6d7d374 97 SUPERFAMILY SSF75471 1 95 1.26E-31 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APT61_RS02760 b3220ae1d940c267e0c6db10a6d7d374 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 9.8E-43 T 22-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 APT61_RS02760 b3220ae1d940c267e0c6db10a6d7d374 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 4.0E-44 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 APT61_RS00575 956d28feec34958bb206f492ba4b07e6 341 SUPERFAMILY SSF53822 68 338 1.83E-90 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS00575 956d28feec34958bb206f492ba4b07e6 341 SUPERFAMILY SSF47413 10 67 4.97E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS00575 956d28feec34958bb206f492ba4b07e6 341 Gene3D G3DSA:3.40.50.2300 66 173 1.2E-29 T 22-04-2016 APT61_RS00575 956d28feec34958bb206f492ba4b07e6 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 55 2.4E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS00575 956d28feec34958bb206f492ba4b07e6 341 Pfam PF13377 Periplasmic binding protein-like domain 176 337 2.9E-42 T 22-04-2016 APT61_RS00575 956d28feec34958bb206f492ba4b07e6 341 Gene3D G3DSA:3.40.50.2300 174 338 2.5E-64 T 22-04-2016 APT61_RS00575 956d28feec34958bb206f492ba4b07e6 341 PANTHER PTHR30146:SF4 9 339 1.7E-148 T 22-04-2016 APT61_RS00575 956d28feec34958bb206f492ba4b07e6 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS00575 956d28feec34958bb206f492ba4b07e6 341 SMART SM00354 9 79 1.6E-28 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS00575 956d28feec34958bb206f492ba4b07e6 341 PANTHER PTHR30146 9 339 1.7E-148 T 22-04-2016 APT61_RS00575 956d28feec34958bb206f492ba4b07e6 341 Gene3D G3DSA:1.10.260.40 10 65 1.4E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS04630 d40d498699fbca2667c92c3f9ac3a8fa 545 PANTHER PTHR11550 1 542 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APT61_RS04630 d40d498699fbca2667c92c3f9ac3a8fa 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 6.3E-65 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APT61_RS04630 d40d498699fbca2667c92c3f9ac3a8fa 545 Gene3D G3DSA:3.40.50.880 288 541 2.0E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS04630 d40d498699fbca2667c92c3f9ac3a8fa 545 SUPERFAMILY SSF52317 289 542 8.6E-89 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS04630 d40d498699fbca2667c92c3f9ac3a8fa 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.415 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APT61_RS04630 d40d498699fbca2667c92c3f9ac3a8fa 545 SUPERFAMILY SSF52540 3 269 1.4E-122 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04630 d40d498699fbca2667c92c3f9ac3a8fa 545 Pfam PF06418 CTP synthase N-terminus 5 266 3.0E-126 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APT61_RS04630 d40d498699fbca2667c92c3f9ac3a8fa 545 Gene3D G3DSA:3.40.50.300 1 280 1.9E-134 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04630 d40d498699fbca2667c92c3f9ac3a8fa 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 5.3E-266 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APT61_RS15910 649d31c281e8f5bba1f617f79be13c94 352 Pfam PF00005 ABC transporter 18 156 3.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15910 649d31c281e8f5bba1f617f79be13c94 352 Gene3D G3DSA:2.40.50.100 277 348 4.0E-22 T 22-04-2016 APT61_RS15910 649d31c281e8f5bba1f617f79be13c94 352 PANTHER PTHR24220 1 335 7.1E-119 T 22-04-2016 APT61_RS15910 649d31c281e8f5bba1f617f79be13c94 352 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 288 351 3.6E-21 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 APT61_RS15910 649d31c281e8f5bba1f617f79be13c94 352 SMART SM00382 23 206 6.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15910 649d31c281e8f5bba1f617f79be13c94 352 Gene3D G3DSA:3.40.50.300 18 218 6.1E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15910 649d31c281e8f5bba1f617f79be13c94 352 Pfam PF03459 TOBE domain 290 350 2.4E-15 T 22-04-2016 IPR005116 Transport-associated OB, type 1 APT61_RS15910 649d31c281e8f5bba1f617f79be13c94 352 SUPERFAMILY SSF52540 8 220 5.21E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15910 649d31c281e8f5bba1f617f79be13c94 352 PANTHER PTHR24220:SF284 1 335 7.1E-119 T 22-04-2016 APT61_RS15910 649d31c281e8f5bba1f617f79be13c94 352 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 8.3E-157 T 22-04-2016 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 APT61_RS15910 649d31c281e8f5bba1f617f79be13c94 352 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS15910 649d31c281e8f5bba1f617f79be13c94 352 SUPERFAMILY SSF50331 235 350 4.04E-20 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 PANTHER PTHR11573 6 752 0.0 T 22-04-2016 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 SUPERFAMILY SSF51998 222 740 2.04E-168 T 22-04-2016 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 PANTHER PTHR11573:SF17 6 752 0.0 T 22-04-2016 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 2.0E-177 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 Pfam PF03477 ATP cone domain 6 92 4.5E-15 T 22-04-2016 IPR005144 ATP-cone domain APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 3.8E-118 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 SUPERFAMILY SSF48168 10 221 3.79E-73 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 Gene3D G3DSA:3.20.70.20 133 344 1.6E-43 T 22-04-2016 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 Gene3D G3DSA:3.20.70.20 398 559 1.6E-43 T 22-04-2016 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 Gene3D G3DSA:3.20.70.20 610 700 1.6E-43 T 22-04-2016 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 3.1E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 3.1E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 3.1E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 3.1E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 3.1E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 3.1E-38 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06990 425f119114a920df5d0d5b4bb1c4e926 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 141 219 2.7E-12 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APT61_RS15915 f27dcd699c62167294782029dedecc43 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 222 8.3E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15915 f27dcd699c62167294782029dedecc43 229 PANTHER PTHR30183 1 227 9.8E-89 T 22-04-2016 APT61_RS15915 f27dcd699c62167294782029dedecc43 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 220 3.3E-70 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 APT61_RS15915 f27dcd699c62167294782029dedecc43 229 Gene3D G3DSA:1.10.3720.10 8 226 9.3E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15915 f27dcd699c62167294782029dedecc43 229 SUPERFAMILY SSF161098 6 219 2.62E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 SUPERFAMILY SSF50677 234 423 3.35E-56 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 50 61 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 Pfam PF08264 Anticodon-binding domain of tRNA 710 829 6.8E-16 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 Gene3D G3DSA:1.10.730.10 656 803 1.7E-45 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 PANTHER PTHR11946 1 214 0.0 T 22-04-2016 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 13 867 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 SUPERFAMILY SSF52374 424 676 7.24E-142 T 22-04-2016 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 SUPERFAMILY SSF52374 13 234 7.24E-142 T 22-04-2016 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 229 411 2.4E-78 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 PANTHER PTHR11946 248 579 0.0 T 22-04-2016 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 PANTHER PTHR11946 622 867 0.0 T 22-04-2016 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 12 867 23.328 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 161 177 4.3E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 193 206 4.3E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 223 242 4.3E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 135 152 4.3E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 565 575 4.3E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 493 511 4.3E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 PRINTS PR00985 Leucyl-tRNA synthetase signature 532 554 4.3E-52 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 425 580 4.5E-7 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 22 179 1.2E-26 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 627 659 1.2E-6 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 Gene3D G3DSA:3.90.740.10 231 432 1.9E-61 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 PANTHER PTHR11946:SF7 1 214 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 SUPERFAMILY SSF47323 670 867 3.55E-37 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 PANTHER PTHR11946:SF7 248 579 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 PANTHER PTHR11946:SF7 622 867 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 Gene3D G3DSA:3.40.50.620 626 655 6.2E-152 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 Gene3D G3DSA:3.40.50.620 12 230 6.2E-152 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS16385 82c230f096eaa2456d69fe53a1c0ca07 868 Gene3D G3DSA:3.40.50.620 433 581 6.2E-152 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS07635 d3f0e122d634935d267b3a2d6f1ddf7b 213 Gene3D G3DSA:3.40.50.300 3 205 1.7E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07635 d3f0e122d634935d267b3a2d6f1ddf7b 213 SUPERFAMILY SSF52540 8 205 9.23E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07635 d3f0e122d634935d267b3a2d6f1ddf7b 213 PRINTS PR00988 Uridine kinase signature 179 192 7.5E-39 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APT61_RS07635 d3f0e122d634935d267b3a2d6f1ddf7b 213 PRINTS PR00988 Uridine kinase signature 42 53 7.5E-39 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APT61_RS07635 d3f0e122d634935d267b3a2d6f1ddf7b 213 PRINTS PR00988 Uridine kinase signature 8 25 7.5E-39 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APT61_RS07635 d3f0e122d634935d267b3a2d6f1ddf7b 213 PRINTS PR00988 Uridine kinase signature 87 102 7.5E-39 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APT61_RS07635 d3f0e122d634935d267b3a2d6f1ddf7b 213 PRINTS PR00988 Uridine kinase signature 143 153 7.5E-39 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APT61_RS07635 d3f0e122d634935d267b3a2d6f1ddf7b 213 PRINTS PR00988 Uridine kinase signature 157 168 7.5E-39 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APT61_RS07635 d3f0e122d634935d267b3a2d6f1ddf7b 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 41.687 T 22-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APT61_RS07635 d3f0e122d634935d267b3a2d6f1ddf7b 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 6.7E-46 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 APT61_RS07635 d3f0e122d634935d267b3a2d6f1ddf7b 213 TIGRFAM TIGR00235 udk: uridine kinase 5 213 1.2E-96 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 APT61_RS07635 d3f0e122d634935d267b3a2d6f1ddf7b 213 PANTHER PTHR10285 1 213 5.5E-95 T 22-04-2016 APT61_RS04990 4e41616df9e0069a3d5ac4d8b6965ed3 201 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS04990 4e41616df9e0069a3d5ac4d8b6965ed3 201 Gene3D G3DSA:3.30.70.20 51 88 6.3E-16 T 22-04-2016 APT61_RS04990 4e41616df9e0069a3d5ac4d8b6965ed3 201 PANTHER PTHR11938:SF111 1 101 2.0E-36 T 22-04-2016 APT61_RS04990 4e41616df9e0069a3d5ac4d8b6965ed3 201 PANTHER PTHR11938:SF111 133 174 2.0E-36 T 22-04-2016 APT61_RS04990 4e41616df9e0069a3d5ac4d8b6965ed3 201 Gene3D G3DSA:3.30.70.20 155 185 4.4E-22 T 22-04-2016 APT61_RS04990 4e41616df9e0069a3d5ac4d8b6965ed3 201 Gene3D G3DSA:3.30.70.20 5 50 4.4E-22 T 22-04-2016 APT61_RS04990 4e41616df9e0069a3d5ac4d8b6965ed3 201 Pfam PF13247 4Fe-4S dicluster domain 47 98 2.4E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS04990 4e41616df9e0069a3d5ac4d8b6965ed3 201 PANTHER PTHR11938 1 101 2.0E-36 T 22-04-2016 APT61_RS04990 4e41616df9e0069a3d5ac4d8b6965ed3 201 PANTHER PTHR11938 133 174 2.0E-36 T 22-04-2016 APT61_RS04990 4e41616df9e0069a3d5ac4d8b6965ed3 201 SUPERFAMILY SSF54862 141 182 4.33E-36 T 22-04-2016 APT61_RS04990 4e41616df9e0069a3d5ac4d8b6965ed3 201 SUPERFAMILY SSF54862 2 106 4.33E-36 T 22-04-2016 APT61_RS04990 4e41616df9e0069a3d5ac4d8b6965ed3 201 Gene3D G3DSA:3.30.70.20 89 154 1.3E-6 T 22-04-2016 APT61_RS02430 9aaad0b96f284db3b957ba2d0c10e880 1265 Pfam PF13116 Protein of unknown function 505 788 3.8E-94 T 22-04-2016 IPR025263 Domain of unknown function DUF3971 APT61_RS02430 9aaad0b96f284db3b957ba2d0c10e880 1265 Pfam PF13502 AsmA-like C-terminal region 1009 1251 3.3E-67 T 22-04-2016 IPR032712 AsmA-like, C-terminal APT61_RS02430 9aaad0b96f284db3b957ba2d0c10e880 1265 PANTHER PTHR38690 1 1263 0.0 T 22-04-2016 APT61_RS02430 9aaad0b96f284db3b957ba2d0c10e880 1265 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1261 0.0 T 22-04-2016 IPR011836 Conserved hypothetical protein CHP02099 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 Gene3D G3DSA:1.10.601.10 11 80 8.2E-15 T 22-04-2016 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 SUPERFAMILY SSF88659 89 156 2.53E-16 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 Pfam PF04542 Sigma-70 region 2 16 88 1.9E-16 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 Gene3D G3DSA:1.10.10.10 88 135 1.5E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 PANTHER PTHR30385:SF7 15 238 1.7E-73 T 22-04-2016 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 SUPERFAMILY SSF88946 5 88 3.66E-23 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 SUPERFAMILY SSF88659 160 237 7.66E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 Pfam PF04539 Sigma-70 region 3 97 168 3.6E-19 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 4.7E-86 T 22-04-2016 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 PIRSF PIRSF000770 1 238 1.4E-41 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 2.2E-32 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 PANTHER PTHR30385 15 238 1.7E-73 T 22-04-2016 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 Pfam PF04545 Sigma-70, region 4 185 233 1.5E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 63.249 T 22-04-2016 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 Gene3D G3DSA:1.10.10.10 174 238 1.3E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 PRINTS PR00046 Major sigma-70 factor signature 67 75 3.4E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 PRINTS PR00046 Major sigma-70 factor signature 189 201 3.4E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 PRINTS PR00046 Major sigma-70 factor signature 221 232 3.4E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 PRINTS PR00046 Major sigma-70 factor signature 43 56 3.4E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS08165 76c652c05dca6dff2cf7a1c7d8b0d2d0 239 PRINTS PR00046 Major sigma-70 factor signature 206 221 3.4E-13 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS02600 d711d65a5e2494797c7a7877fcb34dae 360 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 358 2.3E-135 T 22-04-2016 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 APT61_RS02600 d711d65a5e2494797c7a7877fcb34dae 360 PANTHER PTHR33529:SF1 1 360 6.5E-172 T 22-04-2016 APT61_RS02600 d711d65a5e2494797c7a7877fcb34dae 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 358 7.6E-73 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 APT61_RS02600 d711d65a5e2494797c7a7877fcb34dae 360 PANTHER PTHR33529 1 360 6.5E-172 T 22-04-2016 APT61_RS17785 1d88645c8881b3bc1e5108e795a0e2cc 594 SMART SM00267 416 588 1.3E-48 T 22-04-2016 IPR000160 GGDEF domain APT61_RS17785 1d88645c8881b3bc1e5108e795a0e2cc 594 Pfam PF00990 Diguanylate cyclase, GGDEF domain 427 583 1.4E-43 T 22-04-2016 IPR000160 GGDEF domain APT61_RS17785 1d88645c8881b3bc1e5108e795a0e2cc 594 PANTHER PTHR10799 459 582 1.5E-25 T 22-04-2016 APT61_RS17785 1d88645c8881b3bc1e5108e795a0e2cc 594 SMART SM00304 207 260 2.7E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS17785 1d88645c8881b3bc1e5108e795a0e2cc 594 PANTHER PTHR10799:SF657 459 582 1.5E-25 T 22-04-2016 APT61_RS17785 1d88645c8881b3bc1e5108e795a0e2cc 594 Pfam PF00672 HAMP domain 189 253 1.1E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS17785 1d88645c8881b3bc1e5108e795a0e2cc 594 SUPERFAMILY SSF55781 308 426 6.62E-10 T 22-04-2016 IPR029016 GAF domain-like APT61_RS17785 1d88645c8881b3bc1e5108e795a0e2cc 594 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 426 586 1.4E-47 T 22-04-2016 IPR000160 GGDEF domain APT61_RS17785 1d88645c8881b3bc1e5108e795a0e2cc 594 Gene3D G3DSA:3.30.70.270 429 588 2.5E-48 T 22-04-2016 APT61_RS17785 1d88645c8881b3bc1e5108e795a0e2cc 594 SUPERFAMILY SSF55073 432 588 7.06E-43 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS17785 1d88645c8881b3bc1e5108e795a0e2cc 594 Gene3D G3DSA:3.30.450.40 271 426 4.1E-7 T 22-04-2016 IPR029016 GAF domain-like APT61_RS17785 1d88645c8881b3bc1e5108e795a0e2cc 594 SUPERFAMILY SSF158472 207 254 1.31E-7 T 22-04-2016 APT61_RS15950 2f690ccd67b0dcbe58c16240b2bcf37f 346 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 171 180 - T 22-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 APT61_RS15950 2f690ccd67b0dcbe58c16240b2bcf37f 346 SUPERFAMILY SSF74650 5 343 8.16E-107 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APT61_RS15950 2f690ccd67b0dcbe58c16240b2bcf37f 346 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 13 343 1.0E-141 T 22-04-2016 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 APT61_RS15950 2f690ccd67b0dcbe58c16240b2bcf37f 346 Pfam PF01263 Aldose 1-epimerase 16 342 3.9E-90 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 APT61_RS15950 2f690ccd67b0dcbe58c16240b2bcf37f 346 PIRSF PIRSF005096 2 346 2.0E-123 T 22-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 APT61_RS15950 2f690ccd67b0dcbe58c16240b2bcf37f 346 PANTHER PTHR10091:SF0 8 346 4.0E-142 T 22-04-2016 APT61_RS15950 2f690ccd67b0dcbe58c16240b2bcf37f 346 Gene3D G3DSA:2.70.98.10 10 344 8.1E-117 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APT61_RS15950 2f690ccd67b0dcbe58c16240b2bcf37f 346 PANTHER PTHR10091 8 346 4.0E-142 T 22-04-2016 APT61_RS05750 61f2ff11672e2aeb1c70c4fa6b8ee8cc 440 Gene3D G3DSA:3.40.50.300 3 214 1.9E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05750 61f2ff11672e2aeb1c70c4fa6b8ee8cc 440 SUPERFAMILY SSF52540 76 359 9.56E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05750 61f2ff11672e2aeb1c70c4fa6b8ee8cc 440 Pfam PF00270 DEAD/DEAH box helicase 28 198 3.2E-46 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APT61_RS05750 61f2ff11672e2aeb1c70c4fa6b8ee8cc 440 SMART SM00487 23 223 1.1E-55 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS05750 61f2ff11672e2aeb1c70c4fa6b8ee8cc 440 SMART SM00490 262 343 5.9E-30 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS05750 61f2ff11672e2aeb1c70c4fa6b8ee8cc 440 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APT61_RS05750 61f2ff11672e2aeb1c70c4fa6b8ee8cc 440 PANTHER PTHR24031:SF334 3 431 1.0E-227 T 22-04-2016 APT61_RS05750 61f2ff11672e2aeb1c70c4fa6b8ee8cc 440 PANTHER PTHR24031 3 431 1.0E-227 T 22-04-2016 APT61_RS05750 61f2ff11672e2aeb1c70c4fa6b8ee8cc 440 Gene3D G3DSA:3.40.50.300 215 373 3.9E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05750 61f2ff11672e2aeb1c70c4fa6b8ee8cc 440 Pfam PF00271 Helicase conserved C-terminal domain 235 343 1.6E-29 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS05750 61f2ff11672e2aeb1c70c4fa6b8ee8cc 440 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 427 49.146 T 22-04-2016 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 APT61_RS02845 5f522868c1b0e6cf7bc961f462c2921b 638 PANTHER PTHR24031 6 464 4.6E-276 T 22-04-2016 APT61_RS02845 5f522868c1b0e6cf7bc961f462c2921b 638 PANTHER PTHR24031 539 637 4.6E-276 T 22-04-2016 APT61_RS02845 5f522868c1b0e6cf7bc961f462c2921b 638 PANTHER PTHR24031:SF261 6 464 4.6E-276 T 22-04-2016 APT61_RS02845 5f522868c1b0e6cf7bc961f462c2921b 638 PANTHER PTHR24031:SF261 539 637 4.6E-276 T 22-04-2016 APT61_RS02845 5f522868c1b0e6cf7bc961f462c2921b 638 Pfam PF00270 DEAD/DEAH box helicase 31 195 1.9E-51 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APT61_RS02845 5f522868c1b0e6cf7bc961f462c2921b 638 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site APT61_RS02845 5f522868c1b0e6cf7bc961f462c2921b 638 Pfam PF03880 DbpA RNA binding domain 496 565 2.8E-20 T 22-04-2016 IPR005580 DbpA, RNA-binding domain APT61_RS02845 5f522868c1b0e6cf7bc961f462c2921b 638 SMART SM00487 25 223 2.3E-65 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS02845 5f522868c1b0e6cf7bc961f462c2921b 638 SMART SM00490 259 340 1.5E-31 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS02845 5f522868c1b0e6cf7bc961f462c2921b 638 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 567 47.059 T 22-04-2016 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 APT61_RS02845 5f522868c1b0e6cf7bc961f462c2921b 638 SUPERFAMILY SSF52540 75 361 5.68E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02845 5f522868c1b0e6cf7bc961f462c2921b 638 Gene3D G3DSA:3.40.50.300 208 374 1.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02845 5f522868c1b0e6cf7bc961f462c2921b 638 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.5E-28 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS02845 5f522868c1b0e6cf7bc961f462c2921b 638 Gene3D G3DSA:3.40.50.300 6 207 1.9E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11535 b2bdfb4fdad9e42b5589aeed27e80b19 156 Pfam PF04074 Domain of unknown function (DUF386) 2 150 2.4E-26 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APT61_RS11535 b2bdfb4fdad9e42b5589aeed27e80b19 156 Gene3D G3DSA:2.60.120.370 2 152 7.5E-32 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APT61_RS11535 b2bdfb4fdad9e42b5589aeed27e80b19 156 PANTHER PTHR34986 2 155 4.2E-29 T 22-04-2016 APT61_RS11535 b2bdfb4fdad9e42b5589aeed27e80b19 156 SUPERFAMILY SSF51197 2 153 5.77E-28 T 22-04-2016 APT61_RS11535 b2bdfb4fdad9e42b5589aeed27e80b19 156 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 153 1.2E-28 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APT61_RS18955 799c7eac45177691988a01f182236869 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 38.136 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APT61_RS18955 799c7eac45177691988a01f182236869 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 2.9E-99 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APT61_RS18955 799c7eac45177691988a01f182236869 316 Pfam PF02401 LytB protein 3 282 8.4E-92 T 22-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 APT61_RS18955 799c7eac45177691988a01f182236869 316 PANTHER PTHR30426 1 316 7.4E-162 T 22-04-2016 APT61_RS10705 b88c40ef0c3dc04f0dee88d34d2a334a 108 Pfam PF09313 Domain of unknown function (DUF1971) 12 96 4.8E-23 T 22-04-2016 IPR015392 Domain of unknown function DUF1971 APT61_RS10705 b88c40ef0c3dc04f0dee88d34d2a334a 108 SUPERFAMILY SSF51197 1 104 6.87E-33 T 22-04-2016 APT61_RS10705 b88c40ef0c3dc04f0dee88d34d2a334a 108 PIRSF PIRSF020632 1 108 1.5E-46 T 22-04-2016 IPR014510 Tellurite resistance predicted, YeaR APT61_RS10705 b88c40ef0c3dc04f0dee88d34d2a334a 108 Gene3D G3DSA:2.60.120.10 3 105 1.2E-38 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS21210 2c28319b359b41f7416aaa95627c1090 234 PANTHER PTHR23105 21 229 5.5E-81 T 22-04-2016 APT61_RS21210 2c28319b359b41f7416aaa95627c1090 234 Gene3D G3DSA:3.30.190.20 161 225 2.0E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APT61_RS21210 2c28319b359b41f7416aaa95627c1090 234 Gene3D G3DSA:3.30.190.20 17 68 2.0E-46 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 APT61_RS21210 2c28319b359b41f7416aaa95627c1090 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 1.5E-106 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APT61_RS21210 2c28319b359b41f7416aaa95627c1090 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 2.8E-51 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein APT61_RS21210 2c28319b359b41f7416aaa95627c1090 234 PANTHER PTHR23105:SF5 21 229 5.5E-81 T 22-04-2016 APT61_RS21210 2c28319b359b41f7416aaa95627c1090 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.113 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 APT61_RS21210 2c28319b359b41f7416aaa95627c1090 234 Gene3D G3DSA:3.40.50.790 69 159 3.9E-41 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich APT61_RS21210 2c28319b359b41f7416aaa95627c1090 234 PIRSF PIRSF002155 1 227 2.8E-77 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 APT61_RS21210 2c28319b359b41f7416aaa95627c1090 234 SUPERFAMILY SSF56808 6 225 2.49E-82 T 22-04-2016 IPR023674 Ribosomal protein L1-like APT61_RS21210 2c28319b359b41f7416aaa95627c1090 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site APT61_RS15065 c5effeaf8c76757a6ac3bc48195c6619 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS15065 c5effeaf8c76757a6ac3bc48195c6619 573 Pfam PF00664 ABC transporter transmembrane region 80 286 3.9E-11 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS15065 c5effeaf8c76757a6ac3bc48195c6619 573 Pfam PF00005 ABC transporter 356 502 2.6E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15065 c5effeaf8c76757a6ac3bc48195c6619 573 PANTHER PTHR24222:SF30 1 573 7.2E-265 T 22-04-2016 APT61_RS15065 c5effeaf8c76757a6ac3bc48195c6619 573 SMART SM00382 365 549 2.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15065 c5effeaf8c76757a6ac3bc48195c6619 573 SUPERFAMILY SSF90123 8 323 2.22E-41 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS15065 c5effeaf8c76757a6ac3bc48195c6619 573 Gene3D G3DSA:1.20.1560.10 9 322 1.5E-30 T 22-04-2016 APT61_RS15065 c5effeaf8c76757a6ac3bc48195c6619 573 Gene3D G3DSA:3.40.50.300 338 568 6.7E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15065 c5effeaf8c76757a6ac3bc48195c6619 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 1.2E-178 T 22-04-2016 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 APT61_RS15065 c5effeaf8c76757a6ac3bc48195c6619 573 SUPERFAMILY SSF52540 334 570 1.81E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15065 c5effeaf8c76757a6ac3bc48195c6619 573 PANTHER PTHR24222 1 573 7.2E-265 T 22-04-2016 APT61_RS08575 71632ea5f60b2a8a84e0f1f190075297 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 331 1.0E-39 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APT61_RS08575 71632ea5f60b2a8a84e0f1f190075297 336 PANTHER PTHR13779:SF25 1 336 1.8E-190 T 22-04-2016 APT61_RS08575 71632ea5f60b2a8a84e0f1f190075297 336 SUPERFAMILY SSF46785 260 333 1.02E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS08575 71632ea5f60b2a8a84e0f1f190075297 336 Gene3D G3DSA:3.40.50.300 23 178 1.7E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08575 71632ea5f60b2a8a84e0f1f190075297 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 1.2E-146 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APT61_RS08575 71632ea5f60b2a8a84e0f1f190075297 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 3.0E-32 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 APT61_RS08575 71632ea5f60b2a8a84e0f1f190075297 336 PANTHER PTHR13779 1 336 1.8E-190 T 22-04-2016 APT61_RS08575 71632ea5f60b2a8a84e0f1f190075297 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 184.588 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 APT61_RS08575 71632ea5f60b2a8a84e0f1f190075297 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 7.2E-117 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 APT61_RS08575 71632ea5f60b2a8a84e0f1f190075297 336 Gene3D G3DSA:1.10.8.60 187 258 7.8E-34 T 22-04-2016 APT61_RS08575 71632ea5f60b2a8a84e0f1f190075297 336 SUPERFAMILY SSF52540 23 255 8.07E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08575 71632ea5f60b2a8a84e0f1f190075297 336 SMART SM00382 54 181 1.3E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS08575 71632ea5f60b2a8a84e0f1f190075297 336 Gene3D G3DSA:1.10.10.10 260 330 1.1E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03600 c9ca82df28781c0bd551c16017ee983e 482 PANTHER PTHR30026:SF3 1 453 1.4E-171 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 APT61_RS03600 c9ca82df28781c0bd551c16017ee983e 482 Pfam PF02321 Outer membrane efflux protein 232 427 5.6E-32 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APT61_RS03600 c9ca82df28781c0bd551c16017ee983e 482 Pfam PF02321 Outer membrane efflux protein 27 209 2.5E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APT61_RS03600 c9ca82df28781c0bd551c16017ee983e 482 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 441 4.8E-137 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 APT61_RS03600 c9ca82df28781c0bd551c16017ee983e 482 Gene3D G3DSA:1.20.1600.10 12 435 7.0E-92 T 22-04-2016 APT61_RS03600 c9ca82df28781c0bd551c16017ee983e 482 SUPERFAMILY SSF56954 25 445 1.31E-96 T 22-04-2016 APT61_RS03600 c9ca82df28781c0bd551c16017ee983e 482 PANTHER PTHR30026 1 453 1.4E-171 T 22-04-2016 APT61_RS19325 08aa86213fdb6ab22fe561af1c791804 267 PANTHER PTHR30143 1 267 4.7E-99 T 22-04-2016 APT61_RS19325 08aa86213fdb6ab22fe561af1c791804 267 Gene3D G3DSA:3.90.850.10 1 267 1.3E-84 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APT61_RS19325 08aa86213fdb6ab22fe561af1c791804 267 TIGRFAM TIGR02312 HpaH: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 1 267 8.6E-140 T 22-04-2016 IPR012690 2-oxo-hepta-3-ene-1,7-dioic acid hydratase GO:0019439 UniPathway: UPA00208 APT61_RS19325 08aa86213fdb6ab22fe561af1c791804 267 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 76 265 8.6E-7 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APT61_RS19325 08aa86213fdb6ab22fe561af1c791804 267 SUPERFAMILY SSF56529 2 267 3.79E-76 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APT61_RS03095 a6892fe0816dcb139e094e385518cf09 378 PANTHER PTHR18895 79 378 2.7E-168 T 22-04-2016 APT61_RS03095 a6892fe0816dcb139e094e385518cf09 378 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APT61_RS03095 a6892fe0816dcb139e094e385518cf09 378 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 373 49.365 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS03095 a6892fe0816dcb139e094e385518cf09 378 Pfam PF05175 Methyltransferase small domain 199 370 4.8E-57 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APT61_RS03095 a6892fe0816dcb139e094e385518cf09 378 Gene3D G3DSA:3.40.50.150 191 373 6.5E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS03095 a6892fe0816dcb139e094e385518cf09 378 SUPERFAMILY SSF53335 192 373 5.53E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS03095 a6892fe0816dcb139e094e385518cf09 378 PANTHER PTHR18895:SF6 79 378 2.7E-168 T 22-04-2016 APT61_RS03095 a6892fe0816dcb139e094e385518cf09 378 PIRSF PIRSF037565 1 374 1.9E-160 T 22-04-2016 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS17635 fabab640afbca8ca1d83d14e65c655c2 924 SMART SM00869 663 913 1.2E-40 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS17635 fabab640afbca8ca1d83d14e65c655c2 924 Pfam PF03797 Autotransporter beta-domain 662 906 1.9E-41 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS17635 fabab640afbca8ca1d83d14e65c655c2 924 PANTHER PTHR35037:SF2 1 924 5.1E-293 T 22-04-2016 APT61_RS17635 fabab640afbca8ca1d83d14e65c655c2 924 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 549 924 5.1E-75 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 APT61_RS17635 fabab640afbca8ca1d83d14e65c655c2 924 Gene3D G3DSA:2.40.128.130 630 924 1.4E-66 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS17635 fabab640afbca8ca1d83d14e65c655c2 924 SUPERFAMILY SSF103515 632 924 6.8E-52 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS17635 fabab640afbca8ca1d83d14e65c655c2 924 PRINTS PR01484 Pertactin virulence factor family signature 879 904 3.9E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APT61_RS17635 fabab640afbca8ca1d83d14e65c655c2 924 PRINTS PR01484 Pertactin virulence factor family signature 642 660 3.9E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APT61_RS17635 fabab640afbca8ca1d83d14e65c655c2 924 PRINTS PR01484 Pertactin virulence factor family signature 813 836 3.9E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APT61_RS17635 fabab640afbca8ca1d83d14e65c655c2 924 PRINTS PR01484 Pertactin virulence factor family signature 703 727 3.9E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APT61_RS17635 fabab640afbca8ca1d83d14e65c655c2 924 PRINTS PR01484 Pertactin virulence factor family signature 904 924 3.9E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APT61_RS17635 fabab640afbca8ca1d83d14e65c655c2 924 PRINTS PR01484 Pertactin virulence factor family signature 842 863 3.9E-10 T 22-04-2016 IPR003991 Pertactin virulence factor family GO:0007155 APT61_RS17635 fabab640afbca8ca1d83d14e65c655c2 924 SUPERFAMILY SSF51126 168 619 1.26E-14 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APT61_RS17635 fabab640afbca8ca1d83d14e65c655c2 924 PANTHER PTHR35037 1 924 5.1E-293 T 22-04-2016 APT61_RS20510 1f14c3549b5c9a60c95f56c10d9cdaa3 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 2.1E-153 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APT61_RS20510 1f14c3549b5c9a60c95f56c10d9cdaa3 433 PIRSF PIRSF004539 1 433 6.2E-181 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APT61_RS20510 1f14c3549b5c9a60c95f56c10d9cdaa3 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 1.7E-197 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APT61_RS20510 1f14c3549b5c9a60c95f56c10d9cdaa3 433 PANTHER PTHR36106:SF2 1 433 1.3E-266 T 22-04-2016 APT61_RS20510 1f14c3549b5c9a60c95f56c10d9cdaa3 433 PANTHER PTHR36106 1 433 1.3E-266 T 22-04-2016 APT61_RS06110 aea2a43a28b74bde9dcf71a2febbdb20 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.1E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS06110 aea2a43a28b74bde9dcf71a2febbdb20 294 Gene3D G3DSA:3.40.190.10 195 262 3.5E-18 T 22-04-2016 APT61_RS06110 aea2a43a28b74bde9dcf71a2febbdb20 294 SUPERFAMILY SSF46785 4 114 4.05E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS06110 aea2a43a28b74bde9dcf71a2febbdb20 294 PANTHER PTHR30126:SF11 4 291 5.4E-72 T 22-04-2016 APT61_RS06110 aea2a43a28b74bde9dcf71a2febbdb20 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS06110 aea2a43a28b74bde9dcf71a2febbdb20 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS06110 aea2a43a28b74bde9dcf71a2febbdb20 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS06110 aea2a43a28b74bde9dcf71a2febbdb20 294 Pfam PF03466 LysR substrate binding domain 89 292 2.4E-44 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS06110 aea2a43a28b74bde9dcf71a2febbdb20 294 SUPERFAMILY SSF53850 90 292 9.77E-42 T 22-04-2016 APT61_RS06110 aea2a43a28b74bde9dcf71a2febbdb20 294 Gene3D G3DSA:1.10.10.10 4 90 8.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS06110 aea2a43a28b74bde9dcf71a2febbdb20 294 Gene3D G3DSA:3.40.190.10 91 194 3.6E-25 T 22-04-2016 APT61_RS06110 aea2a43a28b74bde9dcf71a2febbdb20 294 PANTHER PTHR30126 4 291 5.4E-72 T 22-04-2016 APT61_RS21735 bc9beeee1d3cf2a5cbe6991cc3b52674 207 SUPERFAMILY SSF52540 3 189 5.35E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21735 bc9beeee1d3cf2a5cbe6991cc3b52674 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.252 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APT61_RS21735 bc9beeee1d3cf2a5cbe6991cc3b52674 207 Gene3D G3DSA:3.30.63.10 47 87 4.8E-29 T 22-04-2016 APT61_RS21735 bc9beeee1d3cf2a5cbe6991cc3b52674 207 Gene3D G3DSA:3.40.50.300 18 46 1.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21735 bc9beeee1d3cf2a5cbe6991cc3b52674 207 PANTHER PTHR23117:SF13 1 204 1.9E-107 T 22-04-2016 APT61_RS21735 bc9beeee1d3cf2a5cbe6991cc3b52674 207 Pfam PF00625 Guanylate kinase 5 185 8.6E-69 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APT61_RS21735 bc9beeee1d3cf2a5cbe6991cc3b52674 207 PANTHER PTHR23117 1 204 1.9E-107 T 22-04-2016 APT61_RS21735 bc9beeee1d3cf2a5cbe6991cc3b52674 207 SMART SM00072 3 187 3.7E-86 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APT61_RS21735 bc9beeee1d3cf2a5cbe6991cc3b52674 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APT61_RS21735 bc9beeee1d3cf2a5cbe6991cc3b52674 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 6.8E-76 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 APT61_RS21735 bc9beeee1d3cf2a5cbe6991cc3b52674 207 Gene3D G3DSA:3.40.50.300 88 204 5.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21735 bc9beeee1d3cf2a5cbe6991cc3b52674 207 Gene3D G3DSA:3.40.50.300 1 17 5.3E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21260 d3b5509e2839714abb05f0d4d7ca0be9 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 1.3E-18 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS21260 d3b5509e2839714abb05f0d4d7ca0be9 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 324 3.3E-25 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS21260 d3b5509e2839714abb05f0d4d7ca0be9 337 SMART SM00382 47 239 3.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS21260 d3b5509e2839714abb05f0d4d7ca0be9 337 Gene3D G3DSA:3.40.50.300 11 263 3.1E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21260 d3b5509e2839714abb05f0d4d7ca0be9 337 Pfam PF00005 ABC transporter 38 189 9.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS21260 d3b5509e2839714abb05f0d4d7ca0be9 337 PANTHER PTHR24220 14 330 1.4E-217 T 22-04-2016 APT61_RS21260 d3b5509e2839714abb05f0d4d7ca0be9 337 SUPERFAMILY SSF52540 13 261 1.54E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21260 d3b5509e2839714abb05f0d4d7ca0be9 337 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS21260 d3b5509e2839714abb05f0d4d7ca0be9 337 PANTHER PTHR24220:SF493 14 330 1.4E-217 T 22-04-2016 APT61_RS00465 04290ccb6a4e279f9da3465c178c15d6 232 PANTHER PTHR26402 2 231 1.3E-81 T 22-04-2016 APT61_RS00465 04290ccb6a4e279f9da3465c178c15d6 232 SMART SM00448 2 111 7.3E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS00465 04290ccb6a4e279f9da3465c178c15d6 232 SUPERFAMILY SSF52172 2 188 2.42E-40 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS00465 04290ccb6a4e279f9da3465c178c15d6 232 Pfam PF00072 Response regulator receiver domain 4 112 4.3E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS00465 04290ccb6a4e279f9da3465c178c15d6 232 PANTHER PTHR26402:SF117 2 231 1.3E-81 T 22-04-2016 APT61_RS00465 04290ccb6a4e279f9da3465c178c15d6 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 2.8E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS00465 04290ccb6a4e279f9da3465c178c15d6 232 Gene3D G3DSA:1.10.10.10 130 229 1.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00465 04290ccb6a4e279f9da3465c178c15d6 232 SMART SM00862 152 228 2.9E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS00465 04290ccb6a4e279f9da3465c178c15d6 232 Gene3D G3DSA:3.40.50.2300 2 126 9.9E-41 T 22-04-2016 APT61_RS11570 56f3435122296e71bb873bde7ff28a9c 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 1.4E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS11570 56f3435122296e71bb873bde7ff28a9c 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.4E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS11570 56f3435122296e71bb873bde7ff28a9c 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 1.4E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS11570 56f3435122296e71bb873bde7ff28a9c 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 1.4E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS11570 56f3435122296e71bb873bde7ff28a9c 144 PANTHER PTHR33164:SF4 6 143 3.2E-42 T 22-04-2016 APT61_RS11570 56f3435122296e71bb873bde7ff28a9c 144 SMART SM00347 31 132 3.1E-29 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS11570 56f3435122296e71bb873bde7ff28a9c 144 Pfam PF01047 MarR family 38 96 2.1E-17 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS11570 56f3435122296e71bb873bde7ff28a9c 144 Gene3D G3DSA:1.10.10.10 13 142 1.8E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11570 56f3435122296e71bb873bde7ff28a9c 144 SUPERFAMILY SSF46785 5 143 1.02E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11570 56f3435122296e71bb873bde7ff28a9c 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site APT61_RS11570 56f3435122296e71bb873bde7ff28a9c 144 PANTHER PTHR33164 6 143 3.2E-42 T 22-04-2016 APT61_RS08965 e9cbcc1fbca835cd6cd0911fbfeff612 278 Pfam PF00753 Metallo-beta-lactamase superfamily 31 218 1.2E-16 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS08965 e9cbcc1fbca835cd6cd0911fbfeff612 278 SMART SM00849 31 253 1.8E-15 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS08965 e9cbcc1fbca835cd6cd0911fbfeff612 278 PANTHER PTHR23200 1 275 3.4E-79 T 22-04-2016 APT61_RS08965 e9cbcc1fbca835cd6cd0911fbfeff612 278 PANTHER PTHR23200:SF38 1 275 3.4E-79 T 22-04-2016 APT61_RS08965 e9cbcc1fbca835cd6cd0911fbfeff612 278 SUPERFAMILY SSF56281 1 264 3.14E-29 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS08965 e9cbcc1fbca835cd6cd0911fbfeff612 278 Gene3D G3DSA:3.60.15.10 1 265 7.1E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS19145 a5938500b1612012a378f258c08492ad 407 SUPERFAMILY SSF53649 1 114 3.79E-69 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APT61_RS19145 a5938500b1612012a378f258c08492ad 407 SUPERFAMILY SSF53649 236 406 3.79E-69 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APT61_RS19145 a5938500b1612012a378f258c08492ad 407 PANTHER PTHR21110 2 407 1.6E-166 T 22-04-2016 APT61_RS19145 a5938500b1612012a378f258c08492ad 407 Gene3D G3DSA:3.30.70.1250 114 235 1.4E-53 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APT61_RS19145 a5938500b1612012a378f258c08492ad 407 Gene3D G3DSA:3.40.720.10 240 405 9.2E-73 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APT61_RS19145 a5938500b1612012a378f258c08492ad 407 Gene3D G3DSA:3.40.720.10 1 113 9.2E-73 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APT61_RS19145 a5938500b1612012a378f258c08492ad 407 SUPERFAMILY SSF143856 117 235 1.1E-50 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APT61_RS19145 a5938500b1612012a378f258c08492ad 407 PANTHER PTHR21110:SF0 2 407 1.6E-166 T 22-04-2016 APT61_RS19145 a5938500b1612012a378f258c08492ad 407 PIRSF PIRSF001491 1 407 6.0E-164 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APT61_RS19145 a5938500b1612012a378f258c08492ad 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 55.544 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APT61_RS19145 a5938500b1612012a378f258c08492ad 407 Pfam PF01676 Metalloenzyme superfamily 2 398 1.5E-44 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 APT61_RS19145 a5938500b1612012a378f258c08492ad 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 405 8.6E-204 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 APT61_RS10040 923fda0f52e9dcde0ee109d53da6eaa2 165 Pfam PF01883 Domain of unknown function DUF59 14 74 4.0E-10 T 22-04-2016 IPR002744 Domain of unknown function DUF59 APT61_RS10040 923fda0f52e9dcde0ee109d53da6eaa2 165 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 22 165 9.4E-69 T 22-04-2016 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit UniPathway: UPA00930 APT61_RS10040 923fda0f52e9dcde0ee109d53da6eaa2 165 SUPERFAMILY SSF117916 13 105 2.94E-22 T 22-04-2016 APT61_RS16150 5c771d9e47316d52b7a07fa64052cd73 236 Pfam PF06149 Protein of unknown function (DUF969) 7 225 3.4E-90 T 22-04-2016 IPR010374 Protein of unknown function DUF969 APT61_RS16150 5c771d9e47316d52b7a07fa64052cd73 236 PANTHER PTHR41293 2 229 1.3E-110 T 22-04-2016 APT61_RS16150 5c771d9e47316d52b7a07fa64052cd73 236 PANTHER PTHR41293:SF1 2 229 1.3E-110 T 22-04-2016 APT61_RS16715 0c6c49bfb27bef8d716da8df9e5abbad 316 Pfam PF02780 Transketolase, C-terminal domain 181 286 1.0E-27 T 22-04-2016 IPR033248 Transketolase, C-terminal domain APT61_RS16715 0c6c49bfb27bef8d716da8df9e5abbad 316 Gene3D G3DSA:3.40.50.920 182 311 1.3E-33 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APT61_RS16715 0c6c49bfb27bef8d716da8df9e5abbad 316 SUPERFAMILY SSF52922 175 311 5.1E-32 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APT61_RS16715 0c6c49bfb27bef8d716da8df9e5abbad 316 SUPERFAMILY SSF52518 6 178 2.24E-36 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS16715 0c6c49bfb27bef8d716da8df9e5abbad 316 SMART SM00861 5 170 3.2E-27 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APT61_RS16715 0c6c49bfb27bef8d716da8df9e5abbad 316 PANTHER PTHR11624 10 314 4.3E-75 T 22-04-2016 IPR033247 Transketolase family APT61_RS16715 0c6c49bfb27bef8d716da8df9e5abbad 316 Pfam PF02779 Transketolase, pyrimidine binding domain 13 169 1.2E-17 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APT61_RS16715 0c6c49bfb27bef8d716da8df9e5abbad 316 PANTHER PTHR11624:SF2 10 314 4.3E-75 T 22-04-2016 APT61_RS16715 0c6c49bfb27bef8d716da8df9e5abbad 316 Gene3D G3DSA:3.40.50.970 9 181 3.5E-40 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS12970 72e9d59271d32625c8318028323bd3f9 330 PANTHER PTHR30472 3 330 1.2E-130 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS12970 72e9d59271d32625c8318028323bd3f9 330 SUPERFAMILY SSF81345 3 325 6.93E-82 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS12970 72e9d59271d32625c8318028323bd3f9 330 Gene3D G3DSA:1.10.3470.10 3 327 1.2E-102 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS12970 72e9d59271d32625c8318028323bd3f9 330 Pfam PF01032 FecCD transport family 16 324 6.7E-91 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS12970 72e9d59271d32625c8318028323bd3f9 330 PANTHER PTHR30472:SF3 3 330 1.2E-130 T 22-04-2016 APT61_RS15685 6ee68d57eddc5ed9de37cf84e499c742 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 1.8E-15 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS15685 6ee68d57eddc5ed9de37cf84e499c742 86 PANTHER PTHR34156 2 86 1.1E-33 T 22-04-2016 APT61_RS15685 6ee68d57eddc5ed9de37cf84e499c742 86 Gene3D G3DSA:3.30.1660.10 18 86 6.6E-24 T 22-04-2016 IPR025543 Dodecin-like APT61_RS15685 6ee68d57eddc5ed9de37cf84e499c742 86 PANTHER PTHR34156:SF7 2 86 1.1E-33 T 22-04-2016 APT61_RS15685 6ee68d57eddc5ed9de37cf84e499c742 86 SUPERFAMILY SSF159871 3 86 1.57E-20 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS02730 62fbaf238edc9b0925c2d0a944024d49 321 PANTHER PTHR22911 1 315 3.3E-157 T 22-04-2016 APT61_RS02730 62fbaf238edc9b0925c2d0a944024d49 321 PANTHER PTHR22911:SF55 1 315 3.3E-157 T 22-04-2016 APT61_RS02730 62fbaf238edc9b0925c2d0a944024d49 321 Pfam PF00892 EamA-like transporter family 7 142 1.5E-28 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS02730 62fbaf238edc9b0925c2d0a944024d49 321 Pfam PF00892 EamA-like transporter family 159 291 3.2E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS02730 62fbaf238edc9b0925c2d0a944024d49 321 SUPERFAMILY SSF103481 41 143 5.75E-13 T 22-04-2016 APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 Gene3D G3DSA:1.25.40.10 69 130 3.6E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 Pfam PF04348 LppC putative lipoprotein 42 287 6.0E-48 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 Pfam PF04348 LppC putative lipoprotein 391 710 5.2E-84 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 SUPERFAMILY SSF53822 391 523 7.53E-70 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 SUPERFAMILY SSF53822 258 286 7.53E-70 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 SUPERFAMILY SSF53822 562 714 7.53E-70 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 Gene3D G3DSA:3.40.50.2300 563 638 4.1E-54 T 22-04-2016 APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 Gene3D G3DSA:3.40.50.2300 464 524 4.1E-54 T 22-04-2016 APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 PANTHER PTHR38038:SF1 2 287 8.8E-209 T 22-04-2016 APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 PANTHER PTHR38038:SF1 350 716 8.8E-209 T 22-04-2016 APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 PANTHER PTHR38038 2 287 8.8E-209 T 22-04-2016 APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 PANTHER PTHR38038 350 716 8.8E-209 T 22-04-2016 APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 Gene3D G3DSA:3.40.50.2300 256 286 3.8E-73 T 22-04-2016 APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 Gene3D G3DSA:3.40.50.2300 639 703 3.8E-73 T 22-04-2016 APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 Gene3D G3DSA:3.40.50.2300 393 463 3.8E-73 T 22-04-2016 APT61_RS02915 60233882c8545e5892fd01ddc6729255 716 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 6 710 35.991 T 22-04-2016 IPR007443 Penicillin-binding protein activator LpoA APT61_RS10710 b89e6c099e09e065d41b07cd599fe929 256 Gene3D G3DSA:3.40.50.1820 19 249 1.2E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS10710 b89e6c099e09e065d41b07cd599fe929 256 PANTHER PTHR10992 13 251 1.6E-30 T 22-04-2016 APT61_RS10710 b89e6c099e09e065d41b07cd599fe929 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 4.2E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS10710 b89e6c099e09e065d41b07cd599fe929 256 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 4.2E-5 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS10710 b89e6c099e09e065d41b07cd599fe929 256 SUPERFAMILY SSF53474 15 251 1.66E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS10710 b89e6c099e09e065d41b07cd599fe929 256 Pfam PF12697 Alpha/beta hydrolase family 25 243 9.4E-20 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS08725 62ffb614bffd54a74de3e734301bcea4 228 SMART SM00945 5 119 8.9E-60 T 22-04-2016 IPR016103 ProQ/FinO domain APT61_RS08725 62ffb614bffd54a74de3e734301bcea4 228 Gene3D G3DSA:1.10.1710.10 4 118 2.4E-36 T 22-04-2016 IPR016103 ProQ/FinO domain APT61_RS08725 62ffb614bffd54a74de3e734301bcea4 228 PANTHER PTHR38106 1 228 4.5E-93 T 22-04-2016 APT61_RS08725 62ffb614bffd54a74de3e734301bcea4 228 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 228 30.226 T 22-04-2016 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 APT61_RS08725 62ffb614bffd54a74de3e734301bcea4 228 Pfam PF04352 ProQ/FINO family 8 115 1.4E-42 T 22-04-2016 IPR016103 ProQ/FinO domain APT61_RS08725 62ffb614bffd54a74de3e734301bcea4 228 SUPERFAMILY SSF48657 5 119 5.49E-40 T 22-04-2016 IPR016103 ProQ/FinO domain APT61_RS08725 62ffb614bffd54a74de3e734301bcea4 228 PANTHER PTHR38106:SF1 1 228 4.5E-93 T 22-04-2016 APT61_RS03910 9c3bc7e33d9bda88361af1ca9f5d96cf 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 101 543 2.1E-198 T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APT61_RS03910 9c3bc7e33d9bda88361af1ca9f5d96cf 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 342 356 - T 22-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 APT61_RS03910 9c3bc7e33d9bda88361af1ca9f5d96cf 711 Gene3D G3DSA:3.40.640.10 101 411 1.3E-114 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS03910 9c3bc7e33d9bda88361af1ca9f5d96cf 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 79 1.8E-14 T 22-04-2016 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 APT61_RS03910 9c3bc7e33d9bda88361af1ca9f5d96cf 711 SUPERFAMILY SSF53383 101 559 8.63E-122 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS03910 9c3bc7e33d9bda88361af1ca9f5d96cf 711 PANTHER PTHR11751 102 572 1.8E-213 T 22-04-2016 APT61_RS03910 9c3bc7e33d9bda88361af1ca9f5d96cf 711 Gene3D G3DSA:3.90.1150.10 413 585 2.1E-73 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS03910 9c3bc7e33d9bda88361af1ca9f5d96cf 711 PANTHER PTHR11751:SF425 102 572 1.8E-213 T 22-04-2016 APT61_RS03910 9c3bc7e33d9bda88361af1ca9f5d96cf 711 Gene3D G3DSA:3.40.50.220 1 100 1.6E-30 T 22-04-2016 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 APT61_RS03910 9c3bc7e33d9bda88361af1ca9f5d96cf 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 568 697 3.1E-47 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APT61_RS03910 9c3bc7e33d9bda88361af1ca9f5d96cf 711 SUPERFAMILY SSF52172 1 100 4.17E-26 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS03910 9c3bc7e33d9bda88361af1ca9f5d96cf 711 Gene3D G3DSA:3.90.100.10 586 711 2.8E-38 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APT61_RS03910 9c3bc7e33d9bda88361af1ca9f5d96cf 711 SUPERFAMILY SSF55904 563 711 1.57E-45 T 22-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 APT61_RS03910 9c3bc7e33d9bda88361af1ca9f5d96cf 711 PIRSF PIRSF009393 1 711 4.5E-288 T 22-04-2016 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 APT61_RS19405 39ca3068f58d015be492c45091184293 721 PANTHER PTHR41244 116 720 2.1E-137 T 22-04-2016 APT61_RS19405 39ca3068f58d015be492c45091184293 721 Pfam PF05045 Rhamnan synthesis protein F 467 698 9.6E-42 T 22-04-2016 IPR007739 Rhamnan synthesis F APT61_RS19405 39ca3068f58d015be492c45091184293 721 PANTHER PTHR41244:SF1 116 720 2.1E-137 T 22-04-2016 APT61_RS19405 39ca3068f58d015be492c45091184293 721 Pfam PF14307 Glycosyltransferase WbsX 120 457 7.3E-130 T 22-04-2016 IPR032719 Glycosyltransferase WbsX APT61_RS01600 8cce6ffbafbc8117422190bd1d00ae1e 331 SUPERFAMILY SSF47413 5 62 5.9E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS01600 8cce6ffbafbc8117422190bd1d00ae1e 331 SMART SM00354 5 75 7.2E-26 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS01600 8cce6ffbafbc8117422190bd1d00ae1e 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 7.8E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS01600 8cce6ffbafbc8117422190bd1d00ae1e 331 SUPERFAMILY SSF53822 63 316 8.99E-61 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS01600 8cce6ffbafbc8117422190bd1d00ae1e 331 Gene3D G3DSA:3.40.50.2300 174 330 4.1E-45 T 22-04-2016 APT61_RS01600 8cce6ffbafbc8117422190bd1d00ae1e 331 PANTHER PTHR30146 4 331 5.6E-184 T 22-04-2016 APT61_RS01600 8cce6ffbafbc8117422190bd1d00ae1e 331 Gene3D G3DSA:3.40.50.2300 62 173 2.1E-40 T 22-04-2016 APT61_RS01600 8cce6ffbafbc8117422190bd1d00ae1e 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 311 3.9E-28 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APT61_RS01600 8cce6ffbafbc8117422190bd1d00ae1e 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS01600 8cce6ffbafbc8117422190bd1d00ae1e 331 Gene3D G3DSA:1.10.260.40 4 59 1.1E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS01600 8cce6ffbafbc8117422190bd1d00ae1e 331 PANTHER PTHR30146:SF2 4 331 5.6E-184 T 22-04-2016 APT61_RS19095 114c22658ef6f0cf50b58a6366ade622 171 SUPERFAMILY SSF52972 1 167 1.44E-56 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APT61_RS19095 114c22658ef6f0cf50b58a6366ade622 171 Gene3D G3DSA:3.90.950.10 2 168 3.5E-62 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APT61_RS19095 114c22658ef6f0cf50b58a6366ade622 171 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 7.7E-67 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase APT61_RS19095 114c22658ef6f0cf50b58a6366ade622 171 Pfam PF01931 Protein of unknown function DUF84 7 166 4.4E-54 T 22-04-2016 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 APT61_RS19095 114c22658ef6f0cf50b58a6366ade622 171 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 30.193 T 22-04-2016 IPR002786 Non-canonical purine NTP phosphatase APT61_RS19095 114c22658ef6f0cf50b58a6366ade622 171 PANTHER PTHR34699 1 170 9.8E-102 T 22-04-2016 APT61_RS19095 114c22658ef6f0cf50b58a6366ade622 171 PANTHER PTHR34699:SF3 1 170 9.8E-102 T 22-04-2016 APT61_RS14125 456bb73782bd8e8ae812629145268a5f 194 SUPERFAMILY SSF55729 12 185 3.29E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS14125 456bb73782bd8e8ae812629145268a5f 194 PANTHER PTHR13256 9 190 1.8E-87 T 22-04-2016 APT61_RS14125 456bb73782bd8e8ae812629145268a5f 194 Gene3D G3DSA:3.40.630.30 9 186 1.9E-45 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS14125 456bb73782bd8e8ae812629145268a5f 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 161 1.5E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS14125 456bb73782bd8e8ae812629145268a5f 194 PANTHER PTHR13256:SF24 9 190 1.8E-87 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 Gene3D G3DSA:3.30.300.10 401 525 1.4E-53 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 PANTHER PTHR11922 3 522 2.0E-293 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 1.2E-155 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.6E-6 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 2.6E-6 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.6E-6 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.405 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 Gene3D G3DSA:3.40.50.880 3 222 3.6E-62 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 SUPERFAMILY SSF54810 405 525 1.7E-51 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 Gene3D G3DSA:3.40.50.620 223 399 1.1E-57 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 Pfam PF00117 Glutamine amidotransferase class-I 12 198 6.8E-41 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 PANTHER PTHR11922:SF2 3 522 2.0E-293 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 SUPERFAMILY SSF52402 197 420 1.23E-59 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 Pfam PF02540 NAD synthase 217 256 6.2E-7 T 22-04-2016 IPR022310 NAD/GMP synthase APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 Pfam PF00958 GMP synthase C terminal domain 433 524 7.0E-44 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 9.4E-7 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 9.4E-7 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 9.4E-7 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.1E-7 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.1E-7 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.1E-7 T 22-04-2016 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 6.0E-84 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 APT61_RS06080 74eec8f958248015d7a7deb683db28d3 525 SUPERFAMILY SSF52317 5 204 1.28E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS17625 6c76b50373dd6c195095f93bd9d36c41 388 Gene3D G3DSA:3.40.710.10 37 365 1.2E-66 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS17625 6c76b50373dd6c195095f93bd9d36c41 388 PANTHER PTHR22935 2 358 1.0E-74 T 22-04-2016 APT61_RS17625 6c76b50373dd6c195095f93bd9d36c41 388 Pfam PF00144 Beta-lactamase 49 359 4.5E-62 T 22-04-2016 IPR001466 Beta-lactamase-related APT61_RS17625 6c76b50373dd6c195095f93bd9d36c41 388 PANTHER PTHR22935:SF77 2 358 1.0E-74 T 22-04-2016 APT61_RS17625 6c76b50373dd6c195095f93bd9d36c41 388 SUPERFAMILY SSF56601 35 363 4.35E-65 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS12125 1df2ed0a743cb95fd04d19c9925b9ede 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 3.9E-200 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 APT61_RS12125 1df2ed0a743cb95fd04d19c9925b9ede 462 PIRSF PIRSF000204 1 462 6.7E-238 T 22-04-2016 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 APT61_RS12125 1df2ed0a743cb95fd04d19c9925b9ede 462 SUPERFAMILY SSF52467 289 462 1.45E-77 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS12125 1df2ed0a743cb95fd04d19c9925b9ede 462 PANTHER PTHR10160 4 462 5.8E-255 T 22-04-2016 APT61_RS12125 1df2ed0a743cb95fd04d19c9925b9ede 462 Gene3D G3DSA:3.40.50.1220 289 462 2.0E-92 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS15930 4f725dacbcb5f455a35ee8100b1e8f35 489 SUPERFAMILY SSF52540 254 480 2.55E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15930 4f725dacbcb5f455a35ee8100b1e8f35 489 SUPERFAMILY SSF52540 4 225 4.78E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15930 4f725dacbcb5f455a35ee8100b1e8f35 489 Gene3D G3DSA:3.40.50.300 6 226 1.1E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15930 4f725dacbcb5f455a35ee8100b1e8f35 489 PANTHER PTHR24220 5 384 1.8E-193 T 22-04-2016 APT61_RS15930 4f725dacbcb5f455a35ee8100b1e8f35 489 PANTHER PTHR24220:SF557 5 384 1.8E-193 T 22-04-2016 APT61_RS15930 4f725dacbcb5f455a35ee8100b1e8f35 489 SMART SM00382 28 219 1.0E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15930 4f725dacbcb5f455a35ee8100b1e8f35 489 SMART SM00382 285 483 1.1E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15930 4f725dacbcb5f455a35ee8100b1e8f35 489 Gene3D G3DSA:3.40.50.300 255 468 2.1E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15930 4f725dacbcb5f455a35ee8100b1e8f35 489 Pfam PF00005 ABC transporter 276 429 1.9E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15930 4f725dacbcb5f455a35ee8100b1e8f35 489 Pfam PF00005 ABC transporter 22 163 1.2E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS00060 67aef4313e397e72a3585e5115ef7b3a 501 SUPERFAMILY SSF52540 4 228 2.04E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00060 67aef4313e397e72a3585e5115ef7b3a 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS00060 67aef4313e397e72a3585e5115ef7b3a 501 Pfam PF00005 ABC transporter 22 169 4.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS00060 67aef4313e397e72a3585e5115ef7b3a 501 Pfam PF00005 ABC transporter 268 423 1.6E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS00060 67aef4313e397e72a3585e5115ef7b3a 501 PANTHER PTHR24220 6 378 2.7E-212 T 22-04-2016 APT61_RS00060 67aef4313e397e72a3585e5115ef7b3a 501 Gene3D G3DSA:3.40.50.300 2 234 1.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00060 67aef4313e397e72a3585e5115ef7b3a 501 Gene3D G3DSA:3.40.50.300 267 485 1.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00060 67aef4313e397e72a3585e5115ef7b3a 501 SUPERFAMILY SSF52540 249 480 1.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00060 67aef4313e397e72a3585e5115ef7b3a 501 PANTHER PTHR24220:SF416 6 378 2.7E-212 T 22-04-2016 APT61_RS00060 67aef4313e397e72a3585e5115ef7b3a 501 SMART SM00382 29 231 1.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS00060 67aef4313e397e72a3585e5115ef7b3a 501 SMART SM00382 277 472 1.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS11515 bd8e5edb6af26126816e787058c45086 381 Pfam PF00465 Iron-containing alcohol dehydrogenase 6 370 2.8E-99 T 22-04-2016 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 APT61_RS11515 bd8e5edb6af26126816e787058c45086 381 Gene3D G3DSA:1.20.1090.10 179 377 7.3E-58 T 22-04-2016 APT61_RS11515 bd8e5edb6af26126816e787058c45086 381 SUPERFAMILY SSF56796 5 376 8.77E-98 T 22-04-2016 APT61_RS11515 bd8e5edb6af26126816e787058c45086 381 PANTHER PTHR11496 1 381 1.4E-84 T 22-04-2016 APT61_RS11515 bd8e5edb6af26126816e787058c45086 381 Gene3D G3DSA:3.40.50.1970 3 178 3.6E-40 T 22-04-2016 APT61_RS07880 bf80fdd1a4da31605f48a7f38ae6efa3 474 Pfam PF08411 Exonuclease C-terminal 211 471 6.9E-103 T 22-04-2016 IPR013620 Exonuclease C-terminal GO:0006281|GO:0008852 APT61_RS07880 bf80fdd1a4da31605f48a7f38ae6efa3 474 SMART SM00479 9 202 0.0081 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APT61_RS07880 bf80fdd1a4da31605f48a7f38ae6efa3 474 PANTHER PTHR11046 1 474 2.8E-291 T 22-04-2016 APT61_RS07880 bf80fdd1a4da31605f48a7f38ae6efa3 474 Gene3D G3DSA:3.30.420.10 8 200 2.5E-86 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS07880 bf80fdd1a4da31605f48a7f38ae6efa3 474 PIRSF PIRSF000977 3 474 4.3E-201 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 APT61_RS07880 bf80fdd1a4da31605f48a7f38ae6efa3 474 Pfam PF00929 Exonuclease 12 187 1.6E-29 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APT61_RS07880 bf80fdd1a4da31605f48a7f38ae6efa3 474 SUPERFAMILY SSF53098 9 473 3.95E-139 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS07880 bf80fdd1a4da31605f48a7f38ae6efa3 474 PANTHER PTHR11046:SF2 1 474 2.8E-291 T 22-04-2016 IPR023607 Exodeoxyribonuclease I GO:0004529 APT61_RS04815 6e535e60638209cb9703a17c854e453c 496 Pfam PF02378 Phosphotransferase system, EIIC 11 338 8.3E-70 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS04815 6e535e60638209cb9703a17c854e453c 496 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 5 491 9.1E-184 T 22-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 APT61_RS04815 6e535e60638209cb9703a17c854e453c 496 Gene3D G3DSA:3.30.1360.60 417 494 1.0E-22 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS04815 6e535e60638209cb9703a17c854e453c 496 PANTHER PTHR30009:SF4 4 495 2.2E-199 T 22-04-2016 APT61_RS04815 6e535e60638209cb9703a17c854e453c 496 SUPERFAMILY SSF55604 421 492 5.62E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS04815 6e535e60638209cb9703a17c854e453c 496 PANTHER PTHR30009 4 495 2.2E-199 T 22-04-2016 APT61_RS04815 6e535e60638209cb9703a17c854e453c 496 Pfam PF00367 phosphotransferase system, EIIB 423 453 1.2E-10 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS04815 6e535e60638209cb9703a17c854e453c 496 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 433 450 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS04815 6e535e60638209cb9703a17c854e453c 496 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 397 480 1.0E-14 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS04745 70b4f1e6a1a4b3eb28314cd935ef72b7 373 Gene3D G3DSA:3.10.350.10 115 159 1.5E-10 T 22-04-2016 IPR018392 LysM domain APT61_RS04745 70b4f1e6a1a4b3eb28314cd935ef72b7 373 SMART SM00257 116 160 6.4E-10 T 22-04-2016 IPR018392 LysM domain APT61_RS04745 70b4f1e6a1a4b3eb28314cd935ef72b7 373 PANTHER PTHR21666:SF222 227 371 6.0E-56 T 22-04-2016 APT61_RS04745 70b4f1e6a1a4b3eb28314cd935ef72b7 373 Gene3D G3DSA:2.70.70.10 243 371 3.7E-41 T 22-04-2016 APT61_RS04745 70b4f1e6a1a4b3eb28314cd935ef72b7 373 Pfam PF01551 Peptidase family M23 273 366 1.6E-31 T 22-04-2016 IPR016047 Peptidase M23 APT61_RS04745 70b4f1e6a1a4b3eb28314cd935ef72b7 373 SUPERFAMILY SSF51261 116 370 6.28E-52 T 22-04-2016 IPR011055 Duplicated hybrid motif APT61_RS04745 70b4f1e6a1a4b3eb28314cd935ef72b7 373 PANTHER PTHR21666 227 371 6.0E-56 T 22-04-2016 APT61_RS04745 70b4f1e6a1a4b3eb28314cd935ef72b7 373 Pfam PF01476 LysM domain 117 159 1.7E-9 T 22-04-2016 IPR018392 LysM domain APT61_RS01190 a96df2d3e0b2d2a8c332519ce515ffac 668 Gene3D G3DSA:3.30.70.270 249 406 3.2E-17 T 22-04-2016 APT61_RS01190 a96df2d3e0b2d2a8c332519ce515ffac 668 SMART SM00267 231 398 7.4E-30 T 22-04-2016 IPR000160 GGDEF domain APT61_RS01190 a96df2d3e0b2d2a8c332519ce515ffac 668 Pfam PF00672 HAMP domain 163 230 2.7E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS01190 a96df2d3e0b2d2a8c332519ce515ffac 668 Pfam PF00563 EAL domain 414 647 8.8E-62 T 22-04-2016 IPR001633 EAL domain APT61_RS01190 a96df2d3e0b2d2a8c332519ce515ffac 668 Gene3D G3DSA:3.20.20.450 413 656 5.6E-78 T 22-04-2016 IPR001633 EAL domain APT61_RS01190 a96df2d3e0b2d2a8c332519ce515ffac 668 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 36 154 2.7E-51 T 22-04-2016 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 APT61_RS01190 a96df2d3e0b2d2a8c332519ce515ffac 668 PANTHER PTHR33121 373 656 1.5E-61 T 22-04-2016 APT61_RS01190 a96df2d3e0b2d2a8c332519ce515ffac 668 PANTHER PTHR33121:SF13 373 656 1.5E-61 T 22-04-2016 APT61_RS01190 a96df2d3e0b2d2a8c332519ce515ffac 668 Pfam PF00990 Diguanylate cyclase, GGDEF domain 247 394 1.0E-10 T 22-04-2016 IPR000160 GGDEF domain APT61_RS01190 a96df2d3e0b2d2a8c332519ce515ffac 668 SMART SM00052 408 653 2.6E-103 T 22-04-2016 IPR001633 EAL domain APT61_RS01190 a96df2d3e0b2d2a8c332519ce515ffac 668 SUPERFAMILY SSF55073 248 400 1.73E-16 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS01190 a96df2d3e0b2d2a8c332519ce515ffac 668 SUPERFAMILY SSF141868 413 660 2.22E-73 T 22-04-2016 IPR001633 EAL domain APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 SUPERFAMILY SSF54373 226 319 7.06E-6 T 22-04-2016 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 Gene3D G3DSA:3.50.50.60 2 262 9.9E-37 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 494 1.1E-13 T 22-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 Pfam PF01266 FAD dependent oxidoreductase 5 329 2.0E-45 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 PANTHER PTHR11985:SF1 5 497 7.8E-198 T 22-04-2016 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 1.7E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 1.7E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 1.7E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 1.7E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 1.7E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 1.7E-28 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 SUPERFAMILY SSF51905 312 375 4.75E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 SUPERFAMILY SSF51905 1 260 4.75E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01650 562f5a7669bcf748d7d3f274aa64fada 502 PANTHER PTHR11985 5 497 7.8E-198 T 22-04-2016 APT61_RS20130 d51d7310cf0e0f53d957a82cf3c20882 106 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 30 48 - T 22-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 APT61_RS20130 d51d7310cf0e0f53d957a82cf3c20882 106 PANTHER PTHR33154 1 97 2.7E-28 T 22-04-2016 APT61_RS20130 d51d7310cf0e0f53d957a82cf3c20882 106 Gene3D G3DSA:1.10.10.10 4 84 2.6E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20130 d51d7310cf0e0f53d957a82cf3c20882 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 2.9E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APT61_RS20130 d51d7310cf0e0f53d957a82cf3c20882 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 2.9E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APT61_RS20130 d51d7310cf0e0f53d957a82cf3c20882 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 2.9E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APT61_RS20130 d51d7310cf0e0f53d957a82cf3c20882 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 2.9E-25 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APT61_RS20130 d51d7310cf0e0f53d957a82cf3c20882 106 Pfam PF01022 Bacterial regulatory protein, arsR family 13 58 2.0E-17 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APT61_RS20130 d51d7310cf0e0f53d957a82cf3c20882 106 SUPERFAMILY SSF46785 2 98 4.74E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20130 d51d7310cf0e0f53d957a82cf3c20882 106 SMART SM00418 6 84 5.6E-34 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APT61_RS08515 7100077bd0f929bc052be932807046bb 186 PANTHER PTHR37519:SF1 2 186 2.6E-107 T 22-04-2016 APT61_RS08515 7100077bd0f929bc052be932807046bb 186 SUPERFAMILY SSF54593 2 185 1.52E-67 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS08515 7100077bd0f929bc052be932807046bb 186 PANTHER PTHR37519 2 186 2.6E-107 T 22-04-2016 APT61_RS08515 7100077bd0f929bc052be932807046bb 186 Pfam PF06185 YecM protein 10 185 9.4E-70 T 22-04-2016 IPR010393 Protein of unknown function DUF991 APT61_RS08515 7100077bd0f929bc052be932807046bb 186 Gene3D G3DSA:3.10.180.10 1 185 8.2E-77 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS13705 e6a9fe5eb8005537a5e64610ecc09d03 77 Gene3D G3DSA:3.30.910.10 1 77 1.0E-27 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APT61_RS13705 e6a9fe5eb8005537a5e64610ecc09d03 77 PANTHER PTHR36572:SF2 1 77 1.7E-34 T 22-04-2016 APT61_RS13705 e6a9fe5eb8005537a5e64610ecc09d03 77 PANTHER PTHR36572 1 77 1.7E-34 T 22-04-2016 APT61_RS13705 e6a9fe5eb8005537a5e64610ecc09d03 77 Pfam PF06183 DinI-like family 14 76 4.3E-24 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APT61_RS13705 e6a9fe5eb8005537a5e64610ecc09d03 77 SUPERFAMILY SSF54857 1 77 6.8E-24 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APT61_RS15070 775ae16af2b99ab45a8ba8383620d760 234 SUPERFAMILY SSF55729 2 229 1.91E-92 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS15070 775ae16af2b99ab45a8ba8383620d760 234 PANTHER PTHR30098:SF2 1 233 7.8E-89 T 22-04-2016 APT61_RS15070 775ae16af2b99ab45a8ba8383620d760 234 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 35 214 9.1E-87 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 APT61_RS15070 775ae16af2b99ab45a8ba8383620d760 234 PANTHER PTHR30098 1 233 7.8E-89 T 22-04-2016 APT61_RS15070 775ae16af2b99ab45a8ba8383620d760 234 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 203 5.8E-70 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 APT61_RS15070 775ae16af2b99ab45a8ba8383620d760 234 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 234 97.461 T 22-04-2016 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 APT61_RS18815 83c17b65e74a2b9ce5a7d30804fd5fbf 536 Gene3D G3DSA:1.10.3720.10 293 531 1.4E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS18815 83c17b65e74a2b9ce5a7d30804fd5fbf 536 Gene3D G3DSA:1.10.3720.10 12 267 2.7E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS18815 83c17b65e74a2b9ce5a7d30804fd5fbf 536 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 5.2E-263 T 22-04-2016 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 APT61_RS18815 83c17b65e74a2b9ce5a7d30804fd5fbf 536 PANTHER PTHR30183 1 535 8.0E-283 T 22-04-2016 APT61_RS18815 83c17b65e74a2b9ce5a7d30804fd5fbf 536 SUPERFAMILY SSF161098 11 264 2.43E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS18815 83c17b65e74a2b9ce5a7d30804fd5fbf 536 SUPERFAMILY SSF161098 289 527 1.03E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS18815 83c17b65e74a2b9ce5a7d30804fd5fbf 536 PANTHER PTHR30183:SF8 1 535 8.0E-283 T 22-04-2016 APT61_RS18815 83c17b65e74a2b9ce5a7d30804fd5fbf 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 376 523 3.9E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS18815 83c17b65e74a2b9ce5a7d30804fd5fbf 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 259 1.4E-9 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS13195 3d1b60baa668d101c49744fe93f207a1 387 SUPERFAMILY SSF53850 31 384 5.0E-31 T 22-04-2016 APT61_RS13195 3d1b60baa668d101c49744fe93f207a1 387 PIRSF PIRSF029172 1 387 6.8E-168 T 22-04-2016 IPR027020 Protein ynjB APT61_RS13195 3d1b60baa668d101c49744fe93f207a1 387 Gene3D G3DSA:3.40.190.10 30 150 1.5E-15 T 22-04-2016 APT61_RS13195 3d1b60baa668d101c49744fe93f207a1 387 Gene3D G3DSA:3.40.190.10 312 351 1.5E-15 T 22-04-2016 APT61_RS13195 3d1b60baa668d101c49744fe93f207a1 387 Gene3D G3DSA:3.40.190.10 164 311 1.4E-6 T 22-04-2016 APT61_RS13195 3d1b60baa668d101c49744fe93f207a1 387 PANTHER PTHR30006:SF12 22 205 1.7E-151 T 22-04-2016 APT61_RS13195 3d1b60baa668d101c49744fe93f207a1 387 PANTHER PTHR30006:SF12 223 387 1.7E-151 T 22-04-2016 APT61_RS13195 3d1b60baa668d101c49744fe93f207a1 387 PANTHER PTHR30006 22 205 1.7E-151 T 22-04-2016 APT61_RS13195 3d1b60baa668d101c49744fe93f207a1 387 PANTHER PTHR30006 223 387 1.7E-151 T 22-04-2016 APT61_RS13195 3d1b60baa668d101c49744fe93f207a1 387 Pfam PF13416 Bacterial extracellular solute-binding protein 62 340 3.8E-19 T 22-04-2016 APT61_RS14735 f7f5b0783a4a7638fee3ecbe00c3b532 220 PANTHER PTHR38108:SF1 1 220 8.4E-74 T 22-04-2016 APT61_RS14735 f7f5b0783a4a7638fee3ecbe00c3b532 220 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 213 4.7E-46 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 APT61_RS14735 f7f5b0783a4a7638fee3ecbe00c3b532 220 PANTHER PTHR38108 1 220 8.4E-74 T 22-04-2016 APT61_RS14735 f7f5b0783a4a7638fee3ecbe00c3b532 220 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 216 25.723 T 22-04-2016 IPR018635 Uncharacterised protein family UPF0319 APT61_RS02700 4f1361238359323b77acb2b173e57b79 84 PIRSF PIRSF003113 1 83 1.5E-21 T 22-04-2016 IPR002634 BolA protein APT61_RS02700 4f1361238359323b77acb2b173e57b79 84 PANTHER PTHR12735:SF24 5 84 6.7E-32 T 22-04-2016 APT61_RS02700 4f1361238359323b77acb2b173e57b79 84 PANTHER PTHR12735 5 84 6.7E-32 T 22-04-2016 APT61_RS02700 4f1361238359323b77acb2b173e57b79 84 Pfam PF01722 BolA-like protein 19 74 2.5E-14 T 22-04-2016 IPR002634 BolA protein APT61_RS02700 4f1361238359323b77acb2b173e57b79 84 Gene3D G3DSA:3.30.300.90 1 80 7.8E-27 T 22-04-2016 IPR002634 BolA protein APT61_RS02700 4f1361238359323b77acb2b173e57b79 84 SUPERFAMILY SSF82657 2 82 5.62E-28 T 22-04-2016 IPR002634 BolA protein APT61_RS19885 acfd2427f1c22889abc48cd20c7d598f 655 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 529 540 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS19885 acfd2427f1c22889abc48cd20c7d598f 655 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 162 172 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS19885 acfd2427f1c22889abc48cd20c7d598f 655 SUPERFAMILY SSF143975 47 428 3.27E-92 T 22-04-2016 APT61_RS19885 acfd2427f1c22889abc48cd20c7d598f 655 TIGRFAM TIGR03432 yjhG_yagF: putative dehydratase, YjhG/YagF family 10 645 0.0 T 22-04-2016 IPR017798 Dehydratase YjhG/YagF KEGG: 00196+4.-.-.-|KEGG: 00860+4.-.-.- APT61_RS19885 acfd2427f1c22889abc48cd20c7d598f 655 Pfam PF00920 Dehydratase family 86 603 4.1E-114 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS19885 acfd2427f1c22889abc48cd20c7d598f 655 PANTHER PTHR21000:SF11 85 654 6.3E-243 T 22-04-2016 APT61_RS19885 acfd2427f1c22889abc48cd20c7d598f 655 PANTHER PTHR21000 85 654 6.3E-243 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS19885 acfd2427f1c22889abc48cd20c7d598f 655 SUPERFAMILY SSF52016 441 639 1.18E-38 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT61_RS19170 d7ddb69e5ca701578e771f5c31ca0b56 260 Gene3D G3DSA:3.20.20.140 2 258 8.4E-80 T 22-04-2016 APT61_RS19170 d7ddb69e5ca701578e771f5c31ca0b56 260 Pfam PF01026 TatD related DNase 6 256 2.5E-69 T 22-04-2016 IPR001130 TatD family GO:0016788 APT61_RS19170 d7ddb69e5ca701578e771f5c31ca0b56 260 PANTHER PTHR10060 2 260 1.1E-93 T 22-04-2016 IPR001130 TatD family GO:0016788 APT61_RS19170 d7ddb69e5ca701578e771f5c31ca0b56 260 PIRSF PIRSF005902 1 260 4.6E-74 T 22-04-2016 IPR001130 TatD family GO:0016788 APT61_RS19170 d7ddb69e5ca701578e771f5c31ca0b56 260 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APT61_RS19170 d7ddb69e5ca701578e771f5c31ca0b56 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 129 139 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APT61_RS19170 d7ddb69e5ca701578e771f5c31ca0b56 260 SUPERFAMILY SSF51556 5 258 1.41E-78 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS21685 42fee6d99cd638bd170647e374a1ff05 221 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 170 175 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site APT61_RS21685 42fee6d99cd638bd170647e374a1ff05 221 Hamap MF_00018 UPF0758 protein YicR [yicR]. 1 221 51.348 T 22-04-2016 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily APT61_RS21685 42fee6d99cd638bd170647e374a1ff05 221 Gene3D G3DSA:1.10.150.20 44 74 1.8E-4 T 22-04-2016 APT61_RS21685 42fee6d99cd638bd170647e374a1ff05 221 PANTHER PTHR30471 1 221 9.1E-128 T 22-04-2016 APT61_RS21685 42fee6d99cd638bd170647e374a1ff05 221 PANTHER PTHR30471:SF5 1 221 9.1E-128 T 22-04-2016 APT61_RS21685 42fee6d99cd638bd170647e374a1ff05 221 TIGRFAM TIGR00608 radc: DNA repair protein RadC 9 221 1.6E-87 T 22-04-2016 IPR001405 RadC protein APT61_RS21685 42fee6d99cd638bd170647e374a1ff05 221 SUPERFAMILY SSF47781 17 84 1.68E-8 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APT61_RS21685 42fee6d99cd638bd170647e374a1ff05 221 Pfam PF04002 RadC-like JAB domain 101 219 2.6E-45 T 22-04-2016 IPR025657 RadC-like JAB domain APT61_RS21685 42fee6d99cd638bd170647e374a1ff05 221 Gene3D G3DSA:3.40.140.10 98 221 2.0E-50 T 22-04-2016 APT61_RS05845 c72d2f558d604ab04ab7a39dfa57e85f 518 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 310 338 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APT61_RS05845 c72d2f558d604ab04ab7a39dfa57e85f 518 SUPERFAMILY SSF53850 40 268 1.68E-32 T 22-04-2016 APT61_RS05845 c72d2f558d604ab04ab7a39dfa57e85f 518 PANTHER PTHR21666:SF215 274 496 1.0E-134 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 APT61_RS05845 c72d2f558d604ab04ab7a39dfa57e85f 518 PANTHER PTHR21666 274 496 1.0E-134 T 22-04-2016 APT61_RS05845 c72d2f558d604ab04ab7a39dfa57e85f 518 Gene3D G3DSA:1.10.530.10 288 457 3.3E-34 T 22-04-2016 APT61_RS05845 c72d2f558d604ab04ab7a39dfa57e85f 518 Gene3D G3DSA:3.40.190.10 227 267 1.2E-16 T 22-04-2016 APT61_RS05845 c72d2f558d604ab04ab7a39dfa57e85f 518 Gene3D G3DSA:3.40.190.10 41 129 1.2E-16 T 22-04-2016 APT61_RS05845 c72d2f558d604ab04ab7a39dfa57e85f 518 SMART SM00062 44 269 2.3E-41 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS05845 c72d2f558d604ab04ab7a39dfa57e85f 518 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 51 268 5.6E-27 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS05845 c72d2f558d604ab04ab7a39dfa57e85f 518 SUPERFAMILY SSF53955 433 444 5.7E-33 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS05845 c72d2f558d604ab04ab7a39dfa57e85f 518 SUPERFAMILY SSF53955 246 398 5.7E-33 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS05845 c72d2f558d604ab04ab7a39dfa57e85f 518 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 472 46.366 T 22-04-2016 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 APT61_RS05845 c72d2f558d604ab04ab7a39dfa57e85f 518 Pfam PF01464 Transglycosylase SLT domain 297 404 9.6E-22 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 APT61_RS18015 b98630db2b85f21a2ba08b4edfede2f9 256 PANTHER PTHR23088 1 252 9.4E-163 T 22-04-2016 APT61_RS18015 b98630db2b85f21a2ba08b4edfede2f9 256 PANTHER PTHR23088:SF28 1 252 9.4E-163 T 22-04-2016 APT61_RS18015 b98630db2b85f21a2ba08b4edfede2f9 256 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 3.5E-31 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APT61_RS18015 b98630db2b85f21a2ba08b4edfede2f9 256 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site APT61_RS18015 b98630db2b85f21a2ba08b4edfede2f9 256 SUPERFAMILY SSF56317 4 249 7.72E-61 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APT61_RS18015 b98630db2b85f21a2ba08b4edfede2f9 256 Gene3D G3DSA:3.60.110.10 4 252 1.2E-60 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APT61_RS12625 47789c108b0551e7249529ce0025a571 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 5.83E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS12625 47789c108b0551e7249529ce0025a571 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 5.83E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS12625 47789c108b0551e7249529ce0025a571 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 5.83E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS12625 47789c108b0551e7249529ce0025a571 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 5.83E-26 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS12625 47789c108b0551e7249529ce0025a571 146 SMART SM00347 24 125 3.7E-30 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS12625 47789c108b0551e7249529ce0025a571 146 PANTHER PTHR33164 1 146 2.4E-27 T 22-04-2016 APT61_RS12625 47789c108b0551e7249529ce0025a571 146 PANTHER PTHR33164:SF16 1 146 2.4E-27 T 22-04-2016 APT61_RS12625 47789c108b0551e7249529ce0025a571 146 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 3 145 41.513 T 22-04-2016 IPR023071 Transcriptional regulator, SlyA APT61_RS12625 47789c108b0551e7249529ce0025a571 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site APT61_RS12625 47789c108b0551e7249529ce0025a571 146 SUPERFAMILY SSF46785 3 142 1.6E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS12625 47789c108b0551e7249529ce0025a571 146 Gene3D G3DSA:1.10.10.10 2 140 8.0E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS12625 47789c108b0551e7249529ce0025a571 146 Pfam PF01047 MarR family 31 89 1.2E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 PANTHER PTHR10283 302 353 2.2E-241 T 22-04-2016 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 PANTHER PTHR10283:SF12 302 353 2.2E-241 T 22-04-2016 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 SUPERFAMILY SSF116726 231 293 1.57E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 PANTHER PTHR10283:SF12 448 610 2.2E-241 T 22-04-2016 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 Pfam PF02080 TrkA-C domain 231 303 1.3E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 Pfam PF02080 TrkA-C domain 326 387 7.0E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 PANTHER PTHR10283 448 610 2.2E-241 T 22-04-2016 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 Pfam PF03600 Citrate transporter 16 197 2.2E-35 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 Pfam PF03600 Citrate transporter 430 608 6.7E-20 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 PANTHER PTHR10283 244 268 2.2E-241 T 22-04-2016 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 PANTHER PTHR10283 2 225 2.2E-241 T 22-04-2016 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 22-04-2016 IPR031312 Sodium/sulphate symporter, conserved site APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 Gene3D G3DSA:3.30.70.1450 322 395 5.2E-19 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 Gene3D G3DSA:3.30.70.1450 232 311 1.3E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 PANTHER PTHR10283:SF12 244 268 2.2E-241 T 22-04-2016 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 PANTHER PTHR10283:SF12 2 225 2.2E-241 T 22-04-2016 APT61_RS06810 21899f83a7467ba68928ce748b1644c4 610 SUPERFAMILY SSF116726 321 392 4.45E-15 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS15540 79d8ad752e08dd1001fcf47452a206b8 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 5.7E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15540 79d8ad752e08dd1001fcf47452a206b8 306 SUPERFAMILY SSF161098 90 288 1.57E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15540 79d8ad752e08dd1001fcf47452a206b8 306 PANTHER PTHR30465:SF59 1 305 2.8E-200 T 22-04-2016 APT61_RS15540 79d8ad752e08dd1001fcf47452a206b8 306 PANTHER PTHR30465 1 305 2.8E-200 T 22-04-2016 APT61_RS15540 79d8ad752e08dd1001fcf47452a206b8 306 Gene3D G3DSA:1.10.3720.10 87 301 1.5E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS12305 0b27b0d6bf2f50eeefc14cf2905535c5 310 SUPERFAMILY SSF48726 231 303 1.42E-10 T 22-04-2016 IPR007110 Immunoglobulin-like domain GO:0005515 APT61_RS12305 0b27b0d6bf2f50eeefc14cf2905535c5 310 Gene3D G3DSA:2.60.40.10 232 309 9.2E-12 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS12305 0b27b0d6bf2f50eeefc14cf2905535c5 310 SMART SM00409 232 310 0.005 T 22-04-2016 IPR003599 Immunoglobulin subtype APT61_RS12305 0b27b0d6bf2f50eeefc14cf2905535c5 310 Pfam PF08813 Phage tail tube protein, TTP 52 212 3.2E-45 T 22-04-2016 IPR014918 Phage tail tube protein 3 APT61_RS12305 0b27b0d6bf2f50eeefc14cf2905535c5 310 Pfam PF13927 Immunoglobulin domain 234 293 1.6E-7 T 22-04-2016 APT61_RS09430 a0433c80b017eb75f2d6d8fabe562445 486 SMART SM00155 399 426 8.2E-6 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APT61_RS09430 a0433c80b017eb75f2d6d8fabe562445 486 SMART SM00155 219 246 3.2E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APT61_RS09430 a0433c80b017eb75f2d6d8fabe562445 486 PANTHER PTHR21248 18 486 1.6E-297 T 22-04-2016 APT61_RS09430 a0433c80b017eb75f2d6d8fabe562445 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 3.4E-219 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 APT61_RS09430 a0433c80b017eb75f2d6d8fabe562445 486 Gene3D G3DSA:3.30.870.10 111 316 7.8E-34 T 22-04-2016 APT61_RS09430 a0433c80b017eb75f2d6d8fabe562445 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 9.0E-8 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal APT61_RS09430 a0433c80b017eb75f2d6d8fabe562445 486 PANTHER PTHR21248:SF9 18 486 1.6E-297 T 22-04-2016 APT61_RS09430 a0433c80b017eb75f2d6d8fabe562445 486 Gene3D G3DSA:3.30.870.10 317 460 1.0E-34 T 22-04-2016 APT61_RS09430 a0433c80b017eb75f2d6d8fabe562445 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 51.503 T 22-04-2016 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 APT61_RS09430 a0433c80b017eb75f2d6d8fabe562445 486 Pfam PF13091 PLD-like domain 332 442 8.5E-23 T 22-04-2016 IPR025202 Phospholipase D-like domain APT61_RS09430 a0433c80b017eb75f2d6d8fabe562445 486 Pfam PF13091 PLD-like domain 134 244 5.2E-12 T 22-04-2016 IPR025202 Phospholipase D-like domain APT61_RS09430 a0433c80b017eb75f2d6d8fabe562445 486 SUPERFAMILY SSF56024 274 473 1.3E-47 T 22-04-2016 APT61_RS09430 a0433c80b017eb75f2d6d8fabe562445 486 SUPERFAMILY SSF56024 66 315 5.97E-45 T 22-04-2016 APT61_RS10600 7391b88c566433ee90d8b47ee54045e1 530 Gene3D G3DSA:3.10.105.10 285 500 3.5E-70 T 22-04-2016 APT61_RS10600 7391b88c566433ee90d8b47ee54045e1 530 PIRSF PIRSF002741 14 530 5.0E-116 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APT61_RS10600 7391b88c566433ee90d8b47ee54045e1 530 SUPERFAMILY SSF53850 24 529 3.8E-157 T 22-04-2016 APT61_RS10600 7391b88c566433ee90d8b47ee54045e1 530 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 74 96 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site APT61_RS10600 7391b88c566433ee90d8b47ee54045e1 530 PANTHER PTHR30290 9 530 5.0E-210 T 22-04-2016 APT61_RS10600 7391b88c566433ee90d8b47ee54045e1 530 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 69 449 3.7E-105 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS10600 7391b88c566433ee90d8b47ee54045e1 530 Gene3D G3DSA:3.90.76.10 34 214 2.4E-47 T 22-04-2016 APT61_RS10600 7391b88c566433ee90d8b47ee54045e1 530 PANTHER PTHR30290:SF14 9 530 5.0E-210 T 22-04-2016 APT61_RS03660 646cf61ae3376c4eb832c0798fdc639f 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 87 7.5E-25 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain APT61_RS03660 646cf61ae3376c4eb832c0798fdc639f 104 PANTHER PTHR33336 1 102 1.4E-20 T 22-04-2016 APT61_RS03660 646cf61ae3376c4eb832c0798fdc639f 104 SUPERFAMILY SSF54909 1 98 8.05E-29 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS03660 646cf61ae3376c4eb832c0798fdc639f 104 Gene3D G3DSA:3.30.70.900 1 101 2.7E-37 T 22-04-2016 APT61_RS19870 190b27ac3cba42c01dabf5fa68a4767c 252 SMART SM00346 4 94 1.9E-36 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APT61_RS19870 190b27ac3cba42c01dabf5fa68a4767c 252 SUPERFAMILY SSF55781 63 250 9.32E-55 T 22-04-2016 IPR029016 GAF domain-like APT61_RS19870 190b27ac3cba42c01dabf5fa68a4767c 252 PANTHER PTHR30136:SF7 3 250 4.9E-107 T 22-04-2016 APT61_RS19870 190b27ac3cba42c01dabf5fa68a4767c 252 Pfam PF01614 Bacterial transcriptional regulator 123 246 1.6E-44 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal APT61_RS19870 190b27ac3cba42c01dabf5fa68a4767c 252 SUPERFAMILY SSF46785 4 77 2.25E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19870 190b27ac3cba42c01dabf5fa68a4767c 252 PANTHER PTHR30136 3 250 4.9E-107 T 22-04-2016 APT61_RS19870 190b27ac3cba42c01dabf5fa68a4767c 252 Gene3D G3DSA:1.10.10.10 4 75 2.9E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19870 190b27ac3cba42c01dabf5fa68a4767c 252 Gene3D G3DSA:3.30.450.40 76 250 8.5E-61 T 22-04-2016 IPR029016 GAF domain-like APT61_RS19870 190b27ac3cba42c01dabf5fa68a4767c 252 Pfam PF09339 IclR helix-turn-helix domain 6 57 6.0E-18 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 SUPERFAMILY SSF52440 1 112 5.04E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 454 771 1.7E-93 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 109 9.4E-42 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 SUPERFAMILY SSF160467 801 891 2.62E-17 T 22-04-2016 APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 SUPERFAMILY SSF56059 83 354 6.89E-68 T 22-04-2016 APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 SUPERFAMILY SSF50891 915 1046 7.21E-26 T 22-04-2016 IPR029000 Cyclophilin-like domain APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 Gene3D G3DSA:3.40.50.20 1 129 1.7E-44 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 TIGRFAM TIGR02712 urea_carbox: urea carboxylase 3 1197 0.0 T 22-04-2016 IPR014084 Urea carboxylase KEGG: 00220+3.5.1.54+6.3.4.6|KEGG: 00791+3.5.1.54+6.3.4.6|MetaCyc: PWY-5169|MetaCyc: PWY-5703|UniPathway: UPA00258|UniPathway: UPA00258 APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 SUPERFAMILY SSF50891 632 756 1.02E-28 T 22-04-2016 IPR029000 Cyclophilin-like domain APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 Gene3D G3DSA:2.40.50.100 1127 1197 2.7E-22 T 22-04-2016 APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 PANTHER PTHR18866 1094 1197 4.4E-266 T 22-04-2016 APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 PANTHER PTHR18866 5 544 4.4E-266 T 22-04-2016 APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 SUPERFAMILY SSF51246 332 447 1.15E-33 T 22-04-2016 IPR011054 Rudiment single hybrid motif APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 Gene3D G3DSA:3.30.1360.40 801 875 1.6E-23 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 SUPERFAMILY SSF51230 1125 1197 3.27E-18 T 22-04-2016 IPR011053 Single hybrid motif APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 SMART SM00797 477 767 1.1E-159 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 Gene3D G3DSA:3.30.470.20 202 446 3.8E-82 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 Pfam PF02785 Biotin carboxylase C-terminal domain 338 446 2.7E-30 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 Pfam PF02626 Allophanate hydrolase subunit 2 478 750 4.6E-84 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 319 4.3E-60 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 Gene3D G3DSA:3.30.1490.20 130 201 5.9E-23 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 PANTHER PTHR18866:SF91 1094 1197 4.4E-266 T 22-04-2016 APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 PANTHER PTHR18866:SF91 5 544 4.4E-266 T 22-04-2016 APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 SMART SM00796 798 1030 2.1E-108 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 Pfam PF00364 Biotin-requiring enzyme 1137 1196 2.1E-14 T 22-04-2016 IPR000089 Biotin/lipoyl attachment APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 SMART SM00878 338 446 1.8E-45 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 Pfam PF02682 Allophanate hydrolase subunit 1 801 1016 1.4E-47 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 Gene3D G3DSA:2.40.100.10 632 765 9.0E-30 T 22-04-2016 IPR029000 Cyclophilin-like domain APT61_RS11770 d8e073ed57690383df06c9920479243d 1200 Gene3D G3DSA:2.40.100.10 915 1053 1.3E-43 T 22-04-2016 IPR029000 Cyclophilin-like domain APT61_RS20090 945a87fff2a388a692fca26e8cbb2f5b 577 Gene3D G3DSA:2.40.160.50 303 574 1.3E-21 T 22-04-2016 APT61_RS20090 945a87fff2a388a692fca26e8cbb2f5b 577 PANTHER PTHR12815:SF12 7 577 1.8E-286 T 22-04-2016 APT61_RS20090 945a87fff2a388a692fca26e8cbb2f5b 577 Pfam PF07244 Surface antigen variable number repeat 189 246 2.8E-9 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 APT61_RS20090 945a87fff2a388a692fca26e8cbb2f5b 577 Pfam PF01103 Surface antigen 281 574 4.1E-34 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 APT61_RS20090 945a87fff2a388a692fca26e8cbb2f5b 577 PANTHER PTHR12815 7 577 1.8E-286 T 22-04-2016 APT61_RS00960 6cf54ce6ad4b1c01d03cfa849b749143 107 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 22-04-2016 IPR020895 Frataxin conserved site APT61_RS00960 6cf54ce6ad4b1c01d03cfa849b749143 107 SMART SM01219 1 106 1.5E-56 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APT61_RS00960 6cf54ce6ad4b1c01d03cfa849b749143 107 PANTHER PTHR16821 1 107 1.6E-41 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APT61_RS00960 6cf54ce6ad4b1c01d03cfa849b749143 107 SUPERFAMILY SSF55387 1 105 3.14E-40 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APT61_RS00960 6cf54ce6ad4b1c01d03cfa849b749143 107 Gene3D G3DSA:3.30.920.10 1 105 8.5E-37 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APT61_RS00960 6cf54ce6ad4b1c01d03cfa849b749143 107 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 1.1E-43 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APT61_RS00960 6cf54ce6ad4b1c01d03cfa849b749143 107 Pfam PF01491 Frataxin-like domain 1 103 5.2E-30 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APT61_RS00960 6cf54ce6ad4b1c01d03cfa849b749143 107 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 29.236 T 22-04-2016 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 APT61_RS13920 0338e670b31b9bc8b90b5b8d82f21f96 274 SUPERFAMILY SSF56112 31 271 1.9E-27 T 22-04-2016 IPR011009 Protein kinase-like domain APT61_RS13920 0338e670b31b9bc8b90b5b8d82f21f96 274 Pfam PF01636 Phosphotransferase enzyme family 31 218 8.3E-14 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase APT61_RS13920 0338e670b31b9bc8b90b5b8d82f21f96 274 Gene3D G3DSA:3.90.1200.10 128 271 4.3E-12 T 22-04-2016 APT61_RS12825 dd59e4ed366a1ed2ceacad630a3200c3 211 Gene3D G3DSA:3.40.1050.10 1 204 1.4E-69 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS12825 dd59e4ed366a1ed2ceacad630a3200c3 211 PANTHER PTHR11002:SF13 1 208 1.3E-75 T 22-04-2016 APT61_RS12825 dd59e4ed366a1ed2ceacad630a3200c3 211 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS12825 dd59e4ed366a1ed2ceacad630a3200c3 211 Pfam PF00484 Carbonic anhydrase 34 189 6.9E-48 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS12825 dd59e4ed366a1ed2ceacad630a3200c3 211 SMART SM00947 27 193 7.5E-63 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS12825 dd59e4ed366a1ed2ceacad630a3200c3 211 PANTHER PTHR11002 1 208 1.3E-75 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS12825 dd59e4ed366a1ed2ceacad630a3200c3 211 SUPERFAMILY SSF53056 1 203 3.66E-65 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS12825 dd59e4ed366a1ed2ceacad630a3200c3 211 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS00680 c7770a647be693cbc8b100e08c13fc55 257 SUPERFAMILY SSF53633 2 255 1.23E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS00680 c7770a647be693cbc8b100e08c13fc55 257 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 257 25.726 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS00680 c7770a647be693cbc8b100e08c13fc55 257 PANTHER PTHR23342 1 256 8.3E-96 T 22-04-2016 APT61_RS00680 c7770a647be693cbc8b100e08c13fc55 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 233 1.2E-75 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS00680 c7770a647be693cbc8b100e08c13fc55 257 Gene3D G3DSA:3.40.1160.10 2 256 1.3E-79 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS00680 c7770a647be693cbc8b100e08c13fc55 257 Pfam PF00696 Amino acid kinase family 4 234 1.0E-38 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS00680 c7770a647be693cbc8b100e08c13fc55 257 PIRSF PIRSF000728 1 257 1.9E-72 T 22-04-2016 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 4.7E-146 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 SMART SM00881 4 100 4.2E-37 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 22-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 Pfam PF00549 CoA-ligase 151 271 2.2E-20 T 22-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 Gene3D G3DSA:3.40.50.720 2 119 6.8E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 PIRSF PIRSF001553 1 289 9.6E-135 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.5E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.5E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.5E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.5E-39 T 22-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 Pfam PF02629 CoA binding domain 6 99 2.9E-31 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 PANTHER PTHR11117 1 289 1.5E-197 T 22-04-2016 APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 SUPERFAMILY SSF51735 1 122 2.28E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 SUPERFAMILY SSF52210 123 286 9.29E-57 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS16090 c24a663ca345d3f2a22a939b1df579d5 289 Gene3D G3DSA:3.40.50.261 120 287 9.9E-78 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS03865 0e9a300f284bcec1b95b4266ca0c8270 399 PANTHER PTHR13794 176 398 1.8E-99 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APT61_RS03865 0e9a300f284bcec1b95b4266ca0c8270 399 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 17 114 6.8E-26 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APT61_RS03865 0e9a300f284bcec1b95b4266ca0c8270 399 Pfam PF13378 Enolase C-terminal domain-like 143 372 4.3E-41 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS03865 0e9a300f284bcec1b95b4266ca0c8270 399 PANTHER PTHR13794 6 152 1.8E-99 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APT61_RS03865 0e9a300f284bcec1b95b4266ca0c8270 399 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 89 114 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APT61_RS03865 0e9a300f284bcec1b95b4266ca0c8270 399 SUPERFAMILY SSF54826 15 116 7.66E-30 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS03865 0e9a300f284bcec1b95b4266ca0c8270 399 PANTHER PTHR13794:SF61 176 398 1.8E-99 T 22-04-2016 APT61_RS03865 0e9a300f284bcec1b95b4266ca0c8270 399 PANTHER PTHR13794:SF61 6 152 1.8E-99 T 22-04-2016 APT61_RS03865 0e9a300f284bcec1b95b4266ca0c8270 399 SMART SM00922 132 252 9.6E-10 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APT61_RS03865 0e9a300f284bcec1b95b4266ca0c8270 399 SUPERFAMILY SSF51604 102 379 8.91E-71 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS03865 0e9a300f284bcec1b95b4266ca0c8270 399 Gene3D G3DSA:3.20.20.120 121 366 2.2E-74 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS03865 0e9a300f284bcec1b95b4266ca0c8270 399 Gene3D G3DSA:3.30.390.10 16 120 2.7E-44 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS21570 8e4af62ec37860daa88e4d5674783531 143 SUPERFAMILY SSF52821 16 142 7.2E-30 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS21570 8e4af62ec37860daa88e4d5674783531 143 Gene3D G3DSA:3.40.250.10 23 142 2.1E-26 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS21570 8e4af62ec37860daa88e4d5674783531 143 PANTHER PTHR12231:SF138 39 143 1.4E-47 T 22-04-2016 APT61_RS21570 8e4af62ec37860daa88e4d5674783531 143 Pfam PF00581 Rhodanese-like domain 43 133 1.1E-16 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS21570 8e4af62ec37860daa88e4d5674783531 143 SMART SM00450 40 138 1.8E-21 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS21570 8e4af62ec37860daa88e4d5674783531 143 PANTHER PTHR12231 39 143 1.4E-47 T 22-04-2016 APT61_RS19920 f7ea46dd68461bfe64e585aa98894ec7 485 SUPERFAMILY SSF81296 22 191 2.94E-63 T 22-04-2016 IPR014756 Immunoglobulin E-set APT61_RS19920 f7ea46dd68461bfe64e585aa98894ec7 485 PANTHER PTHR34823:SF1 6 484 4.3E-134 T 22-04-2016 APT61_RS19920 f7ea46dd68461bfe64e585aa98894ec7 485 Gene3D G3DSA:2.70.50.50 22 190 7.7E-67 T 22-04-2016 APT61_RS19920 f7ea46dd68461bfe64e585aa98894ec7 485 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 22 187 2.0E-37 T 22-04-2016 IPR004302 Chitin-binding protein, N-terminal APT61_RS19920 f7ea46dd68461bfe64e585aa98894ec7 485 PANTHER PTHR34823 6 484 4.3E-134 T 22-04-2016 APT61_RS18220 31e4dc5b54511421b9d0a6e40a93cace 810 PANTHER PTHR12815 700 810 0.0 T 22-04-2016 APT61_RS18220 31e4dc5b54511421b9d0a6e40a93cace 810 PANTHER PTHR12815 5 673 0.0 T 22-04-2016 APT61_RS18220 31e4dc5b54511421b9d0a6e40a93cace 810 Pfam PF07244 Surface antigen variable number repeat 92 172 6.6E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 APT61_RS18220 31e4dc5b54511421b9d0a6e40a93cace 810 Pfam PF07244 Surface antigen variable number repeat 266 344 1.3E-12 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 APT61_RS18220 31e4dc5b54511421b9d0a6e40a93cace 810 Pfam PF07244 Surface antigen variable number repeat 348 421 5.5E-14 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 APT61_RS18220 31e4dc5b54511421b9d0a6e40a93cace 810 Pfam PF07244 Surface antigen variable number repeat 176 263 2.2E-16 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 APT61_RS18220 31e4dc5b54511421b9d0a6e40a93cace 810 Gene3D G3DSA:2.40.160.50 705 807 1.6E-19 T 22-04-2016 APT61_RS18220 31e4dc5b54511421b9d0a6e40a93cace 810 Gene3D G3DSA:2.40.160.50 403 669 1.6E-19 T 22-04-2016 APT61_RS18220 31e4dc5b54511421b9d0a6e40a93cace 810 Pfam PF01103 Surface antigen 448 810 1.1E-101 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 APT61_RS18220 31e4dc5b54511421b9d0a6e40a93cace 810 PANTHER PTHR12815:SF11 700 810 0.0 T 22-04-2016 APT61_RS18220 31e4dc5b54511421b9d0a6e40a93cace 810 PANTHER PTHR12815:SF11 5 673 0.0 T 22-04-2016 APT61_RS18220 31e4dc5b54511421b9d0a6e40a93cace 810 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 810 1.5E-286 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APT61_RS18220 31e4dc5b54511421b9d0a6e40a93cace 810 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 810 26.103 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APT61_RS18220 31e4dc5b54511421b9d0a6e40a93cace 810 PIRSF PIRSF006076 1 810 1.0E-256 T 22-04-2016 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 APT61_RS16460 999265ff36555b810e80f1581adc5ffc 262 PANTHER PTHR23088 1 256 8.3E-79 T 22-04-2016 APT61_RS16460 999265ff36555b810e80f1581adc5ffc 262 PANTHER PTHR23088:SF27 1 256 8.3E-79 T 22-04-2016 APT61_RS16460 999265ff36555b810e80f1581adc5ffc 262 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 143 163 - T 22-04-2016 IPR001110 Uncharacterised protein family UPF0012, conserved site APT61_RS16460 999265ff36555b810e80f1581adc5ffc 262 SUPERFAMILY SSF56317 1 257 7.98E-60 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APT61_RS16460 999265ff36555b810e80f1581adc5ffc 262 Pfam PF00795 Carbon-nitrogen hydrolase 3 246 9.6E-38 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APT61_RS16460 999265ff36555b810e80f1581adc5ffc 262 Gene3D G3DSA:3.60.110.10 1 256 6.1E-65 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APT61_RS07680 74d287d1a2821c1ca52e9e16158957c2 405 Pfam PF13439 Glycosyltransferase Family 4 13 224 9.4E-8 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT61_RS07680 74d287d1a2821c1ca52e9e16158957c2 405 Pfam PF00534 Glycosyl transferases group 1 287 347 2.1E-6 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APT61_RS07680 74d287d1a2821c1ca52e9e16158957c2 405 TIGRFAM TIGR04015 WcaC: colanic acid biosynthesis glycosyltransferase WcaC 1 405 1.0E-267 T 22-04-2016 IPR023916 Colanic acid biosynthesis, glycosyl transferase, WcaC UniPathway: UPA00936 APT61_RS07680 74d287d1a2821c1ca52e9e16158957c2 405 Gene3D G3DSA:3.40.50.2000 296 357 2.8E-4 T 22-04-2016 APT61_RS07680 74d287d1a2821c1ca52e9e16158957c2 405 SUPERFAMILY SSF53756 11 405 5.76E-26 T 22-04-2016 APT61_RS07680 74d287d1a2821c1ca52e9e16158957c2 405 PANTHER PTHR12526 182 405 6.4E-32 T 22-04-2016 APT61_RS07680 74d287d1a2821c1ca52e9e16158957c2 405 PANTHER PTHR12526 1 158 6.4E-32 T 22-04-2016 APT61_RS07680 74d287d1a2821c1ca52e9e16158957c2 405 PANTHER PTHR12526:SF397 182 405 6.4E-32 T 22-04-2016 APT61_RS07680 74d287d1a2821c1ca52e9e16158957c2 405 PANTHER PTHR12526:SF397 1 158 6.4E-32 T 22-04-2016 APT61_RS03895 5d4f3e03bb306dc1de6916d7dd392911 213 Pfam PF01712 Deoxynucleoside kinase 5 177 7.5E-23 T 22-04-2016 IPR031314 Deoxynucleoside kinase domain APT61_RS03895 5d4f3e03bb306dc1de6916d7dd392911 213 PANTHER PTHR10513 2 172 1.4E-20 T 22-04-2016 APT61_RS03895 5d4f3e03bb306dc1de6916d7dd392911 213 SUPERFAMILY SSF52540 1 175 1.45E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03895 5d4f3e03bb306dc1de6916d7dd392911 213 Gene3D G3DSA:3.40.50.300 1 185 5.5E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03895 5d4f3e03bb306dc1de6916d7dd392911 213 PIRSF PIRSF000705 1 212 3.0E-21 T 22-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PANTHER PTHR11014:SF54 204 279 1.4E-205 T 22-04-2016 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PANTHER PTHR11014:SF54 1 185 1.4E-205 T 22-04-2016 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PANTHER PTHR11014 204 279 1.4E-205 T 22-04-2016 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PANTHER PTHR11014 1 185 1.4E-205 T 22-04-2016 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 Gene3D G3DSA:3.40.630.10 397 483 9.2E-109 T 22-04-2016 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 Gene3D G3DSA:3.40.630.10 3 181 9.2E-109 T 22-04-2016 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 6.0E-182 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 SUPERFAMILY SSF53187 10 182 8.38E-65 T 22-04-2016 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 SUPERFAMILY SSF53187 397 481 8.38E-65 T 22-04-2016 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 Pfam PF01546 Peptidase family M20/M25/M40 73 480 8.3E-21 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 Gene3D G3DSA:3.30.70.360 245 303 9.3E-4 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PANTHER PTHR11014:SF54 330 485 1.4E-205 T 22-04-2016 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PANTHER PTHR11014 330 485 1.4E-205 T 22-04-2016 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PIRSF PIRSF016599 1 485 3.9E-211 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 3.1E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 3.1E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 3.1E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 3.1E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 3.1E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 3.1E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 3.1E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 3.1E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 3.1E-103 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 APT61_RS17945 9013e59b9f713ea21bdb2aaa937c8b26 485 Pfam PF07687 Peptidase dimerisation domain 202 293 4.5E-7 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS09755 1f6dc06953e9171643e3c6c523b2f669 349 PANTHER PTHR39342 1 347 2.9E-138 T 22-04-2016 APT61_RS09755 1f6dc06953e9171643e3c6c523b2f669 349 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 54 341 2.7E-142 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 APT61_RS09755 1f6dc06953e9171643e3c6c523b2f669 349 PANTHER PTHR39342:SF1 1 347 2.9E-138 T 22-04-2016 APT61_RS09755 1f6dc06953e9171643e3c6c523b2f669 349 Pfam PF05128 Domain of unknown function (DUF697) 183 341 1.3E-54 T 22-04-2016 IPR021147 Protein of unknown function DUF697 APT61_RS09755 1f6dc06953e9171643e3c6c523b2f669 349 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 347 39.476 T 22-04-2016 IPR006507 Uncharacterised protein family UPF0283 APT61_RS16610 0a8700caacdbb335ed504f19246b84db 137 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 134 3.0E-45 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain APT61_RS16610 0a8700caacdbb335ed504f19246b84db 137 SUPERFAMILY SSF54637 1 136 1.56E-32 T 22-04-2016 IPR029069 HotDog domain APT61_RS16610 0a8700caacdbb335ed504f19246b84db 137 Pfam PF03061 Thioesterase superfamily 50 127 2.5E-17 T 22-04-2016 IPR006683 Thioesterase domain APT61_RS16610 0a8700caacdbb335ed504f19246b84db 137 Hamap MF_00907 Proofreading thioesterase EntH [entH]. 1 137 50.583 T 22-04-2016 IPR026576 Proofreading thioesterase EntH GO:0009239|GO:0016790 UniPathway: UPA00017 APT61_RS16610 0a8700caacdbb335ed504f19246b84db 137 PANTHER PTHR12418 1 136 6.9E-90 T 22-04-2016 APT61_RS16610 0a8700caacdbb335ed504f19246b84db 137 PANTHER PTHR12418:SF34 1 136 6.9E-90 T 22-04-2016 APT61_RS16610 0a8700caacdbb335ed504f19246b84db 137 Gene3D G3DSA:3.10.129.10 1 136 3.4E-50 T 22-04-2016 IPR029069 HotDog domain APT61_RS21955 4660c019d96cb60d7ddc89b4490710ff 562 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 181 1.1E-59 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APT61_RS21955 4660c019d96cb60d7ddc89b4490710ff 562 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 334 6.5E-45 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APT61_RS21955 4660c019d96cb60d7ddc89b4490710ff 562 Gene3D G3DSA:3.40.50.970 12 185 3.2E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS21955 4660c019d96cb60d7ddc89b4490710ff 562 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 427 446 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APT61_RS21955 4660c019d96cb60d7ddc89b4490710ff 562 PANTHER PTHR18968:SF128 1 562 0.0 T 22-04-2016 APT61_RS21955 4660c019d96cb60d7ddc89b4490710ff 562 SUPERFAMILY SSF52518 10 189 2.69E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS21955 4660c019d96cb60d7ddc89b4490710ff 562 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 538 4.0E-49 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APT61_RS21955 4660c019d96cb60d7ddc89b4490710ff 562 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 14 561 1.4E-200 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS21955 4660c019d96cb60d7ddc89b4490710ff 562 PANTHER PTHR18968 1 562 0.0 T 22-04-2016 APT61_RS21955 4660c019d96cb60d7ddc89b4490710ff 562 Gene3D G3DSA:3.40.50.970 363 560 2.8E-71 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS21955 4660c019d96cb60d7ddc89b4490710ff 562 SUPERFAMILY SSF52467 165 358 9.82E-57 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS21955 4660c019d96cb60d7ddc89b4490710ff 562 SUPERFAMILY SSF52518 366 560 1.32E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS21955 4660c019d96cb60d7ddc89b4490710ff 562 Gene3D G3DSA:3.40.50.1220 197 358 1.0E-62 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS10860 57b550918236cc65e8f44791adea813a 295 Gene3D G3DSA:3.40.190.10 131 235 3.2E-23 T 22-04-2016 APT61_RS10860 57b550918236cc65e8f44791adea813a 295 SUPERFAMILY SSF53850 48 277 1.3E-35 T 22-04-2016 APT61_RS10860 57b550918236cc65e8f44791adea813a 295 SMART SM00062 51 280 3.5E-17 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS10860 57b550918236cc65e8f44791adea813a 295 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 278 1.7E-30 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS10860 57b550918236cc65e8f44791adea813a 295 Gene3D G3DSA:3.40.190.10 49 130 2.4E-20 T 22-04-2016 APT61_RS10860 57b550918236cc65e8f44791adea813a 295 Gene3D G3DSA:3.40.190.10 240 278 2.4E-20 T 22-04-2016 APT61_RS13840 1fca1b6058d5b74ee4ea07feaefe122a 263 PANTHER PTHR30222:SF6 1 259 2.7E-163 T 22-04-2016 APT61_RS13840 1fca1b6058d5b74ee4ea07feaefe122a 263 SUPERFAMILY SSF161098 3 254 5.51E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS13840 1fca1b6058d5b74ee4ea07feaefe122a 263 Gene3D G3DSA:1.10.3720.10 5 257 2.5E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS13840 1fca1b6058d5b74ee4ea07feaefe122a 263 PANTHER PTHR30222 1 259 2.7E-163 T 22-04-2016 APT61_RS13840 1fca1b6058d5b74ee4ea07feaefe122a 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 248 1.3E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS05180 cd9da93c84051d5997d4536e3bc41d1f 443 SUPERFAMILY SSF103473 13 439 2.22E-84 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS05180 cd9da93c84051d5997d4536e3bc41d1f 443 Gene3D G3DSA:1.20.1250.20 14 211 7.9E-42 T 22-04-2016 APT61_RS05180 cd9da93c84051d5997d4536e3bc41d1f 443 Pfam PF07690 Major Facilitator Superfamily 26 405 9.3E-57 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS05180 cd9da93c84051d5997d4536e3bc41d1f 443 PIRSF PIRSF002808 3 442 9.7E-46 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APT61_RS05180 cd9da93c84051d5997d4536e3bc41d1f 443 Gene3D G3DSA:1.20.1250.20 255 441 5.6E-36 T 22-04-2016 APT61_RS05180 cd9da93c84051d5997d4536e3bc41d1f 443 PANTHER PTHR11662 18 439 1.8E-82 T 22-04-2016 APT61_RS09130 9d6eeb10b3445f2775b6976e7be33271 334 SUPERFAMILY SSF47413 6 64 2.11E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS09130 9d6eeb10b3445f2775b6976e7be33271 334 Gene3D G3DSA:3.40.50.2300 68 181 2.4E-29 T 22-04-2016 APT61_RS09130 9d6eeb10b3445f2775b6976e7be33271 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS09130 9d6eeb10b3445f2775b6976e7be33271 334 SUPERFAMILY SSF53822 65 332 1.55E-44 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS09130 9d6eeb10b3445f2775b6976e7be33271 334 Gene3D G3DSA:3.40.50.2300 182 309 4.7E-37 T 22-04-2016 APT61_RS09130 9d6eeb10b3445f2775b6976e7be33271 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.2E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS09130 9d6eeb10b3445f2775b6976e7be33271 334 Gene3D G3DSA:1.10.260.40 7 67 9.2E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS09130 9d6eeb10b3445f2775b6976e7be33271 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 5.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS09130 9d6eeb10b3445f2775b6976e7be33271 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 5.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS09130 9d6eeb10b3445f2775b6976e7be33271 334 PANTHER PTHR30146 5 332 1.8E-130 T 22-04-2016 APT61_RS09130 9d6eeb10b3445f2775b6976e7be33271 334 PANTHER PTHR30146:SF34 5 332 1.8E-130 T 22-04-2016 APT61_RS09130 9d6eeb10b3445f2775b6976e7be33271 334 Pfam PF13377 Periplasmic binding protein-like domain 174 330 4.3E-26 T 22-04-2016 APT61_RS09130 9d6eeb10b3445f2775b6976e7be33271 334 SMART SM00354 6 76 2.5E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 SUPERFAMILY SSF103088 224 347 4.05E-35 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS14770 cd4c1786869973d4863506904b527d13 359 ProSitePatterns PS01068 OmpA-like domain. 270 314 - T 22-04-2016 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 Gene3D G3DSA:3.30.1330.60 225 347 4.2E-40 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS14770 cd4c1786869973d4863506904b527d13 359 PRINTS PR01021 OMPA domain signature 268 283 2.7E-24 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 PRINTS PR01021 OMPA domain signature 236 258 2.7E-24 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 PRINTS PR01021 OMPA domain signature 283 299 2.7E-24 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 PRINTS PR01022 Outer membrane protein A signature 253 272 1.1E-68 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 PRINTS PR01022 Outer membrane protein A signature 292 311 1.1E-68 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 PRINTS PR01022 Outer membrane protein A signature 119 135 1.1E-68 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 PRINTS PR01022 Outer membrane protein A signature 326 339 1.1E-68 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 PRINTS PR01022 Outer membrane protein A signature 177 191 1.1E-68 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 PRINTS PR01022 Outer membrane protein A signature 191 205 1.1E-68 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 PRINTS PR01022 Outer membrane protein A signature 224 239 1.1E-68 T 22-04-2016 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 Pfam PF00691 OmpA family 235 330 8.6E-23 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS14770 cd4c1786869973d4863506904b527d13 359 PANTHER PTHR30128:SF16 9 359 2.0E-127 T 22-04-2016 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 Gene3D G3DSA:2.40.160.20 19 224 4.9E-76 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 Pfam PF01389 OmpA-like transmembrane domain 31 207 2.1E-70 T 22-04-2016 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 PANTHER PTHR30128 9 359 2.0E-127 T 22-04-2016 APT61_RS14770 cd4c1786869973d4863506904b527d13 359 SUPERFAMILY SSF56925 30 206 1.57E-41 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS06050 aa6146b7e8183999e8f3924e7dea70a8 73 Pfam PF07191 zinc-ribbons 4 68 7.4E-29 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 APT61_RS06050 aa6146b7e8183999e8f3924e7dea70a8 73 SUPERFAMILY SSF161187 1 69 1.22E-28 T 22-04-2016 IPR029037 YfgJ-like APT61_RS06050 aa6146b7e8183999e8f3924e7dea70a8 73 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 1 69 3.0E-23 T 22-04-2016 IPR010807 Protein of unknown function DUF1407 APT61_RS06050 aa6146b7e8183999e8f3924e7dea70a8 73 Gene3D G3DSA:2.10.290.10 1 69 4.1E-32 T 22-04-2016 IPR029037 YfgJ-like APT61_RS15740 2ad792be4ca8e98a60d751e7c7d37987 725 SMART SM00488 18 291 0.0051 T 22-04-2016 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 APT61_RS15740 2ad792be4ca8e98a60d751e7c7d37987 725 SMART SM00487 23 303 5.0E-5 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS15740 2ad792be4ca8e98a60d751e7c7d37987 725 PANTHER PTHR11472:SF32 1 722 0.0 T 22-04-2016 APT61_RS15740 2ad792be4ca8e98a60d751e7c7d37987 725 SMART SM00491 544 676 5.8E-32 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APT61_RS15740 2ad792be4ca8e98a60d751e7c7d37987 725 Pfam PF00270 DEAD/DEAH box helicase 31 94 2.2E-5 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APT61_RS15740 2ad792be4ca8e98a60d751e7c7d37987 725 PANTHER PTHR11472 1 722 0.0 T 22-04-2016 APT61_RS15740 2ad792be4ca8e98a60d751e7c7d37987 725 Pfam PF06733 DEAD_2 197 264 4.1E-7 T 22-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 APT61_RS15740 2ad792be4ca8e98a60d751e7c7d37987 725 SUPERFAMILY SSF52540 199 271 2.99E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15740 2ad792be4ca8e98a60d751e7c7d37987 725 SUPERFAMILY SSF52540 451 465 2.99E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15740 2ad792be4ca8e98a60d751e7c7d37987 725 SUPERFAMILY SSF52540 47 97 2.99E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15740 2ad792be4ca8e98a60d751e7c7d37987 725 SUPERFAMILY SSF52540 500 670 2.99E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15740 2ad792be4ca8e98a60d751e7c7d37987 725 Pfam PF13307 Helicase C-terminal domain 535 688 3.9E-24 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 APT61_RS15740 2ad792be4ca8e98a60d751e7c7d37987 725 Gene3D G3DSA:3.40.50.300 22 122 4.5E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15740 2ad792be4ca8e98a60d751e7c7d37987 725 Gene3D G3DSA:3.40.50.300 211 258 4.5E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19530 4bcdf6e50728b80585ec1e7ac399b523 247 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 193 234 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS19530 4bcdf6e50728b80585ec1e7ac399b523 247 PANTHER PTHR11019 14 246 5.6E-28 T 22-04-2016 APT61_RS19530 4bcdf6e50728b80585ec1e7ac399b523 247 Gene3D G3DSA:1.10.10.60 147 194 9.0E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19530 4bcdf6e50728b80585ec1e7ac399b523 247 SMART SM00342 156 238 2.8E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS19530 4bcdf6e50728b80585ec1e7ac399b523 247 Gene3D G3DSA:1.10.10.60 195 237 8.1E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19530 4bcdf6e50728b80585ec1e7ac399b523 247 SUPERFAMILY SSF46689 193 239 3.58E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19530 4bcdf6e50728b80585ec1e7ac399b523 247 Pfam PF12833 Helix-turn-helix domain 162 238 4.2E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS19530 4bcdf6e50728b80585ec1e7ac399b523 247 Gene3D G3DSA:2.60.120.280 22 118 4.8E-12 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS19530 4bcdf6e50728b80585ec1e7ac399b523 247 Pfam PF02311 AraC-like ligand binding domain 21 92 1.1E-14 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS19530 4bcdf6e50728b80585ec1e7ac399b523 247 PANTHER PTHR11019:SF75 14 246 5.6E-28 T 22-04-2016 APT61_RS19530 4bcdf6e50728b80585ec1e7ac399b523 247 SUPERFAMILY SSF51215 21 94 5.49E-15 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS05755 7aeb044389ee226e03fa92f4dae143f7 245 SUPERFAMILY SSF53335 12 189 1.36E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS05755 7aeb044389ee226e03fa92f4dae143f7 245 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 11 245 53.713 T 22-04-2016 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 APT61_RS05755 7aeb044389ee226e03fa92f4dae143f7 245 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APT61_RS05755 7aeb044389ee226e03fa92f4dae143f7 245 Gene3D G3DSA:3.40.50.150 32 238 4.3E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS05755 7aeb044389ee226e03fa92f4dae143f7 245 PANTHER PTHR18895:SF73 34 235 1.5E-77 T 22-04-2016 APT61_RS05755 7aeb044389ee226e03fa92f4dae143f7 245 PANTHER PTHR18895 34 235 1.5E-77 T 22-04-2016 APT61_RS05755 7aeb044389ee226e03fa92f4dae143f7 245 Pfam PF05175 Methyltransferase small domain 46 127 5.1E-12 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APT61_RS18185 88e8321a066f2e49207872624aaa0478 1160 Gene3D G3DSA:2.40.50.140 982 1078 2.7E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS18185 88e8321a066f2e49207872624aaa0478 1160 Pfam PF01336 OB-fold nucleic acid binding domain 1000 1072 2.1E-8 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 APT61_RS18185 88e8321a066f2e49207872624aaa0478 1160 Gene3D G3DSA:1.10.150.280 836 883 3.4E-6 T 22-04-2016 APT61_RS18185 88e8321a066f2e49207872624aaa0478 1160 SUPERFAMILY SSF89550 6 263 1.96E-16 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APT61_RS18185 88e8321a066f2e49207872624aaa0478 1160 Pfam PF02811 PHP domain 8 172 2.4E-39 T 22-04-2016 IPR004013 PHP domain GO:0003824 APT61_RS18185 88e8321a066f2e49207872624aaa0478 1160 PANTHER PTHR32294 2 1160 0.0 T 22-04-2016 APT61_RS18185 88e8321a066f2e49207872624aaa0478 1160 PANTHER PTHR32294:SF0 2 1160 0.0 T 22-04-2016 APT61_RS18185 88e8321a066f2e49207872624aaa0478 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 9.6E-26 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS18185 88e8321a066f2e49207872624aaa0478 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 295 735 8.6E-178 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS18185 88e8321a066f2e49207872624aaa0478 1160 SMART SM00481 7 74 1.1E-25 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APT61_RS18185 88e8321a066f2e49207872624aaa0478 1160 Gene3D G3DSA:3.20.20.140 6 256 9.4E-21 T 22-04-2016 APT61_RS18185 88e8321a066f2e49207872624aaa0478 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS16770 371e53cd93a7e6608cee2fe57d21de93 340 PANTHER PTHR30465:SF77 8 174 1.7E-190 T 22-04-2016 APT61_RS16770 371e53cd93a7e6608cee2fe57d21de93 340 PANTHER PTHR30465:SF77 198 340 1.7E-190 T 22-04-2016 APT61_RS16770 371e53cd93a7e6608cee2fe57d21de93 340 PANTHER PTHR30465 8 174 1.7E-190 T 22-04-2016 APT61_RS16770 371e53cd93a7e6608cee2fe57d21de93 340 PANTHER PTHR30465 198 340 1.7E-190 T 22-04-2016 APT61_RS16770 371e53cd93a7e6608cee2fe57d21de93 340 SUPERFAMILY SSF161098 96 165 3.01E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS16770 371e53cd93a7e6608cee2fe57d21de93 340 SUPERFAMILY SSF161098 204 325 3.01E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS16770 371e53cd93a7e6608cee2fe57d21de93 340 Gene3D G3DSA:1.10.3720.10 93 168 3.1E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS16770 371e53cd93a7e6608cee2fe57d21de93 340 Gene3D G3DSA:1.10.3720.10 207 335 3.1E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS16770 371e53cd93a7e6608cee2fe57d21de93 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 340 5.7E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS17400 21d27d14aff20931141bebbb49f9a82f 299 Pfam PF00348 Polyprenyl synthetase 32 268 6.5E-58 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APT61_RS17400 21d27d14aff20931141bebbb49f9a82f 299 SUPERFAMILY SSF48576 1 278 1.21E-87 T 22-04-2016 IPR008949 Isoprenoid synthase domain APT61_RS17400 21d27d14aff20931141bebbb49f9a82f 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APT61_RS17400 21d27d14aff20931141bebbb49f9a82f 299 PANTHER PTHR12001:SF23 1 294 1.5E-109 T 22-04-2016 APT61_RS17400 21d27d14aff20931141bebbb49f9a82f 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APT61_RS17400 21d27d14aff20931141bebbb49f9a82f 299 Gene3D G3DSA:1.10.600.10 2 297 2.4E-91 T 22-04-2016 IPR008949 Isoprenoid synthase domain APT61_RS17400 21d27d14aff20931141bebbb49f9a82f 299 PANTHER PTHR12001 1 294 1.5E-109 T 22-04-2016 IPR017446 Polyprenyl synthetase-related APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 SUPERFAMILY SSF50447 205 301 3.14E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.4E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 PANTHER PTHR23115:SF151 1 392 0.0 T 22-04-2016 APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 SUPERFAMILY SSF52540 6 219 3.02E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 8.1E-34 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 PANTHER PTHR23115 1 392 0.0 T 22-04-2016 APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 Gene3D G3DSA:2.40.30.10 209 298 4.3E-37 T 22-04-2016 APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 8.1E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.2E-58 T 22-04-2016 APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 SUPERFAMILY SSF50465 298 393 2.62E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.013 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 Gene3D G3DSA:3.40.50.300 3 208 5.0E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 Gene3D G3DSA:2.40.30.10 300 393 8.4E-47 T 22-04-2016 APT61_RS02035 3342e0aa0f596d800bfb2fba479d0777 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.2E-238 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APT61_RS13925 5d455f34454d86d9ac952bc426818b42 216 Pfam PF13036 Peptidoglycan-synthase activator LpoB 11 213 1.9E-54 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB APT61_RS13925 5d455f34454d86d9ac952bc426818b42 216 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 5 214 34.086 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB APT61_RS13925 5d455f34454d86d9ac952bc426818b42 216 PANTHER PTHR40593 3 216 2.7E-86 T 22-04-2016 APT61_RS13925 5d455f34454d86d9ac952bc426818b42 216 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 7 215 9.7E-58 T 22-04-2016 IPR014094 Penicillin-binding protein activator LpoB APT61_RS21940 5868936e2e6bd990f76d97f000057ce9 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 3 299 2.5E-112 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 APT61_RS21940 5868936e2e6bd990f76d97f000057ce9 306 Pfam PF00294 pfkB family carbohydrate kinase 2 294 2.1E-63 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APT61_RS21940 5868936e2e6bd990f76d97f000057ce9 306 PANTHER PTHR10584:SF184 1 302 4.6E-114 T 22-04-2016 APT61_RS21940 5868936e2e6bd990f76d97f000057ce9 306 Gene3D G3DSA:3.40.1190.20 1 302 1.9E-89 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS21940 5868936e2e6bd990f76d97f000057ce9 306 SUPERFAMILY SSF53613 1 302 8.26E-81 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS21940 5868936e2e6bd990f76d97f000057ce9 306 PANTHER PTHR10584 1 302 4.6E-114 T 22-04-2016 APT61_RS21940 5868936e2e6bd990f76d97f000057ce9 306 PRINTS PR00990 Ribokinase signature 104 117 4.470682E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APT61_RS21940 5868936e2e6bd990f76d97f000057ce9 306 PRINTS PR00990 Ribokinase signature 173 188 4.470682E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APT61_RS21940 5868936e2e6bd990f76d97f000057ce9 306 PRINTS PR00990 Ribokinase signature 217 228 4.470682E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APT61_RS21940 5868936e2e6bd990f76d97f000057ce9 306 PRINTS PR00990 Ribokinase signature 5 26 4.470682E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APT61_RS21940 5868936e2e6bd990f76d97f000057ce9 306 PRINTS PR00990 Ribokinase signature 32 51 4.470682E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APT61_RS09900 56149ba0b57ccb602f00682e80ff3c07 147 Gene3D G3DSA:3.10.450.40 32 114 2.6E-9 T 22-04-2016 APT61_RS09900 56149ba0b57ccb602f00682e80ff3c07 147 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 4 113 5.3E-23 T 22-04-2016 IPR017737 Type VI secretion system, lysozyme-related protein APT61_RS09900 56149ba0b57ccb602f00682e80ff3c07 147 Pfam PF04965 Gene 25-like lysozyme 32 113 3.4E-11 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD APT61_RS09900 56149ba0b57ccb602f00682e80ff3c07 147 SUPERFAMILY SSF160719 30 118 6.15E-17 T 22-04-2016 APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 Pfam PF05228 CHASE4 domain 68 228 1.9E-19 T 22-04-2016 IPR007892 CHASE4 APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 Gene3D G3DSA:3.30.70.270 443 611 6.3E-55 T 22-04-2016 APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 Pfam PF00990 Diguanylate cyclase, GGDEF domain 443 599 2.3E-46 T 22-04-2016 IPR000160 GGDEF domain APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 Gene3D G3DSA:3.20.20.450 616 859 3.0E-85 T 22-04-2016 IPR001633 EAL domain APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 439 601 1.5E-38 T 22-04-2016 IPR000160 GGDEF domain APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 SMART SM00267 431 603 1.0E-61 T 22-04-2016 IPR000160 GGDEF domain APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 SUPERFAMILY SSF141868 618 859 4.18E-80 T 22-04-2016 IPR001633 EAL domain APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 PANTHER PTHR10799 318 693 2.3E-80 T 22-04-2016 APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 PANTHER PTHR10799 855 874 2.3E-80 T 22-04-2016 APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 SUPERFAMILY SSF55073 447 603 1.88E-47 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 SUPERFAMILY SSF55785 309 429 2.26E-18 T 22-04-2016 IPR000014 PAS domain APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 PANTHER PTHR10799:SF774 318 693 2.3E-80 T 22-04-2016 APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 PANTHER PTHR10799:SF774 855 874 2.3E-80 T 22-04-2016 APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 Pfam PF00563 EAL domain 619 850 2.5E-67 T 22-04-2016 IPR001633 EAL domain APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 Gene3D G3DSA:3.30.450.20 316 429 2.5E-17 T 22-04-2016 APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 SMART SM00091 319 385 4.1E-5 T 22-04-2016 IPR000014 PAS domain APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 316 437 7.9E-11 T 22-04-2016 IPR000014 PAS domain APT61_RS17910 4071242889064442fa98906a62f7a1e1 877 SMART SM00052 613 855 4.1E-95 T 22-04-2016 IPR001633 EAL domain APT61_RS04905 fa8beb630cf89a28cc114b54936fe191 142 PANTHER PTHR30353 5 141 4.6E-59 T 22-04-2016 IPR032818 DedA family APT61_RS04905 fa8beb630cf89a28cc114b54936fe191 142 Pfam PF09335 SNARE associated Golgi protein 26 133 5.9E-9 T 22-04-2016 IPR032816 SNARE associated Golgi protein APT61_RS04905 fa8beb630cf89a28cc114b54936fe191 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 22 110 0.005 T 22-04-2016 IPR020143 Uncharacterised protein family, RP436 APT61_RS04905 fa8beb630cf89a28cc114b54936fe191 142 PANTHER PTHR30353:SF12 5 141 4.6E-59 T 22-04-2016 APT61_RS13615 dd8bf10934675d372424440dea3d7069 132 Pfam PF06141 Phage minor tail protein U 1 130 7.4E-45 T 22-04-2016 IPR009312 Minor tail protein U-like APT61_RS13615 dd8bf10934675d372424440dea3d7069 132 SUPERFAMILY SSF143749 2 130 8.63E-47 T 22-04-2016 IPR009312 Minor tail protein U-like APT61_RS04385 bcc4de69472ec7cf4f985f749bc1d98a 338 PANTHER PTHR30146:SF57 1 333 6.6E-261 T 22-04-2016 APT61_RS04385 bcc4de69472ec7cf4f985f749bc1d98a 338 PANTHER PTHR30146 1 333 6.6E-261 T 22-04-2016 APT61_RS04385 bcc4de69472ec7cf4f985f749bc1d98a 338 Gene3D G3DSA:1.10.260.40 2 57 1.3E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS04385 bcc4de69472ec7cf4f985f749bc1d98a 338 Pfam PF13377 Periplasmic binding protein-like domain 168 329 3.3E-38 T 22-04-2016 APT61_RS04385 bcc4de69472ec7cf4f985f749bc1d98a 338 SMART SM00354 1 71 3.2E-38 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS04385 bcc4de69472ec7cf4f985f749bc1d98a 338 SUPERFAMILY SSF47413 1 59 3.88E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS04385 bcc4de69472ec7cf4f985f749bc1d98a 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS04385 bcc4de69472ec7cf4f985f749bc1d98a 338 SUPERFAMILY SSF53822 61 332 3.53E-87 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS04385 bcc4de69472ec7cf4f985f749bc1d98a 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.6E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS04385 bcc4de69472ec7cf4f985f749bc1d98a 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.6E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS04385 bcc4de69472ec7cf4f985f749bc1d98a 338 Gene3D G3DSA:3.40.50.2300 58 166 7.7E-46 T 22-04-2016 APT61_RS04385 bcc4de69472ec7cf4f985f749bc1d98a 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.6E-22 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS04385 bcc4de69472ec7cf4f985f749bc1d98a 338 Gene3D G3DSA:3.40.50.2300 167 330 2.0E-53 T 22-04-2016 APT61_RS05365 e03b7fc4bbecd16da2dbeaffddd0fc7e 61 PANTHER PTHR36569 1 61 1.8E-29 T 22-04-2016 APT61_RS05365 e03b7fc4bbecd16da2dbeaffddd0fc7e 61 PANTHER PTHR36569:SF1 1 61 1.8E-29 T 22-04-2016 APT61_RS05365 e03b7fc4bbecd16da2dbeaffddd0fc7e 61 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 4.6E-8 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat APT61_RS05365 e03b7fc4bbecd16da2dbeaffddd0fc7e 61 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 2.5E-10 T 22-04-2016 IPR019626 Stress-induced protein, KGG, repeat APT61_RS11690 4aa0c31b10fa2b4409d5c67283ce1061 228 SUPERFAMILY SSF48008 83 212 1.54E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS11690 4aa0c31b10fa2b4409d5c67283ce1061 228 PANTHER PTHR11751:SF362 12 101 1.5E-48 T 22-04-2016 APT61_RS11690 4aa0c31b10fa2b4409d5c67283ce1061 228 PANTHER PTHR11751 12 101 1.5E-48 T 22-04-2016 APT61_RS11690 4aa0c31b10fa2b4409d5c67283ce1061 228 SMART SM00895 85 209 4.7E-16 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS11690 4aa0c31b10fa2b4409d5c67283ce1061 228 Pfam PF07729 FCD domain 89 208 5.3E-25 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS11690 4aa0c31b10fa2b4409d5c67283ce1061 228 SUPERFAMILY SSF46785 8 100 8.8E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11690 4aa0c31b10fa2b4409d5c67283ce1061 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 2.2E-16 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS11690 4aa0c31b10fa2b4409d5c67283ce1061 228 SMART SM00345 17 75 3.2E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS11690 4aa0c31b10fa2b4409d5c67283ce1061 228 Gene3D G3DSA:1.20.120.530 79 220 2.6E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS11690 4aa0c31b10fa2b4409d5c67283ce1061 228 Gene3D G3DSA:1.10.10.10 4 76 9.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19025 e370dc424ff0d9fcec0e478e9f99dfa1 429 PANTHER PTHR23508 5 419 5.2E-249 T 22-04-2016 APT61_RS19025 e370dc424ff0d9fcec0e478e9f99dfa1 429 Gene3D G3DSA:1.20.1250.20 238 421 4.9E-16 T 22-04-2016 APT61_RS19025 e370dc424ff0d9fcec0e478e9f99dfa1 429 Gene3D G3DSA:1.20.1250.20 15 217 8.1E-20 T 22-04-2016 APT61_RS19025 e370dc424ff0d9fcec0e478e9f99dfa1 429 Pfam PF07690 Major Facilitator Superfamily 58 383 7.8E-24 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS19025 e370dc424ff0d9fcec0e478e9f99dfa1 429 PANTHER PTHR23508:SF5 5 419 5.2E-249 T 22-04-2016 APT61_RS19025 e370dc424ff0d9fcec0e478e9f99dfa1 429 SUPERFAMILY SSF103473 11 420 1.31E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS13485 de80f972875dec9fb25e4b65bd137651 82 PANTHER PTHR33884:SF2 1 81 1.1E-34 T 22-04-2016 APT61_RS13485 de80f972875dec9fb25e4b65bd137651 82 PANTHER PTHR33884 1 81 1.1E-34 T 22-04-2016 APT61_RS13485 de80f972875dec9fb25e4b65bd137651 82 Pfam PF04226 Transglycosylase associated protein 33 81 1.2E-15 T 22-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 APT61_RS15280 e37e0b83ec52809bfb67b862a9edc41e 222 PANTHER PTHR30614:SF10 1 221 4.6E-155 T 22-04-2016 APT61_RS15280 e37e0b83ec52809bfb67b862a9edc41e 222 SUPERFAMILY SSF161098 6 201 3.01E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15280 e37e0b83ec52809bfb67b862a9edc41e 222 Gene3D G3DSA:1.10.3720.10 3 214 9.9E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15280 e37e0b83ec52809bfb67b862a9edc41e 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 1.4E-17 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APT61_RS15280 e37e0b83ec52809bfb67b862a9edc41e 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 1.7E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15280 e37e0b83ec52809bfb67b862a9edc41e 222 PANTHER PTHR30614 1 221 4.6E-155 T 22-04-2016 APT61_RS21450 80f35400c993e68b28cbbb4eb0a236e6 272 PANTHER PTHR11019:SF130 25 269 7.7E-107 T 22-04-2016 APT61_RS21450 80f35400c993e68b28cbbb4eb0a236e6 272 SUPERFAMILY SSF46689 215 265 7.17E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS21450 80f35400c993e68b28cbbb4eb0a236e6 272 SMART SM00342 178 261 2.3E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS21450 80f35400c993e68b28cbbb4eb0a236e6 272 Pfam PF12833 Helix-turn-helix domain 184 263 4.5E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS21450 80f35400c993e68b28cbbb4eb0a236e6 272 Pfam PF02311 AraC-like ligand binding domain 26 124 8.9E-9 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS21450 80f35400c993e68b28cbbb4eb0a236e6 272 SUPERFAMILY SSF51215 7 141 1.31E-14 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS21450 80f35400c993e68b28cbbb4eb0a236e6 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 261 4.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS21450 80f35400c993e68b28cbbb4eb0a236e6 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 230 245 4.9E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS21450 80f35400c993e68b28cbbb4eb0a236e6 272 Gene3D G3DSA:1.10.10.60 166 214 1.2E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS21450 80f35400c993e68b28cbbb4eb0a236e6 272 Gene3D G3DSA:2.60.120.280 24 146 9.5E-14 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS21450 80f35400c993e68b28cbbb4eb0a236e6 272 Gene3D G3DSA:1.10.10.60 215 264 3.4E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS21450 80f35400c993e68b28cbbb4eb0a236e6 272 PANTHER PTHR11019 25 269 7.7E-107 T 22-04-2016 APT61_RS21450 80f35400c993e68b28cbbb4eb0a236e6 272 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 215 257 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS07830 bc186f0a43545f3bf2fbcb2eb7f49108 258 PANTHER PTHR21235 1 258 5.3E-116 T 22-04-2016 APT61_RS07830 bc186f0a43545f3bf2fbcb2eb7f49108 258 SUPERFAMILY SSF51366 1 257 6.99E-73 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APT61_RS07830 bc186f0a43545f3bf2fbcb2eb7f49108 258 Gene3D G3DSA:3.20.20.70 4 257 1.7E-86 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS07830 bc186f0a43545f3bf2fbcb2eb7f49108 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.7E-116 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 APT61_RS07830 bc186f0a43545f3bf2fbcb2eb7f49108 258 PANTHER PTHR21235:SF2 1 258 5.3E-116 T 22-04-2016 APT61_RS07830 bc186f0a43545f3bf2fbcb2eb7f49108 258 Pfam PF00977 Histidine biosynthesis protein 5 239 2.3E-77 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 APT61_RS07830 bc186f0a43545f3bf2fbcb2eb7f49108 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.723 T 22-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 APT61_RS02640 5504c2030898915658c7108d9c5a45cd 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APT61_RS02640 5504c2030898915658c7108d9c5a45cd 477 PRINTS PR00045 Sigma-54 factor signature 450 468 1.1E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APT61_RS02640 5504c2030898915658c7108d9c5a45cd 477 PRINTS PR00045 Sigma-54 factor signature 392 403 1.1E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APT61_RS02640 5504c2030898915658c7108d9c5a45cd 477 PRINTS PR00045 Sigma-54 factor signature 376 388 1.1E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APT61_RS02640 5504c2030898915658c7108d9c5a45cd 477 PRINTS PR00045 Sigma-54 factor signature 186 203 1.1E-31 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APT61_RS02640 5504c2030898915658c7108d9c5a45cd 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APT61_RS02640 5504c2030898915658c7108d9c5a45cd 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 2.2E-61 T 22-04-2016 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 APT61_RS02640 5504c2030898915658c7108d9c5a45cd 477 PANTHER PTHR32248:SF4 1 477 5.8E-188 T 22-04-2016 APT61_RS02640 5504c2030898915658c7108d9c5a45cd 477 PIRSF PIRSF000774 1 477 2.3E-152 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APT61_RS02640 5504c2030898915658c7108d9c5a45cd 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 6.1E-16 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APT61_RS02640 5504c2030898915658c7108d9c5a45cd 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 1.1E-70 T 22-04-2016 IPR007634 RNA polymerase sigma factor 54, DNA-binding APT61_RS02640 5504c2030898915658c7108d9c5a45cd 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 474 4.1E-162 T 22-04-2016 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 APT61_RS02640 5504c2030898915658c7108d9c5a45cd 477 PANTHER PTHR32248 1 477 5.8E-188 T 22-04-2016 APT61_RS19565 2b6244310c9f2287d025094444872258 203 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19565 2b6244310c9f2287d025094444872258 203 SUPERFAMILY SSF46894 135 198 2.11E-12 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS19565 2b6244310c9f2287d025094444872258 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 3.6E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19565 2b6244310c9f2287d025094444872258 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 3.6E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19565 2b6244310c9f2287d025094444872258 203 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 3.6E-8 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19565 2b6244310c9f2287d025094444872258 203 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 196 5.1E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19565 2b6244310c9f2287d025094444872258 203 SMART SM00421 142 199 1.5E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19565 2b6244310c9f2287d025094444872258 203 Gene3D G3DSA:1.10.10.10 140 199 2.4E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00970 6771810d13dd923472c149eb4173ad37 274 Pfam PF01678 Diaminopimelate epimerase 152 265 3.0E-33 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS00970 6771810d13dd923472c149eb4173ad37 274 Pfam PF01678 Diaminopimelate epimerase 3 123 1.5E-34 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS00970 6771810d13dd923472c149eb4173ad37 274 Gene3D G3DSA:3.10.310.10 1 120 5.5E-50 T 22-04-2016 APT61_RS00970 6771810d13dd923472c149eb4173ad37 274 SUPERFAMILY SSF54506 2 273 2.03E-56 T 22-04-2016 APT61_RS00970 6771810d13dd923472c149eb4173ad37 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.768 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS00970 6771810d13dd923472c149eb4173ad37 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 2.6E-102 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS00970 6771810d13dd923472c149eb4173ad37 274 Gene3D G3DSA:3.10.310.10 121 262 9.6E-53 T 22-04-2016 APT61_RS00970 6771810d13dd923472c149eb4173ad37 274 PANTHER PTHR31689 1 272 2.1E-142 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS00970 6771810d13dd923472c149eb4173ad37 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS18540 ffd1b2c74e7552102793458ef8874161 398 Pfam PF00482 Type II secretion system (T2SS), protein F 63 185 3.6E-27 T 22-04-2016 IPR018076 Type II secretion system F domain APT61_RS18540 ffd1b2c74e7552102793458ef8874161 398 Pfam PF00482 Type II secretion system (T2SS), protein F 268 387 2.5E-23 T 22-04-2016 IPR018076 Type II secretion system F domain APT61_RS18540 ffd1b2c74e7552102793458ef8874161 398 PANTHER PTHR30012:SF0 5 396 5.7E-143 T 22-04-2016 APT61_RS18540 ffd1b2c74e7552102793458ef8874161 398 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 157 185 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 APT61_RS18540 ffd1b2c74e7552102793458ef8874161 398 PANTHER PTHR30012 5 396 5.7E-143 T 22-04-2016 APT61_RS18540 ffd1b2c74e7552102793458ef8874161 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 58 70 5.7E-14 T 22-04-2016 IPR003004 GspF/PilC family APT61_RS18540 ffd1b2c74e7552102793458ef8874161 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 360 374 5.7E-14 T 22-04-2016 IPR003004 GspF/PilC family APT61_RS18540 ffd1b2c74e7552102793458ef8874161 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 376 395 5.7E-14 T 22-04-2016 IPR003004 GspF/PilC family APT61_RS18540 ffd1b2c74e7552102793458ef8874161 398 PRINTS PR00812 Bacterial general secretion pathway protein F signature 157 185 5.7E-14 T 22-04-2016 IPR003004 GspF/PilC family APT61_RS03970 527a6cc8aebec3df10671109e87318d1 188 Pfam PF02325 YGGT family 104 167 5.2E-15 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 APT61_RS03970 527a6cc8aebec3df10671109e87318d1 188 Pfam PF02325 YGGT family 10 78 1.2E-21 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 APT61_RS03970 527a6cc8aebec3df10671109e87318d1 188 PANTHER PTHR33219 3 186 1.2E-90 T 22-04-2016 APT61_RS03970 527a6cc8aebec3df10671109e87318d1 188 PANTHER PTHR33219:SF5 3 186 1.2E-90 T 22-04-2016 APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 Gene3D G3DSA:1.50.10.20 1177 1434 7.4E-39 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 PIRSF PIRSF038980 1 1653 0.0 T 22-04-2016 IPR026284 Alpha-2-macroglobulin domain protein, bacteria APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 PANTHER PTHR11412:SF104 253 652 0.0 T 22-04-2016 APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 PANTHER PTHR11412:SF104 668 962 0.0 T 22-04-2016 APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 PANTHER PTHR11412:SF104 1635 1640 0.0 T 22-04-2016 APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 Pfam PF07678 A-macroglobulin complement component 1227 1321 5.8E-5 T 22-04-2016 IPR011626 Alpha-macroglobulin complement component GO:0005615 APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 PANTHER PTHR11412 253 652 0.0 T 22-04-2016 APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 PANTHER PTHR11412 668 962 0.0 T 22-04-2016 APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 PANTHER PTHR11412 1635 1640 0.0 T 22-04-2016 APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 Pfam PF01835 MG2 domain 389 478 7.2E-20 T 22-04-2016 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 Pfam PF00207 Alpha-2-macroglobulin family 976 1057 2.5E-7 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 SMART SM01359 759 907 1.0E-31 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 290 382 1.2E-17 T 22-04-2016 IPR021868 Alpha-2-macroglobulin MG1 domain APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 SUPERFAMILY SSF48239 1178 1434 2.47E-43 T 22-04-2016 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 SMART SM01360 967 1058 2.4E-19 T 22-04-2016 IPR001599 Alpha-2-macroglobulin GO:0004866 APT61_RS05990 afa21dc673644f58402447b2dd2bcae9 1653 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 760 907 6.9E-11 T 22-04-2016 IPR011625 Alpha-2-macroglobulin, N-terminal 2 APT61_RS02745 f4027ea153eaca86e13551ecbbbf5ebc 220 Gene3D G3DSA:3.40.50.2300 1 122 1.3E-32 T 22-04-2016 APT61_RS02745 f4027ea153eaca86e13551ecbbbf5ebc 220 SMART SM00448 1 112 2.1E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS02745 f4027ea153eaca86e13551ecbbbf5ebc 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 2.4E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS02745 f4027ea153eaca86e13551ecbbbf5ebc 220 SMART SM00862 145 216 2.0E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS02745 f4027ea153eaca86e13551ecbbbf5ebc 220 SUPERFAMILY SSF46894 118 217 4.25E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS02745 f4027ea153eaca86e13551ecbbbf5ebc 220 PANTHER PTHR26402 1 217 4.7E-128 T 22-04-2016 APT61_RS02745 f4027ea153eaca86e13551ecbbbf5ebc 220 Pfam PF00072 Response regulator receiver domain 4 112 1.9E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS02745 f4027ea153eaca86e13551ecbbbf5ebc 220 PANTHER PTHR26402:SF595 1 217 4.7E-128 T 22-04-2016 APT61_RS02745 f4027ea153eaca86e13551ecbbbf5ebc 220 SUPERFAMILY SSF52172 1 118 2.7E-35 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS02745 f4027ea153eaca86e13551ecbbbf5ebc 220 Gene3D G3DSA:1.10.10.10 123 218 2.9E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS02920 6091353f5147bfdedf64cea1e6a37b33 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 2.1E-112 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS02920 6091353f5147bfdedf64cea1e6a37b33 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.037 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS02920 6091353f5147bfdedf64cea1e6a37b33 287 PANTHER PTHR21091:SF18 8 234 7.8E-94 T 22-04-2016 APT61_RS02920 6091353f5147bfdedf64cea1e6a37b33 287 PANTHER PTHR21091 8 234 7.8E-94 T 22-04-2016 APT61_RS02920 6091353f5147bfdedf64cea1e6a37b33 287 SUPERFAMILY SSF53790 12 232 1.31E-83 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APT61_RS02920 6091353f5147bfdedf64cea1e6a37b33 287 Gene3D G3DSA:3.30.950.10 121 236 3.3E-42 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APT61_RS02920 6091353f5147bfdedf64cea1e6a37b33 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 22-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS02920 6091353f5147bfdedf64cea1e6a37b33 287 Gene3D G3DSA:3.40.1010.10 12 120 1.1E-16 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APT61_RS02920 6091353f5147bfdedf64cea1e6a37b33 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 212 1.1E-29 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APT61_RS02920 6091353f5147bfdedf64cea1e6a37b33 287 PIRSF PIRSF005917 1 287 1.2E-106 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS20365 c327286d65e5b4761ad26d29a4c0c868 508 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 18 219 5.2E-60 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APT61_RS20365 c327286d65e5b4761ad26d29a4c0c868 508 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 499 23.711 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APT61_RS20365 c327286d65e5b4761ad26d29a4c0c868 508 PIRSF PIRSF017184 15 504 6.2E-163 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 APT61_RS20365 c327286d65e5b4761ad26d29a4c0c868 508 Pfam PF03853 YjeF-related protein N-terminus 40 199 2.3E-44 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APT61_RS20365 c327286d65e5b4761ad26d29a4c0c868 508 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 438 448 - T 22-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site APT61_RS20365 c327286d65e5b4761ad26d29a4c0c868 508 Pfam PF01256 Carbohydrate kinase 258 495 8.3E-77 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APT61_RS20365 c327286d65e5b4761ad26d29a4c0c868 508 PANTHER PTHR12592:SF0 6 507 1.0E-153 T 22-04-2016 APT61_RS20365 c327286d65e5b4761ad26d29a4c0c868 508 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 234 499 1.1E-92 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 APT61_RS20365 c327286d65e5b4761ad26d29a4c0c868 508 SUPERFAMILY SSF53613 234 499 2.57E-75 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS20365 c327286d65e5b4761ad26d29a4c0c868 508 SUPERFAMILY SSF64153 16 256 3.79E-63 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APT61_RS20365 c327286d65e5b4761ad26d29a4c0c868 508 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 23.26 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APT61_RS20365 c327286d65e5b4761ad26d29a4c0c868 508 Gene3D G3DSA:3.40.50.10260 16 240 2.1E-69 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 APT61_RS20365 c327286d65e5b4761ad26d29a4c0c868 508 Gene3D G3DSA:3.40.1190.20 241 499 1.6E-92 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS20365 c327286d65e5b4761ad26d29a4c0c868 508 PANTHER PTHR12592 6 507 1.0E-153 T 22-04-2016 APT61_RS01595 5a65a80e1dfbb3adbbcb3ab2c75adaa1 231 PANTHER PTHR13903 1 231 5.8E-127 T 22-04-2016 IPR012093 Pirin APT61_RS01595 5a65a80e1dfbb3adbbcb3ab2c75adaa1 231 SUPERFAMILY SSF51182 1 231 1.76E-80 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS01595 5a65a80e1dfbb3adbbcb3ab2c75adaa1 231 PIRSF PIRSF006232 1 230 2.5E-57 T 22-04-2016 IPR012093 Pirin APT61_RS01595 5a65a80e1dfbb3adbbcb3ab2c75adaa1 231 Gene3D G3DSA:2.60.120.10 5 230 3.5E-73 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS01595 5a65a80e1dfbb3adbbcb3ab2c75adaa1 231 Pfam PF02678 Pirin 10 119 1.4E-37 T 22-04-2016 IPR003829 Pirin, N-terminal domain APT61_RS01595 5a65a80e1dfbb3adbbcb3ab2c75adaa1 231 PANTHER PTHR13903:SF7 1 231 5.8E-127 T 22-04-2016 APT61_RS17380 35fee39ab6a8d4bc716c9382a3a2ba6e 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 9.0E-36 T 22-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APT61_RS17380 35fee39ab6a8d4bc716c9382a3a2ba6e 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 142 1.7E-23 T 22-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APT61_RS17380 35fee39ab6a8d4bc716c9382a3a2ba6e 303 SUPERFAMILY SSF48179 168 289 8.5E-38 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS17380 35fee39ab6a8d4bc716c9382a3a2ba6e 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 4.8E-75 T 22-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 APT61_RS17380 35fee39ab6a8d4bc716c9382a3a2ba6e 303 PANTHER PTHR21708:SF24 1 294 3.2E-87 T 22-04-2016 APT61_RS17380 35fee39ab6a8d4bc716c9382a3a2ba6e 303 Gene3D G3DSA:1.10.1040.10 175 290 2.3E-43 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS17380 35fee39ab6a8d4bc716c9382a3a2ba6e 303 PANTHER PTHR21708 1 294 3.2E-87 T 22-04-2016 APT61_RS17380 35fee39ab6a8d4bc716c9382a3a2ba6e 303 SUPERFAMILY SSF51735 1 167 3.18E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS17380 35fee39ab6a8d4bc716c9382a3a2ba6e 303 Gene3D G3DSA:3.40.50.720 1 174 1.1E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS12040 07b94479204f3f600f83aafd27a47bdc 494 PANTHER PTHR34217:SF1 1 494 2.8E-246 T 22-04-2016 APT61_RS12040 07b94479204f3f600f83aafd27a47bdc 494 PIRSF PIRSF006615 1 494 1.4E-195 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APT61_RS12040 07b94479204f3f600f83aafd27a47bdc 494 SUPERFAMILY SSF55486 3 494 1.16E-123 T 22-04-2016 APT61_RS12040 07b94479204f3f600f83aafd27a47bdc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 445 463 1.2E-43 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APT61_RS12040 07b94479204f3f600f83aafd27a47bdc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 1.2E-43 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APT61_RS12040 07b94479204f3f600f83aafd27a47bdc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 147 167 1.2E-43 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APT61_RS12040 07b94479204f3f600f83aafd27a47bdc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 1.2E-43 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APT61_RS12040 07b94479204f3f600f83aafd27a47bdc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 290 306 1.2E-43 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APT61_RS12040 07b94479204f3f600f83aafd27a47bdc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 263 282 1.2E-43 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APT61_RS12040 07b94479204f3f600f83aafd27a47bdc 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 243 262 1.2E-43 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APT61_RS12040 07b94479204f3f600f83aafd27a47bdc 494 PANTHER PTHR34217 1 494 2.8E-246 T 22-04-2016 APT61_RS12040 07b94479204f3f600f83aafd27a47bdc 494 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 13 493 7.0E-100 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 PANTHER PTHR32089 1 519 1.8E-192 T 22-04-2016 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 SMART SM00304 216 268 8.2E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 Gene3D G3DSA:1.10.287.950 284 488 6.6E-62 T 22-04-2016 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 Pfam PF02203 Tar ligand binding domain homologue 1 172 8.4E-39 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 294 316 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 PANTHER PTHR32089:SF48 1 519 1.8E-192 T 22-04-2016 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 3.5E-79 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 3.5E-79 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 3.5E-79 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 3.5E-79 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 3.5E-79 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 3.5E-79 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 3.5E-79 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 SMART SM00283 269 516 4.3E-95 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 SUPERFAMILY SSF58104 236 519 1.96E-73 T 22-04-2016 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 SUPERFAMILY SSF47170 28 180 2.09E-38 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 SMART SM00319 44 182 2.4E-8 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 515 1.1E-63 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 Gene3D G3DSA:1.20.120.30 35 179 6.1E-36 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS20180 073e729c5c1ffd65d649edc19e5d8206 549 Pfam PF00672 HAMP domain 198 263 1.2E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 Gene3D G3DSA:1.10.287.130 316 381 9.1E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 SMART SM00091 222 291 0.002 T 22-04-2016 IPR000014 PAS domain APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 427 526 5.9E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 SUPERFAMILY SSF55785 220 317 4.19E-6 T 22-04-2016 IPR000014 PAS domain APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 SUPERFAMILY SSF55874 426 527 1.57E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 PANTHER PTHR24423 23 167 6.6E-151 T 22-04-2016 APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 PANTHER PTHR24423 200 530 6.6E-151 T 22-04-2016 APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 Gene3D G3DSA:3.30.450.20 223 315 2.2E-9 T 22-04-2016 APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 SMART SM00387 424 529 3.3E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 SUPERFAMILY SSF103190 48 178 1.06E-35 T 22-04-2016 IPR029151 Periplasmic sensor domain-like APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 1.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 1.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 478 488 1.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 474 1.9E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 Gene3D G3DSA:3.30.565.10 400 531 5.9E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 Pfam PF17203 Single cache domain 3 52 178 1.4E-16 T 22-04-2016 IPR033463 Single cache domain 3 APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 PANTHER PTHR24423:SF375 23 167 6.6E-151 T 22-04-2016 APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 PANTHER PTHR24423:SF375 200 530 6.6E-151 T 22-04-2016 APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 331 375 7.1E-12 T 22-04-2016 APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 Gene3D G3DSA:3.30.450.20 41 179 3.8E-45 T 22-04-2016 APT61_RS07975 068dc9de4998a91d7b7b74fbc2d42b97 534 SUPERFAMILY SSF55890 333 456 3.4E-14 T 22-04-2016 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 SUPERFAMILY SSF51735 3 246 1.19E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 246 4.6E-58 T 22-04-2016 APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 PANTHER PTHR24322 156 190 4.8E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 PANTHER PTHR24322 6 139 4.8E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 7.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 7.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 7.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 7.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 7.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 7.3E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 7.0E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 7.0E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 7.0E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS04150 8daef16064ab2f88de9df51f5dcb2579 247 Gene3D G3DSA:3.40.50.720 3 246 4.0E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS16465 1b9ac154fa5b984af6bcde20ffe025ea 127 PANTHER PTHR28259 5 121 1.0E-43 T 22-04-2016 APT61_RS16465 1b9ac154fa5b984af6bcde20ffe025ea 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 19.535 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APT61_RS16465 1b9ac154fa5b984af6bcde20ffe025ea 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 116 4.2E-24 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APT61_RS16465 1b9ac154fa5b984af6bcde20ffe025ea 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 120 1.7E-42 T 22-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 APT61_RS13275 c838b5715b4c54d00b06c2f3ed2adbf5 137 PANTHER PTHR10173 3 127 6.6E-61 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APT61_RS13275 c838b5715b4c54d00b06c2f3ed2adbf5 137 Pfam PF01641 SelR domain 10 127 4.4E-54 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APT61_RS13275 c838b5715b4c54d00b06c2f3ed2adbf5 137 Gene3D G3DSA:2.170.150.20 4 132 1.9E-60 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APT61_RS13275 c838b5715b4c54d00b06c2f3ed2adbf5 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 129 37.751 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APT61_RS13275 c838b5715b4c54d00b06c2f3ed2adbf5 137 SUPERFAMILY SSF51316 6 131 8.89E-58 T 22-04-2016 IPR011057 Mss4-like APT61_RS13275 c838b5715b4c54d00b06c2f3ed2adbf5 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 134 2.5E-63 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 APT61_RS13275 c838b5715b4c54d00b06c2f3ed2adbf5 137 PANTHER PTHR10173:SF18 3 127 6.6E-61 T 22-04-2016 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 Gene3D G3DSA:3.40.50.740 401 642 1.6E-65 T 22-04-2016 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 Gene3D G3DSA:3.40.50.740 120 198 1.6E-65 T 22-04-2016 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 Pfam PF01568 Molydopterin dinucleotide binding domain 676 788 2.0E-27 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 507 524 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 Gene3D G3DSA:2.20.25.90 56 119 4.6E-14 T 22-04-2016 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 PANTHER PTHR11615 5 311 0.0 T 22-04-2016 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 PANTHER PTHR11615 350 794 0.0 T 22-04-2016 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 Pfam PF00384 Molybdopterin oxidoreductase 118 563 2.4E-77 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 Gene3D G3DSA:2.40.40.20 652 797 5.3E-50 T 22-04-2016 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 Gene3D G3DSA:3.40.228.10 199 400 9.5E-64 T 22-04-2016 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 PANTHER PTHR11615:SF167 5 311 0.0 T 22-04-2016 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 PANTHER PTHR11615:SF167 350 794 0.0 T 22-04-2016 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 61 115 4.9E-7 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 SMART SM00926 56 115 3.3E-8 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 712 739 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 SUPERFAMILY SSF50692 666 797 1.6E-37 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 SUPERFAMILY SSF53706 58 678 2.62E-165 T 22-04-2016 APT61_RS12760 1bd029a57622273792bb2236c6ad5d95 799 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 15 794 0.0 T 22-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 APT61_RS02175 f20ca90bdf7103e068d6e2655a42db69 206 Gene3D G3DSA:3.10.290.10 102 190 4.0E-33 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS02175 f20ca90bdf7103e068d6e2655a42db69 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 6.4E-87 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APT61_RS02175 f20ca90bdf7103e068d6e2655a42db69 206 Pfam PF01479 S4 domain 97 143 1.5E-18 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS02175 f20ca90bdf7103e068d6e2655a42db69 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 APT61_RS02175 f20ca90bdf7103e068d6e2655a42db69 206 Gene3D G3DSA:1.10.1050.10 1 101 2.4E-41 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APT61_RS02175 f20ca90bdf7103e068d6e2655a42db69 206 SMART SM00363 96 160 9.6E-21 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS02175 f20ca90bdf7103e068d6e2655a42db69 206 SUPERFAMILY SSF55174 3 206 5.5E-73 T 22-04-2016 APT61_RS02175 f20ca90bdf7103e068d6e2655a42db69 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 7.8E-31 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APT61_RS02175 f20ca90bdf7103e068d6e2655a42db69 206 PANTHER PTHR11831 1 206 3.5E-96 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 APT61_RS02175 f20ca90bdf7103e068d6e2655a42db69 206 PANTHER PTHR11831:SF4 1 206 3.5E-96 T 22-04-2016 APT61_RS02175 f20ca90bdf7103e068d6e2655a42db69 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.244 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 APT61_RS02175 f20ca90bdf7103e068d6e2655a42db69 206 SMART SM01390 3 95 1.2E-49 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 APT61_RS01820 3d566c462b67a341e7d39d090202d5ed 270 SUPERFAMILY SSF53335 5 267 4.82E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS01820 3d566c462b67a341e7d39d090202d5ed 270 Gene3D G3DSA:3.40.50.150 1 59 2.2E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS01820 3d566c462b67a341e7d39d090202d5ed 270 Gene3D G3DSA:3.40.50.150 160 266 2.2E-55 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS01820 3d566c462b67a341e7d39d090202d5ed 270 PANTHER PTHR30481:SF3 2 270 3.8E-126 T 22-04-2016 APT61_RS01820 3d566c462b67a341e7d39d090202d5ed 270 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APT61_RS01820 3d566c462b67a341e7d39d090202d5ed 270 PANTHER PTHR30481 2 270 3.8E-126 T 22-04-2016 APT61_RS01820 3d566c462b67a341e7d39d090202d5ed 270 Gene3D G3DSA:1.10.1020.10 60 157 7.2E-34 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 APT61_RS01820 3d566c462b67a341e7d39d090202d5ed 270 PIRSF PIRSF000398 1 270 1.6E-69 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 APT61_RS01820 3d566c462b67a341e7d39d090202d5ed 270 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 267 9.7E-101 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APT61_RS01820 3d566c462b67a341e7d39d090202d5ed 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 7.2E-19 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APT61_RS01820 3d566c462b67a341e7d39d090202d5ed 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 7.2E-19 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APT61_RS01820 3d566c462b67a341e7d39d090202d5ed 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 7.2E-19 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APT61_RS01820 3d566c462b67a341e7d39d090202d5ed 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 7.2E-19 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APT61_RS01820 3d566c462b67a341e7d39d090202d5ed 270 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 250 2.4E-72 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APT61_RS15495 cf16cf344f190c258b1f1e32fe3d348e 140 PANTHER PTHR33799 3 139 1.4E-59 T 22-04-2016 APT61_RS15495 cf16cf344f190c258b1f1e32fe3d348e 140 Gene3D G3DSA:3.40.50.510 3 133 2.9E-32 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APT61_RS15495 cf16cf344f190c258b1f1e32fe3d348e 140 PANTHER PTHR33799:SF4 3 139 1.4E-59 T 22-04-2016 APT61_RS15495 cf16cf344f190c258b1f1e32fe3d348e 140 SUPERFAMILY SSF53062 1 129 2.88E-32 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APT61_RS15495 cf16cf344f190c258b1f1e32fe3d348e 140 Pfam PF03610 PTS system fructose IIA component 6 115 2.0E-18 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 APT61_RS01680 c6b28b83ae9dbd2c1409abf4ac68551a 694 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 101 686 1.8E-281 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 APT61_RS01680 c6b28b83ae9dbd2c1409abf4ac68551a 694 Gene3D G3DSA:3.20.20.80 141 574 7.2E-165 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS01680 c6b28b83ae9dbd2c1409abf4ac68551a 694 Gene3D G3DSA:3.20.20.80 613 687 7.2E-165 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS01680 c6b28b83ae9dbd2c1409abf4ac68551a 694 SUPERFAMILY SSF51445 609 682 4.0E-147 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS01680 c6b28b83ae9dbd2c1409abf4ac68551a 694 SUPERFAMILY SSF51445 143 571 4.0E-147 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS01680 c6b28b83ae9dbd2c1409abf4ac68551a 694 PANTHER PTHR32438 581 693 2.2E-281 T 22-04-2016 APT61_RS01680 c6b28b83ae9dbd2c1409abf4ac68551a 694 PANTHER PTHR32438 57 562 2.2E-281 T 22-04-2016 APT61_RS01680 c6b28b83ae9dbd2c1409abf4ac68551a 694 Pfam PF02446 4-alpha-glucanotransferase 149 665 1.8E-132 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 APT61_RS01680 c6b28b83ae9dbd2c1409abf4ac68551a 694 PANTHER PTHR32438:SF5 581 693 2.2E-281 T 22-04-2016 APT61_RS01680 c6b28b83ae9dbd2c1409abf4ac68551a 694 PANTHER PTHR32438:SF5 57 562 2.2E-281 T 22-04-2016 APT61_RS21140 b7e9d0b23a294dbc6010a1897da4c2ae 257 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 46.254 T 22-04-2016 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 APT61_RS21140 b7e9d0b23a294dbc6010a1897da4c2ae 257 Pfam PF00293 NUDIX domain 132 244 9.8E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APT61_RS21140 b7e9d0b23a294dbc6010a1897da4c2ae 257 PANTHER PTHR22769 85 256 1.1E-59 T 22-04-2016 APT61_RS21140 b7e9d0b23a294dbc6010a1897da4c2ae 257 SUPERFAMILY SSF55811 79 239 1.4E-40 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS21140 b7e9d0b23a294dbc6010a1897da4c2ae 257 SUPERFAMILY SSF55811 3 96 1.4E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS21140 b7e9d0b23a294dbc6010a1897da4c2ae 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 4.2E-11 T 22-04-2016 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381 APT61_RS21140 b7e9d0b23a294dbc6010a1897da4c2ae 257 Gene3D G3DSA:3.90.79.10 93 244 2.4E-41 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS21140 b7e9d0b23a294dbc6010a1897da4c2ae 257 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APT61_RS21140 b7e9d0b23a294dbc6010a1897da4c2ae 257 PANTHER PTHR22769:SF7 85 256 1.1E-59 T 22-04-2016 APT61_RS06045 6cedcd4de66713634f05dd6b0439b877 344 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 108 1.3E-6 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APT61_RS06045 6cedcd4de66713634f05dd6b0439b877 344 Gene3D G3DSA:3.40.50.720 2 139 2.9E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06045 6cedcd4de66713634f05dd6b0439b877 344 Gene3D G3DSA:3.40.50.720 175 191 2.9E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06045 6cedcd4de66713634f05dd6b0439b877 344 SUPERFAMILY SSF51735 1 108 4.85E-11 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02240 3d75993f1d08c9f30d7fac5fc3e15f53 190 PANTHER PTHR17490 4 185 3.7E-110 T 22-04-2016 APT61_RS02240 3d75993f1d08c9f30d7fac5fc3e15f53 190 PANTHER PTHR17490:SF8 4 185 3.7E-110 T 22-04-2016 APT61_RS02240 3d75993f1d08c9f30d7fac5fc3e15f53 190 Pfam PF01300 Telomere recombination 16 182 5.0E-41 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 APT61_RS02240 3d75993f1d08c9f30d7fac5fc3e15f53 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 40.001 T 22-04-2016 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 APT61_RS02240 3d75993f1d08c9f30d7fac5fc3e15f53 190 SUPERFAMILY SSF55821 4 186 1.28E-55 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APT61_RS02240 3d75993f1d08c9f30d7fac5fc3e15f53 190 Gene3D G3DSA:3.90.870.10 3 190 8.7E-54 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 20 433 2.2E-119 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 PIRSF PIRSF037227 1 481 9.7E-227 T 22-04-2016 IPR017145 Aminobenzoyl-glutamate utilization protein B KEGG: 00240+3.5.1.-|KEGG: 00260+3.5.1.-|KEGG: 00332+3.5.1.-|KEGG: 00364+3.5.1.-|KEGG: 00480+3.5.1.-|KEGG: 00520+3.5.1.-|KEGG: 00600+3.5.1.-|KEGG: 00760+3.5.1.-|KEGG: 00930+3.5.1.- APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 PANTHER PTHR30575 378 468 7.4E-249 T 22-04-2016 APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 PANTHER PTHR30575 1 88 7.4E-249 T 22-04-2016 APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 PANTHER PTHR30575 106 331 7.4E-249 T 22-04-2016 APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 SUPERFAMILY SSF53187 300 329 1.96E-56 T 22-04-2016 APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 SUPERFAMILY SSF53187 384 449 1.96E-56 T 22-04-2016 APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 SUPERFAMILY SSF53187 7 200 1.96E-56 T 22-04-2016 APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 Gene3D G3DSA:3.40.630.10 3 187 2.7E-62 T 22-04-2016 APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 Gene3D G3DSA:3.40.630.10 384 460 2.7E-62 T 22-04-2016 APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 Gene3D G3DSA:3.40.630.10 297 329 2.7E-62 T 22-04-2016 APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 Gene3D G3DSA:3.30.70.360 191 294 6.1E-20 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 PANTHER PTHR30575:SF5 378 468 7.4E-249 T 22-04-2016 APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 PANTHER PTHR30575:SF5 1 88 7.4E-249 T 22-04-2016 APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 PANTHER PTHR30575:SF5 106 331 7.4E-249 T 22-04-2016 APT61_RS12095 170ad6f395e689863e1e81e97cef91c7 481 SUPERFAMILY SSF55031 192 293 4.78E-18 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS04805 47f58cdae95fe0927e66ae09b476e46e 337 SUPERFAMILY SSF47413 1 59 8.13E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS04805 47f58cdae95fe0927e66ae09b476e46e 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS04805 47f58cdae95fe0927e66ae09b476e46e 337 PANTHER PTHR30146:SF48 1 337 8.7E-136 T 22-04-2016 APT61_RS04805 47f58cdae95fe0927e66ae09b476e46e 337 PANTHER PTHR30146 1 337 8.7E-136 T 22-04-2016 APT61_RS04805 47f58cdae95fe0927e66ae09b476e46e 337 SMART SM00354 1 71 5.2E-37 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS04805 47f58cdae95fe0927e66ae09b476e46e 337 Gene3D G3DSA:3.40.50.2300 58 168 3.4E-38 T 22-04-2016 APT61_RS04805 47f58cdae95fe0927e66ae09b476e46e 337 Gene3D G3DSA:3.40.50.2300 169 331 9.2E-49 T 22-04-2016 APT61_RS04805 47f58cdae95fe0927e66ae09b476e46e 337 Pfam PF13377 Periplasmic binding protein-like domain 172 331 4.7E-30 T 22-04-2016 APT61_RS04805 47f58cdae95fe0927e66ae09b476e46e 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 8.0E-22 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS04805 47f58cdae95fe0927e66ae09b476e46e 337 Gene3D G3DSA:1.10.260.40 2 57 4.8E-27 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS04805 47f58cdae95fe0927e66ae09b476e46e 337 SUPERFAMILY SSF53822 60 335 1.06E-69 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS14305 bb7d4a29f887439990e02ddf42a9fa2c 286 PANTHER PTHR13903 1 286 1.1E-175 T 22-04-2016 IPR012093 Pirin APT61_RS14305 bb7d4a29f887439990e02ddf42a9fa2c 286 Pfam PF05726 Pirin C-terminal cupin domain 183 284 1.2E-30 T 22-04-2016 IPR008778 Pirin, C-terminal domain APT61_RS14305 bb7d4a29f887439990e02ddf42a9fa2c 286 SUPERFAMILY SSF51182 5 285 4.38E-86 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS14305 bb7d4a29f887439990e02ddf42a9fa2c 286 Gene3D G3DSA:2.60.120.10 8 257 1.3E-83 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS14305 bb7d4a29f887439990e02ddf42a9fa2c 286 PIRSF PIRSF006232 2 286 6.9E-93 T 22-04-2016 IPR012093 Pirin APT61_RS14305 bb7d4a29f887439990e02ddf42a9fa2c 286 Pfam PF02678 Pirin 20 127 1.5E-34 T 22-04-2016 IPR003829 Pirin, N-terminal domain APT61_RS14305 bb7d4a29f887439990e02ddf42a9fa2c 286 PANTHER PTHR13903:SF12 1 286 1.1E-175 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 Gene3D G3DSA:3.50.50.60 2 137 5.3E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PIRSF PIRSF000350 1 447 2.7E-84 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 SUPERFAMILY SSF51905 1 365 1.24E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 SUPERFAMILY SSF55424 336 450 2.75E-36 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 Gene3D G3DSA:3.50.50.60 138 326 1.1E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PANTHER PTHR22912 1 450 3.7E-253 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 318 7.3E-67 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 3.7E-66 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 3.7E-66 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.7E-66 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 3.7E-66 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 3.7E-66 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.7E-66 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 3.7E-66 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 3.7E-66 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 3.7E-66 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 3.4E-214 T 22-04-2016 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PANTHER PTHR22912:SF106 1 450 3.7E-253 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 1.9E-28 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 1.9E-28 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.9E-28 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.9E-28 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 1.9E-28 T 22-04-2016 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 7.4E-35 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APT61_RS01270 c115845f7b9271d9cba165837282d62d 450 Gene3D G3DSA:3.30.390.30 338 450 8.5E-45 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 APT61_RS20780 155169c4c384c2e574f0b0183a0947d5 652 Gene3D G3DSA:3.40.50.980 267 424 5.0E-28 T 22-04-2016 APT61_RS20780 155169c4c384c2e574f0b0183a0947d5 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 6.9E-26 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APT61_RS20780 155169c4c384c2e574f0b0183a0947d5 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 52.928 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 APT61_RS20780 155169c4c384c2e574f0b0183a0947d5 652 Gene3D G3DSA:2.30.38.10 439 515 1.3E-8 T 22-04-2016 APT61_RS20780 155169c4c384c2e574f0b0183a0947d5 652 Gene3D G3DSA:3.30.300.30 518 633 1.4E-29 T 22-04-2016 APT61_RS20780 155169c4c384c2e574f0b0183a0947d5 652 PANTHER PTHR24095 20 643 0.0 T 22-04-2016 APT61_RS20780 155169c4c384c2e574f0b0183a0947d5 652 PANTHER PTHR24095:SF178 20 643 0.0 T 22-04-2016 APT61_RS20780 155169c4c384c2e574f0b0183a0947d5 652 Gene3D G3DSA:3.40.50.980 79 266 1.9E-45 T 22-04-2016 APT61_RS20780 155169c4c384c2e574f0b0183a0947d5 652 SUPERFAMILY SSF56801 8 643 9.03E-191 T 22-04-2016 APT61_RS20780 155169c4c384c2e574f0b0183a0947d5 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 22-04-2016 IPR020845 AMP-binding, conserved site APT61_RS20780 155169c4c384c2e574f0b0183a0947d5 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 22-04-2016 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118|Reactome: REACT_13433 APT61_RS20780 155169c4c384c2e574f0b0183a0947d5 652 Pfam PF00501 AMP-binding enzyme 83 522 1.5E-92 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APT61_RS20780 155169c4c384c2e574f0b0183a0947d5 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 4.5E-18 T 22-04-2016 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-6672|MetaCyc: PWY-7118 APT61_RS00080 22ae683d2d99615e5b33fb8856b29729 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS00080 22ae683d2d99615e5b33fb8856b29729 327 SMART SM00354 1 68 4.7E-32 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS00080 22ae683d2d99615e5b33fb8856b29729 327 Pfam PF13377 Periplasmic binding protein-like domain 166 327 3.1E-43 T 22-04-2016 APT61_RS00080 22ae683d2d99615e5b33fb8856b29729 327 PANTHER PTHR30146:SF38 1 327 9.5E-234 T 22-04-2016 APT61_RS00080 22ae683d2d99615e5b33fb8856b29729 327 SUPERFAMILY SSF47413 1 56 5.25E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS00080 22ae683d2d99615e5b33fb8856b29729 327 SUPERFAMILY SSF53822 57 327 9.06E-91 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS00080 22ae683d2d99615e5b33fb8856b29729 327 Gene3D G3DSA:3.40.50.2300 51 173 2.4E-43 T 22-04-2016 APT61_RS00080 22ae683d2d99615e5b33fb8856b29729 327 PANTHER PTHR30146 1 327 9.5E-234 T 22-04-2016 APT61_RS00080 22ae683d2d99615e5b33fb8856b29729 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 45 2.7E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS00080 22ae683d2d99615e5b33fb8856b29729 327 Gene3D G3DSA:3.40.50.2300 174 306 8.2E-56 T 22-04-2016 APT61_RS00080 22ae683d2d99615e5b33fb8856b29729 327 Gene3D G3DSA:1.10.260.40 1 50 8.3E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS08800 286b334c945671d6e612cc837c32769b 265 PANTHER PTHR32502 1 265 7.9E-176 T 22-04-2016 APT61_RS08800 286b334c945671d6e612cc837c32769b 265 Pfam PF03609 PTS system sorbose-specific iic component 6 237 9.7E-76 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APT61_RS08800 286b334c945671d6e612cc837c32769b 265 PANTHER PTHR32502:SF4 1 265 7.9E-176 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APT61_RS08800 286b334c945671d6e612cc837c32769b 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 265 2.1E-126 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.2E-98 T 22-04-2016 APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 1.2E-98 T 22-04-2016 APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 1.2E-98 T 22-04-2016 APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 1.2E-98 T 22-04-2016 APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 1.2E-98 T 22-04-2016 APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 1.2E-98 T 22-04-2016 APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 1.2E-98 T 22-04-2016 APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.2E-98 T 22-04-2016 APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.2E-98 T 22-04-2016 APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 2.1E-141 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 PANTHER PTHR10906 18 444 6.2E-236 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 SUPERFAMILY SSF103491 16 424 7.98E-134 T 22-04-2016 IPR023201 SecY subunit domain APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 30.065 T 22-04-2016 IPR026593 Protein translocase subunit SecY APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 PIRSF PIRSF004557 11 441 2.7E-123 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 Gene3D G3DSA:1.10.3370.10 17 437 2.7E-167 T 22-04-2016 IPR023201 SecY subunit domain APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 Pfam PF00344 SecY translocase 76 417 1.1E-119 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 22-04-2016 IPR030659 SecY conserved site APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 22-04-2016 IPR030659 SecY conserved site APT61_RS02160 8eb418e91eb80c788dcddf7313c0b010 444 PANTHER PTHR10906:SF2 18 444 6.2E-236 T 22-04-2016 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 PANTHER PTHR22642 24 296 3.6E-253 T 22-04-2016 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 PANTHER PTHR22642 320 501 3.6E-253 T 22-04-2016 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 PANTHER PTHR22642:SF7 24 296 3.6E-253 T 22-04-2016 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 PANTHER PTHR22642:SF7 320 501 3.6E-253 T 22-04-2016 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 SUPERFAMILY SSF51338 1 177 3.54E-65 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 SUPERFAMILY SSF51338 414 477 8.55E-7 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 119 2.6E-56 T 22-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 SUPERFAMILY SSF51556 130 431 1.51E-195 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 SUPERFAMILY SSF51556 480 567 1.51E-195 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 2.6E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 2.6E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 2.6E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 2.6E-34 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 Hamap MF_01953 Urease subunit alpha [ureC]. 2 567 56.825 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 Gene3D G3DSA:2.30.40.10 68 143 1.3E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 Pfam PF01979 Amidohydrolase family 125 453 1.2E-82 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 ProSitePatterns PS01120 Urease nickel ligands signature. 127 140 - T 22-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 ProSitePatterns PS00145 Urease active site. 317 333 - T 22-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 3 567 6.9E-291 T 22-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 Gene3D G3DSA:3.20.20.140 144 429 9.8E-207 T 22-04-2016 APT61_RS03485 7d67626f5d4e651fa72690499e6445b0 567 Gene3D G3DSA:3.20.20.140 488 565 9.8E-207 T 22-04-2016 APT61_RS14455 e44bd1cd766a9393507e5a5350bee503 642 SUPERFAMILY SSF141868 399 633 4.97E-87 T 22-04-2016 IPR001633 EAL domain APT61_RS14455 e44bd1cd766a9393507e5a5350bee503 642 Pfam PF00563 EAL domain 404 631 4.5E-75 T 22-04-2016 IPR001633 EAL domain APT61_RS14455 e44bd1cd766a9393507e5a5350bee503 642 Pfam PF00990 Diguanylate cyclase, GGDEF domain 226 379 4.4E-40 T 22-04-2016 IPR000160 GGDEF domain APT61_RS14455 e44bd1cd766a9393507e5a5350bee503 642 PANTHER PTHR33121:SF10 390 633 1.4E-73 T 22-04-2016 APT61_RS14455 e44bd1cd766a9393507e5a5350bee503 642 SMART SM00267 214 384 1.3E-47 T 22-04-2016 IPR000160 GGDEF domain APT61_RS14455 e44bd1cd766a9393507e5a5350bee503 642 PANTHER PTHR33121 390 633 1.4E-73 T 22-04-2016 APT61_RS14455 e44bd1cd766a9393507e5a5350bee503 642 Gene3D G3DSA:3.20.20.450 398 633 1.4E-90 T 22-04-2016 IPR001633 EAL domain APT61_RS14455 e44bd1cd766a9393507e5a5350bee503 642 SMART SM00052 394 636 9.8E-109 T 22-04-2016 IPR001633 EAL domain APT61_RS14455 e44bd1cd766a9393507e5a5350bee503 642 Gene3D G3DSA:3.30.70.270 226 391 1.9E-48 T 22-04-2016 APT61_RS14455 e44bd1cd766a9393507e5a5350bee503 642 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 383 9.9E-37 T 22-04-2016 IPR000160 GGDEF domain APT61_RS14455 e44bd1cd766a9393507e5a5350bee503 642 SUPERFAMILY SSF55073 230 385 7.77E-42 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS16745 de10d6c6dd7c9a8872c7ad4384c3af8b 438 TIGRFAM TIGR02564 cas_Csy1: CRISPR type I-F/YPEST-associated protein Csy1 52 426 2.2E-124 T 22-04-2016 IPR013397 CRISPR-associated protein Csy1 APT61_RS16745 de10d6c6dd7c9a8872c7ad4384c3af8b 438 Pfam PF09611 CRISPR-associated protein (Cas_Csy1) 53 416 4.8E-125 T 22-04-2016 IPR013397 CRISPR-associated protein Csy1 APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 Pfam PF00708 Acylphosphatase 8 87 2.0E-16 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 SUPERFAMILY SSF53067 637 738 3.78E-6 T 22-04-2016 APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 SUPERFAMILY SSF53067 590 610 3.78E-6 T 22-04-2016 APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 SUPERFAMILY SSF53067 429 524 3.78E-6 T 22-04-2016 APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 Gene3D G3DSA:3.90.870.10 195 368 2.2E-42 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 PIRSF PIRSF006256 1 741 1.0E-261 T 22-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 PANTHER PTHR10029 8 738 0.0 T 22-04-2016 APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 PANTHER PTHR10029:SF4 8 738 0.0 T 22-04-2016 APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 Gene3D G3DSA:3.30.70.100 7 87 1.8E-23 T 22-04-2016 APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 Pfam PF01300 Telomere recombination 206 371 1.1E-45 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 SUPERFAMILY SSF54975 6 87 6.54E-19 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 Pfam PF07503 HypF finger 105 138 6.0E-16 T 22-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 Pfam PF07503 HypF finger 155 188 3.7E-18 T 22-04-2016 IPR011125 Zinc finger, HypF-type GO:0008270 UniPathway: UPA00335 APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 SUPERFAMILY SSF55821 172 377 5.19E-43 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain APT61_RS05065 acfa24f19768a576358a34b83fb4871a 741 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 8 736 1.2E-266 T 22-04-2016 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 UniPathway: UPA00335 APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 PANTHER PTHR24423 77 343 1.6E-112 T 22-04-2016 APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 SUPERFAMILY SSF47384 120 194 1.29E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 275 289 3.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 306 324 3.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 293 303 3.4E-10 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 SUPERFAMILY SSF55874 186 344 6.16E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 SMART SM00304 83 135 0.0011 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 238 344 3.7E-21 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 Pfam PF00672 HAMP domain 64 131 4.4E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 Gene3D G3DSA:1.10.287.130 128 192 5.3E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 Gene3D G3DSA:3.30.565.10 211 345 7.7E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 PANTHER PTHR24423:SF538 77 343 1.6E-112 T 22-04-2016 APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 194 7.5E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 SMART SM00387 238 346 4.0E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS02740 2146a33692c0e50222ff0c97a6877be3 347 SMART SM00388 136 196 3.5E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS10035 8a106a1478776e4449ee161cb96e3ef8 248 SUPERFAMILY SSF47240 2 241 1.22E-85 T 22-04-2016 IPR009078 Ferritin-like superfamily APT61_RS10035 8a106a1478776e4449ee161cb96e3ef8 248 PANTHER PTHR30458 1 248 2.2E-126 T 22-04-2016 APT61_RS10035 8a106a1478776e4449ee161cb96e3ef8 248 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 11 248 1.7E-107 T 22-04-2016 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 UniPathway: UPA00930 APT61_RS10035 8a106a1478776e4449ee161cb96e3ef8 248 Gene3D G3DSA:1.20.1260.10 2 248 1.7E-100 T 22-04-2016 IPR012347 Ferritin-related APT61_RS10035 8a106a1478776e4449ee161cb96e3ef8 248 PANTHER PTHR30458:SF1 1 248 2.2E-126 T 22-04-2016 APT61_RS10035 8a106a1478776e4449ee161cb96e3ef8 248 PIRSF PIRSF037834 1 248 4.0E-103 T 22-04-2016 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 UniPathway: UPA00930 APT61_RS10035 8a106a1478776e4449ee161cb96e3ef8 248 Pfam PF05138 Phenylacetic acid catabolic protein 2 248 3.0E-97 T 22-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 APT61_RS21025 846066da9846e8d58a70af60905c39f8 524 Gene3D G3DSA:1.10.8.60 366 443 1.6E-15 T 22-04-2016 APT61_RS21025 846066da9846e8d58a70af60905c39f8 524 PANTHER PTHR32071:SF14 8 523 1.9E-266 T 22-04-2016 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 APT61_RS21025 846066da9846e8d58a70af60905c39f8 524 Pfam PF00158 Sigma-54 interaction domain 192 357 1.2E-48 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APT61_RS21025 846066da9846e8d58a70af60905c39f8 524 Gene3D G3DSA:3.40.50.300 193 362 9.4E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21025 846066da9846e8d58a70af60905c39f8 524 PIRSF PIRSF037354 2 522 5.1E-262 T 22-04-2016 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 APT61_RS21025 846066da9846e8d58a70af60905c39f8 524 Pfam PF06956 Regulator of RNA terminal phosphate cyclase 3 188 1.4E-83 T 22-04-2016 IPR009715 Regulator of RNA terminal phosphate cyclase APT61_RS21025 846066da9846e8d58a70af60905c39f8 524 PANTHER PTHR32071 8 523 1.9E-266 T 22-04-2016 APT61_RS21025 846066da9846e8d58a70af60905c39f8 524 SMART SM00382 210 355 2.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS21025 846066da9846e8d58a70af60905c39f8 524 SUPERFAMILY SSF52540 192 441 5.78E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07265 4491113814c7bc6114c560c1a9aa1883 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS07265 4491113814c7bc6114c560c1a9aa1883 506 SUPERFAMILY SSF52540 12 236 6.31E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07265 4491113814c7bc6114c560c1a9aa1883 506 PANTHER PTHR24220 15 388 5.6E-293 T 22-04-2016 APT61_RS07265 4491113814c7bc6114c560c1a9aa1883 506 SMART SM00382 288 483 0.6 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS07265 4491113814c7bc6114c560c1a9aa1883 506 SMART SM00382 38 233 1.2E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS07265 4491113814c7bc6114c560c1a9aa1883 506 Pfam PF00005 ABC transporter 280 434 3.4E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS07265 4491113814c7bc6114c560c1a9aa1883 506 Pfam PF00005 ABC transporter 29 178 6.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS07265 4491113814c7bc6114c560c1a9aa1883 506 Gene3D G3DSA:3.40.50.300 10 240 1.2E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07265 4491113814c7bc6114c560c1a9aa1883 506 Gene3D G3DSA:3.40.50.300 263 497 2.0E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07265 4491113814c7bc6114c560c1a9aa1883 506 PANTHER PTHR24220:SF303 15 388 5.6E-293 T 22-04-2016 APT61_RS07265 4491113814c7bc6114c560c1a9aa1883 506 SUPERFAMILY SSF52540 252 486 4.36E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02770 7f9e341d108dd60c4e80bb4507ad8e3d 644 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 1.5E-247 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APT61_RS02770 7f9e341d108dd60c4e80bb4507ad8e3d 644 SUPERFAMILY SSF140990 402 602 1.14E-72 T 22-04-2016 APT61_RS02770 7f9e341d108dd60c4e80bb4507ad8e3d 644 PANTHER PTHR23076 1 629 0.0 T 22-04-2016 APT61_RS02770 7f9e341d108dd60c4e80bb4507ad8e3d 644 Gene3D G3DSA:1.10.8.60 332 406 4.6E-29 T 22-04-2016 APT61_RS02770 7f9e341d108dd60c4e80bb4507ad8e3d 644 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 5.2E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS02770 7f9e341d108dd60c4e80bb4507ad8e3d 644 SUPERFAMILY SSF52540 141 391 1.5E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02770 7f9e341d108dd60c4e80bb4507ad8e3d 644 Gene3D G3DSA:3.40.50.300 144 331 3.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02770 7f9e341d108dd60c4e80bb4507ad8e3d 644 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 616 37.436 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 APT61_RS02770 7f9e341d108dd60c4e80bb4507ad8e3d 644 Pfam PF06480 FtsH Extracellular 5 93 3.5E-17 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 APT61_RS02770 7f9e341d108dd60c4e80bb4507ad8e3d 644 SMART SM00382 184 323 1.9E-26 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS02770 7f9e341d108dd60c4e80bb4507ad8e3d 644 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 APT61_RS02770 7f9e341d108dd60c4e80bb4507ad8e3d 644 Pfam PF01434 Peptidase family M41 382 591 1.2E-82 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 APT61_RS10430 c238690abdc93c1d0763e39a45b577ef 459 Gene3D G3DSA:1.20.1250.20 256 449 1.0E-16 T 22-04-2016 APT61_RS10430 c238690abdc93c1d0763e39a45b577ef 459 PANTHER PTHR23501 1 458 3.8E-167 T 22-04-2016 APT61_RS10430 c238690abdc93c1d0763e39a45b577ef 459 SUPERFAMILY SSF103473 3 188 7.59E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS10430 c238690abdc93c1d0763e39a45b577ef 459 SUPERFAMILY SSF103473 241 446 7.59E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS10430 c238690abdc93c1d0763e39a45b577ef 459 PANTHER PTHR23501:SF38 1 458 3.8E-167 T 22-04-2016 APT61_RS10430 c238690abdc93c1d0763e39a45b577ef 459 Pfam PF07690 Major Facilitator Superfamily 12 402 2.3E-48 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS10430 c238690abdc93c1d0763e39a45b577ef 459 Gene3D G3DSA:1.20.1250.20 3 190 4.4E-29 T 22-04-2016 APT61_RS15130 c8160d681dd9e451f6d19b6fa2c92c42 550 PANTHER PTHR30109:SF0 1 549 0.0 T 22-04-2016 APT61_RS15130 c8160d681dd9e451f6d19b6fa2c92c42 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 1.0E-154 T 22-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 APT61_RS15130 c8160d681dd9e451f6d19b6fa2c92c42 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 21.353 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 APT61_RS15130 c8160d681dd9e451f6d19b6fa2c92c42 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 1.4E-229 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 APT61_RS15130 c8160d681dd9e451f6d19b6fa2c92c42 550 Gene3D G3DSA:3.40.50.2030 234 379 2.1E-64 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APT61_RS15130 c8160d681dd9e451f6d19b6fa2c92c42 550 PANTHER PTHR30109 1 549 0.0 T 22-04-2016 APT61_RS15130 c8160d681dd9e451f6d19b6fa2c92c42 550 PIRSF PIRSF000076 1 550 8.6E-238 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 APT61_RS15130 c8160d681dd9e451f6d19b6fa2c92c42 550 SUPERFAMILY SSF56821 1 548 2.09E-189 T 22-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 APT61_RS15130 c8160d681dd9e451f6d19b6fa2c92c42 550 Gene3D G3DSA:1.20.1270.20 159 232 4.1E-25 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APT61_RS15130 c8160d681dd9e451f6d19b6fa2c92c42 550 Gene3D G3DSA:3.40.50.2030 380 547 1.4E-68 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APT61_RS15130 c8160d681dd9e451f6d19b6fa2c92c42 550 Gene3D G3DSA:1.20.1270.20 1 158 6.2E-37 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 APT61_RS05570 90617b7b0c5ff69664af01fcd15991a7 428 PANTHER PTHR22777 1 428 6.1E-154 T 22-04-2016 APT61_RS05570 90617b7b0c5ff69664af01fcd15991a7 428 Pfam PF03471 Transporter associated domain 344 418 6.9E-19 T 22-04-2016 IPR005170 Transporter-associated domain APT61_RS05570 90617b7b0c5ff69664af01fcd15991a7 428 Pfam PF00571 CBS domain 271 326 3.1E-5 T 22-04-2016 IPR000644 CBS domain APT61_RS05570 90617b7b0c5ff69664af01fcd15991a7 428 SUPERFAMILY SSF54631 192 329 1.64E-22 T 22-04-2016 APT61_RS05570 90617b7b0c5ff69664af01fcd15991a7 428 SMART SM01091 342 420 9.5E-25 T 22-04-2016 IPR005170 Transporter-associated domain APT61_RS05570 90617b7b0c5ff69664af01fcd15991a7 428 Pfam PF01595 Domain of unknown function DUF21 13 184 1.3E-49 T 22-04-2016 IPR002550 Domain of unknown function DUF21 APT61_RS05570 90617b7b0c5ff69664af01fcd15991a7 428 Gene3D G3DSA:3.30.465.10 319 418 4.8E-26 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APT61_RS05570 90617b7b0c5ff69664af01fcd15991a7 428 Gene3D G3DSA:3.10.580.10 191 318 8.4E-12 T 22-04-2016 APT61_RS05570 90617b7b0c5ff69664af01fcd15991a7 428 SUPERFAMILY SSF56176 340 422 2.07E-21 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APT61_RS04725 43cd4ce1f9dcccda0e385239944bc5ee 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 22-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS04725 43cd4ce1f9dcccda0e385239944bc5ee 159 PANTHER PTHR32125 1 159 4.3E-63 T 22-04-2016 APT61_RS04725 43cd4ce1f9dcccda0e385239944bc5ee 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.928 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS04725 43cd4ce1f9dcccda0e385239944bc5ee 159 Pfam PF02542 YgbB family 1 154 1.2E-66 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS04725 43cd4ce1f9dcccda0e385239944bc5ee 159 Gene3D G3DSA:3.30.1330.50 1 156 1.6E-73 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS04725 43cd4ce1f9dcccda0e385239944bc5ee 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 6.2E-72 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS04725 43cd4ce1f9dcccda0e385239944bc5ee 159 SUPERFAMILY SSF69765 1 156 1.83E-66 T 22-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS15090 ca65a10c114cc9ce404bc828ae6e3bd8 106 SUPERFAMILY SSF54736 22 105 5.75E-33 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APT61_RS15090 ca65a10c114cc9ce404bc828ae6e3bd8 106 Gene3D G3DSA:3.30.1390.10 4 106 1.1E-44 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APT61_RS15090 ca65a10c114cc9ce404bc828ae6e3bd8 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 5.6E-34 T 22-04-2016 IPR003769 Adaptor protein ClpS, core GO:0030163 APT61_RS15090 ca65a10c114cc9ce404bc828ae6e3bd8 106 PANTHER PTHR33473 1 106 5.1E-47 T 22-04-2016 APT61_RS15090 ca65a10c114cc9ce404bc828ae6e3bd8 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 14 101 28.437 T 22-04-2016 IPR022935 ATP-dependent Clp protease adaptor protein ClpS APT61_RS02450 c8705382fdcf2b2befe3029ce61c4804 655 PANTHER PTHR30509:SF10 7 255 0.0 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 APT61_RS02450 c8705382fdcf2b2befe3029ce61c4804 655 PANTHER PTHR30509:SF10 305 638 0.0 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 APT61_RS02450 c8705382fdcf2b2befe3029ce61c4804 655 Pfam PF04632 Fusaric acid resistance protein family 11 654 2.9E-161 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APT61_RS02450 c8705382fdcf2b2befe3029ce61c4804 655 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 3 653 54.918 T 22-04-2016 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 APT61_RS02450 c8705382fdcf2b2befe3029ce61c4804 655 PANTHER PTHR30509 7 255 0.0 T 22-04-2016 APT61_RS02450 c8705382fdcf2b2befe3029ce61c4804 655 PANTHER PTHR30509 305 638 0.0 T 22-04-2016 APT61_RS16375 60792f1d8caaeff59d5350d45b9387cd 311 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 300 3.5E-77 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APT61_RS16375 60792f1d8caaeff59d5350d45b9387cd 311 PANTHER PTHR12304 1 311 3.2E-192 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase APT61_RS16375 60792f1d8caaeff59d5350d45b9387cd 311 SUPERFAMILY SSF53590 4 308 6.02E-107 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APT61_RS16375 60792f1d8caaeff59d5350d45b9387cd 311 Hamap MF_01431 Pyrimidine-specific ribonucleoside hydrolase RihA [rihA]. 1 311 75.581 T 22-04-2016 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA GO:0005737|GO:0006206|GO:0008152|GO:0015949|GO:0016787|GO:0016798|GO:0045437 APT61_RS16375 60792f1d8caaeff59d5350d45b9387cd 311 Gene3D G3DSA:3.90.245.10 4 308 2.5E-117 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain APT61_RS16375 60792f1d8caaeff59d5350d45b9387cd 311 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 22-04-2016 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 APT61_RS16375 60792f1d8caaeff59d5350d45b9387cd 311 PANTHER PTHR12304:SF19 1 311 3.2E-192 T 22-04-2016 APT61_RS03995 fa672b65b8cac290ba9f286ea763afbf 186 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 186 38.574 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 APT61_RS03995 fa672b65b8cac290ba9f286ea763afbf 186 PANTHER PTHR30327:SF1 1 186 8.6E-69 T 22-04-2016 APT61_RS03995 fa672b65b8cac290ba9f286ea763afbf 186 Gene3D G3DSA:3.30.70.1300 41 129 1.2E-25 T 22-04-2016 APT61_RS03995 fa672b65b8cac290ba9f286ea763afbf 186 Gene3D G3DSA:3.40.1740.10 2 40 4.4E-34 T 22-04-2016 APT61_RS03995 fa672b65b8cac290ba9f286ea763afbf 186 Gene3D G3DSA:3.40.1740.10 130 176 4.4E-34 T 22-04-2016 APT61_RS03995 fa672b65b8cac290ba9f286ea763afbf 186 Pfam PF02622 Uncharacterized ACR, COG1678 12 173 5.6E-48 T 22-04-2016 IPR003774 Protein of unknown function UPF0301 APT61_RS03995 fa672b65b8cac290ba9f286ea763afbf 186 SUPERFAMILY SSF143456 1 186 1.57E-62 T 22-04-2016 APT61_RS03995 fa672b65b8cac290ba9f286ea763afbf 186 PANTHER PTHR30327 1 186 8.6E-69 T 22-04-2016 APT61_RS18180 460052d3ed8e46da8ba147f488c401c8 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.47 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS18180 460052d3ed8e46da8ba147f488c401c8 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 8.7E-62 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS18180 460052d3ed8e46da8ba147f488c401c8 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS18180 460052d3ed8e46da8ba147f488c401c8 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS18180 460052d3ed8e46da8ba147f488c401c8 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS18180 460052d3ed8e46da8ba147f488c401c8 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS18180 460052d3ed8e46da8ba147f488c401c8 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS18180 460052d3ed8e46da8ba147f488c401c8 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.2E-50 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS18180 460052d3ed8e46da8ba147f488c401c8 319 Gene3D G3DSA:3.90.226.10 59 276 7.3E-50 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS18180 460052d3ed8e46da8ba147f488c401c8 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.1E-172 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS18180 460052d3ed8e46da8ba147f488c401c8 319 PANTHER PTHR22855 1 317 6.9E-134 T 22-04-2016 APT61_RS18180 460052d3ed8e46da8ba147f488c401c8 319 SUPERFAMILY SSF52096 5 318 2.67E-103 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS05055 16a436f26dd0a77d8cf6211ca5fa3b00 181 Gene3D G3DSA:1.10.1060.10 97 144 9.5E-7 T 22-04-2016 APT61_RS05055 16a436f26dd0a77d8cf6211ca5fa3b00 181 Gene3D G3DSA:3.30.70.20 66 96 6.7E-20 T 22-04-2016 APT61_RS05055 16a436f26dd0a77d8cf6211ca5fa3b00 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS05055 16a436f26dd0a77d8cf6211ca5fa3b00 181 Gene3D G3DSA:3.30.70.20 4 65 1.1E-15 T 22-04-2016 APT61_RS05055 16a436f26dd0a77d8cf6211ca5fa3b00 181 Gene3D G3DSA:3.30.70.20 145 165 1.1E-15 T 22-04-2016 APT61_RS05055 16a436f26dd0a77d8cf6211ca5fa3b00 181 SUPERFAMILY SSF54862 1 170 1.84E-44 T 22-04-2016 APT61_RS05055 16a436f26dd0a77d8cf6211ca5fa3b00 181 PANTHER PTHR11938:SF111 1 157 6.5E-71 T 22-04-2016 APT61_RS05055 16a436f26dd0a77d8cf6211ca5fa3b00 181 Pfam PF12838 4Fe-4S dicluster domain 88 151 2.9E-8 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS05055 16a436f26dd0a77d8cf6211ca5fa3b00 181 PANTHER PTHR11938 1 157 6.5E-71 T 22-04-2016 APT61_RS02075 1222dfa2ea921910843a6bba597e2009 273 Gene3D G3DSA:2.30.30.30 119 195 4.8E-34 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 APT61_RS02075 1222dfa2ea921910843a6bba597e2009 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.7E-34 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02075 1222dfa2ea921910843a6bba597e2009 273 SMART SM01383 42 118 1.9E-48 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02075 1222dfa2ea921910843a6bba597e2009 273 Gene3D G3DSA:2.40.50.140 1 114 1.0E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS02075 1222dfa2ea921910843a6bba597e2009 273 SUPERFAMILY SSF50104 127 269 1.87E-59 T 22-04-2016 IPR008991 Translation protein SH3-like domain APT61_RS02075 1222dfa2ea921910843a6bba597e2009 273 SUPERFAMILY SSF50249 3 125 5.48E-50 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS02075 1222dfa2ea921910843a6bba597e2009 273 PIRSF PIRSF002158 12 273 4.3E-100 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02075 1222dfa2ea921910843a6bba597e2009 273 PANTHER PTHR13691 1 273 7.9E-148 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02075 1222dfa2ea921910843a6bba597e2009 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 2.1E-55 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APT61_RS02075 1222dfa2ea921910843a6bba597e2009 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 APT61_RS02075 1222dfa2ea921910843a6bba597e2009 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.056 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APT61_RS02075 1222dfa2ea921910843a6bba597e2009 273 SMART SM01382 124 251 5.1E-89 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 APT61_RS02075 1222dfa2ea921910843a6bba597e2009 273 Gene3D G3DSA:4.10.950.10 196 272 1.8E-34 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 APT61_RS02075 1222dfa2ea921910843a6bba597e2009 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 272 1.3E-131 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 APT61_RS06155 4e904c24da6b3e91c081b15bb4fe5d2d 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 405 1.3E-129 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APT61_RS06155 4e904c24da6b3e91c081b15bb4fe5d2d 429 Pfam PF00860 Permease family 16 383 4.4E-106 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS06155 4e904c24da6b3e91c081b15bb4fe5d2d 429 PANTHER PTHR11119 1 426 1.3E-176 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS06155 4e904c24da6b3e91c081b15bb4fe5d2d 429 PANTHER PTHR11119:SF49 1 426 1.3E-176 T 22-04-2016 APT61_RS06155 4e904c24da6b3e91c081b15bb4fe5d2d 429 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APT61_RS18855 3426f4cf992d56496398420356fbd586 968 Gene3D G3DSA:3.40.50.300 154 323 9.0E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18855 3426f4cf992d56496398420356fbd586 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 3.9E-20 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 APT61_RS18855 3426f4cf992d56496398420356fbd586 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 72.001 T 22-04-2016 IPR023949 RNA polymerase-associated protein RapA GO:0006355 APT61_RS18855 3426f4cf992d56496398420356fbd586 968 SMART SM00490 517 601 1.9E-18 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS18855 3426f4cf992d56496398420356fbd586 968 SUPERFAMILY SSF52540 480 645 4.75E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18855 3426f4cf992d56496398420356fbd586 968 SUPERFAMILY SSF52540 273 337 4.75E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18855 3426f4cf992d56496398420356fbd586 968 SUPERFAMILY SSF52540 124 374 2.89E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18855 3426f4cf992d56496398420356fbd586 968 PANTHER PTHR10799 884 960 1.3E-261 T 22-04-2016 APT61_RS18855 3426f4cf992d56496398420356fbd586 968 PANTHER PTHR10799 150 354 1.3E-261 T 22-04-2016 APT61_RS18855 3426f4cf992d56496398420356fbd586 968 PANTHER PTHR10799 799 840 1.3E-261 T 22-04-2016 APT61_RS18855 3426f4cf992d56496398420356fbd586 968 PANTHER PTHR10799 395 694 1.3E-261 T 22-04-2016 APT61_RS18855 3426f4cf992d56496398420356fbd586 968 Gene3D G3DSA:3.40.50.300 484 626 8.0E-21 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18855 3426f4cf992d56496398420356fbd586 968 SMART SM00487 150 346 4.5E-20 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS18855 3426f4cf992d56496398420356fbd586 968 PANTHER PTHR10799:SF610 884 960 1.3E-261 T 22-04-2016 APT61_RS18855 3426f4cf992d56496398420356fbd586 968 PANTHER PTHR10799:SF610 150 354 1.3E-261 T 22-04-2016 APT61_RS18855 3426f4cf992d56496398420356fbd586 968 PANTHER PTHR10799:SF610 799 840 1.3E-261 T 22-04-2016 APT61_RS18855 3426f4cf992d56496398420356fbd586 968 PANTHER PTHR10799:SF610 395 694 1.3E-261 T 22-04-2016 APT61_RS18855 3426f4cf992d56496398420356fbd586 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 8.2E-157 T 22-04-2016 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 APT61_RS18855 3426f4cf992d56496398420356fbd586 968 Pfam PF00271 Helicase conserved C-terminal domain 494 601 7.2E-15 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS03800 08508c0bb01137ec5607a31e5aa2bcb8 327 SUPERFAMILY SSF55785 37 150 1.27E-20 T 22-04-2016 IPR000014 PAS domain APT61_RS03800 08508c0bb01137ec5607a31e5aa2bcb8 327 PANTHER PTHR10799 177 309 3.3E-21 T 22-04-2016 APT61_RS03800 08508c0bb01137ec5607a31e5aa2bcb8 327 Gene3D G3DSA:3.30.70.270 161 313 8.5E-45 T 22-04-2016 APT61_RS03800 08508c0bb01137ec5607a31e5aa2bcb8 327 PANTHER PTHR10799:SF710 177 309 3.3E-21 T 22-04-2016 APT61_RS03800 08508c0bb01137ec5607a31e5aa2bcb8 327 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 50 155 7.3E-13 T 22-04-2016 IPR000014 PAS domain APT61_RS03800 08508c0bb01137ec5607a31e5aa2bcb8 327 SMART SM00091 29 98 1.5E-4 T 22-04-2016 IPR000014 PAS domain APT61_RS03800 08508c0bb01137ec5607a31e5aa2bcb8 327 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 155 312 2.8E-32 T 22-04-2016 IPR000160 GGDEF domain APT61_RS03800 08508c0bb01137ec5607a31e5aa2bcb8 327 SUPERFAMILY SSF55073 164 312 2.67E-37 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS03800 08508c0bb01137ec5607a31e5aa2bcb8 327 Pfam PF00990 Diguanylate cyclase, GGDEF domain 159 309 1.1E-35 T 22-04-2016 IPR000160 GGDEF domain APT61_RS03800 08508c0bb01137ec5607a31e5aa2bcb8 327 SMART SM00086 105 148 6.0E-4 T 22-04-2016 IPR001610 PAC motif APT61_RS03800 08508c0bb01137ec5607a31e5aa2bcb8 327 Pfam PF08447 PAS fold 55 142 9.3E-23 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 APT61_RS03800 08508c0bb01137ec5607a31e5aa2bcb8 327 Gene3D G3DSA:3.30.450.20 8 160 4.2E-35 T 22-04-2016 APT61_RS03800 08508c0bb01137ec5607a31e5aa2bcb8 327 SMART SM00267 148 314 3.6E-47 T 22-04-2016 IPR000160 GGDEF domain APT61_RS20710 92675f1bbff80bde92fcd48f4c27d88a 252 Gene3D G3DSA:3.60.15.10 1 251 2.5E-57 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS20710 92675f1bbff80bde92fcd48f4c27d88a 252 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 3 249 5.7E-120 T 22-04-2016 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55 APT61_RS20710 92675f1bbff80bde92fcd48f4c27d88a 252 SUPERFAMILY SSF56281 5 251 1.47E-31 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS20710 92675f1bbff80bde92fcd48f4c27d88a 252 Pfam PF12706 Beta-lactamase superfamily domain 73 223 3.7E-14 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS09290 1474f16732fdfcb8e18a84313f52eb57 464 Pfam PF07690 Major Facilitator Superfamily 45 422 2.1E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS09290 1474f16732fdfcb8e18a84313f52eb57 464 Gene3D G3DSA:1.20.1250.20 252 457 1.2E-12 T 22-04-2016 APT61_RS09290 1474f16732fdfcb8e18a84313f52eb57 464 PANTHER PTHR23515:SF1 7 377 0.0 T 22-04-2016 APT61_RS09290 1474f16732fdfcb8e18a84313f52eb57 464 PANTHER PTHR23515:SF1 397 463 0.0 T 22-04-2016 APT61_RS09290 1474f16732fdfcb8e18a84313f52eb57 464 TIGRFAM TIGR00886 2A0108: nitrite transporter 36 418 9.3E-112 T 22-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 APT61_RS09290 1474f16732fdfcb8e18a84313f52eb57 464 SUPERFAMILY SSF103473 20 462 2.09E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS09290 1474f16732fdfcb8e18a84313f52eb57 464 Gene3D G3DSA:1.20.1250.20 31 234 3.9E-12 T 22-04-2016 APT61_RS09290 1474f16732fdfcb8e18a84313f52eb57 464 PANTHER PTHR23515 7 377 0.0 T 22-04-2016 APT61_RS09290 1474f16732fdfcb8e18a84313f52eb57 464 PANTHER PTHR23515 397 463 0.0 T 22-04-2016 APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 PANTHER PTHR11262 1 105 1.2E-214 T 22-04-2016 APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 PANTHER PTHR11262 218 443 1.2E-214 T 22-04-2016 APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 SUPERFAMILY SSF52540 3 441 5.88E-93 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 Gene3D G3DSA:3.40.50.300 245 331 2.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 Gene3D G3DSA:3.40.50.300 3 110 2.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 SMART SM01086 335 434 1.3E-23 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 1.9E-6 T 22-04-2016 IPR019489 Clp ATPase, C-terminal APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 SMART SM00382 49 332 1.6E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 Gene3D G3DSA:1.10.8.60 335 443 3.0E-35 T 22-04-2016 APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.54 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 188 329 6.6E-43 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 Gene3D G3DSA:1.10.8.10 111 177 1.4E-33 T 22-04-2016 APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 Gene3D G3DSA:1.10.8.10 213 243 1.4E-33 T 22-04-2016 APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 9.7E-235 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 136 3.0E-7 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 PANTHER PTHR11262:SF3 1 105 1.2E-214 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APT61_RS00560 b94a6f1f61cef5587f59f9bd4158ba23 443 PANTHER PTHR11262:SF3 218 443 1.2E-214 T 22-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 APT61_RS12730 500b39f402e05fa79a8ba46b75550009 457 Pfam PF01554 MatE 17 177 9.1E-41 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APT61_RS12730 500b39f402e05fa79a8ba46b75550009 457 Pfam PF01554 MatE 244 405 3.1E-36 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APT61_RS12730 500b39f402e05fa79a8ba46b75550009 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 52.438 T 22-04-2016 IPR022913 Multidrug resistance protein MdtK APT61_RS12730 500b39f402e05fa79a8ba46b75550009 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 1.3E-120 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APT61_RS12730 500b39f402e05fa79a8ba46b75550009 457 PANTHER PTHR11206 2 446 2.2E-226 T 22-04-2016 APT61_RS12730 500b39f402e05fa79a8ba46b75550009 457 PANTHER PTHR11206:SF153 2 446 2.2E-226 T 22-04-2016 APT61_RS12730 500b39f402e05fa79a8ba46b75550009 457 PIRSF PIRSF006603 7 455 1.7E-57 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APT61_RS21480 588eef1f35d9842ce3dee08e0f066878 295 PANTHER PTHR18964:SF121 1 290 1.9E-92 T 22-04-2016 APT61_RS21480 588eef1f35d9842ce3dee08e0f066878 295 Gene3D G3DSA:3.30.420.40 3 101 7.8E-24 T 22-04-2016 APT61_RS21480 588eef1f35d9842ce3dee08e0f066878 295 SUPERFAMILY SSF53067 1 290 5.49E-59 T 22-04-2016 APT61_RS21480 588eef1f35d9842ce3dee08e0f066878 295 Pfam PF00480 ROK family 5 288 1.5E-50 T 22-04-2016 IPR000600 ROK family APT61_RS21480 588eef1f35d9842ce3dee08e0f066878 295 PANTHER PTHR18964 1 290 1.9E-92 T 22-04-2016 APT61_RS21480 588eef1f35d9842ce3dee08e0f066878 295 Gene3D G3DSA:3.30.420.40 105 290 4.7E-54 T 22-04-2016 APT61_RS19035 c74e35b28cf1a965cbdcdf266d527ad9 317 Pfam PF00923 Transaldolase 14 313 6.7E-103 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS19035 c74e35b28cf1a965cbdcdf266d527ad9 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 1.8E-165 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS19035 c74e35b28cf1a965cbdcdf266d527ad9 317 Hamap MF_00492 Transaldolase [tal]. 2 317 52.235 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS19035 c74e35b28cf1a965cbdcdf266d527ad9 317 PANTHER PTHR10683 1 317 2.5E-181 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS19035 c74e35b28cf1a965cbdcdf266d527ad9 317 SUPERFAMILY SSF51569 1 316 4.58E-119 T 22-04-2016 APT61_RS19035 c74e35b28cf1a965cbdcdf266d527ad9 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS19035 c74e35b28cf1a965cbdcdf266d527ad9 317 PANTHER PTHR10683:SF18 1 317 2.5E-181 T 22-04-2016 APT61_RS19035 c74e35b28cf1a965cbdcdf266d527ad9 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS19035 c74e35b28cf1a965cbdcdf266d527ad9 317 Gene3D G3DSA:3.20.20.70 3 315 4.3E-136 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS19650 9235fe58d31c8eeef6f9c41ac01c4dd7 256 PANTHER PTHR30363:SF1 6 256 1.2E-64 T 22-04-2016 APT61_RS19650 9235fe58d31c8eeef6f9c41ac01c4dd7 256 SUPERFAMILY SSF46785 9 64 3.44E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19650 9235fe58d31c8eeef6f9c41ac01c4dd7 256 Pfam PF00455 DeoR C terminal sensor domain 78 235 4.3E-43 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APT61_RS19650 9235fe58d31c8eeef6f9c41ac01c4dd7 256 Gene3D G3DSA:3.40.50.1360 79 215 2.5E-8 T 22-04-2016 APT61_RS19650 9235fe58d31c8eeef6f9c41ac01c4dd7 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 4.2E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS19650 9235fe58d31c8eeef6f9c41ac01c4dd7 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 4.2E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS19650 9235fe58d31c8eeef6f9c41ac01c4dd7 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APT61_RS19650 9235fe58d31c8eeef6f9c41ac01c4dd7 256 PANTHER PTHR30363 6 256 1.2E-64 T 22-04-2016 APT61_RS19650 9235fe58d31c8eeef6f9c41ac01c4dd7 256 SMART SM01134 76 237 2.5E-60 T 22-04-2016 APT61_RS19650 9235fe58d31c8eeef6f9c41ac01c4dd7 256 Gene3D G3DSA:1.10.10.10 9 54 7.2E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19650 9235fe58d31c8eeef6f9c41ac01c4dd7 256 SMART SM00420 11 63 1.3E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS19650 9235fe58d31c8eeef6f9c41ac01c4dd7 256 SUPERFAMILY SSF100950 77 235 1.05E-24 T 22-04-2016 APT61_RS19650 9235fe58d31c8eeef6f9c41ac01c4dd7 256 Pfam PF08220 DeoR-like helix-turn-helix domain 11 63 5.2E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS20650 88063048e2580118c5f57f3341df98d5 338 PANTHER PTHR30043 172 278 2.0E-181 T 22-04-2016 APT61_RS20650 88063048e2580118c5f57f3341df98d5 338 PANTHER PTHR30043 297 338 2.0E-181 T 22-04-2016 APT61_RS20650 88063048e2580118c5f57f3341df98d5 338 PANTHER PTHR30043 1 139 2.0E-181 T 22-04-2016 APT61_RS20650 88063048e2580118c5f57f3341df98d5 338 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 5 254 4.9E-92 T 22-04-2016 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 APT61_RS20650 88063048e2580118c5f57f3341df98d5 338 Gene3D G3DSA:3.40.190.10 119 222 2.9E-10 T 22-04-2016 APT61_RS20650 88063048e2580118c5f57f3341df98d5 338 PANTHER PTHR30043:SF4 172 278 2.0E-181 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 APT61_RS20650 88063048e2580118c5f57f3341df98d5 338 PANTHER PTHR30043:SF4 297 338 2.0E-181 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 APT61_RS20650 88063048e2580118c5f57f3341df98d5 338 PANTHER PTHR30043:SF4 1 139 2.0E-181 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 APT61_RS20650 88063048e2580118c5f57f3341df98d5 338 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 9 291 2.3E-111 T 22-04-2016 IPR017797 Phosphonate ABC transporter, periplasmic substrate-binding protein GO:0015604|GO:0015716|GO:0043190 APT61_RS20650 88063048e2580118c5f57f3341df98d5 338 SUPERFAMILY SSF53850 54 245 8.8E-43 T 22-04-2016 APT61_RS20650 88063048e2580118c5f57f3341df98d5 338 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 35 277 2.6E-69 T 22-04-2016 APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 53.833 T 22-04-2016 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 UniPathway: UPA00043 APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 Gene3D G3DSA:3.30.9.10 135 193 2.1E-14 T 22-04-2016 APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 Gene3D G3DSA:3.30.9.10 270 352 2.1E-14 T 22-04-2016 APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 SUPERFAMILY SSF54373 269 359 3.66E-16 T 22-04-2016 APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 Gene3D G3DSA:3.40.50.720 353 415 8.9E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 Gene3D G3DSA:3.40.50.720 194 269 8.9E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 Gene3D G3DSA:3.40.50.720 1 96 8.9E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 PANTHER PTHR13847:SF148 1 63 5.8E-256 T 22-04-2016 APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 PANTHER PTHR13847:SF148 107 431 5.8E-256 T 22-04-2016 APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 PANTHER PTHR13847 1 63 5.8E-256 T 22-04-2016 APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 PANTHER PTHR13847 107 431 5.8E-256 T 22-04-2016 APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 Pfam PF01266 FAD dependent oxidoreductase 2 397 1.2E-67 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 SUPERFAMILY SSF51905 107 271 1.68E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 SUPERFAMILY SSF51905 1 54 1.68E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS08920 36eed2313798a192a9749ef4c79ff4d7 432 SUPERFAMILY SSF51905 359 419 1.68E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS17955 b74978539dbb1ee7ad742f9c262cdc74 281 PANTHER PTHR23344 19 279 1.1E-94 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 APT61_RS17955 b74978539dbb1ee7ad742f9c262cdc74 281 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 24 274 1.9E-23 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 APT61_RS17955 b74978539dbb1ee7ad742f9c262cdc74 281 PANTHER PTHR23344:SF2 19 279 1.1E-94 T 22-04-2016 APT61_RS17955 b74978539dbb1ee7ad742f9c262cdc74 281 SUPERFAMILY SSF51695 19 280 9.42E-53 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APT61_RS17955 b74978539dbb1ee7ad742f9c262cdc74 281 Gene3D G3DSA:3.20.20.190 11 281 5.9E-56 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APT61_RS10690 a6c4c37fec4008f6b5b9afdb0320eb47 474 SUPERFAMILY SSF53720 2 472 1.44E-158 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS10690 a6c4c37fec4008f6b5b9afdb0320eb47 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APT61_RS10690 a6c4c37fec4008f6b5b9afdb0320eb47 474 PANTHER PTHR11699 1 474 0.0 T 22-04-2016 APT61_RS10690 a6c4c37fec4008f6b5b9afdb0320eb47 474 TIGRFAM TIGR03374 ABALDH: 1-pyrroline dehydrogenase 2 473 5.0E-296 T 22-04-2016 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 APT61_RS10690 a6c4c37fec4008f6b5b9afdb0320eb47 474 Pfam PF00171 Aldehyde dehydrogenase family 13 470 2.6E-166 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS10690 a6c4c37fec4008f6b5b9afdb0320eb47 474 Gene3D G3DSA:3.40.605.10 2 258 2.6E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS10690 a6c4c37fec4008f6b5b9afdb0320eb47 474 PANTHER PTHR11699:SF109 1 474 0.0 T 22-04-2016 IPR015657 Aminobutyraldehyde dehydrogenase KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 APT61_RS10690 a6c4c37fec4008f6b5b9afdb0320eb47 474 Hamap MF_01275 Gamma-aminobutyraldehyde dehydrogenase [prr]. 1 474 78.821 T 22-04-2016 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3|UniPathway: UPA00188 APT61_RS10690 a6c4c37fec4008f6b5b9afdb0320eb47 474 Gene3D G3DSA:3.40.309.10 259 437 1.6E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS05015 6f77d879bb8c193f67d9ebffb5ad3434 254 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 48 157 1.4E-23 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APT61_RS05015 6f77d879bb8c193f67d9ebffb5ad3434 254 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 131 147 - T 22-04-2016 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 APT61_RS05015 6f77d879bb8c193f67d9ebffb5ad3434 254 PANTHER PTHR11995 17 203 1.8E-107 T 22-04-2016 APT61_RS05015 6f77d879bb8c193f67d9ebffb5ad3434 254 PANTHER PTHR11995:SF20 17 203 1.8E-107 T 22-04-2016 APT61_RS05015 6f77d879bb8c193f67d9ebffb5ad3434 254 SUPERFAMILY SSF56770 36 168 4.06E-50 T 22-04-2016 APT61_RS05015 6f77d879bb8c193f67d9ebffb5ad3434 254 Gene3D G3DSA:3.40.50.700 37 160 1.7E-26 T 22-04-2016 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 APT61_RS11755 134b9a8f2c0289b9af55138750972fba 284 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 274 6.9E-97 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 APT61_RS11755 134b9a8f2c0289b9af55138750972fba 284 PANTHER PTHR38095:SF1 2 284 2.0E-164 T 22-04-2016 APT61_RS11755 134b9a8f2c0289b9af55138750972fba 284 PANTHER PTHR38095 2 284 2.0E-164 T 22-04-2016 APT61_RS19980 ed0653bf356388b917ead52497796e1c 377 Pfam PF01979 Amidohydrolase family 48 334 1.7E-6 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APT61_RS19980 ed0653bf356388b917ead52497796e1c 377 PANTHER PTHR11647 1 86 7.7E-14 T 22-04-2016 APT61_RS19980 ed0653bf356388b917ead52497796e1c 377 SUPERFAMILY SSF51556 51 316 8.36E-72 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS19980 ed0653bf356388b917ead52497796e1c 377 Gene3D G3DSA:3.20.20.140 59 315 3.3E-117 T 22-04-2016 APT61_RS19980 ed0653bf356388b917ead52497796e1c 377 PIRSF PIRSF039004 1 376 1.5E-133 T 22-04-2016 IPR020043 Amidohydrolase EF0837/AHA3915, putative KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- APT61_RS19980 ed0653bf356388b917ead52497796e1c 377 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 3 364 1.1E-174 T 22-04-2016 IPR020043 Amidohydrolase EF0837/AHA3915, putative KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- APT61_RS19980 ed0653bf356388b917ead52497796e1c 377 PANTHER PTHR11647:SF73 1 86 7.7E-14 T 22-04-2016 APT61_RS19980 ed0653bf356388b917ead52497796e1c 377 SUPERFAMILY SSF51338 1 58 2.23E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS19980 ed0653bf356388b917ead52497796e1c 377 Gene3D G3DSA:2.30.40.10 1 58 1.4E-11 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS14550 b69ca6da84677ee0e97604cf2abd311d 193 ProSitePatterns PS00622 LuxR-type HTH domain signature. 148 175 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS14550 b69ca6da84677ee0e97604cf2abd311d 193 SUPERFAMILY SSF52172 4 163 5.12E-29 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS14550 b69ca6da84677ee0e97604cf2abd311d 193 Pfam PF00072 Response regulator receiver domain 2 112 3.8E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS14550 b69ca6da84677ee0e97604cf2abd311d 193 PANTHER PTHR26402:SF599 1 190 7.3E-78 T 22-04-2016 APT61_RS14550 b69ca6da84677ee0e97604cf2abd311d 193 Pfam PF00196 Bacterial regulatory proteins, luxR family 133 185 3.3E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS14550 b69ca6da84677ee0e97604cf2abd311d 193 SMART SM00421 131 188 5.8E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS14550 b69ca6da84677ee0e97604cf2abd311d 193 SMART SM00448 1 111 5.9E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS14550 b69ca6da84677ee0e97604cf2abd311d 193 PANTHER PTHR26402 1 190 7.3E-78 T 22-04-2016 APT61_RS14550 b69ca6da84677ee0e97604cf2abd311d 193 Gene3D G3DSA:1.10.10.10 135 190 8.9E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14550 b69ca6da84677ee0e97604cf2abd311d 193 Gene3D G3DSA:3.40.50.2300 2 134 1.4E-27 T 22-04-2016 APT61_RS14550 b69ca6da84677ee0e97604cf2abd311d 193 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 176 2.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS14550 b69ca6da84677ee0e97604cf2abd311d 193 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 164 2.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS14550 b69ca6da84677ee0e97604cf2abd311d 193 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 134 148 2.3E-10 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS04950 c255291e22566bbe4fde1f227fbc04e8 400 Pfam PF00005 ABC transporter 45 192 7.8E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS04950 c255291e22566bbe4fde1f227fbc04e8 400 Pfam PF00571 CBS domain 347 393 3.6E-5 T 22-04-2016 IPR000644 CBS domain APT61_RS04950 c255291e22566bbe4fde1f227fbc04e8 400 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 394 7.1E-188 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 APT61_RS04950 c255291e22566bbe4fde1f227fbc04e8 400 PANTHER PTHR24220 6 16 1.1E-168 T 22-04-2016 APT61_RS04950 c255291e22566bbe4fde1f227fbc04e8 400 PANTHER PTHR24220 41 292 1.1E-168 T 22-04-2016 APT61_RS04950 c255291e22566bbe4fde1f227fbc04e8 400 SUPERFAMILY SSF54631 276 394 3.92E-11 T 22-04-2016 APT61_RS04950 c255291e22566bbe4fde1f227fbc04e8 400 Gene3D G3DSA:3.40.50.300 5 264 7.5E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04950 c255291e22566bbe4fde1f227fbc04e8 400 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS04950 c255291e22566bbe4fde1f227fbc04e8 400 Gene3D G3DSA:3.10.580.10 272 395 5.1E-21 T 22-04-2016 APT61_RS04950 c255291e22566bbe4fde1f227fbc04e8 400 SMART SM00382 53 242 8.7E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS04950 c255291e22566bbe4fde1f227fbc04e8 400 SUPERFAMILY SSF52540 43 270 6.29E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04950 c255291e22566bbe4fde1f227fbc04e8 400 PANTHER PTHR24220:SF374 6 16 1.1E-168 T 22-04-2016 APT61_RS04950 c255291e22566bbe4fde1f227fbc04e8 400 PANTHER PTHR24220:SF374 41 292 1.1E-168 T 22-04-2016 APT61_RS14380 b12a4d654d6f8237250505d062eb1536 212 Gene3D G3DSA:1.10.10.60 53 78 6.0E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS14380 b12a4d654d6f8237250505d062eb1536 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 2.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS14380 b12a4d654d6f8237250505d062eb1536 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 2.2E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS14380 b12a4d654d6f8237250505d062eb1536 212 Pfam PF08362 YcdC-like protein, C-terminal region 70 211 3.0E-58 T 22-04-2016 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 APT61_RS14380 b12a4d654d6f8237250505d062eb1536 212 PANTHER PTHR30055 6 174 1.8E-70 T 22-04-2016 APT61_RS14380 b12a4d654d6f8237250505d062eb1536 212 Gene3D G3DSA:1.10.357.10 79 212 1.2E-59 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS14380 b12a4d654d6f8237250505d062eb1536 212 SUPERFAMILY SSF48498 88 211 6.43E-42 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS14380 b12a4d654d6f8237250505d062eb1536 212 Gene3D G3DSA:1.10.10.60 11 52 1.9E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS14380 b12a4d654d6f8237250505d062eb1536 212 SUPERFAMILY SSF46689 17 91 4.74E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS14380 b12a4d654d6f8237250505d062eb1536 212 PANTHER PTHR30055:SF53 6 174 1.8E-70 T 22-04-2016 APT61_RS14380 b12a4d654d6f8237250505d062eb1536 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 2.4E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS10180 ba20a681764935d2582f433884dfa801 441 Gene3D G3DSA:1.20.1250.20 16 210 2.9E-21 T 22-04-2016 APT61_RS10180 ba20a681764935d2582f433884dfa801 441 Gene3D G3DSA:1.20.1250.20 241 429 1.7E-21 T 22-04-2016 APT61_RS10180 ba20a681764935d2582f433884dfa801 441 SUPERFAMILY SSF103473 14 429 2.75E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS10180 ba20a681764935d2582f433884dfa801 441 PANTHER PTHR23508:SF1 17 429 1.4E-154 T 22-04-2016 APT61_RS10180 ba20a681764935d2582f433884dfa801 441 Pfam PF00083 Sugar (and other) transporter 18 422 2.2E-25 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APT61_RS10180 ba20a681764935d2582f433884dfa801 441 PANTHER PTHR23508 17 429 1.4E-154 T 22-04-2016 APT61_RS10180 ba20a681764935d2582f433884dfa801 441 ProSitePatterns PS00217 Sugar transport proteins signature 2. 129 154 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS06425 18cea1baf390b90e05b9c2e25956acba 119 SUPERFAMILY SSF46955 2 55 2.84E-13 T 22-04-2016 IPR009061 Putative DNA-binding domain APT61_RS06425 18cea1baf390b90e05b9c2e25956acba 119 Gene3D G3DSA:1.10.10.10 3 66 6.4E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS06425 18cea1baf390b90e05b9c2e25956acba 119 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 6 117 1.0E-44 T 22-04-2016 IPR010749 Protein of unknown function DUF1323 APT61_RS06425 18cea1baf390b90e05b9c2e25956acba 119 Pfam PF07037 Putative transcription regulator (DUF1323) 6 118 2.0E-49 T 22-04-2016 IPR010749 Protein of unknown function DUF1323 APT61_RS03040 90e61c1fdbb78787829c830f80856be5 122 Pfam PF06476 Protein of unknown function (DUF1090) 11 115 8.8E-36 T 22-04-2016 IPR009468 Protein of unknown function DUF1090 APT61_RS18990 6a05bd1a99d0f747fc4ef0917fdade81 391 PANTHER PTHR30341 2 391 2.0E-195 T 22-04-2016 APT61_RS18990 6a05bd1a99d0f747fc4ef0917fdade81 391 PANTHER PTHR30341:SF0 2 391 2.0E-195 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APT61_RS18990 6a05bd1a99d0f747fc4ef0917fdade81 391 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 4 387 23.734 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APT61_RS18990 6a05bd1a99d0f747fc4ef0917fdade81 391 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 7 380 5.5E-182 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APT61_RS18990 6a05bd1a99d0f747fc4ef0917fdade81 391 Gene3D G3DSA:1.20.1530.10 4 384 1.4E-155 T 22-04-2016 IPR023171 Na/H antiporter domain APT61_RS18990 6a05bd1a99d0f747fc4ef0917fdade81 391 Pfam PF06965 Na+/H+ antiporter 1 6 380 2.1E-149 T 22-04-2016 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 APT61_RS14210 eb222648d38daaf8fc51b22e01bb094f 491 Hamap MF_01918 Cardiolipin synthase C [clsC]. 58 491 72.7 T 22-04-2016 IPR030871 Cardiolipin synthase C GO:0032049|GO:0090483 APT61_RS14210 eb222648d38daaf8fc51b22e01bb094f 491 SMART SM00155 143 170 4.2E-4 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APT61_RS14210 eb222648d38daaf8fc51b22e01bb094f 491 SMART SM00155 382 409 3.7E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APT61_RS14210 eb222648d38daaf8fc51b22e01bb094f 491 SUPERFAMILY SSF56024 259 454 3.81E-31 T 22-04-2016 APT61_RS14210 eb222648d38daaf8fc51b22e01bb094f 491 PANTHER PTHR21248 383 477 5.3E-213 T 22-04-2016 APT61_RS14210 eb222648d38daaf8fc51b22e01bb094f 491 PANTHER PTHR21248 17 366 5.3E-213 T 22-04-2016 APT61_RS14210 eb222648d38daaf8fc51b22e01bb094f 491 Pfam PF13091 PLD-like domain 293 433 8.5E-23 T 22-04-2016 IPR025202 Phospholipase D-like domain APT61_RS14210 eb222648d38daaf8fc51b22e01bb094f 491 Pfam PF13091 PLD-like domain 57 202 3.4E-15 T 22-04-2016 IPR025202 Phospholipase D-like domain APT61_RS14210 eb222648d38daaf8fc51b22e01bb094f 491 SUPERFAMILY SSF56024 24 207 3.14E-39 T 22-04-2016 APT61_RS14210 eb222648d38daaf8fc51b22e01bb094f 491 PANTHER PTHR21248:SF12 383 477 5.3E-213 T 22-04-2016 APT61_RS14210 eb222648d38daaf8fc51b22e01bb094f 491 PANTHER PTHR21248:SF12 17 366 5.3E-213 T 22-04-2016 APT61_RS14210 eb222648d38daaf8fc51b22e01bb094f 491 Gene3D G3DSA:3.30.870.10 236 455 2.8E-50 T 22-04-2016 APT61_RS14210 eb222648d38daaf8fc51b22e01bb094f 491 Gene3D G3DSA:3.30.870.10 25 212 3.5E-42 T 22-04-2016 APT61_RS03145 aa052dd62210e4a6d4225d9607403f84 468 Gene3D G3DSA:3.90.1150.10 349 461 5.7E-35 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS03145 aa052dd62210e4a6d4225d9607403f84 468 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 277 314 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS03145 aa052dd62210e4a6d4225d9607403f84 468 PANTHER PTHR11986 27 466 1.7E-239 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS03145 aa052dd62210e4a6d4225d9607403f84 468 Hamap MF_01276 Putrescine aminotransferase [patA]. 10 468 87.476 T 22-04-2016 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440|UniPathway: UPA00188 APT61_RS03145 aa052dd62210e4a6d4225d9607403f84 468 TIGRFAM TIGR03372 putres_am_tran: putrescine aminotransferase 17 458 3.5E-288 T 22-04-2016 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440|UniPathway: UPA00188 APT61_RS03145 aa052dd62210e4a6d4225d9607403f84 468 PANTHER PTHR11986:SF75 27 466 1.7E-239 T 22-04-2016 APT61_RS03145 aa052dd62210e4a6d4225d9607403f84 468 Pfam PF00202 Aminotransferase class-III 83 458 3.5E-105 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS03145 aa052dd62210e4a6d4225d9607403f84 468 SUPERFAMILY SSF53383 79 459 1.65E-120 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS03145 aa052dd62210e4a6d4225d9607403f84 468 Gene3D G3DSA:3.40.640.10 109 348 2.3E-92 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS05390 16ed06429ad3cfe584cc64428e61c1b4 318 Gene3D G3DSA:1.10.10.10 7 91 8.1E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05390 16ed06429ad3cfe584cc64428e61c1b4 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 9.7E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS05390 16ed06429ad3cfe584cc64428e61c1b4 318 PANTHER PTHR30537 1 318 2.8E-92 T 22-04-2016 APT61_RS05390 16ed06429ad3cfe584cc64428e61c1b4 318 PANTHER PTHR30537:SF5 1 318 2.8E-92 T 22-04-2016 APT61_RS05390 16ed06429ad3cfe584cc64428e61c1b4 318 SUPERFAMILY SSF53850 94 306 1.09E-38 T 22-04-2016 APT61_RS05390 16ed06429ad3cfe584cc64428e61c1b4 318 Gene3D G3DSA:3.40.190.10 183 266 9.6E-25 T 22-04-2016 APT61_RS05390 16ed06429ad3cfe584cc64428e61c1b4 318 Gene3D G3DSA:3.40.190.10 97 182 5.8E-20 T 22-04-2016 APT61_RS05390 16ed06429ad3cfe584cc64428e61c1b4 318 SUPERFAMILY SSF46785 6 89 3.27E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05390 16ed06429ad3cfe584cc64428e61c1b4 318 Pfam PF03466 LysR substrate binding domain 93 301 7.1E-38 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS18250 9725bd792c436e190ae93f656aa6809b 241 SUPERFAMILY SSF53633 7 240 8.12E-72 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS18250 9725bd792c436e190ae93f656aa6809b 241 PANTHER PTHR21499 4 241 1.4E-108 T 22-04-2016 APT61_RS18250 9725bd792c436e190ae93f656aa6809b 241 PANTHER PTHR21499:SF23 4 241 1.4E-108 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APT61_RS18250 9725bd792c436e190ae93f656aa6809b 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 1.8E-103 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APT61_RS18250 9725bd792c436e190ae93f656aa6809b 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.352 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APT61_RS18250 9725bd792c436e190ae93f656aa6809b 241 Pfam PF00696 Amino acid kinase family 10 219 2.4E-27 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS18250 9725bd792c436e190ae93f656aa6809b 241 Gene3D G3DSA:3.40.1160.10 3 240 4.1E-85 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS18250 9725bd792c436e190ae93f656aa6809b 241 PIRSF PIRSF005650 4 241 5.3E-89 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 APT61_RS07920 3cc37ab7f29660084327220774a50f39 594 Pfam PF16189 Creatinase/Prolidase N-terminal domain 143 300 7.0E-32 T 22-04-2016 APT61_RS07920 3cc37ab7f29660084327220774a50f39 594 Pfam PF01321 Creatinase/Prolidase N-terminal domain 7 130 3.3E-17 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 APT61_RS07920 3cc37ab7f29660084327220774a50f39 594 SUPERFAMILY SSF53092 8 130 8.72E-13 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal APT61_RS07920 3cc37ab7f29660084327220774a50f39 594 SUPERFAMILY SSF55920 297 552 9.94E-50 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS07920 3cc37ab7f29660084327220774a50f39 594 Gene3D G3DSA:3.40.350.10 7 131 1.8E-19 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APT61_RS07920 3cc37ab7f29660084327220774a50f39 594 Pfam PF16188 C-terminal region of peptidase_M24 527 585 2.2E-20 T 22-04-2016 IPR032416 Peptidase M24, C-terminal domain APT61_RS07920 3cc37ab7f29660084327220774a50f39 594 PANTHER PTHR10804 7 175 4.0E-149 T 22-04-2016 APT61_RS07920 3cc37ab7f29660084327220774a50f39 594 PANTHER PTHR10804 276 584 4.0E-149 T 22-04-2016 APT61_RS07920 3cc37ab7f29660084327220774a50f39 594 Pfam PF00557 Metallopeptidase family M24 304 521 7.6E-38 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS07920 3cc37ab7f29660084327220774a50f39 594 Gene3D G3DSA:3.90.230.10 295 553 6.0E-50 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS07920 3cc37ab7f29660084327220774a50f39 594 PANTHER PTHR10804:SF105 7 175 4.0E-149 T 22-04-2016 APT61_RS07920 3cc37ab7f29660084327220774a50f39 594 PANTHER PTHR10804:SF105 276 584 4.0E-149 T 22-04-2016 APT61_RS07920 3cc37ab7f29660084327220774a50f39 594 Gene3D G3DSA:3.40.350.10 153 200 2.9E-4 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APT61_RS13030 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Pfam PF01632 Ribosomal protein L35 2 60 2.3E-22 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS13030 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.1E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APT61_RS13030 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.1E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APT61_RS13030 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.1E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APT61_RS13030 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.841 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APT61_RS13030 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 SUPERFAMILY SSF143034 2 64 3.01E-22 T 22-04-2016 APT61_RS13030 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.2E-26 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 APT61_RS13030 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 22-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS13030 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PANTHER PTHR33343 1 65 1.6E-28 T 22-04-2016 APT61_RS03575 6fd6836a549c407cf03dff4ac177c60a 191 SUPERFAMILY SSF49401 32 191 5.97E-34 T 22-04-2016 IPR008966 Adhesion domain APT61_RS03575 6fd6836a549c407cf03dff4ac177c60a 191 Gene3D G3DSA:2.60.40.1090 31 191 2.8E-36 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APT61_RS03575 6fd6836a549c407cf03dff4ac177c60a 191 Pfam PF00419 Fimbrial protein 33 191 6.6E-18 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APT61_RS03575 6fd6836a549c407cf03dff4ac177c60a 191 PANTHER PTHR33420:SF11 1 191 5.4E-50 T 22-04-2016 APT61_RS03575 6fd6836a549c407cf03dff4ac177c60a 191 PANTHER PTHR33420 1 191 5.4E-50 T 22-04-2016 APT61_RS07210 44f31c949027e62aaf0299404c5561f4 285 Gene3D G3DSA:3.20.20.150 1 277 1.6E-120 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS07210 44f31c949027e62aaf0299404c5561f4 285 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 APT61_RS07210 44f31c949027e62aaf0299404c5561f4 285 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 276 5.5E-116 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 APT61_RS07210 44f31c949027e62aaf0299404c5561f4 285 SUPERFAMILY SSF51658 1 277 6.02E-103 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS07210 44f31c949027e62aaf0299404c5561f4 285 SMART SM00518 3 279 2.5E-141 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 APT61_RS07210 44f31c949027e62aaf0299404c5561f4 285 PANTHER PTHR21445:SF0 1 282 2.9E-158 T 22-04-2016 APT61_RS07210 44f31c949027e62aaf0299404c5561f4 285 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 APT61_RS07210 44f31c949027e62aaf0299404c5561f4 285 PANTHER PTHR21445 1 282 2.9E-158 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 APT61_RS07210 44f31c949027e62aaf0299404c5561f4 285 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 45.088 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 APT61_RS07210 44f31c949027e62aaf0299404c5561f4 285 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 APT61_RS07210 44f31c949027e62aaf0299404c5561f4 285 Pfam PF01261 Xylose isomerase-like TIM barrel 21 239 8.6E-42 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS04290 e1e191cf8b99a801cc3460dbc70e58f1 227 PANTHER PTHR38105 1 227 2.7E-74 T 22-04-2016 APT61_RS04290 e1e191cf8b99a801cc3460dbc70e58f1 227 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 15 227 1.6E-65 T 22-04-2016 IPR009331 Oligogalacturonate-specific porin APT61_RS04290 e1e191cf8b99a801cc3460dbc70e58f1 227 PANTHER PTHR38105:SF1 1 227 2.7E-74 T 22-04-2016 APT61_RS04290 e1e191cf8b99a801cc3460dbc70e58f1 227 Gene3D G3DSA:2.40.230.30 22 227 1.6E-67 T 22-04-2016 APT61_RS04290 e1e191cf8b99a801cc3460dbc70e58f1 227 SUPERFAMILY SSF56935 40 227 5.8E-15 T 22-04-2016 APT61_RS18360 1c644d048405d3d235dde6c561b12da1 176 PANTHER PTHR35561:SF1 1 176 2.1E-52 T 22-04-2016 APT61_RS18360 1c644d048405d3d235dde6c561b12da1 176 Gene3D G3DSA:3.90.1140.10 6 175 6.4E-51 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase APT61_RS18360 1c644d048405d3d235dde6c561b12da1 176 Pfam PF02834 LigT like Phosphoesterase 92 164 2.0E-8 T 22-04-2016 IPR014051 Phosphoesterase, HXTX APT61_RS18360 1c644d048405d3d235dde6c561b12da1 176 Pfam PF02834 LigT like Phosphoesterase 11 89 1.6E-13 T 22-04-2016 IPR014051 Phosphoesterase, HXTX APT61_RS18360 1c644d048405d3d235dde6c561b12da1 176 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 174 1.1E-41 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 APT61_RS18360 1c644d048405d3d235dde6c561b12da1 176 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 174 22.131 T 22-04-2016 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 APT61_RS18360 1c644d048405d3d235dde6c561b12da1 176 PANTHER PTHR35561 1 176 2.1E-52 T 22-04-2016 APT61_RS18360 1c644d048405d3d235dde6c561b12da1 176 SUPERFAMILY SSF55144 5 174 1.15E-45 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase APT61_RS10835 b8c648435deca4e65a5738a5467505f3 438 Gene3D G3DSA:3.20.20.30 346 432 1.4E-130 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS10835 b8c648435deca4e65a5738a5467505f3 438 Gene3D G3DSA:3.20.20.30 1 305 1.4E-130 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS10835 b8c648435deca4e65a5738a5467505f3 438 PANTHER PTHR30011 1 435 3.0E-229 T 22-04-2016 APT61_RS10835 b8c648435deca4e65a5738a5467505f3 438 PANTHER PTHR30011:SF22 1 435 3.0E-229 T 22-04-2016 APT61_RS10835 b8c648435deca4e65a5738a5467505f3 438 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 9 424 2.0E-164 T 22-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 APT61_RS10835 b8c648435deca4e65a5738a5467505f3 438 PIRSF PIRSF000337 3 438 9.0E-143 T 22-04-2016 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 APT61_RS10835 b8c648435deca4e65a5738a5467505f3 438 SUPERFAMILY SSF51679 4 431 5.5E-131 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS10835 b8c648435deca4e65a5738a5467505f3 438 Pfam PF00296 Luciferase-like monooxygenase 20 379 6.6E-63 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 SMART SM00283 281 528 3.9E-90 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 306 328 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 Gene3D G3DSA:1.20.120.30 61 164 5.3E-9 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 SMART SM00304 228 280 1.4E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 PANTHER PTHR32089:SF35 19 531 1.3E-286 T 22-04-2016 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 Pfam PF02203 Tar ligand binding domain homologue 15 188 5.5E-35 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 SUPERFAMILY SSF47170 34 179 3.01E-25 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 Gene3D G3DSA:1.10.287.950 296 500 1.7E-61 T 22-04-2016 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 SMART SM00319 51 190 3.3E-29 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 SUPERFAMILY SSF58104 248 529 1.44E-73 T 22-04-2016 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 406 6.1E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 6.1E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 302 331 6.1E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 19 44 6.1E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 6.1E-61 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 Pfam PF00672 HAMP domain 209 276 3.2E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 527 1.2E-64 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS10505 6bd336f00e4d8c0a45973d1232699d54 563 PANTHER PTHR32089 19 531 1.3E-286 T 22-04-2016 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 Gene3D G3DSA:3.30.70.240 400 477 4.2E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 4.1E-11 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 Gene3D G3DSA:3.30.70.870 304 399 1.9E-37 T 22-04-2016 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 9.8E-292 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 3.8E-25 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 Pfam PF00679 Elongation factor G C-terminus 397 476 1.4E-21 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 Gene3D G3DSA:2.40.50.250 483 577 2.8E-40 T 22-04-2016 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 Gene3D G3DSA:2.40.30.10 206 303 7.6E-25 T 22-04-2016 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 Gene3D G3DSA:3.40.50.300 3 205 4.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 PANTHER PTHR23115:SF14 3 602 1.2E-300 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 SUPERFAMILY SSF54980 302 387 6.12E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 PANTHER PTHR23115 3 602 1.2E-300 T 22-04-2016 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 1.5E-57 T 22-04-2016 APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 SUPERFAMILY SSF52540 3 207 6.9E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 SUPERFAMILY SSF50447 151 299 2.08E-32 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APT61_RS00185 248445a87aa6937f46940abcb79833b1 607 SUPERFAMILY SSF54980 398 512 1.34E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APT61_RS02685 6c1fe77dbe27bba34cd26382821142dc 184 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 2 153 3.1E-55 T 22-04-2016 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 APT61_RS02685 6c1fe77dbe27bba34cd26382821142dc 184 Pfam PF02470 MlaD protein 39 116 4.6E-21 T 22-04-2016 IPR003399 Mce/MlaD APT61_RS02685 6c1fe77dbe27bba34cd26382821142dc 184 PANTHER PTHR33371 1 165 5.9E-48 T 22-04-2016 APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 349 1.2E-141 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 Gene3D G3DSA:2.10.230.10 140 209 5.4E-26 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 PRINTS PR00625 DnaJ domain signature 7 25 3.0E-33 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 PRINTS PR00625 DnaJ domain signature 62 81 3.0E-33 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 PRINTS PR00625 DnaJ domain signature 25 40 3.0E-33 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 PRINTS PR00625 DnaJ domain signature 42 62 3.0E-33 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 Pfam PF00226 DnaJ domain 5 67 3.3E-28 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 Gene3D G3DSA:1.10.287.110 1 104 1.3E-37 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 Gene3D G3DSA:2.60.260.20 210 253 2.7E-22 T 22-04-2016 APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 Gene3D G3DSA:2.60.260.20 105 139 2.7E-22 T 22-04-2016 APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 22-04-2016 IPR018253 DnaJ domain, conserved site APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 PANTHER PTHR24078 1 358 1.5E-173 T 22-04-2016 APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 Pfam PF01556 DnaJ C terminal domain 120 332 3.7E-45 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 SMART SM00271 4 62 1.3E-30 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 42.504 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 SUPERFAMILY SSF46565 1 108 5.63E-36 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 Gene3D G3DSA:2.60.260.20 255 332 1.3E-22 T 22-04-2016 APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 PANTHER PTHR24078:SF231 1 358 1.5E-173 T 22-04-2016 APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 SUPERFAMILY SSF49493 113 168 6.41E-22 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 SUPERFAMILY SSF49493 212 266 6.41E-22 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 SUPERFAMILY SSF57938 133 210 1.7E-23 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 SUPERFAMILY SSF49493 258 343 9.29E-21 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 APT61_RS18995 2cd082a61702f338db7ad50d1fde53b7 378 Pfam PF00684 DnaJ central domain 146 206 4.4E-15 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APT61_RS19780 c4a1eb4255a4ac0195ff7f5b4c6a5ba6 110 Gene3D G3DSA:2.10.260.10 46 98 9.7E-4 T 22-04-2016 APT61_RS19780 c4a1eb4255a4ac0195ff7f5b4c6a5ba6 110 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 21 70 3.0E-13 T 22-04-2016 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 APT61_RS18550 66c8ad2b9a51196f5da286c4940e4805 203 Gene3D G3DSA:3.40.50.300 1 195 1.7E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18550 66c8ad2b9a51196f5da286c4940e4805 203 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 190 1.1E-66 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APT61_RS18550 66c8ad2b9a51196f5da286c4940e4805 203 Pfam PF01121 Dephospho-CoA kinase 3 177 3.4E-74 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APT61_RS18550 66c8ad2b9a51196f5da286c4940e4805 203 SUPERFAMILY SSF52540 1 192 2.09E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18550 66c8ad2b9a51196f5da286c4940e4805 203 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 27.742 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 APT61_RS18550 66c8ad2b9a51196f5da286c4940e4805 203 PANTHER PTHR10695 3 194 1.2E-80 T 22-04-2016 APT61_RS13870 afe72c32f52c2b7cbb8633020a3f3bff 399 PANTHER PTHR30489 1 399 1.8E-243 T 22-04-2016 APT61_RS13870 afe72c32f52c2b7cbb8633020a3f3bff 399 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 399 6.7E-145 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 APT61_RS13870 afe72c32f52c2b7cbb8633020a3f3bff 399 Pfam PF12704 MacB-like periplasmic core domain 27 208 9.6E-14 T 22-04-2016 IPR025857 MacB-like periplasmic core domain APT61_RS13870 afe72c32f52c2b7cbb8633020a3f3bff 399 PANTHER PTHR30489:SF8 1 399 1.8E-243 T 22-04-2016 APT61_RS13870 afe72c32f52c2b7cbb8633020a3f3bff 399 Pfam PF02687 FtsX-like permease family 270 392 3.3E-17 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APT61_RS05600 0a6f72d7a81887c5ff6d9820e11cd695 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS05600 0a6f72d7a81887c5ff6d9820e11cd695 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 3.1E-53 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS05600 0a6f72d7a81887c5ff6d9820e11cd695 115 SUPERFAMILY SSF50104 2 114 1.0E-47 T 22-04-2016 IPR008991 Translation protein SH3-like domain APT61_RS05600 0a6f72d7a81887c5ff6d9820e11cd695 115 Pfam PF01245 Ribosomal protein L19 3 113 7.5E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS05600 0a6f72d7a81887c5ff6d9820e11cd695 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS05600 0a6f72d7a81887c5ff6d9820e11cd695 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS05600 0a6f72d7a81887c5ff6d9820e11cd695 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS05600 0a6f72d7a81887c5ff6d9820e11cd695 115 PANTHER PTHR15680 1 114 1.1E-58 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS05600 0a6f72d7a81887c5ff6d9820e11cd695 115 PIRSF PIRSF002191 1 115 1.9E-50 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS05600 0a6f72d7a81887c5ff6d9820e11cd695 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.413 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS00325 1abbc19f2bf02540006be54804baacc2 563 PIRSF PIRSF029745 2 563 1.6E-164 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 APT61_RS00325 1abbc19f2bf02540006be54804baacc2 563 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 175 492 1.8E-29 T 22-04-2016 IPR005565 Haemolysin activator HlyB APT61_RS00325 1abbc19f2bf02540006be54804baacc2 563 Gene3D G3DSA:2.40.160.50 185 563 2.2E-126 T 22-04-2016 APT61_RS00325 1abbc19f2bf02540006be54804baacc2 563 Gene3D G3DSA:3.10.20.310 73 154 1.4E-18 T 22-04-2016 APT61_RS00325 1abbc19f2bf02540006be54804baacc2 563 PANTHER PTHR34597 1 563 1.3E-213 T 22-04-2016 APT61_RS00325 1abbc19f2bf02540006be54804baacc2 563 Pfam PF08479 POTRA domain, ShlB-type 78 154 6.6E-22 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type APT61_RS00325 1abbc19f2bf02540006be54804baacc2 563 PANTHER PTHR34597:SF2 1 563 1.3E-213 T 22-04-2016 APT61_RS10550 17fbf4208caf17e9f71d63414b2e2647 551 PIRSF PIRSF006281 1 538 9.0E-197 T 22-04-2016 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D UniPathway: UPA00637 APT61_RS10550 17fbf4208caf17e9f71d63414b2e2647 551 Gene3D G3DSA:2.60.40.10 424 545 1.2E-29 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS10550 17fbf4208caf17e9f71d63414b2e2647 551 SUPERFAMILY SSF74650 45 422 1.38E-144 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APT61_RS10550 17fbf4208caf17e9f71d63414b2e2647 551 PANTHER PTHR30504:SF3 1 551 0.0 T 22-04-2016 APT61_RS10550 17fbf4208caf17e9f71d63414b2e2647 551 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 544 58.879 T 22-04-2016 IPR023724 Glucan biosynthesis, MdoD UniPathway: UPA00637 APT61_RS10550 17fbf4208caf17e9f71d63414b2e2647 551 Gene3D G3DSA:2.70.98.10 44 423 5.2E-159 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APT61_RS10550 17fbf4208caf17e9f71d63414b2e2647 551 SUPERFAMILY SSF81296 422 537 1.15E-24 T 22-04-2016 IPR014756 Immunoglobulin E-set APT61_RS10550 17fbf4208caf17e9f71d63414b2e2647 551 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 45 534 8.3E-178 T 22-04-2016 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 UniPathway: UPA00637 APT61_RS10550 17fbf4208caf17e9f71d63414b2e2647 551 PANTHER PTHR30504 1 551 0.0 T 22-04-2016 APT61_RS20235 11cd9a0cf522d466c5a66027da5db188 228 PANTHER PTHR22789:SF2 1 227 3.5E-133 T 22-04-2016 APT61_RS20235 11cd9a0cf522d466c5a66027da5db188 228 SMART SM01007 6 194 1.2E-68 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS20235 11cd9a0cf522d466c5a66027da5db188 228 PANTHER PTHR22789 1 227 3.5E-133 T 22-04-2016 APT61_RS20235 11cd9a0cf522d466c5a66027da5db188 228 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 193 3.4E-47 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS20235 11cd9a0cf522d466c5a66027da5db188 228 Hamap MF_01952 L-ribulose-5-phosphate 4-epimerase UlaF [ulaF]. 1 228 66.74 T 22-04-2016 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF GO:0008742 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961|UniPathway: UPA00263 APT61_RS20235 11cd9a0cf522d466c5a66027da5db188 228 Gene3D G3DSA:3.40.225.10 2 227 5.1E-73 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS20235 11cd9a0cf522d466c5a66027da5db188 228 SUPERFAMILY SSF53639 2 219 7.85E-70 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS14310 9cd4e9e4e5b7d184846533d8499831fd 225 Gene3D G3DSA:3.40.50.850 14 211 1.5E-43 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS14310 9cd4e9e4e5b7d184846533d8499831fd 225 Pfam PF00857 Isochorismatase family 20 172 1.2E-20 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS14310 9cd4e9e4e5b7d184846533d8499831fd 225 PANTHER PTHR14119:SF10 14 209 1.9E-143 T 22-04-2016 APT61_RS14310 9cd4e9e4e5b7d184846533d8499831fd 225 PANTHER PTHR14119 14 209 1.9E-143 T 22-04-2016 APT61_RS14310 9cd4e9e4e5b7d184846533d8499831fd 225 SUPERFAMILY SSF52499 13 208 9.68E-46 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS21135 d9c1315ccbf178d39b252db95de1c424 354 Gene3D G3DSA:3.20.20.210 2 351 7.0E-155 T 22-04-2016 APT61_RS21135 d9c1315ccbf178d39b252db95de1c424 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 1.5E-139 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS21135 d9c1315ccbf178d39b252db95de1c424 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS21135 d9c1315ccbf178d39b252db95de1c424 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS21135 d9c1315ccbf178d39b252db95de1c424 354 PANTHER PTHR21091 1 351 7.5E-163 T 22-04-2016 APT61_RS21135 d9c1315ccbf178d39b252db95de1c424 354 SUPERFAMILY SSF51726 1 351 1.57E-121 T 22-04-2016 APT61_RS21135 d9c1315ccbf178d39b252db95de1c424 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 3.5E-136 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS21135 d9c1315ccbf178d39b252db95de1c424 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.586 T 22-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS21135 d9c1315ccbf178d39b252db95de1c424 354 PANTHER PTHR21091:SF2 1 351 7.5E-163 T 22-04-2016 APT61_RS15885 e54b1480c649fa604b1f642ce6d39823 312 Pfam PF00491 Arginase family 44 307 3.3E-52 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 APT61_RS15885 e54b1480c649fa604b1f642ce6d39823 312 PANTHER PTHR11358 7 312 4.2E-107 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 APT61_RS15885 e54b1480c649fa604b1f642ce6d39823 312 SUPERFAMILY SSF52768 11 311 2.7E-71 T 22-04-2016 APT61_RS15885 e54b1480c649fa604b1f642ce6d39823 312 TIGRFAM TIGR01227 hutG: formimidoylglutamase 12 308 1.2E-82 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 APT61_RS15885 e54b1480c649fa604b1f642ce6d39823 312 Gene3D G3DSA:3.40.800.10 5 311 3.6E-91 T 22-04-2016 IPR023696 Ureohydrolase domain APT61_RS15885 e54b1480c649fa604b1f642ce6d39823 312 PIRSF PIRSF036979 19 312 5.7E-26 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 APT61_RS15885 e54b1480c649fa604b1f642ce6d39823 312 PANTHER PTHR11358:SF35 7 312 4.2E-107 T 22-04-2016 APT61_RS15885 e54b1480c649fa604b1f642ce6d39823 312 Hamap MF_00737 Formimidoylglutamase [hutG]. 7 309 40.425 T 22-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 APT61_RS15885 e54b1480c649fa604b1f642ce6d39823 312 ProSitePatterns PS01053 Arginase family signature. 238 259 - T 22-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 APT61_RS21445 1952a5c21e5a6e6a5c0be0540b782a1d 156 PANTHER PTHR11938:SF111 1 143 2.5E-64 T 22-04-2016 APT61_RS21445 1952a5c21e5a6e6a5c0be0540b782a1d 156 Gene3D G3DSA:3.30.70.20 4 62 7.4E-10 T 22-04-2016 APT61_RS21445 1952a5c21e5a6e6a5c0be0540b782a1d 156 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS21445 1952a5c21e5a6e6a5c0be0540b782a1d 156 Gene3D G3DSA:3.30.70.20 98 147 4.6E-17 T 22-04-2016 APT61_RS21445 1952a5c21e5a6e6a5c0be0540b782a1d 156 PANTHER PTHR11938 1 143 2.5E-64 T 22-04-2016 APT61_RS21445 1952a5c21e5a6e6a5c0be0540b782a1d 156 SUPERFAMILY SSF54862 2 149 9.84E-38 T 22-04-2016 APT61_RS21445 1952a5c21e5a6e6a5c0be0540b782a1d 156 Pfam PF13247 4Fe-4S dicluster domain 54 141 5.8E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS21445 1952a5c21e5a6e6a5c0be0540b782a1d 156 Gene3D G3DSA:3.30.70.20 63 97 2.2E-15 T 22-04-2016 APT61_RS21445 1952a5c21e5a6e6a5c0be0540b782a1d 156 Pfam PF12800 4Fe-4S binding domain 10 22 0.22 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS13785 4a976c581cd74e3296f4e5245aee0ad7 217 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 76 90 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APT61_RS13785 4a976c581cd74e3296f4e5245aee0ad7 217 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 45 216 5.0E-59 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APT61_RS13785 4a976c581cd74e3296f4e5245aee0ad7 217 PANTHER PTHR21600:SF23 160 217 6.5E-97 T 22-04-2016 APT61_RS13785 4a976c581cd74e3296f4e5245aee0ad7 217 PANTHER PTHR21600:SF23 5 142 6.5E-97 T 22-04-2016 APT61_RS13785 4a976c581cd74e3296f4e5245aee0ad7 217 PANTHER PTHR21600 160 217 6.5E-97 T 22-04-2016 APT61_RS13785 4a976c581cd74e3296f4e5245aee0ad7 217 PANTHER PTHR21600 5 142 6.5E-97 T 22-04-2016 APT61_RS13785 4a976c581cd74e3296f4e5245aee0ad7 217 SUPERFAMILY SSF55120 37 216 2.08E-43 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS13785 4a976c581cd74e3296f4e5245aee0ad7 217 Pfam PF00849 RNA pseudouridylate synthase 41 186 1.3E-13 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS00490 30568f29c9ae3b0b259512ed93441fde 254 PIRSF PIRSF001273 1 251 1.2E-97 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 APT61_RS00490 30568f29c9ae3b0b259512ed93441fde 254 Gene3D G3DSA:3.30.428.30 27 248 7.6E-100 T 22-04-2016 APT61_RS00490 30568f29c9ae3b0b259512ed93441fde 254 TIGRFAM TIGR00672 cdh: CDP-diacylglycerol diphosphatase 1 249 5.5E-126 T 22-04-2016 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 APT61_RS00490 30568f29c9ae3b0b259512ed93441fde 254 SUPERFAMILY SSF54197 29 247 5.29E-88 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 APT61_RS00490 30568f29c9ae3b0b259512ed93441fde 254 Hamap MF_00319 CDP-diacylglycerol pyrophosphatase [cdh]. 1 249 47.86 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 APT61_RS00490 30568f29c9ae3b0b259512ed93441fde 254 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 29 247 1.7E-89 T 22-04-2016 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26|UniPathway: UPA00609 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 Gene3D G3DSA:3.40.190.10 27 150 1.1E-12 T 22-04-2016 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 Pfam PF13416 Bacterial extracellular solute-binding protein 46 335 8.9E-36 T 22-04-2016 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 PANTHER PTHR30222 12 370 6.5E-176 T 22-04-2016 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 PANTHER PTHR30222:SF11 12 370 6.5E-176 T 22-04-2016 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 SUPERFAMILY SSF53850 29 369 2.84E-105 T 22-04-2016 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 PIRSF PIRSF019574 1 370 3.2E-145 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 Gene3D G3DSA:3.40.190.10 151 319 1.5E-76 T 22-04-2016 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 2.1E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 2.1E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 269 288 2.1E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 2.1E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 219 238 2.1E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 181 200 2.1E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 2.1E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 314 340 2.1E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 2.1E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS15325 98650abf31d03eaa100a0f835228cadb 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 2.1E-76 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS14300 e582b0666114569eb9c08aac8d6b0608 301 SUPERFAMILY SSF46785 3 87 1.9E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14300 e582b0666114569eb9c08aac8d6b0608 301 PANTHER PTHR30537 1 301 6.2E-190 T 22-04-2016 APT61_RS14300 e582b0666114569eb9c08aac8d6b0608 301 SUPERFAMILY SSF53850 89 299 3.44E-43 T 22-04-2016 APT61_RS14300 e582b0666114569eb9c08aac8d6b0608 301 Gene3D G3DSA:1.10.10.10 3 83 8.6E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14300 e582b0666114569eb9c08aac8d6b0608 301 Gene3D G3DSA:3.40.190.10 180 263 2.2E-19 T 22-04-2016 APT61_RS14300 e582b0666114569eb9c08aac8d6b0608 301 Gene3D G3DSA:3.40.190.10 92 179 3.9E-20 T 22-04-2016 APT61_RS14300 e582b0666114569eb9c08aac8d6b0608 301 PANTHER PTHR30537:SF29 1 301 6.2E-190 T 22-04-2016 APT61_RS14300 e582b0666114569eb9c08aac8d6b0608 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.5E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS14300 e582b0666114569eb9c08aac8d6b0608 301 Pfam PF03466 LysR substrate binding domain 88 294 1.5E-42 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS05420 f1429dc67e25bf78d9a7bcf6b5045583 466 PANTHER PTHR30026 9 465 2.3E-99 T 22-04-2016 APT61_RS05420 f1429dc67e25bf78d9a7bcf6b5045583 466 Pfam PF02321 Outer membrane efflux protein 61 240 8.2E-28 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APT61_RS05420 f1429dc67e25bf78d9a7bcf6b5045583 466 Pfam PF02321 Outer membrane efflux protein 270 438 6.1E-21 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APT61_RS05420 f1429dc67e25bf78d9a7bcf6b5045583 466 PANTHER PTHR30026:SF3 9 465 2.3E-99 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 APT61_RS05420 f1429dc67e25bf78d9a7bcf6b5045583 466 Gene3D G3DSA:1.20.1600.10 51 446 4.3E-63 T 22-04-2016 APT61_RS05420 f1429dc67e25bf78d9a7bcf6b5045583 466 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 57 459 9.3E-108 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 APT61_RS05420 f1429dc67e25bf78d9a7bcf6b5045583 466 SUPERFAMILY SSF56954 3 448 7.72E-70 T 22-04-2016 APT61_RS15870 fdb2c6ecdc7e7c6e50a230a1228dff17 506 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 502 3.1E-222 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 APT61_RS15870 fdb2c6ecdc7e7c6e50a230a1228dff17 506 PANTHER PTHR10362 4 498 2.0E-252 T 22-04-2016 APT61_RS15870 fdb2c6ecdc7e7c6e50a230a1228dff17 506 Gene3D G3DSA:1.10.275.10 4 197 8.9E-77 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal APT61_RS15870 fdb2c6ecdc7e7c6e50a230a1228dff17 506 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 22-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 APT61_RS15870 fdb2c6ecdc7e7c6e50a230a1228dff17 506 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.918 T 22-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 APT61_RS15870 fdb2c6ecdc7e7c6e50a230a1228dff17 506 Gene3D G3DSA:1.20.200.10 198 503 4.9E-124 T 22-04-2016 APT61_RS15870 fdb2c6ecdc7e7c6e50a230a1228dff17 506 SUPERFAMILY SSF48557 5 503 9.42E-190 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 APT61_RS15870 fdb2c6ecdc7e7c6e50a230a1228dff17 506 PANTHER PTHR10362:SF7 4 498 2.0E-252 T 22-04-2016 APT61_RS15870 fdb2c6ecdc7e7c6e50a230a1228dff17 506 Pfam PF00221 Aromatic amino acid lyase 11 471 1.2E-187 T 22-04-2016 IPR001106 Aromatic amino acid lyase APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 SMART SM00926 53 112 1.5E-8 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 PANTHER PTHR11615:SF128 2 314 0.0 T 22-04-2016 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 PANTHER PTHR11615:SF128 346 812 0.0 T 22-04-2016 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 SUPERFAMILY SSF50692 637 812 1.79E-39 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 Gene3D G3DSA:3.40.50.740 116 201 3.3E-77 T 22-04-2016 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 Gene3D G3DSA:3.40.50.740 405 650 3.3E-77 T 22-04-2016 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 PANTHER PTHR11615 2 314 0.0 T 22-04-2016 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 PANTHER PTHR11615 346 812 0.0 T 22-04-2016 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 Gene3D G3DSA:2.40.40.20 667 812 1.3E-56 T 22-04-2016 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 Gene3D G3DSA:2.20.25.90 52 115 6.7E-15 T 22-04-2016 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 Pfam PF00384 Molybdopterin oxidoreductase 115 570 2.9E-95 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 727 754 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 Gene3D G3DSA:3.40.228.10 202 404 1.8E-81 T 22-04-2016 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 10 812 0.0 T 22-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 54 112 3.0E-13 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 Pfam PF01568 Molydopterin dinucleotide binding domain 691 804 2.7E-27 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS11745 061c0aec7c78a1b8c5b94c36cfea6059 812 SUPERFAMILY SSF53706 54 693 3.4E-173 T 22-04-2016 APT61_RS12260 6c7ebdab998247138418b72ac8b7e969 243 SUPERFAMILY SSF102712 1 103 9.94E-15 T 22-04-2016 APT61_RS12260 6c7ebdab998247138418b72ac8b7e969 243 Gene3D G3DSA:3.90.1720.10 118 234 1.1E-10 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS12260 6c7ebdab998247138418b72ac8b7e969 243 Pfam PF14464 Prokaryotic homologs of the JAB domain 4 101 2.8E-15 T 22-04-2016 IPR028090 JAB domain, prokaryotic APT61_RS12260 6c7ebdab998247138418b72ac8b7e969 243 PANTHER PTHR34858 1 236 1.3E-33 T 22-04-2016 APT61_RS12260 6c7ebdab998247138418b72ac8b7e969 243 Pfam PF00877 NlpC/P60 family 117 229 4.1E-11 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS12260 6c7ebdab998247138418b72ac8b7e969 243 PANTHER PTHR34858:SF1 1 236 1.3E-33 T 22-04-2016 APT61_RS12260 6c7ebdab998247138418b72ac8b7e969 243 Gene3D G3DSA:3.40.140.10 1 117 2.1E-16 T 22-04-2016 APT61_RS12260 6c7ebdab998247138418b72ac8b7e969 243 SUPERFAMILY SSF54001 106 233 1.08E-11 T 22-04-2016 APT61_RS10645 5c5594f7a22492ba3aa9fb410c171687 468 PIRSF PIRSF006446 2 460 2.2E-223 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 APT61_RS10645 5c5594f7a22492ba3aa9fb410c171687 468 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 5.9E-167 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 APT61_RS10645 5c5594f7a22492ba3aa9fb410c171687 468 PANTHER PTHR30365 1 457 8.2E-283 T 22-04-2016 APT61_RS10645 5c5594f7a22492ba3aa9fb410c171687 468 PANTHER PTHR30365:SF8 1 457 8.2E-283 T 22-04-2016 APT61_RS12640 228ff573818f6b83cd25c8d6045edb24 672 PANTHER PTHR30509 304 639 1.7E-152 T 22-04-2016 APT61_RS12640 228ff573818f6b83cd25c8d6045edb24 672 PANTHER PTHR30509:SF1 304 639 1.7E-152 T 22-04-2016 APT61_RS12640 228ff573818f6b83cd25c8d6045edb24 672 Pfam PF04632 Fusaric acid resistance protein family 15 658 2.8E-163 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APT61_RS12640 228ff573818f6b83cd25c8d6045edb24 672 PANTHER PTHR30509 3 253 1.7E-152 T 22-04-2016 APT61_RS12640 228ff573818f6b83cd25c8d6045edb24 672 PANTHER PTHR30509:SF1 3 253 1.7E-152 T 22-04-2016 APT61_RS11790 8df5f8affed569191cec8e07fc8e7da9 271 Gene3D G3DSA:1.10.3720.10 69 260 4.9E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS11790 8df5f8affed569191cec8e07fc8e7da9 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 259 9.7E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS11790 8df5f8affed569191cec8e07fc8e7da9 271 PANTHER PTHR30151 44 267 6.8E-40 T 22-04-2016 APT61_RS11790 8df5f8affed569191cec8e07fc8e7da9 271 SUPERFAMILY SSF161098 70 255 2.62E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS11790 8df5f8affed569191cec8e07fc8e7da9 271 PANTHER PTHR30151:SF0 44 267 6.8E-40 T 22-04-2016 APT61_RS08195 0e495479ec35585f9b6850787327b44e 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 222 4.28E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08195 0e495479ec35585f9b6850787327b44e 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 210 4.28E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08195 0e495479ec35585f9b6850787327b44e 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 194 4.28E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08195 0e495479ec35585f9b6850787327b44e 240 Pfam PF03472 Autoinducer binding domain 23 162 8.6E-32 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain APT61_RS08195 0e495479ec35585f9b6850787327b44e 240 Gene3D G3DSA:1.10.10.10 183 240 2.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS08195 0e495479ec35585f9b6850787327b44e 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 179 234 5.1E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08195 0e495479ec35585f9b6850787327b44e 240 SMART SM00421 177 234 1.3E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08195 0e495479ec35585f9b6850787327b44e 240 Gene3D G3DSA:3.30.450.80 7 182 8.4E-40 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain APT61_RS08195 0e495479ec35585f9b6850787327b44e 240 SUPERFAMILY SSF46894 165 240 6.8E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS08195 0e495479ec35585f9b6850787327b44e 240 PANTHER PTHR26402:SF432 129 240 2.7E-40 T 22-04-2016 APT61_RS08195 0e495479ec35585f9b6850787327b44e 240 ProSitePatterns PS00622 LuxR-type HTH domain signature. 194 221 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08195 0e495479ec35585f9b6850787327b44e 240 PANTHER PTHR26402 129 240 2.7E-40 T 22-04-2016 APT61_RS08195 0e495479ec35585f9b6850787327b44e 240 SUPERFAMILY SSF75516 8 170 3.4E-35 T 22-04-2016 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 Pfam PF16330 MukB hinge domain 645 810 6.8E-73 T 22-04-2016 IPR032520 MukB, hinge domain APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.192 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 1.0E-14 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937 847 878 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937 1426 1459 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937 560 814 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937 99 426 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937 897 938 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937 977 1116 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937 444 529 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937 1212 1248 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 Gene3D G3DSA:3.40.1140.10 1 226 2.7E-52 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 SUPERFAMILY SSF52540 1268 1433 1.39E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 SUPERFAMILY SSF52540 21 55 1.39E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937:SF201 847 878 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937:SF201 1426 1459 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937:SF201 560 814 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937:SF201 99 426 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937:SF201 897 938 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937:SF201 977 1116 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937:SF201 444 529 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PANTHER PTHR18937:SF201 1212 1248 0.0 T 22-04-2016 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 SUPERFAMILY SSF52540 22 224 1.11E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 PIRSF PIRSF005246 1 1482 0.0 T 22-04-2016 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 APT61_RS14895 142b8b7f0e984377a60ee5b114a113df 1482 Pfam PF04310 MukB N-terminal 2 227 1.0E-123 T 22-04-2016 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 APT61_RS08860 9eccc5da43ce0160a136884e04fa2719 572 SUPERFAMILY SSF56801 23 566 5.36E-154 T 22-04-2016 APT61_RS08860 9eccc5da43ce0160a136884e04fa2719 572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 222 233 - T 22-04-2016 IPR020845 AMP-binding, conserved site APT61_RS08860 9eccc5da43ce0160a136884e04fa2719 572 Gene3D G3DSA:3.40.50.980 34 163 4.5E-42 T 22-04-2016 APT61_RS08860 9eccc5da43ce0160a136884e04fa2719 572 Gene3D G3DSA:3.40.50.980 196 227 4.5E-42 T 22-04-2016 APT61_RS08860 9eccc5da43ce0160a136884e04fa2719 572 Pfam PF00501 AMP-binding enzyme 40 471 1.6E-114 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APT61_RS08860 9eccc5da43ce0160a136884e04fa2719 572 Gene3D G3DSA:2.30.38.10 391 462 1.3E-30 T 22-04-2016 APT61_RS08860 9eccc5da43ce0160a136884e04fa2719 572 Gene3D G3DSA:3.40.50.980 228 390 5.7E-42 T 22-04-2016 APT61_RS08860 9eccc5da43ce0160a136884e04fa2719 572 PANTHER PTHR24096 187 564 1.4E-180 T 22-04-2016 APT61_RS08860 9eccc5da43ce0160a136884e04fa2719 572 PANTHER PTHR24096 18 164 1.4E-180 T 22-04-2016 APT61_RS08860 9eccc5da43ce0160a136884e04fa2719 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 480 554 3.6E-16 T 22-04-2016 IPR025110 AMP-binding enzyme C-terminal domain APT61_RS08860 9eccc5da43ce0160a136884e04fa2719 572 Gene3D G3DSA:3.30.300.30 468 567 1.8E-28 T 22-04-2016 APT61_RS21315 03127ed681fe4c9234a788576ac3087a 193 PANTHER PTHR30037:SF4 1 183 4.4E-113 T 22-04-2016 APT61_RS21315 03127ed681fe4c9234a788576ac3087a 193 PANTHER PTHR30037 1 183 4.4E-113 T 22-04-2016 APT61_RS21315 03127ed681fe4c9234a788576ac3087a 193 SUPERFAMILY SSF48150 1 184 1.33E-79 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APT61_RS21315 03127ed681fe4c9234a788576ac3087a 193 Gene3D G3DSA:1.10.340.30 1 182 4.6E-85 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APT61_RS21315 03127ed681fe4c9234a788576ac3087a 193 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 2 181 2.7E-89 T 22-04-2016 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 APT61_RS21315 03127ed681fe4c9234a788576ac3087a 193 Pfam PF03352 Methyladenine glycosylase 6 181 1.1E-78 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 APT61_RS07720 52adbd75a751afd17ef5644128f17fdc 478 Pfam PF01050 Mannose-6-phosphate isomerase 323 473 6.6E-76 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 APT61_RS07720 52adbd75a751afd17ef5644128f17fdc 478 Pfam PF00483 Nucleotidyl transferase 8 294 7.6E-79 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APT61_RS07720 52adbd75a751afd17ef5644128f17fdc 478 PANTHER PTHR12526 360 478 2.6E-115 T 22-04-2016 APT61_RS07720 52adbd75a751afd17ef5644128f17fdc 478 PANTHER PTHR12526 158 297 2.6E-115 T 22-04-2016 APT61_RS07720 52adbd75a751afd17ef5644128f17fdc 478 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 6 477 1.3E-242 T 22-04-2016 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 APT61_RS07720 52adbd75a751afd17ef5644128f17fdc 478 Gene3D G3DSA:3.90.550.10 5 279 2.9E-101 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS07720 52adbd75a751afd17ef5644128f17fdc 478 PANTHER PTHR12526:SF387 360 478 2.6E-115 T 22-04-2016 APT61_RS07720 52adbd75a751afd17ef5644128f17fdc 478 PANTHER PTHR12526:SF387 158 297 2.6E-115 T 22-04-2016 APT61_RS07720 52adbd75a751afd17ef5644128f17fdc 478 SUPERFAMILY SSF51182 193 477 7.12E-90 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS07720 52adbd75a751afd17ef5644128f17fdc 478 SUPERFAMILY SSF53448 6 290 5.16E-74 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS07720 52adbd75a751afd17ef5644128f17fdc 478 Gene3D G3DSA:2.60.120.10 364 477 3.7E-48 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS00355 b9803c1408b2cdd10956398114c6bb4f 276 SUPERFAMILY SSF53927 24 272 6.92E-76 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APT61_RS00355 b9803c1408b2cdd10956398114c6bb4f 276 Gene3D G3DSA:3.40.140.10 136 273 1.7E-46 T 22-04-2016 APT61_RS00355 b9803c1408b2cdd10956398114c6bb4f 276 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 32 273 2.1E-90 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 APT61_RS00355 b9803c1408b2cdd10956398114c6bb4f 276 Pfam PF02634 FdhD/NarQ family 35 272 2.8E-68 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 APT61_RS00355 b9803c1408b2cdd10956398114c6bb4f 276 Gene3D G3DSA:3.10.20.10 37 122 1.1E-30 T 22-04-2016 APT61_RS00355 b9803c1408b2cdd10956398114c6bb4f 276 Hamap MF_00187 Protein FdhD [fdhD]. 11 273 35.777 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 APT61_RS00355 b9803c1408b2cdd10956398114c6bb4f 276 PIRSF PIRSF015626 3 275 4.3E-77 T 22-04-2016 IPR003786 Protein FdhD GO:0016783 APT61_RS00355 b9803c1408b2cdd10956398114c6bb4f 276 PANTHER PTHR30592 2 272 1.9E-123 T 22-04-2016 APT61_RS00355 b9803c1408b2cdd10956398114c6bb4f 276 PANTHER PTHR30592:SF1 2 272 1.9E-123 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1235 0.0 T 22-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 PANTHER PTHR11615:SF165 852 877 0.0 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 PANTHER PTHR11615:SF165 34 348 0.0 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 PANTHER PTHR11615:SF165 366 412 0.0 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 PANTHER PTHR11615:SF165 697 836 0.0 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 PANTHER PTHR11615:SF165 995 1229 0.0 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 Pfam PF01568 Molydopterin dinucleotide binding domain 1088 1202 1.0E-21 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 SMART SM00926 43 105 1.1E-7 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1125 1152 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 Gene3D G3DSA:4.10.1200.10 1 28 1.3E-19 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 777 794 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 SUPERFAMILY SSF53706 4 1070 0.0 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 Gene3D G3DSA:3.90.55.10 779 836 2.7E-7 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 Pfam PF00384 Molybdopterin oxidoreductase 108 833 3.4E-190 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 Gene3D G3DSA:2.20.25.90 52 98 4.9E-32 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 PANTHER PTHR11615 852 877 0.0 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 PANTHER PTHR11615 34 348 0.0 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 PANTHER PTHR11615 366 412 0.0 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 PANTHER PTHR11615 697 836 0.0 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 PANTHER PTHR11615 995 1229 0.0 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 Gene3D G3DSA:3.40.50.740 108 203 3.0E-6 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 Gene3D G3DSA:2.40.40.20 1054 1233 5.9E-46 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 6.6E-17 T 22-04-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 SUPERFAMILY SSF50692 1082 1235 7.69E-48 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 Gene3D G3DSA:3.40.50.740 593 778 2.4E-60 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 Gene3D G3DSA:3.40.228.10 489 592 8.9E-80 T 22-04-2016 APT61_RS09295 c70b9d0a6421957c30a5c47524e34cc9 1247 Gene3D G3DSA:3.40.228.10 218 336 8.9E-80 T 22-04-2016 APT61_RS06650 32c855d74494cdd139b2542d5ec7c1b4 93 Pfam PF08891 YfcL protein 4 87 8.7E-35 T 22-04-2016 IPR014987 Uncharacterised protein family YfcL APT61_RS07735 e2753ef4d56c415a3a4161dbf9eae678 492 PANTHER PTHR30250 1 491 1.5E-247 T 22-04-2016 APT61_RS07735 e2753ef4d56c415a3a4161dbf9eae678 492 PANTHER PTHR30250:SF3 1 491 1.5E-247 T 22-04-2016 APT61_RS07735 e2753ef4d56c415a3a4161dbf9eae678 492 Pfam PF13440 Polysaccharide biosynthesis protein 31 325 2.7E-68 T 22-04-2016 APT61_RS12085 d3b08cfe40ccf9f1f252250da04253e5 302 Gene3D G3DSA:3.40.190.10 92 186 3.1E-22 T 22-04-2016 APT61_RS12085 d3b08cfe40ccf9f1f252250da04253e5 302 Pfam PF03466 LysR substrate binding domain 91 297 7.3E-37 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS12085 d3b08cfe40ccf9f1f252250da04253e5 302 SUPERFAMILY SSF46785 5 115 3.12E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS12085 d3b08cfe40ccf9f1f252250da04253e5 302 SUPERFAMILY SSF53850 92 300 2.02E-38 T 22-04-2016 APT61_RS12085 d3b08cfe40ccf9f1f252250da04253e5 302 Gene3D G3DSA:3.40.190.10 187 250 1.0E-7 T 22-04-2016 APT61_RS12085 d3b08cfe40ccf9f1f252250da04253e5 302 PANTHER PTHR30126:SF3 5 301 1.0E-131 T 22-04-2016 APT61_RS12085 d3b08cfe40ccf9f1f252250da04253e5 302 PANTHER PTHR30126 5 301 1.0E-131 T 22-04-2016 APT61_RS12085 d3b08cfe40ccf9f1f252250da04253e5 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS12085 d3b08cfe40ccf9f1f252250da04253e5 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS12085 d3b08cfe40ccf9f1f252250da04253e5 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.9E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS12085 d3b08cfe40ccf9f1f252250da04253e5 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS12085 d3b08cfe40ccf9f1f252250da04253e5 302 Gene3D G3DSA:1.10.10.10 6 91 5.9E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 SUPERFAMILY SSF52540 5 228 1.31E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 Pfam PF00005 ABC transporter 26 165 1.9E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 Pfam PF00005 ABC transporter 346 489 7.5E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 PANTHER PTHR24220:SF546 7 229 1.4E-280 T 22-04-2016 APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 PANTHER PTHR24220:SF546 345 449 1.4E-280 T 22-04-2016 APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 PANTHER PTHR24220:SF546 252 300 1.4E-280 T 22-04-2016 APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 SUPERFAMILY SSF52540 324 548 5.11E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 PANTHER PTHR24220 7 229 1.4E-280 T 22-04-2016 APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 PANTHER PTHR24220 345 449 1.4E-280 T 22-04-2016 APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 PANTHER PTHR24220 252 300 1.4E-280 T 22-04-2016 APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 Gene3D G3DSA:3.40.50.300 324 550 2.4E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 Gene3D G3DSA:3.40.50.300 2 228 8.7E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 SMART SM00382 32 266 7.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15760 20550ea5570cd77b77162caf6143b86e 578 SMART SM00382 354 535 1.1E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS03425 4d207081267f486c741c1f0f1ee7eb20 366 SUPERFAMILY SSF69279 15 188 2.89E-27 T 22-04-2016 APT61_RS03425 4d207081267f486c741c1f0f1ee7eb20 366 Pfam PF05954 Phage late control gene D protein (GPD) 90 345 2.9E-35 T 22-04-2016 APT61_RS14445 677f924e03eeaf5614b17cdd7e8b9955 413 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 31 363 7.1E-17 T 22-04-2016 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 APT61_RS14445 677f924e03eeaf5614b17cdd7e8b9955 413 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 305 321 - T 22-04-2016 IPR033379 Histidine acid phosphatase active site APT61_RS14445 677f924e03eeaf5614b17cdd7e8b9955 413 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 31 45 - T 22-04-2016 IPR033379 Histidine acid phosphatase active site APT61_RS14445 677f924e03eeaf5614b17cdd7e8b9955 413 Gene3D G3DSA:3.40.50.1240 142 274 4.9E-66 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APT61_RS14445 677f924e03eeaf5614b17cdd7e8b9955 413 PANTHER PTHR11567:SF135 1 411 4.1E-230 T 22-04-2016 APT61_RS14445 677f924e03eeaf5614b17cdd7e8b9955 413 SUPERFAMILY SSF53254 25 410 1.28E-76 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APT61_RS14445 677f924e03eeaf5614b17cdd7e8b9955 413 Gene3D G3DSA:3.40.50.1240 276 411 7.0E-83 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APT61_RS14445 677f924e03eeaf5614b17cdd7e8b9955 413 Gene3D G3DSA:3.40.50.1240 26 141 7.0E-83 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APT61_RS14445 677f924e03eeaf5614b17cdd7e8b9955 413 PANTHER PTHR11567 1 411 4.1E-230 T 22-04-2016 APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 PANTHER PTHR18934 13 702 0.0 T 22-04-2016 APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 PANTHER PTHR18934 739 867 0.0 T 22-04-2016 APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 SMART SM00847 464 559 1.2E-36 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 Gene3D G3DSA:3.40.50.300 77 233 3.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 Pfam PF00271 Helicase conserved C-terminal domain 286 403 2.0E-10 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 SMART SM00382 92 384 1.3E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 SMART SM00490 304 404 4.1E-15 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 PANTHER PTHR18934:SF109 13 702 0.0 T 22-04-2016 APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 PANTHER PTHR18934:SF109 739 867 0.0 T 22-04-2016 APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 Gene3D G3DSA:3.40.50.300 483 612 8.7E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 Pfam PF00270 DEAD/DEAH box helicase 84 233 1.2E-5 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 Gene3D G3DSA:3.40.50.300 271 416 1.3E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 13 1297 0.0 T 22-04-2016 IPR010222 RNA helicase HrpA GO:0004004 APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 588 698 1.6E-15 T 22-04-2016 IPR011709 Domain of unknown function DUF1605 APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 SUPERFAMILY SSF52540 74 598 1.74E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 Pfam PF11898 Domain of unknown function (DUF3418) 713 1297 3.6E-238 T 22-04-2016 IPR024590 RNA helicase HrpA, C-terminal APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 Pfam PF04408 Helicase associated domain (HA2) 466 557 6.3E-16 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 APT61_RS10155 baa147517ef4b904b3eaf60d29b25207 1300 SMART SM00487 75 259 4.8E-27 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS08635 045b95aa8c62939edf7525ffc6c41af5 392 Gene3D G3DSA:3.40.50.20 5 120 6.2E-41 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS08635 045b95aa8c62939edf7525ffc6c41af5 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 51.869 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 APT61_RS08635 045b95aa8c62939edf7525ffc6c41af5 392 Gene3D G3DSA:3.30.470.20 200 387 2.0E-66 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS08635 045b95aa8c62939edf7525ffc6c41af5 392 SUPERFAMILY SSF56059 113 314 6.54E-57 T 22-04-2016 APT61_RS08635 045b95aa8c62939edf7525ffc6c41af5 392 SUPERFAMILY SSF51246 319 390 6.28E-20 T 22-04-2016 IPR011054 Rudiment single hybrid motif APT61_RS08635 045b95aa8c62939edf7525ffc6c41af5 392 Gene3D G3DSA:3.30.1490.20 123 199 1.1E-27 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APT61_RS08635 045b95aa8c62939edf7525ffc6c41af5 392 PANTHER PTHR11609 1 381 1.5E-221 T 22-04-2016 APT61_RS08635 045b95aa8c62939edf7525ffc6c41af5 392 Pfam PF02222 ATP-grasp domain 123 295 1.2E-55 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 APT61_RS08635 045b95aa8c62939edf7525ffc6c41af5 392 SUPERFAMILY SSF52440 4 112 5.18E-36 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS08635 045b95aa8c62939edf7525ffc6c41af5 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 390 6.4E-190 T 22-04-2016 IPR005862 Phosphoribosylglycinamide formyltransferase 2 GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 UniPathway: UPA00074 APT61_RS08635 045b95aa8c62939edf7525ffc6c41af5 392 PANTHER PTHR11609:SF7 1 381 1.5E-221 T 22-04-2016 APT61_RS18785 aeba0d07cc9df499efeaaffbb8c4cf62 641 PANTHER PTHR11935:SF93 234 459 3.9E-164 T 22-04-2016 APT61_RS18785 aeba0d07cc9df499efeaaffbb8c4cf62 641 SMART SM00849 112 334 1.3E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS18785 aeba0d07cc9df499efeaaffbb8c4cf62 641 Gene3D G3DSA:3.60.15.10 240 365 1.1E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS18785 aeba0d07cc9df499efeaaffbb8c4cf62 641 Gene3D G3DSA:3.60.15.10 97 198 1.1E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS18785 aeba0d07cc9df499efeaaffbb8c4cf62 641 Pfam PF00753 Metallo-beta-lactamase superfamily 109 334 2.1E-36 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS18785 aeba0d07cc9df499efeaaffbb8c4cf62 641 Gene3D G3DSA:3.30.1050.10 526 630 4.5E-9 T 22-04-2016 IPR003033 SCP2 sterol-binding domain APT61_RS18785 aeba0d07cc9df499efeaaffbb8c4cf62 641 SUPERFAMILY SSF56281 12 511 6.44E-151 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS18785 aeba0d07cc9df499efeaaffbb8c4cf62 641 PANTHER PTHR11935 234 459 3.9E-164 T 22-04-2016 APT61_RS18785 aeba0d07cc9df499efeaaffbb8c4cf62 641 PANTHER PTHR11935:SF93 62 217 3.9E-164 T 22-04-2016 APT61_RS18785 aeba0d07cc9df499efeaaffbb8c4cf62 641 PANTHER PTHR11935 62 217 3.9E-164 T 22-04-2016 APT61_RS18785 aeba0d07cc9df499efeaaffbb8c4cf62 641 SUPERFAMILY SSF55718 519 641 2.35E-35 T 22-04-2016 IPR003033 SCP2 sterol-binding domain APT61_RS18785 aeba0d07cc9df499efeaaffbb8c4cf62 641 Pfam PF14863 Alkyl sulfatase dimerisation 371 509 9.6E-61 T 22-04-2016 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 APT61_RS18785 aeba0d07cc9df499efeaaffbb8c4cf62 641 Pfam PF14864 Alkyl sulfatase C-terminal 517 641 5.3E-38 T 22-04-2016 IPR029229 Alkyl sulfatase, C-terminal APT61_RS03000 51521d3e699553aef097ed7deb2b0856 233 PANTHER PTHR13903:SF14 1 233 2.6E-166 T 22-04-2016 APT61_RS03000 51521d3e699553aef097ed7deb2b0856 233 PIRSF PIRSF006232 1 230 2.6E-32 T 22-04-2016 IPR012093 Pirin APT61_RS03000 51521d3e699553aef097ed7deb2b0856 233 Pfam PF02678 Pirin 5 119 8.2E-23 T 22-04-2016 IPR003829 Pirin, N-terminal domain APT61_RS03000 51521d3e699553aef097ed7deb2b0856 233 SUPERFAMILY SSF51182 1 231 9.9E-46 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS03000 51521d3e699553aef097ed7deb2b0856 233 PANTHER PTHR13903 1 233 2.6E-166 T 22-04-2016 IPR012093 Pirin APT61_RS03000 51521d3e699553aef097ed7deb2b0856 233 Gene3D G3DSA:2.60.120.10 3 231 3.1E-34 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS15805 3d9c5674b67febead3055b2f89e6ed4f 81 Pfam PF02597 ThiS family 4 81 2.0E-21 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 APT61_RS15805 3d9c5674b67febead3055b2f89e6ed4f 81 SUPERFAMILY SSF54285 1 81 5.61E-23 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APT61_RS15805 3d9c5674b67febead3055b2f89e6ed4f 81 PANTHER PTHR33359 1 81 5.7E-26 T 22-04-2016 APT61_RS15805 3d9c5674b67febead3055b2f89e6ed4f 81 Gene3D G3DSA:3.10.20.30 1 81 6.5E-25 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS15805 3d9c5674b67febead3055b2f89e6ed4f 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 1.1E-24 T 22-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 APT61_RS01965 f564abf227d71241ae42ed88f7aae598 634 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS01965 f564abf227d71241ae42ed88f7aae598 634 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS01965 f564abf227d71241ae42ed88f7aae598 634 SUPERFAMILY SSF52540 119 252 3.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01965 f564abf227d71241ae42ed88f7aae598 634 SUPERFAMILY SSF52540 2 92 3.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01965 f564abf227d71241ae42ed88f7aae598 634 PANTHER PTHR19211:SF49 1 554 0.0 T 22-04-2016 APT61_RS01965 f564abf227d71241ae42ed88f7aae598 634 SUPERFAMILY SSF52540 293 516 1.33E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01965 f564abf227d71241ae42ed88f7aae598 634 Pfam PF12848 ABC transporter 217 296 1.5E-28 T 22-04-2016 IPR032781 ABC-transporter extension domain APT61_RS01965 f564abf227d71241ae42ed88f7aae598 634 PANTHER PTHR19211 1 554 0.0 T 22-04-2016 APT61_RS01965 f564abf227d71241ae42ed88f7aae598 634 Pfam PF00005 ABC transporter 328 459 1.8E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS01965 f564abf227d71241ae42ed88f7aae598 634 Pfam PF00005 ABC transporter 17 178 8.4E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS01965 f564abf227d71241ae42ed88f7aae598 634 SMART SM00382 337 506 5.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS01965 f564abf227d71241ae42ed88f7aae598 634 SMART SM00382 26 223 4.9E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS01965 f564abf227d71241ae42ed88f7aae598 634 Gene3D G3DSA:3.40.50.300 310 527 4.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01965 f564abf227d71241ae42ed88f7aae598 634 Gene3D G3DSA:3.40.50.300 1 265 2.0E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14145 d40ffce305ac08a875cb9a3c21c752d8 81 Gene3D G3DSA:3.30.910.10 1 80 2.8E-32 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APT61_RS14145 d40ffce305ac08a875cb9a3c21c752d8 81 PANTHER PTHR36572 1 81 6.5E-41 T 22-04-2016 APT61_RS14145 d40ffce305ac08a875cb9a3c21c752d8 81 PANTHER PTHR36572:SF2 1 81 6.5E-41 T 22-04-2016 APT61_RS14145 d40ffce305ac08a875cb9a3c21c752d8 81 SUPERFAMILY SSF54857 1 79 3.66E-26 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APT61_RS14145 d40ffce305ac08a875cb9a3c21c752d8 81 Pfam PF06183 DinI-like family 14 78 2.7E-26 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APT61_RS11585 9c760f1d56948176aecd0081ace951bf 299 Pfam PF00892 EamA-like transporter family 7 130 8.3E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS11585 9c760f1d56948176aecd0081ace951bf 299 Pfam PF00892 EamA-like transporter family 143 286 6.7E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS11585 9c760f1d56948176aecd0081ace951bf 299 SUPERFAMILY SSF103481 205 287 1.7E-7 T 22-04-2016 APT61_RS11585 9c760f1d56948176aecd0081ace951bf 299 SUPERFAMILY SSF103481 41 132 6.93E-12 T 22-04-2016 APT61_RS11585 9c760f1d56948176aecd0081ace951bf 299 PANTHER PTHR32322 3 298 3.3E-110 T 22-04-2016 APT61_RS11585 9c760f1d56948176aecd0081ace951bf 299 PANTHER PTHR32322:SF9 3 298 3.3E-110 T 22-04-2016 APT61_RS19655 03040b45297366f7344a7bb9c9706cab 385 Gene3D G3DSA:1.20.1250.20 203 380 8.5E-16 T 22-04-2016 APT61_RS19655 03040b45297366f7344a7bb9c9706cab 385 Gene3D G3DSA:1.20.1250.20 16 177 2.0E-15 T 22-04-2016 APT61_RS19655 03040b45297366f7344a7bb9c9706cab 385 PANTHER PTHR23514 11 385 6.7E-114 T 22-04-2016 APT61_RS19655 03040b45297366f7344a7bb9c9706cab 385 SUPERFAMILY SSF103473 15 375 3.92E-39 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS19655 03040b45297366f7344a7bb9c9706cab 385 PANTHER PTHR23514:SF13 11 385 6.7E-114 T 22-04-2016 APT61_RS19655 03040b45297366f7344a7bb9c9706cab 385 Pfam PF07690 Major Facilitator Superfamily 219 373 3.3E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS04730 08f76c580dc868c98fc8370e837153a1 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 22-04-2016 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS04730 08f76c580dc868c98fc8370e837153a1 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 3 342 7.7E-96 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS04730 08f76c580dc868c98fc8370e837153a1 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 8 167 8.1E-41 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS04730 08f76c580dc868c98fc8370e837153a1 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 188 337 2.6E-19 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS04730 08f76c580dc868c98fc8370e837153a1 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 342 28.651 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS04730 08f76c580dc868c98fc8370e837153a1 349 PANTHER PTHR13326 1 340 2.3E-90 T 22-04-2016 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS04730 08f76c580dc868c98fc8370e837153a1 349 SUPERFAMILY SSF55120 3 340 8.78E-104 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS19585 5ee57d8ee15deae5a59669aa1ad6f9fb 107 Gene3D G3DSA:3.30.70.900 1 98 1.8E-21 T 22-04-2016 APT61_RS19585 5ee57d8ee15deae5a59669aa1ad6f9fb 107 PANTHER PTHR37811 1 105 1.2E-41 T 22-04-2016 APT61_RS19585 5ee57d8ee15deae5a59669aa1ad6f9fb 107 SUPERFAMILY SSF54909 1 98 1.11E-26 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS19585 5ee57d8ee15deae5a59669aa1ad6f9fb 107 PANTHER PTHR37811:SF2 1 105 1.2E-41 T 22-04-2016 APT61_RS19585 5ee57d8ee15deae5a59669aa1ad6f9fb 107 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 7.9E-14 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain APT61_RS02455 293f11d855358de0ce3c1368d7e43b62 484 SUPERFAMILY SSF53720 6 482 2.09E-168 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS02455 293f11d855358de0ce3c1368d7e43b62 484 Gene3D G3DSA:3.40.309.10 270 445 2.0E-68 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS02455 293f11d855358de0ce3c1368d7e43b62 484 PANTHER PTHR11699:SF49 1 478 3.9E-264 T 22-04-2016 APT61_RS02455 293f11d855358de0ce3c1368d7e43b62 484 Gene3D G3DSA:3.40.605.10 13 269 2.2E-100 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS02455 293f11d855358de0ce3c1368d7e43b62 484 PANTHER PTHR11699 1 478 3.9E-264 T 22-04-2016 APT61_RS02455 293f11d855358de0ce3c1368d7e43b62 484 Pfam PF00171 Aldehyde dehydrogenase family 27 478 6.0E-171 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS02455 293f11d855358de0ce3c1368d7e43b62 484 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 31 477 1.8E-200 T 22-04-2016 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 UniPathway: UPA00733 APT61_RS02455 293f11d855358de0ce3c1368d7e43b62 484 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APT61_RS08040 a7a54e2c9e104160b931ff51d21aa1ae 207 SUPERFAMILY SSF46894 129 186 1.22E-10 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS08040 a7a54e2c9e104160b931ff51d21aa1ae 207 Gene3D G3DSA:1.10.10.10 134 189 5.9E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS08040 a7a54e2c9e104160b931ff51d21aa1ae 207 Hamap MF_00982 Transcriptional regulatory protein RcsA [rcsA]. 1 207 48.774 T 22-04-2016 IPR030866 Transcriptional regulatory protein RcsA GO:0006355 APT61_RS08040 a7a54e2c9e104160b931ff51d21aa1ae 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08040 a7a54e2c9e104160b931ff51d21aa1ae 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 1.2E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08040 a7a54e2c9e104160b931ff51d21aa1ae 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 1.2E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08040 a7a54e2c9e104160b931ff51d21aa1ae 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 1.2E-7 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08040 a7a54e2c9e104160b931ff51d21aa1ae 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 3.4E-19 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS08040 a7a54e2c9e104160b931ff51d21aa1ae 207 SMART SM00421 135 192 5.6E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS06370 e0c8c3437f2c82303a2ef31d35fab7cf 71 PANTHER PTHR40613 1 71 1.1E-35 T 22-04-2016 APT61_RS06370 e0c8c3437f2c82303a2ef31d35fab7cf 71 PANTHER PTHR40613:SF1 1 71 1.1E-35 T 22-04-2016 APT61_RS06370 e0c8c3437f2c82303a2ef31d35fab7cf 71 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 2.0E-23 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor APT61_RS06370 e0c8c3437f2c82303a2ef31d35fab7cf 71 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 2 68 5.4E-29 T 22-04-2016 IPR024530 Putative quorum-sensing-regulated virulence factor APT61_RS02245 62f29b016e65f427454eb29e96e654e8 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 6.7E-24 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS02245 62f29b016e65f427454eb29e96e654e8 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 32.128 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS02245 62f29b016e65f427454eb29e96e654e8 272 PANTHER PTHR21089:SF2 1 270 3.3E-153 T 22-04-2016 APT61_RS02245 62f29b016e65f427454eb29e96e654e8 272 PANTHER PTHR21089 1 270 3.3E-153 T 22-04-2016 APT61_RS02245 62f29b016e65f427454eb29e96e654e8 272 SUPERFAMILY SSF53223 2 101 1.32E-31 T 22-04-2016 APT61_RS02245 62f29b016e65f427454eb29e96e654e8 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 119 190 3.6E-9 T 22-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase APT61_RS02245 62f29b016e65f427454eb29e96e654e8 272 Gene3D G3DSA:3.40.192.10 2 107 2.4E-37 T 22-04-2016 APT61_RS02245 62f29b016e65f427454eb29e96e654e8 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 8.3E-101 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS02245 62f29b016e65f427454eb29e96e654e8 272 Gene3D G3DSA:3.40.50.720 108 244 6.1E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02245 62f29b016e65f427454eb29e96e654e8 272 SUPERFAMILY SSF51735 102 268 5.11E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00510 639f02511a1cc09064ecc48abeafacad 139 Pfam PF05656 Protein of unknown function (DUF805) 8 132 1.4E-20 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 APT61_RS00510 639f02511a1cc09064ecc48abeafacad 139 PANTHER PTHR34980:SF1 1 139 5.3E-37 T 22-04-2016 APT61_RS00510 639f02511a1cc09064ecc48abeafacad 139 PANTHER PTHR34980 1 139 5.3E-37 T 22-04-2016 APT61_RS01220 b97a303c91b16724048eb3a79da2fbca 440 PANTHER PTHR23508:SF16 3 440 5.7E-235 T 22-04-2016 APT61_RS01220 b97a303c91b16724048eb3a79da2fbca 440 SUPERFAMILY SSF103473 18 439 8.37E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS01220 b97a303c91b16724048eb3a79da2fbca 440 PANTHER PTHR23508 3 440 5.7E-235 T 22-04-2016 APT61_RS01220 b97a303c91b16724048eb3a79da2fbca 440 Pfam PF07690 Major Facilitator Superfamily 29 383 3.5E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS01220 b97a303c91b16724048eb3a79da2fbca 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 308 325 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS01220 b97a303c91b16724048eb3a79da2fbca 440 Gene3D G3DSA:1.20.1250.20 20 224 1.0E-23 T 22-04-2016 APT61_RS01220 b97a303c91b16724048eb3a79da2fbca 440 Gene3D G3DSA:1.20.1250.20 249 438 5.8E-18 T 22-04-2016 APT61_RS01220 b97a303c91b16724048eb3a79da2fbca 440 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 426 5.0E-152 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 APT61_RS11485 eadbfecd8b1b5f6a2d01e5e7c8ae9ee3 292 SUPERFAMILY SSF53850 85 284 1.45E-39 T 22-04-2016 APT61_RS11485 eadbfecd8b1b5f6a2d01e5e7c8ae9ee3 292 Gene3D G3DSA:3.40.190.10 170 256 3.3E-13 T 22-04-2016 APT61_RS11485 eadbfecd8b1b5f6a2d01e5e7c8ae9ee3 292 SUPERFAMILY SSF46785 1 108 2.87E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11485 eadbfecd8b1b5f6a2d01e5e7c8ae9ee3 292 Pfam PF03466 LysR substrate binding domain 85 284 9.0E-47 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS11485 eadbfecd8b1b5f6a2d01e5e7c8ae9ee3 292 PANTHER PTHR30126 1 285 8.2E-127 T 22-04-2016 APT61_RS11485 eadbfecd8b1b5f6a2d01e5e7c8ae9ee3 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.3E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS11485 eadbfecd8b1b5f6a2d01e5e7c8ae9ee3 292 Gene3D G3DSA:1.10.10.10 1 82 5.0E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11485 eadbfecd8b1b5f6a2d01e5e7c8ae9ee3 292 Gene3D G3DSA:3.40.190.10 89 169 4.6E-19 T 22-04-2016 APT61_RS11485 eadbfecd8b1b5f6a2d01e5e7c8ae9ee3 292 PANTHER PTHR30126:SF31 1 285 8.2E-127 T 22-04-2016 APT61_RS09075 74d2e6619b9c68931f1375fe2b5c2672 258 SUPERFAMILY SSF46689 158 206 5.72E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS09075 74d2e6619b9c68931f1375fe2b5c2672 258 Gene3D G3DSA:1.10.10.60 209 253 1.1E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS09075 74d2e6619b9c68931f1375fe2b5c2672 258 SUPERFAMILY SSF46689 208 253 3.94E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS09075 74d2e6619b9c68931f1375fe2b5c2672 258 PANTHER PTHR11019:SF75 1 257 9.7E-47 T 22-04-2016 APT61_RS09075 74d2e6619b9c68931f1375fe2b5c2672 258 Pfam PF12833 Helix-turn-helix domain 178 254 3.7E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS09075 74d2e6619b9c68931f1375fe2b5c2672 258 SMART SM00342 172 254 2.2E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS09075 74d2e6619b9c68931f1375fe2b5c2672 258 Gene3D G3DSA:1.10.10.60 156 208 2.2E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS09075 74d2e6619b9c68931f1375fe2b5c2672 258 PANTHER PTHR11019 1 257 9.7E-47 T 22-04-2016 APT61_RS09075 74d2e6619b9c68931f1375fe2b5c2672 258 SUPERFAMILY SSF51215 10 137 5.36E-15 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS09075 74d2e6619b9c68931f1375fe2b5c2672 258 Pfam PF02311 AraC-like ligand binding domain 8 134 1.1E-14 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS09075 74d2e6619b9c68931f1375fe2b5c2672 258 Gene3D G3DSA:2.60.120.280 10 125 9.3E-11 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS04175 de023a0e862726aa62dd08b8b46ac576 326 SUPERFAMILY SSF101790 244 325 2.75E-25 T 22-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain APT61_RS04175 de023a0e862726aa62dd08b8b46ac576 326 Pfam PF01571 Aminomethyltransferase folate-binding domain 32 136 2.9E-9 T 22-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal APT61_RS04175 de023a0e862726aa62dd08b8b46ac576 326 PANTHER PTHR22602 1 311 6.8E-79 T 22-04-2016 APT61_RS04175 de023a0e862726aa62dd08b8b46ac576 326 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 321 48.022 T 22-04-2016 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 APT61_RS04175 de023a0e862726aa62dd08b8b46ac576 326 SUPERFAMILY SSF103025 3 242 1.04E-67 T 22-04-2016 APT61_RS04175 de023a0e862726aa62dd08b8b46ac576 326 Gene3D G3DSA:3.30.70.1400 27 112 5.4E-34 T 22-04-2016 APT61_RS04175 de023a0e862726aa62dd08b8b46ac576 326 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 187 252 6.1E-26 T 22-04-2016 IPR017703 YgfZ/GcvT conserved site APT61_RS04175 de023a0e862726aa62dd08b8b46ac576 326 PANTHER PTHR22602:SF0 1 311 6.8E-79 T 22-04-2016 APT61_RS20940 8569a84bb6ff8afb631466b2736fc05f 439 PANTHER PTHR11206 8 434 2.2E-142 T 22-04-2016 APT61_RS20940 8569a84bb6ff8afb631466b2736fc05f 439 PANTHER PTHR11206:SF94 8 434 2.2E-142 T 22-04-2016 APT61_RS20940 8569a84bb6ff8afb631466b2736fc05f 439 PIRSF PIRSF006603 4 437 2.0E-50 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APT61_RS20940 8569a84bb6ff8afb631466b2736fc05f 439 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 410 1.8E-101 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APT61_RS20940 8569a84bb6ff8afb631466b2736fc05f 439 Pfam PF01554 MatE 17 178 5.8E-34 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APT61_RS20940 8569a84bb6ff8afb631466b2736fc05f 439 Pfam PF01554 MatE 241 396 7.8E-14 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APT61_RS12755 9a6c14e4a53c6d6c3502f719a0ce39e0 210 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 112 123 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS12755 9a6c14e4a53c6d6c3502f719a0ce39e0 210 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 15 176 1.6E-79 T 22-04-2016 IPR014297 Dimethylsulphoxide reductase, chain B APT61_RS12755 9a6c14e4a53c6d6c3502f719a0ce39e0 210 PANTHER PTHR11938 66 170 1.4E-60 T 22-04-2016 APT61_RS12755 9a6c14e4a53c6d6c3502f719a0ce39e0 210 PANTHER PTHR11938 14 50 1.4E-60 T 22-04-2016 APT61_RS12755 9a6c14e4a53c6d6c3502f719a0ce39e0 210 Gene3D G3DSA:3.30.70.20 88 114 1.8E-10 T 22-04-2016 APT61_RS12755 9a6c14e4a53c6d6c3502f719a0ce39e0 210 Pfam PF13247 4Fe-4S dicluster domain 74 166 1.6E-25 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS12755 9a6c14e4a53c6d6c3502f719a0ce39e0 210 SUPERFAMILY SSF54862 14 201 3.14E-66 T 22-04-2016 APT61_RS12755 9a6c14e4a53c6d6c3502f719a0ce39e0 210 PANTHER PTHR11938:SF85 66 170 1.4E-60 T 22-04-2016 APT61_RS12755 9a6c14e4a53c6d6c3502f719a0ce39e0 210 PANTHER PTHR11938:SF85 14 50 1.4E-60 T 22-04-2016 APT61_RS12755 9a6c14e4a53c6d6c3502f719a0ce39e0 210 Gene3D G3DSA:3.30.70.20 115 150 6.0E-18 T 22-04-2016 APT61_RS12755 9a6c14e4a53c6d6c3502f719a0ce39e0 210 Gene3D G3DSA:3.30.70.20 151 201 3.9E-12 T 22-04-2016 APT61_RS12755 9a6c14e4a53c6d6c3502f719a0ce39e0 210 Gene3D G3DSA:3.30.70.20 14 87 7.4E-15 T 22-04-2016 APT61_RS12985 2aa6561b0c8c62517ebe13cc33b53083 237 PANTHER PTHR33121 1 235 2.8E-70 T 22-04-2016 APT61_RS12985 2aa6561b0c8c62517ebe13cc33b53083 237 Gene3D G3DSA:3.20.20.450 21 236 2.5E-9 T 22-04-2016 IPR001633 EAL domain APT61_RS12985 2aa6561b0c8c62517ebe13cc33b53083 237 PANTHER PTHR33121:SF2 1 235 2.8E-70 T 22-04-2016 APT61_RS12985 2aa6561b0c8c62517ebe13cc33b53083 237 Pfam PF00563 EAL domain 21 222 6.6E-10 T 22-04-2016 IPR001633 EAL domain APT61_RS12985 2aa6561b0c8c62517ebe13cc33b53083 237 SUPERFAMILY SSF141868 21 223 2.48E-11 T 22-04-2016 IPR001633 EAL domain APT61_RS00655 0bda2248b91c5914c93eec1bd6fc44d3 118 SUPERFAMILY SSF52794 9 103 8.55E-30 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS00655 0bda2248b91c5914c93eec1bd6fc44d3 118 Gene3D G3DSA:3.40.50.2300 8 103 3.6E-34 T 22-04-2016 APT61_RS00655 0bda2248b91c5914c93eec1bd6fc44d3 118 PANTHER PTHR30505:SF7 7 118 2.5E-79 T 22-04-2016 APT61_RS00655 0bda2248b91c5914c93eec1bd6fc44d3 118 PANTHER PTHR30505 7 118 2.5E-79 T 22-04-2016 APT61_RS00655 0bda2248b91c5914c93eec1bd6fc44d3 118 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 11 99 1.1E-14 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS00655 0bda2248b91c5914c93eec1bd6fc44d3 118 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 10 91 2.4E-28 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 APT61_RS11405 df16583338ba32b5e2420d399a0fb300 251 SUPERFAMILY SSF100950 74 229 2.72E-25 T 22-04-2016 APT61_RS11405 df16583338ba32b5e2420d399a0fb300 251 SMART SM01134 71 232 4.5E-58 T 22-04-2016 APT61_RS11405 df16583338ba32b5e2420d399a0fb300 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 4.5E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS11405 df16583338ba32b5e2420d399a0fb300 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APT61_RS11405 df16583338ba32b5e2420d399a0fb300 251 Gene3D G3DSA:1.10.10.10 1 55 7.0E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11405 df16583338ba32b5e2420d399a0fb300 251 SUPERFAMILY SSF46785 5 58 1.56E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11405 df16583338ba32b5e2420d399a0fb300 251 SMART SM00420 6 58 9.8E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS11405 df16583338ba32b5e2420d399a0fb300 251 PANTHER PTHR30363 1 251 1.1E-72 T 22-04-2016 APT61_RS11405 df16583338ba32b5e2420d399a0fb300 251 PANTHER PTHR30363:SF14 1 251 1.1E-72 T 22-04-2016 APT61_RS11405 df16583338ba32b5e2420d399a0fb300 251 Gene3D G3DSA:3.40.50.1360 75 211 5.5E-11 T 22-04-2016 APT61_RS11405 df16583338ba32b5e2420d399a0fb300 251 Pfam PF00455 DeoR C terminal sensor domain 75 229 9.8E-41 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APT61_RS11405 df16583338ba32b5e2420d399a0fb300 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 9.3E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS11405 df16583338ba32b5e2420d399a0fb300 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 9.3E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS05870 9b0d58ff5000baaa466bafd5a7e2f314 112 SMART SM00938 4 105 9.0E-68 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APT61_RS05870 9b0d58ff5000baaa466bafd5a7e2f314 112 PRINTS PR00340 P-II protein signature 52 75 2.9E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APT61_RS05870 9b0d58ff5000baaa466bafd5a7e2f314 112 PRINTS PR00340 P-II protein signature 83 103 2.9E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APT61_RS05870 9b0d58ff5000baaa466bafd5a7e2f314 112 PRINTS PR00340 P-II protein signature 23 41 2.9E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APT61_RS05870 9b0d58ff5000baaa466bafd5a7e2f314 112 PRINTS PR00340 P-II protein signature 2 17 2.9E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APT61_RS05870 9b0d58ff5000baaa466bafd5a7e2f314 112 SUPERFAMILY SSF54913 1 112 1.18E-46 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APT61_RS05870 9b0d58ff5000baaa466bafd5a7e2f314 112 PIRSF PIRSF039144 1 112 2.4E-57 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APT61_RS05870 9b0d58ff5000baaa466bafd5a7e2f314 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 APT61_RS05870 9b0d58ff5000baaa466bafd5a7e2f314 112 Gene3D G3DSA:3.30.70.120 1 112 3.5E-51 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APT61_RS05870 9b0d58ff5000baaa466bafd5a7e2f314 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.7E-44 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APT61_RS05870 9b0d58ff5000baaa466bafd5a7e2f314 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 APT61_RS05870 9b0d58ff5000baaa466bafd5a7e2f314 112 PANTHER PTHR30115 1 112 6.0E-68 T 22-04-2016 APT61_RS18190 db6b2fdf9b161aca14ffec718eb78fa7 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 190 39.396 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 APT61_RS18190 db6b2fdf9b161aca14ffec718eb78fa7 198 Gene3D G3DSA:3.30.420.10 11 151 2.9E-48 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS18190 db6b2fdf9b161aca14ffec718eb78fa7 198 SUPERFAMILY SSF53098 3 195 1.97E-70 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS18190 db6b2fdf9b161aca14ffec718eb78fa7 198 Pfam PF01351 Ribonuclease HII 13 188 2.0E-38 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain APT61_RS18190 db6b2fdf9b161aca14ffec718eb78fa7 198 PANTHER PTHR10954 1 197 7.2E-84 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 APT61_RS19125 f0267eab5c8c0a6ef92c1e61a8c4ea0c 322 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 97 315 1.8E-91 T 22-04-2016 APT61_RS19125 f0267eab5c8c0a6ef92c1e61a8c4ea0c 322 SUPERFAMILY SSF56784 111 315 3.12E-47 T 22-04-2016 IPR023214 HAD-like domain APT61_RS19125 f0267eab5c8c0a6ef92c1e61a8c4ea0c 322 Gene3D G3DSA:1.10.150.210 126 175 3.8E-26 T 22-04-2016 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|UniPathway: UPA00135 APT61_RS19125 f0267eab5c8c0a6ef92c1e61a8c4ea0c 322 PANTHER PTHR10000 4 321 8.5E-208 T 22-04-2016 APT61_RS19125 f0267eab5c8c0a6ef92c1e61a8c4ea0c 322 PANTHER PTHR10000:SF7 4 321 8.5E-208 T 22-04-2016 APT61_RS19125 f0267eab5c8c0a6ef92c1e61a8c4ea0c 322 Gene3D G3DSA:3.40.50.1000 176 307 8.8E-38 T 22-04-2016 IPR023214 HAD-like domain APT61_RS19125 f0267eab5c8c0a6ef92c1e61a8c4ea0c 322 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 112 282 2.7E-25 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 APT61_RS19125 f0267eab5c8c0a6ef92c1e61a8c4ea0c 322 Pfam PF12710 haloacid dehalogenase-like hydrolase 149 280 3.0E-16 T 22-04-2016 APT61_RS00515 7e8efeaff79ba5371a6fd394b0187fd5 248 Pfam PF00970 Oxidoreductase FAD-binding domain 18 90 6.7E-7 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APT61_RS00515 7e8efeaff79ba5371a6fd394b0187fd5 248 PANTHER PTHR19370 4 227 7.6E-113 T 22-04-2016 APT61_RS00515 7e8efeaff79ba5371a6fd394b0187fd5 248 SUPERFAMILY SSF63380 3 100 3.4E-24 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APT61_RS00515 7e8efeaff79ba5371a6fd394b0187fd5 248 PANTHER PTHR19370:SF98 4 227 7.6E-113 T 22-04-2016 APT61_RS00515 7e8efeaff79ba5371a6fd394b0187fd5 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 4.9E-19 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APT61_RS00515 7e8efeaff79ba5371a6fd394b0187fd5 248 Gene3D G3DSA:3.40.50.80 97 248 6.2E-47 T 22-04-2016 APT61_RS00515 7e8efeaff79ba5371a6fd394b0187fd5 248 Gene3D G3DSA:2.40.30.10 2 96 4.7E-29 T 22-04-2016 APT61_RS00515 7e8efeaff79ba5371a6fd394b0187fd5 248 SUPERFAMILY SSF52343 104 248 5.11E-38 T 22-04-2016 APT61_RS19380 80493d63b2910f6010324028da3a74ae 587 Gene3D G3DSA:3.30.1950.10 124 188 1.8E-10 T 22-04-2016 APT61_RS19380 80493d63b2910f6010324028da3a74ae 587 Pfam PF02563 Polysaccharide biosynthesis/export protein 117 190 9.3E-14 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 APT61_RS19380 80493d63b2910f6010324028da3a74ae 587 PANTHER PTHR33619:SF1 118 572 9.4E-35 T 22-04-2016 APT61_RS19380 80493d63b2910f6010324028da3a74ae 587 Pfam PF10531 SLBB domain 492 538 4.9E-4 T 22-04-2016 IPR019554 Soluble ligand binding domain APT61_RS19380 80493d63b2910f6010324028da3a74ae 587 PANTHER PTHR33619 118 572 9.4E-35 T 22-04-2016 APT61_RS19380 80493d63b2910f6010324028da3a74ae 587 Gene3D G3DSA:3.10.560.10 360 406 3.5E-4 T 22-04-2016 APT61_RS19380 80493d63b2910f6010324028da3a74ae 587 Gene3D G3DSA:3.10.560.10 483 538 1.4E-8 T 22-04-2016 APT61_RS19380 80493d63b2910f6010324028da3a74ae 587 Gene3D G3DSA:3.10.560.10 189 275 1.1E-14 T 22-04-2016 APT61_RS19380 80493d63b2910f6010324028da3a74ae 587 Gene3D G3DSA:3.10.560.10 455 482 3.5E-4 T 22-04-2016 APT61_RS01675 1d3d1e68a4cdf2a6ab1e71f57f6a7d18 797 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 638 650 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APT61_RS01675 1d3d1e68a4cdf2a6ab1e71f57f6a7d18 797 PIRSF PIRSF000460 1 797 1.7E-200 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APT61_RS01675 1d3d1e68a4cdf2a6ab1e71f57f6a7d18 797 PANTHER PTHR11468 1 793 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APT61_RS01675 1d3d1e68a4cdf2a6ab1e71f57f6a7d18 797 Gene3D G3DSA:3.40.50.2000 463 780 8.7E-135 T 22-04-2016 APT61_RS01675 1d3d1e68a4cdf2a6ab1e71f57f6a7d18 797 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 8 794 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APT61_RS01675 1d3d1e68a4cdf2a6ab1e71f57f6a7d18 797 Gene3D G3DSA:3.40.50.2000 5 462 3.1E-178 T 22-04-2016 APT61_RS01675 1d3d1e68a4cdf2a6ab1e71f57f6a7d18 797 Pfam PF00343 Carbohydrate phosphorylase 93 794 1.1E-302 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APT61_RS01675 1d3d1e68a4cdf2a6ab1e71f57f6a7d18 797 PANTHER PTHR11468:SF10 1 793 0.0 T 22-04-2016 APT61_RS01675 1d3d1e68a4cdf2a6ab1e71f57f6a7d18 797 SUPERFAMILY SSF53756 6 795 4.63E-292 T 22-04-2016 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 Gene3D G3DSA:3.90.550.10 127 360 4.8E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 Pfam PF03552 Cellulose synthase 302 432 1.0E-9 T 22-04-2016 IPR005150 Cellulose synthase GO:0016020|GO:0016760|GO:0030244 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 3 672 3.8E-259 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 Pfam PF00535 Glycosyl transferase family 2 130 301 5.3E-35 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 PANTHER PTHR10587 35 568 1.6E-85 T 22-04-2016 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 PRINTS PR01439 Cellulose synthase subunit A signature 487 511 4.1E-59 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 PRINTS PR01439 Cellulose synthase subunit A signature 136 155 4.1E-59 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 PRINTS PR01439 Cellulose synthase subunit A signature 523 544 4.1E-59 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 PRINTS PR01439 Cellulose synthase subunit A signature 407 426 4.1E-59 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 PRINTS PR01439 Cellulose synthase subunit A signature 447 466 4.1E-59 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 PRINTS PR01439 Cellulose synthase subunit A signature 53 73 4.1E-59 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 PRINTS PR01439 Cellulose synthase subunit A signature 378 404 4.1E-59 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 PRINTS PR01439 Cellulose synthase subunit A signature 217 241 4.1E-59 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 PRINTS PR01439 Cellulose synthase subunit A signature 81 106 4.1E-59 T 22-04-2016 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001|UniPathway: UPA00694 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 SUPERFAMILY SSF53448 111 405 6.14E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 PANTHER PTHR10587:SF94 35 568 1.6E-85 T 22-04-2016 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 SUPERFAMILY SSF141371 551 644 1.1E-6 T 22-04-2016 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 Pfam PF07238 PilZ domain 550 645 5.6E-8 T 22-04-2016 IPR009875 PilZ domain GO:0035438 APT61_RS03190 10d2f69379f4a26970a3655acf6b212f 706 Gene3D G3DSA:2.40.10.220 552 644 9.2E-4 T 22-04-2016 APT61_RS04790 aee95e5a8ef18b2f9ff9cc6c8dcbd4b4 332 SUPERFAMILY SSF53807 20 321 2.67E-42 T 22-04-2016 APT61_RS04790 aee95e5a8ef18b2f9ff9cc6c8dcbd4b4 332 Gene3D G3DSA:3.40.50.1980 40 180 3.2E-13 T 22-04-2016 APT61_RS04790 aee95e5a8ef18b2f9ff9cc6c8dcbd4b4 332 PANTHER PTHR30535 8 324 4.0E-33 T 22-04-2016 APT61_RS04790 aee95e5a8ef18b2f9ff9cc6c8dcbd4b4 332 Pfam PF01497 Periplasmic binding protein 43 307 1.5E-35 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APT61_RS04790 aee95e5a8ef18b2f9ff9cc6c8dcbd4b4 332 Gene3D G3DSA:3.40.50.1980 181 326 6.8E-27 T 22-04-2016 APT61_RS04790 aee95e5a8ef18b2f9ff9cc6c8dcbd4b4 332 PANTHER PTHR30535:SF7 8 324 4.0E-33 T 22-04-2016 APT61_RS19160 f76ec0dd1593d3cca34d2ed94a119fa6 513 SUPERFAMILY SSF51998 21 467 1.13E-86 T 22-04-2016 APT61_RS19160 f76ec0dd1593d3cca34d2ed94a119fa6 513 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 8 501 6.9E-230 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted APT61_RS19160 f76ec0dd1593d3cca34d2ed94a119fa6 513 PIRSF PIRSF028991 3 513 1.4E-267 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted APT61_RS19160 f76ec0dd1593d3cca34d2ed94a119fa6 513 Gene3D G3DSA:3.20.70.20 82 246 9.3E-10 T 22-04-2016 APT61_RS19160 f76ec0dd1593d3cca34d2ed94a119fa6 513 Pfam PF11230 Protein of unknown function (DUF3029) 19 501 1.2E-217 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 Gene3D G3DSA:3.30.230.40 167 254 8.8E-38 T 22-04-2016 APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 Pfam PF13242 HAD-hyrolase-like 103 145 5.0E-7 T 22-04-2016 APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 SUPERFAMILY SSF54211 167 251 4.05E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 145 5.2E-45 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 1.2E-64 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 Gene3D G3DSA:3.40.50.1000 1 159 1.7E-41 T 22-04-2016 IPR023214 HAD-like domain APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 PANTHER PTHR23133:SF2 10 97 5.3E-180 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 PANTHER PTHR23133:SF2 163 355 5.3E-180 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 SUPERFAMILY SSF54211 252 342 6.83E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.608 T 22-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 Gene3D G3DSA:3.30.230.40 258 355 7.7E-32 T 22-04-2016 APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 PANTHER PTHR23133 10 97 5.3E-180 T 22-04-2016 APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 PANTHER PTHR23133 163 355 5.3E-180 T 22-04-2016 APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 SUPERFAMILY SSF56784 1 158 2.62E-38 T 22-04-2016 IPR023214 HAD-like domain APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 149 5.3E-24 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 1.5E-79 T 22-04-2016 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 22-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 APT61_RS07845 93bdad9cfb6111819ce7137ee4e07271 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 57.37 T 22-04-2016 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15|UniPathway: UPA00031|UniPathway: UPA00031 APT61_RS09380 7ea4d125d4669c6545ef1c143ece37b6 137 Gene3D G3DSA:1.10.287.1050 1 58 6.1E-32 T 22-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 APT61_RS09380 7ea4d125d4669c6545ef1c143ece37b6 137 PANTHER PTHR38097 2 137 6.3E-106 T 22-04-2016 APT61_RS09380 7ea4d125d4669c6545ef1c143ece37b6 137 SUPERFAMILY SSF81273 93 136 1.77E-12 T 22-04-2016 APT61_RS09380 7ea4d125d4669c6545ef1c143ece37b6 137 SMART SM00528 87 135 4.7E-26 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APT61_RS09380 7ea4d125d4669c6545ef1c143ece37b6 137 SUPERFAMILY SSF81273 2 58 3.73E-18 T 22-04-2016 APT61_RS09380 7ea4d125d4669c6545ef1c143ece37b6 137 Pfam PF00816 H-NS histone family 32 127 6.3E-21 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 APT61_RS09380 7ea4d125d4669c6545ef1c143ece37b6 137 PIRSF PIRSF002096 1 135 4.8E-57 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 APT61_RS09380 7ea4d125d4669c6545ef1c143ece37b6 137 PANTHER PTHR38097:SF1 2 137 6.3E-106 T 22-04-2016 APT61_RS09380 7ea4d125d4669c6545ef1c143ece37b6 137 Gene3D G3DSA:4.10.430.10 92 136 6.6E-26 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APT61_RS00285 b75b0c507743b065d049a0a58ce568d0 304 Pfam PF04829 Pre-toxin domain with VENN motif 40 88 3.8E-18 T 22-04-2016 IPR006914 VENN motif-containing domain APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 322 634 2.5E-20 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 PANTHER PTHR11938 275 647 0.0 T 22-04-2016 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 PANTHER PTHR11938 1 106 0.0 T 22-04-2016 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 SUPERFAMILY SSF54862 1 156 3.85E-42 T 22-04-2016 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 SUPERFAMILY SSF54862 190 290 3.85E-42 T 22-04-2016 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 Pfam PF13247 4Fe-4S dicluster domain 55 137 3.1E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 198 309 5.2E-36 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 182 647 4.4E-246 T 22-04-2016 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 PRINTS PR00419 Adrenodoxin reductase family signature 465 479 1.5E-37 T 22-04-2016 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 PRINTS PR00419 Adrenodoxin reductase family signature 346 359 1.5E-37 T 22-04-2016 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 PRINTS PR00419 Adrenodoxin reductase family signature 499 512 1.5E-37 T 22-04-2016 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 PRINTS PR00419 Adrenodoxin reductase family signature 388 398 1.5E-37 T 22-04-2016 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 PRINTS PR00419 Adrenodoxin reductase family signature 323 345 1.5E-37 T 22-04-2016 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 Gene3D G3DSA:3.40.50.720 325 566 1.3E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 Gene3D G3DSA:1.10.1060.10 185 324 4.9E-43 T 22-04-2016 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 Gene3D G3DSA:3.40.50.720 567 644 4.2E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 SUPERFAMILY SSF51971 321 576 2.18E-67 T 22-04-2016 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 Gene3D G3DSA:3.30.70.20 5 162 4.2E-26 T 22-04-2016 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 PANTHER PTHR11938:SF89 275 647 0.0 T 22-04-2016 APT61_RS06245 94ff84065873bf111ad947bede382bf2 653 PANTHER PTHR11938:SF89 1 106 0.0 T 22-04-2016 APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 3.0E-160 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 PIRSF PIRSF000130 1 488 1.8E-194 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 Gene3D G3DSA:3.20.20.70 2 485 3.8E-191 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 SMART SM01240 7 473 0.0 T 22-04-2016 APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 SUPERFAMILY SSF54631 94 203 6.82E-24 T 22-04-2016 APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 PANTHER PTHR11911:SF6 1 281 4.2E-247 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 PANTHER PTHR11911:SF6 299 486 4.2E-247 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.1E-196 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 PANTHER PTHR11911 1 281 4.2E-247 T 22-04-2016 APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 PANTHER PTHR11911 299 486 4.2E-247 T 22-04-2016 APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 83.999 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 Pfam PF00571 CBS domain 153 202 0.0012 T 22-04-2016 IPR000644 CBS domain APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 Pfam PF00571 CBS domain 95 140 6.4E-8 T 22-04-2016 IPR000644 CBS domain APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 SMART SM00116 96 144 6.0E-10 T 22-04-2016 IPR000644 CBS domain APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 SMART SM00116 158 206 2.2E-7 T 22-04-2016 IPR000644 CBS domain APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 SUPERFAMILY SSF51412 217 477 5.49E-124 T 22-04-2016 APT61_RS06075 69bb71ec5f8aed794a70c7036c35dfe9 488 SUPERFAMILY SSF51412 1 90 5.49E-124 T 22-04-2016 APT61_RS03355 07f240c2a463c7a97c51efe7d1d22957 148 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 3 141 5.0E-36 T 22-04-2016 IPR006522 Phage virion morphogensis protein APT61_RS03355 07f240c2a463c7a97c51efe7d1d22957 148 Pfam PF05069 Phage virion morphogenesis family 3 146 3.7E-40 T 22-04-2016 IPR006522 Phage virion morphogensis protein APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 Gene3D G3DSA:3.30.540.10 2 192 1.7E-78 T 22-04-2016 APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 268 280 - T 22-04-2016 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474 APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 3.0E-69 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 3.0E-69 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 146 169 3.0E-69 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 177 200 3.0E-69 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 203 230 3.0E-69 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 302 327 3.0E-69 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 PIRSF PIRSF000904 1 331 4.7E-120 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 PIRSF PIRSF500210 1 330 8.1E-124 T 22-04-2016 IPR028343 Fructose-1,6-bisphosphatase KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 192 4.2E-83 T 22-04-2016 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 PANTHER PTHR11556 1 329 3.3E-184 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 SUPERFAMILY SSF56655 2 326 9.69E-112 T 22-04-2016 APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 Gene3D G3DSA:3.40.190.80 194 328 8.3E-57 T 22-04-2016 APT61_RS20035 ed53f3af2c8c060b17956bd39c119fc5 332 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 328 41.579 T 22-04-2016 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0042132|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: REACT_474|UniPathway: UPA00138 APT61_RS18805 fe08370d29a1bd7af198dc2a8cbbc688 551 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 6.5E-42 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain APT61_RS18805 fe08370d29a1bd7af198dc2a8cbbc688 551 PANTHER PTHR30290:SF30 119 550 1.4E-190 T 22-04-2016 APT61_RS18805 fe08370d29a1bd7af198dc2a8cbbc688 551 PANTHER PTHR30290:SF30 22 81 1.4E-190 T 22-04-2016 APT61_RS18805 fe08370d29a1bd7af198dc2a8cbbc688 551 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 166 308 1.3E-17 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS18805 fe08370d29a1bd7af198dc2a8cbbc688 551 SUPERFAMILY SSF53850 117 548 4.34E-64 T 22-04-2016 APT61_RS18805 fe08370d29a1bd7af198dc2a8cbbc688 551 Gene3D G3DSA:3.90.76.10 131 266 9.2E-23 T 22-04-2016 APT61_RS18805 fe08370d29a1bd7af198dc2a8cbbc688 551 PANTHER PTHR30290 119 550 1.4E-190 T 22-04-2016 APT61_RS18805 fe08370d29a1bd7af198dc2a8cbbc688 551 PANTHER PTHR30290 22 81 1.4E-190 T 22-04-2016 APT61_RS18805 fe08370d29a1bd7af198dc2a8cbbc688 551 Gene3D G3DSA:3.40.190.10 267 309 4.5E-7 T 22-04-2016 APT61_RS18805 fe08370d29a1bd7af198dc2a8cbbc688 551 Gene3D G3DSA:1.10.10.10 24 95 3.3E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS09455 e9a6abe73627ef53d2247db15310eb79 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 4.0E-73 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 APT61_RS09455 e9a6abe73627ef53d2247db15310eb79 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.186 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 APT61_RS09455 e9a6abe73627ef53d2247db15310eb79 179 Pfam PF04279 Intracellular septation protein A 1 175 1.5E-71 T 22-04-2016 IPR006008 Intracellular septation protein A GO:0016021 APT61_RS09455 e9a6abe73627ef53d2247db15310eb79 179 PANTHER PTHR36917:SF1 1 178 1.5E-80 T 22-04-2016 APT61_RS09455 e9a6abe73627ef53d2247db15310eb79 179 PANTHER PTHR36917 1 178 1.5E-80 T 22-04-2016 APT61_RS02145 68ea10a2754e2057ab9fc87269a81722 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 5.2E-31 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 APT61_RS02145 68ea10a2754e2057ab9fc87269a81722 166 PANTHER PTHR13718 10 164 2.5E-82 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 APT61_RS02145 68ea10a2754e2057ab9fc87269a81722 166 SUPERFAMILY SSF54768 9 75 5.02E-24 T 22-04-2016 APT61_RS02145 68ea10a2754e2057ab9fc87269a81722 166 Gene3D G3DSA:3.30.160.20 10 72 6.9E-31 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain APT61_RS02145 68ea10a2754e2057ab9fc87269a81722 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site APT61_RS02145 68ea10a2754e2057ab9fc87269a81722 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 1.1E-71 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APT61_RS02145 68ea10a2754e2057ab9fc87269a81722 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 35.03 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 APT61_RS02145 68ea10a2754e2057ab9fc87269a81722 166 SUPERFAMILY SSF54211 79 159 1.77E-27 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS02145 68ea10a2754e2057ab9fc87269a81722 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.5E-29 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 APT61_RS02145 68ea10a2754e2057ab9fc87269a81722 166 Gene3D G3DSA:3.30.230.10 77 159 5.9E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 SUPERFAMILY SSF46689 388 438 3.64E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 SUPERFAMILY SSF52172 6 181 1.99E-42 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 SMART SM00382 157 300 5.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 Gene3D G3DSA:1.10.8.60 310 386 1.4E-21 T 22-04-2016 APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 SUPERFAMILY SSF52540 137 381 3.33E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 PANTHER PTHR32071:SF5 1 445 5.0E-254 T 22-04-2016 APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 Gene3D G3DSA:3.40.50.2300 3 125 3.4E-36 T 22-04-2016 APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 Pfam PF00158 Sigma-54 interaction domain 137 303 5.5E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 Pfam PF00072 Response regulator receiver domain 10 118 1.1E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 Gene3D G3DSA:3.40.50.300 135 308 5.2E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 SMART SM00448 7 118 1.6E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 Gene3D G3DSA:1.10.10.60 391 438 7.9E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS05865 46bee3e7e1278f006f2d95b4f99b4f57 445 PANTHER PTHR32071 1 445 5.0E-254 T 22-04-2016 APT61_RS08325 9f7bc2cd26587698730464ffbd967145 165 Gene3D G3DSA:1.20.1260.10 1 160 7.0E-58 T 22-04-2016 IPR012347 Ferritin-related APT61_RS08325 9f7bc2cd26587698730464ffbd967145 165 PANTHER PTHR11431 5 164 3.8E-45 T 22-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 APT61_RS08325 9f7bc2cd26587698730464ffbd967145 165 Pfam PF00210 Ferritin-like domain 7 143 2.0E-36 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APT61_RS08325 9f7bc2cd26587698730464ffbd967145 165 PANTHER PTHR11431:SF4 5 164 3.8E-45 T 22-04-2016 APT61_RS08325 9f7bc2cd26587698730464ffbd967145 165 SUPERFAMILY SSF47240 4 161 1.09E-55 T 22-04-2016 IPR009078 Ferritin-like superfamily APT61_RS12050 ba323809a8ea84279d7bbefbb4d21d79 274 Pfam PF00089 Trypsin 49 245 2.2E-8 T 22-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 APT61_RS12050 ba323809a8ea84279d7bbefbb4d21d79 274 SUPERFAMILY SSF50494 114 270 1.2E-27 T 22-04-2016 IPR009003 Peptidase S1, PA clan APT61_RS12050 ba323809a8ea84279d7bbefbb4d21d79 274 SUPERFAMILY SSF50494 34 86 1.2E-27 T 22-04-2016 IPR009003 Peptidase S1, PA clan APT61_RS12050 ba323809a8ea84279d7bbefbb4d21d79 274 Gene3D G3DSA:2.40.10.10 55 167 1.1E-11 T 22-04-2016 APT61_RS12050 ba323809a8ea84279d7bbefbb4d21d79 274 Gene3D G3DSA:2.40.10.10 180 245 3.0E-8 T 22-04-2016 APT61_RS12050 ba323809a8ea84279d7bbefbb4d21d79 274 PRINTS PR00839 V8 serine protease family signature 213 229 1.655855E-19 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 APT61_RS12050 ba323809a8ea84279d7bbefbb4d21d79 274 PRINTS PR00839 V8 serine protease family signature 70 87 1.655855E-19 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 APT61_RS12050 ba323809a8ea84279d7bbefbb4d21d79 274 PRINTS PR00839 V8 serine protease family signature 233 245 1.655855E-19 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 APT61_RS12050 ba323809a8ea84279d7bbefbb4d21d79 274 PRINTS PR00839 V8 serine protease family signature 45 62 1.655855E-19 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 APT61_RS12050 ba323809a8ea84279d7bbefbb4d21d79 274 PRINTS PR00839 V8 serine protease family signature 179 192 1.655855E-19 T 22-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 APT61_RS12050 ba323809a8ea84279d7bbefbb4d21d79 274 PANTHER PTHR15462 25 262 6.1E-55 T 22-04-2016 APT61_RS12050 ba323809a8ea84279d7bbefbb4d21d79 274 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 81 86 - T 22-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 APT61_RS12050 ba323809a8ea84279d7bbefbb4d21d79 274 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 218 229 - T 22-04-2016 IPR033116 Serine proteases, trypsin family, serine active site APT61_RS13020 d1b3877764f7cc1756e6e6f63d4af279 327 PANTHER PTHR11538 4 15 1.4E-121 T 22-04-2016 APT61_RS13020 d1b3877764f7cc1756e6e6f63d4af279 327 PANTHER PTHR11538 90 327 1.4E-121 T 22-04-2016 APT61_RS13020 d1b3877764f7cc1756e6e6f63d4af279 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.4E-26 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APT61_RS13020 d1b3877764f7cc1756e6e6f63d4af279 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 9.9E-119 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 APT61_RS13020 d1b3877764f7cc1756e6e6f63d4af279 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.971 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 APT61_RS13020 d1b3877764f7cc1756e6e6f63d4af279 327 SUPERFAMILY SSF55681 92 327 5.8E-82 T 22-04-2016 APT61_RS13020 d1b3877764f7cc1756e6e6f63d4af279 327 Gene3D G3DSA:3.30.930.10 10 327 1.4E-134 T 22-04-2016 APT61_RS13020 d1b3877764f7cc1756e6e6f63d4af279 327 SUPERFAMILY SSF46589 13 99 7.32E-23 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APT61_RS13020 d1b3877764f7cc1756e6e6f63d4af279 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 2.3E-107 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 APT61_RS19790 5477773a385fdd0582129d6c60333990 337 Pfam PF13395 HNH endonuclease 212 271 3.9E-12 T 22-04-2016 IPR003615 HNH nuclease APT61_RS10165 6e1ca21c9d223dad9ea3b2d0af2c9f0d 459 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 455 1.3E-112 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APT61_RS10165 6e1ca21c9d223dad9ea3b2d0af2c9f0d 459 Gene3D G3DSA:1.20.1600.10 342 456 4.2E-99 T 22-04-2016 APT61_RS10165 6e1ca21c9d223dad9ea3b2d0af2c9f0d 459 Gene3D G3DSA:1.20.1600.10 48 85 4.2E-99 T 22-04-2016 APT61_RS10165 6e1ca21c9d223dad9ea3b2d0af2c9f0d 459 Gene3D G3DSA:1.20.1600.10 134 304 4.2E-99 T 22-04-2016 APT61_RS10165 6e1ca21c9d223dad9ea3b2d0af2c9f0d 459 Gene3D G3DSA:2.20.200.10 95 133 1.5E-10 T 22-04-2016 APT61_RS10165 6e1ca21c9d223dad9ea3b2d0af2c9f0d 459 Gene3D G3DSA:2.20.200.10 305 340 1.5E-10 T 22-04-2016 APT61_RS10165 6e1ca21c9d223dad9ea3b2d0af2c9f0d 459 PANTHER PTHR30203:SF3 1 457 1.3E-98 T 22-04-2016 APT61_RS10165 6e1ca21c9d223dad9ea3b2d0af2c9f0d 459 SUPERFAMILY SSF56954 1 456 2.62E-103 T 22-04-2016 APT61_RS10165 6e1ca21c9d223dad9ea3b2d0af2c9f0d 459 PANTHER PTHR30203 1 457 1.3E-98 T 22-04-2016 APT61_RS10165 6e1ca21c9d223dad9ea3b2d0af2c9f0d 459 Pfam PF02321 Outer membrane efflux protein 59 246 3.0E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APT61_RS10165 6e1ca21c9d223dad9ea3b2d0af2c9f0d 459 Pfam PF02321 Outer membrane efflux protein 268 453 2.1E-22 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APT61_RS07520 14e3ae446328abcac3db473152451aac 345 Gene3D G3DSA:1.10.3720.10 99 172 3.3E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07520 14e3ae446328abcac3db473152451aac 345 Gene3D G3DSA:1.10.3720.10 211 341 3.3E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07520 14e3ae446328abcac3db473152451aac 345 PANTHER PTHR30465:SF0 17 176 3.8E-105 T 22-04-2016 APT61_RS07520 14e3ae446328abcac3db473152451aac 345 PANTHER PTHR30465:SF0 202 345 3.8E-105 T 22-04-2016 APT61_RS07520 14e3ae446328abcac3db473152451aac 345 SUPERFAMILY SSF161098 100 169 9.97E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07520 14e3ae446328abcac3db473152451aac 345 SUPERFAMILY SSF161098 208 330 9.97E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07520 14e3ae446328abcac3db473152451aac 345 PANTHER PTHR30465 17 176 3.8E-105 T 22-04-2016 APT61_RS07520 14e3ae446328abcac3db473152451aac 345 PANTHER PTHR30465 202 345 3.8E-105 T 22-04-2016 APT61_RS07520 14e3ae446328abcac3db473152451aac 345 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 344 2.4E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS17975 0d67f698fad48b17abe701138b993f0b 212 PANTHER PTHR30586 6 212 4.9E-140 T 22-04-2016 APT61_RS17975 0d67f698fad48b17abe701138b993f0b 212 PIRSF PIRSF006102 7 212 1.0E-67 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APT61_RS17975 0d67f698fad48b17abe701138b993f0b 212 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 5 210 35.963 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 APT61_RS17975 0d67f698fad48b17abe701138b993f0b 212 PANTHER PTHR30586:SF1 6 212 4.9E-140 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 APT61_RS17975 0d67f698fad48b17abe701138b993f0b 212 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 8 210 4.3E-102 T 22-04-2016 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 APT61_RS17975 0d67f698fad48b17abe701138b993f0b 212 Pfam PF02508 Rnf-Nqr subunit, membrane protein 12 198 1.9E-59 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APT61_RS02335 3818511885663de98f2594408629adab 693 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 257 419 7.6E-41 T 22-04-2016 IPR000160 GGDEF domain APT61_RS02335 3818511885663de98f2594408629adab 693 SUPERFAMILY SSF55073 266 423 4.79E-47 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS02335 3818511885663de98f2594408629adab 693 SMART SM00267 250 421 6.8E-56 T 22-04-2016 IPR000160 GGDEF domain APT61_RS02335 3818511885663de98f2594408629adab 693 Pfam PF00563 EAL domain 441 672 1.6E-70 T 22-04-2016 IPR001633 EAL domain APT61_RS02335 3818511885663de98f2594408629adab 693 Pfam PF00990 Diguanylate cyclase, GGDEF domain 261 416 2.1E-43 T 22-04-2016 IPR000160 GGDEF domain APT61_RS02335 3818511885663de98f2594408629adab 693 Pfam PF03707 Bacterial signalling protein N terminal repeat 182 244 2.8E-10 T 22-04-2016 IPR005330 MHYT domain APT61_RS02335 3818511885663de98f2594408629adab 693 Pfam PF03707 Bacterial signalling protein N terminal repeat 115 171 9.3E-17 T 22-04-2016 IPR005330 MHYT domain APT61_RS02335 3818511885663de98f2594408629adab 693 Pfam PF03707 Bacterial signalling protein N terminal repeat 52 110 9.7E-20 T 22-04-2016 IPR005330 MHYT domain APT61_RS02335 3818511885663de98f2594408629adab 693 PANTHER PTHR10799 83 230 1.4E-76 T 22-04-2016 APT61_RS02335 3818511885663de98f2594408629adab 693 PANTHER PTHR10799 294 531 1.4E-76 T 22-04-2016 APT61_RS02335 3818511885663de98f2594408629adab 693 Gene3D G3DSA:3.30.70.270 263 427 1.3E-53 T 22-04-2016 APT61_RS02335 3818511885663de98f2594408629adab 693 PANTHER PTHR10799:SF774 83 230 1.4E-76 T 22-04-2016 APT61_RS02335 3818511885663de98f2594408629adab 693 PANTHER PTHR10799:SF774 294 531 1.4E-76 T 22-04-2016 APT61_RS02335 3818511885663de98f2594408629adab 693 SMART SM00052 431 677 7.6E-112 T 22-04-2016 IPR001633 EAL domain APT61_RS02335 3818511885663de98f2594408629adab 693 Gene3D G3DSA:3.20.20.450 434 683 1.5E-93 T 22-04-2016 IPR001633 EAL domain APT61_RS02335 3818511885663de98f2594408629adab 693 SUPERFAMILY SSF141868 436 683 6.41E-86 T 22-04-2016 IPR001633 EAL domain APT61_RS21900 7cbf9800b22384860ec62bdb8299ade3 101 PIRSF PIRSF000699 1 101 1.7E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS21900 7cbf9800b22384860ec62bdb8299ade3 101 SUPERFAMILY SSF46973 1 101 2.48E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS21900 7cbf9800b22384860ec62bdb8299ade3 101 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 8 100 2.5E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS21900 7cbf9800b22384860ec62bdb8299ade3 101 Gene3D G3DSA:1.20.58.80 2 101 1.1E-38 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS21900 7cbf9800b22384860ec62bdb8299ade3 101 PANTHER PTHR34382:SF2 1 101 1.4E-37 T 22-04-2016 APT61_RS21900 7cbf9800b22384860ec62bdb8299ade3 101 PANTHER PTHR34382 1 101 1.4E-37 T 22-04-2016 APT61_RS10565 eb5b03b3fed00949a077b7a2169f9e07 334 PANTHER PTHR37955:SF1 2 333 1.6E-98 T 22-04-2016 APT61_RS10565 eb5b03b3fed00949a077b7a2169f9e07 334 PANTHER PTHR37955 2 333 1.6E-98 T 22-04-2016 APT61_RS10565 eb5b03b3fed00949a077b7a2169f9e07 334 TIGRFAM TIGR00816 tdt: C4-dicarboxylate transporter/malic acid transport protein 13 316 5.9E-101 T 22-04-2016 IPR011552 Tellurite resistance protein TehA/malic acid transport protein GO:0016021 APT61_RS10565 eb5b03b3fed00949a077b7a2169f9e07 334 Pfam PF03595 Voltage-dependent anion channel 12 309 8.0E-40 T 22-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 APT61_RS07445 1e12156602af1fa1c0664d3da7b5d9c9 460 PANTHER PTHR11986 17 460 3.8E-176 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS07445 1e12156602af1fa1c0664d3da7b5d9c9 460 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 262 299 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS07445 1e12156602af1fa1c0664d3da7b5d9c9 460 Pfam PF00202 Aminotransferase class-III 40 452 3.2E-103 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS07445 1e12156602af1fa1c0664d3da7b5d9c9 460 Gene3D G3DSA:3.40.640.10 78 326 3.5E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS07445 1e12156602af1fa1c0664d3da7b5d9c9 460 PANTHER PTHR11986:SF7 17 460 3.8E-176 T 22-04-2016 APT61_RS07445 1e12156602af1fa1c0664d3da7b5d9c9 460 SUPERFAMILY SSF53383 30 452 1.24E-125 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS07445 1e12156602af1fa1c0664d3da7b5d9c9 460 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 21 454 4.4E-213 T 22-04-2016 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|UniPathway: UPA00067 APT61_RS07445 1e12156602af1fa1c0664d3da7b5d9c9 460 Gene3D G3DSA:3.90.1150.10 327 453 2.2E-43 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS20855 9a8ab60f42e92c37a3ed0aa0a18670c5 464 Pfam PF00990 Diguanylate cyclase, GGDEF domain 297 455 2.8E-36 T 22-04-2016 IPR000160 GGDEF domain APT61_RS20855 9a8ab60f42e92c37a3ed0aa0a18670c5 464 SUPERFAMILY SSF55785 165 284 4.76E-11 T 22-04-2016 IPR000014 PAS domain APT61_RS20855 9a8ab60f42e92c37a3ed0aa0a18670c5 464 SMART SM00267 286 460 2.6E-43 T 22-04-2016 IPR000160 GGDEF domain APT61_RS20855 9a8ab60f42e92c37a3ed0aa0a18670c5 464 PANTHER PTHR10799 332 454 8.5E-20 T 22-04-2016 APT61_RS20855 9a8ab60f42e92c37a3ed0aa0a18670c5 464 PANTHER PTHR10799 146 293 8.5E-20 T 22-04-2016 APT61_RS20855 9a8ab60f42e92c37a3ed0aa0a18670c5 464 Gene3D G3DSA:3.30.450.20 169 286 2.9E-10 T 22-04-2016 APT61_RS20855 9a8ab60f42e92c37a3ed0aa0a18670c5 464 PANTHER PTHR10799:SF750 332 454 8.5E-20 T 22-04-2016 APT61_RS20855 9a8ab60f42e92c37a3ed0aa0a18670c5 464 PANTHER PTHR10799:SF750 146 293 8.5E-20 T 22-04-2016 APT61_RS20855 9a8ab60f42e92c37a3ed0aa0a18670c5 464 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 177 292 1.5E-9 T 22-04-2016 IPR000014 PAS domain APT61_RS20855 9a8ab60f42e92c37a3ed0aa0a18670c5 464 SUPERFAMILY SSF55073 302 458 7.85E-39 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS20855 9a8ab60f42e92c37a3ed0aa0a18670c5 464 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 293 459 4.8E-40 T 22-04-2016 IPR000160 GGDEF domain APT61_RS20855 9a8ab60f42e92c37a3ed0aa0a18670c5 464 Gene3D G3DSA:3.30.70.270 299 459 5.3E-43 T 22-04-2016 APT61_RS14580 41bc43879e9d899c88055e54f37c67d4 364 SUPERFAMILY SSF53822 95 361 3.0E-36 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS14580 41bc43879e9d899c88055e54f37c67d4 364 Gene3D G3DSA:3.40.50.2300 81 199 4.9E-24 T 22-04-2016 APT61_RS14580 41bc43879e9d899c88055e54f37c67d4 364 ProSitePatterns PS00356 LacI-type HTH domain signature. 34 52 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS14580 41bc43879e9d899c88055e54f37c67d4 364 Gene3D G3DSA:3.40.50.2300 200 360 4.1E-32 T 22-04-2016 APT61_RS14580 41bc43879e9d899c88055e54f37c67d4 364 PANTHER PTHR30146:SF33 31 359 8.3E-88 T 22-04-2016 APT61_RS14580 41bc43879e9d899c88055e54f37c67d4 364 SUPERFAMILY SSF47413 31 89 6.09E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS14580 41bc43879e9d899c88055e54f37c67d4 364 Pfam PF13377 Periplasmic binding protein-like domain 198 358 7.9E-25 T 22-04-2016 APT61_RS14580 41bc43879e9d899c88055e54f37c67d4 364 SMART SM00354 31 101 1.3E-23 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS14580 41bc43879e9d899c88055e54f37c67d4 364 Pfam PF00356 Bacterial regulatory proteins, lacI family 33 78 1.3E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS14580 41bc43879e9d899c88055e54f37c67d4 364 Gene3D G3DSA:1.10.260.40 31 80 4.8E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS14580 41bc43879e9d899c88055e54f37c67d4 364 PANTHER PTHR30146 31 359 8.3E-88 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 Pfam PF00012 Hsp70 protein 130 229 3.7E-9 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 Pfam PF00012 Hsp70 protein 331 421 3.3E-5 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 PANTHER PTHR19375 322 442 4.2E-138 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 PANTHER PTHR19375 2 44 4.2E-138 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 PANTHER PTHR19375 85 269 4.2E-138 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 SUPERFAMILY SSF53067 208 276 5.37E-29 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 SUPERFAMILY SSF53067 328 447 5.37E-29 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 Gene3D G3DSA:3.30.420.40 85 217 4.6E-30 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 Gene3D G3DSA:3.30.420.40 2 43 4.6E-30 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 PANTHER PTHR19375:SF182 322 442 4.2E-138 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 PANTHER PTHR19375:SF182 2 44 4.2E-138 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 PANTHER PTHR19375:SF182 85 269 4.2E-138 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 SUPERFAMILY SSF53067 85 204 7.45E-26 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 SUPERFAMILY SSF53067 2 44 7.45E-26 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 Gene3D G3DSA:3.30.420.40 374 433 3.4E-14 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 Gene3D G3DSA:3.30.420.40 218 241 3.4E-14 T 22-04-2016 APT61_RS07620 091c903a0e0393e03c5cb29aaa19dd6a 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site APT61_RS11695 9e38eb9220dfdfb76d6ada3452838a49 143 PRINTS PR01438 Universal stress protein signature 2 20 1.9E-13 T 22-04-2016 IPR006015 Universal stress protein A APT61_RS11695 9e38eb9220dfdfb76d6ada3452838a49 143 PRINTS PR01438 Universal stress protein signature 121 143 1.9E-13 T 22-04-2016 IPR006015 Universal stress protein A APT61_RS11695 9e38eb9220dfdfb76d6ada3452838a49 143 PRINTS PR01438 Universal stress protein signature 104 116 1.9E-13 T 22-04-2016 IPR006015 Universal stress protein A APT61_RS11695 9e38eb9220dfdfb76d6ada3452838a49 143 Gene3D G3DSA:3.40.50.620 2 143 8.0E-31 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS11695 9e38eb9220dfdfb76d6ada3452838a49 143 Pfam PF00582 Universal stress protein family 1 143 1.3E-27 T 22-04-2016 IPR006016 UspA GO:0006950 APT61_RS11695 9e38eb9220dfdfb76d6ada3452838a49 143 PANTHER PTHR31964 1 143 7.7E-45 T 22-04-2016 APT61_RS11695 9e38eb9220dfdfb76d6ada3452838a49 143 SUPERFAMILY SSF52402 1 143 8.2E-29 T 22-04-2016 APT61_RS11695 9e38eb9220dfdfb76d6ada3452838a49 143 PANTHER PTHR31964:SF48 1 143 7.7E-45 T 22-04-2016 APT61_RS21615 bbf2a9c2237b1a8f1a8ce9e8954b6fc5 328 SUPERFAMILY SSF53756 1 322 7.38E-71 T 22-04-2016 APT61_RS21615 bbf2a9c2237b1a8f1a8ce9e8954b6fc5 328 Gene3D G3DSA:3.40.50.2000 170 322 5.9E-36 T 22-04-2016 APT61_RS21615 bbf2a9c2237b1a8f1a8ce9e8954b6fc5 328 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 319 5.8E-128 T 22-04-2016 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 APT61_RS21615 bbf2a9c2237b1a8f1a8ce9e8954b6fc5 328 PANTHER PTHR30160 1 298 3.4E-156 T 22-04-2016 APT61_RS21615 bbf2a9c2237b1a8f1a8ce9e8954b6fc5 328 PANTHER PTHR30160:SF8 1 298 3.4E-156 T 22-04-2016 APT61_RS21615 bbf2a9c2237b1a8f1a8ce9e8954b6fc5 328 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 306 1.8E-75 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APT61_RS21615 bbf2a9c2237b1a8f1a8ce9e8954b6fc5 328 Gene3D G3DSA:3.40.50.2000 1 158 3.6E-30 T 22-04-2016 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 1.7E-153 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 Gene3D G3DSA:1.10.268.10 363 496 9.5E-50 T 22-04-2016 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 SUPERFAMILY SSF101904 533 850 1.7E-112 T 22-04-2016 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 Gene3D G3DSA:3.30.1360.40 236 333 1.1E-38 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 Gene3D G3DSA:3.90.199.10 34 216 7.3E-84 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 PANTHER PTHR10169:SF48 450 809 0.0 T 22-04-2016 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 PANTHER PTHR10169:SF48 2 418 0.0 T 22-04-2016 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 SMART SM00434 11 499 4.0E-301 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 Gene3D G3DSA:2.120.10.90 531 839 7.9E-143 T 22-04-2016 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 845 30.304 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 1.9E-15 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 7.9E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 6.1E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 9.0E-10 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 789 1.3E-13 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 1.6E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 SUPERFAMILY SSF56719 30 521 5.62E-183 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 PANTHER PTHR10169 450 809 0.0 T 22-04-2016 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 PANTHER PTHR10169 2 418 0.0 T 22-04-2016 APT61_RS07000 9d49233dbbcca8147523182c9b9dfbe8 878 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 APT61_RS13955 d9b13807b95f623a073f554a186a156b 334 PANTHER PTHR11669:SF8 11 320 6.8E-111 T 22-04-2016 APT61_RS13955 d9b13807b95f623a073f554a186a156b 334 Gene3D G3DSA:1.20.272.10 211 327 7.3E-42 T 22-04-2016 APT61_RS13955 d9b13807b95f623a073f554a186a156b 334 SUPERFAMILY SSF48019 211 328 3.06E-31 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APT61_RS13955 d9b13807b95f623a073f554a186a156b 334 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 201 5.3E-60 T 22-04-2016 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS13955 d9b13807b95f623a073f554a186a156b 334 SUPERFAMILY SSF52540 1 206 4.04E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13955 d9b13807b95f623a073f554a186a156b 334 Gene3D G3DSA:3.40.50.300 5 165 3.4E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13955 d9b13807b95f623a073f554a186a156b 334 PANTHER PTHR11669 11 320 6.8E-111 T 22-04-2016 APT61_RS13955 d9b13807b95f623a073f554a186a156b 334 Gene3D G3DSA:1.10.8.10 169 206 1.0E-17 T 22-04-2016 APT61_RS13955 d9b13807b95f623a073f554a186a156b 334 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 211 320 3.9E-32 T 22-04-2016 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS13955 d9b13807b95f623a073f554a186a156b 334 Pfam PF13177 DNA polymerase III, delta subunit 11 165 3.5E-41 T 22-04-2016 APT61_RS14345 14181682b6bebd3006ea30e7f795ab6c 375 Pfam PF09375 Imelysin 135 367 2.3E-43 T 22-04-2016 APT61_RS14345 14181682b6bebd3006ea30e7f795ab6c 375 SUPERFAMILY SSF49503 16 116 8.11E-6 T 22-04-2016 IPR008972 Cupredoxin APT61_RS14345 14181682b6bebd3006ea30e7f795ab6c 375 Pfam PF13473 Cupredoxin-like domain 14 115 3.8E-25 T 22-04-2016 IPR028096 EfeO-type cupredoxin-like domain APT61_RS14345 14181682b6bebd3006ea30e7f795ab6c 375 Gene3D G3DSA:2.60.40.420 15 116 1.9E-6 T 22-04-2016 IPR008972 Cupredoxin APT61_RS14345 14181682b6bebd3006ea30e7f795ab6c 375 PANTHER PTHR39192 1 375 1.0E-162 T 22-04-2016 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 322 372 7.0E-15 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.6E-8 T 22-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 Gene3D G3DSA:3.40.50.10050 697 776 2.6E-24 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 Gene3D G3DSA:2.40.30.10 570 661 3.0E-20 T 22-04-2016 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 57 95 6.7E-15 T 22-04-2016 IPR013575 Initiation factor 2 associated domain, bacterial APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 SUPERFAMILY SSF46955 3 50 6.77E-13 T 22-04-2016 IPR009061 Putative DNA-binding domain APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 Pfam PF11987 Translation-initiation factor 2 682 787 1.1E-36 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 895 17.556 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 Gene3D G3DSA:3.40.50.300 397 557 2.4E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 PANTHER PTHR23115:SF184 375 725 6.4E-215 T 22-04-2016 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 PANTHER PTHR23115:SF184 750 898 6.4E-215 T 22-04-2016 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 314 897 5.0E-295 T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 SUPERFAMILY SSF52156 675 804 1.31E-37 T 22-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 SUPERFAMILY SSF50447 799 895 1.02E-33 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 SUPERFAMILY SSF50447 570 652 2.04E-22 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 401 556 3.3E-33 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 ProSitePatterns PS01176 Initiation factor 2 signature. 848 870 - T 22-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 Gene3D G3DSA:2.40.30.10 799 896 1.2E-39 T 22-04-2016 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 Pfam PF00009 Elongation factor Tu GTP binding domain 402 558 8.1E-35 T 22-04-2016 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 SUPERFAMILY SSF52540 397 565 1.58E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 Gene3D G3DSA:3.30.56.50 2 50 2.1E-24 T 22-04-2016 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 PANTHER PTHR23115 375 725 6.4E-215 T 22-04-2016 APT61_RS02815 a61bbcd7c5b1aada7dfeb70b3334658b 898 PANTHER PTHR23115 750 898 6.4E-215 T 22-04-2016 APT61_RS10685 7b9e79ba56187c56a59dcd0facadaa9e 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 248 8.5E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10685 7b9e79ba56187c56a59dcd0facadaa9e 268 Gene3D G3DSA:1.10.3720.10 9 260 2.1E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10685 7b9e79ba56187c56a59dcd0facadaa9e 268 SUPERFAMILY SSF161098 5 261 6.41E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10685 7b9e79ba56187c56a59dcd0facadaa9e 268 PANTHER PTHR30193 1 268 9.1E-82 T 22-04-2016 APT61_RS10685 7b9e79ba56187c56a59dcd0facadaa9e 268 PANTHER PTHR30193:SF20 1 268 9.1E-82 T 22-04-2016 APT61_RS13025 ed657660b5c787291c6f32d7472b24a4 118 PANTHER PTHR10986 2 117 4.7E-68 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APT61_RS13025 ed657660b5c787291c6f32d7472b24a4 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APT61_RS13025 ed657660b5c787291c6f32d7472b24a4 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APT61_RS13025 ed657660b5c787291c6f32d7472b24a4 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APT61_RS13025 ed657660b5c787291c6f32d7472b24a4 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.109 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APT61_RS13025 ed657660b5c787291c6f32d7472b24a4 118 Pfam PF00453 Ribosomal protein L20 3 109 2.4E-49 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APT61_RS13025 ed657660b5c787291c6f32d7472b24a4 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 4.6E-53 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APT61_RS13025 ed657660b5c787291c6f32d7472b24a4 118 SUPERFAMILY SSF74731 3 117 1.96E-50 T 22-04-2016 APT61_RS13025 ed657660b5c787291c6f32d7472b24a4 118 PANTHER PTHR10986:SF12 2 117 4.7E-68 T 22-04-2016 APT61_RS13025 ed657660b5c787291c6f32d7472b24a4 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 APT61_RS13025 ed657660b5c787291c6f32d7472b24a4 118 Gene3D G3DSA:1.10.1900.20 55 117 3.7E-31 T 22-04-2016 APT61_RS13025 ed657660b5c787291c6f32d7472b24a4 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 3.0E-14 T 22-04-2016 APT61_RS00025 9d167bd3154f08e0dc0db944408694de 149 PANTHER PTHR19384:SF81 1 148 6.2E-59 T 22-04-2016 APT61_RS00025 9d167bd3154f08e0dc0db944408694de 149 SUPERFAMILY SSF52218 1 147 2.92E-37 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS00025 9d167bd3154f08e0dc0db944408694de 149 Pfam PF00258 Flavodoxin 7 138 4.1E-22 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APT61_RS00025 9d167bd3154f08e0dc0db944408694de 149 Gene3D G3DSA:3.40.50.360 1 147 1.2E-33 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS00025 9d167bd3154f08e0dc0db944408694de 149 PRINTS PR00369 Flavodoxin signature 5 18 5.2E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APT61_RS00025 9d167bd3154f08e0dc0db944408694de 149 PRINTS PR00369 Flavodoxin signature 51 62 5.2E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APT61_RS00025 9d167bd3154f08e0dc0db944408694de 149 PRINTS PR00369 Flavodoxin signature 82 92 5.2E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APT61_RS00025 9d167bd3154f08e0dc0db944408694de 149 PANTHER PTHR19384 1 148 6.2E-59 T 22-04-2016 APT61_RS04415 d0b9498bc197e44ef9651a3312199188 176 Pfam PF00293 NUDIX domain 7 146 5.6E-27 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APT61_RS04415 d0b9498bc197e44ef9651a3312199188 176 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APT61_RS04415 d0b9498bc197e44ef9651a3312199188 176 Gene3D G3DSA:3.90.79.10 3 151 1.8E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS04415 d0b9498bc197e44ef9651a3312199188 176 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-7 T 22-04-2016 IPR020476 NUDIX hydrolase APT61_RS04415 d0b9498bc197e44ef9651a3312199188 176 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-7 T 22-04-2016 IPR020476 NUDIX hydrolase APT61_RS04415 d0b9498bc197e44ef9651a3312199188 176 PANTHER PTHR23114 1 156 1.3E-68 T 22-04-2016 APT61_RS04415 d0b9498bc197e44ef9651a3312199188 176 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 38.004 T 22-04-2016 IPR022927 RNA pyrophosphohydrolase RppH APT61_RS04415 d0b9498bc197e44ef9651a3312199188 176 SUPERFAMILY SSF55811 5 157 4.47E-33 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS00855 83262b1b4fdab6ac4f5b2099428aca62 348 Pfam PF02706 Chain length determinant protein 15 172 1.8E-15 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APT61_RS00855 83262b1b4fdab6ac4f5b2099428aca62 348 Gene3D G3DSA:3.30.1890.10 257 318 1.7E-89 T 22-04-2016 APT61_RS00855 83262b1b4fdab6ac4f5b2099428aca62 348 Gene3D G3DSA:3.30.1890.10 54 221 1.7E-89 T 22-04-2016 APT61_RS00855 83262b1b4fdab6ac4f5b2099428aca62 348 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 8 347 56.41 T 22-04-2016 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 UniPathway: UPA00566 APT61_RS00855 83262b1b4fdab6ac4f5b2099428aca62 348 PANTHER PTHR32309:SF16 1 346 6.1E-247 T 22-04-2016 APT61_RS00855 83262b1b4fdab6ac4f5b2099428aca62 348 SUPERFAMILY SSF160355 54 318 1.44E-83 T 22-04-2016 APT61_RS00855 83262b1b4fdab6ac4f5b2099428aca62 348 PANTHER PTHR32309 1 346 6.1E-247 T 22-04-2016 APT61_RS03545 3b1baf9bc1c08e072d88f1a50f956c48 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.561 T 22-04-2016 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 APT61_RS03545 3b1baf9bc1c08e072d88f1a50f956c48 476 Gene3D G3DSA:3.40.1190.20 13 313 5.1E-69 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS03545 3b1baf9bc1c08e072d88f1a50f956c48 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 473 5.8E-65 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 APT61_RS03545 3b1baf9bc1c08e072d88f1a50f956c48 476 SUPERFAMILY SSF52374 340 471 9.01E-22 T 22-04-2016 APT61_RS03545 3b1baf9bc1c08e072d88f1a50f956c48 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 7.8E-128 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 APT61_RS03545 3b1baf9bc1c08e072d88f1a50f956c48 476 SUPERFAMILY SSF53613 12 309 1.33E-59 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS03545 3b1baf9bc1c08e072d88f1a50f956c48 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 5.4E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APT61_RS03545 3b1baf9bc1c08e072d88f1a50f956c48 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APT61_RS03545 3b1baf9bc1c08e072d88f1a50f956c48 476 PANTHER PTHR10584 1 338 2.2E-154 T 22-04-2016 APT61_RS03545 3b1baf9bc1c08e072d88f1a50f956c48 476 Pfam PF00294 pfkB family carbohydrate kinase 12 305 1.1E-56 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APT61_RS03545 3b1baf9bc1c08e072d88f1a50f956c48 476 Pfam PF01467 Cytidylyltransferase-like 345 442 7.4E-15 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APT61_RS03545 3b1baf9bc1c08e072d88f1a50f956c48 476 Gene3D G3DSA:3.40.50.620 340 461 6.5E-36 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS03545 3b1baf9bc1c08e072d88f1a50f956c48 476 PANTHER PTHR10584:SF159 1 338 2.2E-154 T 22-04-2016 APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 SUPERFAMILY SSF50447 205 301 3.14E-30 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 Gene3D G3DSA:3.40.50.300 3 208 4.7E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 8.1E-34 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.4E-17 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 8.1E-15 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 SUPERFAMILY SSF52540 6 219 3.02E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 4.2E-239 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 Gene3D G3DSA:2.40.30.10 209 298 4.3E-37 T 22-04-2016 APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 6.2E-58 T 22-04-2016 APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 SUPERFAMILY SSF50465 298 393 2.62E-36 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.166 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 PANTHER PTHR23115 1 392 0.0 T 22-04-2016 APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 PANTHER PTHR23115:SF151 1 392 0.0 T 22-04-2016 APT61_RS21230 ebc80398aa1d24767b2e3c11bbc7e468 394 Gene3D G3DSA:2.40.30.10 300 393 8.4E-47 T 22-04-2016 APT61_RS02520 595d7b414dcac173afeb8020bc01625f 163 SUPERFAMILY SSF101738 3 112 2.75E-48 T 22-04-2016 IPR007481 Stringent starvation protein B APT61_RS02520 595d7b414dcac173afeb8020bc01625f 163 PIRSF PIRSF005276 3 163 2.2E-60 T 22-04-2016 IPR007481 Stringent starvation protein B APT61_RS02520 595d7b414dcac173afeb8020bc01625f 163 Gene3D G3DSA:2.30.30.220 3 111 3.2E-52 T 22-04-2016 IPR007481 Stringent starvation protein B APT61_RS02520 595d7b414dcac173afeb8020bc01625f 163 PANTHER PTHR37486 2 163 2.5E-85 T 22-04-2016 APT61_RS02520 595d7b414dcac173afeb8020bc01625f 163 PANTHER PTHR37486:SF1 2 163 2.5E-85 T 22-04-2016 APT61_RS02520 595d7b414dcac173afeb8020bc01625f 163 Pfam PF04386 Stringent starvation protein B 9 163 3.0E-45 T 22-04-2016 IPR007481 Stringent starvation protein B APT61_RS19135 14563e8c15c562c31c7ecb994102bfe2 338 Gene3D G3DSA:3.90.1550.10 1 247 2.3E-82 T 22-04-2016 APT61_RS19135 14563e8c15c562c31c7ecb994102bfe2 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 59.037 T 22-04-2016 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 UniPathway: UPA00537|UniPathway: UPA00537 APT61_RS19135 14563e8c15c562c31c7ecb994102bfe2 338 SUPERFAMILY SSF82649 248 335 4.08E-24 T 22-04-2016 APT61_RS19135 14563e8c15c562c31c7ecb994102bfe2 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 332 3.6E-18 T 22-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 APT61_RS19135 14563e8c15c562c31c7ecb994102bfe2 338 PANTHER PTHR12561 1 338 3.0E-252 T 22-04-2016 APT61_RS19135 14563e8c15c562c31c7ecb994102bfe2 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 158 2.6E-8 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APT61_RS19135 14563e8c15c562c31c7ecb994102bfe2 338 SUPERFAMILY SSF55681 3 247 1.99E-78 T 22-04-2016 APT61_RS19135 14563e8c15c562c31c7ecb994102bfe2 338 PANTHER PTHR12561:SF5 1 338 3.0E-252 T 22-04-2016 APT61_RS19135 14563e8c15c562c31c7ecb994102bfe2 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 2 329 1.7E-133 T 22-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 APT61_RS19135 14563e8c15c562c31c7ecb994102bfe2 338 Gene3D G3DSA:3.30.390.50 249 315 1.3E-13 T 22-04-2016 APT61_RS20805 60bf3efdcfa6165923d5052f9bedb720 424 PANTHER PTHR30061:SF1 1 424 1.3E-55 T 22-04-2016 APT61_RS20805 60bf3efdcfa6165923d5052f9bedb720 424 Gene3D G3DSA:3.40.190.10 315 348 3.7E-31 T 22-04-2016 APT61_RS20805 60bf3efdcfa6165923d5052f9bedb720 424 Gene3D G3DSA:3.40.190.10 22 137 3.7E-31 T 22-04-2016 APT61_RS20805 60bf3efdcfa6165923d5052f9bedb720 424 SUPERFAMILY SSF53850 22 415 5.18E-56 T 22-04-2016 APT61_RS20805 60bf3efdcfa6165923d5052f9bedb720 424 Pfam PF13416 Bacterial extracellular solute-binding protein 43 347 2.4E-23 T 22-04-2016 APT61_RS20805 60bf3efdcfa6165923d5052f9bedb720 424 Gene3D G3DSA:3.40.190.10 139 314 1.7E-16 T 22-04-2016 APT61_RS20805 60bf3efdcfa6165923d5052f9bedb720 424 PANTHER PTHR30061 1 424 1.3E-55 T 22-04-2016 APT61_RS00565 9c2ffd90b4e676ffa54e4494dcfcbf66 176 SUPERFAMILY SSF56235 2 172 8.14E-59 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS00565 9c2ffd90b4e676ffa54e4494dcfcbf66 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.706 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APT61_RS00565 9c2ffd90b4e676ffa54e4494dcfcbf66 176 Pfam PF00227 Proteasome subunit 2 167 1.5E-22 T 22-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 APT61_RS00565 9c2ffd90b4e676ffa54e4494dcfcbf66 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 8.6E-86 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APT61_RS00565 9c2ffd90b4e676ffa54e4494dcfcbf66 176 Gene3D G3DSA:3.60.20.10 2 172 2.9E-84 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS00565 9c2ffd90b4e676ffa54e4494dcfcbf66 176 PIRSF PIRSF039093 1 175 2.4E-87 T 22-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 APT61_RS00565 9c2ffd90b4e676ffa54e4494dcfcbf66 176 PANTHER PTHR32194 2 172 6.2E-125 T 22-04-2016 APT61_RS04375 ebef46a43a6fc355b28185417619d368 257 SUPERFAMILY SSF48008 97 233 8.37E-24 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS04375 ebef46a43a6fc355b28185417619d368 257 SMART SM00895 98 225 2.4E-18 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS04375 ebef46a43a6fc355b28185417619d368 257 SMART SM00345 16 75 2.5E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS04375 ebef46a43a6fc355b28185417619d368 257 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 5.7E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS04375 ebef46a43a6fc355b28185417619d368 257 Gene3D G3DSA:1.20.120.530 96 236 1.7E-25 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS04375 ebef46a43a6fc355b28185417619d368 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.4E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS04375 ebef46a43a6fc355b28185417619d368 257 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.4E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS04375 ebef46a43a6fc355b28185417619d368 257 PANTHER PTHR11751:SF389 13 114 3.5E-37 T 22-04-2016 APT61_RS04375 ebef46a43a6fc355b28185417619d368 257 Pfam PF07729 FCD domain 98 224 3.7E-19 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS04375 ebef46a43a6fc355b28185417619d368 257 PANTHER PTHR11751 13 114 3.5E-37 T 22-04-2016 APT61_RS04375 ebef46a43a6fc355b28185417619d368 257 Gene3D G3DSA:1.10.10.10 10 81 3.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04375 ebef46a43a6fc355b28185417619d368 257 SUPERFAMILY SSF46785 10 79 1.34E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00220 043163213f3c89428515d4604d3d12ce 298 PANTHER PTHR22981 1 292 1.1E-86 T 22-04-2016 APT61_RS00220 043163213f3c89428515d4604d3d12ce 298 SUPERFAMILY SSF51735 1 160 3.0E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00220 043163213f3c89428515d4604d3d12ce 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 160 1.6E-43 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APT61_RS00220 043163213f3c89428515d4604d3d12ce 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 APT61_RS00220 043163213f3c89428515d4604d3d12ce 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 8.2E-27 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 APT61_RS00220 043163213f3c89428515d4604d3d12ce 298 Gene3D G3DSA:1.10.1040.10 164 291 5.4E-37 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS00220 043163213f3c89428515d4604d3d12ce 298 Hamap MF_01913 3-sulfolactaldehyde reductase. 1 292 65.287 T 22-04-2016 IPR030876 3-sulfolactaldehyde reductase GO:0061596|GO:1902777 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|MetaCyc: PWY-7446 APT61_RS00220 043163213f3c89428515d4604d3d12ce 298 PIRSF PIRSF000103 1 295 1.2E-98 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 APT61_RS00220 043163213f3c89428515d4604d3d12ce 298 Gene3D G3DSA:3.40.50.720 2 163 8.1E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00220 043163213f3c89428515d4604d3d12ce 298 SUPERFAMILY SSF48179 163 286 2.15E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS20910 3fcc2ac10b664891a5e3e08b2464dd47 80 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 63 1.2E-25 T 22-04-2016 IPR014318 Phage shock protein, PspG APT61_RS20910 3fcc2ac10b664891a5e3e08b2464dd47 80 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 64 1.1E-25 T 22-04-2016 IPR014318 Phage shock protein, PspG APT61_RS04975 09fe91941c5f12c8e0a7297f27486591 290 PANTHER PTHR30134:SF2 41 288 9.9E-145 T 22-04-2016 APT61_RS04975 09fe91941c5f12c8e0a7297f27486591 290 PANTHER PTHR30134 41 288 9.9E-145 T 22-04-2016 APT61_RS04975 09fe91941c5f12c8e0a7297f27486591 290 SUPERFAMILY SSF52540 91 286 1.36E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04975 09fe91941c5f12c8e0a7297f27486591 290 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 106 266 6.1E-35 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APT61_RS04975 09fe91941c5f12c8e0a7297f27486591 290 Gene3D G3DSA:3.40.50.300 113 180 5.8E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04975 09fe91941c5f12c8e0a7297f27486591 290 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 76 289 2.8E-95 T 22-04-2016 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 Pfam PF00459 Inositol monophosphatase family 17 229 1.1E-48 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 SUPERFAMILY SSF52799 277 441 8.91E-14 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 Gene3D G3DSA:3.30.540.10 12 157 4.0E-40 T 22-04-2016 APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 Gene3D G3DSA:3.40.190.80 158 259 6.0E-23 T 22-04-2016 APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 Gene3D G3DSA:3.90.190.10 295 441 1.2E-13 T 22-04-2016 IPR029021 Protein-tyrosine phosphatase-like APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 PANTHER PTHR20854 2 227 7.9E-64 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 PANTHER PTHR20854:SF4 2 227 7.9E-64 T 22-04-2016 APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 3.8E-29 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 3.8E-29 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 3.8E-29 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 3.8E-29 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 PRINTS PR00377 Inositol monophosphatase superfamily signature 134 157 3.8E-29 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 3.8E-29 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS14640 520f23d7442b2ea7ae1773ae024ad92c 475 SUPERFAMILY SSF56655 12 257 2.09E-65 T 22-04-2016 APT61_RS21490 7c7d6b37db60a3731e701387104a0a21 461 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 9 456 5.8E-180 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 APT61_RS21490 7c7d6b37db60a3731e701387104a0a21 461 PANTHER PTHR32328:SF0 1 461 1.1E-234 T 22-04-2016 APT61_RS21490 7c7d6b37db60a3731e701387104a0a21 461 Gene3D G3DSA:3.40.640.10 133 317 4.1E-31 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS21490 7c7d6b37db60a3731e701387104a0a21 461 PANTHER PTHR32328 1 461 1.1E-234 T 22-04-2016 APT61_RS21490 7c7d6b37db60a3731e701387104a0a21 461 SUPERFAMILY SSF53383 77 344 3.45E-44 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS21490 7c7d6b37db60a3731e701387104a0a21 461 Pfam PF03841 L-seryl-tRNA selenium transferase 82 449 2.7E-169 T 22-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 APT61_RS21490 7c7d6b37db60a3731e701387104a0a21 461 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 461 245.326 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 APT61_RS21490 7c7d6b37db60a3731e701387104a0a21 461 Pfam PF12390 Selenocysteine synthase N terminal 8 47 1.5E-7 T 22-04-2016 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 APT61_RS21400 5b85d80163525eb0c0f7c5e04b8a2b91 484 Gene3D G3DSA:3.30.420.40 244 482 1.4E-53 T 22-04-2016 APT61_RS21400 5b85d80163525eb0c0f7c5e04b8a2b91 484 PANTHER PTHR10196:SF72 1 483 0.0 T 22-04-2016 APT61_RS21400 5b85d80163525eb0c0f7c5e04b8a2b91 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 4.0E-189 T 22-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 APT61_RS21400 5b85d80163525eb0c0f7c5e04b8a2b91 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 435 2.9E-33 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APT61_RS21400 5b85d80163525eb0c0f7c5e04b8a2b91 484 SUPERFAMILY SSF53067 2 242 6.24E-74 T 22-04-2016 APT61_RS21400 5b85d80163525eb0c0f7c5e04b8a2b91 484 PANTHER PTHR10196 1 483 0.0 T 22-04-2016 APT61_RS21400 5b85d80163525eb0c0f7c5e04b8a2b91 484 Gene3D G3DSA:3.30.420.40 1 240 2.6E-68 T 22-04-2016 APT61_RS21400 5b85d80163525eb0c0f7c5e04b8a2b91 484 SUPERFAMILY SSF53067 243 482 7.92E-64 T 22-04-2016 APT61_RS21400 5b85d80163525eb0c0f7c5e04b8a2b91 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 1.1E-82 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APT61_RS21400 5b85d80163525eb0c0f7c5e04b8a2b91 484 PIRSF PIRSF000538 1 484 5.6E-137 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APT61_RS21400 5b85d80163525eb0c0f7c5e04b8a2b91 484 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 347 367 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APT61_RS21400 5b85d80163525eb0c0f7c5e04b8a2b91 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APT61_RS14265 e65bda739cdd5cbda6a6c51bdf7e5d4e 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 50.414 T 22-04-2016 IPR023710 Probable phosphatase YcdX GO:0008270 APT61_RS14265 e65bda739cdd5cbda6a6c51bdf7e5d4e 245 SMART SM00481 4 78 4.4E-17 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APT61_RS14265 e65bda739cdd5cbda6a6c51bdf7e5d4e 245 Pfam PF02811 PHP domain 5 115 2.6E-7 T 22-04-2016 IPR004013 PHP domain GO:0003824 APT61_RS14265 e65bda739cdd5cbda6a6c51bdf7e5d4e 245 PANTHER PTHR36928 1 245 1.6E-111 T 22-04-2016 APT61_RS14265 e65bda739cdd5cbda6a6c51bdf7e5d4e 245 Gene3D G3DSA:3.20.20.140 1 235 2.0E-61 T 22-04-2016 APT61_RS14265 e65bda739cdd5cbda6a6c51bdf7e5d4e 245 SUPERFAMILY SSF89550 3 241 1.29E-62 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APT61_RS00375 bccb49bc72d9994e7a8694ecc3a4f57f 182 Pfam PF01381 Helix-turn-helix 16 64 2.3E-12 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS00375 bccb49bc72d9994e7a8694ecc3a4f57f 182 SUPERFAMILY SSF47413 5 71 2.73E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS00375 bccb49bc72d9994e7a8694ecc3a4f57f 182 Gene3D G3DSA:1.10.260.40 9 105 2.2E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS00375 bccb49bc72d9994e7a8694ecc3a4f57f 182 PANTHER PTHR10245 8 177 3.2E-26 T 22-04-2016 APT61_RS00375 bccb49bc72d9994e7a8694ecc3a4f57f 182 Gene3D G3DSA:2.60.120.10 106 178 1.2E-20 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS00375 bccb49bc72d9994e7a8694ecc3a4f57f 182 SUPERFAMILY SSF51182 59 179 4.15E-18 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS00375 bccb49bc72d9994e7a8694ecc3a4f57f 182 SMART SM00530 11 66 1.6E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS04870 fc4f077eb268a92f29017fcaaedd8fa3 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APT61_RS04870 fc4f077eb268a92f29017fcaaedd8fa3 61 PANTHER PTHR34984 1 61 6.2E-34 T 22-04-2016 APT61_RS04870 fc4f077eb268a92f29017fcaaedd8fa3 61 Pfam PF02599 Global regulator protein family 1 52 2.6E-27 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APT61_RS04870 fc4f077eb268a92f29017fcaaedd8fa3 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 22-04-2016 APT61_RS04870 fc4f077eb268a92f29017fcaaedd8fa3 61 PANTHER PTHR34984:SF1 1 61 6.2E-34 T 22-04-2016 APT61_RS04870 fc4f077eb268a92f29017fcaaedd8fa3 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 2.0E-31 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APT61_RS04870 fc4f077eb268a92f29017fcaaedd8fa3 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.514 T 22-04-2016 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 APT61_RS17275 57673bfd0e1b1e327fed6af010593b98 272 Gene3D G3DSA:3.40.50.1000 2 72 1.3E-44 T 22-04-2016 IPR023214 HAD-like domain APT61_RS17275 57673bfd0e1b1e327fed6af010593b98 272 Gene3D G3DSA:3.40.50.1000 175 263 1.3E-44 T 22-04-2016 IPR023214 HAD-like domain APT61_RS17275 57673bfd0e1b1e327fed6af010593b98 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 4.3E-45 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APT61_RS17275 57673bfd0e1b1e327fed6af010593b98 272 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 272 63.394 T 22-04-2016 IPR023938 HMP-PP phosphatase GO:0016818 APT61_RS17275 57673bfd0e1b1e327fed6af010593b98 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 7.6E-55 T 22-04-2016 IPR023214 HAD-like domain APT61_RS17275 57673bfd0e1b1e327fed6af010593b98 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 APT61_RS17275 57673bfd0e1b1e327fed6af010593b98 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 22-04-2016 APT61_RS17275 57673bfd0e1b1e327fed6af010593b98 272 Gene3D G3DSA:3.30.1240.10 83 174 2.0E-12 T 22-04-2016 APT61_RS17275 57673bfd0e1b1e327fed6af010593b98 272 PANTHER PTHR10000:SF21 1 264 1.2E-175 T 22-04-2016 APT61_RS17275 57673bfd0e1b1e327fed6af010593b98 272 SUPERFAMILY SSF56784 1 262 2.72E-62 T 22-04-2016 IPR023214 HAD-like domain APT61_RS17275 57673bfd0e1b1e327fed6af010593b98 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 1.4E-58 T 22-04-2016 IPR000150 Cof protein GO:0016787 APT61_RS17275 57673bfd0e1b1e327fed6af010593b98 272 PANTHER PTHR10000 1 264 1.2E-175 T 22-04-2016 APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 Gene3D G3DSA:3.30.70.20 200 233 5.3E-5 T 22-04-2016 APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 PANTHER PTHR24960 156 210 1.6E-12 T 22-04-2016 APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 SUPERFAMILY SSF54862 1 42 5.66E-12 T 22-04-2016 APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 PANTHER PTHR24960 14 45 1.6E-12 T 22-04-2016 APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 SUPERFAMILY SSF54862 147 212 4.44E-17 T 22-04-2016 APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 Gene3D G3DSA:3.30.70.20 160 199 5.5E-14 T 22-04-2016 APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 23 34 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 PANTHER PTHR24960:SF48 156 210 1.6E-12 T 22-04-2016 APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 PANTHER PTHR24960:SF48 14 45 1.6E-12 T 22-04-2016 APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 Pfam PF00037 4Fe-4S binding domain 188 209 1.7E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 Pfam PF00037 4Fe-4S binding domain 17 38 7.4E-7 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 Pfam PF00037 4Fe-4S binding domain 160 179 8.8E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 Gene3D G3DSA:3.30.70.20 1 43 8.6E-11 T 22-04-2016 APT61_RS12745 983c4d7c41a49c755dcdb2c3625e56ab 259 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 164 175 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 SUPERFAMILY SSF51735 457 630 3.54E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 ProSitePatterns PS00324 Aspartokinase signature. 14 22 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 PANTHER PTHR21499:SF29 386 810 1.0E-245 T 22-04-2016 APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 Gene3D G3DSA:3.40.50.720 457 628 2.6E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 Pfam PF00742 Homoserine dehydrogenase 608 803 9.7E-43 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 PANTHER PTHR21499 386 810 1.0E-245 T 22-04-2016 APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 654 676 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 Pfam PF00696 Amino acid kinase family 12 284 1.4E-42 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 465 600 1.6E-24 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 Gene3D G3DSA:3.30.360.10 629 786 1.5E-50 T 22-04-2016 APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 SUPERFAMILY SSF55347 608 791 8.5E-46 T 22-04-2016 APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 Gene3D G3DSA:3.40.1160.10 12 59 4.9E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 Gene3D G3DSA:3.40.1160.10 114 298 4.9E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 SUPERFAMILY SSF53633 12 299 5.24E-54 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS00605 d3aa4340eda1df9e88e3617d6f25c9b8 810 PIRSF PIRSF000727 12 810 1.6E-294 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 APT61_RS06465 857dd5f9bd81475e731268d893420121 551 Gene3D G3DSA:3.40.50.1220 190 343 1.0E-48 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS06465 857dd5f9bd81475e731268d893420121 551 TIGRFAM TIGR03393 indolpyr_decarb: indolepyruvate decarboxylase 5 541 2.8E-294 T 22-04-2016 IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae GO:0009851|GO:0047434 KEGG: 00380+4.1.1.74|MetaCyc: PWY-5081|UniPathway: UPA00151 APT61_RS06465 857dd5f9bd81475e731268d893420121 551 PANTHER PTHR18968:SF4 1 548 2.8E-232 T 22-04-2016 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 APT61_RS06465 857dd5f9bd81475e731268d893420121 551 PANTHER PTHR18968 1 548 2.8E-232 T 22-04-2016 APT61_RS06465 857dd5f9bd81475e731268d893420121 551 Gene3D G3DSA:3.40.50.970 4 179 9.1E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS06465 857dd5f9bd81475e731268d893420121 551 PIRSF PIRSF036565 1 550 8.6E-207 T 22-04-2016 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 APT61_RS06465 857dd5f9bd81475e731268d893420121 551 SUPERFAMILY SSF52518 357 538 2.68E-45 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS06465 857dd5f9bd81475e731268d893420121 551 SUPERFAMILY SSF52518 5 181 3.59E-43 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS06465 857dd5f9bd81475e731268d893420121 551 SUPERFAMILY SSF52467 167 338 2.14E-32 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS06465 857dd5f9bd81475e731268d893420121 551 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 179 4.3E-33 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APT61_RS06465 857dd5f9bd81475e731268d893420121 551 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 202 317 7.4E-20 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APT61_RS06465 857dd5f9bd81475e731268d893420121 551 Gene3D G3DSA:3.40.50.970 357 537 5.8E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS06465 857dd5f9bd81475e731268d893420121 551 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 390 527 7.7E-20 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APT61_RS18775 30d41dacb7ba045ba81c2d2ea67d16e9 140 Gene3D G3DSA:1.10.10.10 3 138 8.4E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18775 30d41dacb7ba045ba81c2d2ea67d16e9 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 1.0E-4 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS18775 30d41dacb7ba045ba81c2d2ea67d16e9 140 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 1.0E-4 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS18775 30d41dacb7ba045ba81c2d2ea67d16e9 140 Pfam PF01047 MarR family 35 91 2.2E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS18775 30d41dacb7ba045ba81c2d2ea67d16e9 140 PANTHER PTHR33164:SF5 6 138 9.6E-37 T 22-04-2016 APT61_RS18775 30d41dacb7ba045ba81c2d2ea67d16e9 140 SMART SM00347 28 126 1.7E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS18775 30d41dacb7ba045ba81c2d2ea67d16e9 140 PANTHER PTHR33164 6 138 9.6E-37 T 22-04-2016 APT61_RS18775 30d41dacb7ba045ba81c2d2ea67d16e9 140 SUPERFAMILY SSF46785 10 137 3.16E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS08395 cb35beb3a3fa890d36e977c8a2bd7318 116 SUPERFAMILY SSF63592 1 98 2.62E-39 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 APT61_RS08395 cb35beb3a3fa890d36e977c8a2bd7318 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 4.6E-42 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 APT61_RS08395 cb35beb3a3fa890d36e977c8a2bd7318 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 28.478 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 APT61_RS08395 cb35beb3a3fa890d36e977c8a2bd7318 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 98 6.0E-43 T 22-04-2016 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.4E-32 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 SUPERFAMILY SSF68912 1 46 3.37E-12 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 Gene3D G3DSA:1.10.720.10 1 47 5.2E-22 T 22-04-2016 APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 SMART SM00357 52 118 9.6E-19 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 SMART SM00382 170 355 5.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 PANTHER PTHR15184 160 416 1.5E-199 T 22-04-2016 APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 PANTHER PTHR15184 19 141 1.5E-199 T 22-04-2016 APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 Gene3D G3DSA:3.40.50.300 132 418 2.1E-106 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 3.1E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 1.3E-22 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 251.821 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 2.3E-222 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 SUPERFAMILY SSF52540 90 371 1.6E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 SMART SM00959 5 47 1.2E-16 T 22-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 Gene3D G3DSA:2.40.50.140 49 117 6.5E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 PANTHER PTHR15184:SF34 160 416 1.5E-199 T 22-04-2016 APT61_RS00845 5b191b1b02bbdc77d09d05733bb0c82e 419 PANTHER PTHR15184:SF34 19 141 1.5E-199 T 22-04-2016 APT61_RS08350 ffbd120f2275e2a2cccfc4c170585811 447 PANTHER PTHR36106 1 447 2.1E-280 T 22-04-2016 APT61_RS08350 ffbd120f2275e2a2cccfc4c170585811 447 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 379 6.6E-151 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APT61_RS08350 ffbd120f2275e2a2cccfc4c170585811 447 PIRSF PIRSF004539 1 447 8.9E-184 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APT61_RS08350 ffbd120f2275e2a2cccfc4c170585811 447 PANTHER PTHR36106:SF3 1 447 2.1E-280 T 22-04-2016 APT61_RS08350 ffbd120f2275e2a2cccfc4c170585811 447 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 443 3.2E-159 T 22-04-2016 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 APT61_RS11235 fc42d5fafacff2a39337b9ca81a45b49 410 SUPERFAMILY SSF54975 2 132 2.58E-30 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APT61_RS11235 fc42d5fafacff2a39337b9ca81a45b49 410 SMART SM01034 2 94 7.8E-32 T 22-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 APT61_RS11235 fc42d5fafacff2a39337b9ca81a45b49 410 Gene3D G3DSA:3.20.20.450 163 389 1.5E-53 T 22-04-2016 IPR001633 EAL domain APT61_RS11235 fc42d5fafacff2a39337b9ca81a45b49 410 PANTHER PTHR33121 39 397 6.7E-97 T 22-04-2016 APT61_RS11235 fc42d5fafacff2a39337b9ca81a45b49 410 Pfam PF04940 Sensors of blue-light using FAD 2 92 1.4E-22 T 22-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 APT61_RS11235 fc42d5fafacff2a39337b9ca81a45b49 410 SUPERFAMILY SSF141868 164 389 4.32E-57 T 22-04-2016 IPR001633 EAL domain APT61_RS11235 fc42d5fafacff2a39337b9ca81a45b49 410 Pfam PF00563 EAL domain 167 389 4.2E-49 T 22-04-2016 IPR001633 EAL domain APT61_RS11235 fc42d5fafacff2a39337b9ca81a45b49 410 SMART SM00052 155 394 2.4E-44 T 22-04-2016 IPR001633 EAL domain APT61_RS11235 fc42d5fafacff2a39337b9ca81a45b49 410 PANTHER PTHR33121:SF15 39 397 6.7E-97 T 22-04-2016 APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 SMART SM00316 642 725 1.5E-16 T 22-04-2016 IPR022967 RNA-binding domain, S1 APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 SUPERFAMILY SSF50249 138 235 5.52E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 Gene3D G3DSA:2.40.50.140 644 734 2.2E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 Pfam PF08461 Ribonuclease R winged-helix domain 23 85 9.1E-14 T 22-04-2016 IPR013668 Ribonuclease R winged-helix domain APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 Pfam PF00773 RNB domain 260 587 2.3E-109 T 22-04-2016 APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 Pfam PF08206 Ribonuclease B OB domain 87 144 1.8E-21 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 PANTHER PTHR23355 1 810 0.0 T 22-04-2016 APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 SUPERFAMILY SSF50249 67 145 1.53E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 SUPERFAMILY SSF50249 644 724 2.55E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 725 2.7E-285 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 SMART SM00357 86 145 4.4E-14 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 725 6.5E-286 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 Pfam PF00575 S1 RNA binding domain 641 724 1.4E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 Hamap MF_01895 Ribonuclease R [rnr]. 38 725 57.743 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 PANTHER PTHR23355:SF9 1 810 0.0 T 22-04-2016 APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 SUPERFAMILY SSF50249 222 641 7.42E-142 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS20310 e5f6453758ee41aaae0f840cc6d90ae1 813 SMART SM00955 260 588 6.5E-184 T 22-04-2016 APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 PANTHER PTHR11707 1 338 1.0E-261 T 22-04-2016 APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 1.5E-16 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.5E-16 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 1.5E-16 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 1.4E-133 T 22-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 PIRSF PIRSF500176 2 332 3.1E-115 T 22-04-2016 APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 Gene3D G3DSA:3.40.50.40 211 336 4.0E-51 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 Gene3D G3DSA:3.40.50.1170 5 201 1.5E-76 T 22-04-2016 IPR027474 L-asparaginase, N-terminal APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 PANTHER PTHR11707:SF31 1 338 1.0E-261 T 22-04-2016 APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 Pfam PF00710 Asparaginase, N-terminal 6 187 3.3E-64 T 22-04-2016 IPR027474 L-asparaginase, N-terminal APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 SUPERFAMILY SSF53774 3 335 1.2E-111 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 SMART SM00870 5 323 1.4E-139 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APT61_RS13260 e0fee24266096cbda33b49a6ec4f4230 338 PIRSF PIRSF001220 1 334 2.5E-94 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 APT61_RS10250 ccdbc82673a733d998671900cc9d8045 139 PANTHER PTHR33516 1 136 3.9E-55 T 22-04-2016 APT61_RS10250 ccdbc82673a733d998671900cc9d8045 139 Pfam PF00717 Peptidase S24-like 57 120 7.2E-13 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B APT61_RS10250 ccdbc82673a733d998671900cc9d8045 139 PANTHER PTHR33516:SF1 1 136 3.9E-55 T 22-04-2016 APT61_RS10250 ccdbc82673a733d998671900cc9d8045 139 SUPERFAMILY SSF51306 13 136 1.6E-35 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C APT61_RS10250 ccdbc82673a733d998671900cc9d8045 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 1.2E-11 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APT61_RS10250 ccdbc82673a733d998671900cc9d8045 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 1.2E-11 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APT61_RS10250 ccdbc82673a733d998671900cc9d8045 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 1.2E-11 T 22-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 APT61_RS10250 ccdbc82673a733d998671900cc9d8045 139 Gene3D G3DSA:2.10.109.10 25 137 3.6E-49 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain APT61_RS14995 22cd7d41eb1c5ebe6d937e762f09457b 760 PANTHER PTHR30191 9 760 0.0 T 22-04-2016 APT61_RS14995 22cd7d41eb1c5ebe6d937e762f09457b 760 Gene3D G3DSA:3.20.70.20 5 760 0.0 T 22-04-2016 APT61_RS14995 22cd7d41eb1c5ebe6d937e762f09457b 760 SUPERFAMILY SSF51998 5 759 4.88E-293 T 22-04-2016 APT61_RS14995 22cd7d41eb1c5ebe6d937e762f09457b 760 Pfam PF01228 Glycine radical 630 741 1.4E-43 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APT61_RS14995 22cd7d41eb1c5ebe6d937e762f09457b 760 PIRSF PIRSF000379 8 760 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APT61_RS14995 22cd7d41eb1c5ebe6d937e762f09457b 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APT61_RS14995 22cd7d41eb1c5ebe6d937e762f09457b 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APT61_RS14995 22cd7d41eb1c5ebe6d937e762f09457b 760 PANTHER PTHR30191:SF7 9 760 0.0 T 22-04-2016 APT61_RS14995 22cd7d41eb1c5ebe6d937e762f09457b 760 Pfam PF02901 Pyruvate formate lyase-like 24 614 2.1E-206 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 APT61_RS00380 3644e1081e4fdad96a24280a6a4e2973 331 Gene3D G3DSA:3.40.50.2300 53 173 1.9E-31 T 22-04-2016 APT61_RS00380 3644e1081e4fdad96a24280a6a4e2973 331 SMART SM00354 1 70 4.2E-16 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS00380 3644e1081e4fdad96a24280a6a4e2973 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 8.3E-11 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS00380 3644e1081e4fdad96a24280a6a4e2973 331 Gene3D G3DSA:3.40.50.2300 174 312 3.5E-27 T 22-04-2016 APT61_RS00380 3644e1081e4fdad96a24280a6a4e2973 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 318 7.7E-56 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APT61_RS00380 3644e1081e4fdad96a24280a6a4e2973 331 Gene3D G3DSA:1.10.260.40 1 52 2.1E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS00380 3644e1081e4fdad96a24280a6a4e2973 331 SUPERFAMILY SSF47413 2 57 3.66E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS00380 3644e1081e4fdad96a24280a6a4e2973 331 SUPERFAMILY SSF53822 61 317 5.98E-41 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS00380 3644e1081e4fdad96a24280a6a4e2973 331 PANTHER PTHR30146 1 325 2.0E-67 T 22-04-2016 APT61_RS08665 6cb14bf26adcbb4d7b2db9904693a191 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 76 8.0E-32 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 APT61_RS08665 6cb14bf26adcbb4d7b2db9904693a191 76 SUPERFAMILY SSF46575 1 76 8.89E-34 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 APT61_RS08665 6cb14bf26adcbb4d7b2db9904693a191 76 Gene3D G3DSA:1.10.1110.10 1 76 4.2E-42 T 22-04-2016 IPR011325 DNA polymerase III-theta, core, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS08665 6cb14bf26adcbb4d7b2db9904693a191 76 Pfam PF06440 DNA polymerase III, theta subunit 2 70 8.1E-38 T 22-04-2016 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 APT61_RS04440 7a684b89273afb6e5c7769fe679b5e9a 187 PIRSF PIRSF004525 1 187 3.4E-53 T 22-04-2016 IPR016419 Prepilin peptidase-dependent protein B, predicted APT61_RS04440 7a684b89273afb6e5c7769fe679b5e9a 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 5.2E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS04440 7a684b89273afb6e5c7769fe679b5e9a 187 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 4 26 2.8E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS05715 92f98f8ba34ded3c7c29ba7625ff66cf 451 Pfam PF13091 PLD-like domain 41 153 2.6E-6 T 22-04-2016 IPR025202 Phospholipase D-like domain APT61_RS05715 92f98f8ba34ded3c7c29ba7625ff66cf 451 Pfam PF13091 PLD-like domain 257 405 1.4E-22 T 22-04-2016 IPR025202 Phospholipase D-like domain APT61_RS05715 92f98f8ba34ded3c7c29ba7625ff66cf 451 SUPERFAMILY SSF56024 9 215 9.1E-28 T 22-04-2016 APT61_RS05715 92f98f8ba34ded3c7c29ba7625ff66cf 451 SUPERFAMILY SSF56024 253 399 2.73E-17 T 22-04-2016 APT61_RS05715 92f98f8ba34ded3c7c29ba7625ff66cf 451 SMART SM00155 352 379 9.9E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APT61_RS05715 92f98f8ba34ded3c7c29ba7625ff66cf 451 SMART SM00155 133 159 0.012 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APT61_RS05715 92f98f8ba34ded3c7c29ba7625ff66cf 451 PANTHER PTHR12586:SF3 1 450 2.3E-272 T 22-04-2016 APT61_RS05715 92f98f8ba34ded3c7c29ba7625ff66cf 451 PIRSF PIRSF000850 1 451 4.0E-257 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APT61_RS05715 92f98f8ba34ded3c7c29ba7625ff66cf 451 PANTHER PTHR12586 1 450 2.3E-272 T 22-04-2016 IPR016270 Phospholipase D, phosphatidylserine synthase type GO:0008654|GO:0016780 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APT61_RS05715 92f98f8ba34ded3c7c29ba7625ff66cf 451 Gene3D G3DSA:3.30.870.10 254 401 2.6E-14 T 22-04-2016 APT61_RS05715 92f98f8ba34ded3c7c29ba7625ff66cf 451 Gene3D G3DSA:3.30.870.10 26 154 1.5E-14 T 22-04-2016 APT61_RS04860 02a78fa63d181a72f7fd3feccde20979 166 Pfam PF02631 RecX family 50 162 5.7E-30 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 APT61_RS04860 02a78fa63d181a72f7fd3feccde20979 166 Gene3D G3DSA:1.10.10.10 116 164 6.3E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04860 02a78fa63d181a72f7fd3feccde20979 166 PANTHER PTHR33602 5 162 2.1E-46 T 22-04-2016 APT61_RS04860 02a78fa63d181a72f7fd3feccde20979 166 Gene3D G3DSA:1.10.10.10 13 69 4.9E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04860 02a78fa63d181a72f7fd3feccde20979 166 Hamap MF_01114 Regulatory protein RecX [recX]. 2 166 13.635 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 APT61_RS04860 02a78fa63d181a72f7fd3feccde20979 166 Gene3D G3DSA:1.10.10.10 70 115 4.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04860 02a78fa63d181a72f7fd3feccde20979 166 PANTHER PTHR33602:SF1 5 162 2.1E-46 T 22-04-2016 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 PANTHER PTHR23406 9 565 0.0 T 22-04-2016 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 72.302 T 22-04-2016 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 2.0E-79 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 Gene3D G3DSA:3.40.50.10380 17 268 1.3E-115 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 SUPERFAMILY SSF51735 271 562 2.26E-93 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 SMART SM00919 271 531 7.9E-128 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 3.3E-102 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 Gene3D G3DSA:3.40.50.720 269 562 6.5E-109 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 PRINTS PR00072 Malic enzyme signature 267 283 1.0E-73 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 PRINTS PR00072 Malic enzyme signature 183 205 1.0E-73 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 PRINTS PR00072 Malic enzyme signature 242 260 1.0E-73 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 PRINTS PR00072 Malic enzyme signature 408 424 1.0E-73 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 PRINTS PR00072 Malic enzyme signature 298 314 1.0E-73 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 PRINTS PR00072 Malic enzyme signature 87 111 1.0E-73 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 PRINTS PR00072 Malic enzyme signature 147 176 1.0E-73 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 SUPERFAMILY SSF53223 6 270 4.6E-110 T 22-04-2016 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 PIRSF PIRSF000106 1 563 1.1E-226 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 PANTHER PTHR23406:SF25 9 565 0.0 T 22-04-2016 APT61_RS11195 140d95e0dddf8dc58ba07fb15b5853fe 565 SMART SM01274 81 261 7.4E-108 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 APT61_RS00900 240b1c822e516a16c8a92b68893dbe3c 460 PIRSF PIRSF006060 1 459 3.2E-63 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS00900 240b1c822e516a16c8a92b68893dbe3c 460 PANTHER PTHR11785:SF28 3 455 0.0 T 22-04-2016 APT61_RS00900 240b1c822e516a16c8a92b68893dbe3c 460 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APT61_RS00900 240b1c822e516a16c8a92b68893dbe3c 460 PANTHER PTHR11785 3 455 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS00900 240b1c822e516a16c8a92b68893dbe3c 460 Pfam PF00324 Amino acid permease 16 428 3.3E-104 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APT61_RS05710 21e643033431faf963db25cd69566100 107 PIRSF PIRSF034456 1 106 3.1E-55 T 22-04-2016 IPR017028 Uncharacterised conserved protein UCP034456 APT61_RS05710 21e643033431faf963db25cd69566100 107 PANTHER PTHR35462:SF1 2 107 1.0E-63 T 22-04-2016 APT61_RS05710 21e643033431faf963db25cd69566100 107 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 24 99 7.8E-10 T 22-04-2016 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein APT61_RS05710 21e643033431faf963db25cd69566100 107 PANTHER PTHR35462 2 107 1.0E-63 T 22-04-2016 APT61_RS10975 0c03bd1a3c3de476962ad3a89583f70c 281 Pfam PF00797 N-acetyltransferase 21 256 2.9E-84 T 22-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 APT61_RS10975 0c03bd1a3c3de476962ad3a89583f70c 281 SUPERFAMILY SSF54001 2 268 2.7E-85 T 22-04-2016 APT61_RS10975 0c03bd1a3c3de476962ad3a89583f70c 281 Gene3D G3DSA:3.30.2140.10 182 259 2.2E-13 T 22-04-2016 APT61_RS10975 0c03bd1a3c3de476962ad3a89583f70c 281 Gene3D G3DSA:3.30.2140.10 2 132 1.2E-38 T 22-04-2016 APT61_RS10975 0c03bd1a3c3de476962ad3a89583f70c 281 PANTHER PTHR11786:SF0 1 256 1.9E-73 T 22-04-2016 APT61_RS10975 0c03bd1a3c3de476962ad3a89583f70c 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 101 126 3.3E-11 T 22-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 APT61_RS10975 0c03bd1a3c3de476962ad3a89583f70c 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 3.3E-11 T 22-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 APT61_RS10975 0c03bd1a3c3de476962ad3a89583f70c 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 3.3E-11 T 22-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 APT61_RS10975 0c03bd1a3c3de476962ad3a89583f70c 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 3.3E-11 T 22-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 APT61_RS10975 0c03bd1a3c3de476962ad3a89583f70c 281 PANTHER PTHR11786 1 256 1.9E-73 T 22-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 PANTHER PTHR11573 30 700 3.2E-256 T 22-04-2016 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 426 449 3.3E-33 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 382 393 3.3E-33 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 465 487 3.3E-33 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 577 604 3.3E-33 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 251 270 3.3E-33 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 493 516 3.3E-33 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 103 696 1.8E-158 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 SUPERFAMILY SSF48168 14 174 4.71E-59 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 Pfam PF02867 Ribonucleotide reductase, barrel domain 176 693 5.7E-140 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 SUPERFAMILY SSF51998 175 698 1.28E-186 T 22-04-2016 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 Pfam PF08343 Ribonucleotide reductase N-terminal 16 97 7.0E-27 T 22-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 566 588 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 100 171 1.0E-11 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 Gene3D G3DSA:3.20.70.20 577 691 2.0E-55 T 22-04-2016 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 Gene3D G3DSA:3.20.70.20 350 513 2.0E-55 T 22-04-2016 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 Gene3D G3DSA:3.20.70.20 108 297 2.0E-55 T 22-04-2016 APT61_RS05100 2bab87a7daf703486b331a9d3ea44821 714 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 15 714 0.0 T 22-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APT61_RS17000 871eca1f4efa27ac746425078266801e 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.3 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APT61_RS17000 871eca1f4efa27ac746425078266801e 169 Pfam PF00731 AIR carboxylase 9 157 5.4E-63 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APT61_RS17000 871eca1f4efa27ac746425078266801e 169 PANTHER PTHR23046 5 166 3.8E-89 T 22-04-2016 APT61_RS17000 871eca1f4efa27ac746425078266801e 169 PANTHER PTHR23046:SF2 5 166 3.8E-89 T 22-04-2016 APT61_RS17000 871eca1f4efa27ac746425078266801e 169 SMART SM01001 8 159 1.8E-102 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APT61_RS17000 871eca1f4efa27ac746425078266801e 169 Gene3D G3DSA:3.40.50.7700 4 163 3.0E-74 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APT61_RS17000 871eca1f4efa27ac746425078266801e 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 163 4.0E-65 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APT61_RS17000 871eca1f4efa27ac746425078266801e 169 PIRSF PIRSF001338 5 166 9.2E-67 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 APT61_RS17000 871eca1f4efa27ac746425078266801e 169 SUPERFAMILY SSF52255 7 165 1.7E-66 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 APT61_RS02940 491b9d7aecc460451d25015f8804b559 296 Gene3D G3DSA:1.10.1040.10 166 294 8.6E-44 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS02940 491b9d7aecc460451d25015f8804b559 296 PANTHER PTHR22981:SF78 1 296 7.7E-243 T 22-04-2016 APT61_RS02940 491b9d7aecc460451d25015f8804b559 296 PIRSF PIRSF000103 1 294 1.8E-94 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 APT61_RS02940 491b9d7aecc460451d25015f8804b559 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 22-04-2016 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 APT61_RS02940 491b9d7aecc460451d25015f8804b559 296 PANTHER PTHR22981 1 296 7.7E-243 T 22-04-2016 APT61_RS02940 491b9d7aecc460451d25015f8804b559 296 Gene3D G3DSA:3.40.50.720 2 164 2.2E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02940 491b9d7aecc460451d25015f8804b559 296 SUPERFAMILY SSF48179 164 293 4.49E-37 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS02940 491b9d7aecc460451d25015f8804b559 296 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 294 1.2E-154 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 APT61_RS02940 491b9d7aecc460451d25015f8804b559 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 284 3.3E-38 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 APT61_RS02940 491b9d7aecc460451d25015f8804b559 296 Hamap MF_02032 2-hydroxy-3-oxopropionate reductase [garR]. 3 296 61.023 T 22-04-2016 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 APT61_RS02940 491b9d7aecc460451d25015f8804b559 296 SUPERFAMILY SSF51735 3 164 1.01E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02940 491b9d7aecc460451d25015f8804b559 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 1.8E-51 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APT61_RS14825 a422abfe5ec2abf440e309429daa23a2 336 PANTHER PTHR11938 5 334 2.7E-106 T 22-04-2016 APT61_RS14825 a422abfe5ec2abf440e309429daa23a2 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.231 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS14825 a422abfe5ec2abf440e309429daa23a2 336 PIRSF PIRSF000164 11 336 5.7E-98 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 APT61_RS14825 a422abfe5ec2abf440e309429daa23a2 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 4.1E-164 T 22-04-2016 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS14825 a422abfe5ec2abf440e309429daa23a2 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 6.2E-92 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 APT61_RS14825 a422abfe5ec2abf440e309429daa23a2 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 APT61_RS14825 a422abfe5ec2abf440e309429daa23a2 336 SUPERFAMILY SSF51395 1 334 9.33E-107 T 22-04-2016 APT61_RS14825 a422abfe5ec2abf440e309429daa23a2 336 Gene3D G3DSA:3.20.20.70 1 335 8.9E-127 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS14825 a422abfe5ec2abf440e309429daa23a2 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 APT61_RS22155 a142b7f42b2b9ae20e2565e7a63d2b02 241 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 9.0E-73 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APT61_RS22155 a142b7f42b2b9ae20e2565e7a63d2b02 241 Gene3D G3DSA:1.20.58.220 9 114 2.4E-36 T 22-04-2016 APT61_RS22155 a142b7f42b2b9ae20e2565e7a63d2b02 241 Pfam PF01895 PhoU domain 128 213 7.1E-17 T 22-04-2016 IPR026022 PhoU domain APT61_RS22155 a142b7f42b2b9ae20e2565e7a63d2b02 241 Pfam PF01895 PhoU domain 27 111 6.3E-21 T 22-04-2016 IPR026022 PhoU domain APT61_RS22155 a142b7f42b2b9ae20e2565e7a63d2b02 241 PIRSF PIRSF003107 7 226 1.7E-67 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APT61_RS22155 a142b7f42b2b9ae20e2565e7a63d2b02 241 PANTHER PTHR10010 1 224 2.8E-95 T 22-04-2016 APT61_RS22155 a142b7f42b2b9ae20e2565e7a63d2b02 241 SUPERFAMILY SSF109755 13 230 3.35E-70 T 22-04-2016 APT61_RS22155 a142b7f42b2b9ae20e2565e7a63d2b02 241 PANTHER PTHR10010:SF14 1 224 2.8E-95 T 22-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 APT61_RS22155 a142b7f42b2b9ae20e2565e7a63d2b02 241 Gene3D G3DSA:1.20.58.220 127 233 1.1E-31 T 22-04-2016 APT61_RS07865 c09908d17f527e814f2b4f10e6b868ec 275 Gene3D G3DSA:3.90.25.10 202 263 3.1E-4 T 22-04-2016 APT61_RS07865 c09908d17f527e814f2b4f10e6b868ec 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 10 214 4.9E-8 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APT61_RS07865 c09908d17f527e814f2b4f10e6b868ec 275 SUPERFAMILY SSF51735 2 265 1.21E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07865 c09908d17f527e814f2b4f10e6b868ec 275 Gene3D G3DSA:3.40.50.720 1 201 1.3E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07865 c09908d17f527e814f2b4f10e6b868ec 275 PANTHER PTHR10366:SF289 3 268 3.1E-69 T 22-04-2016 APT61_RS07865 c09908d17f527e814f2b4f10e6b868ec 275 PANTHER PTHR10366 3 268 3.1E-69 T 22-04-2016 APT61_RS11465 33ea2c4c31b77b6d7b3817e471b1897d 483 SMART SM00267 292 466 5.8E-53 T 22-04-2016 IPR000160 GGDEF domain APT61_RS11465 33ea2c4c31b77b6d7b3817e471b1897d 483 SUPERFAMILY SSF55073 308 463 7.14E-37 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS11465 33ea2c4c31b77b6d7b3817e471b1897d 483 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 303 464 2.1E-39 T 22-04-2016 IPR000160 GGDEF domain APT61_RS11465 33ea2c4c31b77b6d7b3817e471b1897d 483 PANTHER PTHR10799 188 483 9.4E-25 T 22-04-2016 APT61_RS11465 33ea2c4c31b77b6d7b3817e471b1897d 483 Pfam PF00990 Diguanylate cyclase, GGDEF domain 303 462 1.6E-38 T 22-04-2016 IPR000160 GGDEF domain APT61_RS11465 33ea2c4c31b77b6d7b3817e471b1897d 483 PANTHER PTHR10799:SF710 188 483 9.4E-25 T 22-04-2016 APT61_RS11465 33ea2c4c31b77b6d7b3817e471b1897d 483 Gene3D G3DSA:3.30.70.270 305 465 2.0E-42 T 22-04-2016 APT61_RS03795 b97162ad52652be393e3b123bcb9b6e8 238 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APT61_RS03795 b97162ad52652be393e3b123bcb9b6e8 238 Gene3D G3DSA:3.40.50.1360 78 215 3.4E-7 T 22-04-2016 APT61_RS03795 b97162ad52652be393e3b123bcb9b6e8 238 Gene3D G3DSA:1.10.10.10 1 50 7.9E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03795 b97162ad52652be393e3b123bcb9b6e8 238 Pfam PF08220 DeoR-like helix-turn-helix domain 5 59 1.6E-17 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS03795 b97162ad52652be393e3b123bcb9b6e8 238 PANTHER PTHR30363 1 232 1.1E-125 T 22-04-2016 APT61_RS03795 b97162ad52652be393e3b123bcb9b6e8 238 SMART SM01134 74 234 1.1E-50 T 22-04-2016 APT61_RS03795 b97162ad52652be393e3b123bcb9b6e8 238 SMART SM00420 5 57 1.0E-14 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS03795 b97162ad52652be393e3b123bcb9b6e8 238 PANTHER PTHR30363:SF12 1 232 1.1E-125 T 22-04-2016 APT61_RS03795 b97162ad52652be393e3b123bcb9b6e8 238 Pfam PF00455 DeoR C terminal sensor domain 76 232 6.5E-43 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APT61_RS03795 b97162ad52652be393e3b123bcb9b6e8 238 SUPERFAMILY SSF100950 77 234 2.93E-25 T 22-04-2016 APT61_RS03795 b97162ad52652be393e3b123bcb9b6e8 238 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 5.7E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS03795 b97162ad52652be393e3b123bcb9b6e8 238 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 5.7E-8 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS03795 b97162ad52652be393e3b123bcb9b6e8 238 SUPERFAMILY SSF46785 2 59 3.96E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS02330 dbe6d8f494e0c2a959e96977a0b9417c 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT61_RS02330 dbe6d8f494e0c2a959e96977a0b9417c 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.6E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS02330 dbe6d8f494e0c2a959e96977a0b9417c 215 PANTHER PTHR30328:SF26 1 198 1.0E-34 T 22-04-2016 APT61_RS02330 dbe6d8f494e0c2a959e96977a0b9417c 215 SUPERFAMILY SSF48498 85 198 1.17E-13 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS02330 dbe6d8f494e0c2a959e96977a0b9417c 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.8E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS02330 dbe6d8f494e0c2a959e96977a0b9417c 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.8E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS02330 dbe6d8f494e0c2a959e96977a0b9417c 215 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 201 1.8E-38 T 22-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 APT61_RS02330 dbe6d8f494e0c2a959e96977a0b9417c 215 Gene3D G3DSA:1.10.357.10 61 204 8.0E-19 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS02330 dbe6d8f494e0c2a959e96977a0b9417c 215 Gene3D G3DSA:1.10.10.60 3 60 5.1E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS02330 dbe6d8f494e0c2a959e96977a0b9417c 215 PANTHER PTHR30328 1 198 1.0E-34 T 22-04-2016 APT61_RS02330 dbe6d8f494e0c2a959e96977a0b9417c 215 SUPERFAMILY SSF46689 1 66 2.67E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 PANTHER PTHR23151 124 631 5.6E-273 T 22-04-2016 APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 Pfam PF02817 e3 binding domain 327 362 2.1E-15 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 197 631 8.6E-228 T 22-04-2016 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 128 157 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 229 258 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 SUPERFAMILY SSF52777 389 630 2.76E-80 T 22-04-2016 APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 Gene3D G3DSA:3.30.559.10 390 631 1.0E-83 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 Gene3D G3DSA:2.40.50.100 206 298 7.8E-22 T 22-04-2016 APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 Gene3D G3DSA:2.40.50.100 1 94 6.6E-22 T 22-04-2016 APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 SUPERFAMILY SSF51230 105 197 5.1E-24 T 22-04-2016 IPR011053 Single hybrid motif APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 Pfam PF00364 Biotin-requiring enzyme 208 277 4.5E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 Pfam PF00364 Biotin-requiring enzyme 106 176 2.1E-22 T 22-04-2016 IPR000089 Biotin/lipoyl attachment APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 Pfam PF00364 Biotin-requiring enzyme 4 73 1.5E-21 T 22-04-2016 IPR000089 Biotin/lipoyl attachment APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 SUPERFAMILY SSF51230 207 298 1.57E-23 T 22-04-2016 IPR011053 Single hybrid motif APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 SUPERFAMILY SSF47005 321 366 2.09E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 PANTHER PTHR23151:SF68 124 631 5.6E-273 T 22-04-2016 APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 SUPERFAMILY SSF51230 1 93 1.31E-22 T 22-04-2016 IPR011053 Single hybrid motif APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 400 630 2.3E-79 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 Gene3D G3DSA:2.40.50.100 107 181 2.0E-22 T 22-04-2016 APT61_RS18485 134e41e7c667e44735e6a688d6d39fd0 631 Gene3D G3DSA:4.10.320.10 319 367 2.5E-22 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APT61_RS13895 4befae3edf449e213eb032a456049eb9 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 1.2E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS13895 4befae3edf449e213eb032a456049eb9 211 PANTHER PTHR30055:SF34 6 209 3.6E-90 T 22-04-2016 APT61_RS13895 4befae3edf449e213eb032a456049eb9 211 Gene3D G3DSA:1.10.10.60 12 78 1.1E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS13895 4befae3edf449e213eb032a456049eb9 211 PANTHER PTHR30055 6 209 3.6E-90 T 22-04-2016 APT61_RS13895 4befae3edf449e213eb032a456049eb9 211 Gene3D G3DSA:1.10.357.10 84 210 6.2E-43 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS13895 4befae3edf449e213eb032a456049eb9 211 SUPERFAMILY SSF48498 93 206 2.62E-29 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS13895 4befae3edf449e213eb032a456049eb9 211 SUPERFAMILY SSF46689 12 84 1.95E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 Gene3D G3DSA:3.40.50.300 20 236 3.1E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 Gene3D G3DSA:2.40.30.10 244 359 8.6E-19 T 22-04-2016 APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 28 434 3.7E-210 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 SUPERFAMILY SSF50447 244 328 9.94E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 19 475 53.953 T 22-04-2016 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 34 214 4.0E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 PANTHER PTHR23115 32 54 4.3E-72 T 22-04-2016 APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 PANTHER PTHR23115 74 356 4.3E-72 T 22-04-2016 APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 83 98 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 SUPERFAMILY SSF50465 338 435 3.69E-30 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 SUPERFAMILY SSF52540 21 237 2.78E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 Pfam PF00009 Elongation factor Tu GTP binding domain 27 232 2.3E-43 T 22-04-2016 APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 PRINTS PR00315 GTP-binding elongation factor signature 126 137 8.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 PRINTS PR00315 GTP-binding elongation factor signature 90 98 8.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 PRINTS PR00315 GTP-binding elongation factor signature 163 172 8.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 PRINTS PR00315 GTP-binding elongation factor signature 29 42 8.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS04700 20f35651615e62a8324c8c38adb9758d 475 PRINTS PR00315 GTP-binding elongation factor signature 110 120 8.1E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS04155 5aa9d5a348619f3cfb1571bed3676cd8 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 2.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04155 5aa9d5a348619f3cfb1571bed3676cd8 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 2.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04155 5aa9d5a348619f3cfb1571bed3676cd8 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 403 2.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04155 5aa9d5a348619f3cfb1571bed3676cd8 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 2.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04155 5aa9d5a348619f3cfb1571bed3676cd8 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 2.9E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04155 5aa9d5a348619f3cfb1571bed3676cd8 477 PANTHER PTHR10353:SF35 7 477 9.0E-236 T 22-04-2016 APT61_RS04155 5aa9d5a348619f3cfb1571bed3676cd8 477 SUPERFAMILY SSF51445 2 470 3.57E-165 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS04155 5aa9d5a348619f3cfb1571bed3676cd8 477 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 371 379 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site APT61_RS04155 5aa9d5a348619f3cfb1571bed3676cd8 477 Pfam PF00232 Glycosyl hydrolase family 1 5 474 1.1E-130 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04155 5aa9d5a348619f3cfb1571bed3676cd8 477 Gene3D G3DSA:3.20.20.80 5 476 1.2E-151 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS04155 5aa9d5a348619f3cfb1571bed3676cd8 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site APT61_RS04155 5aa9d5a348619f3cfb1571bed3676cd8 477 PANTHER PTHR10353 7 477 9.0E-236 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS20645 04da43bd8fda8c45a0d7655a2d10259b 262 SMART SM00382 29 229 1.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS20645 04da43bd8fda8c45a0d7655a2d10259b 262 SUPERFAMILY SSF52540 3 241 1.33E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20645 04da43bd8fda8c45a0d7655a2d10259b 262 PANTHER PTHR24220:SF408 6 257 1.4E-121 T 22-04-2016 APT61_RS20645 04da43bd8fda8c45a0d7655a2d10259b 262 Gene3D G3DSA:3.40.50.300 3 242 3.8E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20645 04da43bd8fda8c45a0d7655a2d10259b 262 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 250 3.6E-102 T 22-04-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 APT61_RS20645 04da43bd8fda8c45a0d7655a2d10259b 262 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS20645 04da43bd8fda8c45a0d7655a2d10259b 262 PANTHER PTHR24220 6 257 1.4E-121 T 22-04-2016 APT61_RS20645 04da43bd8fda8c45a0d7655a2d10259b 262 Pfam PF00005 ABC transporter 20 181 1.3E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS21590 abeb0f2b5232f30b3dd0e6cf0dd8914e 266 Gene3D G3DSA:3.90.550.10 3 95 2.5E-10 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS21590 abeb0f2b5232f30b3dd0e6cf0dd8914e 266 Pfam PF00535 Glycosyl transferase family 2 6 91 3.7E-12 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APT61_RS21590 abeb0f2b5232f30b3dd0e6cf0dd8914e 266 PANTHER PTHR10859 3 101 4.0E-12 T 22-04-2016 APT61_RS21590 abeb0f2b5232f30b3dd0e6cf0dd8914e 266 SUPERFAMILY SSF53448 2 102 1.02E-17 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS02690 3eabd11b2657f1f3f62b497ee498c7f1 212 PANTHER PTHR36573 1 212 3.3E-81 T 22-04-2016 APT61_RS02690 3eabd11b2657f1f3f62b497ee498c7f1 212 Gene3D G3DSA:3.10.450.50 114 172 8.3E-17 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS02690 3eabd11b2657f1f3f62b497ee498c7f1 212 Gene3D G3DSA:3.10.450.50 26 70 8.3E-17 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS02690 3eabd11b2657f1f3f62b497ee498c7f1 212 PIRSF PIRSF004649 1 211 2.2E-62 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC APT61_RS02690 3eabd11b2657f1f3f62b497ee498c7f1 212 Gene3D G3DSA:1.10.10.640 173 200 1.2E-21 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical APT61_RS02690 3eabd11b2657f1f3f62b497ee498c7f1 212 Gene3D G3DSA:1.10.10.640 71 111 1.2E-21 T 22-04-2016 IPR023094 Toluene tolerance protein, alpha-helical APT61_RS02690 3eabd11b2657f1f3f62b497ee498c7f1 212 Pfam PF05494 MlaC protein 33 198 1.2E-52 T 22-04-2016 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 PANTHER PTHR24322:SF328 7 135 9.7E-49 T 22-04-2016 APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 PANTHER PTHR24322:SF328 152 184 9.7E-49 T 22-04-2016 APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.6E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.6E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.6E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 243 3.6E-56 T 22-04-2016 APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 PANTHER PTHR24322 7 135 9.7E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 PANTHER PTHR24322 152 184 9.7E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.3E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 3.3E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 3.3E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.3E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 3.3E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 3.3E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 SUPERFAMILY SSF51735 3 245 4.24E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS09025 a2a4258609903e6c790408b8e84cb77f 246 Gene3D G3DSA:3.40.50.720 3 244 2.8E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS14155 1b9112ffa1a6c9cde77c735509462f40 372 Gene3D G3DSA:3.30.9.10 60 145 4.8E-54 T 22-04-2016 APT61_RS14155 1b9112ffa1a6c9cde77c735509462f40 372 Gene3D G3DSA:3.30.9.10 211 313 4.8E-54 T 22-04-2016 APT61_RS14155 1b9112ffa1a6c9cde77c735509462f40 372 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 371 75.304 T 22-04-2016 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 APT61_RS14155 1b9112ffa1a6c9cde77c735509462f40 372 Pfam PF01266 FAD dependent oxidoreductase 4 351 2.8E-44 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APT61_RS14155 1b9112ffa1a6c9cde77c735509462f40 372 SUPERFAMILY SSF51905 313 370 2.4E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS14155 1b9112ffa1a6c9cde77c735509462f40 372 SUPERFAMILY SSF51905 2 216 2.4E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS14155 1b9112ffa1a6c9cde77c735509462f40 372 PANTHER PTHR10961:SF7 1 371 4.9E-115 T 22-04-2016 APT61_RS14155 1b9112ffa1a6c9cde77c735509462f40 372 SUPERFAMILY SSF54373 212 313 1.33E-20 T 22-04-2016 APT61_RS14155 1b9112ffa1a6c9cde77c735509462f40 372 Gene3D G3DSA:3.50.50.60 316 371 3.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS14155 1b9112ffa1a6c9cde77c735509462f40 372 Gene3D G3DSA:3.50.50.60 1 57 3.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS14155 1b9112ffa1a6c9cde77c735509462f40 372 Gene3D G3DSA:3.50.50.60 146 208 3.3E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS14155 1b9112ffa1a6c9cde77c735509462f40 372 PANTHER PTHR10961 1 371 4.9E-115 T 22-04-2016 APT61_RS02005 a359175264d2dce7d0c1a74bbd8cf73f 128 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 1 128 40.555 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 APT61_RS02005 a359175264d2dce7d0c1a74bbd8cf73f 128 Gene3D G3DSA:3.40.1260.10 1 128 1.2E-30 T 22-04-2016 IPR027396 DsrEFH-like APT61_RS02005 a359175264d2dce7d0c1a74bbd8cf73f 128 PANTHER PTHR34874 1 128 3.3E-63 T 22-04-2016 APT61_RS02005 a359175264d2dce7d0c1a74bbd8cf73f 128 PANTHER PTHR34874:SF1 1 128 3.3E-63 T 22-04-2016 APT61_RS02005 a359175264d2dce7d0c1a74bbd8cf73f 128 Pfam PF02635 DsrE/DsrF-like family 1 128 1.3E-30 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein APT61_RS02005 a359175264d2dce7d0c1a74bbd8cf73f 128 SUPERFAMILY SSF75169 1 128 4.51E-39 T 22-04-2016 IPR027396 DsrEFH-like APT61_RS02005 a359175264d2dce7d0c1a74bbd8cf73f 128 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 128 4.2E-54 T 22-04-2016 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 APT61_RS05310 bdfabfa10d1777c6bde37636c7d8cedb 553 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 165 481 3.0E-29 T 22-04-2016 IPR005565 Haemolysin activator HlyB APT61_RS05310 bdfabfa10d1777c6bde37636c7d8cedb 553 PANTHER PTHR34597 1 553 2.3E-230 T 22-04-2016 APT61_RS05310 bdfabfa10d1777c6bde37636c7d8cedb 553 PANTHER PTHR34597:SF2 1 553 2.3E-230 T 22-04-2016 APT61_RS05310 bdfabfa10d1777c6bde37636c7d8cedb 553 Gene3D G3DSA:3.10.20.310 63 144 3.8E-22 T 22-04-2016 APT61_RS05310 bdfabfa10d1777c6bde37636c7d8cedb 553 Pfam PF08479 POTRA domain, ShlB-type 68 144 1.1E-23 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type APT61_RS05310 bdfabfa10d1777c6bde37636c7d8cedb 553 PIRSF PIRSF029745 1 553 3.6E-163 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 APT61_RS05310 bdfabfa10d1777c6bde37636c7d8cedb 553 Gene3D G3DSA:2.40.160.50 175 552 1.3E-127 T 22-04-2016 APT61_RS12215 3d35bf4020aafd03aea25bf7dfa7712c 390 SUPERFAMILY SSF53383 1 385 2.55E-89 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS12215 3d35bf4020aafd03aea25bf7dfa7712c 390 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 384 6.2E-118 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 APT61_RS12215 3d35bf4020aafd03aea25bf7dfa7712c 390 Gene3D G3DSA:3.90.1150.10 241 383 3.7E-54 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS12215 3d35bf4020aafd03aea25bf7dfa7712c 390 PANTHER PTHR11751 5 383 1.0E-237 T 22-04-2016 APT61_RS12215 3d35bf4020aafd03aea25bf7dfa7712c 390 PANTHER PTHR11751:SF361 5 383 1.0E-237 T 22-04-2016 APT61_RS12215 3d35bf4020aafd03aea25bf7dfa7712c 390 Pfam PF00155 Aminotransferase class I and II 30 382 6.5E-59 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS12215 3d35bf4020aafd03aea25bf7dfa7712c 390 Gene3D G3DSA:3.40.640.10 44 240 7.5E-45 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS06215 2ca4614fff86fd2805ad1044081a0591 231 PANTHER PTHR10655:SF17 7 206 5.3E-30 T 22-04-2016 APT61_RS06215 2ca4614fff86fd2805ad1044081a0591 231 PANTHER PTHR10655 7 206 5.3E-30 T 22-04-2016 APT61_RS06215 2ca4614fff86fd2805ad1044081a0591 231 SUPERFAMILY SSF53474 5 204 1.77E-32 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS06215 2ca4614fff86fd2805ad1044081a0591 231 Pfam PF02230 Phospholipase/Carboxylesterase 4 206 3.4E-48 T 22-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 APT61_RS06215 2ca4614fff86fd2805ad1044081a0591 231 Gene3D G3DSA:3.40.50.1820 7 205 2.0E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS12845 aa0fa3cf0c23186cad0c485f689ea664 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 220 280 9.7E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS12845 aa0fa3cf0c23186cad0c485f689ea664 442 Gene3D G3DSA:3.30.565.10 288 433 4.4E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS12845 aa0fa3cf0c23186cad0c485f689ea664 442 SUPERFAMILY SSF47384 213 280 1.02E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS12845 aa0fa3cf0c23186cad0c485f689ea664 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 2.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS12845 aa0fa3cf0c23186cad0c485f689ea664 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 2.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS12845 aa0fa3cf0c23186cad0c485f689ea664 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 2.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS12845 aa0fa3cf0c23186cad0c485f689ea664 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 433 1.0E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS12845 aa0fa3cf0c23186cad0c485f689ea664 442 SMART SM00388 219 287 1.5E-6 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS12845 aa0fa3cf0c23186cad0c485f689ea664 442 PANTHER PTHR24423 198 433 1.2E-39 T 22-04-2016 APT61_RS12845 aa0fa3cf0c23186cad0c485f689ea664 442 PANTHER PTHR24423 28 139 1.2E-39 T 22-04-2016 APT61_RS12845 aa0fa3cf0c23186cad0c485f689ea664 442 SMART SM00387 329 437 1.8E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS12845 aa0fa3cf0c23186cad0c485f689ea664 442 SUPERFAMILY SSF55874 292 433 5.76E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS18680 183a657ec5f8269a2220855b8f7b401e 523 SMART SM00917 369 500 9.1E-37 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS18680 183a657ec5f8269a2220855b8f7b401e 523 PANTHER PTHR10277:SF9 1 508 1.2E-257 T 22-04-2016 APT61_RS18680 183a657ec5f8269a2220855b8f7b401e 523 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS18680 183a657ec5f8269a2220855b8f7b401e 523 SUPERFAMILY SSF51569 1 290 1.9E-97 T 22-04-2016 APT61_RS18680 183a657ec5f8269a2220855b8f7b401e 523 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.51 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS18680 183a657ec5f8269a2220855b8f7b401e 523 PANTHER PTHR10277 1 508 1.2E-257 T 22-04-2016 APT61_RS18680 183a657ec5f8269a2220855b8f7b401e 523 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 2.2E-35 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS18680 183a657ec5f8269a2220855b8f7b401e 523 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 1.8E-254 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS18680 183a657ec5f8269a2220855b8f7b401e 523 SUPERFAMILY SSF110921 391 499 7.59E-26 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS18680 183a657ec5f8269a2220855b8f7b401e 523 Gene3D G3DSA:3.20.20.70 1 347 2.7E-141 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS18680 183a657ec5f8269a2220855b8f7b401e 523 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 APT61_RS18680 183a657ec5f8269a2220855b8f7b401e 523 Pfam PF00682 HMGL-like 4 273 1.4E-103 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 APT61_RS04070 1e537e49d8df4feb3fb9e7f573b7bbd4 211 PANTHER PTHR30086 1 207 4.5E-107 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS04070 1e537e49d8df4feb3fb9e7f573b7bbd4 211 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 39.783 T 22-04-2016 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 APT61_RS04070 1e537e49d8df4feb3fb9e7f573b7bbd4 211 Pfam PF01810 LysE type translocator 14 201 2.5E-55 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS04070 1e537e49d8df4feb3fb9e7f573b7bbd4 211 PANTHER PTHR30086:SF0 1 207 4.5E-107 T 22-04-2016 APT61_RS04070 1e537e49d8df4feb3fb9e7f573b7bbd4 211 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 1.9E-71 T 22-04-2016 IPR004777 L-lysine exporter/arginine exporter GO:0016021 APT61_RS11210 9b4b2be22216017d5f851079b8a0c5ab 173 PANTHER PTHR21366 6 171 1.3E-38 T 22-04-2016 APT61_RS11210 9b4b2be22216017d5f851079b8a0c5ab 173 SUPERFAMILY SSF54593 4 158 2.55E-24 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS11210 9b4b2be22216017d5f851079b8a0c5ab 173 Gene3D G3DSA:3.10.180.10 4 158 1.4E-26 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS11210 9b4b2be22216017d5f851079b8a0c5ab 173 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 125 4.2E-12 T 22-04-2016 APT61_RS11210 9b4b2be22216017d5f851079b8a0c5ab 173 PANTHER PTHR21366:SF16 6 171 1.3E-38 T 22-04-2016 APT61_RS17410 8247e59387ff0b2d352f80341bbabdc4 324 Gene3D G3DSA:3.20.20.100 9 322 1.7E-108 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS17410 8247e59387ff0b2d352f80341bbabdc4 324 PANTHER PTHR11732:SF150 1 217 1.6E-137 T 22-04-2016 APT61_RS17410 8247e59387ff0b2d352f80341bbabdc4 324 PANTHER PTHR11732:SF150 238 323 1.6E-137 T 22-04-2016 APT61_RS17410 8247e59387ff0b2d352f80341bbabdc4 324 PANTHER PTHR11732 1 217 1.6E-137 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS17410 8247e59387ff0b2d352f80341bbabdc4 324 PANTHER PTHR11732 238 323 1.6E-137 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS17410 8247e59387ff0b2d352f80341bbabdc4 324 SUPERFAMILY SSF51430 1 321 2.75E-104 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS17410 8247e59387ff0b2d352f80341bbabdc4 324 Pfam PF00248 Aldo/keto reductase family 15 312 1.9E-78 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS11620 00a2e61ab409719c2186764c39ad7fec 263 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 240 262 9.3E-8 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT61_RS11620 00a2e61ab409719c2186764c39ad7fec 263 Pfam PF00005 ABC transporter 38 192 2.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS11620 00a2e61ab409719c2186764c39ad7fec 263 PANTHER PTHR24220 24 263 3.8E-139 T 22-04-2016 APT61_RS11620 00a2e61ab409719c2186764c39ad7fec 263 PANTHER PTHR24220:SF366 24 263 3.8E-139 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD APT61_RS11620 00a2e61ab409719c2186764c39ad7fec 263 Gene3D G3DSA:3.40.50.300 19 260 2.4E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11620 00a2e61ab409719c2186764c39ad7fec 263 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 22 263 5.5E-113 T 22-04-2016 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD APT61_RS11620 00a2e61ab409719c2186764c39ad7fec 263 SUPERFAMILY SSF52540 20 261 9.53E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05210 cc3bb43cd7f65c9260e16c806aa6d571 186 PANTHER PTHR35892 1 186 4.3E-64 T 22-04-2016 APT61_RS05210 cc3bb43cd7f65c9260e16c806aa6d571 186 SUPERFAMILY SSF56925 26 186 2.88E-26 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS05210 cc3bb43cd7f65c9260e16c806aa6d571 186 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 113 186 2.5E-5 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 APT61_RS05210 cc3bb43cd7f65c9260e16c806aa6d571 186 Gene3D G3DSA:2.40.160.20 24 186 1.4E-37 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS05210 cc3bb43cd7f65c9260e16c806aa6d571 186 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 88 111 2.9E-22 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS05210 cc3bb43cd7f65c9260e16c806aa6d571 186 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 42 54 2.9E-22 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS05210 cc3bb43cd7f65c9260e16c806aa6d571 186 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 144 165 2.9E-22 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS05210 cc3bb43cd7f65c9260e16c806aa6d571 186 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 178 186 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS05210 cc3bb43cd7f65c9260e16c806aa6d571 186 PANTHER PTHR35892:SF1 1 186 4.3E-64 T 22-04-2016 APT61_RS05210 cc3bb43cd7f65c9260e16c806aa6d571 186 Pfam PF06316 Enterobacterial Ail/Lom protein 5 186 1.1E-25 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS03075 3415283e5953dcbc0a5f20ea980623fc 413 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 5 406 35.931 T 22-04-2016 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 APT61_RS03075 3415283e5953dcbc0a5f20ea980623fc 413 Pfam PF00375 Sodium:dicarboxylate symporter family 17 396 3.5E-63 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS03075 3415283e5953dcbc0a5f20ea980623fc 413 PRINTS PR00173 Glutamate-aspartate symporter signature 351 371 1.0E-13 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS03075 3415283e5953dcbc0a5f20ea980623fc 413 PRINTS PR00173 Glutamate-aspartate symporter signature 11 31 1.0E-13 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS03075 3415283e5953dcbc0a5f20ea980623fc 413 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 1.0E-13 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS03075 3415283e5953dcbc0a5f20ea980623fc 413 PRINTS PR00173 Glutamate-aspartate symporter signature 289 315 1.0E-13 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS03075 3415283e5953dcbc0a5f20ea980623fc 413 PRINTS PR00173 Glutamate-aspartate symporter signature 324 343 1.0E-13 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS03075 3415283e5953dcbc0a5f20ea980623fc 413 SUPERFAMILY SSF118215 17 399 3.53E-95 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS03075 3415283e5953dcbc0a5f20ea980623fc 413 PANTHER PTHR11958 9 413 4.3E-264 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS03075 3415283e5953dcbc0a5f20ea980623fc 413 PANTHER PTHR11958:SF68 9 413 4.3E-264 T 22-04-2016 APT61_RS03075 3415283e5953dcbc0a5f20ea980623fc 413 Gene3D G3DSA:1.10.3860.10 12 403 5.6E-84 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS11375 1ef6ca3d6a2635cacc736c3810170103 211 SUPERFAMILY SSF47616 77 211 2.38E-28 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS11375 1ef6ca3d6a2635cacc736c3810170103 211 Gene3D G3DSA:1.20.1050.10 95 210 1.1E-24 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS11375 1ef6ca3d6a2635cacc736c3810170103 211 Gene3D G3DSA:3.40.30.10 8 81 1.3E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS11375 1ef6ca3d6a2635cacc736c3810170103 211 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 APT61_RS11375 1ef6ca3d6a2635cacc736c3810170103 211 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 206 2.1E-63 T 22-04-2016 IPR011901 Glutaredoxin, GrxB GO:0009055|GO:0015035 APT61_RS11375 1ef6ca3d6a2635cacc736c3810170103 211 PANTHER PTHR11260:SF237 1 181 2.6E-48 T 22-04-2016 APT61_RS11375 1ef6ca3d6a2635cacc736c3810170103 211 PANTHER PTHR11260 1 181 2.6E-48 T 22-04-2016 APT61_RS11375 1ef6ca3d6a2635cacc736c3810170103 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 8.8E-11 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APT61_RS11375 1ef6ca3d6a2635cacc736c3810170103 211 Pfam PF04399 Glutaredoxin 2, C terminal domain 86 210 6.1E-29 T 22-04-2016 IPR007494 Glutaredoxin 2, C-terminal APT61_RS11375 1ef6ca3d6a2635cacc736c3810170103 211 SUPERFAMILY SSF52833 1 77 1.18E-18 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS06265 97cf9b8dd310696dfdca1a29d5778a1f 316 PANTHER PTHR10683:SF16 1 316 1.9E-241 T 22-04-2016 APT61_RS06265 97cf9b8dd310696dfdca1a29d5778a1f 316 PANTHER PTHR10683 1 316 1.9E-241 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS06265 97cf9b8dd310696dfdca1a29d5778a1f 316 Pfam PF00923 Transaldolase 13 310 4.1E-99 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS06265 97cf9b8dd310696dfdca1a29d5778a1f 316 Gene3D G3DSA:3.20.20.70 1 315 1.2E-128 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS06265 97cf9b8dd310696dfdca1a29d5778a1f 316 SUPERFAMILY SSF51569 1 315 2.09E-110 T 22-04-2016 APT61_RS06265 97cf9b8dd310696dfdca1a29d5778a1f 316 TIGRFAM TIGR00874 talAB: transaldolase 2 316 2.8E-157 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS06265 97cf9b8dd310696dfdca1a29d5778a1f 316 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS06265 97cf9b8dd310696dfdca1a29d5778a1f 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS06265 97cf9b8dd310696dfdca1a29d5778a1f 316 Hamap MF_00492 Transaldolase [tal]. 1 316 51.903 T 22-04-2016 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS04295 434f0f4313cb3ad46e5bc8d705292d4b 391 SUPERFAMILY SSF82171 185 383 9.94E-29 T 22-04-2016 APT61_RS04295 434f0f4313cb3ad46e5bc8d705292d4b 391 SUPERFAMILY SSF82171 16 133 9.94E-29 T 22-04-2016 APT61_RS04295 434f0f4313cb3ad46e5bc8d705292d4b 391 Pfam PF14583 Oligogalacturonate lyase 1 385 6.5E-213 T 22-04-2016 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6|UniPathway: UPA00545 APT61_RS04295 434f0f4313cb3ad46e5bc8d705292d4b 391 Gene3D G3DSA:2.130.10.10 10 383 3.7E-73 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APT61_RS10460 dbbdd15725d137302c2d4ac4b02eceb3 327 Pfam PF08908 Domain of unknown function (DUF1852) 2 323 9.0E-182 T 22-04-2016 IPR015004 Protein of unknown function DUF1852 APT61_RS10460 dbbdd15725d137302c2d4ac4b02eceb3 327 PIRSF PIRSF034367 1 327 6.5E-192 T 22-04-2016 IPR015004 Protein of unknown function DUF1852 APT61_RS17890 3ac9f86634658cadf3af65f32297d260 158 SUPERFAMILY SSF54427 5 158 9.92E-78 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS17890 3ac9f86634658cadf3af65f32297d260 158 PANTHER PTHR31757 2 158 1.7E-86 T 22-04-2016 APT61_RS17890 3ac9f86634658cadf3af65f32297d260 158 Gene3D G3DSA:3.10.450.50 15 156 9.2E-73 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS17890 3ac9f86634658cadf3af65f32297d260 158 Pfam PF07080 Protein of unknown function (DUF1348) 7 148 1.3E-69 T 22-04-2016 IPR009783 Protein of unknown function DUF1348 APT61_RS17890 3ac9f86634658cadf3af65f32297d260 158 PANTHER PTHR31757:SF0 2 158 1.7E-86 T 22-04-2016 APT61_RS13580 d2c937c291dd72d93ad03c565119b7ae 236 Gene3D G3DSA:3.90.1720.10 123 233 2.2E-14 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS13580 d2c937c291dd72d93ad03c565119b7ae 236 SUPERFAMILY SSF54001 109 233 3.19E-16 T 22-04-2016 APT61_RS13580 d2c937c291dd72d93ad03c565119b7ae 236 PANTHER PTHR34858:SF1 1 235 2.0E-53 T 22-04-2016 APT61_RS13580 d2c937c291dd72d93ad03c565119b7ae 236 SUPERFAMILY SSF102712 2 127 3.27E-23 T 22-04-2016 APT61_RS13580 d2c937c291dd72d93ad03c565119b7ae 236 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 99 1.7E-17 T 22-04-2016 IPR028090 JAB domain, prokaryotic APT61_RS13580 d2c937c291dd72d93ad03c565119b7ae 236 Pfam PF00877 NlpC/P60 family 117 231 2.8E-21 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS13580 d2c937c291dd72d93ad03c565119b7ae 236 Gene3D G3DSA:3.40.140.10 1 122 1.9E-27 T 22-04-2016 APT61_RS13580 d2c937c291dd72d93ad03c565119b7ae 236 SMART SM00232 1 124 9.0E-18 T 22-04-2016 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 APT61_RS13580 d2c937c291dd72d93ad03c565119b7ae 236 PANTHER PTHR34858 1 235 2.0E-53 T 22-04-2016 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 PANTHER PTHR21091:SF16 165 442 2.2E-84 T 22-04-2016 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 Pfam PF10414 Sirohaem synthase dimerisation region 150 207 3.5E-18 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 Gene3D G3DSA:3.30.160.110 113 148 1.8E-19 T 22-04-2016 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 Pfam PF13241 Putative NAD(P)-binding 6 115 7.6E-26 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 8.8E-9 T 22-04-2016 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 Gene3D G3DSA:3.40.1010.10 215 331 1.6E-45 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.8 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 PANTHER PTHR21091 165 442 2.2E-84 T 22-04-2016 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 3.8E-91 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 PIRSF PIRSF036426 1 457 5.6E-204 T 22-04-2016 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 Gene3D G3DSA:1.10.8.210 149 212 2.2E-23 T 22-04-2016 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 Gene3D G3DSA:3.30.950.10 332 456 1.3E-46 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 204 9.7E-71 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 SUPERFAMILY SSF53790 215 456 1.7E-77 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 Gene3D G3DSA:3.40.50.720 2 112 4.4E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 426 2.7E-47 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 SUPERFAMILY SSF75615 114 207 1.57E-27 T 22-04-2016 APT61_RS01840 e1e11a117e8a50ec18b73e93329e2152 457 SUPERFAMILY SSF51735 2 112 4.38E-26 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05555 52be14861ba6e3c369bdb29cf91fddfc 553 PIRSF PIRSF003128 1 553 2.3E-156 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APT61_RS05555 52be14861ba6e3c369bdb29cf91fddfc 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 2.2E-167 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APT61_RS05555 52be14861ba6e3c369bdb29cf91fddfc 553 SUPERFAMILY SSF52540 284 506 4.75E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05555 52be14861ba6e3c369bdb29cf91fddfc 553 Gene3D G3DSA:3.40.50.300 333 385 4.7E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05555 52be14861ba6e3c369bdb29cf91fddfc 553 Gene3D G3DSA:3.40.50.300 431 495 4.7E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05555 52be14861ba6e3c369bdb29cf91fddfc 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 507 2.2E-17 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APT61_RS05555 52be14861ba6e3c369bdb29cf91fddfc 553 SUPERFAMILY SSF52540 1 217 2.12E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05555 52be14861ba6e3c369bdb29cf91fddfc 553 Gene3D G3DSA:3.40.50.300 1 206 7.6E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05555 52be14861ba6e3c369bdb29cf91fddfc 553 SUPERFAMILY SSF52540 4 50 4.75E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05555 52be14861ba6e3c369bdb29cf91fddfc 553 PANTHER PTHR11059 2 553 1.2E-185 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 APT61_RS20220 799e300313d8bf8c75552b54ae45255e 104 Gene3D G3DSA:2.40.50.140 1 103 1.8E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS20220 799e300313d8bf8c75552b54ae45255e 104 SUPERFAMILY SSF50249 1 103 9.94E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS20220 799e300313d8bf8c75552b54ae45255e 104 Hamap MF_00720 Primosomal replication protein n [priB]. 1 100 30.199 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 APT61_RS20220 799e300313d8bf8c75552b54ae45255e 104 Pfam PF00436 Single-strand binding protein family 3 86 2.0E-12 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APT61_RS20220 799e300313d8bf8c75552b54ae45255e 104 PIRSF PIRSF003135 1 101 1.1E-49 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 APT61_RS20220 799e300313d8bf8c75552b54ae45255e 104 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 99 6.1E-36 T 22-04-2016 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 APT61_RS09140 a5e506054e9fe29d90f25b94d848ce0b 686 SUPERFAMILY SSF52317 397 611 1.53E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS09140 a5e506054e9fe29d90f25b94d848ce0b 686 PANTHER PTHR36447 10 686 2.7E-239 T 22-04-2016 APT61_RS09140 a5e506054e9fe29d90f25b94d848ce0b 686 Pfam PF02449 Beta-galactosidase 15 389 3.7E-147 T 22-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS09140 a5e506054e9fe29d90f25b94d848ce0b 686 PANTHER PTHR36447:SF1 10 686 2.7E-239 T 22-04-2016 APT61_RS09140 a5e506054e9fe29d90f25b94d848ce0b 686 SUPERFAMILY SSF51445 8 368 2.48E-110 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS09140 a5e506054e9fe29d90f25b94d848ce0b 686 PIRSF PIRSF001084 6 683 2.7E-238 T 22-04-2016 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS09140 a5e506054e9fe29d90f25b94d848ce0b 686 Pfam PF08532 Beta-galactosidase trimerisation domain 399 611 7.1E-74 T 22-04-2016 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS09140 a5e506054e9fe29d90f25b94d848ce0b 686 Gene3D G3DSA:3.20.20.80 12 392 1.5E-125 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS09140 a5e506054e9fe29d90f25b94d848ce0b 686 Gene3D G3DSA:3.40.50.880 398 612 3.4E-62 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS09140 a5e506054e9fe29d90f25b94d848ce0b 686 Pfam PF08533 Beta-galactosidase C-terminal domain 622 681 2.3E-5 T 22-04-2016 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS14720 acc8cb5e4b348568dd1a5d7d6940eb4e 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 170 371 4.1E-30 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 APT61_RS14720 acc8cb5e4b348568dd1a5d7d6940eb4e 396 SUPERFAMILY SSF53335 79 392 2.61E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS14720 acc8cb5e4b348568dd1a5d7d6940eb4e 396 Gene3D G3DSA:3.40.50.150 185 395 2.4E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS14720 acc8cb5e4b348568dd1a5d7d6940eb4e 396 Gene3D G3DSA:2.30.130.10 4 72 8.4E-28 T 22-04-2016 IPR015947 PUA-like domain APT61_RS14720 acc8cb5e4b348568dd1a5d7d6940eb4e 396 PANTHER PTHR11061 7 396 4.6E-125 T 22-04-2016 APT61_RS14720 acc8cb5e4b348568dd1a5d7d6940eb4e 396 SMART SM00359 3 88 6.3E-19 T 22-04-2016 IPR002478 PUA domain GO:0003723 APT61_RS14720 acc8cb5e4b348568dd1a5d7d6940eb4e 396 Gene3D G3DSA:3.30.750.80 73 180 5.5E-35 T 22-04-2016 APT61_RS14720 acc8cb5e4b348568dd1a5d7d6940eb4e 396 SUPERFAMILY SSF88697 4 72 2.18E-17 T 22-04-2016 IPR015947 PUA-like domain APT61_RS14720 acc8cb5e4b348568dd1a5d7d6940eb4e 396 PANTHER PTHR11061:SF12 7 396 4.6E-125 T 22-04-2016 APT61_RS14720 acc8cb5e4b348568dd1a5d7d6940eb4e 396 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 70.525 T 22-04-2016 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS15925 4bf16e5e4164b5e900f53ec0fd2e2f0d 262 SUPERFAMILY SSF50331 123 193 8.99E-19 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APT61_RS15925 4bf16e5e4164b5e900f53ec0fd2e2f0d 262 Pfam PF03459 TOBE domain 199 257 4.8E-10 T 22-04-2016 IPR005116 Transport-associated OB, type 1 APT61_RS15925 4bf16e5e4164b5e900f53ec0fd2e2f0d 262 Pfam PF03459 TOBE domain 125 188 4.6E-12 T 22-04-2016 IPR005116 Transport-associated OB, type 1 APT61_RS15925 4bf16e5e4164b5e900f53ec0fd2e2f0d 262 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 113 8.8E-40 T 22-04-2016 IPR003725 Molybdenum-binding protein ModE, N-terminal APT61_RS15925 4bf16e5e4164b5e900f53ec0fd2e2f0d 262 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 2.1E-14 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS15925 4bf16e5e4164b5e900f53ec0fd2e2f0d 262 Gene3D G3DSA:2.40.50.100 120 184 3.1E-31 T 22-04-2016 APT61_RS15925 4bf16e5e4164b5e900f53ec0fd2e2f0d 262 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 123 192 2.3E-27 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 APT61_RS15925 4bf16e5e4164b5e900f53ec0fd2e2f0d 262 PIRSF PIRSF005763 1 262 1.2E-99 T 22-04-2016 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 APT61_RS15925 4bf16e5e4164b5e900f53ec0fd2e2f0d 262 Gene3D G3DSA:2.40.50.100 185 252 9.0E-21 T 22-04-2016 APT61_RS15925 4bf16e5e4164b5e900f53ec0fd2e2f0d 262 SUPERFAMILY SSF46785 2 106 1.9E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15925 4bf16e5e4164b5e900f53ec0fd2e2f0d 262 Gene3D G3DSA:1.10.10.10 1 119 9.0E-44 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15925 4bf16e5e4164b5e900f53ec0fd2e2f0d 262 SUPERFAMILY SSF50331 200 259 8.99E-13 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APT61_RS15925 4bf16e5e4164b5e900f53ec0fd2e2f0d 262 PANTHER PTHR30432 1 262 2.8E-72 T 22-04-2016 APT61_RS09615 5884f37683856c862c06135a38d866d0 289 Pfam PF00378 Enoyl-CoA hydratase/isomerase 118 207 8.7E-14 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APT61_RS09615 5884f37683856c862c06135a38d866d0 289 PANTHER PTHR11941:SF54 253 259 9.2E-15 T 22-04-2016 APT61_RS09615 5884f37683856c862c06135a38d866d0 289 PANTHER PTHR11941:SF54 123 209 9.2E-15 T 22-04-2016 APT61_RS09615 5884f37683856c862c06135a38d866d0 289 PANTHER PTHR11941 253 259 9.2E-15 T 22-04-2016 APT61_RS09615 5884f37683856c862c06135a38d866d0 289 PANTHER PTHR11941 123 209 9.2E-15 T 22-04-2016 APT61_RS09615 5884f37683856c862c06135a38d866d0 289 Gene3D G3DSA:3.90.226.10 37 258 5.3E-28 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS09615 5884f37683856c862c06135a38d866d0 289 SUPERFAMILY SSF52096 26 261 2.02E-30 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS03525 0156e4a9ba18f5b0f42c5674a4c10c21 413 Pfam PF01966 HD domain 229 328 2.6E-13 T 22-04-2016 IPR006674 HD domain APT61_RS03525 0156e4a9ba18f5b0f42c5674a4c10c21 413 PANTHER PTHR13734 1 298 3.3E-77 T 22-04-2016 APT61_RS03525 0156e4a9ba18f5b0f42c5674a4c10c21 413 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.069 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 APT61_RS03525 0156e4a9ba18f5b0f42c5674a4c10c21 413 Gene3D G3DSA:1.10.3090.10 122 359 2.0E-56 T 22-04-2016 APT61_RS03525 0156e4a9ba18f5b0f42c5674a4c10c21 413 PIRSF PIRSF000813 1 408 5.5E-204 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 APT61_RS03525 0156e4a9ba18f5b0f42c5674a4c10c21 413 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 53.672 T 22-04-2016 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 APT61_RS03525 0156e4a9ba18f5b0f42c5674a4c10c21 413 SUPERFAMILY SSF81891 120 402 1.15E-56 T 22-04-2016 APT61_RS03525 0156e4a9ba18f5b0f42c5674a4c10c21 413 Pfam PF01743 Poly A polymerase head domain 3 122 1.1E-18 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 APT61_RS03525 0156e4a9ba18f5b0f42c5674a4c10c21 413 SUPERFAMILY SSF81301 2 119 4.36E-30 T 22-04-2016 APT61_RS03525 0156e4a9ba18f5b0f42c5674a4c10c21 413 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 3.9E-15 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain APT61_RS03525 0156e4a9ba18f5b0f42c5674a4c10c21 413 Gene3D G3DSA:3.30.460.10 2 121 1.9E-30 T 22-04-2016 APT61_RS03525 0156e4a9ba18f5b0f42c5674a4c10c21 413 SMART SM00471 224 338 0.0046 T 22-04-2016 IPR003607 HD/PDEase domain APT61_RS08830 26e4e09ecfec05635942887dc63653ff 450 SUPERFAMILY SSF56322 4 448 6.67E-138 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APT61_RS08830 26e4e09ecfec05635942887dc63653ff 450 Pfam PF00425 chorismate binding enzyme 188 440 5.7E-88 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APT61_RS08830 26e4e09ecfec05635942887dc63653ff 450 PRINTS PR00095 Anthranilate synthase component I signature 382 396 5.9E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APT61_RS08830 26e4e09ecfec05635942887dc63653ff 450 PRINTS PR00095 Anthranilate synthase component I signature 302 315 5.9E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APT61_RS08830 26e4e09ecfec05635942887dc63653ff 450 PRINTS PR00095 Anthranilate synthase component I signature 288 301 5.9E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APT61_RS08830 26e4e09ecfec05635942887dc63653ff 450 PRINTS PR00095 Anthranilate synthase component I signature 397 411 5.9E-17 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APT61_RS08830 26e4e09ecfec05635942887dc63653ff 450 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 103 444 1.1E-127 T 22-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 APT61_RS08830 26e4e09ecfec05635942887dc63653ff 450 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 149 2.9E-22 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APT61_RS08830 26e4e09ecfec05635942887dc63653ff 450 Gene3D G3DSA:3.60.120.10 16 449 3.2E-144 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APT61_RS08830 26e4e09ecfec05635942887dc63653ff 450 PANTHER PTHR11236 29 449 3.8E-158 T 22-04-2016 APT61_RS08830 26e4e09ecfec05635942887dc63653ff 450 PANTHER PTHR11236:SF18 29 449 3.8E-158 T 22-04-2016 APT61_RS09885 eb745ef36db4b9ecef37fa07927ebcbb 587 Pfam PF05947 Type VI secretion system, ImpG, VasA, VC_A0110 6 582 9.2E-187 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like APT61_RS09885 eb745ef36db4b9ecef37fa07927ebcbb 587 PANTHER PTHR35370:SF4 2 587 3.1E-242 T 22-04-2016 APT61_RS09885 eb745ef36db4b9ecef37fa07927ebcbb 587 PANTHER PTHR35370 2 587 3.1E-242 T 22-04-2016 APT61_RS09885 eb745ef36db4b9ecef37fa07927ebcbb 587 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 581 5.3E-170 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like APT61_RS09885 eb745ef36db4b9ecef37fa07927ebcbb 587 PIRSF PIRSF028304 1 586 2.8E-161 T 22-04-2016 IPR010272 Type VI secretion system, TssF-like APT61_RS03065 5ff5ecadd7452eea0ff51c254389844b 470 Pfam PF02614 Glucuronate isomerase 1 465 2.0E-228 T 22-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APT61_RS03065 5ff5ecadd7452eea0ff51c254389844b 470 SUPERFAMILY SSF51556 3 465 1.93E-182 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS03065 5ff5ecadd7452eea0ff51c254389844b 470 PANTHER PTHR30068 2 469 6.6E-304 T 22-04-2016 APT61_RS03065 5ff5ecadd7452eea0ff51c254389844b 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 50.184 T 22-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APT61_RS03065 5ff5ecadd7452eea0ff51c254389844b 470 Gene3D G3DSA:3.20.20.140 4 44 1.4E-163 T 22-04-2016 APT61_RS03065 5ff5ecadd7452eea0ff51c254389844b 470 Gene3D G3DSA:3.20.20.140 139 466 1.4E-163 T 22-04-2016 APT61_RS03065 5ff5ecadd7452eea0ff51c254389844b 470 PANTHER PTHR30068:SF4 2 469 6.6E-304 T 22-04-2016 APT61_RS03065 5ff5ecadd7452eea0ff51c254389844b 470 Gene3D G3DSA:1.10.2020.10 46 137 3.8E-44 T 22-04-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 APT61_RS11140 86000caa0d26358b72d966ca5192f3f9 535 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS11140 86000caa0d26358b72d966ca5192f3f9 535 ProSitePatterns PS00211 ABC transporters family signature. 421 435 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS11140 86000caa0d26358b72d966ca5192f3f9 535 SUPERFAMILY SSF52540 277 520 5.64E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11140 86000caa0d26358b72d966ca5192f3f9 535 PANTHER PTHR24220:SF574 5 406 3.7E-132 T 22-04-2016 APT61_RS11140 86000caa0d26358b72d966ca5192f3f9 535 PANTHER PTHR24220 5 406 3.7E-132 T 22-04-2016 APT61_RS11140 86000caa0d26358b72d966ca5192f3f9 535 SMART SM00382 306 506 9.8E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS11140 86000caa0d26358b72d966ca5192f3f9 535 SMART SM00382 32 231 3.7E-21 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS11140 86000caa0d26358b72d966ca5192f3f9 535 SUPERFAMILY SSF52540 3 253 1.41E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11140 86000caa0d26358b72d966ca5192f3f9 535 Gene3D G3DSA:3.40.50.300 2 254 1.1E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11140 86000caa0d26358b72d966ca5192f3f9 535 Gene3D G3DSA:3.40.50.300 275 522 2.8E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11140 86000caa0d26358b72d966ca5192f3f9 535 Pfam PF00005 ABC transporter 24 182 7.4E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS11140 86000caa0d26358b72d966ca5192f3f9 535 Pfam PF00005 ABC transporter 297 449 7.6E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS11140 86000caa0d26358b72d966ca5192f3f9 535 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 255 0.13 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS11140 86000caa0d26358b72d966ca5192f3f9 535 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 500 528 0.032 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS03375 a58f5017d26216ac331ba5319ad723ae 302 Pfam PF04865 Baseplate J-like protein 118 259 1.5E-25 T 22-04-2016 IPR006949 Baseplate protein J-like APT61_RS03375 a58f5017d26216ac331ba5319ad723ae 302 PANTHER PTHR35862:SF1 1 302 8.1E-141 T 22-04-2016 APT61_RS03375 a58f5017d26216ac331ba5319ad723ae 302 PIRSF PIRSF020481 1 302 9.9E-125 T 22-04-2016 IPR014507 Baseplate assembly protein J, predicted APT61_RS03375 a58f5017d26216ac331ba5319ad723ae 302 PANTHER PTHR35862 1 302 8.1E-141 T 22-04-2016 APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 SMART SM00487 9 425 8.4E-28 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 SUPERFAMILY SSF46600 622 667 1.57E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 SUPERFAMILY SSF52540 37 82 1.23E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 666 44.056 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 Pfam PF02151 UvrB/uvrC motif 632 665 1.1E-7 T 22-04-2016 IPR001943 UVR domain GO:0005515 APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 PANTHER PTHR24029 1 670 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 Pfam PF12344 Ultra-violet resistance protein B 552 593 7.2E-22 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 SUPERFAMILY SSF52540 3 415 8.59E-136 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 Gene3D G3DSA:4.10.860.10 626 669 4.3E-19 T 22-04-2016 IPR001943 UVR domain GO:0005515 APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 Gene3D G3DSA:3.40.50.300 388 408 4.6E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 Gene3D G3DSA:3.40.50.300 278 338 4.6E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 Gene3D G3DSA:3.40.50.300 5 89 4.6E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 664 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 SMART SM00490 460 546 1.9E-20 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 Pfam PF00271 Helicase conserved C-terminal domain 435 545 1.2E-18 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 Gene3D G3DSA:3.30.2060.10 159 230 1.0E-10 T 22-04-2016 APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 Gene3D G3DSA:3.40.50.300 419 582 1.9E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 Pfam PF04851 Type III restriction enzyme, res subunit 16 92 2.9E-9 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APT61_RS15830 23dbd88816f79751be3b5f2a171e26e6 671 SUPERFAMILY SSF52540 459 581 1.23E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00225 084918aa29ad4ab352d52031a792cac9 298 PRINTS PR00990 Ribokinase signature 209 220 8.4E-7 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APT61_RS00225 084918aa29ad4ab352d52031a792cac9 298 PRINTS PR00990 Ribokinase signature 33 52 8.4E-7 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APT61_RS00225 084918aa29ad4ab352d52031a792cac9 298 PRINTS PR00990 Ribokinase signature 6 27 8.4E-7 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 APT61_RS00225 084918aa29ad4ab352d52031a792cac9 298 PANTHER PTHR10584:SF157 1 298 2.3E-133 T 22-04-2016 APT61_RS00225 084918aa29ad4ab352d52031a792cac9 298 Hamap MF_00999 Sulfofructose kinase. 1 298 61.823 T 22-04-2016 IPR030877 Sulfofructose kinase GO:0061594 MetaCyc: PWY-7446 APT61_RS00225 084918aa29ad4ab352d52031a792cac9 298 Pfam PF00294 pfkB family carbohydrate kinase 1 286 2.5E-63 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APT61_RS00225 084918aa29ad4ab352d52031a792cac9 298 PANTHER PTHR10584 1 298 2.3E-133 T 22-04-2016 APT61_RS00225 084918aa29ad4ab352d52031a792cac9 298 SUPERFAMILY SSF53613 1 293 1.48E-69 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS00225 084918aa29ad4ab352d52031a792cac9 298 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 238 251 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APT61_RS00225 084918aa29ad4ab352d52031a792cac9 298 Gene3D G3DSA:3.40.1190.20 2 295 1.9E-84 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 PANTHER PTHR11353 2 548 1.1E-253 T 22-04-2016 APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 SUPERFAMILY SSF54849 137 203 1.79E-24 T 22-04-2016 APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 SUPERFAMILY SSF48592 406 521 1.22E-76 T 22-04-2016 APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 SUPERFAMILY SSF48592 7 134 1.22E-76 T 22-04-2016 APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 Gene3D G3DSA:1.10.560.10 369 518 1.8E-40 T 22-04-2016 IPR027413 GroEL-like equatorial domain APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 Gene3D G3DSA:1.10.560.10 3 188 5.5E-47 T 22-04-2016 IPR027413 GroEL-like equatorial domain APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 2.8E-95 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 SUPERFAMILY SSF52029 184 376 4.01E-83 T 22-04-2016 IPR027409 GroEL-like apical domain APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.674 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 Gene3D G3DSA:3.50.7.10 189 368 1.0E-98 T 22-04-2016 IPR027409 GroEL-like apical domain APT61_RS20485 b8f755980bfeaf9e559bc234e8241cd6 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.4E-256 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 1 422 33.82 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 PANTHER PTHR21256 24 428 1.1E-162 T 22-04-2016 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 PRINTS PR00083 Histidinol dehydrogenase signature 224 245 1.0E-71 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 PRINTS PR00083 Histidinol dehydrogenase signature 106 133 1.0E-71 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 PRINTS PR00083 Histidinol dehydrogenase signature 246 265 1.0E-71 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 PRINTS PR00083 Histidinol dehydrogenase signature 315 340 1.0E-71 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 PRINTS PR00083 Histidinol dehydrogenase signature 356 374 1.0E-71 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.0E-71 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.0E-71 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 PRINTS PR00083 Histidinol dehydrogenase signature 31 55 1.0E-71 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 Gene3D G3DSA:3.40.50.1980 219 367 2.4E-55 T 22-04-2016 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 Pfam PF00815 Histidinol dehydrogenase 21 422 2.1E-139 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 31 421 4.6E-136 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 Gene3D G3DSA:3.40.50.1980 25 218 1.3E-73 T 22-04-2016 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 PIRSF PIRSF000099 4 424 4.6E-125 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12775 951609d94d9b985086bec05ec9deb125 436 SUPERFAMILY SSF53720 25 422 1.08E-69 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS02635 4612b743486318065433dcf5babb3df7 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 3.2E-27 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APT61_RS02635 4612b743486318065433dcf5babb3df7 95 SUPERFAMILY SSF69754 1 95 4.97E-33 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APT61_RS02635 4612b743486318065433dcf5babb3df7 95 Gene3D G3DSA:3.30.160.100 1 95 3.2E-37 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APT61_RS02635 4612b743486318065433dcf5babb3df7 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 1.9E-36 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APT61_RS02635 4612b743486318065433dcf5babb3df7 95 PANTHER PTHR33231 1 95 1.8E-41 T 22-04-2016 APT61_RS01005 74904ce498e7f4fbb1563ae3d4a2e1be 155 PANTHER PTHR12418 7 154 2.4E-88 T 22-04-2016 APT61_RS01005 74904ce498e7f4fbb1563ae3d4a2e1be 155 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 153 1.9E-14 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain APT61_RS01005 74904ce498e7f4fbb1563ae3d4a2e1be 155 PANTHER PTHR12418:SF35 7 154 2.4E-88 T 22-04-2016 APT61_RS01005 74904ce498e7f4fbb1563ae3d4a2e1be 155 Gene3D G3DSA:3.10.129.10 18 154 1.9E-30 T 22-04-2016 IPR029069 HotDog domain APT61_RS01005 74904ce498e7f4fbb1563ae3d4a2e1be 155 SUPERFAMILY SSF54637 11 154 2.26E-25 T 22-04-2016 IPR029069 HotDog domain APT61_RS01005 74904ce498e7f4fbb1563ae3d4a2e1be 155 Pfam PF03061 Thioesterase superfamily 57 145 1.7E-18 T 22-04-2016 IPR006683 Thioesterase domain APT61_RS09415 a4528974a056a28de43a2df3aa7ff5aa 337 Pfam PF00005 ABC transporter 40 196 1.2E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS09415 a4528974a056a28de43a2df3aa7ff5aa 337 SMART SM00382 48 254 3.5E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS09415 a4528974a056a28de43a2df3aa7ff5aa 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 330 2.2E-25 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS09415 a4528974a056a28de43a2df3aa7ff5aa 337 Gene3D G3DSA:3.40.50.300 12 276 1.9E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09415 a4528974a056a28de43a2df3aa7ff5aa 337 PANTHER PTHR24220 21 330 3.4E-161 T 22-04-2016 APT61_RS09415 a4528974a056a28de43a2df3aa7ff5aa 337 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS09415 a4528974a056a28de43a2df3aa7ff5aa 337 SUPERFAMILY SSF52540 49 316 8.43E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09415 a4528974a056a28de43a2df3aa7ff5aa 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 312 4.3E-21 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS09415 a4528974a056a28de43a2df3aa7ff5aa 337 PANTHER PTHR24220:SF535 21 330 3.4E-161 T 22-04-2016 APT61_RS15690 f0289503ab996049e9d18a4da166023e 761 Gene3D G3DSA:2.40.170.20 185 761 1.7E-144 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS15690 f0289503ab996049e9d18a4da166023e 761 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 70 761 5.7E-80 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APT61_RS15690 f0289503ab996049e9d18a4da166023e 761 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 49 - T 22-04-2016 IPR010916 TonB box, conserved site APT61_RS15690 f0289503ab996049e9d18a4da166023e 761 Gene3D G3DSA:2.170.130.10 33 178 3.7E-31 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS15690 f0289503ab996049e9d18a4da166023e 761 Pfam PF00593 TonB dependent receptor 515 759 1.2E-34 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS15690 f0289503ab996049e9d18a4da166023e 761 SUPERFAMILY SSF56935 40 761 4.19E-120 T 22-04-2016 APT61_RS15690 f0289503ab996049e9d18a4da166023e 761 PANTHER PTHR32552:SF8 498 761 1.7E-286 T 22-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 APT61_RS15690 f0289503ab996049e9d18a4da166023e 761 PANTHER PTHR32552:SF8 3 479 1.7E-286 T 22-04-2016 IPR030148 Catecholate siderophore receptor Fiu GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 APT61_RS15690 f0289503ab996049e9d18a4da166023e 761 Pfam PF07715 TonB-dependent Receptor Plug Domain 69 168 2.3E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS15690 f0289503ab996049e9d18a4da166023e 761 PANTHER PTHR32552 498 761 1.7E-286 T 22-04-2016 APT61_RS15690 f0289503ab996049e9d18a4da166023e 761 PANTHER PTHR32552 3 479 1.7E-286 T 22-04-2016 APT61_RS05620 06ae06aacf9c9bed19db744e1d70d99b 406 Pfam PF00990 Diguanylate cyclase, GGDEF domain 248 401 3.1E-39 T 22-04-2016 IPR000160 GGDEF domain APT61_RS05620 06ae06aacf9c9bed19db744e1d70d99b 406 PANTHER PTHR10799 280 400 1.8E-19 T 22-04-2016 APT61_RS05620 06ae06aacf9c9bed19db744e1d70d99b 406 PANTHER PTHR10799 15 73 1.8E-19 T 22-04-2016 APT61_RS05620 06ae06aacf9c9bed19db744e1d70d99b 406 Gene3D G3DSA:3.30.70.270 249 401 2.8E-40 T 22-04-2016 APT61_RS05620 06ae06aacf9c9bed19db744e1d70d99b 406 SMART SM00267 237 405 1.1E-41 T 22-04-2016 IPR000160 GGDEF domain APT61_RS05620 06ae06aacf9c9bed19db744e1d70d99b 406 SUPERFAMILY SSF55073 253 401 3.37E-35 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS05620 06ae06aacf9c9bed19db744e1d70d99b 406 Pfam PF17152 Periplasmic sensor domain 44 144 9.1E-27 T 22-04-2016 IPR033417 Periplasmic sensor domain CHASE8 UniPathway: UPA00599 APT61_RS05620 06ae06aacf9c9bed19db744e1d70d99b 406 PANTHER PTHR10799:SF774 280 400 1.8E-19 T 22-04-2016 APT61_RS05620 06ae06aacf9c9bed19db744e1d70d99b 406 PANTHER PTHR10799:SF774 15 73 1.8E-19 T 22-04-2016 APT61_RS05620 06ae06aacf9c9bed19db744e1d70d99b 406 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 245 401 3.3E-30 T 22-04-2016 IPR000160 GGDEF domain APT61_RS01715 ecd8b7a272890338296ad4e2b46bb66d 772 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 687 2.1E-241 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APT61_RS01715 ecd8b7a272890338296ad4e2b46bb66d 772 PANTHER PTHR11649 1 150 6.2E-288 T 22-04-2016 APT61_RS01715 ecd8b7a272890338296ad4e2b46bb66d 772 PANTHER PTHR11649 262 612 6.2E-288 T 22-04-2016 APT61_RS01715 ecd8b7a272890338296ad4e2b46bb66d 772 PANTHER PTHR11649 658 725 6.2E-288 T 22-04-2016 APT61_RS01715 ecd8b7a272890338296ad4e2b46bb66d 772 Pfam PF02421 Ferrous iron transport protein B 5 162 1.8E-64 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 APT61_RS01715 ecd8b7a272890338296ad4e2b46bb66d 772 SUPERFAMILY SSF52540 4 169 3.99E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01715 ecd8b7a272890338296ad4e2b46bb66d 772 Pfam PF07670 Nucleoside recognition 512 689 8.1E-37 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APT61_RS01715 ecd8b7a272890338296ad4e2b46bb66d 772 Pfam PF07670 Nucleoside recognition 353 443 6.1E-13 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APT61_RS01715 ecd8b7a272890338296ad4e2b46bb66d 772 Pfam PF07664 Ferrous iron transport protein B C terminus 455 507 4.1E-22 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 APT61_RS01715 ecd8b7a272890338296ad4e2b46bb66d 772 PANTHER PTHR11649:SF37 1 150 6.2E-288 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APT61_RS01715 ecd8b7a272890338296ad4e2b46bb66d 772 PANTHER PTHR11649:SF37 262 612 6.2E-288 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APT61_RS01715 ecd8b7a272890338296ad4e2b46bb66d 772 PANTHER PTHR11649:SF37 658 725 6.2E-288 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 APT61_RS01715 ecd8b7a272890338296ad4e2b46bb66d 772 Gene3D G3DSA:3.40.50.300 3 170 6.8E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 SUPERFAMILY SSF47781 521 608 6.67E-18 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 PANTHER PTHR30562:SF1 9 608 3.3E-304 T 22-04-2016 APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 SMART SM00465 17 98 2.2E-23 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 PANTHER PTHR30562 9 608 3.3E-304 T 22-04-2016 APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 Pfam PF02151 UvrB/uvrC motif 205 237 6.3E-9 T 22-04-2016 IPR001943 UVR domain GO:0005515 APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 Pfam PF14520 Helix-hairpin-helix domain 557 609 2.0E-8 T 22-04-2016 APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 Gene3D G3DSA:4.10.860.10 183 243 7.6E-21 T 22-04-2016 IPR001943 UVR domain GO:0005515 APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 589 8.8E-236 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 SMART SM00278 588 607 63.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 SMART SM00278 556 575 0.76 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 SUPERFAMILY SSF82771 17 100 3.01E-24 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 386 542 6.1E-45 T 22-04-2016 IPR001162 UvrC family homology region APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 30.087 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 SUPERFAMILY SSF46600 190 243 2.75E-13 T 22-04-2016 IPR001943 UVR domain GO:0005515 APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 3.4E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 Gene3D G3DSA:1.10.150.20 555 609 9.2E-22 T 22-04-2016 APT61_RS08210 7d4c180f65e6585a1bdf6985b3fbe0bd 610 Gene3D G3DSA:3.40.1440.10 17 97 2.1E-11 T 22-04-2016 IPR027299 GIY-YIG domain APT61_RS21430 dc06edb8b02de3077e00e6e5ec8440a3 274 SMART SM00047 127 256 1.8E-33 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APT61_RS21430 dc06edb8b02de3077e00e6e5ec8440a3 274 PANTHER PTHR40572 8 274 3.7E-87 T 22-04-2016 APT61_RS21430 dc06edb8b02de3077e00e6e5ec8440a3 274 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 141 267 3.5E-16 T 22-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 APT61_RS16325 58c386d956e64488e1541ef40fa49f0c 391 PANTHER PTHR13789:SF233 4 391 1.1E-232 T 22-04-2016 APT61_RS16325 58c386d956e64488e1541ef40fa49f0c 391 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 APT61_RS16325 58c386d956e64488e1541ef40fa49f0c 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 2.4E-17 T 22-04-2016 APT61_RS16325 58c386d956e64488e1541ef40fa49f0c 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 2.4E-17 T 22-04-2016 APT61_RS16325 58c386d956e64488e1541ef40fa49f0c 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 2.4E-17 T 22-04-2016 APT61_RS16325 58c386d956e64488e1541ef40fa49f0c 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 2.4E-17 T 22-04-2016 APT61_RS16325 58c386d956e64488e1541ef40fa49f0c 391 Pfam PF01494 FAD binding domain 6 339 3.3E-30 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 APT61_RS16325 58c386d956e64488e1541ef40fa49f0c 391 SUPERFAMILY SSF51905 6 178 1.94E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS16325 58c386d956e64488e1541ef40fa49f0c 391 SUPERFAMILY SSF51905 267 383 1.94E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS16325 58c386d956e64488e1541ef40fa49f0c 391 PANTHER PTHR13789 4 391 1.1E-232 T 22-04-2016 APT61_RS16325 58c386d956e64488e1541ef40fa49f0c 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 390 1.8E-130 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 APT61_RS16325 58c386d956e64488e1541ef40fa49f0c 391 Gene3D G3DSA:3.50.50.60 268 354 3.2E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS16325 58c386d956e64488e1541ef40fa49f0c 391 Gene3D G3DSA:3.50.50.60 6 183 3.2E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS17235 238d4b91910505fac675db5a10ddb549 189 PANTHER PTHR38013 1 189 1.9E-55 T 22-04-2016 APT61_RS17235 238d4b91910505fac675db5a10ddb549 189 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 45 149 1.1E-38 T 22-04-2016 APT61_RS15600 083e922da3e9b1dd0f8e345696f9e9d7 306 Pfam PF03734 L,D-transpeptidase catalytic domain 101 231 9.1E-17 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APT61_RS15600 083e922da3e9b1dd0f8e345696f9e9d7 306 PANTHER PTHR30582:SF8 35 306 9.2E-203 T 22-04-2016 APT61_RS15600 083e922da3e9b1dd0f8e345696f9e9d7 306 Gene3D G3DSA:2.40.440.10 93 234 1.9E-33 T 22-04-2016 APT61_RS15600 083e922da3e9b1dd0f8e345696f9e9d7 306 SUPERFAMILY SSF141523 177 233 3.27E-26 T 22-04-2016 APT61_RS15600 083e922da3e9b1dd0f8e345696f9e9d7 306 SUPERFAMILY SSF141523 99 149 3.27E-26 T 22-04-2016 APT61_RS15600 083e922da3e9b1dd0f8e345696f9e9d7 306 PANTHER PTHR30582 35 306 9.2E-203 T 22-04-2016 APT61_RS07550 a58b58edf6b72279d45008e84a860090 453 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 1.4E-19 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS07550 a58b58edf6b72279d45008e84a860090 453 Pfam PF01136 Peptidase family U32 75 343 5.0E-96 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS07550 a58b58edf6b72279d45008e84a860090 453 PANTHER PTHR30217:SF6 246 452 2.2E-241 T 22-04-2016 APT61_RS07550 a58b58edf6b72279d45008e84a860090 453 PANTHER PTHR30217:SF6 1 206 2.2E-241 T 22-04-2016 APT61_RS07550 a58b58edf6b72279d45008e84a860090 453 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS07550 a58b58edf6b72279d45008e84a860090 453 PANTHER PTHR30217 246 452 2.2E-241 T 22-04-2016 APT61_RS07550 a58b58edf6b72279d45008e84a860090 453 PANTHER PTHR30217 1 206 2.2E-241 T 22-04-2016 APT61_RS11165 d2996538a91a1f72a5d788bceef98a64 168 PANTHER PTHR33221:SF6 4 165 1.2E-43 T 22-04-2016 APT61_RS11165 d2996538a91a1f72a5d788bceef98a64 168 SUPERFAMILY SSF46785 5 146 4.25E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11165 d2996538a91a1f72a5d788bceef98a64 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 5 143 8.8E-27 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type APT61_RS11165 d2996538a91a1f72a5d788bceef98a64 168 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 51 69 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site APT61_RS11165 d2996538a91a1f72a5d788bceef98a64 168 Pfam PF02082 Transcriptional regulator 4 85 4.9E-22 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type APT61_RS11165 d2996538a91a1f72a5d788bceef98a64 168 PANTHER PTHR33221 4 165 1.2E-43 T 22-04-2016 APT61_RS11165 d2996538a91a1f72a5d788bceef98a64 168 Gene3D G3DSA:1.10.10.10 4 153 2.8E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS02510 bd59f17a4cff36cbe512e24eaf0c5299 130 Gene3D G3DSA:3.30.230.10 4 130 1.1E-50 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS02510 bd59f17a4cff36cbe512e24eaf0c5299 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.029 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid APT61_RS02510 bd59f17a4cff36cbe512e24eaf0c5299 130 SUPERFAMILY SSF54211 5 130 3.57E-49 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS02510 bd59f17a4cff36cbe512e24eaf0c5299 130 PANTHER PTHR21569 1 130 5.2E-75 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APT61_RS02510 bd59f17a4cff36cbe512e24eaf0c5299 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 APT61_RS02510 bd59f17a4cff36cbe512e24eaf0c5299 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 2.3E-47 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 APT61_RS14715 3edc39d248c481e2151a3082a964a235 93 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APT61_RS14715 3edc39d248c481e2151a3082a964a235 93 Gene3D G3DSA:3.30.70.100 3 93 2.0E-31 T 22-04-2016 APT61_RS14715 3edc39d248c481e2151a3082a964a235 93 SUPERFAMILY SSF54975 3 93 2.14E-30 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APT61_RS14715 3edc39d248c481e2151a3082a964a235 93 Pfam PF00708 Acylphosphatase 8 92 2.0E-25 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APT61_RS14715 3edc39d248c481e2151a3082a964a235 93 Hamap MF_01450 Acylphosphatase [yccX]. 2 92 30.55 T 22-04-2016 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APT61_RS14715 3edc39d248c481e2151a3082a964a235 93 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 22-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APT61_RS14715 3edc39d248c481e2151a3082a964a235 93 PANTHER PTHR10029 4 93 4.0E-36 T 22-04-2016 APT61_RS00985 e59fc3d1fa3119770c434e5fcc1d99d2 238 Gene3D G3DSA:3.40.50.1000 10 235 1.2E-31 T 22-04-2016 IPR023214 HAD-like domain APT61_RS00985 e59fc3d1fa3119770c434e5fcc1d99d2 238 PANTHER PTHR12725 1 238 1.2E-78 T 22-04-2016 APT61_RS00985 e59fc3d1fa3119770c434e5fcc1d99d2 238 SUPERFAMILY SSF56784 10 238 1.1E-41 T 22-04-2016 IPR023214 HAD-like domain APT61_RS00985 e59fc3d1fa3119770c434e5fcc1d99d2 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 82 201 6.5E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS00985 e59fc3d1fa3119770c434e5fcc1d99d2 238 PANTHER PTHR12725:SF65 1 238 1.2E-78 T 22-04-2016 APT61_RS00985 e59fc3d1fa3119770c434e5fcc1d99d2 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 207 2.4E-16 T 22-04-2016 IPR023214 HAD-like domain APT61_RS00985 e59fc3d1fa3119770c434e5fcc1d99d2 238 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 117 207 9.4E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS17565 96ea0589b5259f9285557c84c6f6ff83 269 PANTHER PTHR11645 4 268 1.2E-121 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APT61_RS17565 96ea0589b5259f9285557c84c6f6ff83 269 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 264 4.8E-38 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APT61_RS17565 96ea0589b5259f9285557c84c6f6ff83 269 PIRSF PIRSF000193 2 269 7.3E-97 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APT61_RS17565 96ea0589b5259f9285557c84c6f6ff83 269 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APT61_RS17565 96ea0589b5259f9285557c84c6f6ff83 269 SUPERFAMILY SSF51735 3 159 1.42E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS17565 96ea0589b5259f9285557c84c6f6ff83 269 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 265 7.4E-92 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APT61_RS17565 96ea0589b5259f9285557c84c6f6ff83 269 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 26.569 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APT61_RS17565 96ea0589b5259f9285557c84c6f6ff83 269 SUPERFAMILY SSF48179 162 268 3.23E-36 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS17565 96ea0589b5259f9285557c84c6f6ff83 269 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 7.5E-25 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal APT61_RS17565 96ea0589b5259f9285557c84c6f6ff83 269 Gene3D G3DSA:1.10.3730.10 162 264 4.8E-42 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 APT61_RS17565 96ea0589b5259f9285557c84c6f6ff83 269 Gene3D G3DSA:3.40.50.720 1 159 1.3E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10695 a59b66c0eb164ade906123415a6f40e8 448 PRINTS PR00207 Flagellin signature 76 99 2.0E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 APT61_RS10695 a59b66c0eb164ade906123415a6f40e8 448 PRINTS PR00207 Flagellin signature 2 19 2.0E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 APT61_RS10695 a59b66c0eb164ade906123415a6f40e8 448 PRINTS PR00207 Flagellin signature 41 60 2.0E-16 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 APT61_RS10695 a59b66c0eb164ade906123415a6f40e8 448 Pfam PF00669 Bacterial flagellin N-terminal helical region 1 104 4.2E-18 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APT61_RS10695 a59b66c0eb164ade906123415a6f40e8 448 PANTHER PTHR30244 273 447 3.0E-56 T 22-04-2016 APT61_RS10695 a59b66c0eb164ade906123415a6f40e8 448 PANTHER PTHR30244 1 139 3.0E-56 T 22-04-2016 APT61_RS10695 a59b66c0eb164ade906123415a6f40e8 448 Gene3D G3DSA:1.20.1330.10 349 403 1.2E-37 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APT61_RS10695 a59b66c0eb164ade906123415a6f40e8 448 Gene3D G3DSA:1.20.1330.10 20 105 1.2E-37 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APT61_RS10695 a59b66c0eb164ade906123415a6f40e8 448 Gene3D G3DSA:1.20.1330.10 288 289 1.2E-37 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APT61_RS10695 a59b66c0eb164ade906123415a6f40e8 448 PANTHER PTHR30244:SF1 273 447 3.0E-56 T 22-04-2016 APT61_RS10695 a59b66c0eb164ade906123415a6f40e8 448 PANTHER PTHR30244:SF1 1 139 3.0E-56 T 22-04-2016 APT61_RS10695 a59b66c0eb164ade906123415a6f40e8 448 Pfam PF00700 Bacterial flagellin C-terminal helical region 362 446 1.4E-17 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APT61_RS10695 a59b66c0eb164ade906123415a6f40e8 448 SUPERFAMILY SSF64518 1 251 1.12E-59 T 22-04-2016 APT61_RS10695 a59b66c0eb164ade906123415a6f40e8 448 SUPERFAMILY SSF64518 316 447 1.12E-59 T 22-04-2016 APT61_RS03335 027d1c597a85011d414d84f0b87694a2 169 Gene3D G3DSA:1.10.530.40 29 168 6.2E-58 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 APT61_RS03335 027d1c597a85011d414d84f0b87694a2 169 PANTHER PTHR38107:SF1 2 168 9.2E-116 T 22-04-2016 APT61_RS03335 027d1c597a85011d414d84f0b87694a2 169 PANTHER PTHR38107 2 168 9.2E-116 T 22-04-2016 APT61_RS03335 027d1c597a85011d414d84f0b87694a2 169 Pfam PF00959 Phage lysozyme 54 160 9.7E-23 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 APT61_RS03335 027d1c597a85011d414d84f0b87694a2 169 SUPERFAMILY SSF53955 10 168 6.14E-57 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS13935 53ea5439b7294c5495fd5eae7009853a 119 Pfam PF01230 HIT domain 12 109 2.3E-29 T 22-04-2016 IPR001310 Histidine triad (HIT) protein APT61_RS13935 53ea5439b7294c5495fd5eae7009853a 119 SUPERFAMILY SSF54197 2 113 1.86E-35 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 APT61_RS13935 53ea5439b7294c5495fd5eae7009853a 119 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 22-04-2016 IPR019808 Histidine triad, conserved site APT61_RS13935 53ea5439b7294c5495fd5eae7009853a 119 Gene3D G3DSA:3.30.428.10 3 110 2.9E-37 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 APT61_RS13935 53ea5439b7294c5495fd5eae7009853a 119 PANTHER PTHR23089:SF2 2 112 2.3E-51 T 22-04-2016 APT61_RS13935 53ea5439b7294c5495fd5eae7009853a 119 PRINTS PR00332 Histidine triad family signature 6 22 4.2E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein APT61_RS13935 53ea5439b7294c5495fd5eae7009853a 119 PRINTS PR00332 Histidine triad family signature 95 105 4.2E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein APT61_RS13935 53ea5439b7294c5495fd5eae7009853a 119 PRINTS PR00332 Histidine triad family signature 27 45 4.2E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein APT61_RS13935 53ea5439b7294c5495fd5eae7009853a 119 PANTHER PTHR23089 2 112 2.3E-51 T 22-04-2016 IPR001310 Histidine triad (HIT) protein APT61_RS04410 c9def2fab680b69f50f92e625e34d97c 230 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 9.1E-33 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 APT61_RS04410 c9def2fab680b69f50f92e625e34d97c 230 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 11 226 4.3E-110 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 APT61_RS04410 c9def2fab680b69f50f92e625e34d97c 230 SMART SM00927 59 157 2.0E-61 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 APT61_RS04410 c9def2fab680b69f50f92e625e34d97c 230 SUPERFAMILY SSF52980 7 227 2.52E-78 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APT61_RS04410 c9def2fab680b69f50f92e625e34d97c 230 Gene3D G3DSA:3.40.600.10 8 227 1.2E-76 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 APT61_RS04410 c9def2fab680b69f50f92e625e34d97c 230 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 230 154.246 T 22-04-2016 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 APT61_RS08085 c7eaecd36d6bb4d9a57ed8720d1ebc18 147 PIRSF PIRSF019404 1 147 5.1E-51 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APT61_RS08085 c7eaecd36d6bb4d9a57ed8720d1ebc18 147 Pfam PF02050 Flagellar FliJ protein 19 141 9.4E-33 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 APT61_RS08085 c7eaecd36d6bb4d9a57ed8720d1ebc18 147 PRINTS PR01004 Flagellar FliJ protein signature 63 84 3.3E-71 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APT61_RS08085 c7eaecd36d6bb4d9a57ed8720d1ebc18 147 PRINTS PR01004 Flagellar FliJ protein signature 108 126 3.3E-71 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APT61_RS08085 c7eaecd36d6bb4d9a57ed8720d1ebc18 147 PRINTS PR01004 Flagellar FliJ protein signature 27 43 3.3E-71 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APT61_RS08085 c7eaecd36d6bb4d9a57ed8720d1ebc18 147 PRINTS PR01004 Flagellar FliJ protein signature 126 146 3.3E-71 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APT61_RS08085 c7eaecd36d6bb4d9a57ed8720d1ebc18 147 PRINTS PR01004 Flagellar FliJ protein signature 44 61 3.3E-71 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APT61_RS08085 c7eaecd36d6bb4d9a57ed8720d1ebc18 147 PRINTS PR01004 Flagellar FliJ protein signature 86 107 3.3E-71 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APT61_RS08085 c7eaecd36d6bb4d9a57ed8720d1ebc18 147 PRINTS PR01004 Flagellar FliJ protein signature 4 26 3.3E-71 T 22-04-2016 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 APT61_RS08085 c7eaecd36d6bb4d9a57ed8720d1ebc18 147 PANTHER PTHR38786 1 147 6.2E-51 T 22-04-2016 APT61_RS08085 c7eaecd36d6bb4d9a57ed8720d1ebc18 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 144 3.1E-29 T 22-04-2016 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 APT61_RS20125 9a2edc66bac87632c181b27c8adf1983 232 PANTHER PTHR30041:SF1 23 216 9.8E-122 T 22-04-2016 APT61_RS20125 9a2edc66bac87632c181b27c8adf1983 232 Gene3D G3DSA:3.40.50.360 17 221 6.2E-98 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS20125 9a2edc66bac87632c181b27c8adf1983 232 SUPERFAMILY SSF52218 20 220 5.76E-63 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS20125 9a2edc66bac87632c181b27c8adf1983 232 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 8 218 1.9E-113 T 22-04-2016 IPR014063 Arsenate resistance ArsH APT61_RS20125 9a2edc66bac87632c181b27c8adf1983 232 Pfam PF03358 NADPH-dependent FMN reductase 26 171 3.7E-27 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APT61_RS20125 9a2edc66bac87632c181b27c8adf1983 232 PANTHER PTHR30041 23 216 9.8E-122 T 22-04-2016 APT61_RS15075 7685e403ced062aa096db5195bf558e7 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.442 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APT61_RS15075 7685e403ced062aa096db5195bf558e7 72 Gene3D G3DSA:2.40.50.140 1 71 6.9E-39 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS15075 7685e403ced062aa096db5195bf558e7 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 5.1E-39 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 APT61_RS15075 7685e403ced062aa096db5195bf558e7 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 8.4E-28 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 APT61_RS15075 7685e403ced062aa096db5195bf558e7 72 PANTHER PTHR33370 1 72 3.6E-50 T 22-04-2016 APT61_RS15075 7685e403ced062aa096db5195bf558e7 72 SUPERFAMILY SSF50249 1 70 5.36E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS15075 7685e403ced062aa096db5195bf558e7 72 SMART SM00316 4 72 2.8E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 APT61_RS01130 da56ff31888dcdfae140f751852ec1bc 443 Gene3D G3DSA:3.90.230.10 161 439 2.6E-54 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS01130 da56ff31888dcdfae140f751852ec1bc 443 PANTHER PTHR10804 1 440 1.7E-259 T 22-04-2016 APT61_RS01130 da56ff31888dcdfae140f751852ec1bc 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site APT61_RS01130 da56ff31888dcdfae140f751852ec1bc 443 SUPERFAMILY SSF55920 163 438 5.36E-56 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS01130 da56ff31888dcdfae140f751852ec1bc 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 58.246 T 22-04-2016 IPR022846 Xaa-Pro dipeptidase GO:0016795 APT61_RS01130 da56ff31888dcdfae140f751852ec1bc 443 PANTHER PTHR10804:SF101 1 440 1.7E-259 T 22-04-2016 APT61_RS01130 da56ff31888dcdfae140f751852ec1bc 443 Pfam PF00557 Metallopeptidase family M24 168 430 1.6E-44 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS01330 838c250aa24e1ca660a70633bce4663e 193 Gene3D G3DSA:3.90.470.20 35 101 9.6E-13 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS01330 838c250aa24e1ca660a70633bce4663e 193 Gene3D G3DSA:3.90.470.20 102 147 3.7E-15 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS01330 838c250aa24e1ca660a70633bce4663e 193 PANTHER PTHR12215 34 166 3.4E-31 T 22-04-2016 APT61_RS01330 838c250aa24e1ca660a70633bce4663e 193 SUPERFAMILY SSF56214 26 81 6.28E-9 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS01330 838c250aa24e1ca660a70633bce4663e 193 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 90 173 8.4E-11 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS01330 838c250aa24e1ca660a70633bce4663e 193 SUPERFAMILY SSF56214 89 182 8.37E-16 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PRINTS PR00097 Anthranilate synthase component II signature 4 18 4.2E-33 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PRINTS PR00097 Anthranilate synthase component II signature 124 136 4.2E-33 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PRINTS PR00097 Anthranilate synthase component II signature 52 61 4.2E-33 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PRINTS PR00097 Anthranilate synthase component II signature 79 90 4.2E-33 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PRINTS PR00097 Anthranilate synthase component II signature 104 112 4.2E-33 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PRINTS PR00097 Anthranilate synthase component II signature 166 179 4.2E-33 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 204 528 6.5E-127 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 187 2.7E-55 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PANTHER PTHR11922:SF25 1 59 6.7E-181 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PANTHER PTHR11922:SF25 266 524 6.7E-181 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 Gene3D G3DSA:3.40.50.880 3 190 3.6E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS09500 9b654421855595f59ac0116a216b0299 531 SUPERFAMILY SSF52317 3 191 2.38E-43 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS09500 9b654421855595f59ac0116a216b0299 531 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 202 530 38.307 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 Pfam PF00117 Glutamine amidotransferase class-I 6 186 1.9E-42 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 Pfam PF02885 Glycosyl transferase family, helical bundle domain 202 262 5.8E-15 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APT61_RS09500 9b654421855595f59ac0116a216b0299 531 Gene3D G3DSA:3.40.1030.10 273 528 7.8E-96 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 6.2E-13 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 6.2E-13 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 6.2E-13 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 3.5E-5 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 3.5E-5 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 SUPERFAMILY SSF52418 269 527 4.45E-89 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 Pfam PF00591 Glycosyl transferase family, a/b domain 273 521 7.1E-99 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 SUPERFAMILY SSF47648 201 266 6.67E-16 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PANTHER PTHR11922 1 59 6.7E-181 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 PANTHER PTHR11922 266 524 6.7E-181 T 22-04-2016 APT61_RS09500 9b654421855595f59ac0116a216b0299 531 Gene3D G3DSA:1.20.970.10 201 267 2.7E-27 T 22-04-2016 APT61_RS16985 8e35edf91f5695a49391cc91cb3044ed 240 Pfam PF00149 Calcineurin-like phosphoesterase 4 199 7.6E-9 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APT61_RS16985 8e35edf91f5695a49391cc91cb3044ed 240 PANTHER PTHR34990:SF1 2 240 7.1E-131 T 22-04-2016 APT61_RS16985 8e35edf91f5695a49391cc91cb3044ed 240 PANTHER PTHR34990 2 240 7.1E-131 T 22-04-2016 APT61_RS16985 8e35edf91f5695a49391cc91cb3044ed 240 SUPERFAMILY SSF56300 3 123 3.17E-29 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS16985 8e35edf91f5695a49391cc91cb3044ed 240 SUPERFAMILY SSF56300 151 223 3.17E-29 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS16985 8e35edf91f5695a49391cc91cb3044ed 240 Gene3D G3DSA:3.60.21.10 173 220 6.6E-21 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS16985 8e35edf91f5695a49391cc91cb3044ed 240 Gene3D G3DSA:3.60.21.10 3 125 6.6E-21 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS16985 8e35edf91f5695a49391cc91cb3044ed 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 131.548 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 APT61_RS16985 8e35edf91f5695a49391cc91cb3044ed 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 8.0E-110 T 22-04-2016 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54|UniPathway: UPA00359 APT61_RS11960 a1637a56b4704520fa14269e73ba0c6d 729 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 44 729 8.7E-138 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APT61_RS11960 a1637a56b4704520fa14269e73ba0c6d 729 Gene3D G3DSA:2.40.170.20 148 729 3.3E-71 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS11960 a1637a56b4704520fa14269e73ba0c6d 729 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 144 1.1E-18 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS11960 a1637a56b4704520fa14269e73ba0c6d 729 SUPERFAMILY SSF56935 30 433 1.25E-93 T 22-04-2016 APT61_RS11960 a1637a56b4704520fa14269e73ba0c6d 729 SUPERFAMILY SSF56935 464 727 1.25E-93 T 22-04-2016 APT61_RS11960 a1637a56b4704520fa14269e73ba0c6d 729 PANTHER PTHR32552 28 729 4.6E-299 T 22-04-2016 APT61_RS11960 a1637a56b4704520fa14269e73ba0c6d 729 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 712 729 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site APT61_RS11960 a1637a56b4704520fa14269e73ba0c6d 729 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 36 - T 22-04-2016 IPR010916 TonB box, conserved site APT61_RS11960 a1637a56b4704520fa14269e73ba0c6d 729 PANTHER PTHR32552:SF30 28 729 4.6E-299 T 22-04-2016 APT61_RS11960 a1637a56b4704520fa14269e73ba0c6d 729 Pfam PF00593 TonB dependent receptor 484 725 2.6E-18 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS11960 a1637a56b4704520fa14269e73ba0c6d 729 Gene3D G3DSA:2.170.130.10 20 147 2.2E-28 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS16225 bd673723fd3c8d050c3d0d30088e9fba 257 Gene3D G3DSA:3.40.50.1820 13 254 1.6E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS16225 bd673723fd3c8d050c3d0d30088e9fba 257 SUPERFAMILY SSF53474 13 253 6.89E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS16225 bd673723fd3c8d050c3d0d30088e9fba 257 Pfam PF12697 Alpha/beta hydrolase family 19 246 4.1E-22 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS16225 bd673723fd3c8d050c3d0d30088e9fba 257 PANTHER PTHR10992 15 254 4.4E-75 T 22-04-2016 APT61_RS16225 bd673723fd3c8d050c3d0d30088e9fba 257 PANTHER PTHR10992:SF768 15 254 4.4E-75 T 22-04-2016 APT61_RS10750 e3318f69a56f9d51b538d1a53787f56a 191 PANTHER PTHR10245:SF21 6 184 3.2E-38 T 22-04-2016 APT61_RS10750 e3318f69a56f9d51b538d1a53787f56a 191 Pfam PF01381 Helix-turn-helix 16 69 8.0E-14 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS10750 e3318f69a56f9d51b538d1a53787f56a 191 SUPERFAMILY SSF47413 5 73 2.04E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS10750 e3318f69a56f9d51b538d1a53787f56a 191 SMART SM00530 15 70 1.8E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS10750 e3318f69a56f9d51b538d1a53787f56a 191 Gene3D G3DSA:2.60.120.10 86 184 1.7E-12 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS10750 e3318f69a56f9d51b538d1a53787f56a 191 PANTHER PTHR10245 6 184 3.2E-38 T 22-04-2016 APT61_RS10750 e3318f69a56f9d51b538d1a53787f56a 191 SUPERFAMILY SSF51182 55 185 4.66E-16 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS10750 e3318f69a56f9d51b538d1a53787f56a 191 Gene3D G3DSA:1.10.260.40 3 75 4.4E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS07305 5e07f23b5459dd4893fb4b2d39f2bcb3 310 PIRSF PIRSF006621 1 310 8.4E-82 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APT61_RS07305 5e07f23b5459dd4893fb4b2d39f2bcb3 310 Gene3D G3DSA:3.20.20.70 2 241 2.5E-62 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS07305 5e07f23b5459dd4893fb4b2d39f2bcb3 310 PANTHER PTHR11082:SF26 1 308 1.7E-196 T 22-04-2016 APT61_RS07305 5e07f23b5459dd4893fb4b2d39f2bcb3 310 PANTHER PTHR11082 1 308 1.7E-196 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APT61_RS07305 5e07f23b5459dd4893fb4b2d39f2bcb3 310 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APT61_RS07305 5e07f23b5459dd4893fb4b2d39f2bcb3 310 SUPERFAMILY SSF51395 1 306 1.5E-69 T 22-04-2016 APT61_RS07305 5e07f23b5459dd4893fb4b2d39f2bcb3 310 Pfam PF01207 Dihydrouridine synthase (Dus) 5 298 2.9E-86 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APT61_RS07305 5e07f23b5459dd4893fb4b2d39f2bcb3 310 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.539 T 22-04-2016 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 APT61_RS02010 553147f5d87be544ff39b3f349d6b783 119 PANTHER PTHR38780:SF1 1 119 1.2E-56 T 22-04-2016 APT61_RS02010 553147f5d87be544ff39b3f349d6b783 119 Gene3D G3DSA:3.40.1260.10 1 119 2.4E-48 T 22-04-2016 IPR027396 DsrEFH-like APT61_RS02010 553147f5d87be544ff39b3f349d6b783 119 SUPERFAMILY SSF75169 1 119 2.62E-37 T 22-04-2016 IPR027396 DsrEFH-like APT61_RS02010 553147f5d87be544ff39b3f349d6b783 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 4 119 6.5E-47 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF APT61_RS02010 553147f5d87be544ff39b3f349d6b783 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 34.606 T 22-04-2016 IPR017462 Sulphur relay, TusC/DsrF APT61_RS02010 553147f5d87be544ff39b3f349d6b783 119 Pfam PF02635 DsrE/DsrF-like family 3 119 2.3E-25 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein APT61_RS02010 553147f5d87be544ff39b3f349d6b783 119 PANTHER PTHR38780 1 119 1.2E-56 T 22-04-2016 APT61_RS15020 045df51b9c3ac52581b8708353898f76 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0025 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS15020 045df51b9c3ac52581b8708353898f76 205 PANTHER PTHR11938:SF85 3 157 9.9E-81 T 22-04-2016 APT61_RS15020 045df51b9c3ac52581b8708353898f76 205 PANTHER PTHR11938 3 157 9.9E-81 T 22-04-2016 APT61_RS15020 045df51b9c3ac52581b8708353898f76 205 Gene3D G3DSA:3.30.70.20 4 74 4.1E-18 T 22-04-2016 APT61_RS15020 045df51b9c3ac52581b8708353898f76 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS15020 045df51b9c3ac52581b8708353898f76 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 1.5E-28 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS15020 045df51b9c3ac52581b8708353898f76 205 Gene3D G3DSA:3.30.70.20 75 118 4.1E-26 T 22-04-2016 APT61_RS15020 045df51b9c3ac52581b8708353898f76 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 3.8E-80 T 22-04-2016 IPR014297 Dimethylsulphoxide reductase, chain B APT61_RS15020 045df51b9c3ac52581b8708353898f76 205 Gene3D G3DSA:3.30.70.20 119 171 4.8E-18 T 22-04-2016 APT61_RS15020 045df51b9c3ac52581b8708353898f76 205 SUPERFAMILY SSF54862 3 198 7.64E-71 T 22-04-2016 APT61_RS11750 045df51b9c3ac52581b8708353898f76 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0025 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS11750 045df51b9c3ac52581b8708353898f76 205 PANTHER PTHR11938:SF85 3 157 9.9E-81 T 22-04-2016 APT61_RS11750 045df51b9c3ac52581b8708353898f76 205 PANTHER PTHR11938 3 157 9.9E-81 T 22-04-2016 APT61_RS11750 045df51b9c3ac52581b8708353898f76 205 Gene3D G3DSA:3.30.70.20 4 74 4.1E-18 T 22-04-2016 APT61_RS11750 045df51b9c3ac52581b8708353898f76 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS11750 045df51b9c3ac52581b8708353898f76 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 1.5E-28 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS11750 045df51b9c3ac52581b8708353898f76 205 Gene3D G3DSA:3.30.70.20 75 118 4.1E-26 T 22-04-2016 APT61_RS11750 045df51b9c3ac52581b8708353898f76 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 3.8E-80 T 22-04-2016 IPR014297 Dimethylsulphoxide reductase, chain B APT61_RS11750 045df51b9c3ac52581b8708353898f76 205 Gene3D G3DSA:3.30.70.20 119 171 4.8E-18 T 22-04-2016 APT61_RS11750 045df51b9c3ac52581b8708353898f76 205 SUPERFAMILY SSF54862 3 198 7.64E-71 T 22-04-2016 APT61_RS14465 d31a25e003138f21b01fc9d4ca1fbc58 174 Pfam PF16157 Domain of unknown function (DUF4865) 1 146 1.1E-44 T 22-04-2016 IPR032349 Protein of unknown function DUF4865 APT61_RS14465 d31a25e003138f21b01fc9d4ca1fbc58 174 Gene3D G3DSA:3.30.70.900 1 83 4.3E-4 T 22-04-2016 APT61_RS19915 a221e13b3a14f36f9d540aa76bccb279 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 1.8E-52 T 22-04-2016 IPR006056 RidA family APT61_RS19915 a221e13b3a14f36f9d540aa76bccb279 128 Gene3D G3DSA:3.30.1330.40 5 127 1.7E-45 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APT61_RS19915 a221e13b3a14f36f9d540aa76bccb279 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 22-04-2016 IPR019897 RidA, conserved site APT61_RS19915 a221e13b3a14f36f9d540aa76bccb279 128 PANTHER PTHR11803 1 127 3.5E-51 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APT61_RS19915 a221e13b3a14f36f9d540aa76bccb279 128 Pfam PF01042 Endoribonuclease L-PSP 7 126 1.3E-44 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APT61_RS19915 a221e13b3a14f36f9d540aa76bccb279 128 SUPERFAMILY SSF55298 4 127 5.34E-43 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APT61_RS11880 4ab07e877913c3c1c046444f0824be90 258 Gene3D G3DSA:3.60.15.10 1 258 5.5E-31 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS11880 4ab07e877913c3c1c046444f0824be90 258 Pfam PF12706 Beta-lactamase superfamily domain 19 221 3.8E-13 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS11880 4ab07e877913c3c1c046444f0824be90 258 PANTHER PTHR15032:SF13 1 258 8.1E-40 T 22-04-2016 APT61_RS11880 4ab07e877913c3c1c046444f0824be90 258 SUPERFAMILY SSF56281 2 258 9.8E-21 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS11880 4ab07e877913c3c1c046444f0824be90 258 PANTHER PTHR15032 1 258 8.1E-40 T 22-04-2016 APT61_RS05460 968f8e1441d4b3aff1020ecb4dcaa368 291 Pfam PF00480 ROK family 4 287 6.9E-79 T 22-04-2016 IPR000600 ROK family APT61_RS05460 968f8e1441d4b3aff1020ecb4dcaa368 291 SUPERFAMILY SSF53067 1 287 1.38E-54 T 22-04-2016 APT61_RS05460 968f8e1441d4b3aff1020ecb4dcaa368 291 PANTHER PTHR18964:SF140 1 287 3.4E-130 T 22-04-2016 APT61_RS05460 968f8e1441d4b3aff1020ecb4dcaa368 291 PANTHER PTHR18964 1 287 3.4E-130 T 22-04-2016 APT61_RS05460 968f8e1441d4b3aff1020ecb4dcaa368 291 ProSitePatterns PS01125 ROK family signature. 129 156 - T 22-04-2016 IPR000600 ROK family APT61_RS05460 968f8e1441d4b3aff1020ecb4dcaa368 291 Gene3D G3DSA:3.30.420.40 2 134 1.8E-31 T 22-04-2016 APT61_RS05460 968f8e1441d4b3aff1020ecb4dcaa368 291 Gene3D G3DSA:3.30.420.40 135 260 8.6E-43 T 22-04-2016 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 Gene3D G3DSA:3.40.50.620 6 144 9.8E-95 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 Gene3D G3DSA:3.40.50.620 183 380 9.8E-95 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 Gene3D G3DSA:2.20.28.20 145 176 1.5E-19 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 Pfam PF09334 tRNA synthetases class I (M) 8 397 3.7E-166 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 Pfam PF01588 Putative tRNA binding domain 581 674 2.6E-21 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 536 7.1E-208 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 Gene3D G3DSA:1.10.730.10 381 535 2.0E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 PANTHER PTHR11946 6 632 5.1E-258 T 22-04-2016 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 546 41.867 T 22-04-2016 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 SUPERFAMILY SSF52374 176 388 2.94E-107 T 22-04-2016 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 SUPERFAMILY SSF52374 6 141 2.94E-107 T 22-04-2016 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 SUPERFAMILY SSF57770 142 176 1.15E-12 T 22-04-2016 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 SUPERFAMILY SSF50249 570 676 1.84E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 SUPERFAMILY SSF47323 391 548 6.54E-46 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 1.3E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 1.3E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 1.3E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 1.3E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 1.3E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 1.3E-25 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 PANTHER PTHR11946:SF86 6 632 5.1E-258 T 22-04-2016 APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 Gene3D G3DSA:2.40.50.140 568 677 2.2E-38 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS07410 528334f6c9ed0ca5587d929f98192528 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 543 677 6.3E-48 T 22-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 Pfam PF03572 Peptidase family S41 356 529 1.5E-52 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 SMART SM00228 246 323 9.9E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 PANTHER PTHR32060:SF11 1 604 0.0 T 22-04-2016 APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 194 551 5.6E-128 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 320 8.5E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 535 667 9.9E-40 T 22-04-2016 IPR020992 Tail specific protease, C-terminal APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 Gene3D G3DSA:3.30.750.44 201 251 8.8E-4 T 22-04-2016 APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 Gene3D G3DSA:3.90.226.10 646 672 3.5E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 Gene3D G3DSA:3.90.226.10 336 533 3.5E-66 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 SUPERFAMILY SSF52096 178 264 1.19E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 SUPERFAMILY SSF52096 350 537 1.19E-68 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 SMART SM00245 326 531 1.0E-77 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 PANTHER PTHR32060 1 604 0.0 T 22-04-2016 APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 Gene3D G3DSA:2.30.42.10 252 335 4.6E-22 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS08730 35558c4cf1e71e85919259386e9fe945 682 SUPERFAMILY SSF50156 218 344 3.24E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS06120 476a3ca8dc35db1825cc1c533b2ab086 746 PANTHER PTHR33121 125 416 1.5E-224 T 22-04-2016 APT61_RS06120 476a3ca8dc35db1825cc1c533b2ab086 746 PANTHER PTHR33121 446 734 1.5E-224 T 22-04-2016 APT61_RS06120 476a3ca8dc35db1825cc1c533b2ab086 746 SUPERFAMILY SSF141868 498 737 1.31E-68 T 22-04-2016 IPR001633 EAL domain APT61_RS06120 476a3ca8dc35db1825cc1c533b2ab086 746 PANTHER PTHR33121:SF10 125 416 1.5E-224 T 22-04-2016 APT61_RS06120 476a3ca8dc35db1825cc1c533b2ab086 746 PANTHER PTHR33121:SF10 446 734 1.5E-224 T 22-04-2016 APT61_RS06120 476a3ca8dc35db1825cc1c533b2ab086 746 Pfam PF05231 MASE1 19 320 8.9E-35 T 22-04-2016 IPR007895 MASE1 APT61_RS06120 476a3ca8dc35db1825cc1c533b2ab086 746 SMART SM00052 492 735 1.2E-87 T 22-04-2016 IPR001633 EAL domain APT61_RS06120 476a3ca8dc35db1825cc1c533b2ab086 746 Pfam PF00563 EAL domain 498 730 6.3E-62 T 22-04-2016 IPR001633 EAL domain APT61_RS06120 476a3ca8dc35db1825cc1c533b2ab086 746 Gene3D G3DSA:3.20.20.450 496 736 5.1E-69 T 22-04-2016 IPR001633 EAL domain APT61_RS06120 476a3ca8dc35db1825cc1c533b2ab086 746 SMART SM00267 319 480 1.7E-7 T 22-04-2016 IPR000160 GGDEF domain APT61_RS09435 38a3452518a8937716b34f895e0a9b88 211 PIRSF PIRSF006324 5 211 4.8E-57 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS09435 38a3452518a8937716b34f895e0a9b88 211 PANTHER PTHR30086 5 208 1.6E-111 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS09435 38a3452518a8937716b34f895e0a9b88 211 Pfam PF01810 LysE type translocator 18 208 9.0E-49 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS09435 38a3452518a8937716b34f895e0a9b88 211 PANTHER PTHR30086:SF15 5 208 1.6E-111 T 22-04-2016 APT61_RS01060 58c4b956bde815f19b9d51cf0561f62d 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 1.3E-129 T 22-04-2016 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|UniPathway: UPA00574 APT61_RS01060 58c4b956bde815f19b9d51cf0561f62d 253 SUPERFAMILY SSF53167 6 250 3.8E-72 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APT61_RS01060 58c4b956bde815f19b9d51cf0561f62d 253 PANTHER PTHR21234:SF22 1 253 2.9E-195 T 22-04-2016 APT61_RS01060 58c4b956bde815f19b9d51cf0561f62d 253 Gene3D G3DSA:3.40.50.1580 5 252 1.8E-83 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APT61_RS01060 58c4b956bde815f19b9d51cf0561f62d 253 PANTHER PTHR21234 1 253 2.9E-195 T 22-04-2016 IPR018017 Nucleoside phosphorylase APT61_RS01060 58c4b956bde815f19b9d51cf0561f62d 253 Pfam PF01048 Phosphorylase superfamily 21 245 7.3E-40 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APT61_RS01060 58c4b956bde815f19b9d51cf0561f62d 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APT61_RS13175 5435ada37d3b0f44e145446ee40f124b 344 PANTHER PTHR30420 1 344 1.4E-209 T 22-04-2016 APT61_RS13175 5435ada37d3b0f44e145446ee40f124b 344 PANTHER PTHR30420:SF1 1 344 1.4E-209 T 22-04-2016 APT61_RS13175 5435ada37d3b0f44e145446ee40f124b 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 2.5E-151 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 APT61_RS13175 5435ada37d3b0f44e145446ee40f124b 344 SUPERFAMILY SSF55729 1 337 1.59E-134 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS13175 5435ada37d3b0f44e145446ee40f124b 344 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 344 67.25 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 APT61_RS13175 5435ada37d3b0f44e145446ee40f124b 344 Gene3D G3DSA:3.40.630.30 1 150 5.2E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS13175 5435ada37d3b0f44e145446ee40f124b 344 Gene3D G3DSA:3.40.630.30 218 246 5.2E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS13175 5435ada37d3b0f44e145446ee40f124b 344 Gene3D G3DSA:2.40.40.20 274 337 2.3E-12 T 22-04-2016 APT61_RS13175 5435ada37d3b0f44e145446ee40f124b 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 1.2E-161 T 22-04-2016 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 APT61_RS13175 5435ada37d3b0f44e145446ee40f124b 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 9.6E-147 T 22-04-2016 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109|UniPathway: UPA00185 APT61_RS20900 4e9a6df385fb74bec808decd769e6b7d 470 SUPERFAMILY SSF52540 203 274 4.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20900 4e9a6df385fb74bec808decd769e6b7d 470 SUPERFAMILY SSF52540 301 455 4.7E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20900 4e9a6df385fb74bec808decd769e6b7d 470 Gene3D G3DSA:1.10.860.10 26 128 9.1E-42 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal APT61_RS20900 4e9a6df385fb74bec808decd769e6b7d 470 Gene3D G3DSA:3.40.50.300 190 463 8.1E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20900 4e9a6df385fb74bec808decd769e6b7d 470 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 26 463 1.4E-175 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 APT61_RS20900 4e9a6df385fb74bec808decd769e6b7d 470 SUPERFAMILY SSF48024 24 135 3.4E-39 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APT61_RS20900 4e9a6df385fb74bec808decd769e6b7d 470 Pfam PF00772 DnaB-like helicase N terminal domain 26 127 4.2E-37 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 APT61_RS20900 4e9a6df385fb74bec808decd769e6b7d 470 SMART SM00382 222 428 3.6E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS20900 4e9a6df385fb74bec808decd769e6b7d 470 PANTHER PTHR30153 10 470 3.8E-226 T 22-04-2016 APT61_RS20900 4e9a6df385fb74bec808decd769e6b7d 470 Pfam PF03796 DnaB-like helicase C terminal domain 205 461 5.2E-113 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 APT61_RS17190 1f4e3a5ce8fa0e3417d663be6101fe99 117 SUPERFAMILY SSF54909 1 116 6.44E-54 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS17190 1f4e3a5ce8fa0e3417d663be6101fe99 117 PIRSF PIRSF007028 1 117 1.0E-55 T 22-04-2016 IPR009874 Protein of unknown function DUF1428 APT61_RS17190 1f4e3a5ce8fa0e3417d663be6101fe99 117 Gene3D G3DSA:3.30.70.900 1 116 1.5E-56 T 22-04-2016 APT61_RS17190 1f4e3a5ce8fa0e3417d663be6101fe99 117 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 4.6E-47 T 22-04-2016 IPR009874 Protein of unknown function DUF1428 APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 Pfam PF00672 HAMP domain 197 253 1.7E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 Pfam PF08447 PAS fold 31 113 1.2E-11 T 22-04-2016 IPR013655 PAS fold-3 GO:0005515 APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 SUPERFAMILY SSF58104 236 509 7.59E-59 T 22-04-2016 APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 SMART SM00283 263 510 4.8E-63 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 PANTHER PTHR32089 43 509 5.2E-91 T 22-04-2016 APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 Gene3D G3DSA:3.30.450.20 21 114 1.1E-21 T 22-04-2016 APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 SUPERFAMILY SSF55785 21 114 8.72E-23 T 22-04-2016 IPR000014 PAS domain APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 2.0E-37 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 2.0E-37 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 2.0E-37 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 2.0E-37 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 509 3.2E-47 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 SMART SM00086 80 120 2.9E-5 T 22-04-2016 IPR001610 PAC motif APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 Gene3D G3DSA:1.10.287.950 279 481 1.2E-47 T 22-04-2016 APT61_RS10815 8c3774a322062d9cbe8e6e1cda4467ab 511 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 123 9.1E-14 T 22-04-2016 IPR000014 PAS domain APT61_RS14385 6f07c7a1f7b264d5ddba686820ecfa60 363 Gene3D G3DSA:3.20.20.30 1 355 1.1E-86 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS14385 6f07c7a1f7b264d5ddba686820ecfa60 363 PANTHER PTHR30011 1 352 1.1E-156 T 22-04-2016 APT61_RS14385 6f07c7a1f7b264d5ddba686820ecfa60 363 Hamap MF_01699 Pyrimidine monooxygenase RutA [rutA]. 1 360 70.543 T 22-04-2016 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 APT61_RS14385 6f07c7a1f7b264d5ddba686820ecfa60 363 TIGRFAM TIGR03612 RutA: pyrimidine utilization protein A 1 354 5.8E-219 T 22-04-2016 IPR019914 Pyrimidine monooxygenase RutA GO:0004497|GO:0006212|GO:0055114 KEGG: 00240+1.14.99.46 APT61_RS14385 6f07c7a1f7b264d5ddba686820ecfa60 363 PANTHER PTHR30011:SF1 1 352 1.1E-156 T 22-04-2016 APT61_RS14385 6f07c7a1f7b264d5ddba686820ecfa60 363 Pfam PF00296 Luciferase-like monooxygenase 1 320 2.9E-70 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS14385 6f07c7a1f7b264d5ddba686820ecfa60 363 SUPERFAMILY SSF51679 1 351 5.0E-78 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS11910 da1240c94dfe434f8ca6fdaa146c0131 471 Pfam PF04575 Protein of unknown function (DUF560) 186 471 8.7E-71 T 22-04-2016 IPR007655 Protein of unknown function DUF560 APT61_RS11910 da1240c94dfe434f8ca6fdaa146c0131 471 SUPERFAMILY SSF48452 91 162 7.36E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS11910 da1240c94dfe434f8ca6fdaa146c0131 471 Gene3D G3DSA:1.25.40.10 60 162 1.4E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS11910 da1240c94dfe434f8ca6fdaa146c0131 471 Pfam PF14559 Tetratricopeptide repeat 108 172 1.7E-10 T 22-04-2016 APT61_RS05105 925a8e4b0dacc8c8cc98dc41a7b7b11c 136 Hamap MF_00128 Protein NrdI [nrdI]. 3 132 36.766 T 22-04-2016 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial APT61_RS05105 925a8e4b0dacc8c8cc98dc41a7b7b11c 136 PANTHER PTHR37297:SF1 2 133 1.5E-51 T 22-04-2016 APT61_RS05105 925a8e4b0dacc8c8cc98dc41a7b7b11c 136 SUPERFAMILY SSF52218 1 131 3.16E-23 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS05105 925a8e4b0dacc8c8cc98dc41a7b7b11c 136 Gene3D G3DSA:3.40.50.360 4 132 7.0E-57 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS05105 925a8e4b0dacc8c8cc98dc41a7b7b11c 136 TIGRFAM TIGR00333 nrdI: nrdI protein 5 131 1.8E-58 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI APT61_RS05105 925a8e4b0dacc8c8cc98dc41a7b7b11c 136 PANTHER PTHR37297 2 133 1.5E-51 T 22-04-2016 APT61_RS05105 925a8e4b0dacc8c8cc98dc41a7b7b11c 136 PIRSF PIRSF005087 1 136 2.5E-54 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI APT61_RS05105 925a8e4b0dacc8c8cc98dc41a7b7b11c 136 Pfam PF07972 NrdI Flavodoxin like 5 122 1.1E-46 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI APT61_RS01570 e2bd5efda2cab9a0841e0bbe79a2d600 246 PANTHER PTHR23344 3 240 3.5E-77 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 APT61_RS01570 e2bd5efda2cab9a0841e0bbe79a2d600 246 PANTHER PTHR23344:SF20 3 240 3.5E-77 T 22-04-2016 APT61_RS01570 e2bd5efda2cab9a0841e0bbe79a2d600 246 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 12 238 6.6E-38 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 APT61_RS01570 e2bd5efda2cab9a0841e0bbe79a2d600 246 SUPERFAMILY SSF51695 5 239 3.14E-62 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APT61_RS01570 e2bd5efda2cab9a0841e0bbe79a2d600 246 Gene3D G3DSA:3.20.20.190 3 239 6.2E-62 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APT61_RS09220 a49794748e67ab22f96bbc56a1f59961 76 SUPERFAMILY SSF140376 2 74 1.16E-28 T 22-04-2016 APT61_RS09220 a49794748e67ab22f96bbc56a1f59961 76 Pfam PF06150 ChaB 9 75 4.5E-28 T 22-04-2016 IPR009317 ChaB APT61_RS01520 7b3ff209cb825fe91e974f2062984c56 127 Gene3D G3DSA:3.40.630.30 24 89 1.9E-7 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS01520 7b3ff209cb825fe91e974f2062984c56 127 Pfam PF12568 Acetyltransferase (GNAT) domain 2 124 2.1E-49 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS01520 7b3ff209cb825fe91e974f2062984c56 127 Hamap MF_02018 PanD maturation factor [panM]. 1 126 32.929 T 22-04-2016 IPR032900 PanD maturation factor PanM GO:0015940|GO:0031638 APT61_RS01520 7b3ff209cb825fe91e974f2062984c56 127 SUPERFAMILY SSF55729 6 121 3.24E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS22060 d9da2c75941bbe8f0dbbca23d02adafc 362 SUPERFAMILY SSF51604 117 361 2.88E-63 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS22060 d9da2c75941bbe8f0dbbca23d02adafc 362 PANTHER PTHR13794 2 361 2.5E-87 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APT61_RS22060 d9da2c75941bbe8f0dbbca23d02adafc 362 Pfam PF13378 Enolase C-terminal domain-like 152 355 3.5E-53 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS22060 d9da2c75941bbe8f0dbbca23d02adafc 362 PANTHER PTHR13794:SF58 2 361 2.5E-87 T 22-04-2016 APT61_RS22060 d9da2c75941bbe8f0dbbca23d02adafc 362 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 32 129 2.3E-17 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APT61_RS22060 d9da2c75941bbe8f0dbbca23d02adafc 362 Gene3D G3DSA:3.20.20.120 125 361 1.6E-65 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS22060 d9da2c75941bbe8f0dbbca23d02adafc 362 Gene3D G3DSA:3.30.390.10 5 124 3.6E-36 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS22060 d9da2c75941bbe8f0dbbca23d02adafc 362 SMART SM00922 148 245 1.2E-25 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APT61_RS22060 d9da2c75941bbe8f0dbbca23d02adafc 362 SUPERFAMILY SSF54826 5 130 4.18E-31 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS07495 2e8ffeb943f55d4ebdc42fdac73434ed 455 Gene3D G3DSA:1.10.1040.10 263 450 1.1E-49 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS07495 2e8ffeb943f55d4ebdc42fdac73434ed 455 PANTHER PTHR30562:SF4 4 454 7.9E-157 T 22-04-2016 APT61_RS07495 2e8ffeb943f55d4ebdc42fdac73434ed 455 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 6 166 3.5E-40 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APT61_RS07495 2e8ffeb943f55d4ebdc42fdac73434ed 455 PANTHER PTHR30562 4 454 7.9E-157 T 22-04-2016 APT61_RS07495 2e8ffeb943f55d4ebdc42fdac73434ed 455 PRINTS PR00084 Mannitol dehydrogenase signature 157 170 1.9E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS07495 2e8ffeb943f55d4ebdc42fdac73434ed 455 PRINTS PR00084 Mannitol dehydrogenase signature 7 17 1.9E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS07495 2e8ffeb943f55d4ebdc42fdac73434ed 455 PRINTS PR00084 Mannitol dehydrogenase signature 197 210 1.9E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS07495 2e8ffeb943f55d4ebdc42fdac73434ed 455 PRINTS PR00084 Mannitol dehydrogenase signature 227 242 1.9E-16 T 22-04-2016 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 APT61_RS07495 2e8ffeb943f55d4ebdc42fdac73434ed 455 Gene3D G3DSA:3.40.50.720 5 260 4.8E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07495 2e8ffeb943f55d4ebdc42fdac73434ed 455 SUPERFAMILY SSF51735 6 260 5.12E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07495 2e8ffeb943f55d4ebdc42fdac73434ed 455 SUPERFAMILY SSF48179 263 450 1.12E-43 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS07495 2e8ffeb943f55d4ebdc42fdac73434ed 455 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 196 438 5.0E-83 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 PANTHER PTHR10836 1 331 3.9E-215 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 Gene3D G3DSA:3.30.360.10 159 315 1.4E-66 T 22-04-2016 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 PANTHER PTHR10836:SF57 1 331 3.9E-215 T 22-04-2016 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 Gene3D G3DSA:3.40.50.720 2 158 3.4E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 325 2.0E-135 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 2.9E-53 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 SUPERFAMILY SSF51735 3 166 1.72E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 313 1.5E-61 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 PIRSF PIRSF000149 1 333 9.0E-120 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 SMART SM00846 2 150 1.3E-80 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.5E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.5E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.5E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 266 281 1.5E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.5E-32 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS10210 9ebe25c59551bb11984c2a5e8679aa43 333 SUPERFAMILY SSF55347 149 313 4.56E-63 T 22-04-2016 APT61_RS16655 020cfc023e692c9e1c3a9947a8fe4fff 266 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS16655 020cfc023e692c9e1c3a9947a8fe4fff 266 Gene3D G3DSA:3.40.50.300 6 234 1.2E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16655 020cfc023e692c9e1c3a9947a8fe4fff 266 SMART SM00382 32 229 5.3E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS16655 020cfc023e692c9e1c3a9947a8fe4fff 266 PANTHER PTHR24220:SF438 9 265 1.0E-158 T 22-04-2016 APT61_RS16655 020cfc023e692c9e1c3a9947a8fe4fff 266 Pfam PF00005 ABC transporter 24 171 1.5E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS16655 020cfc023e692c9e1c3a9947a8fe4fff 266 PANTHER PTHR24220 9 265 1.0E-158 T 22-04-2016 APT61_RS16655 020cfc023e692c9e1c3a9947a8fe4fff 266 SUPERFAMILY SSF52540 8 233 1.74E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18030 0e42c3eb08e387c30beae96eb12c6252 155 PANTHER PTHR10642 1 151 1.2E-65 T 22-04-2016 APT61_RS18030 0e42c3eb08e387c30beae96eb12c6252 155 SUPERFAMILY SSF53098 3 141 5.56E-59 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS18030 0e42c3eb08e387c30beae96eb12c6252 155 Gene3D G3DSA:3.30.420.10 2 148 1.3E-62 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS18030 0e42c3eb08e387c30beae96eb12c6252 155 Pfam PF00075 RNase H 3 141 5.5E-56 T 22-04-2016 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 APT61_RS18030 0e42c3eb08e387c30beae96eb12c6252 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 39.168 T 22-04-2016 IPR022892 Ribonuclease H GO:0004523 APT61_RS20620 50430dac2e1a123799d5b745ef589133 331 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 318 36.841 T 22-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 APT61_RS20620 50430dac2e1a123799d5b745ef589133 331 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 312 4.0E-92 T 22-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 APT61_RS20620 50430dac2e1a123799d5b745ef589133 331 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 312 2.2E-162 T 22-04-2016 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 APT61_RS20620 50430dac2e1a123799d5b745ef589133 331 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 8.7E-117 T 22-04-2016 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 APT61_RS15850 59a10c2d53285f1f447222bad8767b54 385 PANTHER PTHR13693 4 381 2.4E-165 T 22-04-2016 APT61_RS15850 59a10c2d53285f1f447222bad8767b54 385 Pfam PF00155 Aminotransferase class I and II 42 380 4.4E-64 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS15850 59a10c2d53285f1f447222bad8767b54 385 Gene3D G3DSA:3.90.1150.10 270 382 4.1E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS15850 59a10c2d53285f1f447222bad8767b54 385 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 384 48.319 T 22-04-2016 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 APT61_RS15850 59a10c2d53285f1f447222bad8767b54 385 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 22-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 APT61_RS15850 59a10c2d53285f1f447222bad8767b54 385 PANTHER PTHR13693:SF53 4 381 2.4E-165 T 22-04-2016 APT61_RS15850 59a10c2d53285f1f447222bad8767b54 385 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 381 6.0E-140 T 22-04-2016 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147|UniPathway: UPA00078 APT61_RS15850 59a10c2d53285f1f447222bad8767b54 385 Gene3D G3DSA:3.40.640.10 57 269 3.3E-81 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS15850 59a10c2d53285f1f447222bad8767b54 385 SUPERFAMILY SSF53383 3 380 3.13E-105 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS12615 86bea8496c091e989132cdb896f19b06 155 PANTHER PTHR35603:SF1 1 155 1.2E-53 T 22-04-2016 APT61_RS12615 86bea8496c091e989132cdb896f19b06 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 2.0E-7 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 APT61_RS12615 86bea8496c091e989132cdb896f19b06 155 PANTHER PTHR35603 1 155 1.2E-53 T 22-04-2016 APT61_RS21385 542cb76b7053163d5367761bfa5a1147 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 291 1.7E-149 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21385 542cb76b7053163d5367761bfa5a1147 303 PANTHER PTHR30075 1 300 3.0E-277 T 22-04-2016 APT61_RS21385 542cb76b7053163d5367761bfa5a1147 303 SUPERFAMILY SSF55681 8 292 1.06E-133 T 22-04-2016 APT61_RS21385 542cb76b7053163d5367761bfa5a1147 303 Gene3D G3DSA:1.20.58.180 215 298 9.5E-37 T 22-04-2016 APT61_RS21385 542cb76b7053163d5367761bfa5a1147 303 Gene3D G3DSA:3.30.930.10 4 213 1.3E-105 T 22-04-2016 APT61_RS21385 542cb76b7053163d5367761bfa5a1147 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.594 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21385 542cb76b7053163d5367761bfa5a1147 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.6E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21385 542cb76b7053163d5367761bfa5a1147 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.6E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21385 542cb76b7053163d5367761bfa5a1147 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.6E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21385 542cb76b7053163d5367761bfa5a1147 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.6E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21385 542cb76b7053163d5367761bfa5a1147 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.6E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21385 542cb76b7053163d5367761bfa5a1147 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.6E-71 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21385 542cb76b7053163d5367761bfa5a1147 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 300 6.6E-177 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS18715 7fa2e5cec0ee527860917b786729a7b2 298 Pfam PF12833 Helix-turn-helix domain 221 298 1.1E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS18715 7fa2e5cec0ee527860917b786729a7b2 298 Gene3D G3DSA:2.60.120.280 33 179 4.7E-4 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS18715 7fa2e5cec0ee527860917b786729a7b2 298 Gene3D G3DSA:1.10.10.60 252 298 1.4E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS18715 7fa2e5cec0ee527860917b786729a7b2 298 SMART SM00342 215 298 2.0E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS18715 7fa2e5cec0ee527860917b786729a7b2 298 Pfam PF12852 Cupin 2 182 9.5E-32 T 22-04-2016 IPR032783 AraC-type transcription regulator, ligand-binding domain APT61_RS18715 7fa2e5cec0ee527860917b786729a7b2 298 SUPERFAMILY SSF51215 133 179 6.93E-5 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS18715 7fa2e5cec0ee527860917b786729a7b2 298 SUPERFAMILY SSF51215 27 93 6.93E-5 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS18715 7fa2e5cec0ee527860917b786729a7b2 298 SUPERFAMILY SSF46689 251 298 2.51E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS18715 7fa2e5cec0ee527860917b786729a7b2 298 SUPERFAMILY SSF46689 198 249 6.14E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS18715 7fa2e5cec0ee527860917b786729a7b2 298 Gene3D G3DSA:1.10.10.60 197 251 2.6E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS18715 7fa2e5cec0ee527860917b786729a7b2 298 PANTHER PTHR11019 26 298 2.7E-55 T 22-04-2016 APT61_RS18715 7fa2e5cec0ee527860917b786729a7b2 298 PANTHER PTHR11019:SF77 26 298 2.7E-55 T 22-04-2016 APT61_RS21180 40bef12004cd5ba20f9caea2774219ab 101 PANTHER PTHR34581 2 101 1.6E-43 T 22-04-2016 APT61_RS21180 40bef12004cd5ba20f9caea2774219ab 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 3.2E-26 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS21180 40bef12004cd5ba20f9caea2774219ab 101 PANTHER PTHR34581:SF2 2 101 1.6E-43 T 22-04-2016 APT61_RS21180 40bef12004cd5ba20f9caea2774219ab 101 Gene3D G3DSA:3.40.50.270 1 100 6.1E-40 T 22-04-2016 APT61_RS21180 40bef12004cd5ba20f9caea2774219ab 101 SUPERFAMILY SSF52794 1 100 3.66E-36 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS03965 6007dd8a7e06c79f41ebd2624ceae069 98 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 97 19.873 T 22-04-2016 IPR003746 Protein of unknown function DUF167 APT61_RS03965 6007dd8a7e06c79f41ebd2624ceae069 98 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 6 91 5.4E-30 T 22-04-2016 IPR005228 Conserved hypothetical protein CHP00251 APT61_RS03965 6007dd8a7e06c79f41ebd2624ceae069 98 PANTHER PTHR13420 10 98 7.1E-29 T 22-04-2016 APT61_RS03965 6007dd8a7e06c79f41ebd2624ceae069 98 SMART SM01152 7 83 2.0E-36 T 22-04-2016 IPR003746 Protein of unknown function DUF167 APT61_RS03965 6007dd8a7e06c79f41ebd2624ceae069 98 Gene3D G3DSA:3.30.1200.10 3 93 7.1E-31 T 22-04-2016 IPR003746 Protein of unknown function DUF167 APT61_RS03965 6007dd8a7e06c79f41ebd2624ceae069 98 SUPERFAMILY SSF69786 4 96 5.89E-32 T 22-04-2016 IPR003746 Protein of unknown function DUF167 APT61_RS03965 6007dd8a7e06c79f41ebd2624ceae069 98 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 4.3E-25 T 22-04-2016 IPR003746 Protein of unknown function DUF167 APT61_RS03085 d52709be69f9b9e60d7b2bc8d2baf70c 332 SUPERFAMILY SSF55347 127 291 3.43E-22 T 22-04-2016 APT61_RS03085 d52709be69f9b9e60d7b2bc8d2baf70c 332 SUPERFAMILY SSF51735 2 152 5.2E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS03085 d52709be69f9b9e60d7b2bc8d2baf70c 332 PANTHER PTHR22604:SF76 1 316 1.3E-152 T 22-04-2016 APT61_RS03085 d52709be69f9b9e60d7b2bc8d2baf70c 332 PANTHER PTHR22604 1 316 1.3E-152 T 22-04-2016 APT61_RS03085 d52709be69f9b9e60d7b2bc8d2baf70c 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 5.6E-27 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APT61_RS03085 d52709be69f9b9e60d7b2bc8d2baf70c 332 Gene3D G3DSA:3.30.360.10 143 324 3.0E-65 T 22-04-2016 APT61_RS03085 d52709be69f9b9e60d7b2bc8d2baf70c 332 Gene3D G3DSA:3.40.50.720 1 142 2.0E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS17830 9f68145b444b84b388e680bd08f3a7ee 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 3.6E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS17830 9f68145b444b84b388e680bd08f3a7ee 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 3.6E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS17830 9f68145b444b84b388e680bd08f3a7ee 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 3.6E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS17830 9f68145b444b84b388e680bd08f3a7ee 162 SUPERFAMILY SSF46785 19 150 1.71E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17830 9f68145b444b84b388e680bd08f3a7ee 162 PANTHER PTHR33164 41 161 3.5E-20 T 22-04-2016 APT61_RS17830 9f68145b444b84b388e680bd08f3a7ee 162 Gene3D G3DSA:1.10.10.10 18 147 6.1E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17830 9f68145b444b84b388e680bd08f3a7ee 162 Pfam PF01047 MarR family 44 101 1.4E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS17830 9f68145b444b84b388e680bd08f3a7ee 162 SMART SM00347 37 137 1.4E-16 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS11945 769ab670f9e5e178dc62825f0002092c 303 Gene3D G3DSA:3.40.190.10 179 256 9.4E-5 T 22-04-2016 APT61_RS11945 769ab670f9e5e178dc62825f0002092c 303 Gene3D G3DSA:1.10.10.10 7 91 1.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11945 769ab670f9e5e178dc62825f0002092c 303 SUPERFAMILY SSF46785 6 87 2.82E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11945 769ab670f9e5e178dc62825f0002092c 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.5E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS11945 769ab670f9e5e178dc62825f0002092c 303 PANTHER PTHR30126:SF29 6 274 7.8E-38 T 22-04-2016 APT61_RS11945 769ab670f9e5e178dc62825f0002092c 303 PANTHER PTHR30126 6 274 7.8E-38 T 22-04-2016 APT61_RS11945 769ab670f9e5e178dc62825f0002092c 303 Pfam PF03466 LysR substrate binding domain 103 287 5.2E-12 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS11945 769ab670f9e5e178dc62825f0002092c 303 SUPERFAMILY SSF53850 95 294 5.61E-14 T 22-04-2016 APT61_RS19205 b4cf035890ef8f5bfd340447d23c172c 342 SUPERFAMILY SSF53335 154 315 1.49E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS19205 b4cf035890ef8f5bfd340447d23c172c 342 PANTHER PTHR18895:SF70 53 342 1.3E-166 T 22-04-2016 APT61_RS19205 b4cf035890ef8f5bfd340447d23c172c 342 Pfam PF05175 Methyltransferase small domain 167 333 2.9E-60 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 APT61_RS19205 b4cf035890ef8f5bfd340447d23c172c 342 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 1.2E-57 T 22-04-2016 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS19205 b4cf035890ef8f5bfd340447d23c172c 342 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APT61_RS19205 b4cf035890ef8f5bfd340447d23c172c 342 Gene3D G3DSA:3.40.50.150 159 318 3.7E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS19205 b4cf035890ef8f5bfd340447d23c172c 342 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.333 T 22-04-2016 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS19205 b4cf035890ef8f5bfd340447d23c172c 342 PANTHER PTHR18895 53 342 1.3E-166 T 22-04-2016 APT61_RS00445 5c523416961908f028548e2c12713302 282 SUPERFAMILY SSF46689 228 278 1.57E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS00445 5c523416961908f028548e2c12713302 282 Pfam PF02311 AraC-like ligand binding domain 22 133 3.1E-17 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS00445 5c523416961908f028548e2c12713302 282 Pfam PF12833 Helix-turn-helix domain 199 277 1.2E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS00445 5c523416961908f028548e2c12713302 282 Gene3D G3DSA:2.60.120.280 27 161 1.1E-13 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS00445 5c523416961908f028548e2c12713302 282 Gene3D G3DSA:1.10.10.60 229 279 4.5E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS00445 5c523416961908f028548e2c12713302 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 3.2E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS00445 5c523416961908f028548e2c12713302 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 3.2E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS00445 5c523416961908f028548e2c12713302 282 PANTHER PTHR11019 20 282 4.1E-149 T 22-04-2016 APT61_RS00445 5c523416961908f028548e2c12713302 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 271 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS00445 5c523416961908f028548e2c12713302 282 SMART SM00342 192 275 2.0E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS00445 5c523416961908f028548e2c12713302 282 SUPERFAMILY SSF51182 10 92 1.02E-11 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS00445 5c523416961908f028548e2c12713302 282 Gene3D G3DSA:1.10.10.60 175 228 1.2E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS00445 5c523416961908f028548e2c12713302 282 PANTHER PTHR11019:SF107 20 282 4.1E-149 T 22-04-2016 APT61_RS00445 5c523416961908f028548e2c12713302 282 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 1 282 48.864 T 22-04-2016 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 APT61_RS01915 d5fb67fd388f7d662731f23f0713723f 340 Pfam PF00561 alpha/beta hydrolase fold 74 313 1.8E-23 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS01915 d5fb67fd388f7d662731f23f0713723f 340 PANTHER PTHR10794:SF46 14 340 1.6E-88 T 22-04-2016 APT61_RS01915 d5fb67fd388f7d662731f23f0713723f 340 PIRSF PIRSF005211 10 340 2.3E-105 T 22-04-2016 IPR012020 AB hydrolase 4 family KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- APT61_RS01915 d5fb67fd388f7d662731f23f0713723f 340 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 240 281 - T 22-04-2016 IPR000952 AB hydrolase 4, conserved site KEGG: 00051+3.1.1.-|KEGG: 00053+3.1.1.-|KEGG: 00363+3.1.1.-|KEGG: 00365+3.1.1.-|KEGG: 00534+3.1.1.-|KEGG: 00564+3.1.1.-|KEGG: 00623+3.1.1.-|KEGG: 00640+3.1.1.-|KEGG: 00830+3.1.1.-|KEGG: 00900+3.1.1.-|KEGG: 00940+3.1.1.-|KEGG: 00960+3.1.1.- APT61_RS01915 d5fb67fd388f7d662731f23f0713723f 340 SUPERFAMILY SSF53474 49 313 6.18E-37 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS01915 d5fb67fd388f7d662731f23f0713723f 340 Gene3D G3DSA:3.40.50.1820 261 336 8.5E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS01915 d5fb67fd388f7d662731f23f0713723f 340 Gene3D G3DSA:3.40.50.1820 56 185 8.5E-28 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS01915 d5fb67fd388f7d662731f23f0713723f 340 PANTHER PTHR10794 14 340 1.6E-88 T 22-04-2016 APT61_RS05330 940cb098700a4d8d22a587d489581137 174 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 20 165 3.8E-50 T 22-04-2016 IPR008136 CinA, C-terminal APT61_RS05330 940cb098700a4d8d22a587d489581137 174 PANTHER PTHR13939 11 174 9.8E-68 T 22-04-2016 APT61_RS05330 940cb098700a4d8d22a587d489581137 174 Gene3D G3DSA:3.90.950.20 10 166 8.7E-49 T 22-04-2016 IPR008136 CinA, C-terminal APT61_RS05330 940cb098700a4d8d22a587d489581137 174 SUPERFAMILY SSF142433 12 166 1.31E-47 T 22-04-2016 IPR008136 CinA, C-terminal APT61_RS05330 940cb098700a4d8d22a587d489581137 174 Pfam PF02464 Competence-damaged protein 13 165 6.5E-50 T 22-04-2016 IPR008136 CinA, C-terminal APT61_RS05330 940cb098700a4d8d22a587d489581137 174 PANTHER PTHR13939:SF4 11 174 9.8E-68 T 22-04-2016 APT61_RS11575 35d3f81eecebe3a337bf15aa8be6e9db 129 SUPERFAMILY SSF46689 64 112 9.86E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS11575 35d3f81eecebe3a337bf15aa8be6e9db 129 PANTHER PTHR11019:SF118 1 118 5.3E-70 T 22-04-2016 APT61_RS11575 35d3f81eecebe3a337bf15aa8be6e9db 129 Pfam PF12833 Helix-turn-helix domain 34 110 5.2E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS11575 35d3f81eecebe3a337bf15aa8be6e9db 129 Gene3D G3DSA:1.10.10.60 7 64 8.7E-24 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS11575 35d3f81eecebe3a337bf15aa8be6e9db 129 SUPERFAMILY SSF46689 12 61 3.27E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS11575 35d3f81eecebe3a337bf15aa8be6e9db 129 PANTHER PTHR11019 1 118 5.3E-70 T 22-04-2016 APT61_RS11575 35d3f81eecebe3a337bf15aa8be6e9db 129 Gene3D G3DSA:1.10.10.60 65 125 1.1E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS11575 35d3f81eecebe3a337bf15aa8be6e9db 129 SMART SM00342 27 110 6.6E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS11575 35d3f81eecebe3a337bf15aa8be6e9db 129 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 64 106 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS11315 0136ee313bdabfcc683d8cca499505e2 436 Pfam PF07805 HipA-like N-terminal domain 152 238 1.7E-20 T 22-04-2016 IPR012894 HipA, N-terminal subdomain 2 APT61_RS11315 0136ee313bdabfcc683d8cca499505e2 436 Pfam PF07804 HipA-like C-terminal domain 248 401 7.0E-31 T 22-04-2016 IPR012893 HipA-like, C-terminal APT61_RS11315 0136ee313bdabfcc683d8cca499505e2 436 Pfam PF13657 HipA N-terminal domain 6 105 2.2E-25 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 APT61_RS11315 0136ee313bdabfcc683d8cca499505e2 436 PANTHER PTHR37419:SF3 1 431 1.1E-124 T 22-04-2016 APT61_RS11315 0136ee313bdabfcc683d8cca499505e2 436 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 6 105 4.3E-29 T 22-04-2016 IPR017508 HipA, N-terminal subdomain 1 APT61_RS11315 0136ee313bdabfcc683d8cca499505e2 436 PANTHER PTHR37419 1 431 1.1E-124 T 22-04-2016 APT61_RS14540 5d79c26d0c02a30c7ea10abdd90d79cb 249 Pfam PF13247 4Fe-4S dicluster domain 94 187 1.2E-29 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS14540 5d79c26d0c02a30c7ea10abdd90d79cb 249 SUPERFAMILY SSF54862 42 222 1.67E-65 T 22-04-2016 APT61_RS14540 5d79c26d0c02a30c7ea10abdd90d79cb 249 PANTHER PTHR11938:SF86 1 227 2.2E-94 T 22-04-2016 APT61_RS14540 5d79c26d0c02a30c7ea10abdd90d79cb 249 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 132 143 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS14540 5d79c26d0c02a30c7ea10abdd90d79cb 249 PANTHER PTHR11938 1 227 2.2E-94 T 22-04-2016 APT61_RS14540 5d79c26d0c02a30c7ea10abdd90d79cb 249 Gene3D G3DSA:3.30.70.20 106 150 7.1E-24 T 22-04-2016 APT61_RS14540 5d79c26d0c02a30c7ea10abdd90d79cb 249 Gene3D G3DSA:3.30.70.20 42 104 1.4E-14 T 22-04-2016 APT61_RS14540 5d79c26d0c02a30c7ea10abdd90d79cb 249 Gene3D G3DSA:3.30.70.20 151 230 1.4E-26 T 22-04-2016 APT61_RS13595 7044288d5ab3cab3b69947c93249d5cf 834 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 471 715 1.8E-37 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APT61_RS13595 7044288d5ab3cab3b69947c93249d5cf 834 Pfam PF06791 Prophage tail length tape measure protein 54 256 3.2E-61 T 22-04-2016 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal APT61_RS13595 7044288d5ab3cab3b69947c93249d5cf 834 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 629 703 1.3E-20 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APT61_RS17895 8652a016b909083877b0df1a61ad9455 335 PANTHER PTHR23024 82 326 8.5E-94 T 22-04-2016 APT61_RS17895 8652a016b909083877b0df1a61ad9455 335 SUPERFAMILY SSF53474 48 334 3.78E-70 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS17895 8652a016b909083877b0df1a61ad9455 335 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 100 116 - T 22-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 APT61_RS17895 8652a016b909083877b0df1a61ad9455 335 Gene3D G3DSA:3.40.50.1820 27 335 2.7E-92 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS17895 8652a016b909083877b0df1a61ad9455 335 Pfam PF07859 alpha/beta hydrolase fold 101 307 4.9E-68 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APT61_RS17895 8652a016b909083877b0df1a61ad9455 335 PANTHER PTHR23024:SF128 82 326 8.5E-94 T 22-04-2016 APT61_RS16630 329785abcc88077e8b25aef82ec649bd 391 PANTHER PTHR11236 115 391 7.5E-153 T 22-04-2016 APT61_RS16630 329785abcc88077e8b25aef82ec649bd 391 Pfam PF00425 chorismate binding enzyme 128 380 2.1E-67 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APT61_RS16630 329785abcc88077e8b25aef82ec649bd 391 Gene3D G3DSA:3.60.120.10 101 389 3.5E-80 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APT61_RS16630 329785abcc88077e8b25aef82ec649bd 391 SUPERFAMILY SSF56322 19 389 2.49E-83 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APT61_RS16630 329785abcc88077e8b25aef82ec649bd 391 PANTHER PTHR11236:SF21 115 391 7.5E-153 T 22-04-2016 APT61_RS16630 329785abcc88077e8b25aef82ec649bd 391 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 109 387 1.3E-81 T 22-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 APT61_RS06135 5bcea0f6c890be41f3a03fcc4b05908d 213 SUPERFAMILY SSF53328 2 201 3.4E-65 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS06135 5bcea0f6c890be41f3a03fcc4b05908d 213 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS06135 5bcea0f6c890be41f3a03fcc4b05908d 213 PANTHER PTHR10520 1 194 8.9E-106 T 22-04-2016 APT61_RS06135 5bcea0f6c890be41f3a03fcc4b05908d 213 Gene3D G3DSA:3.40.50.170 1 194 2.2E-70 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS06135 5bcea0f6c890be41f3a03fcc4b05908d 213 Pfam PF00551 Formyl transferase 2 182 7.6E-67 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS06135 5bcea0f6c890be41f3a03fcc4b05908d 213 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 191 6.8E-81 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 APT61_RS06135 5bcea0f6c890be41f3a03fcc4b05908d 213 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.74 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 APT61_RS15100 a2b3eadcf10e2570a8ed50763855ae74 646 Pfam PF02687 FtsX-like permease family 525 639 4.9E-20 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APT61_RS15100 a2b3eadcf10e2570a8ed50763855ae74 646 PANTHER PTHR24220 312 321 1.5E-109 T 22-04-2016 APT61_RS15100 a2b3eadcf10e2570a8ed50763855ae74 646 PANTHER PTHR24220 6 233 1.5E-109 T 22-04-2016 APT61_RS15100 a2b3eadcf10e2570a8ed50763855ae74 646 Pfam PF00005 ABC transporter 24 172 6.9E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15100 a2b3eadcf10e2570a8ed50763855ae74 646 Pfam PF12704 MacB-like periplasmic core domain 270 489 3.6E-39 T 22-04-2016 IPR025857 MacB-like periplasmic core domain APT61_RS15100 a2b3eadcf10e2570a8ed50763855ae74 646 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS15100 a2b3eadcf10e2570a8ed50763855ae74 646 SUPERFAMILY SSF52540 4 225 6.84E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15100 a2b3eadcf10e2570a8ed50763855ae74 646 Gene3D G3DSA:3.40.50.300 3 227 8.3E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15100 a2b3eadcf10e2570a8ed50763855ae74 646 SMART SM00382 33 220 2.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15100 a2b3eadcf10e2570a8ed50763855ae74 646 PANTHER PTHR24220:SF86 312 321 1.5E-109 T 22-04-2016 APT61_RS15100 a2b3eadcf10e2570a8ed50763855ae74 646 PANTHER PTHR24220:SF86 6 233 1.5E-109 T 22-04-2016 APT61_RS12190 7c50bf96d6e5060158d268b91beff1a7 548 Gene3D G3DSA:3.20.130.10 348 537 3.3E-76 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APT61_RS12190 7c50bf96d6e5060158d268b91beff1a7 548 PANTHER PTHR30389 2 548 0.0 T 22-04-2016 APT61_RS12190 7c50bf96d6e5060158d268b91beff1a7 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 1.9E-83 T 22-04-2016 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 APT61_RS12190 7c50bf96d6e5060158d268b91beff1a7 548 Pfam PF05683 Fumarase C-terminus 332 537 9.4E-94 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APT61_RS12190 7c50bf96d6e5060158d268b91beff1a7 548 SUPERFAMILY SSF117457 361 536 2.62E-62 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APT61_RS12190 7c50bf96d6e5060158d268b91beff1a7 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APT61_RS12190 7c50bf96d6e5060158d268b91beff1a7 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 2.1E-61 T 22-04-2016 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 APT61_RS12190 7c50bf96d6e5060158d268b91beff1a7 548 PANTHER PTHR30389:SF6 2 548 0.0 T 22-04-2016 APT61_RS12190 7c50bf96d6e5060158d268b91beff1a7 548 PIRSF PIRSF001394 30 548 8.0E-234 T 22-04-2016 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS06440 ec7762980e2b05bcdcfc2bb65c216c13 731 Gene3D G3DSA:3.20.20.450 493 729 1.2E-64 T 22-04-2016 IPR001633 EAL domain APT61_RS06440 ec7762980e2b05bcdcfc2bb65c216c13 731 SMART SM00052 486 728 2.4E-75 T 22-04-2016 IPR001633 EAL domain APT61_RS06440 ec7762980e2b05bcdcfc2bb65c216c13 731 SMART SM00267 313 472 1.3E-11 T 22-04-2016 IPR000160 GGDEF domain APT61_RS06440 ec7762980e2b05bcdcfc2bb65c216c13 731 SUPERFAMILY SSF55073 329 449 7.85E-7 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS06440 ec7762980e2b05bcdcfc2bb65c216c13 731 SUPERFAMILY SSF141868 493 729 1.31E-65 T 22-04-2016 IPR001633 EAL domain APT61_RS06440 ec7762980e2b05bcdcfc2bb65c216c13 731 Gene3D G3DSA:3.30.70.270 326 449 1.4E-4 T 22-04-2016 APT61_RS06440 ec7762980e2b05bcdcfc2bb65c216c13 731 PANTHER PTHR33121 441 728 2.2E-289 T 22-04-2016 APT61_RS06440 ec7762980e2b05bcdcfc2bb65c216c13 731 PANTHER PTHR33121 123 413 2.2E-289 T 22-04-2016 APT61_RS06440 ec7762980e2b05bcdcfc2bb65c216c13 731 Pfam PF00563 EAL domain 493 723 1.6E-55 T 22-04-2016 IPR001633 EAL domain APT61_RS06440 ec7762980e2b05bcdcfc2bb65c216c13 731 PANTHER PTHR33121:SF11 441 728 2.2E-289 T 22-04-2016 APT61_RS06440 ec7762980e2b05bcdcfc2bb65c216c13 731 PANTHER PTHR33121:SF11 123 413 2.2E-289 T 22-04-2016 APT61_RS06440 ec7762980e2b05bcdcfc2bb65c216c13 731 Pfam PF00990 Diguanylate cyclase, GGDEF domain 324 444 3.8E-5 T 22-04-2016 IPR000160 GGDEF domain APT61_RS06440 ec7762980e2b05bcdcfc2bb65c216c13 731 Pfam PF05231 MASE1 15 313 2.5E-32 T 22-04-2016 IPR007895 MASE1 APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 Gene3D G3DSA:3.40.50.300 312 565 8.7E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 Gene3D G3DSA:3.40.50.300 11 270 1.9E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 SUPERFAMILY SSF52540 12 268 1.25E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 SUPERFAMILY SSF52540 313 563 2.28E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 279 1.3E-7 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 543 578 1.1E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 PANTHER PTHR24220 296 324 3.3E-222 T 22-04-2016 APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 PANTHER PTHR24220 340 450 3.3E-222 T 22-04-2016 APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 PANTHER PTHR24220 14 275 3.3E-222 T 22-04-2016 APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 Pfam PF00005 ABC transporter 32 196 3.3E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 Pfam PF00005 ABC transporter 341 490 1.1E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 PANTHER PTHR24220:SF442 296 324 3.3E-222 T 22-04-2016 APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 PANTHER PTHR24220:SF442 340 450 3.3E-222 T 22-04-2016 APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 PANTHER PTHR24220:SF442 14 275 3.3E-222 T 22-04-2016 APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 ProSitePatterns PS00211 ABC transporters family signature. 464 478 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 SMART SM00382 349 549 6.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 SMART SM00382 41 246 2.4E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15550 ae7ca6985ad46d54f03233617b2aea94 623 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 SUPERFAMILY SSF53706 1 638 2.09E-231 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 Pfam PF00384 Molybdopterin oxidoreductase 2 379 3.5E-21 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 715 742 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 Gene3D G3DSA:2.40.40.20 602 803 2.3E-50 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 PANTHER PTHR11615 397 481 1.5E-303 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 PANTHER PTHR11615 1 182 1.5E-303 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 PANTHER PTHR11615 667 802 1.5E-303 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 PANTHER PTHR11615 286 380 1.5E-303 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 PANTHER PTHR11615 573 646 1.5E-303 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 PANTHER PTHR11615 210 247 1.5E-303 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 PANTHER PTHR11615:SF149 397 481 1.5E-303 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 PANTHER PTHR11615:SF149 1 182 1.5E-303 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 PANTHER PTHR11615:SF149 667 802 1.5E-303 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 PANTHER PTHR11615:SF149 286 380 1.5E-303 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 PANTHER PTHR11615:SF149 573 646 1.5E-303 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 PANTHER PTHR11615:SF149 210 247 1.5E-303 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 SUPERFAMILY SSF50692 641 803 1.08E-43 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 Pfam PF01568 Molydopterin dinucleotide binding domain 681 796 3.3E-17 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 802 0.0 T 22-04-2016 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 Gene3D G3DSA:3.40.50.740 320 470 5.2E-59 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 Gene3D G3DSA:3.40.228.10 1 108 4.7E-69 T 22-04-2016 APT61_RS11095 8a0f5dfb06de1da87e5349361ef152ce 803 Gene3D G3DSA:3.40.228.10 152 261 4.7E-69 T 22-04-2016 APT61_RS14080 7565c04b680d574036d473bc1259c40b 234 Pfam PF13861 FlgD Tudor-like domain 89 231 3.2E-15 T 22-04-2016 IPR025963 FlgD Tudor-like domain APT61_RS14080 7565c04b680d574036d473bc1259c40b 234 PANTHER PTHR30435:SF15 18 219 4.5E-65 T 22-04-2016 APT61_RS14080 7565c04b680d574036d473bc1259c40b 234 PANTHER PTHR30435 18 219 4.5E-65 T 22-04-2016 APT61_RS14080 7565c04b680d574036d473bc1259c40b 234 Pfam PF13860 FlgD Ig-like domain 121 191 1.3E-23 T 22-04-2016 IPR025965 FlgD Ig-like domain APT61_RS14080 7565c04b680d574036d473bc1259c40b 234 Pfam PF03963 Flagellar hook capping protein - N-terminal region 11 81 9.8E-24 T 22-04-2016 IPR005648 Flagellar hook capping protein APT61_RS17210 46a77503437b9525c45c6defebd8f8ef 473 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 64 2.3E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS17210 46a77503437b9525c45c6defebd8f8ef 473 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 64 80 2.3E-7 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS17210 46a77503437b9525c45c6defebd8f8ef 473 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 90 1.7E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS17210 46a77503437b9525c45c6defebd8f8ef 473 SUPERFAMILY SSF53383 102 457 2.25E-81 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS17210 46a77503437b9525c45c6defebd8f8ef 473 Pfam PF00155 Aminotransferase class I and II 142 454 1.1E-26 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS17210 46a77503437b9525c45c6defebd8f8ef 473 Gene3D G3DSA:1.10.10.10 22 91 5.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17210 46a77503437b9525c45c6defebd8f8ef 473 SMART SM00345 31 90 2.2E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS17210 46a77503437b9525c45c6defebd8f8ef 473 Gene3D G3DSA:3.40.640.10 129 328 3.4E-47 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS17210 46a77503437b9525c45c6defebd8f8ef 473 PANTHER PTHR11751:SF294 83 454 1.9E-79 T 22-04-2016 APT61_RS17210 46a77503437b9525c45c6defebd8f8ef 473 SUPERFAMILY SSF46785 22 94 1.34E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17210 46a77503437b9525c45c6defebd8f8ef 473 PANTHER PTHR11751 83 454 1.9E-79 T 22-04-2016 APT61_RS17210 46a77503437b9525c45c6defebd8f8ef 473 Gene3D G3DSA:3.90.1150.10 329 456 6.0E-20 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 Gene3D G3DSA:3.30.499.10 335 465 2.1E-63 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 Gene3D G3DSA:3.30.499.10 2 158 4.3E-23 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 PANTHER PTHR11670:SF38 1 307 1.1E-271 T 22-04-2016 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 PANTHER PTHR11670:SF38 327 466 1.1E-271 T 22-04-2016 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 PRINTS PR00415 Aconitase family signature 108 116 2.0E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 PRINTS PR00415 Aconitase family signature 133 148 2.0E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 PRINTS PR00415 Aconitase family signature 119 132 2.0E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 PRINTS PR00415 Aconitase family signature 209 222 2.0E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 PRINTS PR00415 Aconitase family signature 286 300 2.0E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 PRINTS PR00415 Aconitase family signature 343 354 2.0E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 PRINTS PR00415 Aconitase family signature 399 412 2.0E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 PRINTS PR00415 Aconitase family signature 195 208 2.0E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 PRINTS PR00415 Aconitase family signature 82 95 2.0E-50 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 2.7E-155 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 Gene3D G3DSA:3.40.1060.10 166 279 6.5E-39 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 4.7E-276 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 SUPERFAMILY SSF53732 2 465 1.44E-166 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 61.763 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 PANTHER PTHR11670 1 307 1.1E-271 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS18690 5137e21f6f43e906d9c2070fb0821d0d 466 PANTHER PTHR11670 327 466 1.1E-271 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS20020 d46368437bc4328b7078871fb7e2fef5 450 Pfam PF01523 Putative modulator of DNA gyrase 36 326 1.5E-54 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS20020 d46368437bc4328b7078871fb7e2fef5 450 PANTHER PTHR30624:SF1 6 450 7.1E-190 T 22-04-2016 APT61_RS20020 d46368437bc4328b7078871fb7e2fef5 450 PANTHER PTHR30624 6 450 7.1E-190 T 22-04-2016 APT61_RS20020 d46368437bc4328b7078871fb7e2fef5 450 SUPERFAMILY SSF111283 18 449 4.97E-130 T 22-04-2016 APT61_RS05980 178b7eedeb6982b0deee98d945ee0aec 455 PANTHER PTHR32092:SF7 6 447 9.7E-195 T 22-04-2016 APT61_RS05980 178b7eedeb6982b0deee98d945ee0aec 455 SUPERFAMILY SSF51735 8 167 1.7E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05980 178b7eedeb6982b0deee98d945ee0aec 455 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.1E-37 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS05980 178b7eedeb6982b0deee98d945ee0aec 455 PRINTS PR00732 Glycosyl hydrolase family 4 signature 76 92 1.1E-37 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS05980 178b7eedeb6982b0deee98d945ee0aec 455 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.1E-37 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS05980 178b7eedeb6982b0deee98d945ee0aec 455 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 1.1E-37 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS05980 178b7eedeb6982b0deee98d945ee0aec 455 PRINTS PR00732 Glycosyl hydrolase family 4 signature 111 131 1.1E-37 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS05980 178b7eedeb6982b0deee98d945ee0aec 455 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 1.1E-37 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS05980 178b7eedeb6982b0deee98d945ee0aec 455 PANTHER PTHR32092 6 447 9.7E-195 T 22-04-2016 APT61_RS05980 178b7eedeb6982b0deee98d945ee0aec 455 Gene3D G3DSA:3.90.110.10 170 442 1.9E-97 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APT61_RS05980 178b7eedeb6982b0deee98d945ee0aec 455 Pfam PF02056 Family 4 glycosyl hydrolase 9 186 2.3E-49 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS05980 178b7eedeb6982b0deee98d945ee0aec 455 Gene3D G3DSA:3.40.50.720 7 168 2.3E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05980 178b7eedeb6982b0deee98d945ee0aec 455 SUPERFAMILY SSF56327 171 444 9.71E-81 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APT61_RS05980 178b7eedeb6982b0deee98d945ee0aec 455 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 419 1.9E-47 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 APT61_RS14115 2943b3cc44fa881da0657b622f196c43 307 PANTHER PTHR22604:SF126 3 303 4.9E-134 T 22-04-2016 APT61_RS14115 2943b3cc44fa881da0657b622f196c43 307 SUPERFAMILY SSF51735 3 137 5.69E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS14115 2943b3cc44fa881da0657b622f196c43 307 Gene3D G3DSA:3.30.360.10 129 306 4.5E-69 T 22-04-2016 APT61_RS14115 2943b3cc44fa881da0657b622f196c43 307 PANTHER PTHR22604 3 303 4.9E-134 T 22-04-2016 APT61_RS14115 2943b3cc44fa881da0657b622f196c43 307 Gene3D G3DSA:3.40.50.720 3 128 5.0E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS14115 2943b3cc44fa881da0657b622f196c43 307 SUPERFAMILY SSF55347 123 264 3.05E-45 T 22-04-2016 APT61_RS14115 2943b3cc44fa881da0657b622f196c43 307 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 3.5E-27 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APT61_RS18200 7c34efa9f9c4ef3874fec21dd45e77a1 262 Gene3D G3DSA:1.20.1180.10 197 262 3.7E-28 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APT61_RS18200 7c34efa9f9c4ef3874fec21dd45e77a1 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 2.7E-30 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APT61_RS18200 7c34efa9f9c4ef3874fec21dd45e77a1 262 Gene3D G3DSA:2.160.10.10 4 194 1.9E-51 T 22-04-2016 APT61_RS18200 7c34efa9f9c4ef3874fec21dd45e77a1 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 52 5.9E-9 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS18200 7c34efa9f9c4ef3874fec21dd45e77a1 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 6.0E-8 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS18200 7c34efa9f9c4ef3874fec21dd45e77a1 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APT61_RS18200 7c34efa9f9c4ef3874fec21dd45e77a1 262 PANTHER PTHR23416 1 254 8.7E-144 T 22-04-2016 APT61_RS18200 7c34efa9f9c4ef3874fec21dd45e77a1 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APT61_RS18200 7c34efa9f9c4ef3874fec21dd45e77a1 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 8.1E-113 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APT61_RS18200 7c34efa9f9c4ef3874fec21dd45e77a1 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 48.831 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APT61_RS18200 7c34efa9f9c4ef3874fec21dd45e77a1 262 PIRSF PIRSF000456 4 262 2.2E-108 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 APT61_RS18200 7c34efa9f9c4ef3874fec21dd45e77a1 262 PANTHER PTHR23416:SF8 1 254 8.7E-144 T 22-04-2016 APT61_RS18200 7c34efa9f9c4ef3874fec21dd45e77a1 262 SUPERFAMILY SSF51161 2 262 1.36E-82 T 22-04-2016 IPR011004 Trimeric LpxA-like APT61_RS13745 70982a3c2de37cf1f3fd0bcc79fa8db3 129 SUPERFAMILY SSF47413 3 73 3.38E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS13745 70982a3c2de37cf1f3fd0bcc79fa8db3 129 Pfam PF13560 Helix-turn-helix domain 8 64 4.4E-10 T 22-04-2016 APT61_RS13745 70982a3c2de37cf1f3fd0bcc79fa8db3 129 Gene3D G3DSA:1.10.260.40 8 106 1.3E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS13745 70982a3c2de37cf1f3fd0bcc79fa8db3 129 SMART SM00530 11 67 3.6E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS06925 3c08d6ae8ee3054d2f6406af13bd4545 258 PANTHER PTHR10992:SF698 15 252 1.4E-55 T 22-04-2016 APT61_RS06925 3c08d6ae8ee3054d2f6406af13bd4545 258 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 10 251 34.605 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APT61_RS06925 3c08d6ae8ee3054d2f6406af13bd4545 258 PANTHER PTHR10992 15 252 1.4E-55 T 22-04-2016 APT61_RS06925 3c08d6ae8ee3054d2f6406af13bd4545 258 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 14 250 1.0E-79 T 22-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APT61_RS06925 3c08d6ae8ee3054d2f6406af13bd4545 258 SUPERFAMILY SSF53474 7 250 1.55E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS06925 3c08d6ae8ee3054d2f6406af13bd4545 258 Gene3D G3DSA:3.40.50.1820 10 251 1.4E-56 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS06925 3c08d6ae8ee3054d2f6406af13bd4545 258 Pfam PF12697 Alpha/beta hydrolase family 17 245 1.8E-15 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 Gene3D G3DSA:3.40.50.970 242 334 4.5E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 Gene3D G3DSA:3.40.50.970 26 201 4.5E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 PANTHER PTHR11624:SF20 24 218 0.0 T 22-04-2016 APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 PANTHER PTHR11624:SF20 241 619 0.0 T 22-04-2016 APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 Gene3D G3DSA:3.40.50.970 335 495 1.5E-33 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 SUPERFAMILY SSF52922 491 619 3.53E-31 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 Gene3D G3DSA:3.40.50.920 496 619 9.8E-35 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 620 0.0 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 6.3E-39 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 SMART SM00861 319 484 5.7E-67 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 SUPERFAMILY SSF52518 317 504 7.44E-57 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.001 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 PANTHER PTHR11624 24 218 0.0 T 22-04-2016 IPR033247 Transketolase family APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 PANTHER PTHR11624 241 619 0.0 T 22-04-2016 IPR033247 Transketolase family APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 SUPERFAMILY SSF52518 10 199 2.68E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 SUPERFAMILY SSF52518 243 381 2.68E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 Pfam PF02780 Transketolase, C-terminal domain 495 611 1.1E-25 T 22-04-2016 IPR033248 Transketolase, C-terminal domain APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 282 2.6E-116 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APT61_RS17405 9d6f281d07e42a0a842d1dca34bdd53e 620 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APT61_RS10530 4195cc9bf78badd2b9b43e807204b2ea 502 PRINTS PR00878 Cholinesterase signature 400 412 4.2E-6 T 22-04-2016 IPR000997 Cholinesterase GO:0004104 APT61_RS10530 4195cc9bf78badd2b9b43e807204b2ea 502 PRINTS PR00878 Cholinesterase signature 108 137 4.2E-6 T 22-04-2016 IPR000997 Cholinesterase GO:0004104 APT61_RS10530 4195cc9bf78badd2b9b43e807204b2ea 502 SUPERFAMILY SSF53474 5 497 1.01E-114 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS10530 4195cc9bf78badd2b9b43e807204b2ea 502 PANTHER PTHR11559:SF142 2 497 3.0E-156 T 22-04-2016 APT61_RS10530 4195cc9bf78badd2b9b43e807204b2ea 502 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 84 94 - T 22-04-2016 IPR019819 Carboxylesterase type B, conserved site APT61_RS10530 4195cc9bf78badd2b9b43e807204b2ea 502 Gene3D G3DSA:3.40.50.1820 3 497 1.6E-132 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS10530 4195cc9bf78badd2b9b43e807204b2ea 502 Pfam PF00135 Carboxylesterase family 6 328 3.7E-88 T 22-04-2016 IPR002018 Carboxylesterase, type B APT61_RS10530 4195cc9bf78badd2b9b43e807204b2ea 502 Pfam PF00135 Carboxylesterase family 353 475 9.6E-14 T 22-04-2016 IPR002018 Carboxylesterase, type B APT61_RS10530 4195cc9bf78badd2b9b43e807204b2ea 502 PANTHER PTHR11559 2 497 3.0E-156 T 22-04-2016 APT61_RS10530 4195cc9bf78badd2b9b43e807204b2ea 502 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 182 197 - T 22-04-2016 IPR019826 Carboxylesterase type B, active site APT61_RS20195 c28afc00ace2aff501edc905ecd6ad46 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 2.5E-27 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APT61_RS20195 c28afc00ace2aff501edc905ecd6ad46 206 SUPERFAMILY SSF54534 8 205 1.89E-55 T 22-04-2016 APT61_RS20195 c28afc00ace2aff501edc905ecd6ad46 206 PANTHER PTHR10516:SF320 47 205 1.6E-64 T 22-04-2016 APT61_RS20195 c28afc00ace2aff501edc905ecd6ad46 206 PANTHER PTHR10516:SF320 14 28 1.6E-64 T 22-04-2016 APT61_RS20195 c28afc00ace2aff501edc905ecd6ad46 206 Gene3D G3DSA:1.10.287.460 2 88 1.7E-24 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APT61_RS20195 c28afc00ace2aff501edc905ecd6ad46 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 8.2E-22 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APT61_RS20195 c28afc00ace2aff501edc905ecd6ad46 206 PANTHER PTHR10516 47 205 1.6E-64 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APT61_RS20195 c28afc00ace2aff501edc905ecd6ad46 206 PANTHER PTHR10516 14 28 1.6E-64 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APT61_RS20195 c28afc00ace2aff501edc905ecd6ad46 206 Gene3D G3DSA:3.10.50.40 89 205 3.1E-50 T 22-04-2016 APT61_RS16605 71dc50c481015f6709fc28b2a4ce20f7 370 Gene3D G3DSA:3.40.630.10 285 367 6.8E-43 T 22-04-2016 APT61_RS16605 71dc50c481015f6709fc28b2a4ce20f7 370 Gene3D G3DSA:3.40.630.10 2 175 6.8E-43 T 22-04-2016 APT61_RS16605 71dc50c481015f6709fc28b2a4ce20f7 370 PANTHER PTHR11014 6 370 5.5E-76 T 22-04-2016 APT61_RS16605 71dc50c481015f6709fc28b2a4ce20f7 370 Pfam PF01546 Peptidase family M20/M25/M40 71 367 2.2E-23 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APT61_RS16605 71dc50c481015f6709fc28b2a4ce20f7 370 Gene3D G3DSA:3.30.70.360 176 280 2.0E-29 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS16605 71dc50c481015f6709fc28b2a4ce20f7 370 SUPERFAMILY SSF55031 175 282 4.32E-25 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS16605 71dc50c481015f6709fc28b2a4ce20f7 370 PANTHER PTHR11014:SF64 6 370 5.5E-76 T 22-04-2016 APT61_RS16605 71dc50c481015f6709fc28b2a4ce20f7 370 PIRSF PIRSF037238 1 370 1.3E-130 T 22-04-2016 IPR017150 Peptidase M20, glutamate carboxypeptidase APT61_RS16605 71dc50c481015f6709fc28b2a4ce20f7 370 SUPERFAMILY SSF53187 296 367 7.65E-44 T 22-04-2016 APT61_RS16605 71dc50c481015f6709fc28b2a4ce20f7 370 SUPERFAMILY SSF53187 2 184 7.65E-44 T 22-04-2016 APT61_RS16605 71dc50c481015f6709fc28b2a4ce20f7 370 Pfam PF07687 Peptidase dimerisation domain 173 271 1.2E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS09750 430ead4bcb0459158ae96a767177e914 465 Pfam PF04317 YcjX-like family, DUF463 20 464 2.1E-184 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein APT61_RS09750 430ead4bcb0459158ae96a767177e914 465 PANTHER PTHR38605 1 465 1.4E-258 T 22-04-2016 APT61_RS09750 430ead4bcb0459158ae96a767177e914 465 PANTHER PTHR38605:SF1 1 465 1.4E-258 T 22-04-2016 APT61_RS09750 430ead4bcb0459158ae96a767177e914 465 PIRSF PIRSF019381 1 465 7.3E-215 T 22-04-2016 IPR007413 Protein of unknown function DUF463, YcjX-like protein APT61_RS01955 06c0f22fa5bcaf94d88b74bd555d31a1 298 Pfam PF00698 Acyl transferase domain 5 273 4.6E-25 T 22-04-2016 IPR014043 Acyl transferase APT61_RS01955 06c0f22fa5bcaf94d88b74bd555d31a1 298 TIGRFAM TIGR03131 malonate_mdcH: malonate decarboxylase, epsilon subunit 3 287 3.6E-93 T 22-04-2016 IPR017554 Malonate decarboxylase, McdH subunit APT61_RS01955 06c0f22fa5bcaf94d88b74bd555d31a1 298 Gene3D G3DSA:3.40.366.10 2 111 2.5E-44 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APT61_RS01955 06c0f22fa5bcaf94d88b74bd555d31a1 298 Gene3D G3DSA:3.40.366.10 181 275 2.5E-44 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 APT61_RS01955 06c0f22fa5bcaf94d88b74bd555d31a1 298 PANTHER PTHR10982 1 266 3.6E-54 T 22-04-2016 APT61_RS01955 06c0f22fa5bcaf94d88b74bd555d31a1 298 Gene3D G3DSA:3.30.70.250 119 180 3.7E-14 T 22-04-2016 APT61_RS01955 06c0f22fa5bcaf94d88b74bd555d31a1 298 SUPERFAMILY SSF55048 118 175 8.5E-11 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 APT61_RS01955 06c0f22fa5bcaf94d88b74bd555d31a1 298 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 6 286 1.2E-16 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain APT61_RS01955 06c0f22fa5bcaf94d88b74bd555d31a1 298 PIRSF PIRSF000446 1 292 6.7E-55 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 APT61_RS01955 06c0f22fa5bcaf94d88b74bd555d31a1 298 SUPERFAMILY SSF52151 182 278 1.26E-46 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APT61_RS01955 06c0f22fa5bcaf94d88b74bd555d31a1 298 SUPERFAMILY SSF52151 2 117 1.26E-46 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APT61_RS06420 097ec5cd5cdcd35a18b413019d360155 131 Pfam PF07037 Putative transcription regulator (DUF1323) 8 128 8.2E-44 T 22-04-2016 IPR010749 Protein of unknown function DUF1323 APT61_RS06420 097ec5cd5cdcd35a18b413019d360155 131 Gene3D G3DSA:1.10.10.10 7 60 9.7E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS06420 097ec5cd5cdcd35a18b413019d360155 131 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 8 128 2.0E-32 T 22-04-2016 IPR010749 Protein of unknown function DUF1323 APT61_RS06420 097ec5cd5cdcd35a18b413019d360155 131 SUPERFAMILY SSF46955 5 81 2.14E-11 T 22-04-2016 IPR009061 Putative DNA-binding domain APT61_RS12725 21db8bfb2caedc376977cd921d077ff6 214 SUPERFAMILY SSF63380 1 93 1.19E-26 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APT61_RS12725 21db8bfb2caedc376977cd921d077ff6 214 Gene3D G3DSA:2.40.30.20 105 199 2.9E-27 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS12725 21db8bfb2caedc376977cd921d077ff6 214 Gene3D G3DSA:2.40.30.20 5 104 6.3E-31 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS12725 21db8bfb2caedc376977cd921d077ff6 214 Pfam PF00677 Lumazine binding domain 100 185 7.8E-20 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APT61_RS12725 21db8bfb2caedc376977cd921d077ff6 214 Pfam PF00677 Lumazine binding domain 3 87 3.2E-20 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APT61_RS12725 21db8bfb2caedc376977cd921d077ff6 214 PANTHER PTHR21098 1 203 8.5E-135 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APT61_RS12725 21db8bfb2caedc376977cd921d077ff6 214 SUPERFAMILY SSF63380 94 200 1.87E-32 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APT61_RS12725 21db8bfb2caedc376977cd921d077ff6 214 PANTHER PTHR21098:SF4 1 203 8.5E-135 T 22-04-2016 APT61_RS12725 21db8bfb2caedc376977cd921d077ff6 214 PIRSF PIRSF000498 1 212 2.4E-75 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APT61_RS12725 21db8bfb2caedc376977cd921d077ff6 214 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 4.1E-89 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 APT61_RS02100 4162297fa74d25885e3e424e90b51504 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.65 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02100 4162297fa74d25885e3e424e90b51504 63 PANTHER PTHR10916 1 63 1.3E-29 T 22-04-2016 APT61_RS02100 4162297fa74d25885e3e424e90b51504 63 SUPERFAMILY SSF46561 1 61 6.41E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02100 4162297fa74d25885e3e424e90b51504 63 Gene3D G3DSA:1.10.287.310 1 60 5.4E-28 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02100 4162297fa74d25885e3e424e90b51504 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02100 4162297fa74d25885e3e424e90b51504 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 1.6E-22 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02100 4162297fa74d25885e3e424e90b51504 63 Pfam PF00831 Ribosomal L29 protein 4 60 2.8E-23 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS14800 48d59d6587e79e10b7346e9144c95c2c 417 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 408 7.3E-180 T 22-04-2016 IPR005219 Conserved hypothetical protein CHP00155 APT61_RS14800 48d59d6587e79e10b7346e9144c95c2c 417 PANTHER PTHR30462 1 416 2.9E-256 T 22-04-2016 APT61_RS14800 48d59d6587e79e10b7346e9144c95c2c 417 PANTHER PTHR30462:SF3 1 416 2.9E-256 T 22-04-2016 APT61_RS14800 48d59d6587e79e10b7346e9144c95c2c 417 Pfam PF04403 Paraquat-inducible protein A 253 408 6.3E-54 T 22-04-2016 IPR007498 Paraquat-inducible protein A APT61_RS14800 48d59d6587e79e10b7346e9144c95c2c 417 Pfam PF04403 Paraquat-inducible protein A 49 200 9.1E-40 T 22-04-2016 IPR007498 Paraquat-inducible protein A APT61_RS10985 48bb97edd9e93312c768957b38b7d8db 82 PANTHER PTHR40516 3 80 2.3E-14 T 22-04-2016 APT61_RS10985 48bb97edd9e93312c768957b38b7d8db 82 SMART SM00966 7 53 8.5E-8 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APT61_RS10985 48bb97edd9e93312c768957b38b7d8db 82 SUPERFAMILY SSF89447 3 75 2.96E-15 T 22-04-2016 APT61_RS10985 48bb97edd9e93312c768957b38b7d8db 82 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 51 1.1E-7 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APT61_RS10985 48bb97edd9e93312c768957b38b7d8db 82 Gene3D G3DSA:2.10.260.10 2 81 1.4E-25 T 22-04-2016 APT61_RS16725 0e193bc30c776dcc0aa10b9a11ddb450 499 SUPERFAMILY SSF53067 257 496 4.4E-60 T 22-04-2016 APT61_RS16725 0e193bc30c776dcc0aa10b9a11ddb450 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 251 2.9E-61 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APT61_RS16725 0e193bc30c776dcc0aa10b9a11ddb450 499 Gene3D G3DSA:3.30.420.40 3 251 2.2E-78 T 22-04-2016 APT61_RS16725 0e193bc30c776dcc0aa10b9a11ddb450 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 366 386 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APT61_RS16725 0e193bc30c776dcc0aa10b9a11ddb450 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 453 7.7E-43 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APT61_RS16725 0e193bc30c776dcc0aa10b9a11ddb450 499 SUPERFAMILY SSF53067 7 254 1.47E-75 T 22-04-2016 APT61_RS16725 0e193bc30c776dcc0aa10b9a11ddb450 499 PIRSF PIRSF000538 5 499 8.5E-125 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APT61_RS16725 0e193bc30c776dcc0aa10b9a11ddb450 499 PANTHER PTHR10196 1 498 3.9E-159 T 22-04-2016 APT61_RS16725 0e193bc30c776dcc0aa10b9a11ddb450 499 PANTHER PTHR10196:SF9 1 498 3.9E-159 T 22-04-2016 APT61_RS16725 0e193bc30c776dcc0aa10b9a11ddb450 499 Gene3D G3DSA:3.30.420.40 258 498 1.3E-65 T 22-04-2016 APT61_RS12565 56206b4fac8254167ebb9818b74f01bb 206 PANTHER PTHR36118 1 206 5.4E-77 T 22-04-2016 APT61_RS12565 56206b4fac8254167ebb9818b74f01bb 206 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 193 26.43 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 APT61_RS12565 56206b4fac8254167ebb9818b74f01bb 206 PANTHER PTHR36118:SF1 1 206 5.4E-77 T 22-04-2016 APT61_RS12565 56206b4fac8254167ebb9818b74f01bb 206 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 192 7.1E-65 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 APT61_RS12565 56206b4fac8254167ebb9818b74f01bb 206 PIRSF PIRSF006091 1 204 6.8E-67 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 APT61_RS12565 56206b4fac8254167ebb9818b74f01bb 206 Pfam PF04205 FMN-binding domain 99 187 2.8E-19 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APT61_RS12565 56206b4fac8254167ebb9818b74f01bb 206 SMART SM00900 99 191 6.6E-33 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APT61_RS13165 d86d3a8bf02973ae73dc2c4ca77d0f00 441 SUPERFAMILY SSF55909 3 441 1.86E-203 T 22-04-2016 APT61_RS13165 d86d3a8bf02973ae73dc2c4ca77d0f00 441 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 440 1.1E-230 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 APT61_RS13165 d86d3a8bf02973ae73dc2c4ca77d0f00 441 PANTHER PTHR30420:SF2 2 441 5.9E-301 T 22-04-2016 APT61_RS13165 d86d3a8bf02973ae73dc2c4ca77d0f00 441 Gene3D G3DSA:3.75.10.20 1 441 5.9E-227 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 APT61_RS13165 d86d3a8bf02973ae73dc2c4ca77d0f00 441 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 441 58.173 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 APT61_RS13165 d86d3a8bf02973ae73dc2c4ca77d0f00 441 Pfam PF04996 Succinylarginine dihydrolase 3 440 1.6E-210 T 22-04-2016 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23|UniPathway: UPA00185 APT61_RS13165 d86d3a8bf02973ae73dc2c4ca77d0f00 441 PANTHER PTHR30420 2 441 5.9E-301 T 22-04-2016 APT61_RS08440 44782a01db58f4b2a6e04bb6dd2451e6 252 Gene3D G3DSA:2.60.40.1070 167 238 8.4E-4 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APT61_RS08440 44782a01db58f4b2a6e04bb6dd2451e6 252 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 39 149 4.4E-20 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 APT61_RS08440 44782a01db58f4b2a6e04bb6dd2451e6 252 SUPERFAMILY SSF49354 25 151 1.36E-25 T 22-04-2016 IPR008962 PapD-like APT61_RS08440 44782a01db58f4b2a6e04bb6dd2451e6 252 PANTHER PTHR30251 1 251 1.6E-62 T 22-04-2016 APT61_RS08440 44782a01db58f4b2a6e04bb6dd2451e6 252 PANTHER PTHR30251:SF4 1 251 1.6E-62 T 22-04-2016 APT61_RS08440 44782a01db58f4b2a6e04bb6dd2451e6 252 Gene3D G3DSA:2.60.40.360 31 151 2.2E-19 T 22-04-2016 IPR008962 PapD-like APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 Gene3D G3DSA:3.40.50.280 744 895 1.1E-65 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 TIGRFAM TIGR02082 metH: methionine synthase 12 1192 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 Pfam PF02607 B12 binding domain 660 733 3.2E-25 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 Gene3D G3DSA:3.20.20.20 364 636 4.0E-115 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 Gene3D G3DSA:3.10.196.10 957 1226 1.1E-115 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 938 1208 1.7E-126 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 Pfam PF02310 B12 binding domain 748 840 3.7E-18 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 Gene3D G3DSA:3.20.20.330 3 363 1.9E-126 T 22-04-2016 IPR003726 Homocysteine-binding domain APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 Gene3D G3DSA:1.10.1240.10 650 737 2.9E-40 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 Pfam PF00809 Pterin binding enzyme 360 598 1.7E-62 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 SMART SM01018 657 740 6.4E-45 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 SUPERFAMILY SSF47644 653 739 5.1E-29 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 SUPERFAMILY SSF52242 742 894 1.31E-47 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 PANTHER PTHR21091:SF111 5 402 8.1E-166 T 22-04-2016 APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 PIRSF PIRSF000381 1 1195 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 PANTHER PTHR21091 5 402 8.1E-166 T 22-04-2016 APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 SUPERFAMILY SSF51717 356 630 2.62E-89 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 SUPERFAMILY SSF82282 7 399 1.57E-117 T 22-04-2016 IPR003726 Homocysteine-binding domain APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 SUPERFAMILY SSF56507 903 1226 2.35E-134 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 APT61_RS21050 c930b1d781c31834704f3747af766f03 1227 Pfam PF02574 Homocysteine S-methyltransferase 17 325 2.9E-91 T 22-04-2016 IPR003726 Homocysteine-binding domain APT61_RS13220 4c699f7a9789c763575f689ff5615f2c 190 PANTHER PTHR34846:SF2 22 176 4.0E-14 T 22-04-2016 APT61_RS13220 4c699f7a9789c763575f689ff5615f2c 190 SUPERFAMILY SSF69118 10 179 2.16E-45 T 22-04-2016 IPR029032 AhpD-like APT61_RS13220 4c699f7a9789c763575f689ff5615f2c 190 Pfam PF02627 Carboxymuconolactone decarboxylase family 44 128 2.5E-11 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS13220 4c699f7a9789c763575f689ff5615f2c 190 PANTHER PTHR34846 22 176 4.0E-14 T 22-04-2016 APT61_RS13220 4c699f7a9789c763575f689ff5615f2c 190 Gene3D G3DSA:1.20.1290.10 34 181 6.3E-41 T 22-04-2016 IPR029032 AhpD-like APT61_RS12635 9bca37f40ff386b71bb8a102e62a3986 285 PANTHER PTHR30367:SF5 1 281 1.3E-145 T 22-04-2016 APT61_RS12635 9bca37f40ff386b71bb8a102e62a3986 285 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 226 6.9E-40 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APT61_RS12635 9bca37f40ff386b71bb8a102e62a3986 285 SUPERFAMILY SSF111369 40 217 4.97E-25 T 22-04-2016 APT61_RS12635 9bca37f40ff386b71bb8a102e62a3986 285 Gene3D G3DSA:2.40.50.100 149 182 4.9E-20 T 22-04-2016 APT61_RS12635 9bca37f40ff386b71bb8a102e62a3986 285 Gene3D G3DSA:2.40.50.100 41 75 4.9E-20 T 22-04-2016 APT61_RS12635 9bca37f40ff386b71bb8a102e62a3986 285 Pfam PF13533 Biotin-lipoyl like 41 90 7.6E-17 T 22-04-2016 APT61_RS12635 9bca37f40ff386b71bb8a102e62a3986 285 PANTHER PTHR30367 1 281 1.3E-145 T 22-04-2016 APT61_RS12635 9bca37f40ff386b71bb8a102e62a3986 285 Pfam PF13437 HlyD family secretion protein 151 230 1.0E-9 T 22-04-2016 APT61_RS10840 a289ebfc4c1696f322ebcaf839d7a3f2 310 SMART SM00062 62 295 6.3E-22 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS10840 a289ebfc4c1696f322ebcaf839d7a3f2 310 Gene3D G3DSA:3.40.190.10 141 251 3.0E-24 T 22-04-2016 APT61_RS10840 a289ebfc4c1696f322ebcaf839d7a3f2 310 Gene3D G3DSA:3.40.190.10 71 140 4.3E-23 T 22-04-2016 APT61_RS10840 a289ebfc4c1696f322ebcaf839d7a3f2 310 Gene3D G3DSA:3.40.190.10 255 292 4.3E-23 T 22-04-2016 APT61_RS10840 a289ebfc4c1696f322ebcaf839d7a3f2 310 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 72 292 1.5E-38 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS10840 a289ebfc4c1696f322ebcaf839d7a3f2 310 SUPERFAMILY SSF53850 52 292 5.66E-43 T 22-04-2016 APT61_RS10840 a289ebfc4c1696f322ebcaf839d7a3f2 310 SUPERFAMILY SSF53850 3 21 5.66E-43 T 22-04-2016 APT61_RS21510 fbeefa61b8fc628d498a363d69fcf969 637 Gene3D G3DSA:3.40.50.10370 378 476 7.3E-42 T 22-04-2016 IPR029503 Phosphotransferase system EIIB component, mannitol-specific GO:0009401|GO:0022872 APT61_RS21510 fbeefa61b8fc628d498a363d69fcf969 637 SUPERFAMILY SSF52794 379 468 6.28E-22 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS21510 fbeefa61b8fc628d498a363d69fcf969 637 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 8 347 2.7E-187 T 22-04-2016 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 APT61_RS21510 fbeefa61b8fc628d498a363d69fcf969 637 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 500 637 3.2E-32 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS21510 fbeefa61b8fc628d498a363d69fcf969 637 PANTHER PTHR30181 1 612 0.0 T 22-04-2016 APT61_RS21510 fbeefa61b8fc628d498a363d69fcf969 637 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 381 456 2.2E-9 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS21510 fbeefa61b8fc628d498a363d69fcf969 637 PANTHER PTHR30181:SF2 1 612 0.0 T 22-04-2016 APT61_RS21510 fbeefa61b8fc628d498a363d69fcf969 637 Pfam PF02378 Phosphotransferase system, EIIC 17 277 3.6E-19 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS21510 fbeefa61b8fc628d498a363d69fcf969 637 SUPERFAMILY SSF55804 498 637 3.53E-40 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APT61_RS21510 fbeefa61b8fc628d498a363d69fcf969 637 Gene3D G3DSA:3.40.930.10 499 636 2.2E-43 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS21510 fbeefa61b8fc628d498a363d69fcf969 637 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 541 557 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS16885 122a160b481ccb1dce4b99a38ca8eb03 414 Gene3D G3DSA:2.30.30.60 202 251 2.1E-10 T 22-04-2016 APT61_RS16885 122a160b481ccb1dce4b99a38ca8eb03 414 Pfam PF00924 Mechanosensitive ion channel 142 396 2.4E-62 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APT61_RS16885 122a160b481ccb1dce4b99a38ca8eb03 414 PANTHER PTHR30414:SF0 1 414 5.7E-210 T 22-04-2016 IPR030192 Miniconductance mechanosensitive channel YbdG GO:0008381|GO:0016021|GO:0071470 APT61_RS16885 122a160b481ccb1dce4b99a38ca8eb03 414 SUPERFAMILY SSF50182 186 252 1.6E-12 T 22-04-2016 IPR010920 LSM domain APT61_RS16885 122a160b481ccb1dce4b99a38ca8eb03 414 SUPERFAMILY SSF82689 321 396 4.84E-6 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APT61_RS16885 122a160b481ccb1dce4b99a38ca8eb03 414 PANTHER PTHR30414 1 414 5.7E-210 T 22-04-2016 APT61_RS08775 62a4b56fff2a8f63b5d1e449a7e9f389 572 PANTHER PTHR30627 2 572 2.9E-222 T 22-04-2016 APT61_RS08775 62a4b56fff2a8f63b5d1e449a7e9f389 572 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 547 5.1E-77 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APT61_RS08775 62a4b56fff2a8f63b5d1e449a7e9f389 572 Gene3D G3DSA:3.40.710.10 235 554 5.2E-83 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS08775 62a4b56fff2a8f63b5d1e449a7e9f389 572 Gene3D G3DSA:3.90.1310.10 135 234 3.8E-32 T 22-04-2016 APT61_RS08775 62a4b56fff2a8f63b5d1e449a7e9f389 572 PANTHER PTHR30627:SF1 2 572 2.9E-222 T 22-04-2016 APT61_RS08775 62a4b56fff2a8f63b5d1e449a7e9f389 572 SUPERFAMILY SSF56601 228 556 6.49E-86 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS08775 62a4b56fff2a8f63b5d1e449a7e9f389 572 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 214 7.9E-18 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APT61_RS08775 62a4b56fff2a8f63b5d1e449a7e9f389 572 SUPERFAMILY SSF56519 56 227 1.83E-45 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APT61_RS05170 cee8516a723407632fe92ea370ec81d6 462 SUPERFAMILY SSF51338 84 127 3.06E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS05170 cee8516a723407632fe92ea370ec81d6 462 SUPERFAMILY SSF51556 120 414 3.4E-72 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS05170 cee8516a723407632fe92ea370ec81d6 462 PANTHER PTHR32027:SF9 53 459 2.2E-224 T 22-04-2016 APT61_RS05170 cee8516a723407632fe92ea370ec81d6 462 Gene3D G3DSA:3.20.20.140 136 408 8.5E-94 T 22-04-2016 APT61_RS05170 cee8516a723407632fe92ea370ec81d6 462 Gene3D G3DSA:2.30.40.10 84 135 5.2E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS05170 cee8516a723407632fe92ea370ec81d6 462 Pfam PF07969 Amidohydrolase family 176 433 5.2E-9 T 22-04-2016 IPR013108 Amidohydrolase 3 APT61_RS05170 cee8516a723407632fe92ea370ec81d6 462 PANTHER PTHR32027 53 459 2.2E-224 T 22-04-2016 APT61_RS09475 941e2cab32e97b370f480142540658df 77 Gene3D G3DSA:3.30.110.40 6 77 1.2E-33 T 22-04-2016 IPR001455 TusA-like domain APT61_RS09475 941e2cab32e97b370f480142540658df 77 Pfam PF01206 Sulfurtransferase TusA 9 77 1.2E-19 T 22-04-2016 IPR001455 TusA-like domain APT61_RS09475 941e2cab32e97b370f480142540658df 77 SUPERFAMILY SSF64307 2 77 2.22E-24 T 22-04-2016 IPR001455 TusA-like domain APT61_RS09475 941e2cab32e97b370f480142540658df 77 PANTHER PTHR33279 1 77 8.9E-27 T 22-04-2016 APT61_RS09475 941e2cab32e97b370f480142540658df 77 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 22-04-2016 IPR001455 TusA-like domain APT61_RS11440 505501841bb0412c925ee97302628c01 304 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 276 1.9E-56 T 22-04-2016 IPR021134 Bestrophin/UPF0187 APT61_RS11440 505501841bb0412c925ee97302628c01 304 PANTHER PTHR33281 1 303 3.8E-180 T 22-04-2016 APT61_RS11440 505501841bb0412c925ee97302628c01 304 PANTHER PTHR33281:SF3 1 303 3.8E-180 T 22-04-2016 APT61_RS07770 e6dca0a16034a55e24da63e778e9547f 292 PANTHER PTHR22572 5 270 5.4E-195 T 22-04-2016 APT61_RS07770 e6dca0a16034a55e24da63e778e9547f 292 SUPERFAMILY SSF53448 4 289 1.94E-97 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS07770 e6dca0a16034a55e24da63e778e9547f 292 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 290 4.5E-164 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APT61_RS07770 e6dca0a16034a55e24da63e778e9547f 292 Gene3D G3DSA:3.90.550.10 4 268 7.8E-72 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS07770 e6dca0a16034a55e24da63e778e9547f 292 PANTHER PTHR22572:SF105 5 270 5.4E-195 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APT61_RS07770 e6dca0a16034a55e24da63e778e9547f 292 Pfam PF00483 Nucleotidyl transferase 5 241 9.5E-74 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APT61_RS04455 0a9d119050fb587bb1a062ba35d0c9ec 1124 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 808 1.5E-302 T 22-04-2016 APT61_RS04455 0a9d119050fb587bb1a062ba35d0c9ec 1124 PIRSF PIRSF000980 1 1124 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 APT61_RS04455 0a9d119050fb587bb1a062ba35d0c9ec 1124 Gene3D G3DSA:3.40.50.300 659 754 1.6E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04455 0a9d119050fb587bb1a062ba35d0c9ec 1124 Gene3D G3DSA:3.40.50.300 343 457 1.6E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04455 0a9d119050fb587bb1a062ba35d0c9ec 1124 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1124 13.648 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 APT61_RS04455 0a9d119050fb587bb1a062ba35d0c9ec 1124 PANTHER PTHR30591:SF1 1 1107 0.0 T 22-04-2016 APT61_RS04455 0a9d119050fb587bb1a062ba35d0c9ec 1124 Gene3D G3DSA:1.10.10.160 86 183 6.6E-33 T 22-04-2016 IPR013986 DExx box DNA helicase domain APT61_RS04455 0a9d119050fb587bb1a062ba35d0c9ec 1124 SUPERFAMILY SSF52980 822 1122 2.31E-97 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APT61_RS04455 0a9d119050fb587bb1a062ba35d0c9ec 1124 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1089 0.0 T 22-04-2016 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 APT61_RS04455 0a9d119050fb587bb1a062ba35d0c9ec 1124 PANTHER PTHR30591 1 1107 0.0 T 22-04-2016 APT61_RS04455 0a9d119050fb587bb1a062ba35d0c9ec 1124 SUPERFAMILY SSF52540 1 349 3.88E-127 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04455 0a9d119050fb587bb1a062ba35d0c9ec 1124 SUPERFAMILY SSF52540 366 812 6.59E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09425 ddc3eb2fa0890852880d00b09d3061ae 109 SUPERFAMILY SSF102816 3 109 1.7E-49 T 22-04-2016 IPR007376 dsDNA mimic, putative APT61_RS09425 ddc3eb2fa0890852880d00b09d3061ae 109 Gene3D G3DSA:3.10.450.140 9 109 4.7E-49 T 22-04-2016 IPR007376 dsDNA mimic, putative APT61_RS09425 ddc3eb2fa0890852880d00b09d3061ae 109 Pfam PF04269 Protein of unknown function, DUF440 8 109 9.2E-45 T 22-04-2016 IPR007376 dsDNA mimic, putative APT61_RS09425 ddc3eb2fa0890852880d00b09d3061ae 109 Hamap MF_00680 UPF0263 protein YciU [yciU]. 5 109 34.074 T 22-04-2016 IPR007376 dsDNA mimic, putative APT61_RS09425 ddc3eb2fa0890852880d00b09d3061ae 109 PIRSF PIRSF004916 1 109 1.1E-54 T 22-04-2016 IPR007376 dsDNA mimic, putative APT61_RS09425 ddc3eb2fa0890852880d00b09d3061ae 109 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 7 109 7.0E-51 T 22-04-2016 IPR007376 dsDNA mimic, putative APT61_RS20300 e5680f742c72b73ad3812749c1b6424d 429 SUPERFAMILY SSF103473 6 428 2.35E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS20300 e5680f742c72b73ad3812749c1b6424d 429 PANTHER PTHR23508 6 419 2.2E-118 T 22-04-2016 APT61_RS20300 e5680f742c72b73ad3812749c1b6424d 429 ProSitePatterns PS00216 Sugar transport proteins signature 1. 292 309 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS20300 e5680f742c72b73ad3812749c1b6424d 429 Pfam PF00083 Sugar (and other) transporter 19 228 2.9E-26 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APT61_RS20300 e5680f742c72b73ad3812749c1b6424d 429 ProSitePatterns PS00217 Sugar transport proteins signature 2. 126 151 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS20300 e5680f742c72b73ad3812749c1b6424d 429 Gene3D G3DSA:1.20.1250.20 12 221 1.9E-25 T 22-04-2016 APT61_RS20300 e5680f742c72b73ad3812749c1b6424d 429 Gene3D G3DSA:1.20.1250.20 242 428 1.7E-20 T 22-04-2016 APT61_RS20300 e5680f742c72b73ad3812749c1b6424d 429 Pfam PF07690 Major Facilitator Superfamily 250 421 2.2E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS20550 a40d9966c0a530c59ac38826d390e8a6 474 Gene3D G3DSA:3.20.20.80 79 214 9.1E-9 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS20550 a40d9966c0a530c59ac38826d390e8a6 474 Pfam PF02449 Beta-galactosidase 78 182 2.6E-4 T 22-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 APT61_RS20550 a40d9966c0a530c59ac38826d390e8a6 474 SUPERFAMILY SSF51445 78 258 3.8E-11 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS20550 a40d9966c0a530c59ac38826d390e8a6 474 Pfam PF16116 Domain of unknown function (DUF4832) 330 457 4.4E-17 T 22-04-2016 IPR032267 Domain of unknown function DUF4832 APT61_RS04900 b74a7c00fc71c63d485de0897c3490df 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 2.9E-62 T 22-04-2016 IPR010976 Beta-phosphoglucomutase hydrolase APT61_RS04900 b74a7c00fc71c63d485de0897c3490df 188 PANTHER PTHR18901:SF29 4 186 6.0E-67 T 22-04-2016 APT61_RS04900 b74a7c00fc71c63d485de0897c3490df 188 Gene3D G3DSA:3.40.50.1000 90 185 1.2E-34 T 22-04-2016 IPR023214 HAD-like domain APT61_RS04900 b74a7c00fc71c63d485de0897c3490df 188 Gene3D G3DSA:3.40.50.1000 3 19 1.2E-34 T 22-04-2016 IPR023214 HAD-like domain APT61_RS04900 b74a7c00fc71c63d485de0897c3490df 188 PANTHER PTHR18901 4 186 6.0E-67 T 22-04-2016 APT61_RS04900 b74a7c00fc71c63d485de0897c3490df 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 1.9E-27 T 22-04-2016 IPR023214 HAD-like domain APT61_RS04900 b74a7c00fc71c63d485de0897c3490df 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 122 183 3.5E-14 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS04900 b74a7c00fc71c63d485de0897c3490df 188 SUPERFAMILY SSF56784 5 185 6.14E-43 T 22-04-2016 IPR023214 HAD-like domain APT61_RS07460 7b99c95d104066c9ba0822eba1c6ac54 266 PANTHER PTHR20858:SF17 1 266 3.5E-118 T 22-04-2016 APT61_RS07460 7b99c95d104066c9ba0822eba1c6ac54 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 1.0E-105 T 22-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 APT61_RS07460 7b99c95d104066c9ba0822eba1c6ac54 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 1.1E-95 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 APT61_RS07460 7b99c95d104066c9ba0822eba1c6ac54 266 SUPERFAMILY SSF53613 5 265 2.96E-81 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS07460 7b99c95d104066c9ba0822eba1c6ac54 266 PANTHER PTHR20858 1 266 3.5E-118 T 22-04-2016 APT61_RS07460 7b99c95d104066c9ba0822eba1c6ac54 266 Gene3D G3DSA:3.40.1190.20 6 263 7.4E-101 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS11830 7c8dab040d1a42d9afaf74f11b1512c4 141 SUPERFAMILY SSF55729 8 135 4.05E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS11830 7c8dab040d1a42d9afaf74f11b1512c4 141 Gene3D G3DSA:3.40.630.30 8 140 1.9E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS11830 7c8dab040d1a42d9afaf74f11b1512c4 141 PANTHER PTHR10545 70 138 4.8E-14 T 22-04-2016 APT61_RS11830 7c8dab040d1a42d9afaf74f11b1512c4 141 Pfam PF00583 Acetyltransferase (GNAT) family 50 130 1.0E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS11020 67d62604759ddc66f88ca8fff88345b8 495 Gene3D G3DSA:1.20.1250.20 5 188 9.9E-23 T 22-04-2016 APT61_RS11020 67d62604759ddc66f88ca8fff88345b8 495 PANTHER PTHR23501:SF65 3 495 5.0E-204 T 22-04-2016 APT61_RS11020 67d62604759ddc66f88ca8fff88345b8 495 SUPERFAMILY SSF103473 465 488 4.32E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11020 67d62604759ddc66f88ca8fff88345b8 495 SUPERFAMILY SSF103473 3 189 4.32E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11020 67d62604759ddc66f88ca8fff88345b8 495 SUPERFAMILY SSF103473 242 413 4.32E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11020 67d62604759ddc66f88ca8fff88345b8 495 Gene3D G3DSA:1.20.1250.20 260 419 3.9E-14 T 22-04-2016 APT61_RS11020 67d62604759ddc66f88ca8fff88345b8 495 Gene3D G3DSA:1.20.1250.20 470 487 3.9E-14 T 22-04-2016 APT61_RS11020 67d62604759ddc66f88ca8fff88345b8 495 PANTHER PTHR23501 3 495 5.0E-204 T 22-04-2016 APT61_RS11020 67d62604759ddc66f88ca8fff88345b8 495 Pfam PF07690 Major Facilitator Superfamily 12 403 4.0E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS11020 67d62604759ddc66f88ca8fff88345b8 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 70 92 4.4E-7 T 22-04-2016 APT61_RS11020 67d62604759ddc66f88ca8fff88345b8 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 157 181 4.4E-7 T 22-04-2016 APT61_RS11020 67d62604759ddc66f88ca8fff88345b8 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 394 413 4.4E-7 T 22-04-2016 APT61_RS11020 67d62604759ddc66f88ca8fff88345b8 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 4.4E-7 T 22-04-2016 APT61_RS07040 be75ea8b35a3de0a693a3402a8c653ef 547 SUPERFAMILY SSF52540 316 533 1.78E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07040 be75ea8b35a3de0a693a3402a8c653ef 547 PANTHER PTHR24220 324 529 2.5E-132 T 22-04-2016 APT61_RS07040 be75ea8b35a3de0a693a3402a8c653ef 547 SUPERFAMILY SSF90123 5 299 4.19E-26 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS07040 be75ea8b35a3de0a693a3402a8c653ef 547 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS07040 be75ea8b35a3de0a693a3402a8c653ef 547 Pfam PF00005 ABC transporter 341 477 3.6E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS07040 be75ea8b35a3de0a693a3402a8c653ef 547 Gene3D G3DSA:3.40.50.300 322 531 1.3E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07040 be75ea8b35a3de0a693a3402a8c653ef 547 PANTHER PTHR24220:SF425 324 529 2.5E-132 T 22-04-2016 APT61_RS07040 be75ea8b35a3de0a693a3402a8c653ef 547 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 2 527 3.8E-113 T 22-04-2016 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 APT61_RS07040 be75ea8b35a3de0a693a3402a8c653ef 547 Gene3D G3DSA:1.20.1560.10 8 302 2.7E-19 T 22-04-2016 APT61_RS07040 be75ea8b35a3de0a693a3402a8c653ef 547 SMART SM00382 348 534 1.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS09890 3c3a0306d1399c7977c11bfa331c9fb7 350 PANTHER PTHR35564 1 341 2.3E-83 T 22-04-2016 APT61_RS09890 3c3a0306d1399c7977c11bfa331c9fb7 350 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 10 310 9.8E-68 T 22-04-2016 IPR010732 Type VI secretion, TssG-like APT61_RS09890 3c3a0306d1399c7977c11bfa331c9fb7 350 Pfam PF06996 Type VI secretion, VasB, ImpH, VC_A0111 10 310 1.4E-73 T 22-04-2016 IPR010732 Type VI secretion, TssG-like APT61_RS09890 3c3a0306d1399c7977c11bfa331c9fb7 350 PANTHER PTHR35564:SF3 1 341 2.3E-83 T 22-04-2016 APT61_RS06070 9e9c6348f2248b5fff5c64f705c39ee3 457 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 2.5E-32 T 22-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 APT61_RS06070 9e9c6348f2248b5fff5c64f705c39ee3 457 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.444 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APT61_RS06070 9e9c6348f2248b5fff5c64f705c39ee3 457 Pfam PF02601 Exonuclease VII, large subunit 126 440 8.6E-104 T 22-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 APT61_RS06070 9e9c6348f2248b5fff5c64f705c39ee3 457 PANTHER PTHR30008 2 455 4.2E-192 T 22-04-2016 APT61_RS06070 9e9c6348f2248b5fff5c64f705c39ee3 457 PANTHER PTHR30008:SF0 2 455 4.2E-192 T 22-04-2016 APT61_RS06070 9e9c6348f2248b5fff5c64f705c39ee3 457 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 355 6.1E-140 T 22-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 APT61_RS00195 6af0d3f685d379c586e3f459aecb8dd9 474 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 68 95 - T 22-04-2016 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 APT61_RS00195 6af0d3f685d379c586e3f459aecb8dd9 474 PANTHER PTHR11328 4 474 0.0 T 22-04-2016 APT61_RS00195 6af0d3f685d379c586e3f459aecb8dd9 474 Pfam PF13347 MFS/sugar transport protein 19 440 1.6E-85 T 22-04-2016 APT61_RS00195 6af0d3f685d379c586e3f459aecb8dd9 474 PANTHER PTHR11328:SF40 4 474 0.0 T 22-04-2016 APT61_RS00195 6af0d3f685d379c586e3f459aecb8dd9 474 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 17 452 3.0E-151 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 APT61_RS00195 6af0d3f685d379c586e3f459aecb8dd9 474 SUPERFAMILY SSF103473 20 442 3.01E-33 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS00195 6af0d3f685d379c586e3f459aecb8dd9 474 Gene3D G3DSA:1.20.1250.20 35 208 7.5E-6 T 22-04-2016 APT61_RS00195 6af0d3f685d379c586e3f459aecb8dd9 474 Gene3D G3DSA:1.20.1250.20 229 440 3.8E-17 T 22-04-2016 APT61_RS21350 098c4c85920f7dc38fb67a174c0c3d43 426 PIRSF PIRSF002808 2 421 2.8E-34 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APT61_RS21350 098c4c85920f7dc38fb67a174c0c3d43 426 Pfam PF07690 Major Facilitator Superfamily 269 416 2.6E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS21350 098c4c85920f7dc38fb67a174c0c3d43 426 Pfam PF07690 Major Facilitator Superfamily 18 257 2.0E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS21350 098c4c85920f7dc38fb67a174c0c3d43 426 SUPERFAMILY SSF103473 8 413 1.02E-85 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS21350 098c4c85920f7dc38fb67a174c0c3d43 426 PANTHER PTHR11662 9 417 2.3E-116 T 22-04-2016 APT61_RS21350 098c4c85920f7dc38fb67a174c0c3d43 426 PANTHER PTHR11662:SF3 9 417 2.3E-116 T 22-04-2016 APT61_RS21350 098c4c85920f7dc38fb67a174c0c3d43 426 Gene3D G3DSA:1.20.1250.20 11 204 2.0E-44 T 22-04-2016 APT61_RS21350 098c4c85920f7dc38fb67a174c0c3d43 426 Gene3D G3DSA:1.20.1250.20 226 411 4.2E-30 T 22-04-2016 APT61_RS21115 2f3811de953621ae35385b8140e2afcb 230 Pfam PF07356 Protein of unknown function (DUF1481) 42 226 2.2E-67 T 22-04-2016 IPR010858 Protein of unknown function DUF1481 APT61_RS21115 2f3811de953621ae35385b8140e2afcb 230 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 6 33 9.4E-6 T 22-04-2016 IPR012640 Membrane lipoprotein, lipid attachment site APT61_RS21115 2f3811de953621ae35385b8140e2afcb 230 PIRSF PIRSF006993 1 230 4.1E-108 T 22-04-2016 IPR016500 Uncharacterised conserved protein UCP006993 APT61_RS14055 fce0638f7464f9f9ef664e0e9c680a22 365 PANTHER PTHR30381 1 365 2.0E-227 T 22-04-2016 APT61_RS14055 fce0638f7464f9f9ef664e0e9c680a22 365 Pfam PF02119 Flagellar P-ring protein 21 364 4.4E-136 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APT61_RS14055 fce0638f7464f9f9ef664e0e9c680a22 365 PRINTS PR01010 Flagellar P-ring protein signature 104 121 1.7E-92 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APT61_RS14055 fce0638f7464f9f9ef664e0e9c680a22 365 PRINTS PR01010 Flagellar P-ring protein signature 161 179 1.7E-92 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APT61_RS14055 fce0638f7464f9f9ef664e0e9c680a22 365 PRINTS PR01010 Flagellar P-ring protein signature 56 71 1.7E-92 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APT61_RS14055 fce0638f7464f9f9ef664e0e9c680a22 365 PRINTS PR01010 Flagellar P-ring protein signature 36 51 1.7E-92 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APT61_RS14055 fce0638f7464f9f9ef664e0e9c680a22 365 PRINTS PR01010 Flagellar P-ring protein signature 82 101 1.7E-92 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APT61_RS14055 fce0638f7464f9f9ef664e0e9c680a22 365 PRINTS PR01010 Flagellar P-ring protein signature 121 139 1.7E-92 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APT61_RS14055 fce0638f7464f9f9ef664e0e9c680a22 365 PRINTS PR01010 Flagellar P-ring protein signature 251 263 1.7E-92 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APT61_RS14055 fce0638f7464f9f9ef664e0e9c680a22 365 PRINTS PR01010 Flagellar P-ring protein signature 187 205 1.7E-92 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APT61_RS14055 fce0638f7464f9f9ef664e0e9c680a22 365 PRINTS PR01010 Flagellar P-ring protein signature 21 36 1.7E-92 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APT61_RS14055 fce0638f7464f9f9ef664e0e9c680a22 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 365 38.91 T 22-04-2016 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 APT61_RS14055 fce0638f7464f9f9ef664e0e9c680a22 365 PANTHER PTHR30381:SF1 1 365 2.0E-227 T 22-04-2016 APT61_RS09605 2596795ecad4d7d25cf17292a4380016 251 Pfam PF00455 DeoR C terminal sensor domain 69 227 5.3E-43 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APT61_RS09605 2596795ecad4d7d25cf17292a4380016 251 SUPERFAMILY SSF46785 1 59 8.67E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS09605 2596795ecad4d7d25cf17292a4380016 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APT61_RS09605 2596795ecad4d7d25cf17292a4380016 251 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 9.1E-13 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS09605 2596795ecad4d7d25cf17292a4380016 251 SMART SM00420 4 56 6.2E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS09605 2596795ecad4d7d25cf17292a4380016 251 PANTHER PTHR30363 1 247 4.7E-143 T 22-04-2016 APT61_RS09605 2596795ecad4d7d25cf17292a4380016 251 Gene3D G3DSA:1.10.10.10 2 53 2.7E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS09605 2596795ecad4d7d25cf17292a4380016 251 PANTHER PTHR30363:SF16 1 247 4.7E-143 T 22-04-2016 APT61_RS09605 2596795ecad4d7d25cf17292a4380016 251 SUPERFAMILY SSF100950 67 228 2.01E-26 T 22-04-2016 APT61_RS09605 2596795ecad4d7d25cf17292a4380016 251 Gene3D G3DSA:3.40.50.1360 69 207 5.3E-10 T 22-04-2016 APT61_RS09605 2596795ecad4d7d25cf17292a4380016 251 SMART SM01134 67 228 6.0E-53 T 22-04-2016 APT61_RS09505 628a2f3eee8989c1d70ee8a31513f55a 520 Pfam PF00425 chorismate binding enzyme 243 502 1.2E-83 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal APT61_RS09505 628a2f3eee8989c1d70ee8a31513f55a 520 PANTHER PTHR11236:SF22 1 513 4.3E-264 T 22-04-2016 APT61_RS09505 628a2f3eee8989c1d70ee8a31513f55a 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 7.3E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APT61_RS09505 628a2f3eee8989c1d70ee8a31513f55a 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 7.3E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APT61_RS09505 628a2f3eee8989c1d70ee8a31513f55a 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 7.3E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APT61_RS09505 628a2f3eee8989c1d70ee8a31513f55a 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 7.3E-24 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APT61_RS09505 628a2f3eee8989c1d70ee8a31513f55a 520 Gene3D G3DSA:3.60.120.10 7 516 4.7E-157 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APT61_RS09505 628a2f3eee8989c1d70ee8a31513f55a 520 SUPERFAMILY SSF56322 9 515 1.15E-160 T 22-04-2016 IPR005801 ADC synthase GO:0009058 APT61_RS09505 628a2f3eee8989c1d70ee8a31513f55a 520 PANTHER PTHR11236 1 513 4.3E-264 T 22-04-2016 APT61_RS09505 628a2f3eee8989c1d70ee8a31513f55a 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 8.7E-256 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APT61_RS09505 628a2f3eee8989c1d70ee8a31513f55a 520 PIRSF PIRSF001373 1 520 2.2E-247 T 22-04-2016 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APT61_RS09505 628a2f3eee8989c1d70ee8a31513f55a 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 20 190 2.5E-11 T 22-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APT61_RS02840 1f8d15fa73103bcb2777eacddab7bf64 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.2E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 APT61_RS02840 1f8d15fa73103bcb2777eacddab7bf64 294 SUPERFAMILY SSF48452 27 283 3.08E-77 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS02840 1f8d15fa73103bcb2777eacddab7bf64 294 PANTHER PTHR23083 58 290 9.1E-27 T 22-04-2016 APT61_RS02840 1f8d15fa73103bcb2777eacddab7bf64 294 PANTHER PTHR23083 31 38 9.1E-27 T 22-04-2016 APT61_RS02840 1f8d15fa73103bcb2777eacddab7bf64 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.022 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS02840 1f8d15fa73103bcb2777eacddab7bf64 294 PIRSF PIRSF004654 1 292 1.6E-119 T 22-04-2016 IPR023605 Lipoprotein NlpI APT61_RS02840 1f8d15fa73103bcb2777eacddab7bf64 294 Gene3D G3DSA:1.25.40.10 49 267 3.0E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS02840 1f8d15fa73103bcb2777eacddab7bf64 294 SMART SM00028 62 95 0.0033 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS02840 1f8d15fa73103bcb2777eacddab7bf64 294 SMART SM00028 234 267 21.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS02840 1f8d15fa73103bcb2777eacddab7bf64 294 SMART SM00028 96 129 2.0E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 400 409 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 Gene3D G3DSA:3.30.450.40 7 170 7.1E-17 T 22-04-2016 IPR029016 GAF domain-like APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 SMART SM00382 207 350 3.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 Gene3D G3DSA:1.10.10.60 412 502 2.5E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 SUPERFAMILY SSF55781 22 169 2.84E-18 T 22-04-2016 IPR029016 GAF domain-like APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 273 288 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 SMART SM00065 20 167 5.1E-18 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 Hamap MF_01314 Anaerobic nitric oxide reductase transcription regulator NorR [norR]. 1 503 62.032 T 22-04-2016 IPR023944 Anaerobic nitric oxide reductase transcription regulator GO:0003700|GO:0006355 UniPathway: UPA00638 APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 Gene3D G3DSA:3.40.50.300 184 359 2.4E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 Pfam PF01590 GAF domain 23 154 4.7E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 SUPERFAMILY SSF52540 186 421 1.63E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 SUPERFAMILY SSF46689 448 502 5.38E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 PANTHER PTHR32071 186 502 2.2E-205 T 22-04-2016 APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 PANTHER PTHR32071:SF35 186 502 2.2E-205 T 22-04-2016 APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 Gene3D G3DSA:1.10.8.60 360 411 3.1E-20 T 22-04-2016 APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 211 224 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT61_RS04830 9505041f9baf24e122cebba6b12cc455 504 Pfam PF00158 Sigma-54 interaction domain 187 353 9.6E-67 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 SUPERFAMILY SSF82714 182 271 2.88E-21 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 PANTHER PTHR32063 1 1036 0.0 T 22-04-2016 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 PANTHER PTHR32063:SF25 1 1036 0.0 T 22-04-2016 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 SUPERFAMILY SSF82866 839 1028 1.31E-44 T 22-04-2016 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 SUPERFAMILY SSF82866 296 497 2.75E-47 T 22-04-2016 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1035 0.0 T 22-04-2016 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 SUPERFAMILY SSF82693 672 722 2.17E-25 T 22-04-2016 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 SUPERFAMILY SSF82693 809 857 2.17E-25 T 22-04-2016 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 Gene3D G3DSA:1.10.3850.10 280 498 1.4E-57 T 22-04-2016 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 Gene3D G3DSA:1.10.3850.10 815 1029 6.1E-57 T 22-04-2016 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 Gene3D G3DSA:3.30.2090.10 181 274 1.1E-24 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1028 0.0 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 Gene3D G3DSA:3.30.70.1430 567 669 3.1E-40 T 22-04-2016 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 SUPERFAMILY SSF82693 565 669 1.05E-32 T 22-04-2016 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 SUPERFAMILY SSF82693 38 132 6.28E-28 T 22-04-2016 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 Gene3D G3DSA:3.30.2090.10 722 809 1.9E-28 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 SUPERFAMILY SSF82693 274 330 1.01E-25 T 22-04-2016 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 SUPERFAMILY SSF82714 723 809 7.59E-23 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 Gene3D G3DSA:3.30.70.1430 38 139 3.0E-36 T 22-04-2016 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 SUPERFAMILY SSF82693 136 182 1.01E-25 T 22-04-2016 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 8.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 8.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 8.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 8.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 8.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 8.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 8.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 8.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS02320 e9ca6e2c74632cf851bfaf04e5095f18 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 8.3E-115 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 APT61_RS14440 11c1126d9f7c72d23437e80019d0a83e 190 SUPERFAMILY SSF49899 5 179 7.24E-33 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APT61_RS14440 11c1126d9f7c72d23437e80019d0a83e 190 Pfam PF07081 Protein of unknown function (DUF1349) 7 180 1.0E-65 T 22-04-2016 IPR009784 Protein of unknown function DUF1349 APT61_RS14440 11c1126d9f7c72d23437e80019d0a83e 190 Gene3D G3DSA:2.60.120.200 5 175 9.0E-23 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APT61_RS14440 11c1126d9f7c72d23437e80019d0a83e 190 PANTHER PTHR35332 1 189 2.3E-53 T 22-04-2016 APT61_RS14440 11c1126d9f7c72d23437e80019d0a83e 190 PIRSF PIRSF022704 1 190 1.0E-67 T 22-04-2016 IPR015987 Uncharacterised conserved protein UCP022704 APT61_RS14440 11c1126d9f7c72d23437e80019d0a83e 190 PANTHER PTHR35332:SF2 1 189 2.3E-53 T 22-04-2016 APT61_RS08895 15f15eaf0463be4656628307273c54b3 147 PANTHER PTHR37421 1 147 1.8E-80 T 22-04-2016 APT61_RS08895 15f15eaf0463be4656628307273c54b3 147 Pfam PF03692 Putative zinc- or iron-chelating domain 24 92 4.3E-8 T 22-04-2016 IPR005358 Putative zinc- or iron-chelating domain containing protein APT61_RS08895 15f15eaf0463be4656628307273c54b3 147 PIRSF PIRSF006173 1 145 6.9E-68 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 APT61_RS08895 15f15eaf0463be4656628307273c54b3 147 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 2 145 42.3 T 22-04-2016 IPR008228 Uncharacterised conserved protein UCP006173 APT61_RS08895 15f15eaf0463be4656628307273c54b3 147 PANTHER PTHR37421:SF1 1 147 1.8E-80 T 22-04-2016 APT61_RS17305 d0649e78baf745df41f16cf93b06735d 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APT61_RS17305 d0649e78baf745df41f16cf93b06735d 90 SMART SM00411 1 90 1.1E-41 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS17305 d0649e78baf745df41f16cf93b06735d 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.7E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS17305 d0649e78baf745df41f16cf93b06735d 90 SUPERFAMILY SSF47729 1 90 2.5E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APT61_RS17305 d0649e78baf745df41f16cf93b06735d 90 Gene3D G3DSA:4.10.520.10 1 90 9.9E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APT61_RS17305 d0649e78baf745df41f16cf93b06735d 90 PANTHER PTHR33175 1 90 4.6E-44 T 22-04-2016 APT61_RS17305 d0649e78baf745df41f16cf93b06735d 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.4E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS17305 d0649e78baf745df41f16cf93b06735d 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.4E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS17305 d0649e78baf745df41f16cf93b06735d 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.4E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS20205 ce91c4fca06c3474a117f2892592334b 313 Pfam PF00892 EamA-like transporter family 20 159 4.7E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS20205 ce91c4fca06c3474a117f2892592334b 313 Pfam PF00892 EamA-like transporter family 172 305 1.0E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS20205 ce91c4fca06c3474a117f2892592334b 313 PANTHER PTHR32322 5 313 2.7E-83 T 22-04-2016 APT61_RS20205 ce91c4fca06c3474a117f2892592334b 313 SUPERFAMILY SSF103481 205 309 7.19E-9 T 22-04-2016 APT61_RS20205 ce91c4fca06c3474a117f2892592334b 313 PANTHER PTHR32322:SF9 5 313 2.7E-83 T 22-04-2016 APT61_RS20205 ce91c4fca06c3474a117f2892592334b 313 SUPERFAMILY SSF103481 57 162 2.48E-15 T 22-04-2016 APT61_RS05800 1bb01639ed23dee34fcd863056b46a37 301 PANTHER PTHR11649 3 301 2.7E-124 T 22-04-2016 APT61_RS05800 1bb01639ed23dee34fcd863056b46a37 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 171 3.3E-40 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APT61_RS05800 1bb01639ed23dee34fcd863056b46a37 301 Gene3D G3DSA:3.30.300.20 194 294 7.8E-41 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APT61_RS05800 1bb01639ed23dee34fcd863056b46a37 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 1.5E-118 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APT61_RS05800 1bb01639ed23dee34fcd863056b46a37 301 SUPERFAMILY SSF54814 182 297 7.85E-41 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APT61_RS05800 1bb01639ed23dee34fcd863056b46a37 301 Pfam PF07650 KH domain 209 285 1.5E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APT61_RS05800 1bb01639ed23dee34fcd863056b46a37 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 1.5E-23 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS05800 1bb01639ed23dee34fcd863056b46a37 301 PANTHER PTHR11649:SF3 3 301 2.7E-124 T 22-04-2016 APT61_RS05800 1bb01639ed23dee34fcd863056b46a37 301 SUPERFAMILY SSF52540 11 205 2.72E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05800 1bb01639ed23dee34fcd863056b46a37 301 Gene3D G3DSA:3.40.50.300 4 193 6.3E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05800 1bb01639ed23dee34fcd863056b46a37 301 Hamap MF_00367 GTPase Era [era]. 6 297 35.293 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 APT61_RS08280 ecb8c0bf4e1e1286a033a6e40a5fffc9 238 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS08280 ecb8c0bf4e1e1286a033a6e40a5fffc9 238 SMART SM00382 30 216 3.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS08280 ecb8c0bf4e1e1286a033a6e40a5fffc9 238 Gene3D G3DSA:3.40.50.300 2 232 3.2E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08280 ecb8c0bf4e1e1286a033a6e40a5fffc9 238 Pfam PF00005 ABC transporter 21 165 6.8E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS08280 ecb8c0bf4e1e1286a033a6e40a5fffc9 238 SUPERFAMILY SSF52540 4 235 1.38E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08280 ecb8c0bf4e1e1286a033a6e40a5fffc9 238 PANTHER PTHR24220:SF515 7 236 7.3E-144 T 22-04-2016 APT61_RS08280 ecb8c0bf4e1e1286a033a6e40a5fffc9 238 PANTHER PTHR24220 7 236 7.3E-144 T 22-04-2016 APT61_RS15680 917d372225edad0a7f8770e2259034a7 304 Pfam PF05971 Protein of unknown function (DUF890) 5 297 6.4E-141 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 APT61_RS15680 917d372225edad0a7f8770e2259034a7 304 Gene3D G3DSA:3.40.50.150 97 238 2.2E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS15680 917d372225edad0a7f8770e2259034a7 304 PANTHER PTHR13393 4 304 7.9E-134 T 22-04-2016 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 APT61_RS15680 917d372225edad0a7f8770e2259034a7 304 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 5 299 53.831 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 APT61_RS15680 917d372225edad0a7f8770e2259034a7 304 SUPERFAMILY SSF53335 44 296 5.73E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS15680 917d372225edad0a7f8770e2259034a7 304 PANTHER PTHR13393:SF0 4 304 7.9E-134 T 22-04-2016 APT61_RS15680 917d372225edad0a7f8770e2259034a7 304 PIRSF PIRSF029038 1 304 2.7E-145 T 22-04-2016 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 APT61_RS04405 99b444cad777b43a5e369a11b34df8ea 72 SUPERFAMILY SSF50182 21 71 7.09E-19 T 22-04-2016 IPR010920 LSM domain APT61_RS04405 99b444cad777b43a5e369a11b34df8ea 72 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 3.1E-24 T 22-04-2016 IPR010305 Protein of unknown function DUF903 APT61_RS04405 99b444cad777b43a5e369a11b34df8ea 72 PANTHER PTHR37011:SF1 1 72 1.9E-38 T 22-04-2016 APT61_RS04405 99b444cad777b43a5e369a11b34df8ea 72 PANTHER PTHR37011 1 72 1.9E-38 T 22-04-2016 APT61_RS04405 99b444cad777b43a5e369a11b34df8ea 72 Gene3D G3DSA:2.30.30.100 19 72 4.0E-31 T 22-04-2016 APT61_RS04195 fb8e06cff4ad442f63a74abec1d3499f 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 298 5.4E-119 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 APT61_RS04195 fb8e06cff4ad442f63a74abec1d3499f 298 Pfam PF00589 Phage integrase family 113 284 1.2E-56 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS04195 fb8e06cff4ad442f63a74abec1d3499f 298 SUPERFAMILY SSF56349 106 296 1.06E-59 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APT61_RS04195 fb8e06cff4ad442f63a74abec1d3499f 298 Gene3D G3DSA:1.10.443.10 113 289 5.4E-60 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS04195 fb8e06cff4ad442f63a74abec1d3499f 298 SUPERFAMILY SSF47823 4 100 7.65E-35 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal APT61_RS04195 fb8e06cff4ad442f63a74abec1d3499f 298 Gene3D G3DSA:1.10.150.130 7 98 9.1E-29 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APT61_RS04195 fb8e06cff4ad442f63a74abec1d3499f 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 4 298 31.524 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD APT61_RS04195 fb8e06cff4ad442f63a74abec1d3499f 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 7.2E-23 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APT61_RS04195 fb8e06cff4ad442f63a74abec1d3499f 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 298 65.363 T 22-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 APT61_RS04195 fb8e06cff4ad442f63a74abec1d3499f 298 PANTHER PTHR30349 7 298 6.1E-125 T 22-04-2016 APT61_RS04195 fb8e06cff4ad442f63a74abec1d3499f 298 PANTHER PTHR30349:SF5 7 298 6.1E-125 T 22-04-2016 APT61_RS20600 2a93e3cb1e70362b064d2a5fc8628eb0 185 PANTHER PTHR33619 31 177 2.0E-34 T 22-04-2016 APT61_RS20600 2a93e3cb1e70362b064d2a5fc8628eb0 185 Pfam PF02563 Polysaccharide biosynthesis/export protein 34 107 1.7E-19 T 22-04-2016 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 APT61_RS20600 2a93e3cb1e70362b064d2a5fc8628eb0 185 Gene3D G3DSA:3.30.1950.10 41 111 2.1E-19 T 22-04-2016 APT61_RS20600 2a93e3cb1e70362b064d2a5fc8628eb0 185 Pfam PF10531 SLBB domain 113 156 9.9E-10 T 22-04-2016 IPR019554 Soluble ligand binding domain APT61_RS20600 2a93e3cb1e70362b064d2a5fc8628eb0 185 Gene3D G3DSA:3.10.560.10 112 159 9.5E-8 T 22-04-2016 APT61_RS15645 beaf155588d3e000375ecd5b8a536749 172 SUPERFAMILY SSF56925 27 172 1.52E-31 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS15645 beaf155588d3e000375ecd5b8a536749 172 Pfam PF13505 Outer membrane protein beta-barrel domain 9 172 6.2E-23 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel APT61_RS15645 beaf155588d3e000375ecd5b8a536749 172 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 46 54 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS15645 beaf155588d3e000375ecd5b8a536749 172 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 160 171 1.4E-39 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS15645 beaf155588d3e000375ecd5b8a536749 172 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 45 57 1.4E-39 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS15645 beaf155588d3e000375ecd5b8a536749 172 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 133 154 1.4E-39 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS15645 beaf155588d3e000375ecd5b8a536749 172 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 84 107 1.4E-39 T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS15645 beaf155588d3e000375ecd5b8a536749 172 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 164 172 - T 22-04-2016 IPR000758 Virulence-related outer membrane protein GO:0009279 APT61_RS15645 beaf155588d3e000375ecd5b8a536749 172 Gene3D G3DSA:2.40.160.20 26 172 1.1E-45 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS11425 64170b1173ec614f6821e13edfc57a57 433 SMART SM00387 325 433 5.2E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS11425 64170b1173ec614f6821e13edfc57a57 433 Pfam PF00672 HAMP domain 154 221 7.9E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS11425 64170b1173ec614f6821e13edfc57a57 433 SMART SM00388 226 284 2.4E-4 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS11425 64170b1173ec614f6821e13edfc57a57 433 Gene3D G3DSA:1.10.287.130 216 270 9.4E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS11425 64170b1173ec614f6821e13edfc57a57 433 SUPERFAMILY SSF47384 210 281 1.73E-10 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS11425 64170b1173ec614f6821e13edfc57a57 433 SUPERFAMILY SSF55874 281 432 2.49E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS11425 64170b1173ec614f6821e13edfc57a57 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 387 9.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS11425 64170b1173ec614f6821e13edfc57a57 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 359 373 9.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS11425 64170b1173ec614f6821e13edfc57a57 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 412 9.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS11425 64170b1173ec614f6821e13edfc57a57 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 431 9.6E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS11425 64170b1173ec614f6821e13edfc57a57 433 SMART SM00304 172 225 0.0021 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS11425 64170b1173ec614f6821e13edfc57a57 433 Gene3D G3DSA:3.30.565.10 271 432 4.3E-37 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS11425 64170b1173ec614f6821e13edfc57a57 433 PANTHER PTHR24423 166 432 1.5E-52 T 22-04-2016 APT61_RS11425 64170b1173ec614f6821e13edfc57a57 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 431 7.5E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 609 693 2.3E-8 T 22-04-2016 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 256 276 2.8E-61 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 293 307 2.8E-61 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 371 393 2.8E-61 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 477 493 2.8E-61 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 205 220 2.8E-61 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 321 336 2.8E-61 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 429 444 2.8E-61 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 PRINTS PR00743 Glycosyl hydrolase family 36 signature 502 518 2.8E-61 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 24 235 8.4E-45 T 22-04-2016 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 Gene3D G3DSA:3.20.20.70 289 573 1.0E-45 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 ProSitePatterns PS00512 Alpha-galactosidase signature. 322 337 - T 22-04-2016 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 SUPERFAMILY SSF51445 288 620 5.12E-108 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 PIRSF PIRSF005536 1 707 1.6E-239 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 PANTHER PTHR22762:SF81 277 523 1.1E-64 T 22-04-2016 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 Pfam PF02065 Melibiase 255 592 1.2E-117 T 22-04-2016 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 APT61_RS00385 64ec4f036d30201d461bcccbfa932a30 707 PANTHER PTHR22762 277 523 1.1E-64 T 22-04-2016 APT61_RS06160 eadf3913768ff5751dadc908f136705d 225 PANTHER PTHR30050 1 224 4.2E-117 T 22-04-2016 APT61_RS06160 eadf3913768ff5751dadc908f136705d 225 SUPERFAMILY SSF52540 10 203 1.61E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS06160 eadf3913768ff5751dadc908f136705d 225 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 1 224 1.8E-81 T 22-04-2016 IPR017788 DnaA regulatory inactivator Hda GO:0032297 APT61_RS06160 eadf3913768ff5751dadc908f136705d 225 Pfam PF00308 Bacterial dnaA protein 8 204 2.9E-17 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA APT61_RS06160 eadf3913768ff5751dadc908f136705d 225 Gene3D G3DSA:1.10.8.60 159 224 2.0E-30 T 22-04-2016 APT61_RS06160 eadf3913768ff5751dadc908f136705d 225 PANTHER PTHR30050:SF5 1 224 4.2E-117 T 22-04-2016 APT61_RS06160 eadf3913768ff5751dadc908f136705d 225 Gene3D G3DSA:3.40.50.300 2 156 2.2E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS06160 eadf3913768ff5751dadc908f136705d 225 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 35 55 1.4E-7 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APT61_RS06160 eadf3913768ff5751dadc908f136705d 225 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 123 150 1.4E-7 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like APT61_RS06160 eadf3913768ff5751dadc908f136705d 225 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 1 225 55.456 T 22-04-2016 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae APT61_RS05205 6c8b913fbd71aca62d2330d57a6b7fe8 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS05205 6c8b913fbd71aca62d2330d57a6b7fe8 305 Gene3D G3DSA:1.10.10.10 3 82 7.4E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05205 6c8b913fbd71aca62d2330d57a6b7fe8 305 Gene3D G3DSA:3.40.190.10 174 258 1.3E-26 T 22-04-2016 APT61_RS05205 6c8b913fbd71aca62d2330d57a6b7fe8 305 Gene3D G3DSA:3.40.190.10 83 173 3.2E-12 T 22-04-2016 APT61_RS05205 6c8b913fbd71aca62d2330d57a6b7fe8 305 Pfam PF03466 LysR substrate binding domain 89 292 1.0E-46 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS05205 6c8b913fbd71aca62d2330d57a6b7fe8 305 PANTHER PTHR30537:SF5 1 293 2.1E-105 T 22-04-2016 APT61_RS05205 6c8b913fbd71aca62d2330d57a6b7fe8 305 SUPERFAMILY SSF46785 4 86 1.9E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05205 6c8b913fbd71aca62d2330d57a6b7fe8 305 PANTHER PTHR30537 1 293 2.1E-105 T 22-04-2016 APT61_RS05205 6c8b913fbd71aca62d2330d57a6b7fe8 305 SUPERFAMILY SSF53850 90 296 4.52E-49 T 22-04-2016 APT61_RS20830 3c767f8fe0d26be231885bd499386cf8 449 PANTHER PTHR11119:SF42 13 444 1.8E-300 T 22-04-2016 APT61_RS20830 3c767f8fe0d26be231885bd499386cf8 449 PANTHER PTHR11119 13 444 1.8E-300 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS20830 3c767f8fe0d26be231885bd499386cf8 449 Pfam PF00860 Permease family 26 409 8.0E-89 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS11635 47372e54e47596e57b5d29b8a8302cf4 423 Gene3D G3DSA:3.40.50.2300 146 345 2.3E-74 T 22-04-2016 APT61_RS11635 47372e54e47596e57b5d29b8a8302cf4 423 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 290 303 1.1E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS11635 47372e54e47596e57b5d29b8a8302cf4 423 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 31 47 1.1E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS11635 47372e54e47596e57b5d29b8a8302cf4 423 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 53 69 1.1E-5 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS11635 47372e54e47596e57b5d29b8a8302cf4 423 PANTHER PTHR30483 1 420 3.9E-227 T 22-04-2016 APT61_RS11635 47372e54e47596e57b5d29b8a8302cf4 423 Pfam PF13433 Periplasmic binding protein domain 31 406 1.0E-173 T 22-04-2016 APT61_RS11635 47372e54e47596e57b5d29b8a8302cf4 423 SUPERFAMILY SSF53822 30 408 2.04E-95 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS11635 47372e54e47596e57b5d29b8a8302cf4 423 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 2.0E-179 T 22-04-2016 IPR017777 ABC transporter, urea, substrate-binding, UrtA APT61_RS11635 47372e54e47596e57b5d29b8a8302cf4 423 PANTHER PTHR30483:SF8 1 420 3.9E-227 T 22-04-2016 APT61_RS15845 60c22bb46936ba6afb1d1039c11c31c6 251 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 12 249 3.8E-61 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 APT61_RS15845 60c22bb46936ba6afb1d1039c11c31c6 251 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 4 250 27.712 T 22-04-2016 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519|UniPathway: UPA00078 APT61_RS15845 60c22bb46936ba6afb1d1039c11c31c6 251 PANTHER PTHR10108 12 175 5.7E-39 T 22-04-2016 APT61_RS15845 60c22bb46936ba6afb1d1039c11c31c6 251 Pfam PF08241 Methyltransferase domain 47 138 1.2E-22 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APT61_RS15845 60c22bb46936ba6afb1d1039c11c31c6 251 PANTHER PTHR10108:SF855 12 175 5.7E-39 T 22-04-2016 APT61_RS15845 60c22bb46936ba6afb1d1039c11c31c6 251 SUPERFAMILY SSF53335 10 182 8.36E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS15845 60c22bb46936ba6afb1d1039c11c31c6 251 Gene3D G3DSA:3.40.50.150 10 203 6.1E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS21175 d764408dde948a71ad3532a3064bf89d 377 SMART SM00876 258 361 9.1E-30 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APT61_RS21175 d764408dde948a71ad3532a3064bf89d 377 SUPERFAMILY SSF102114 37 363 3.53E-52 T 22-04-2016 APT61_RS21175 d764408dde948a71ad3532a3064bf89d 377 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 368 1.5E-160 T 22-04-2016 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892|UniPathway: UPA00060 APT61_RS21175 d764408dde948a71ad3532a3064bf89d 377 Gene3D G3DSA:3.20.20.70 36 322 1.2E-46 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS21175 d764408dde948a71ad3532a3064bf89d 377 PANTHER PTHR22976 1 375 3.5E-229 T 22-04-2016 APT61_RS21175 d764408dde948a71ad3532a3064bf89d 377 PANTHER PTHR22976:SF17 1 375 3.5E-229 T 22-04-2016 APT61_RS21175 d764408dde948a71ad3532a3064bf89d 377 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 258 360 4.3E-22 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APT61_RS21175 d764408dde948a71ad3532a3064bf89d 377 Pfam PF04055 Radical SAM superfamily 82 221 9.6E-8 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS20115 00fdfd60cfcb59669963209546911208 246 SUPERFAMILY SSF56655 1 242 1.18E-74 T 22-04-2016 APT61_RS20115 00fdfd60cfcb59669963209546911208 246 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 22-04-2016 IPR020583 Inositol monophosphatase, metal-binding site APT61_RS20115 00fdfd60cfcb59669963209546911208 246 Gene3D G3DSA:3.40.190.80 148 243 2.7E-41 T 22-04-2016 APT61_RS20115 00fdfd60cfcb59669963209546911208 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 2.4E-109 T 22-04-2016 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 APT61_RS20115 00fdfd60cfcb59669963209546911208 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 22-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 APT61_RS20115 00fdfd60cfcb59669963209546911208 246 PANTHER PTHR20854:SF5 1 243 6.9E-87 T 22-04-2016 APT61_RS20115 00fdfd60cfcb59669963209546911208 246 Gene3D G3DSA:3.30.540.10 2 147 1.8E-44 T 22-04-2016 APT61_RS20115 00fdfd60cfcb59669963209546911208 246 PANTHER PTHR20854 1 243 6.9E-87 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS20115 00fdfd60cfcb59669963209546911208 246 Pfam PF00459 Inositol monophosphatase family 6 233 4.8E-50 T 22-04-2016 IPR000760 Inositol monophosphatase GO:0046854 APT61_RS08475 6d0f569366de98ffda2757bc60193f6d 129 SUPERFAMILY SSF52172 5 125 7.83E-35 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS08475 6d0f569366de98ffda2757bc60193f6d 129 Pfam PF00072 Response regulator receiver domain 9 120 9.9E-32 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS08475 6d0f569366de98ffda2757bc60193f6d 129 Gene3D G3DSA:3.40.50.2300 4 125 2.8E-37 T 22-04-2016 APT61_RS08475 6d0f569366de98ffda2757bc60193f6d 129 SMART SM00448 6 120 4.0E-34 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS08475 6d0f569366de98ffda2757bc60193f6d 129 PANTHER PTHR26402 6 126 1.8E-40 T 22-04-2016 APT61_RS08140 952e49fba525ddd7f676bb0fdcc818e7 134 SUPERFAMILY SSF101116 8 128 4.58E-38 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 APT61_RS08140 952e49fba525ddd7f676bb0fdcc818e7 134 PANTHER PTHR34773 1 125 3.0E-44 T 22-04-2016 APT61_RS08140 952e49fba525ddd7f676bb0fdcc818e7 134 PIRSF PIRSF039090 1 133 2.9E-41 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 APT61_RS08140 952e49fba525ddd7f676bb0fdcc818e7 134 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 4.2E-38 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 APT61_RS08140 952e49fba525ddd7f676bb0fdcc818e7 134 Pfam PF02561 Flagellar protein FliS 8 125 2.2E-37 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 APT61_RS08140 952e49fba525ddd7f676bb0fdcc818e7 134 Gene3D G3DSA:1.20.120.340 8 129 2.0E-41 T 22-04-2016 IPR003713 Flagellar protein FliS GO:0044780 APT61_RS17340 cddce4feeec95d71667ddf1cd2a0a859 491 Pfam PF07690 Major Facilitator Superfamily 18 366 1.7E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS17340 cddce4feeec95d71667ddf1cd2a0a859 491 Gene3D G3DSA:1.20.1250.20 214 406 6.8E-14 T 22-04-2016 APT61_RS17340 cddce4feeec95d71667ddf1cd2a0a859 491 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 1.7E-126 T 22-04-2016 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 APT61_RS17340 cddce4feeec95d71667ddf1cd2a0a859 491 Gene3D G3DSA:1.20.1250.20 17 199 2.1E-14 T 22-04-2016 APT61_RS17340 cddce4feeec95d71667ddf1cd2a0a859 491 SUPERFAMILY SSF103473 14 404 2.62E-41 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS17340 cddce4feeec95d71667ddf1cd2a0a859 491 PANTHER PTHR12778 1 404 1.5E-124 T 22-04-2016 APT61_RS15415 8b10c2fcc38dea0069ddba2524015059 402 Pfam PF07690 Major Facilitator Superfamily 223 386 6.7E-17 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS15415 8b10c2fcc38dea0069ddba2524015059 402 Gene3D G3DSA:1.20.1250.20 11 194 3.6E-13 T 22-04-2016 APT61_RS15415 8b10c2fcc38dea0069ddba2524015059 402 PANTHER PTHR23514:SF12 7 394 1.6E-248 T 22-04-2016 APT61_RS15415 8b10c2fcc38dea0069ddba2524015059 402 Gene3D G3DSA:1.20.1250.20 212 387 2.1E-21 T 22-04-2016 APT61_RS15415 8b10c2fcc38dea0069ddba2524015059 402 PANTHER PTHR23514 7 394 1.6E-248 T 22-04-2016 APT61_RS15415 8b10c2fcc38dea0069ddba2524015059 402 SUPERFAMILY SSF103473 6 390 1.83E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS12570 68bc2fa3e6f1042c79f754eb0d92377a 228 PANTHER PTHR30586 1 220 2.4E-139 T 22-04-2016 APT61_RS12570 68bc2fa3e6f1042c79f754eb0d92377a 228 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 199 1.1E-62 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APT61_RS12570 68bc2fa3e6f1042c79f754eb0d92377a 228 PANTHER PTHR30586:SF0 1 220 2.4E-139 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 APT61_RS12570 68bc2fa3e6f1042c79f754eb0d92377a 228 PIRSF PIRSF006102 1 218 1.3E-78 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APT61_RS12570 68bc2fa3e6f1042c79f754eb0d92377a 228 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.591 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 APT61_RS12570 68bc2fa3e6f1042c79f754eb0d92377a 228 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 9.6E-83 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 APT61_RS17660 af6083c6ad176c72111d3defe09f5df1 255 Pfam PF00005 ABC transporter 17 156 1.2E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS17660 af6083c6ad176c72111d3defe09f5df1 255 PANTHER PTHR24220:SF564 3 205 3.0E-137 T 22-04-2016 APT61_RS17660 af6083c6ad176c72111d3defe09f5df1 255 SMART SM00382 26 205 8.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS17660 af6083c6ad176c72111d3defe09f5df1 255 SUPERFAMILY SSF52540 1 212 8.31E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17660 af6083c6ad176c72111d3defe09f5df1 255 Gene3D G3DSA:3.40.50.300 1 211 3.5E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17660 af6083c6ad176c72111d3defe09f5df1 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS17660 af6083c6ad176c72111d3defe09f5df1 255 PANTHER PTHR24220 3 205 3.0E-137 T 22-04-2016 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 PANTHER PTHR12128:SF30 1 299 1.1E-148 T 22-04-2016 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 TIGRFAM TIGR00683 nanA: N-acetylneuraminate lyase 5 296 8.2E-157 T 22-04-2016 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|UniPathway: UPA00629 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 SUPERFAMILY SSF51569 5 290 8.79E-83 T 22-04-2016 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 SMART SM01130 4 293 3.5E-87 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 9.8E-106 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 2.9E-21 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 2.9E-21 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 2.9E-21 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 2.9E-21 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 5 294 50.7 T 22-04-2016 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|UniPathway: UPA00629 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 PIRSF PIRSF001365 1 299 6.4E-82 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 PANTHER PTHR12128 1 299 1.1E-148 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS05445 adfc6bd83ab2e69b5a00ad59bf23dfbf 299 Gene3D G3DSA:3.20.20.70 5 292 3.6E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS19770 3e0ca04c1c43ab941cf60af268fa912b 427 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 420 8.2E-161 T 22-04-2016 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 APT61_RS19770 3e0ca04c1c43ab941cf60af268fa912b 427 Gene3D G3DSA:3.90.1150.10 320 423 6.1E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS19770 3e0ca04c1c43ab941cf60af268fa912b 427 Gene3D G3DSA:3.90.1150.10 2 59 6.1E-42 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS19770 3e0ca04c1c43ab941cf60af268fa912b 427 PANTHER PTHR11986 1 427 0.0 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS19770 3e0ca04c1c43ab941cf60af268fa912b 427 Pfam PF00202 Aminotransferase class-III 17 420 5.3E-137 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS19770 3e0ca04c1c43ab941cf60af268fa912b 427 PANTHER PTHR11986:SF70 1 427 0.0 T 22-04-2016 APT61_RS19770 3e0ca04c1c43ab941cf60af268fa912b 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 273 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS19770 3e0ca04c1c43ab941cf60af268fa912b 427 Gene3D G3DSA:3.40.640.10 60 318 1.0E-82 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS19770 3e0ca04c1c43ab941cf60af268fa912b 427 SUPERFAMILY SSF53383 20 423 1.04E-133 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 SUPERFAMILY SSF100920 384 535 2.22E-50 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 SUPERFAMILY SSF53067 200 377 1.1E-51 T 22-04-2016 APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 PANTHER PTHR19375:SF176 19 569 0.0 T 22-04-2016 APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 Pfam PF00012 Hsp70 protein 21 600 2.0E-202 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.0E-54 T 22-04-2016 IPR013126 Heat shock protein 70 family APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 SUPERFAMILY SSF53067 19 196 2.07E-51 T 22-04-2016 APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 Gene3D G3DSA:3.30.420.40 20 69 1.7E-53 T 22-04-2016 APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 Gene3D G3DSA:3.30.420.40 133 205 1.7E-53 T 22-04-2016 APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 PANTHER PTHR19375 19 569 0.0 T 22-04-2016 APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 Gene3D G3DSA:3.90.640.10 239 310 2.6E-10 T 22-04-2016 APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 Gene3D G3DSA:2.60.34.10 387 528 9.4E-55 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 2.1E-271 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.586 T 22-04-2016 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 Gene3D G3DSA:3.30.420.40 206 238 1.3E-31 T 22-04-2016 APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 Gene3D G3DSA:3.30.420.40 314 356 1.3E-31 T 22-04-2016 APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 SUPERFAMILY SSF100934 504 615 3.34E-37 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 Gene3D G3DSA:1.20.1270.10 529 615 6.8E-33 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain APT61_RS05945 8169e06ae1f203ec25f81c6d12bd5544 616 Gene3D G3DSA:3.30.30.30 70 118 8.0E-10 T 22-04-2016 APT61_RS03730 9427a89d7732d5e319fb12a936878454 395 PANTHER PTHR11808:SF45 3 395 3.3E-265 T 22-04-2016 APT61_RS03730 9427a89d7732d5e319fb12a936878454 395 PANTHER PTHR11808 3 395 3.3E-265 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APT61_RS03730 9427a89d7732d5e319fb12a936878454 395 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 1.7E-169 T 22-04-2016 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936|UniPathway: UPA00051 APT61_RS03730 9427a89d7732d5e319fb12a936878454 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APT61_RS03730 9427a89d7732d5e319fb12a936878454 395 Gene3D G3DSA:3.90.1150.10 259 394 1.8E-38 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS03730 9427a89d7732d5e319fb12a936878454 395 Gene3D G3DSA:3.40.640.10 5 258 7.3E-73 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS03730 9427a89d7732d5e319fb12a936878454 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 3.3E-117 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APT61_RS03730 9427a89d7732d5e319fb12a936878454 395 PIRSF PIRSF001434 1 395 2.9E-118 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 APT61_RS03730 9427a89d7732d5e319fb12a936878454 395 SUPERFAMILY SSF53383 24 392 3.06E-86 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS21775 dc9e74122fbc992ad29386d716c2740e 772 SUPERFAMILY SSF117125 666 771 1.31E-32 T 22-04-2016 APT61_RS21775 dc9e74122fbc992ad29386d716c2740e 772 PANTHER PTHR22762 1 684 0.0 T 22-04-2016 APT61_RS21775 dc9e74122fbc992ad29386d716c2740e 772 Pfam PF13802 Galactose mutarotase-like 159 218 1.1E-15 T 22-04-2016 IPR025887 Glycoside hydrolase family 31, N-terminal domain APT61_RS21775 dc9e74122fbc992ad29386d716c2740e 772 Pfam PF01055 Glycosyl hydrolases family 31 240 667 1.3E-119 T 22-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 APT61_RS21775 dc9e74122fbc992ad29386d716c2740e 772 Gene3D G3DSA:3.20.20.70 385 444 9.6E-14 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS21775 dc9e74122fbc992ad29386d716c2740e 772 Gene3D G3DSA:3.20.20.70 275 350 9.6E-14 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS21775 dc9e74122fbc992ad29386d716c2740e 772 PANTHER PTHR22762:SF88 1 684 0.0 T 22-04-2016 APT61_RS21775 dc9e74122fbc992ad29386d716c2740e 772 SUPERFAMILY SSF74650 1 247 1.57E-66 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APT61_RS21775 dc9e74122fbc992ad29386d716c2740e 772 SUPERFAMILY SSF51445 263 603 8.21E-93 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS21775 dc9e74122fbc992ad29386d716c2740e 772 SUPERFAMILY SSF51011 586 665 3.88E-21 T 22-04-2016 APT61_RS21880 e6a576818dbd86053464ebb0db5099c9 315 Gene3D G3DSA:3.40.50.2300 54 162 5.9E-15 T 22-04-2016 APT61_RS21880 e6a576818dbd86053464ebb0db5099c9 315 SMART SM00354 1 71 3.2E-27 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS21880 e6a576818dbd86053464ebb0db5099c9 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.2E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS21880 e6a576818dbd86053464ebb0db5099c9 315 SUPERFAMILY SSF53822 59 295 8.64E-17 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS21880 e6a576818dbd86053464ebb0db5099c9 315 Pfam PF13377 Periplasmic binding protein-like domain 162 292 4.5E-9 T 22-04-2016 APT61_RS21880 e6a576818dbd86053464ebb0db5099c9 315 Gene3D G3DSA:1.10.260.40 3 53 1.8E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS21880 e6a576818dbd86053464ebb0db5099c9 315 SUPERFAMILY SSF47413 2 59 2.31E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS21880 e6a576818dbd86053464ebb0db5099c9 315 Gene3D G3DSA:3.40.50.2300 163 295 5.2E-14 T 22-04-2016 APT61_RS21880 e6a576818dbd86053464ebb0db5099c9 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.0E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS21880 e6a576818dbd86053464ebb0db5099c9 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.0E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS21880 e6a576818dbd86053464ebb0db5099c9 315 PANTHER PTHR30146 1 289 1.4E-42 T 22-04-2016 APT61_RS05110 2bcd2cd6376526f953c719f3f05fa6c3 81 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 72 2.2E-29 T 22-04-2016 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 APT61_RS05110 2bcd2cd6376526f953c719f3f05fa6c3 81 SUPERFAMILY SSF52833 1 71 4.84E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS05110 2bcd2cd6376526f953c719f3f05fa6c3 81 Pfam PF00462 Glutaredoxin 3 58 4.1E-10 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APT61_RS05110 2bcd2cd6376526f953c719f3f05fa6c3 81 Gene3D G3DSA:3.40.30.10 1 74 1.3E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS05110 2bcd2cd6376526f953c719f3f05fa6c3 81 PANTHER PTHR34386 1 80 2.4E-37 T 22-04-2016 APT61_RS05110 2bcd2cd6376526f953c719f3f05fa6c3 81 PANTHER PTHR34386:SF3 1 80 2.4E-37 T 22-04-2016 APT61_RS01490 04747ef2d3a94329da7d1ff9c0e04ae9 221 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS01490 04747ef2d3a94329da7d1ff9c0e04ae9 221 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 1.1E-93 T 22-04-2016 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 APT61_RS01490 04747ef2d3a94329da7d1ff9c0e04ae9 221 PANTHER PTHR24220 3 216 1.5E-127 T 22-04-2016 APT61_RS01490 04747ef2d3a94329da7d1ff9c0e04ae9 221 Pfam PF00005 ABC transporter 18 165 1.1E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS01490 04747ef2d3a94329da7d1ff9c0e04ae9 221 SMART SM00382 27 214 2.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS01490 04747ef2d3a94329da7d1ff9c0e04ae9 221 SUPERFAMILY SSF52540 1 216 5.58E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01490 04747ef2d3a94329da7d1ff9c0e04ae9 221 PANTHER PTHR24220:SF470 3 216 1.5E-127 T 22-04-2016 APT61_RS01490 04747ef2d3a94329da7d1ff9c0e04ae9 221 Gene3D G3DSA:3.40.50.300 1 215 5.0E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07510 8b9b2efbbb6974b5b94fb7e6cf18ddc1 384 Gene3D G3DSA:3.30.390.10 1 129 1.1E-33 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS07510 8b9b2efbbb6974b5b94fb7e6cf18ddc1 384 SUPERFAMILY SSF54826 1 127 4.55E-30 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS07510 8b9b2efbbb6974b5b94fb7e6cf18ddc1 384 SMART SM00922 150 253 9.2E-22 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APT61_RS07510 8b9b2efbbb6974b5b94fb7e6cf18ddc1 384 Gene3D G3DSA:3.20.20.120 130 368 1.0E-66 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS07510 8b9b2efbbb6974b5b94fb7e6cf18ddc1 384 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 33 125 3.0E-9 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APT61_RS07510 8b9b2efbbb6974b5b94fb7e6cf18ddc1 384 PANTHER PTHR13794 1 377 1.6E-56 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APT61_RS07510 8b9b2efbbb6974b5b94fb7e6cf18ddc1 384 SUPERFAMILY SSF51604 113 381 1.57E-63 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS07510 8b9b2efbbb6974b5b94fb7e6cf18ddc1 384 Pfam PF13378 Enolase C-terminal domain-like 153 372 2.2E-49 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS07510 8b9b2efbbb6974b5b94fb7e6cf18ddc1 384 PANTHER PTHR13794:SF4 1 377 1.6E-56 T 22-04-2016 APT61_RS03500 62681ec5a303a1ffc71cebd6405d8951 275 Pfam PF01774 UreD urease accessory protein 55 244 1.6E-43 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 APT61_RS03500 62681ec5a303a1ffc71cebd6405d8951 275 PANTHER PTHR33643 14 194 4.7E-31 T 22-04-2016 APT61_RS03500 62681ec5a303a1ffc71cebd6405d8951 275 Hamap MF_01384 Urease accessory protein UreD [ureD]. 14 259 27.804 T 22-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 APT61_RS03500 62681ec5a303a1ffc71cebd6405d8951 275 PANTHER PTHR33643:SF1 14 194 4.7E-31 T 22-04-2016 APT61_RS11975 5257caa5b0b9c6c5497c6496766431f7 105 Gene3D G3DSA:1.10.10.710 20 83 3.4E-27 T 22-04-2016 IPR009813 Uncharacterised protein family YebG APT61_RS11975 5257caa5b0b9c6c5497c6496766431f7 105 Pfam PF07130 YebG protein 1 74 3.2E-32 T 22-04-2016 IPR009813 Uncharacterised protein family YebG APT61_RS07130 24dd4934826cd5ab176e289130f581d8 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 6 46 2.8E-5 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT61_RS07130 24dd4934826cd5ab176e289130f581d8 341 SUPERFAMILY SSF161098 135 321 2.22E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07130 24dd4934826cd5ab176e289130f581d8 341 PANTHER PTHR30325 1 341 1.4E-201 T 22-04-2016 APT61_RS07130 24dd4934826cd5ab176e289130f581d8 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 1.6E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07130 24dd4934826cd5ab176e289130f581d8 341 Gene3D G3DSA:1.10.3720.10 134 337 1.2E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15465 ae444369a0238cc835358bf9b4a52551 441 Pfam PF04055 Radical SAM superfamily 146 323 4.5E-30 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS15465 ae444369a0238cc835358bf9b4a52551 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 APT61_RS15465 ae444369a0238cc835358bf9b4a52551 441 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 438 4.9E-199 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 APT61_RS15465 ae444369a0238cc835358bf9b4a52551 441 SUPERFAMILY SSF102114 107 371 3.92E-54 T 22-04-2016 APT61_RS15465 ae444369a0238cc835358bf9b4a52551 441 Pfam PF00919 Uncharacterized protein family UPF0004 9 90 1.1E-20 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 APT61_RS15465 ae444369a0238cc835358bf9b4a52551 441 Gene3D G3DSA:2.40.50.140 380 441 5.9E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS15465 ae444369a0238cc835358bf9b4a52551 441 SMART SM00729 140 365 3.4E-55 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APT61_RS15465 ae444369a0238cc835358bf9b4a52551 441 PANTHER PTHR11918:SF57 1 441 1.7E-249 T 22-04-2016 APT61_RS15465 ae444369a0238cc835358bf9b4a52551 441 PANTHER PTHR11918 1 441 1.7E-249 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein APT61_RS15465 ae444369a0238cc835358bf9b4a52551 441 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 440 63.678 T 22-04-2016 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 APT61_RS15465 ae444369a0238cc835358bf9b4a52551 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 438 1.5E-108 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 APT61_RS15465 ae444369a0238cc835358bf9b4a52551 441 Gene3D G3DSA:3.80.30.20 138 377 3.1E-75 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe APT61_RS21655 c709a843216a63566e140346d88b41d6 424 PANTHER PTHR23417 129 139 3.0E-146 T 22-04-2016 APT61_RS21655 c709a843216a63566e140346d88b41d6 424 PANTHER PTHR23417 1 110 3.0E-146 T 22-04-2016 APT61_RS21655 c709a843216a63566e140346d88b41d6 424 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 32 210 2.9E-66 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 APT61_RS21655 c709a843216a63566e140346d88b41d6 424 PANTHER PTHR23417:SF2 189 420 3.0E-146 T 22-04-2016 APT61_RS21655 c709a843216a63566e140346d88b41d6 424 PANTHER PTHR23417:SF2 1 110 3.0E-146 T 22-04-2016 APT61_RS21655 c709a843216a63566e140346d88b41d6 424 SUPERFAMILY SSF53756 56 416 2.25E-17 T 22-04-2016 APT61_RS21655 c709a843216a63566e140346d88b41d6 424 PANTHER PTHR23417 189 420 3.0E-146 T 22-04-2016 APT61_RS21655 c709a843216a63566e140346d88b41d6 424 Pfam PF00534 Glycosyl transferases group 1 233 397 9.0E-12 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APT61_RS21655 c709a843216a63566e140346d88b41d6 424 PANTHER PTHR23417:SF2 129 139 3.0E-146 T 22-04-2016 APT61_RS18710 47735eabb16b977aa1c71cac11f9d268 138 SUPERFAMILY SSF88723 3 137 3.36E-30 T 22-04-2016 IPR029060 PIN domain-like APT61_RS18710 47735eabb16b977aa1c71cac11f9d268 138 PANTHER PTHR33653 1 136 5.2E-34 T 22-04-2016 APT61_RS18710 47735eabb16b977aa1c71cac11f9d268 138 Pfam PF01850 PIN domain 5 129 7.8E-12 T 22-04-2016 IPR002716 PIN domain APT61_RS18710 47735eabb16b977aa1c71cac11f9d268 138 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 5 135 11.198 T 22-04-2016 IPR022907 VapC family GO:0004540 APT61_RS18710 47735eabb16b977aa1c71cac11f9d268 138 PANTHER PTHR33653:SF2 1 136 5.2E-34 T 22-04-2016 APT61_RS18710 47735eabb16b977aa1c71cac11f9d268 138 Gene3D G3DSA:3.40.50.1010 3 136 1.0E-27 T 22-04-2016 IPR029060 PIN domain-like APT61_RS06470 53ec05be75844aa916f7001c6502c066 411 PRINTS PR00762 Chloride channel signature 153 172 7.2E-7 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS06470 53ec05be75844aa916f7001c6502c066 411 PRINTS PR00762 Chloride channel signature 320 340 7.2E-7 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS06470 53ec05be75844aa916f7001c6502c066 411 PRINTS PR00762 Chloride channel signature 103 122 7.2E-7 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS06470 53ec05be75844aa916f7001c6502c066 411 SUPERFAMILY SSF81340 10 398 5.23E-39 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APT61_RS06470 53ec05be75844aa916f7001c6502c066 411 Gene3D G3DSA:1.10.3080.10 16 367 2.7E-22 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APT61_RS06470 53ec05be75844aa916f7001c6502c066 411 Pfam PF00654 Voltage gated chloride channel 93 390 3.4E-19 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS11340 69ea0dac6ffe232eb20dd5ad348597e6 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 146 170 5.0E-9 T 22-04-2016 APT61_RS11340 69ea0dac6ffe232eb20dd5ad348597e6 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 116 136 5.0E-9 T 22-04-2016 APT61_RS11340 69ea0dac6ffe232eb20dd5ad348597e6 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 412 431 5.0E-9 T 22-04-2016 APT61_RS11340 69ea0dac6ffe232eb20dd5ad348597e6 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 25 49 5.0E-9 T 22-04-2016 APT61_RS11340 69ea0dac6ffe232eb20dd5ad348597e6 479 Gene3D G3DSA:1.20.1250.20 279 465 1.5E-17 T 22-04-2016 APT61_RS11340 69ea0dac6ffe232eb20dd5ad348597e6 479 Gene3D G3DSA:1.20.1250.20 19 198 1.8E-23 T 22-04-2016 APT61_RS11340 69ea0dac6ffe232eb20dd5ad348597e6 479 PANTHER PTHR23501:SF5 12 468 2.2E-102 T 22-04-2016 APT61_RS11340 69ea0dac6ffe232eb20dd5ad348597e6 479 Pfam PF07690 Major Facilitator Superfamily 27 422 3.8E-39 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS11340 69ea0dac6ffe232eb20dd5ad348597e6 479 PANTHER PTHR23501 12 468 2.2E-102 T 22-04-2016 APT61_RS11340 69ea0dac6ffe232eb20dd5ad348597e6 479 SUPERFAMILY SSF103473 260 472 1.14E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11340 69ea0dac6ffe232eb20dd5ad348597e6 479 SUPERFAMILY SSF103473 11 200 1.14E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS02340 e9ff87b2f6cbc07850e519f60813e1f6 98 PIRSF PIRSF002097 1 98 4.0E-46 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APT61_RS02340 e9ff87b2f6cbc07850e519f60813e1f6 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.7E-14 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APT61_RS02340 e9ff87b2f6cbc07850e519f60813e1f6 98 Gene3D G3DSA:1.10.10.60 27 98 1.7E-28 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS02340 e9ff87b2f6cbc07850e519f60813e1f6 98 PANTHER PTHR32071 5 98 3.4E-34 T 22-04-2016 APT61_RS02340 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 7.6E-35 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APT61_RS02340 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 7.6E-35 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APT61_RS02340 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 7.6E-35 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APT61_RS02340 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 7.6E-35 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APT61_RS02340 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APT61_RS02340 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APT61_RS02340 e9ff87b2f6cbc07850e519f60813e1f6 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.769 T 22-04-2016 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 APT61_RS02340 e9ff87b2f6cbc07850e519f60813e1f6 98 SUPERFAMILY SSF46689 4 98 3.88E-27 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS15180 926ed2813295b136cfb28337ed03c7a7 161 SUPERFAMILY SSF103054 82 156 2.22E-10 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain APT61_RS15180 926ed2813295b136cfb28337ed03c7a7 161 Pfam PF04612 Type II secretion system (T2SS), protein M 6 156 1.7E-33 T 22-04-2016 IPR007690 Type II secretion system, protein M GO:0006858 APT61_RS15180 926ed2813295b136cfb28337ed03c7a7 161 Gene3D G3DSA:3.30.1360.100 85 152 5.2E-6 T 22-04-2016 IPR023229 Type II secretion system protein M, periplasmic domain APT61_RS01450 05d3040b9313e39263a491578d8a4a69 169 PANTHER PTHR35011:SF2 3 168 2.7E-39 T 22-04-2016 APT61_RS01450 05d3040b9313e39263a491578d8a4a69 169 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 152 1.1E-24 T 22-04-2016 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component APT61_RS01450 05d3040b9313e39263a491578d8a4a69 169 PANTHER PTHR35011 3 168 2.7E-39 T 22-04-2016 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 Pfam PF03979 Sigma-70 factor, region 1.1 4 81 2.9E-30 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 SUPERFAMILY SSF88659 511 613 2.58E-25 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 405 418 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 Gene3D G3DSA:1.10.601.10 115 450 3.9E-140 T 22-04-2016 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 Gene3D G3DSA:1.10.601.10 23 114 0.001 T 22-04-2016 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 PANTHER PTHR30603:SF0 1 152 1.7E-252 T 22-04-2016 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 PANTHER PTHR30603:SF0 328 614 1.7E-252 T 22-04-2016 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 SUPERFAMILY SSF88946 115 448 1.46E-104 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 Gene3D G3DSA:1.10.10.10 545 614 1.3E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 377 602 3.6E-38 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 377 613 1.3E-120 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 Pfam PF04545 Sigma-70, region 4 549 602 8.9E-19 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 Pfam PF04546 Sigma-70, non-essential region 139 350 9.9E-75 T 22-04-2016 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 PANTHER PTHR30603 1 152 1.7E-252 T 22-04-2016 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 PANTHER PTHR30603 328 614 1.7E-252 T 22-04-2016 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 Gene3D G3DSA:1.10.10.10 454 505 1.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 Pfam PF04539 Sigma-70 region 3 460 535 3.5E-29 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 PRINTS PR00046 Major sigma-70 factor signature 574 589 6.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 PRINTS PR00046 Major sigma-70 factor signature 589 600 6.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 PRINTS PR00046 Major sigma-70 factor signature 553 565 6.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 PRINTS PR00046 Major sigma-70 factor signature 429 437 6.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 PRINTS PR00046 Major sigma-70 factor signature 405 418 6.4E-31 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 Pfam PF04542 Sigma-70 region 2 381 450 1.7E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.4E-12 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 SUPERFAMILY SSF88659 454 527 8.78E-21 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 574 600 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS03440 f2bad7aa7124bded927a4fe6a70b3b99 615 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 614 46.644 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 APT61_RS20525 abf42c5b219919238a5fbe8deb780ae4 191 PANTHER PTHR30055 3 189 3.3E-40 T 22-04-2016 APT61_RS20525 abf42c5b219919238a5fbe8deb780ae4 191 Gene3D G3DSA:1.10.357.10 3 181 1.7E-18 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS20525 abf42c5b219919238a5fbe8deb780ae4 191 SUPERFAMILY SSF46689 3 67 5.13E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS20525 abf42c5b219919238a5fbe8deb780ae4 191 PANTHER PTHR30055:SF92 3 189 3.3E-40 T 22-04-2016 APT61_RS20525 abf42c5b219919238a5fbe8deb780ae4 191 SUPERFAMILY SSF48498 76 179 4.95E-6 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS03010 11176a122edd14ca829faf5f2fb492be 121 Pfam PF05656 Protein of unknown function (DUF805) 11 117 6.8E-36 T 22-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 APT61_RS03010 11176a122edd14ca829faf5f2fb492be 121 PANTHER PTHR34980 1 117 2.3E-33 T 22-04-2016 APT61_RS19370 78122596bcfdba45b7b9e715526ac95b 170 SMART SM00903 14 161 7.1E-46 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APT61_RS19370 78122596bcfdba45b7b9e715526ac95b 170 Pfam PF01613 Flavin reductase like domain 14 162 3.7E-25 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APT61_RS19370 78122596bcfdba45b7b9e715526ac95b 170 PANTHER PTHR30466 6 162 2.7E-75 T 22-04-2016 APT61_RS19370 78122596bcfdba45b7b9e715526ac95b 170 SUPERFAMILY SSF50475 9 162 3.97E-45 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS19370 78122596bcfdba45b7b9e715526ac95b 170 TIGRFAM TIGR02296 HpaC: 4-hydroxyphenylacetate 3-monooxygenase, reductase component 10 162 7.4E-79 T 22-04-2016 IPR011982 4-hydroxyphenylacetate 3-monooxygenase, reductase component GO:0016651|GO:0042537|GO:0051287|GO:0055114 UniPathway: UPA00208 APT61_RS19370 78122596bcfdba45b7b9e715526ac95b 170 PANTHER PTHR30466:SF2 6 162 2.7E-75 T 22-04-2016 APT61_RS19370 78122596bcfdba45b7b9e715526ac95b 170 Gene3D G3DSA:2.30.110.10 5 160 4.5E-47 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS04270 e5a7797b236c4a2ce5e0c95c6219ad2a 258 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 47 60 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APT61_RS04270 e5a7797b236c4a2ce5e0c95c6219ad2a 258 SUPERFAMILY SSF53850 1 254 1.7E-65 T 22-04-2016 APT61_RS04270 e5a7797b236c4a2ce5e0c95c6219ad2a 258 Gene3D G3DSA:3.40.190.10 112 208 1.2E-27 T 22-04-2016 APT61_RS04270 e5a7797b236c4a2ce5e0c95c6219ad2a 258 PANTHER PTHR18966 21 254 3.6E-74 T 22-04-2016 APT61_RS04270 e5a7797b236c4a2ce5e0c95c6219ad2a 258 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 9 250 4.8E-82 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 APT61_RS04270 e5a7797b236c4a2ce5e0c95c6219ad2a 258 Gene3D G3DSA:3.40.190.10 21 110 6.7E-42 T 22-04-2016 APT61_RS04270 e5a7797b236c4a2ce5e0c95c6219ad2a 258 Gene3D G3DSA:3.40.190.10 212 255 6.7E-42 T 22-04-2016 APT61_RS04270 e5a7797b236c4a2ce5e0c95c6219ad2a 258 PANTHER PTHR18966:SF237 21 254 3.6E-74 T 22-04-2016 APT61_RS04270 e5a7797b236c4a2ce5e0c95c6219ad2a 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 251 8.0E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS04270 e5a7797b236c4a2ce5e0c95c6219ad2a 258 SMART SM00062 24 253 6.2E-67 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS05410 b2294bad45d36d679806003ec7a2d7e2 399 Gene3D G3DSA:2.40.50.100 71 99 1.1E-14 T 22-04-2016 APT61_RS05410 b2294bad45d36d679806003ec7a2d7e2 399 Gene3D G3DSA:2.40.50.100 246 280 1.1E-14 T 22-04-2016 APT61_RS05410 b2294bad45d36d679806003ec7a2d7e2 399 PANTHER PTHR30386 27 399 1.4E-142 T 22-04-2016 APT61_RS05410 b2294bad45d36d679806003ec7a2d7e2 399 Pfam PF13533 Biotin-lipoyl like 71 103 1.7E-8 T 22-04-2016 APT61_RS05410 b2294bad45d36d679806003ec7a2d7e2 399 ProSitePatterns PS00543 HlyD family secretion proteins signature. 364 386 - T 22-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 APT61_RS05410 b2294bad45d36d679806003ec7a2d7e2 399 Pfam PF13437 HlyD family secretion protein 249 347 1.6E-14 T 22-04-2016 APT61_RS05410 b2294bad45d36d679806003ec7a2d7e2 399 PANTHER PTHR30386:SF4 27 399 1.4E-142 T 22-04-2016 APT61_RS05410 b2294bad45d36d679806003ec7a2d7e2 399 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 364 379 3.4E-39 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS05410 b2294bad45d36d679806003ec7a2d7e2 399 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 318 341 3.4E-39 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS05410 b2294bad45d36d679806003ec7a2d7e2 399 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 77 97 3.4E-39 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS05410 b2294bad45d36d679806003ec7a2d7e2 399 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 261 282 3.4E-39 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS05410 b2294bad45d36d679806003ec7a2d7e2 399 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 294 318 3.4E-39 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS05410 b2294bad45d36d679806003ec7a2d7e2 399 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 379 399 3.4E-39 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS05410 b2294bad45d36d679806003ec7a2d7e2 399 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 35 58 3.4E-39 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS15295 42d9cc5d567e797c1e84bbcf525adc78 230 SUPERFAMILY SSF52172 1 125 3.7E-40 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS15295 42d9cc5d567e797c1e84bbcf525adc78 230 Pfam PF00072 Response regulator receiver domain 4 114 1.7E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS15295 42d9cc5d567e797c1e84bbcf525adc78 230 Gene3D G3DSA:1.10.10.10 127 228 2.3E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15295 42d9cc5d567e797c1e84bbcf525adc78 230 PANTHER PTHR26402 2 228 2.1E-95 T 22-04-2016 APT61_RS15295 42d9cc5d567e797c1e84bbcf525adc78 230 Gene3D G3DSA:3.40.50.2300 2 123 1.1E-40 T 22-04-2016 APT61_RS15295 42d9cc5d567e797c1e84bbcf525adc78 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 225 8.1E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS15295 42d9cc5d567e797c1e84bbcf525adc78 230 SMART SM00862 149 225 1.7E-29 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS15295 42d9cc5d567e797c1e84bbcf525adc78 230 PANTHER PTHR26402:SF50 2 228 2.1E-95 T 22-04-2016 APT61_RS15295 42d9cc5d567e797c1e84bbcf525adc78 230 SUPERFAMILY SSF46894 125 226 1.98E-31 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS15295 42d9cc5d567e797c1e84bbcf525adc78 230 SMART SM00448 2 113 3.5E-39 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS00250 ae236340e40d2d0c142380aae0665893 313 SUPERFAMILY SSF55729 2 146 1.58E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS00250 ae236340e40d2d0c142380aae0665893 313 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 158 297 4.4E-48 T 22-04-2016 IPR012660 Thioesterase, putative APT61_RS00250 ae236340e40d2d0c142380aae0665893 313 Gene3D G3DSA:3.10.129.10 146 299 4.0E-63 T 22-04-2016 IPR029069 HotDog domain APT61_RS00250 ae236340e40d2d0c142380aae0665893 313 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 165 298 8.9E-48 T 22-04-2016 IPR012660 Thioesterase, putative APT61_RS00250 ae236340e40d2d0c142380aae0665893 313 PANTHER PTHR23091 1 178 2.0E-116 T 22-04-2016 APT61_RS00250 ae236340e40d2d0c142380aae0665893 313 Pfam PF00583 Acetyltransferase (GNAT) family 51 122 2.3E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS00250 ae236340e40d2d0c142380aae0665893 313 SUPERFAMILY SSF54637 155 297 3.95E-38 T 22-04-2016 IPR029069 HotDog domain APT61_RS00250 ae236340e40d2d0c142380aae0665893 313 Gene3D G3DSA:3.40.630.30 9 145 2.2E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS00250 ae236340e40d2d0c142380aae0665893 313 PANTHER PTHR23091:SF249 1 178 2.0E-116 T 22-04-2016 APT61_RS19755 d122ac5b6c3c0ea194991bc8857d0623 325 ProDom PD135861 METAL-BINDING IRON CSID GAB CYTOPLASMIC 3D-STRUCTURE HOMOLOG DIRECT SEQUENCING 19 313 3.0E-139 T 22-04-2016 IPR015038 Uncharacterised protein family CsiD GO:0005506 APT61_RS19755 d122ac5b6c3c0ea194991bc8857d0623 325 SUPERFAMILY SSF51197 19 314 1.42E-90 T 22-04-2016 APT61_RS19755 d122ac5b6c3c0ea194991bc8857d0623 325 Hamap MF_01083 Protein CsiD [csiD]. 1 325 71.718 T 22-04-2016 IPR015038 Uncharacterised protein family CsiD GO:0005506 APT61_RS19755 d122ac5b6c3c0ea194991bc8857d0623 325 Pfam PF08943 CsiD 21 313 6.7E-147 T 22-04-2016 IPR015038 Uncharacterised protein family CsiD GO:0005506 APT61_RS19755 d122ac5b6c3c0ea194991bc8857d0623 325 Gene3D G3DSA:3.60.130.10 18 324 7.9E-129 T 22-04-2016 APT61_RS02410 039b1633bc98e6f2393af0364f0f9f8b 338 PANTHER PTHR34138:SF1 1 335 1.7E-98 T 22-04-2016 APT61_RS02410 039b1633bc98e6f2393af0364f0f9f8b 338 PIRSF PIRSF038471 2 284 5.8E-74 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APT61_RS02410 039b1633bc98e6f2393af0364f0f9f8b 338 PANTHER PTHR34138 1 335 1.7E-98 T 22-04-2016 APT61_RS02410 039b1633bc98e6f2393af0364f0f9f8b 338 Pfam PF04085 rod shape-determining protein MreC 123 269 1.0E-36 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APT61_RS02410 039b1633bc98e6f2393af0364f0f9f8b 338 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 283 4.5E-123 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 APT61_RS20880 6020f5f858abc0d5e157dd74d13e5f9d 138 PANTHER PTHR30615 1 138 6.0E-71 T 22-04-2016 APT61_RS20880 6020f5f858abc0d5e157dd74d13e5f9d 138 SUPERFAMILY SSF111038 1 138 2.49E-45 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 APT61_RS20880 6020f5f858abc0d5e157dd74d13e5f9d 138 PIRSF PIRSF004681 1 138 6.0E-43 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 APT61_RS20880 6020f5f858abc0d5e157dd74d13e5f9d 138 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 5 138 1.1E-46 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 APT61_RS20880 6020f5f858abc0d5e157dd74d13e5f9d 138 Pfam PF01894 Uncharacterised protein family UPF0047 19 134 7.3E-35 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 APT61_RS20880 6020f5f858abc0d5e157dd74d13e5f9d 138 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 99 117 - T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 APT61_RS20880 6020f5f858abc0d5e157dd74d13e5f9d 138 Gene3D G3DSA:2.60.120.460 1 138 4.4E-54 T 22-04-2016 IPR001602 Uncharacterised protein family UPF0047 APT61_RS06570 bf01a5592c590c35fae8a373079be663 179 Pfam PF00857 Isochorismatase family 4 156 6.6E-31 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS06570 bf01a5592c590c35fae8a373079be663 179 PANTHER PTHR11080 1 176 1.3E-32 T 22-04-2016 APT61_RS06570 bf01a5592c590c35fae8a373079be663 179 Gene3D G3DSA:3.40.50.850 2 175 2.0E-40 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS06570 bf01a5592c590c35fae8a373079be663 179 PANTHER PTHR11080:SF16 1 176 1.3E-32 T 22-04-2016 APT61_RS06570 bf01a5592c590c35fae8a373079be663 179 SUPERFAMILY SSF52499 2 175 4.06E-37 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS21070 d9fd69b1a385d4fb0bb8bcb3ff83d1fd 434 PIRSF PIRSF001362 1 434 4.2E-229 T 22-04-2016 APT61_RS21070 d9fd69b1a385d4fb0bb8bcb3ff83d1fd 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 9 255 1.5E-120 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 APT61_RS21070 d9fd69b1a385d4fb0bb8bcb3ff83d1fd 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 256 434 3.3E-91 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 APT61_RS21070 d9fd69b1a385d4fb0bb8bcb3ff83d1fd 434 PANTHER PTHR21631 4 434 1.0E-173 T 22-04-2016 APT61_RS21070 d9fd69b1a385d4fb0bb8bcb3ff83d1fd 434 Gene3D G3DSA:3.20.20.60 4 417 8.5E-173 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS21070 d9fd69b1a385d4fb0bb8bcb3ff83d1fd 434 Pfam PF00463 Isocitrate lyase family 8 255 4.1E-61 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 APT61_RS21070 d9fd69b1a385d4fb0bb8bcb3ff83d1fd 434 Pfam PF00463 Isocitrate lyase family 257 434 1.9E-49 T 22-04-2016 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969|UniPathway: UPA00703 APT61_RS21070 d9fd69b1a385d4fb0bb8bcb3ff83d1fd 434 ProSitePatterns PS00161 Isocitrate lyase signature. 193 198 - T 22-04-2016 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 APT61_RS21070 d9fd69b1a385d4fb0bb8bcb3ff83d1fd 434 SUPERFAMILY SSF51621 4 417 4.49E-157 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS14635 ca1ba1c1a9fb3b751aa92465552b881b 367 SUPERFAMILY SSF53850 35 332 1.15E-28 T 22-04-2016 APT61_RS14635 ca1ba1c1a9fb3b751aa92465552b881b 367 PANTHER PTHR30006 209 361 1.1E-12 T 22-04-2016 APT61_RS14635 ca1ba1c1a9fb3b751aa92465552b881b 367 PANTHER PTHR30006 1 189 1.1E-12 T 22-04-2016 APT61_RS14635 ca1ba1c1a9fb3b751aa92465552b881b 367 Pfam PF13531 Bacterial extracellular solute-binding protein 40 308 1.1E-19 T 22-04-2016 APT61_RS14635 ca1ba1c1a9fb3b751aa92465552b881b 367 Gene3D G3DSA:3.40.190.10 137 292 4.5E-27 T 22-04-2016 APT61_RS14635 ca1ba1c1a9fb3b751aa92465552b881b 367 Gene3D G3DSA:3.40.190.10 293 309 9.2E-15 T 22-04-2016 APT61_RS14635 ca1ba1c1a9fb3b751aa92465552b881b 367 Gene3D G3DSA:3.40.190.10 1 136 9.2E-15 T 22-04-2016 APT61_RS15890 03b20276eca7c86511aea1993cbfe0a9 407 PANTHER PTHR22642 60 403 1.8E-149 T 22-04-2016 APT61_RS15890 03b20276eca7c86511aea1993cbfe0a9 407 SUPERFAMILY SSF51556 68 367 1.99E-81 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS15890 03b20276eca7c86511aea1993cbfe0a9 407 TIGRFAM TIGR01224 hutI: imidazolonepropionase 31 406 1.4E-141 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 APT61_RS15890 03b20276eca7c86511aea1993cbfe0a9 407 PANTHER PTHR22642:SF1 60 403 1.8E-149 T 22-04-2016 APT61_RS15890 03b20276eca7c86511aea1993cbfe0a9 407 Gene3D G3DSA:3.20.20.140 78 351 5.5E-42 T 22-04-2016 APT61_RS15890 03b20276eca7c86511aea1993cbfe0a9 407 Pfam PF01979 Amidohydrolase family 65 384 1.1E-16 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APT61_RS15890 03b20276eca7c86511aea1993cbfe0a9 407 Gene3D G3DSA:2.30.40.10 27 77 6.3E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS15890 03b20276eca7c86511aea1993cbfe0a9 407 Gene3D G3DSA:2.30.40.10 352 388 5.1E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS15890 03b20276eca7c86511aea1993cbfe0a9 407 SUPERFAMILY SSF51338 8 68 1.15E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS15890 03b20276eca7c86511aea1993cbfe0a9 407 SUPERFAMILY SSF51338 369 406 1.15E-27 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS15890 03b20276eca7c86511aea1993cbfe0a9 407 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 407 40.075 T 22-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 APT61_RS17040 19c01e29eb60cf0bb3031a94765f9ea1 284 Pfam PF14559 Tetratricopeptide repeat 124 190 5.0E-20 T 22-04-2016 APT61_RS17040 19c01e29eb60cf0bb3031a94765f9ea1 284 Gene3D G3DSA:1.25.40.10 197 284 1.3E-32 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS17040 19c01e29eb60cf0bb3031a94765f9ea1 284 Gene3D G3DSA:3.40.30.10 4 109 5.8E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS17040 19c01e29eb60cf0bb3031a94765f9ea1 284 Pfam PF00085 Thioredoxin 6 108 2.1E-19 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 APT61_RS17040 19c01e29eb60cf0bb3031a94765f9ea1 284 SUPERFAMILY SSF52833 2 112 3.28E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS17040 19c01e29eb60cf0bb3031a94765f9ea1 284 PANTHER PTHR10438 1 134 1.9E-72 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 APT61_RS17040 19c01e29eb60cf0bb3031a94765f9ea1 284 Gene3D G3DSA:1.25.40.10 110 196 5.3E-34 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS17040 19c01e29eb60cf0bb3031a94765f9ea1 284 PANTHER PTHR10438:SF288 1 134 1.9E-72 T 22-04-2016 APT61_RS17040 19c01e29eb60cf0bb3031a94765f9ea1 284 Pfam PF14561 Tetratricopeptide repeat 195 284 3.5E-28 T 22-04-2016 APT61_RS17040 19c01e29eb60cf0bb3031a94765f9ea1 284 SUPERFAMILY SSF48452 119 243 1.38E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS10660 3c8bac1cba9fc9b4d021512216e11969 342 PANTHER PTHR30137 1 341 1.8E-235 T 22-04-2016 APT61_RS10660 3c8bac1cba9fc9b4d021512216e11969 342 SUPERFAMILY SSF51679 7 333 6.15E-57 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS10660 3c8bac1cba9fc9b4d021512216e11969 342 PANTHER PTHR30137:SF3 1 341 1.8E-235 T 22-04-2016 APT61_RS10660 3c8bac1cba9fc9b4d021512216e11969 342 Gene3D G3DSA:3.20.20.30 2 340 7.3E-64 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS10660 3c8bac1cba9fc9b4d021512216e11969 342 Pfam PF00296 Luciferase-like monooxygenase 8 256 2.8E-26 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS19665 03685ff28fa4491b34bd0b8755a3a41e 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 4.8E-22 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19665 03685ff28fa4491b34bd0b8755a3a41e 199 SMART SM00421 138 195 1.1E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19665 03685ff28fa4491b34bd0b8755a3a41e 199 SMART SM00448 3 114 2.4E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS19665 03685ff28fa4491b34bd0b8755a3a41e 199 PANTHER PTHR26402 3 195 2.3E-65 T 22-04-2016 APT61_RS19665 03685ff28fa4491b34bd0b8755a3a41e 199 Pfam PF00072 Response regulator receiver domain 5 114 8.7E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS19665 03685ff28fa4491b34bd0b8755a3a41e 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 3.8E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19665 03685ff28fa4491b34bd0b8755a3a41e 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 3.8E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19665 03685ff28fa4491b34bd0b8755a3a41e 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 3.8E-13 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19665 03685ff28fa4491b34bd0b8755a3a41e 199 SUPERFAMILY SSF52172 5 164 2.13E-31 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS19665 03685ff28fa4491b34bd0b8755a3a41e 199 Gene3D G3DSA:3.40.50.2300 5 145 1.2E-31 T 22-04-2016 APT61_RS19665 03685ff28fa4491b34bd0b8755a3a41e 199 ProSitePatterns PS00622 LuxR-type HTH domain signature. 155 182 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19665 03685ff28fa4491b34bd0b8755a3a41e 199 PANTHER PTHR26402:SF546 3 195 2.3E-65 T 22-04-2016 APT61_RS19665 03685ff28fa4491b34bd0b8755a3a41e 199 Gene3D G3DSA:1.10.10.10 146 197 8.2E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20275 4a555ad6688e9770bd610865fb2cd831 243 PANTHER PTHR10655 23 151 1.5E-12 T 22-04-2016 APT61_RS20275 4a555ad6688e9770bd610865fb2cd831 243 PANTHER PTHR10655 170 243 1.5E-12 T 22-04-2016 APT61_RS20275 4a555ad6688e9770bd610865fb2cd831 243 Gene3D G3DSA:3.40.50.1820 12 243 4.5E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS20275 4a555ad6688e9770bd610865fb2cd831 243 PANTHER PTHR10655:SF33 23 151 1.5E-12 T 22-04-2016 APT61_RS20275 4a555ad6688e9770bd610865fb2cd831 243 PANTHER PTHR10655:SF33 170 243 1.5E-12 T 22-04-2016 APT61_RS20275 4a555ad6688e9770bd610865fb2cd831 243 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 25 69 9.4E-6 T 22-04-2016 IPR005065 Platelet-activating factor acetylhydrolase GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 APT61_RS20275 4a555ad6688e9770bd610865fb2cd831 243 SUPERFAMILY SSF53474 15 243 1.77E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS20275 4a555ad6688e9770bd610865fb2cd831 243 Pfam PF00326 Prolyl oligopeptidase family 87 237 4.3E-13 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APT61_RS07290 eedbfb6171f615102719ac48b82e51ef 132 PANTHER PTHR33931:SF2 1 132 2.5E-52 T 22-04-2016 APT61_RS07290 eedbfb6171f615102719ac48b82e51ef 132 PANTHER PTHR33931 1 132 2.5E-52 T 22-04-2016 APT61_RS07290 eedbfb6171f615102719ac48b82e51ef 132 Pfam PF03788 LrgA family 23 114 4.0E-29 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 APT61_RS07290 eedbfb6171f615102719ac48b82e51ef 132 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.443 T 22-04-2016 IPR022957 Uncharacterised protein family UPF0299 APT61_RS07515 d702f3d951c01142d299bc467b5d12fd 538 Gene3D G3DSA:3.90.76.10 64 154 2.2E-27 T 22-04-2016 APT61_RS07515 d702f3d951c01142d299bc467b5d12fd 538 PANTHER PTHR30290 29 532 3.8E-100 T 22-04-2016 APT61_RS07515 d702f3d951c01142d299bc467b5d12fd 538 Gene3D G3DSA:3.40.190.10 155 299 1.5E-39 T 22-04-2016 APT61_RS07515 d702f3d951c01142d299bc467b5d12fd 538 SUPERFAMILY SSF53850 28 533 9.05E-112 T 22-04-2016 APT61_RS07515 d702f3d951c01142d299bc467b5d12fd 538 PIRSF PIRSF002741 5 534 4.7E-78 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APT61_RS07515 d702f3d951c01142d299bc467b5d12fd 538 Gene3D G3DSA:3.10.105.10 300 492 7.4E-35 T 22-04-2016 APT61_RS07515 d702f3d951c01142d299bc467b5d12fd 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 444 7.9E-84 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS16780 1f67dc90cfb27bd039ebb0b34cbf4244 278 PANTHER PTHR24220:SF442 7 247 4.5E-94 T 22-04-2016 APT61_RS16780 1f67dc90cfb27bd039ebb0b34cbf4244 278 Gene3D G3DSA:3.40.50.300 6 247 2.3E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16780 1f67dc90cfb27bd039ebb0b34cbf4244 278 PANTHER PTHR24220 7 247 4.5E-94 T 22-04-2016 APT61_RS16780 1f67dc90cfb27bd039ebb0b34cbf4244 278 SMART SM00382 29 226 9.0E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS16780 1f67dc90cfb27bd039ebb0b34cbf4244 278 SUPERFAMILY SSF52540 4 237 9.91E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16780 1f67dc90cfb27bd039ebb0b34cbf4244 278 Pfam PF00005 ABC transporter 22 177 6.6E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS22075 757c89411c54ddc5dfad61f8c5521e8b 357 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 357 96.785 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APT61_RS22075 757c89411c54ddc5dfad61f8c5521e8b 357 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 1.5E-40 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal APT61_RS22075 757c89411c54ddc5dfad61f8c5521e8b 357 SUPERFAMILY SSF52540 1 343 1.01E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS22075 757c89411c54ddc5dfad61f8c5521e8b 357 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APT61_RS22075 757c89411c54ddc5dfad61f8c5521e8b 357 Gene3D G3DSA:3.40.50.300 230 344 4.9E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS22075 757c89411c54ddc5dfad61f8c5521e8b 357 Gene3D G3DSA:3.40.50.300 1 171 4.9E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS22075 757c89411c54ddc5dfad61f8c5521e8b 357 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 APT61_RS22075 757c89411c54ddc5dfad61f8c5521e8b 357 PANTHER PTHR32182 1 355 2.5E-76 T 22-04-2016 APT61_RS22075 757c89411c54ddc5dfad61f8c5521e8b 357 PANTHER PTHR32182:SF0 1 355 2.5E-76 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APT61_RS22075 757c89411c54ddc5dfad61f8c5521e8b 357 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 1.4E-137 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 4.4E-133 T 22-04-2016 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 6.9E-59 T 22-04-2016 APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 SUPERFAMILY SSF51735 6 252 5.63E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 Gene3D G3DSA:3.40.50.720 6 252 4.4E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 PANTHER PTHR24322:SF402 15 142 2.1E-63 T 22-04-2016 APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 PANTHER PTHR24322:SF402 158 190 2.1E-63 T 22-04-2016 APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.4E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.4E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.4E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.4E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.4E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.4E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.4E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.4E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.4E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 PANTHER PTHR24322 15 142 2.1E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13080 1cd8d9ac7d1d272efb46ab5c25c73358 253 PANTHER PTHR24322 158 190 2.1E-63 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09765 5812285475128515813016a0a73e27c6 168 Pfam PF08534 Redoxin 21 163 1.6E-29 T 22-04-2016 IPR013740 Redoxin GO:0016491 APT61_RS09765 5812285475128515813016a0a73e27c6 168 PANTHER PTHR10681 1 168 3.7E-53 T 22-04-2016 APT61_RS09765 5812285475128515813016a0a73e27c6 168 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 22-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 APT61_RS09765 5812285475128515813016a0a73e27c6 168 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 39.052 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 APT61_RS09765 5812285475128515813016a0a73e27c6 168 Gene3D G3DSA:3.40.30.10 5 168 9.9E-46 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS09765 5812285475128515813016a0a73e27c6 168 SUPERFAMILY SSF52833 4 164 8.02E-44 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS09765 5812285475128515813016a0a73e27c6 168 PANTHER PTHR10681:SF81 1 168 3.7E-53 T 22-04-2016 APT61_RS13305 b517df038b4769299abc10ff34d6bf6e 72 PRINTS PR00050 Cold shock protein signature 43 61 3.7E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS13305 b517df038b4769299abc10ff34d6bf6e 72 PRINTS PR00050 Cold shock protein signature 7 22 3.7E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS13305 b517df038b4769299abc10ff34d6bf6e 72 PRINTS PR00050 Cold shock protein signature 28 37 3.7E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS13305 b517df038b4769299abc10ff34d6bf6e 72 SUPERFAMILY SSF50249 2 69 3.43E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS13305 b517df038b4769299abc10ff34d6bf6e 72 Gene3D G3DSA:2.40.50.140 5 69 3.3E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS13305 b517df038b4769299abc10ff34d6bf6e 72 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 3.5E-27 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS13305 b517df038b4769299abc10ff34d6bf6e 72 PANTHER PTHR11544 1 68 1.2E-31 T 22-04-2016 APT61_RS13305 b517df038b4769299abc10ff34d6bf6e 72 PANTHER PTHR11544:SF65 1 68 1.2E-31 T 22-04-2016 APT61_RS13305 b517df038b4769299abc10ff34d6bf6e 72 PIRSF PIRSF002599 1 72 5.5E-21 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APT61_RS13305 b517df038b4769299abc10ff34d6bf6e 72 SMART SM00357 6 70 2.5E-24 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.5E-33 T 22-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 SUPERFAMILY SSF53187 180 496 6.91E-125 T 22-04-2016 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 PANTHER PTHR11963:SF13 7 503 2.8E-269 T 22-04-2016 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 SUPERFAMILY SSF52949 1 184 4.88E-52 T 22-04-2016 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 Gene3D G3DSA:3.40.630.10 171 496 2.0E-137 T 22-04-2016 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 Gene3D G3DSA:3.40.220.10 1 161 1.4E-66 T 22-04-2016 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 4.1E-119 T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.312 T 22-04-2016 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 PANTHER PTHR11963 7 503 2.8E-269 T 22-04-2016 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 6.0E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 6.0E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 6.0E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 6.0E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 6.0E-54 T 22-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 APT61_RS02590 b28184d218fa3dc85c09f5808dd97a4c 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 22-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 APT61_RS02795 fbe0d6e34669f4bb9f200503b0202246 448 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS02795 fbe0d6e34669f4bb9f200503b0202246 448 PANTHER PTHR11587 1 425 3.8E-180 T 22-04-2016 APT61_RS02795 fbe0d6e34669f4bb9f200503b0202246 448 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 443 75.748 T 22-04-2016 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS02795 fbe0d6e34669f4bb9f200503b0202246 448 Pfam PF00764 Arginosuccinate synthase 16 410 5.1E-58 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS02795 fbe0d6e34669f4bb9f200503b0202246 448 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 22-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS02795 fbe0d6e34669f4bb9f200503b0202246 448 Gene3D G3DSA:1.10.287.400 377 440 3.7E-34 T 22-04-2016 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS02795 fbe0d6e34669f4bb9f200503b0202246 448 Gene3D G3DSA:3.40.50.620 4 174 8.9E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS02795 fbe0d6e34669f4bb9f200503b0202246 448 SUPERFAMILY SSF52402 3 186 3.03E-35 T 22-04-2016 APT61_RS02795 fbe0d6e34669f4bb9f200503b0202246 448 PANTHER PTHR11587:SF2 1 425 3.8E-180 T 22-04-2016 APT61_RS02795 fbe0d6e34669f4bb9f200503b0202246 448 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 1.6E-168 T 22-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS02795 fbe0d6e34669f4bb9f200503b0202246 448 Gene3D G3DSA:3.90.1260.10 175 372 1.0E-64 T 22-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS02795 fbe0d6e34669f4bb9f200503b0202246 448 SUPERFAMILY SSF69864 190 443 7.72E-82 T 22-04-2016 APT61_RS13450 df097122b6c3f25ebb5c395f557beec3 148 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 1 130 3.0E-36 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame APT61_RS13450 df097122b6c3f25ebb5c395f557beec3 148 PANTHER PTHR38452 1 147 3.8E-75 T 22-04-2016 APT61_RS13450 df097122b6c3f25ebb5c395f557beec3 148 PANTHER PTHR38452:SF1 1 147 3.8E-75 T 22-04-2016 APT61_RS13450 df097122b6c3f25ebb5c395f557beec3 148 Pfam PF04284 Protein of unknown function (DUF441) 7 145 2.0E-46 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame APT61_RS13450 df097122b6c3f25ebb5c395f557beec3 148 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 148 18.625 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame APT61_RS03810 ab25c5438b2ea7dd9525658df904f3a8 228 PANTHER PTHR30632:SF6 1 171 2.2E-68 T 22-04-2016 APT61_RS03810 ab25c5438b2ea7dd9525658df904f3a8 228 Gene3D G3DSA:3.40.190.10 1 115 8.6E-16 T 22-04-2016 APT61_RS03810 ab25c5438b2ea7dd9525658df904f3a8 228 SUPERFAMILY SSF53850 2 172 1.81E-20 T 22-04-2016 APT61_RS03810 ab25c5438b2ea7dd9525658df904f3a8 228 PANTHER PTHR30632 1 171 2.2E-68 T 22-04-2016 APT61_RS03810 ab25c5438b2ea7dd9525658df904f3a8 228 Pfam PF13531 Bacterial extracellular solute-binding protein 2 175 1.5E-24 T 22-04-2016 APT61_RS00975 c36df067b1ba9fa213adcb826503ada5 235 PANTHER PTHR38765 3 235 2.3E-87 T 22-04-2016 APT61_RS00975 c36df067b1ba9fa213adcb826503ada5 235 Pfam PF04340 Protein of unknown function, DUF484 11 232 3.7E-81 T 22-04-2016 IPR007435 Protein of unknown function DUF484 APT61_RS11135 8312d8fa02d8a6538cf55e7784622dc4 329 SUPERFAMILY SSF51679 2 328 2.36E-62 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS11135 8312d8fa02d8a6538cf55e7784622dc4 329 PANTHER PTHR30137:SF2 2 328 6.3E-58 T 22-04-2016 APT61_RS11135 8312d8fa02d8a6538cf55e7784622dc4 329 Gene3D G3DSA:3.20.20.30 5 328 6.8E-67 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS11135 8312d8fa02d8a6538cf55e7784622dc4 329 PANTHER PTHR30137 2 328 6.3E-58 T 22-04-2016 APT61_RS11135 8312d8fa02d8a6538cf55e7784622dc4 329 TIGRFAM TIGR04027 LLM_KPN_01858: putative FMN-dependent luciferase-like monooxygenase, KPN_01858 family 4 328 4.0E-163 T 22-04-2016 IPR024003 Putative luciferase-like monooxygenase, KPN01858 APT61_RS11135 8312d8fa02d8a6538cf55e7784622dc4 329 Pfam PF00296 Luciferase-like monooxygenase 16 266 3.9E-40 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS13540 e8a1afc8732e0d5749f6c31023ebf364 393 SUPERFAMILY SSF54975 1 133 1.28E-30 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APT61_RS13540 e8a1afc8732e0d5749f6c31023ebf364 393 Pfam PF04940 Sensors of blue-light using FAD 2 92 4.1E-21 T 22-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 APT61_RS13540 e8a1afc8732e0d5749f6c31023ebf364 393 SMART SM01034 2 94 3.1E-32 T 22-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 APT61_RS13540 e8a1afc8732e0d5749f6c31023ebf364 393 SUPERFAMILY SSF141868 215 373 3.14E-32 T 22-04-2016 IPR001633 EAL domain APT61_RS13540 e8a1afc8732e0d5749f6c31023ebf364 393 PANTHER PTHR33121 1 373 8.3E-97 T 22-04-2016 APT61_RS13540 e8a1afc8732e0d5749f6c31023ebf364 393 Pfam PF00563 EAL domain 213 373 1.9E-33 T 22-04-2016 IPR001633 EAL domain APT61_RS13540 e8a1afc8732e0d5749f6c31023ebf364 393 Gene3D G3DSA:3.20.20.450 203 373 5.1E-31 T 22-04-2016 IPR001633 EAL domain APT61_RS13540 e8a1afc8732e0d5749f6c31023ebf364 393 SMART SM00052 155 376 2.3E-12 T 22-04-2016 IPR001633 EAL domain APT61_RS13540 e8a1afc8732e0d5749f6c31023ebf364 393 PANTHER PTHR33121:SF15 1 373 8.3E-97 T 22-04-2016 APT61_RS15815 8188541b2d66880e8656067dfba0007f 170 SMART SM00852 14 158 3.5E-29 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS15815 8188541b2d66880e8656067dfba0007f 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 153 1.3E-37 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS15815 8188541b2d66880e8656067dfba0007f 170 SUPERFAMILY SSF53218 8 168 2.62E-46 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS15815 8188541b2d66880e8656067dfba0007f 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 APT61_RS15815 8188541b2d66880e8656067dfba0007f 170 PANTHER PTHR10192 5 170 1.4E-91 T 22-04-2016 APT61_RS15815 8188541b2d66880e8656067dfba0007f 170 Gene3D G3DSA:3.40.980.10 8 169 3.3E-50 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS15815 8188541b2d66880e8656067dfba0007f 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.1E-32 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS15815 8188541b2d66880e8656067dfba0007f 170 PANTHER PTHR10192:SF18 5 170 1.4E-91 T 22-04-2016 APT61_RS15815 8188541b2d66880e8656067dfba0007f 170 PIRSF PIRSF006443 1 166 2.9E-61 T 22-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 APT61_RS15815 8188541b2d66880e8656067dfba0007f 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 169 6.2E-82 T 22-04-2016 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 UniPathway: UPA00344 APT61_RS19090 2ea47b75f9142ebc73453df11791a04c 215 SMART SM00855 3 157 2.6E-24 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APT61_RS19090 2ea47b75f9142ebc73453df11791a04c 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 193 1.2E-56 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APT61_RS19090 2ea47b75f9142ebc73453df11791a04c 215 PANTHER PTHR23029 1 215 2.7E-146 T 22-04-2016 APT61_RS19090 2ea47b75f9142ebc73453df11791a04c 215 PANTHER PTHR23029:SF53 1 215 2.7E-146 T 22-04-2016 APT61_RS19090 2ea47b75f9142ebc73453df11791a04c 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 57.715 T 22-04-2016 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 UniPathway: UPA00109 APT61_RS19090 2ea47b75f9142ebc73453df11791a04c 215 Gene3D G3DSA:3.40.50.1240 2 209 3.9E-60 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APT61_RS19090 2ea47b75f9142ebc73453df11791a04c 215 SUPERFAMILY SSF53254 1 208 9.3E-57 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APT61_RS19090 2ea47b75f9142ebc73453df11791a04c 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 APT61_RS20560 582edeca54794799f822b84a31bea48d 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 3.4E-133 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 APT61_RS20560 582edeca54794799f822b84a31bea48d 338 Gene3D G3DSA:3.90.25.10 264 337 1.9E-51 T 22-04-2016 APT61_RS20560 582edeca54794799f822b84a31bea48d 338 Gene3D G3DSA:3.90.25.10 180 232 1.9E-51 T 22-04-2016 APT61_RS20560 582edeca54794799f822b84a31bea48d 338 SUPERFAMILY SSF51735 1 335 1.97E-97 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS20560 582edeca54794799f822b84a31bea48d 338 PANTHER PTHR10366 2 336 1.2E-142 T 22-04-2016 APT61_RS20560 582edeca54794799f822b84a31bea48d 338 Gene3D G3DSA:3.40.50.720 1 179 5.2E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS20560 582edeca54794799f822b84a31bea48d 338 PANTHER PTHR10366:SF39 2 336 1.2E-142 T 22-04-2016 APT61_RS20560 582edeca54794799f822b84a31bea48d 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 324 1.0E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 Gene3D G3DSA:3.40.50.150 102 310 5.6E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 468 1.3E-10 T 22-04-2016 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 188 199 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 41 310 8.5E-110 T 22-04-2016 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 6 473 63.704 T 22-04-2016 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 SUPERFAMILY SSF53335 8 310 4.38E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 PANTHER PTHR22807:SF38 6 369 4.3E-233 T 22-04-2016 APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 122 132 2.5E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 91 105 2.5E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 293 310 2.5E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 189 201 2.5E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 239 255 2.5E-28 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 Pfam PF01189 16S rRNA methyltransferase RsmB/F 118 309 2.2E-45 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 PANTHER PTHR22807 6 369 4.3E-233 T 22-04-2016 APT61_RS08705 c4490bdd31306da1d0f79e297d524d2c 480 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 8 105 5.6E-29 T 22-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS16650 a6c7f0c67df3dffc6021f4f11f05ffdd 329 Gene3D G3DSA:1.10.3470.10 5 328 3.9E-91 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS16650 a6c7f0c67df3dffc6021f4f11f05ffdd 329 Pfam PF01032 FecCD transport family 19 323 1.1E-84 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS16650 a6c7f0c67df3dffc6021f4f11f05ffdd 329 PANTHER PTHR30472 1 329 4.4E-162 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS16650 a6c7f0c67df3dffc6021f4f11f05ffdd 329 PANTHER PTHR30472:SF24 1 329 4.4E-162 T 22-04-2016 APT61_RS16650 a6c7f0c67df3dffc6021f4f11f05ffdd 329 SUPERFAMILY SSF81345 4 324 1.1E-72 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS05490 df9e994f400e314e79f079061eee0fa7 82 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 1 78 2.7E-33 T 22-04-2016 IPR009320 YagB/YeeU/YfjZ APT61_RS05490 df9e994f400e314e79f079061eee0fa7 82 SUPERFAMILY SSF143737 1 79 1.2E-34 T 22-04-2016 APT61_RS05490 df9e994f400e314e79f079061eee0fa7 82 Gene3D G3DSA:3.30.450.20 1 80 9.7E-38 T 22-04-2016 APT61_RS07200 09e159217020dc6ffd191b3ac9bffeda 565 Pfam PF02378 Phosphotransferase system, EIIC 234 497 5.2E-18 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS07200 09e159217020dc6ffd191b3ac9bffeda 565 PANTHER PTHR30505:SF0 23 560 1.0E-270 T 22-04-2016 APT61_RS07200 09e159217020dc6ffd191b3ac9bffeda 565 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 109 195 1.4E-18 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS07200 09e159217020dc6ffd191b3ac9bffeda 565 PANTHER PTHR30505 23 560 1.0E-270 T 22-04-2016 APT61_RS07200 09e159217020dc6ffd191b3ac9bffeda 565 SUPERFAMILY SSF52794 4 87 4.97E-8 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS07200 09e159217020dc6ffd191b3ac9bffeda 565 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 108 191 7.2E-40 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 APT61_RS07200 09e159217020dc6ffd191b3ac9bffeda 565 SUPERFAMILY SSF52794 106 205 1.17E-34 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS07200 09e159217020dc6ffd191b3ac9bffeda 565 Gene3D G3DSA:3.40.50.2300 103 206 7.7E-42 T 22-04-2016 APT61_RS07200 09e159217020dc6ffd191b3ac9bffeda 565 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 218 553 6.7E-149 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 PANTHER PTHR37469 93 1873 0.0 T 22-04-2016 APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 PANTHER PTHR37469 1889 2860 0.0 T 22-04-2016 APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 Gene3D G3DSA:2.70.98.40 1575 1867 2.5E-93 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 Gene3D G3DSA:2.70.98.40 2068 2392 1.6E-91 T 22-04-2016 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 2363 2789 4.4E-120 T 22-04-2016 IPR033432 Glycosyl hydrolase 36, catalytic domain APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 SMART SM01068 2068 2133 1.1E-32 T 22-04-2016 IPR009342 Putative carbohydrate binding domain APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 SMART SM01068 1560 1621 1.4E-18 T 22-04-2016 IPR009342 Putative carbohydrate binding domain APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 SUPERFAMILY SSF48208 2340 2858 6.26E-93 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 Pfam PF06165 Glycosyltransferase family 36 1582 1833 2.6E-76 T 22-04-2016 IPR010383 Glycosyl hydrolase 94 APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 Pfam PF06165 Glycosyltransferase family 36 2091 2332 2.6E-79 T 22-04-2016 IPR010383 Glycosyl hydrolase 94 APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 Gene3D G3DSA:3.90.1200.10 144 190 2.2E-4 T 22-04-2016 APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 Pfam PF10091 Putative glucoamylase 1322 1513 1.1E-12 T 22-04-2016 IPR019282 Domain of unknown function DUF2329 APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 PANTHER PTHR37469:SF2 93 1873 0.0 T 22-04-2016 APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 PANTHER PTHR37469:SF2 1889 2860 0.0 T 22-04-2016 APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 SUPERFAMILY SSF74650 1579 1835 1.82E-75 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APT61_RS13315 8d8bc22d8f366c9f9c63b8b0aa81067f 2860 SUPERFAMILY SSF74650 2068 2335 2.7E-83 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APT61_RS07885 e934e45c7968398a1d22ca71d65d8b1e 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 262 4.3E-96 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APT61_RS07885 e934e45c7968398a1d22ca71d65d8b1e 388 Gene3D G3DSA:3.40.710.10 28 282 7.3E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS07885 e934e45c7968398a1d22ca71d65d8b1e 388 PANTHER PTHR21581:SF5 1 387 3.9E-300 T 22-04-2016 APT61_RS07885 e934e45c7968398a1d22ca71d65d8b1e 388 SUPERFAMILY SSF56601 5 282 3.03E-76 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS07885 e934e45c7968398a1d22ca71d65d8b1e 388 Gene3D G3DSA:2.60.410.10 283 373 4.4E-27 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS07885 e934e45c7968398a1d22ca71d65d8b1e 388 SMART SM00936 282 373 2.1E-29 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS07885 e934e45c7968398a1d22ca71d65d8b1e 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 1.7E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APT61_RS07885 e934e45c7968398a1d22ca71d65d8b1e 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 121 138 1.7E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APT61_RS07885 e934e45c7968398a1d22ca71d65d8b1e 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 148 161 1.7E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APT61_RS07885 e934e45c7968398a1d22ca71d65d8b1e 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 282 373 4.2E-21 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS07885 e934e45c7968398a1d22ca71d65d8b1e 388 SUPERFAMILY SSF69189 282 375 2.55E-23 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS07885 e934e45c7968398a1d22ca71d65d8b1e 388 PANTHER PTHR21581 1 387 3.9E-300 T 22-04-2016 APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 SUPERFAMILY SSF51735 4 243 2.91E-87 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 PANTHER PTHR24322 151 183 4.7E-80 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 PANTHER PTHR24322 10 135 4.7E-80 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.6E-101 T 22-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 Gene3D G3DSA:3.40.50.720 2 243 1.4E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 6.2E-68 T 22-04-2016 APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.3E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.3E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.3E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 4.3E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.3E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 4.3E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 PANTHER PTHR24322:SF635 151 183 4.7E-80 T 22-04-2016 APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 PANTHER PTHR24322:SF635 10 135 4.7E-80 T 22-04-2016 APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.2E-15 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS13985 464da795ac43fd96a3d8e1924c9c1579 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 4.1E-6 T 22-04-2016 APT61_RS06005 db9250c8c1895645cbe909444df2e58c 388 SUPERFAMILY SSF102114 120 338 6.54E-13 T 22-04-2016 APT61_RS06005 db9250c8c1895645cbe909444df2e58c 388 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 18 373 9.5E-176 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS06005 db9250c8c1895645cbe909444df2e58c 388 Pfam PF04055 Radical SAM superfamily 124 295 2.3E-15 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS06005 db9250c8c1895645cbe909444df2e58c 388 Gene3D G3DSA:3.20.20.70 121 328 8.7E-15 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS06005 db9250c8c1895645cbe909444df2e58c 388 PANTHER PTHR30544:SF5 7 386 7.6E-210 T 22-04-2016 APT61_RS06005 db9250c8c1895645cbe909444df2e58c 388 PANTHER PTHR30544 7 386 7.6E-210 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS06005 db9250c8c1895645cbe909444df2e58c 388 PIRSF PIRSF006004 15 382 6.2E-147 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS06005 db9250c8c1895645cbe909444df2e58c 388 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 21 368 74.647 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 SUPERFAMILY SSF53720 15 421 2.16E-67 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 PRINTS PR00083 Histidinol dehydrogenase signature 221 242 7.5E-64 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 PRINTS PR00083 Histidinol dehydrogenase signature 312 337 7.5E-64 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 PRINTS PR00083 Histidinol dehydrogenase signature 192 217 7.5E-64 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 PRINTS PR00083 Histidinol dehydrogenase signature 353 371 7.5E-64 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 PRINTS PR00083 Histidinol dehydrogenase signature 243 262 7.5E-64 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 PRINTS PR00083 Histidinol dehydrogenase signature 100 127 7.5E-64 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 PRINTS PR00083 Histidinol dehydrogenase signature 162 188 7.5E-64 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 PRINTS PR00083 Histidinol dehydrogenase signature 25 49 7.5E-64 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 25 419 3.1E-129 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 PANTHER PTHR21256:SF11 11 426 5.3E-171 T 22-04-2016 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 Gene3D G3DSA:3.40.50.1980 19 215 1.1E-64 T 22-04-2016 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 PIRSF PIRSF000099 3 423 4.0E-113 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 Gene3D G3DSA:3.40.50.1980 216 364 5.5E-55 T 22-04-2016 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 Pfam PF00815 Histidinol dehydrogenase 14 420 2.3E-134 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 221 253 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 PANTHER PTHR21256 11 426 5.3E-171 T 22-04-2016 APT61_RS12800 a34d512f26bc07cf3774a73c76be49b1 440 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 420 31.254 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 PANTHER PTHR24423:SF554 1 430 5.5E-187 T 22-04-2016 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 SMART SM00387 313 425 2.3E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 SUPERFAMILY SSF55874 259 423 3.67E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 1.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 1.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 1.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 1.5E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 Gene3D G3DSA:3.30.450.20 99 194 1.2E-8 T 22-04-2016 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 SMART SM00388 203 269 8.9E-24 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 1.3E-28 T 22-04-2016 IPR021766 Protein of unknown function DUF3329 GO:0004673 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 5.1E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 PANTHER PTHR24423 1 430 5.5E-187 T 22-04-2016 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 SMART SM00091 98 164 1.7E-5 T 22-04-2016 IPR000014 PAS domain APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 Gene3D G3DSA:1.10.287.130 195 254 6.4E-23 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 Pfam PF00989 PAS fold 99 194 1.9E-7 T 22-04-2016 IPR013767 PAS fold GO:0006355 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 SUPERFAMILY SSF55785 87 195 1.19E-9 T 22-04-2016 IPR000014 PAS domain APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 421 1.3E-132 T 22-04-2016 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 SUPERFAMILY SSF47384 190 268 1.8E-20 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 424 2.0E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS17510 00e19a1f9f02bbd8436e25242a23798a 431 Gene3D G3DSA:3.30.565.10 255 422 2.6E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS02115 0751609884d34c94162d6c029a6ac37b 104 SMART SM00739 4 31 9.8E-4 T 22-04-2016 IPR005824 KOW APT61_RS02115 0751609884d34c94162d6c029a6ac37b 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 9.6E-39 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02115 0751609884d34c94162d6c029a6ac37b 104 SUPERFAMILY SSF50104 4 100 1.68E-32 T 22-04-2016 IPR008991 Translation protein SH3-like domain APT61_RS02115 0751609884d34c94162d6c029a6ac37b 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 1.6E-23 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02115 0751609884d34c94162d6c029a6ac37b 104 Gene3D G3DSA:2.30.30.30 3 92 1.7E-21 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 APT61_RS02115 0751609884d34c94162d6c029a6ac37b 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.797 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02115 0751609884d34c94162d6c029a6ac37b 104 PANTHER PTHR12903 4 103 2.2E-48 T 22-04-2016 APT61_RS02115 0751609884d34c94162d6c029a6ac37b 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 22-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS06030 46135a2c62cf6aa83afa3e9d30c7b4fc 392 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 392 40.713 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB APT61_RS06030 46135a2c62cf6aa83afa3e9d30c7b4fc 392 Gene3D G3DSA:2.140.10.10 1 391 1.6E-79 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APT61_RS06030 46135a2c62cf6aa83afa3e9d30c7b4fc 392 Pfam PF13360 PQQ-like domain 78 319 1.0E-54 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS06030 46135a2c62cf6aa83afa3e9d30c7b4fc 392 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 390 6.6E-135 T 22-04-2016 IPR017687 Outer membrane protein assembly factor BamB APT61_RS06030 46135a2c62cf6aa83afa3e9d30c7b4fc 392 SUPERFAMILY SSF50998 27 386 4.89E-80 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APT61_RS06030 46135a2c62cf6aa83afa3e9d30c7b4fc 392 PANTHER PTHR32303 1 392 1.9E-200 T 22-04-2016 APT61_RS06030 46135a2c62cf6aa83afa3e9d30c7b4fc 392 PANTHER PTHR32303:SF8 1 392 1.9E-200 T 22-04-2016 APT61_RS06030 46135a2c62cf6aa83afa3e9d30c7b4fc 392 SMART SM00564 114 146 2.1E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS06030 46135a2c62cf6aa83afa3e9d30c7b4fc 392 SMART SM00564 329 361 0.097 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS06030 46135a2c62cf6aa83afa3e9d30c7b4fc 392 SMART SM00564 64 96 1.8E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS06030 46135a2c62cf6aa83afa3e9d30c7b4fc 392 SMART SM00564 155 186 6.9E-5 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS06030 46135a2c62cf6aa83afa3e9d30c7b4fc 392 SMART SM00564 251 282 8.2E-4 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS06030 46135a2c62cf6aa83afa3e9d30c7b4fc 392 SMART SM00564 200 231 350.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS06030 46135a2c62cf6aa83afa3e9d30c7b4fc 392 SMART SM00564 289 320 78.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS09305 4dad32600e368c379252a96becdb8b02 236 SUPERFAMILY SSF89155 5 163 3.77E-32 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APT61_RS09305 4dad32600e368c379252a96becdb8b02 236 PANTHER PTHR30598 1 216 1.8E-85 T 22-04-2016 APT61_RS09305 4dad32600e368c379252a96becdb8b02 236 Pfam PF02613 Nitrate reductase delta subunit 46 155 9.7E-13 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APT61_RS09305 4dad32600e368c379252a96becdb8b02 236 PANTHER PTHR30598:SF1 1 216 1.8E-85 T 22-04-2016 APT61_RS09305 4dad32600e368c379252a96becdb8b02 236 Gene3D G3DSA:1.10.3480.10 10 127 1.3E-7 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APT61_RS09305 4dad32600e368c379252a96becdb8b02 236 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 2.4E-52 T 22-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 APT61_RS04545 4e11ad3682e87c88bb88d20e65dc7e4f 455 SUPERFAMILY SSF143548 16 158 4.45E-45 T 22-04-2016 IPR029009 Allosteric substrate binding domain APT61_RS04545 4e11ad3682e87c88bb88d20e65dc7e4f 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.4E-220 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APT61_RS04545 4e11ad3682e87c88bb88d20e65dc7e4f 455 Gene3D G3DSA:3.30.1330.90 10 158 5.3E-54 T 22-04-2016 IPR029009 Allosteric substrate binding domain APT61_RS04545 4e11ad3682e87c88bb88d20e65dc7e4f 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 2.5E-95 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit APT61_RS04545 4e11ad3682e87c88bb88d20e65dc7e4f 455 PANTHER PTHR30182:SF5 1 452 0.0 T 22-04-2016 APT61_RS04545 4e11ad3682e87c88bb88d20e65dc7e4f 455 PANTHER PTHR30182 1 452 0.0 T 22-04-2016 APT61_RS04545 4e11ad3682e87c88bb88d20e65dc7e4f 455 Pfam PF03315 Serine dehydratase beta chain 3 155 1.5E-55 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 Gene3D G3DSA:1.10.150.20 410 465 1.1E-4 T 22-04-2016 APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 Gene3D G3DSA:1.10.287.610 24 68 2.5E-7 T 22-04-2016 APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 310 383 1.1E-20 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 Hamap MF_01587 DNA ligase B [ligB]. 1 556 51.701 T 22-04-2016 IPR020923 DNA ligase B GO:0003911|GO:0006259 APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 SUPERFAMILY SSF50249 308 386 3.94E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 PIRSF PIRSF001604 22 554 6.4E-66 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 Gene3D G3DSA:1.10.150.20 479 554 1.6E-6 T 22-04-2016 APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 SUPERFAMILY SSF56091 23 303 2.16E-66 T 22-04-2016 APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 PANTHER PTHR23389 1 521 1.0E-206 T 22-04-2016 APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 SUPERFAMILY SSF47781 398 554 2.86E-26 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 Gene3D G3DSA:3.30.470.30 126 242 5.4E-21 T 22-04-2016 APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 122 151 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 SMART SM00532 27 423 1.5E-89 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 27 288 7.9E-29 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 Gene3D G3DSA:2.40.50.140 309 379 2.6E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS21730 a82ac68a7094a02033fb0d120405659d 556 PANTHER PTHR23389:SF7 1 521 1.0E-206 T 22-04-2016 APT61_RS05035 049844e5f3a1ccecdea7b7f27f65461e 534 Gene3D G3DSA:3.40.50.300 1 291 2.2E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05035 049844e5f3a1ccecdea7b7f27f65461e 534 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 30 286 5.6E-22 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS05035 049844e5f3a1ccecdea7b7f27f65461e 534 SUPERFAMILY SSF52540 1 291 1.71E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15365 db028025873ab05dfa959f190b39cbce 178 PANTHER PTHR31899 9 164 1.6E-36 T 22-04-2016 APT61_RS15365 db028025873ab05dfa959f190b39cbce 178 Pfam PF04116 Fatty acid hydroxylase superfamily 11 136 5.1E-9 T 22-04-2016 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0006633|GO:0016491|GO:0055114 APT61_RS20315 4edb580f0854e6d195ff5cb4d663aeec 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 1.1E-35 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type APT61_RS20315 4edb580f0854e6d195ff5cb4d663aeec 141 SUPERFAMILY SSF46785 2 131 1.36E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20315 4edb580f0854e6d195ff5cb4d663aeec 141 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 22-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site APT61_RS20315 4edb580f0854e6d195ff5cb4d663aeec 141 PANTHER PTHR33221 2 141 6.9E-81 T 22-04-2016 APT61_RS20315 4edb580f0854e6d195ff5cb4d663aeec 141 Gene3D G3DSA:1.10.10.10 2 133 2.7E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20315 4edb580f0854e6d195ff5cb4d663aeec 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.745 T 22-04-2016 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 APT61_RS20315 4edb580f0854e6d195ff5cb4d663aeec 141 PANTHER PTHR33221:SF4 2 141 6.9E-81 T 22-04-2016 APT61_RS20315 4edb580f0854e6d195ff5cb4d663aeec 141 Pfam PF02082 Transcriptional regulator 2 82 1.6E-24 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type APT61_RS09040 1a7d4e2a9b119c6e3e5bc6e8a5bb8888 420 PANTHER PTHR23508 2 417 2.8E-153 T 22-04-2016 APT61_RS09040 1a7d4e2a9b119c6e3e5bc6e8a5bb8888 420 SUPERFAMILY SSF103473 2 410 3.27E-59 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS09040 1a7d4e2a9b119c6e3e5bc6e8a5bb8888 420 Gene3D G3DSA:1.20.1250.20 229 414 4.4E-20 T 22-04-2016 APT61_RS09040 1a7d4e2a9b119c6e3e5bc6e8a5bb8888 420 Gene3D G3DSA:1.20.1250.20 4 216 2.6E-20 T 22-04-2016 APT61_RS09040 1a7d4e2a9b119c6e3e5bc6e8a5bb8888 420 Pfam PF07690 Major Facilitator Superfamily 48 359 1.5E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS09040 1a7d4e2a9b119c6e3e5bc6e8a5bb8888 420 PANTHER PTHR23508:SF1 2 417 2.8E-153 T 22-04-2016 APT61_RS14595 6397197d0b1368e6a00b8febd5bc9881 420 Pfam PF03611 PTS system sugar-specific permease component 9 404 3.5E-144 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 APT61_RS14595 6397197d0b1368e6a00b8febd5bc9881 420 PANTHER PTHR33843:SF4 1 418 1.5E-215 T 22-04-2016 APT61_RS14595 6397197d0b1368e6a00b8febd5bc9881 420 PANTHER PTHR33843 1 418 1.5E-215 T 22-04-2016 APT61_RS15795 d535fa354cae200c7da2d618b5770381 235 PANTHER PTHR23291:SF42 1 235 5.5E-93 T 22-04-2016 APT61_RS15795 d535fa354cae200c7da2d618b5770381 235 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 231 2.3E-57 T 22-04-2016 APT61_RS15795 d535fa354cae200c7da2d618b5770381 235 PANTHER PTHR23291 1 235 5.5E-93 T 22-04-2016 IPR006214 Bax inhibitor 1-related APT61_RS11170 8987eba243372e93e74a29d0c854adbb 336 Gene3D G3DSA:3.40.50.720 166 282 6.0E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11170 8987eba243372e93e74a29d0c854adbb 336 PANTHER PTHR11695 12 335 6.8E-147 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS11170 8987eba243372e93e74a29d0c854adbb 336 SUPERFAMILY SSF50129 1 169 4.72E-48 T 22-04-2016 IPR011032 GroES-like APT61_RS11170 8987eba243372e93e74a29d0c854adbb 336 Gene3D G3DSA:3.90.180.10 1 165 2.7E-60 T 22-04-2016 IPR011032 GroES-like APT61_RS11170 8987eba243372e93e74a29d0c854adbb 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APT61_RS11170 8987eba243372e93e74a29d0c854adbb 336 SMART SM00829 8 332 1.5E-7 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APT61_RS11170 8987eba243372e93e74a29d0c854adbb 336 Pfam PF00107 Zinc-binding dehydrogenase 172 298 5.0E-28 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APT61_RS11170 8987eba243372e93e74a29d0c854adbb 336 PANTHER PTHR11695:SF498 12 335 6.8E-147 T 22-04-2016 APT61_RS11170 8987eba243372e93e74a29d0c854adbb 336 SUPERFAMILY SSF51735 136 302 1.02E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11170 8987eba243372e93e74a29d0c854adbb 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 1.7E-29 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APT61_RS08115 918e1eb749e348eb427addad8c00496c 264 Gene3D G3DSA:3.40.50.150 49 233 8.3E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS08115 918e1eb749e348eb427addad8c00496c 264 Pfam PF05050 Methyltransferase FkbM domain 55 227 9.2E-13 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APT61_RS08115 918e1eb749e348eb427addad8c00496c 264 PANTHER PTHR34203 49 232 4.5E-14 T 22-04-2016 APT61_RS08115 918e1eb749e348eb427addad8c00496c 264 SUPERFAMILY SSF53335 23 234 3.17E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS08115 918e1eb749e348eb427addad8c00496c 264 PANTHER PTHR34203:SF2 49 232 4.5E-14 T 22-04-2016 APT61_RS08115 918e1eb749e348eb427addad8c00496c 264 TIGRFAM TIGR01444 fkbM_fam: methyltransferase, FkbM family 52 190 9.0E-27 T 22-04-2016 IPR006342 Methyltransferase FkbM KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APT61_RS20580 1993cb6184be8a52cc2af73ea56c0db4 331 PANTHER PTHR22916 1 291 1.5E-27 T 22-04-2016 APT61_RS20580 1993cb6184be8a52cc2af73ea56c0db4 331 Gene3D G3DSA:3.90.550.10 4 201 2.3E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS20580 1993cb6184be8a52cc2af73ea56c0db4 331 Pfam PF00535 Glycosyl transferase family 2 8 135 1.6E-14 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APT61_RS20580 1993cb6184be8a52cc2af73ea56c0db4 331 SUPERFAMILY SSF53448 2 220 1.09E-37 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 Gene3D G3DSA:3.30.1480.10 1 124 8.5E-46 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 Pfam PF08529 NusA N-terminal domain 4 123 1.5E-36 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 1.5E-18 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 2.7E-20 T 22-04-2016 IPR010214 Transcription termination factor NusA, C-terminal duplication APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 Gene3D G3DSA:3.30.300.20 278 346 5.3E-26 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 SUPERFAMILY SSF47794 355 415 5.81E-17 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 SUPERFAMILY SSF54814 201 278 3.73E-29 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 SUPERFAMILY SSF69705 1 126 5.89E-41 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 2.4E-130 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 Gene3D G3DSA:1.10.150.20 428 493 4.0E-25 T 22-04-2016 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 Gene3D G3DSA:2.40.50.140 128 197 1.7E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 Gene3D G3DSA:3.30.300.20 199 277 2.4E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.172 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 PANTHER PTHR22648 1 448 1.3E-189 T 22-04-2016 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 Pfam PF13184 NusA-like KH domain 230 297 2.1E-27 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 SUPERFAMILY SSF50249 132 199 2.18E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 SUPERFAMILY SSF54814 279 343 3.18E-15 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 Gene3D G3DSA:1.10.150.20 357 414 5.7E-23 T 22-04-2016 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 SMART SM00316 133 200 1.1E-8 T 22-04-2016 IPR022967 RNA-binding domain, S1 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 1.4E-9 T 22-04-2016 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 SUPERFAMILY SSF47794 429 492 3.45E-18 T 22-04-2016 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 APT61_RS02810 b2a9b0c732670a5a9b4b4aa96d475a50 495 PANTHER PTHR22648:SF0 1 448 1.3E-189 T 22-04-2016 APT61_RS05470 159f90fc9918dac3961b72e73514d2e9 284 Pfam PF01163 RIO1 family 31 223 1.9E-42 T 22-04-2016 APT61_RS05470 159f90fc9918dac3961b72e73514d2e9 284 PANTHER PTHR10593:SF19 5 278 6.0E-130 T 22-04-2016 APT61_RS05470 159f90fc9918dac3961b72e73514d2e9 284 SUPERFAMILY SSF56112 19 212 4.01E-20 T 22-04-2016 IPR011009 Protein kinase-like domain APT61_RS05470 159f90fc9918dac3961b72e73514d2e9 284 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 22-04-2016 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 APT61_RS05470 159f90fc9918dac3961b72e73514d2e9 284 SMART SM00090 7 234 2.1E-16 T 22-04-2016 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 APT61_RS05470 159f90fc9918dac3961b72e73514d2e9 284 PANTHER PTHR10593 5 278 6.0E-130 T 22-04-2016 APT61_RS05470 159f90fc9918dac3961b72e73514d2e9 284 Gene3D G3DSA:3.30.200.20 17 125 3.8E-12 T 22-04-2016 APT61_RS05470 159f90fc9918dac3961b72e73514d2e9 284 Gene3D G3DSA:1.10.510.10 139 218 9.4E-19 T 22-04-2016 APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 PANTHER PTHR32282:SF5 421 612 3.1E-286 T 22-04-2016 APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 PANTHER PTHR32282:SF5 767 839 3.1E-286 T 22-04-2016 APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 SUPERFAMILY SSF53955 43 256 1.8E-79 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 PANTHER PTHR32282:SF5 672 751 3.1E-286 T 22-04-2016 APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 PANTHER PTHR32282 2 310 3.1E-286 T 22-04-2016 APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 PANTHER PTHR32282 672 751 3.1E-286 T 22-04-2016 APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 SUPERFAMILY SSF56601 422 610 4.81E-109 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 SUPERFAMILY SSF56601 211 233 4.81E-109 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 SUPERFAMILY SSF56601 672 832 4.81E-109 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 SUPERFAMILY SSF56601 262 313 4.81E-109 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 PANTHER PTHR32282 421 612 3.1E-286 T 22-04-2016 APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 PANTHER PTHR32282 767 839 3.1E-286 T 22-04-2016 APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 Gene3D G3DSA:2.40.50.140 347 421 2.7E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 Gene3D G3DSA:3.40.710.10 422 613 5.3E-129 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 Gene3D G3DSA:3.40.710.10 232 313 5.3E-129 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 Gene3D G3DSA:3.40.710.10 673 831 5.3E-129 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 65 783 1.3E-171 T 22-04-2016 APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 Pfam PF17092 Penicillin-binding protein OB-like domain 316 425 8.6E-29 T 22-04-2016 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00230+2.4.2.-|KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00514+2.4.2.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.-|UniPathway: UPA00219 APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 Gene3D G3DSA:1.10.3810.10 55 231 5.5E-75 T 22-04-2016 APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 PANTHER PTHR32282:SF5 2 310 3.1E-286 T 22-04-2016 APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 Pfam PF00905 Penicillin binding protein transpeptidase domain 429 733 1.7E-23 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APT61_RS01775 ef4977b0f5127fa56bcf110184b00091 850 Pfam PF00912 Transglycosylase 55 229 2.1E-64 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.4E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.4E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.4E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 Gene3D G3DSA:3.40.50.720 2 227 2.4E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 4.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 4.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 4.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 4.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 4.3E-20 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 SUPERFAMILY SSF51735 2 230 2.97E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 Pfam PF00106 short chain dehydrogenase 2 187 1.0E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 PANTHER PTHR24322:SF392 5 131 2.9E-92 T 22-04-2016 APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 PANTHER PTHR24322:SF392 147 179 2.9E-92 T 22-04-2016 APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 PANTHER PTHR24322 5 131 2.9E-92 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11685 4a6c612550d77b9854e646905ebaef7f 248 PANTHER PTHR24322 147 179 2.9E-92 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS15545 6de617923b08ccf70ec8236a9bbcbd0f 512 Gene3D G3DSA:3.40.190.10 130 280 2.1E-51 T 22-04-2016 APT61_RS15545 6de617923b08ccf70ec8236a9bbcbd0f 512 PIRSF PIRSF002741 9 512 4.0E-109 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APT61_RS15545 6de617923b08ccf70ec8236a9bbcbd0f 512 PANTHER PTHR30290:SF32 13 512 0.0 T 22-04-2016 APT61_RS15545 6de617923b08ccf70ec8236a9bbcbd0f 512 PANTHER PTHR30290 13 512 0.0 T 22-04-2016 APT61_RS15545 6de617923b08ccf70ec8236a9bbcbd0f 512 SUPERFAMILY SSF53850 30 511 1.31E-144 T 22-04-2016 APT61_RS15545 6de617923b08ccf70ec8236a9bbcbd0f 512 Gene3D G3DSA:3.10.105.10 281 481 8.8E-62 T 22-04-2016 APT61_RS15545 6de617923b08ccf70ec8236a9bbcbd0f 512 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 429 4.6E-100 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS17135 fa4aefd42c74cf95aad343ad7f6044bd 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 38.464 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 APT61_RS17135 fa4aefd42c74cf95aad343ad7f6044bd 183 PANTHER PTHR11776:SF0 6 183 2.7E-84 T 22-04-2016 APT61_RS17135 fa4aefd42c74cf95aad343ad7f6044bd 183 Gene3D G3DSA:3.40.50.2020 7 179 1.5E-70 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS17135 fa4aefd42c74cf95aad343ad7f6044bd 183 SUPERFAMILY SSF53271 12 180 4.54E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS17135 fa4aefd42c74cf95aad343ad7f6044bd 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 178 3.9E-74 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 APT61_RS17135 fa4aefd42c74cf95aad343ad7f6044bd 183 PANTHER PTHR11776 6 183 2.7E-84 T 22-04-2016 APT61_RS17135 fa4aefd42c74cf95aad343ad7f6044bd 183 Pfam PF00156 Phosphoribosyl transferase domain 31 156 3.1E-15 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APT61_RS02020 f6b543dbda6ccbc6b2cba803621474cb 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.691 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APT61_RS02020 f6b543dbda6ccbc6b2cba803621474cb 124 Pfam PF00164 Ribosomal protein S12/S23 6 123 2.4E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02020 f6b543dbda6ccbc6b2cba803621474cb 124 Gene3D G3DSA:2.40.50.140 1 123 3.4E-65 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS02020 f6b543dbda6ccbc6b2cba803621474cb 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 4.58E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APT61_RS02020 f6b543dbda6ccbc6b2cba803621474cb 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 4.58E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APT61_RS02020 f6b543dbda6ccbc6b2cba803621474cb 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 4.58E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APT61_RS02020 f6b543dbda6ccbc6b2cba803621474cb 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 4.58E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APT61_RS02020 f6b543dbda6ccbc6b2cba803621474cb 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 4.58E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APT61_RS02020 f6b543dbda6ccbc6b2cba803621474cb 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 4.58E-60 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APT61_RS02020 f6b543dbda6ccbc6b2cba803621474cb 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 1.8E-70 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 APT61_RS02020 f6b543dbda6ccbc6b2cba803621474cb 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02020 f6b543dbda6ccbc6b2cba803621474cb 124 PANTHER PTHR11652 1 116 5.1E-76 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02020 f6b543dbda6ccbc6b2cba803621474cb 124 PIRSF PIRSF002133 1 124 3.3E-54 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02020 f6b543dbda6ccbc6b2cba803621474cb 124 SUPERFAMILY SSF50249 3 123 8.14E-52 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS08340 5e812eb2576d0904a161556fc48e639a 473 Pfam PF07690 Major Facilitator Superfamily 21 411 4.2E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS08340 5e812eb2576d0904a161556fc48e639a 473 PANTHER PTHR23501 17 472 3.3E-119 T 22-04-2016 APT61_RS08340 5e812eb2576d0904a161556fc48e639a 473 Gene3D G3DSA:1.20.1250.20 264 462 1.2E-11 T 22-04-2016 APT61_RS08340 5e812eb2576d0904a161556fc48e639a 473 Gene3D G3DSA:1.20.1250.20 18 199 1.6E-29 T 22-04-2016 APT61_RS08340 5e812eb2576d0904a161556fc48e639a 473 PANTHER PTHR23501:SF66 17 472 3.3E-119 T 22-04-2016 APT61_RS08340 5e812eb2576d0904a161556fc48e639a 473 SUPERFAMILY SSF103473 250 462 8.37E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS08340 5e812eb2576d0904a161556fc48e639a 473 SUPERFAMILY SSF103473 16 202 8.37E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS15195 678d7cf1db93c20366dfde1ee6b76025 220 PANTHER PTHR39583 1 219 5.8E-31 T 22-04-2016 APT61_RS15195 678d7cf1db93c20366dfde1ee6b76025 220 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS15195 678d7cf1db93c20366dfde1ee6b76025 220 Pfam PF13633 Prokaryotic N-terminal methylation site 7 32 1.3E-9 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS15195 678d7cf1db93c20366dfde1ee6b76025 220 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 8 175 1.6E-30 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 APT61_RS15195 678d7cf1db93c20366dfde1ee6b76025 220 Pfam PF11612 Type II secretion system (T2SS), protein J 60 179 5.3E-20 T 22-04-2016 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 APT61_RS15195 678d7cf1db93c20366dfde1ee6b76025 220 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 1.4E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS15195 678d7cf1db93c20366dfde1ee6b76025 220 Gene3D G3DSA:2.10.70.20 137 183 2.5E-10 T 22-04-2016 APT61_RS15195 678d7cf1db93c20366dfde1ee6b76025 220 Gene3D G3DSA:3.10.610.10 41 133 1.8E-13 T 22-04-2016 APT61_RS15195 678d7cf1db93c20366dfde1ee6b76025 220 PANTHER PTHR39583:SF1 1 219 5.8E-31 T 22-04-2016 APT61_RS15195 678d7cf1db93c20366dfde1ee6b76025 220 SUPERFAMILY SSF54523 43 187 8.89E-35 T 22-04-2016 APT61_RS17885 541dfc24ba513127b34394c0a171515a 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 8.2E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS17885 541dfc24ba513127b34394c0a171515a 188 PANTHER PTHR30055 7 188 5.8E-33 T 22-04-2016 APT61_RS17885 541dfc24ba513127b34394c0a171515a 188 SUPERFAMILY SSF46689 3 83 1.39E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS17885 541dfc24ba513127b34394c0a171515a 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.8E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS17885 541dfc24ba513127b34394c0a171515a 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.8E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS17885 541dfc24ba513127b34394c0a171515a 188 PANTHER PTHR30055:SF47 7 188 5.8E-33 T 22-04-2016 APT61_RS17885 541dfc24ba513127b34394c0a171515a 188 Gene3D G3DSA:1.10.357.10 3 183 7.7E-32 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS17885 541dfc24ba513127b34394c0a171515a 188 SUPERFAMILY SSF48498 79 184 3.2E-19 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS16405 c119ac1a71aca7a62b26075da852150f 105 SUPERFAMILY SSF81301 4 105 3.76E-37 T 22-04-2016 APT61_RS16405 c119ac1a71aca7a62b26075da852150f 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.1E-28 T 22-04-2016 APT61_RS16405 c119ac1a71aca7a62b26075da852150f 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.585 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APT61_RS16405 c119ac1a71aca7a62b26075da852150f 105 PANTHER PTHR21043 1 105 5.6E-48 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APT61_RS16405 c119ac1a71aca7a62b26075da852150f 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 2.8E-38 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS APT61_RS16405 c119ac1a71aca7a62b26075da852150f 105 Gene3D G3DSA:3.30.460.10 4 105 2.3E-38 T 22-04-2016 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 Pfam PF03129 Anticodon binding domain 475 567 3.2E-22 T 22-04-2016 IPR004154 Anticodon-binding APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 Gene3D G3DSA:3.30.930.10 407 468 2.4E-109 T 22-04-2016 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 Gene3D G3DSA:3.30.930.10 1 228 2.4E-109 T 22-04-2016 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 SUPERFAMILY SSF55826 219 390 5.36E-31 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 PANTHER PTHR11451 4 244 9.0E-162 T 22-04-2016 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 PANTHER PTHR11451 399 571 9.0E-162 T 22-04-2016 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 1.3E-26 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 1.6E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 1.6E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 1.6E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.6E-18 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 SUPERFAMILY SSF55681 407 478 8.23E-109 T 22-04-2016 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 SUPERFAMILY SSF55681 10 237 8.23E-109 T 22-04-2016 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 PIRSF PIRSF001535 1 572 8.0E-279 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 Gene3D G3DSA:3.40.50.800 470 570 2.0E-32 T 22-04-2016 IPR004154 Anticodon-binding APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 PANTHER PTHR11451:SF3 4 244 9.0E-162 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 PANTHER PTHR11451:SF3 399 571 9.0E-162 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 43.208 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 Gene3D G3DSA:3.90.960.10 248 388 1.8E-32 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 567 2.4E-279 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 SUPERFAMILY SSF52954 463 570 4.23E-34 T 22-04-2016 IPR004154 Anticodon-binding APT61_RS18135 5164a7da3b91aaecd6419f646b4699ce 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 1.8E-48 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS14845 ac7b0c5c10b30c3b7296f9fd3fdb8391 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 249 5.3E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS14845 ac7b0c5c10b30c3b7296f9fd3fdb8391 263 SUPERFAMILY SSF161098 56 237 1.23E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS14845 ac7b0c5c10b30c3b7296f9fd3fdb8391 263 PANTHER PTHR30151 5 263 3.4E-187 T 22-04-2016 APT61_RS14845 ac7b0c5c10b30c3b7296f9fd3fdb8391 263 Gene3D G3DSA:1.10.3720.10 55 250 3.2E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS14845 ac7b0c5c10b30c3b7296f9fd3fdb8391 263 PANTHER PTHR30151:SF22 5 263 3.4E-187 T 22-04-2016 APT61_RS21080 3885f83b3496456a4d8625aabbd14d9a 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 53.156 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APT61_RS21080 3885f83b3496456a4d8625aabbd14d9a 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 8.0E-143 T 22-04-2016 APT61_RS21080 3885f83b3496456a4d8625aabbd14d9a 309 PANTHER PTHR20919 2 309 1.0E-163 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APT61_RS21080 3885f83b3496456a4d8625aabbd14d9a 309 PANTHER PTHR20919:SF0 2 309 1.0E-163 T 22-04-2016 APT61_RS21080 3885f83b3496456a4d8625aabbd14d9a 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.8E-132 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APT61_RS21080 3885f83b3496456a4d8625aabbd14d9a 309 Gene3D G3DSA:3.40.50.880 34 301 1.1E-123 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS21080 3885f83b3496456a4d8625aabbd14d9a 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 1.1E-164 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APT61_RS21080 3885f83b3496456a4d8625aabbd14d9a 309 PIRSF PIRSF000450 1 308 2.6E-147 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 APT61_RS21080 3885f83b3496456a4d8625aabbd14d9a 309 SUPERFAMILY SSF52317 17 297 5.39E-103 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS05855 ebc324c282b52eb8fdcdbaefba9d9f7b 462 Gene3D G3DSA:3.30.565.10 306 459 9.5E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS05855 ebc324c282b52eb8fdcdbaefba9d9f7b 462 PANTHER PTHR24423:SF473 174 458 4.5E-207 T 22-04-2016 APT61_RS05855 ebc324c282b52eb8fdcdbaefba9d9f7b 462 Gene3D G3DSA:1.10.287.130 226 298 1.5E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS05855 ebc324c282b52eb8fdcdbaefba9d9f7b 462 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 456 9.0E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS05855 ebc324c282b52eb8fdcdbaefba9d9f7b 462 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 298 1.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS05855 ebc324c282b52eb8fdcdbaefba9d9f7b 462 SUPERFAMILY SSF47384 220 298 1.71E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS05855 ebc324c282b52eb8fdcdbaefba9d9f7b 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 6.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS05855 ebc324c282b52eb8fdcdbaefba9d9f7b 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 6.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS05855 ebc324c282b52eb8fdcdbaefba9d9f7b 462 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 6.1E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS05855 ebc324c282b52eb8fdcdbaefba9d9f7b 462 SUPERFAMILY SSF55874 306 455 3.54E-30 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS05855 ebc324c282b52eb8fdcdbaefba9d9f7b 462 SMART SM00388 234 302 1.9E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS05855 ebc324c282b52eb8fdcdbaefba9d9f7b 462 SMART SM00387 345 457 7.9E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS05855 ebc324c282b52eb8fdcdbaefba9d9f7b 462 PANTHER PTHR24423 174 458 4.5E-207 T 22-04-2016 APT61_RS02375 0b3d26693b46f8f46e9e857c0711b992 156 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 112 129 - T 22-04-2016 IPR001882 Biotin-binding site APT61_RS02375 0b3d26693b46f8f46e9e857c0711b992 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 85 98 1.8E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APT61_RS02375 0b3d26693b46f8f46e9e857c0711b992 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 117 130 1.8E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APT61_RS02375 0b3d26693b46f8f46e9e857c0711b992 156 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 102 116 1.8E-18 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APT61_RS02375 0b3d26693b46f8f46e9e857c0711b992 156 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 156 1.6E-71 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 APT61_RS02375 0b3d26693b46f8f46e9e857c0711b992 156 Gene3D G3DSA:2.40.50.100 80 156 6.7E-33 T 22-04-2016 APT61_RS02375 0b3d26693b46f8f46e9e857c0711b992 156 SUPERFAMILY SSF51230 81 156 3.14E-26 T 22-04-2016 IPR011053 Single hybrid motif APT61_RS02375 0b3d26693b46f8f46e9e857c0711b992 156 Pfam PF00364 Biotin-requiring enzyme 83 155 2.8E-25 T 22-04-2016 IPR000089 Biotin/lipoyl attachment APT61_RS02375 0b3d26693b46f8f46e9e857c0711b992 156 PANTHER PTHR23151 1 156 1.9E-52 T 22-04-2016 APT61_RS14670 bf39a70fc61f39dfb29a4a3c4c680b99 559 Gene3D G3DSA:2.60.120.200 333 538 1.7E-61 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APT61_RS14670 bf39a70fc61f39dfb29a4a3c4c680b99 559 Pfam PF04616 Glycosyl hydrolases family 43 4 305 1.3E-96 T 22-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APT61_RS14670 bf39a70fc61f39dfb29a4a3c4c680b99 559 Gene3D G3DSA:2.115.10.20 4 313 1.3E-94 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APT61_RS14670 bf39a70fc61f39dfb29a4a3c4c680b99 559 SUPERFAMILY SSF75005 4 321 6.14E-95 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APT61_RS14670 bf39a70fc61f39dfb29a4a3c4c680b99 559 SUPERFAMILY SSF49899 331 538 6.33E-55 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APT61_RS14670 bf39a70fc61f39dfb29a4a3c4c680b99 559 PANTHER PTHR22925 1 537 2.6E-184 T 22-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APT61_RS14670 bf39a70fc61f39dfb29a4a3c4c680b99 559 PANTHER PTHR22925:SF44 1 537 2.6E-184 T 22-04-2016 APT61_RS16430 113a88f8cba2ca768ffb6c914a49c504 403 SUPERFAMILY SSF56601 13 292 1.29E-74 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS16430 113a88f8cba2ca768ffb6c914a49c504 403 SMART SM00936 292 383 2.0E-33 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS16430 113a88f8cba2ca768ffb6c914a49c504 403 Gene3D G3DSA:2.60.410.10 292 383 7.9E-32 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS16430 113a88f8cba2ca768ffb6c914a49c504 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 6.0E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APT61_RS16430 113a88f8cba2ca768ffb6c914a49c504 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 6.0E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APT61_RS16430 113a88f8cba2ca768ffb6c914a49c504 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 6.0E-17 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APT61_RS16430 113a88f8cba2ca768ffb6c914a49c504 403 PANTHER PTHR21581 21 403 4.0E-209 T 22-04-2016 APT61_RS16430 113a88f8cba2ca768ffb6c914a49c504 403 Gene3D G3DSA:3.40.710.10 37 290 8.0E-92 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS16430 113a88f8cba2ca768ffb6c914a49c504 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 1.6E-24 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS16430 113a88f8cba2ca768ffb6c914a49c504 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 2.5E-100 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APT61_RS16430 113a88f8cba2ca768ffb6c914a49c504 403 SUPERFAMILY SSF69189 292 385 1.53E-24 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS16430 113a88f8cba2ca768ffb6c914a49c504 403 PANTHER PTHR21581:SF4 21 403 4.0E-209 T 22-04-2016 APT61_RS15785 99985c6a5d8beb088e2d9cb801b0b6ad 413 PANTHER PTHR21248 1 380 1.8E-117 T 22-04-2016 APT61_RS15785 99985c6a5d8beb088e2d9cb801b0b6ad 413 Gene3D G3DSA:3.30.870.10 4 166 7.6E-40 T 22-04-2016 APT61_RS15785 99985c6a5d8beb088e2d9cb801b0b6ad 413 Gene3D G3DSA:3.30.870.10 206 345 7.5E-32 T 22-04-2016 APT61_RS15785 99985c6a5d8beb088e2d9cb801b0b6ad 413 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 383 51.593 T 22-04-2016 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 APT61_RS15785 99985c6a5d8beb088e2d9cb801b0b6ad 413 SUPERFAMILY SSF56024 4 164 7.59E-40 T 22-04-2016 APT61_RS15785 99985c6a5d8beb088e2d9cb801b0b6ad 413 SMART SM00155 285 312 10.0 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APT61_RS15785 99985c6a5d8beb088e2d9cb801b0b6ad 413 SMART SM00155 108 135 4.3E-6 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 APT61_RS15785 99985c6a5d8beb088e2d9cb801b0b6ad 413 SUPERFAMILY SSF56024 189 357 6.5E-38 T 22-04-2016 APT61_RS15785 99985c6a5d8beb088e2d9cb801b0b6ad 413 PANTHER PTHR21248:SF5 1 380 1.8E-117 T 22-04-2016 APT61_RS15785 99985c6a5d8beb088e2d9cb801b0b6ad 413 Pfam PF13091 PLD-like domain 213 336 3.1E-26 T 22-04-2016 IPR025202 Phospholipase D-like domain APT61_RS15785 99985c6a5d8beb088e2d9cb801b0b6ad 413 Pfam PF13091 PLD-like domain 26 143 1.4E-14 T 22-04-2016 IPR025202 Phospholipase D-like domain APT61_RS07820 5449a2de05f705d8759901f02f200ef8 326 Gene3D G3DSA:3.30.1890.10 52 186 7.4E-49 T 22-04-2016 APT61_RS07820 5449a2de05f705d8759901f02f200ef8 326 Gene3D G3DSA:3.30.1890.10 251 294 7.4E-49 T 22-04-2016 APT61_RS07820 5449a2de05f705d8759901f02f200ef8 326 SUPERFAMILY SSF160355 54 292 6.93E-61 T 22-04-2016 APT61_RS07820 5449a2de05f705d8759901f02f200ef8 326 Pfam PF02706 Chain length determinant protein 16 178 1.2E-15 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APT61_RS02900 ad5e97471f41cd6951aae909a6574fad 191 Pfam PF04972 BON domain 46 113 5.9E-14 T 22-04-2016 IPR007055 BON domain APT61_RS02900 ad5e97471f41cd6951aae909a6574fad 191 Pfam PF04972 BON domain 124 189 6.5E-17 T 22-04-2016 IPR007055 BON domain APT61_RS02900 ad5e97471f41cd6951aae909a6574fad 191 PANTHER PTHR34606:SF4 1 190 1.8E-96 T 22-04-2016 APT61_RS02900 ad5e97471f41cd6951aae909a6574fad 191 PANTHER PTHR34606 1 190 1.8E-96 T 22-04-2016 APT61_RS02900 ad5e97471f41cd6951aae909a6574fad 191 SMART SM00749 51 114 1.5E-11 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria APT61_RS02900 ad5e97471f41cd6951aae909a6574fad 191 SMART SM00749 129 191 1.4E-5 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria APT61_RS00875 d626ed12ea95c6c098118a86f2e484e9 376 Gene3D G3DSA:3.40.640.10 1 248 1.3E-78 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS00875 d626ed12ea95c6c098118a86f2e484e9 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 3.9E-218 T 22-04-2016 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315|UniPathway: UPA00566 APT61_RS00875 d626ed12ea95c6c098118a86f2e484e9 376 Gene3D G3DSA:3.90.1150.10 251 375 9.0E-23 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS00875 d626ed12ea95c6c098118a86f2e484e9 376 PIRSF PIRSF000390 1 376 2.7E-120 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APT61_RS00875 d626ed12ea95c6c098118a86f2e484e9 376 PANTHER PTHR30244 1 376 4.3E-286 T 22-04-2016 APT61_RS00875 d626ed12ea95c6c098118a86f2e484e9 376 PANTHER PTHR30244:SF14 1 376 4.3E-286 T 22-04-2016 APT61_RS00875 d626ed12ea95c6c098118a86f2e484e9 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 78.145 T 22-04-2016 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315|UniPathway: UPA00566 APT61_RS00875 d626ed12ea95c6c098118a86f2e484e9 376 SUPERFAMILY SSF53383 2 375 2.69E-101 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS00875 d626ed12ea95c6c098118a86f2e484e9 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 2.3E-88 T 22-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase APT61_RS10080 cb0312d753f4fa0da6a00321fcb2b026 311 Pfam PF08223 PaaX-like protein C-terminal domain 107 277 3.3E-55 T 22-04-2016 IPR013225 PaaX-like, C-terminal UniPathway: UPA00930 APT61_RS10080 cb0312d753f4fa0da6a00321fcb2b026 311 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 24 306 3.6E-115 T 22-04-2016 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 UniPathway: UPA00930 APT61_RS10080 cb0312d753f4fa0da6a00321fcb2b026 311 PIRSF PIRSF020623 4 309 8.9E-130 T 22-04-2016 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 UniPathway: UPA00930 APT61_RS10080 cb0312d753f4fa0da6a00321fcb2b026 311 PANTHER PTHR30319 5 308 7.5E-93 T 22-04-2016 APT61_RS10080 cb0312d753f4fa0da6a00321fcb2b026 311 PANTHER PTHR30319:SF1 5 308 7.5E-93 T 22-04-2016 APT61_RS10080 cb0312d753f4fa0da6a00321fcb2b026 311 Pfam PF07848 PaaX-like protein 22 90 1.0E-28 T 22-04-2016 IPR012906 PaaX-like, N-terminal UniPathway: UPA00930 APT61_RS21595 fbba4825442e60e507b6c8045af06974 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 2.0E-186 T 22-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 APT61_RS21595 fbba4825442e60e507b6c8045af06974 341 SUPERFAMILY SSF50129 1 173 1.51E-53 T 22-04-2016 IPR011032 GroES-like APT61_RS21595 fbba4825442e60e507b6c8045af06974 341 PANTHER PTHR11695 13 341 7.5E-162 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS21595 fbba4825442e60e507b6c8045af06974 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 60.877 T 22-04-2016 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378|UniPathway: UPA00046 APT61_RS21595 fbba4825442e60e507b6c8045af06974 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APT61_RS21595 fbba4825442e60e507b6c8045af06974 341 Gene3D G3DSA:3.40.50.720 173 287 2.7E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS21595 fbba4825442e60e507b6c8045af06974 341 SUPERFAMILY SSF51735 141 305 5.44E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS21595 fbba4825442e60e507b6c8045af06974 341 PANTHER PTHR11695:SF285 13 341 7.5E-162 T 22-04-2016 APT61_RS21595 fbba4825442e60e507b6c8045af06974 341 SMART SM00829 12 338 1.3E-5 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APT61_RS21595 fbba4825442e60e507b6c8045af06974 341 Gene3D G3DSA:3.90.180.10 1 172 2.0E-51 T 22-04-2016 IPR011032 GroES-like APT61_RS21595 fbba4825442e60e507b6c8045af06974 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 2.3E-27 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APT61_RS21595 fbba4825442e60e507b6c8045af06974 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 6.4E-32 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APT61_RS15880 291e8e5a06aa0ad9d2d806dfc6c7ea7f 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 79 7.4E-23 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS15880 291e8e5a06aa0ad9d2d806dfc6c7ea7f 244 SMART SM00866 100 237 2.5E-33 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APT61_RS15880 291e8e5a06aa0ad9d2d806dfc6c7ea7f 244 Pfam PF07702 UTRA domain 101 237 2.8E-35 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APT61_RS15880 291e8e5a06aa0ad9d2d806dfc6c7ea7f 244 PANTHER PTHR11751:SF364 12 103 5.0E-51 T 22-04-2016 APT61_RS15880 291e8e5a06aa0ad9d2d806dfc6c7ea7f 244 Gene3D G3DSA:1.10.10.10 11 86 4.4E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15880 291e8e5a06aa0ad9d2d806dfc6c7ea7f 244 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 15 243 1.4E-104 T 22-04-2016 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 UniPathway: UPA00379 APT61_RS15880 291e8e5a06aa0ad9d2d806dfc6c7ea7f 244 PANTHER PTHR11751 12 103 5.0E-51 T 22-04-2016 APT61_RS15880 291e8e5a06aa0ad9d2d806dfc6c7ea7f 244 SMART SM00345 20 79 2.4E-24 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS15880 291e8e5a06aa0ad9d2d806dfc6c7ea7f 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 4.1E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS15880 291e8e5a06aa0ad9d2d806dfc6c7ea7f 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 4.1E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS15880 291e8e5a06aa0ad9d2d806dfc6c7ea7f 244 SUPERFAMILY SSF46785 11 99 1.02E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15880 291e8e5a06aa0ad9d2d806dfc6c7ea7f 244 Gene3D G3DSA:3.40.1410.10 97 233 5.9E-49 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APT61_RS15880 291e8e5a06aa0ad9d2d806dfc6c7ea7f 244 SUPERFAMILY SSF64288 67 240 5.5E-42 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APT61_RS21345 3967f4671f2720462ee7ff5b8b4d32da 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APT61_RS21345 3967f4671f2720462ee7ff5b8b4d32da 312 PANTHER PTHR10584:SF186 7 312 2.3E-105 T 22-04-2016 APT61_RS21345 3967f4671f2720462ee7ff5b8b4d32da 312 PANTHER PTHR10584 7 312 2.3E-105 T 22-04-2016 APT61_RS21345 3967f4671f2720462ee7ff5b8b4d32da 312 Pfam PF00294 pfkB family carbohydrate kinase 6 306 3.4E-60 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APT61_RS21345 3967f4671f2720462ee7ff5b8b4d32da 312 SUPERFAMILY SSF53613 5 311 6.86E-83 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS21345 3967f4671f2720462ee7ff5b8b4d32da 312 Gene3D G3DSA:3.40.1190.20 2 312 4.3E-89 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS20340 6641ecd7a4d5fc792c59425bb2c795f0 102 PANTHER PTHR34772 1 94 3.5E-44 T 22-04-2016 APT61_RS20340 6641ecd7a4d5fc792c59425bb2c795f0 102 Gene3D G3DSA:2.30.30.100 1 74 4.5E-38 T 22-04-2016 APT61_RS20340 6641ecd7a4d5fc792c59425bb2c795f0 102 PANTHER PTHR34772:SF1 1 94 3.5E-44 T 22-04-2016 APT61_RS20340 6641ecd7a4d5fc792c59425bb2c795f0 102 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 APT61_RS20340 6641ecd7a4d5fc792c59425bb2c795f0 102 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 22-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 APT61_RS20340 6641ecd7a4d5fc792c59425bb2c795f0 102 SUPERFAMILY SSF50182 7 69 4.04E-24 T 22-04-2016 IPR010920 LSM domain APT61_RS21875 83b6e13141311b55b887667acfa475e3 98 Gene3D G3DSA:1.10.565.10 1 64 1.6E-4 T 22-04-2016 IPR000536 Nuclear hormone receptor, ligand-binding domain GO:0006355|GO:0043401 Reactome: REACT_71 APT61_RS10420 624bae206151cf619e0d683fdd07f32d 134 PANTHER PTHR10545 27 125 2.9E-15 T 22-04-2016 APT61_RS10420 624bae206151cf619e0d683fdd07f32d 134 Pfam PF00583 Acetyltransferase (GNAT) family 26 101 3.9E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS10420 624bae206151cf619e0d683fdd07f32d 134 Gene3D G3DSA:3.40.630.30 3 107 2.9E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS10420 624bae206151cf619e0d683fdd07f32d 134 SUPERFAMILY SSF55729 3 118 1.49E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS10005 d4c37c460096f8df4fe0876b2504f29f 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 281 297 4.3E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS10005 d4c37c460096f8df4fe0876b2504f29f 301 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 266 281 4.3E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS10005 d4c37c460096f8df4fe0876b2504f29f 301 Gene3D G3DSA:1.10.10.60 249 300 1.1E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS10005 d4c37c460096f8df4fe0876b2504f29f 301 Gene3D G3DSA:2.60.120.10 73 119 3.5E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS10005 d4c37c460096f8df4fe0876b2504f29f 301 PANTHER PTHR11019 54 301 2.0E-44 T 22-04-2016 APT61_RS10005 d4c37c460096f8df4fe0876b2504f29f 301 Gene3D G3DSA:1.10.10.60 192 248 8.3E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS10005 d4c37c460096f8df4fe0876b2504f29f 301 SUPERFAMILY SSF46689 248 300 5.82E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS10005 d4c37c460096f8df4fe0876b2504f29f 301 Pfam PF12833 Helix-turn-helix domain 219 299 6.9E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS10005 d4c37c460096f8df4fe0876b2504f29f 301 SMART SM00342 213 297 1.8E-28 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS10005 d4c37c460096f8df4fe0876b2504f29f 301 PANTHER PTHR11019:SF50 54 301 2.0E-44 T 22-04-2016 APT61_RS10005 d4c37c460096f8df4fe0876b2504f29f 301 Pfam PF14525 AraC-binding-like domain 12 184 1.6E-23 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS14105 2eb0e2b7965daa1f8bd158750c5dc020 140 SUPERFAMILY SSF140566 1 113 1.44E-16 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 APT61_RS14105 2eb0e2b7965daa1f8bd158750c5dc020 140 Pfam PF05130 FlgN protein 2 129 8.2E-20 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 APT61_RS14105 2eb0e2b7965daa1f8bd158750c5dc020 140 Gene3D G3DSA:1.20.58.300 2 114 1.8E-12 T 22-04-2016 IPR007809 FlgN-like protein GO:0005515|GO:0044780 APT61_RS09120 b7286c8277583469475f0cf563c31657 131 Gene3D G3DSA:3.40.250.10 27 127 1.6E-14 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS09120 b7286c8277583469475f0cf563c31657 131 SUPERFAMILY SSF52821 27 128 2.88E-19 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS09120 b7286c8277583469475f0cf563c31657 131 SMART SM00450 29 127 3.0E-5 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS09120 b7286c8277583469475f0cf563c31657 131 Pfam PF00581 Rhodanese-like domain 40 123 9.5E-9 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS16470 d1348cf26fc000d84f9118a96c990f85 69 PANTHER PTHR11544 1 69 1.6E-43 T 22-04-2016 APT61_RS16470 d1348cf26fc000d84f9118a96c990f85 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 1.1E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS16470 d1348cf26fc000d84f9118a96c990f85 69 PRINTS PR00050 Cold shock protein signature 27 36 1.8E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS16470 d1348cf26fc000d84f9118a96c990f85 69 PRINTS PR00050 Cold shock protein signature 42 60 1.8E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS16470 d1348cf26fc000d84f9118a96c990f85 69 PRINTS PR00050 Cold shock protein signature 6 21 1.8E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS16470 d1348cf26fc000d84f9118a96c990f85 69 Gene3D G3DSA:2.40.50.140 4 67 1.2E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS16470 d1348cf26fc000d84f9118a96c990f85 69 PIRSF PIRSF002599 1 69 1.8E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APT61_RS16470 d1348cf26fc000d84f9118a96c990f85 69 SMART SM00357 5 69 2.4E-33 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APT61_RS16470 d1348cf26fc000d84f9118a96c990f85 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 22-04-2016 IPR019844 Cold-shock conserved site APT61_RS16470 d1348cf26fc000d84f9118a96c990f85 69 SUPERFAMILY SSF50249 3 68 5.36E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 Pfam PF00773 RNB domain 189 516 5.5E-84 T 22-04-2016 APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 44.814 T 22-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 SUPERFAMILY SSF50249 83 171 5.57E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 Pfam PF00575 S1 RNA binding domain 559 636 3.2E-9 T 22-04-2016 IPR003029 S1 domain GO:0003676 APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 SUPERFAMILY SSF50249 8 80 3.55E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 SMART SM00357 23 79 1.1E-14 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 SUPERFAMILY SSF50249 179 556 2.36E-113 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 SMART SM00955 189 517 3.2E-123 T 22-04-2016 APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 Pfam PF08206 Ribonuclease B OB domain 24 80 3.0E-19 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 PANTHER PTHR23355 23 642 0.0 T 22-04-2016 APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 PANTHER PTHR23355:SF37 23 642 0.0 T 22-04-2016 APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 SUPERFAMILY SSF50249 560 641 7.2E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 641 7.6E-238 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 APT61_RS09625 25d62e4e2ae1c70e5ce7ed12f8a6a108 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 22-04-2016 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 APT61_RS11390 8994159c6a848e977fac3bc61e7497d8 100 Gene3D G3DSA:1.10.10.10 1 92 1.5E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11390 8994159c6a848e977fac3bc61e7497d8 100 SMART SM00418 10 88 1.9E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APT61_RS11390 8994159c6a848e977fac3bc61e7497d8 100 Pfam PF01022 Bacterial regulatory protein, arsR family 19 62 2.3E-10 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APT61_RS11390 8994159c6a848e977fac3bc61e7497d8 100 SUPERFAMILY SSF46785 8 91 1.7E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11390 8994159c6a848e977fac3bc61e7497d8 100 PANTHER PTHR33154:SF9 1 100 6.8E-23 T 22-04-2016 APT61_RS11390 8994159c6a848e977fac3bc61e7497d8 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 3.4E-7 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APT61_RS11390 8994159c6a848e977fac3bc61e7497d8 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 3.4E-7 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APT61_RS11390 8994159c6a848e977fac3bc61e7497d8 100 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 3.4E-7 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APT61_RS11390 8994159c6a848e977fac3bc61e7497d8 100 PANTHER PTHR33154 1 100 6.8E-23 T 22-04-2016 APT61_RS12100 f5c9c814acce6b69d6bc725dc47b1fca 508 PANTHER PTHR30282 1 508 1.8E-263 T 22-04-2016 APT61_RS12100 f5c9c814acce6b69d6bc725dc47b1fca 508 Pfam PF03806 AbgT putative transporter family 14 505 9.4E-201 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 APT61_RS12100 f5c9c814acce6b69d6bc725dc47b1fca 508 TIGRFAM TIGR00819 ydaH: AbgT transporter family 1 507 6.5E-257 T 22-04-2016 IPR011540 AbgT, Proteobacteria GO:0015558|GO:1902604 APT61_RS12100 f5c9c814acce6b69d6bc725dc47b1fca 508 PANTHER PTHR30282:SF0 1 508 1.8E-263 T 22-04-2016 IPR004697 p-aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 APT61_RS12010 475778d60c605c91525e7f940beef3b2 382 SUPERFAMILY SSF54631 255 369 4.36E-17 T 22-04-2016 APT61_RS12010 475778d60c605c91525e7f940beef3b2 382 Gene3D G3DSA:3.10.580.10 253 368 2.4E-20 T 22-04-2016 APT61_RS12010 475778d60c605c91525e7f940beef3b2 382 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 19 367 1.1E-104 T 22-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 APT61_RS12010 475778d60c605c91525e7f940beef3b2 382 PANTHER PTHR24220:SF350 3 292 1.4E-155 T 22-04-2016 APT61_RS12010 475778d60c605c91525e7f940beef3b2 382 Pfam PF00005 ABC transporter 22 168 7.6E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS12010 475778d60c605c91525e7f940beef3b2 382 SMART SM00116 263 311 1.6E-5 T 22-04-2016 IPR000644 CBS domain APT61_RS12010 475778d60c605c91525e7f940beef3b2 382 SUPERFAMILY SSF52540 1 245 6.82E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12010 475778d60c605c91525e7f940beef3b2 382 SMART SM00382 31 218 3.6E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS12010 475778d60c605c91525e7f940beef3b2 382 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS12010 475778d60c605c91525e7f940beef3b2 382 Pfam PF00571 CBS domain 326 368 0.0015 T 22-04-2016 IPR000644 CBS domain APT61_RS12010 475778d60c605c91525e7f940beef3b2 382 Pfam PF00571 CBS domain 256 305 2.0E-6 T 22-04-2016 IPR000644 CBS domain APT61_RS12010 475778d60c605c91525e7f940beef3b2 382 Gene3D G3DSA:3.40.50.300 1 239 9.7E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12010 475778d60c605c91525e7f940beef3b2 382 PANTHER PTHR24220 3 292 1.4E-155 T 22-04-2016 APT61_RS06700 ab66b9d3a00a034103111060da2e425a 422 Gene3D G3DSA:3.40.1190.10 12 284 7.0E-92 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS06700 ab66b9d3a00a034103111060da2e425a 422 Gene3D G3DSA:3.90.190.20 288 414 6.8E-45 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS06700 ab66b9d3a00a034103111060da2e425a 422 SUPERFAMILY SSF53244 287 413 2.75E-32 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS06700 ab66b9d3a00a034103111060da2e425a 422 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 52 75 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 APT61_RS06700 ab66b9d3a00a034103111060da2e425a 422 PANTHER PTHR11136 8 415 1.2E-134 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APT61_RS06700 ab66b9d3a00a034103111060da2e425a 422 PANTHER PTHR11136:SF0 8 415 1.2E-134 T 22-04-2016 APT61_RS06700 ab66b9d3a00a034103111060da2e425a 422 Pfam PF08245 Mur ligase middle domain 54 196 4.3E-11 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS06700 ab66b9d3a00a034103111060da2e425a 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 APT61_RS06700 ab66b9d3a00a034103111060da2e425a 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 337 4.2E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS06700 ab66b9d3a00a034103111060da2e425a 422 PIRSF PIRSF001563 6 419 1.5E-107 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APT61_RS06700 ab66b9d3a00a034103111060da2e425a 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 413 8.5E-110 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 APT61_RS06700 ab66b9d3a00a034103111060da2e425a 422 SUPERFAMILY SSF53623 13 285 9.46E-89 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS20915 d093f379436765e498ec89682ee4d2aa 331 PIRSF PIRSF006621 1 329 9.4E-71 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APT61_RS20915 d093f379436765e498ec89682ee4d2aa 331 PANTHER PTHR11082:SF29 2 329 2.4E-171 T 22-04-2016 APT61_RS20915 d093f379436765e498ec89682ee4d2aa 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 APT61_RS20915 d093f379436765e498ec89682ee4d2aa 331 SUPERFAMILY SSF51395 12 323 3.04E-72 T 22-04-2016 APT61_RS20915 d093f379436765e498ec89682ee4d2aa 331 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 13 328 1.2E-169 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 APT61_RS20915 d093f379436765e498ec89682ee4d2aa 331 Gene3D G3DSA:3.20.20.70 12 252 6.8E-74 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS20915 d093f379436765e498ec89682ee4d2aa 331 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 4 329 53.064 T 22-04-2016 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 APT61_RS20915 d093f379436765e498ec89682ee4d2aa 331 Pfam PF01207 Dihydrouridine synthase (Dus) 16 325 6.4E-98 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APT61_RS20915 d093f379436765e498ec89682ee4d2aa 331 PANTHER PTHR11082 2 329 2.4E-171 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 APT61_RS03005 823a6cd2f26d8ef8136abafe194b5e16 298 Gene3D G3DSA:1.10.10.10 7 92 3.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03005 823a6cd2f26d8ef8136abafe194b5e16 298 Pfam PF03466 LysR substrate binding domain 95 285 7.0E-19 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS03005 823a6cd2f26d8ef8136abafe194b5e16 298 SUPERFAMILY SSF53850 93 291 2.92E-24 T 22-04-2016 APT61_RS03005 823a6cd2f26d8ef8136abafe194b5e16 298 SUPERFAMILY SSF46785 5 115 1.41E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03005 823a6cd2f26d8ef8136abafe194b5e16 298 Gene3D G3DSA:3.40.190.10 178 265 8.8E-10 T 22-04-2016 APT61_RS03005 823a6cd2f26d8ef8136abafe194b5e16 298 PANTHER PTHR30126:SF22 6 295 1.3E-211 T 22-04-2016 APT61_RS03005 823a6cd2f26d8ef8136abafe194b5e16 298 Gene3D G3DSA:3.40.190.10 94 177 2.4E-10 T 22-04-2016 APT61_RS03005 823a6cd2f26d8ef8136abafe194b5e16 298 PANTHER PTHR30126 6 295 1.3E-211 T 22-04-2016 APT61_RS03005 823a6cd2f26d8ef8136abafe194b5e16 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04220 a3a3a62d544721f87ac9de7d3aa1371c 183 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 7 165 5.0E-46 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 APT61_RS04220 a3a3a62d544721f87ac9de7d3aa1371c 183 Pfam PF00293 NUDIX domain 32 162 4.9E-20 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APT61_RS04220 a3a3a62d544721f87ac9de7d3aa1371c 183 SUPERFAMILY SSF55811 5 168 3.52E-47 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS04220 a3a3a62d544721f87ac9de7d3aa1371c 183 PIRSF PIRSF018427 1 181 2.5E-56 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 APT61_RS04220 a3a3a62d544721f87ac9de7d3aa1371c 183 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 5 178 32.19 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 APT61_RS04220 a3a3a62d544721f87ac9de7d3aa1371c 183 Gene3D G3DSA:3.90.79.10 4 166 2.4E-43 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS04220 a3a3a62d544721f87ac9de7d3aa1371c 183 PANTHER PTHR10885 5 165 3.6E-49 T 22-04-2016 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00059 APT61_RS13515 ca9b708cf7722ffe7b0344e305e03f9f 395 PANTHER PTHR30026 3 374 2.7E-37 T 22-04-2016 APT61_RS13515 ca9b708cf7722ffe7b0344e305e03f9f 395 SUPERFAMILY SSF56954 3 377 7.98E-59 T 22-04-2016 APT61_RS13515 ca9b708cf7722ffe7b0344e305e03f9f 395 PANTHER PTHR30026:SF4 3 374 2.7E-37 T 22-04-2016 APT61_RS13515 ca9b708cf7722ffe7b0344e305e03f9f 395 Gene3D G3DSA:1.20.1600.10 3 372 2.1E-45 T 22-04-2016 APT61_RS13515 ca9b708cf7722ffe7b0344e305e03f9f 395 Pfam PF02321 Outer membrane efflux protein 3 170 5.4E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APT61_RS13515 ca9b708cf7722ffe7b0344e305e03f9f 395 Pfam PF02321 Outer membrane efflux protein 193 372 9.0E-14 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APT61_RS08650 5ba92356a655647beef425c9d32bcbec 693 Gene3D G3DSA:2.130.10.120 73 407 1.2E-94 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 APT61_RS08650 5ba92356a655647beef425c9d32bcbec 693 SUPERFAMILY SSF50993 2 407 2.01E-77 T 22-04-2016 APT61_RS08650 5ba92356a655647beef425c9d32bcbec 693 SUPERFAMILY SSF53474 414 655 3.85E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS08650 5ba92356a655647beef425c9d32bcbec 693 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 446 464 8.8E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APT61_RS08650 5ba92356a655647beef425c9d32bcbec 693 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 550 8.8E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APT61_RS08650 5ba92356a655647beef425c9d32bcbec 693 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 628 8.8E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APT61_RS08650 5ba92356a655647beef425c9d32bcbec 693 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 500 519 8.8E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APT61_RS08650 5ba92356a655647beef425c9d32bcbec 693 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 603 8.8E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APT61_RS08650 5ba92356a655647beef425c9d32bcbec 693 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 472 496 8.8E-53 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APT61_RS08650 5ba92356a655647beef425c9d32bcbec 693 Gene3D G3DSA:3.40.50.1820 416 655 2.0E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS08650 5ba92356a655647beef425c9d32bcbec 693 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 3 403 9.2E-108 T 22-04-2016 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 APT61_RS08650 5ba92356a655647beef425c9d32bcbec 693 Pfam PF00326 Prolyl oligopeptidase family 463 675 8.8E-68 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APT61_RS08650 5ba92356a655647beef425c9d32bcbec 693 PANTHER PTHR11757:SF3 2 683 0.0 T 22-04-2016 APT61_RS08650 5ba92356a655647beef425c9d32bcbec 693 PANTHER PTHR11757 2 683 0.0 T 22-04-2016 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 APT61_RS06770 ed22bc421d5019540bf249cac8de43ad 214 Pfam PF14834 Glutathione S-transferase, C-terminal domain 95 211 9.6E-62 T 22-04-2016 APT61_RS06770 ed22bc421d5019540bf249cac8de43ad 214 SUPERFAMILY SSF47616 91 207 6.98E-10 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS06770 ed22bc421d5019540bf249cac8de43ad 214 Gene3D G3DSA:3.40.30.10 14 99 1.3E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS06770 ed22bc421d5019540bf249cac8de43ad 214 SUPERFAMILY SSF52833 14 86 2.96E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS06770 ed22bc421d5019540bf249cac8de43ad 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 86 1.8E-12 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APT61_RS06770 ed22bc421d5019540bf249cac8de43ad 214 PANTHER PTHR11260 1 120 7.5E-63 T 22-04-2016 APT61_RS06770 ed22bc421d5019540bf249cac8de43ad 214 PANTHER PTHR11260:SF322 1 120 7.5E-63 T 22-04-2016 APT61_RS06770 ed22bc421d5019540bf249cac8de43ad 214 Gene3D G3DSA:1.20.1050.10 100 212 3.6E-42 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS10795 4a5c90d10116a8920a5397d12b0da5f5 296 Gene3D G3DSA:3.40.190.10 180 264 2.2E-8 T 22-04-2016 APT61_RS10795 4a5c90d10116a8920a5397d12b0da5f5 296 PANTHER PTHR30537:SF1 1 295 4.4E-180 T 22-04-2016 APT61_RS10795 4a5c90d10116a8920a5397d12b0da5f5 296 Gene3D G3DSA:3.40.190.10 94 179 2.6E-19 T 22-04-2016 APT61_RS10795 4a5c90d10116a8920a5397d12b0da5f5 296 Pfam PF03466 LysR substrate binding domain 90 295 1.6E-39 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS10795 4a5c90d10116a8920a5397d12b0da5f5 296 SUPERFAMILY SSF53850 91 295 7.45E-43 T 22-04-2016 APT61_RS10795 4a5c90d10116a8920a5397d12b0da5f5 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 3.6E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10795 4a5c90d10116a8920a5397d12b0da5f5 296 Gene3D G3DSA:1.10.10.10 5 90 7.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10795 4a5c90d10116a8920a5397d12b0da5f5 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10795 4a5c90d10116a8920a5397d12b0da5f5 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10795 4a5c90d10116a8920a5397d12b0da5f5 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.3E-7 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10795 4a5c90d10116a8920a5397d12b0da5f5 296 PANTHER PTHR30537 1 295 4.4E-180 T 22-04-2016 APT61_RS10795 4a5c90d10116a8920a5397d12b0da5f5 296 SUPERFAMILY SSF46785 5 90 2.41E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS22110 d17a454e688789b29147f0b8a42a94ea 401 Pfam PF03222 Tryptophan/tyrosine permease family 1 389 2.3E-140 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APT61_RS22110 d17a454e688789b29147f0b8a42a94ea 401 PRINTS PR00166 Aromatic amino acid permease signature 280 299 2.9E-101 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS22110 d17a454e688789b29147f0b8a42a94ea 401 PRINTS PR00166 Aromatic amino acid permease signature 335 354 2.9E-101 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS22110 d17a454e688789b29147f0b8a42a94ea 401 PRINTS PR00166 Aromatic amino acid permease signature 139 159 2.9E-101 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS22110 d17a454e688789b29147f0b8a42a94ea 401 PRINTS PR00166 Aromatic amino acid permease signature 314 332 2.9E-101 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS22110 d17a454e688789b29147f0b8a42a94ea 401 PRINTS PR00166 Aromatic amino acid permease signature 219 238 2.9E-101 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS22110 d17a454e688789b29147f0b8a42a94ea 401 PRINTS PR00166 Aromatic amino acid permease signature 28 47 2.9E-101 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS22110 d17a454e688789b29147f0b8a42a94ea 401 PRINTS PR00166 Aromatic amino acid permease signature 73 93 2.9E-101 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS22110 d17a454e688789b29147f0b8a42a94ea 401 PRINTS PR00166 Aromatic amino acid permease signature 1 24 2.9E-101 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS22110 d17a454e688789b29147f0b8a42a94ea 401 PRINTS PR00166 Aromatic amino acid permease signature 180 202 2.9E-101 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS22110 d17a454e688789b29147f0b8a42a94ea 401 PANTHER PTHR32195:SF18 1 397 1.4E-175 T 22-04-2016 APT61_RS22110 d17a454e688789b29147f0b8a42a94ea 401 PANTHER PTHR32195 1 397 1.4E-175 T 22-04-2016 APT61_RS22110 d17a454e688789b29147f0b8a42a94ea 401 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 1 382 9.0E-149 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 APT61_RS22110 d17a454e688789b29147f0b8a42a94ea 401 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 8 24 - T 22-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site APT61_RS17855 2aeff13c6cbe2b58094fc59702f2a8d0 732 Gene3D G3DSA:3.30.365.10 353 437 9.0E-57 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APT61_RS17855 2aeff13c6cbe2b58094fc59702f2a8d0 732 Gene3D G3DSA:3.30.365.10 584 729 9.0E-57 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APT61_RS17855 2aeff13c6cbe2b58094fc59702f2a8d0 732 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 161 668 4.2E-125 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APT61_RS17855 2aeff13c6cbe2b58094fc59702f2a8d0 732 Gene3D G3DSA:3.30.365.10 281 305 7.0E-7 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APT61_RS17855 2aeff13c6cbe2b58094fc59702f2a8d0 732 Gene3D G3DSA:3.30.365.10 126 173 7.0E-7 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APT61_RS17855 2aeff13c6cbe2b58094fc59702f2a8d0 732 Gene3D G3DSA:3.30.365.10 438 569 3.2E-28 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APT61_RS17855 2aeff13c6cbe2b58094fc59702f2a8d0 732 Gene3D G3DSA:3.90.1170.50 10 125 2.1E-31 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APT61_RS17855 2aeff13c6cbe2b58094fc59702f2a8d0 732 PANTHER PTHR11908:SF71 1 732 0.0 T 22-04-2016 APT61_RS17855 2aeff13c6cbe2b58094fc59702f2a8d0 732 SUPERFAMILY SSF54665 10 136 9.16E-30 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APT61_RS17855 2aeff13c6cbe2b58094fc59702f2a8d0 732 SUPERFAMILY SSF56003 156 730 4.71E-166 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APT61_RS17855 2aeff13c6cbe2b58094fc59702f2a8d0 732 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 34 137 4.0E-22 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APT61_RS17855 2aeff13c6cbe2b58094fc59702f2a8d0 732 PANTHER PTHR11908 1 732 0.0 T 22-04-2016 APT61_RS17855 2aeff13c6cbe2b58094fc59702f2a8d0 732 Gene3D G3DSA:3.30.365.10 174 273 1.3E-38 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 APT61_RS17855 2aeff13c6cbe2b58094fc59702f2a8d0 732 SMART SM01008 32 138 2.0E-24 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead APT61_RS11025 56c0364178345f2a8a07846e204bd15b 408 Gene3D G3DSA:3.30.70.360 223 325 4.9E-34 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS11025 56c0364178345f2a8a07846e204bd15b 408 PANTHER PTHR32494:SF6 3 405 3.6E-151 T 22-04-2016 APT61_RS11025 56c0364178345f2a8a07846e204bd15b 408 SUPERFAMILY SSF55031 210 325 1.64E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS11025 56c0364178345f2a8a07846e204bd15b 408 SUPERFAMILY SSF53187 335 406 2.13E-82 T 22-04-2016 APT61_RS11025 56c0364178345f2a8a07846e204bd15b 408 SUPERFAMILY SSF53187 2 219 2.13E-82 T 22-04-2016 APT61_RS11025 56c0364178345f2a8a07846e204bd15b 408 Pfam PF01546 Peptidase family M20/M25/M40 77 401 8.9E-33 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APT61_RS11025 56c0364178345f2a8a07846e204bd15b 408 Gene3D G3DSA:3.40.630.10 347 406 7.3E-110 T 22-04-2016 APT61_RS11025 56c0364178345f2a8a07846e204bd15b 408 Gene3D G3DSA:3.40.630.10 2 222 7.3E-110 T 22-04-2016 APT61_RS11025 56c0364178345f2a8a07846e204bd15b 408 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 7 402 1.7E-118 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 APT61_RS11025 56c0364178345f2a8a07846e204bd15b 408 PANTHER PTHR32494 3 405 3.6E-151 T 22-04-2016 APT61_RS11025 56c0364178345f2a8a07846e204bd15b 408 PIRSF PIRSF001235 1 408 6.3E-126 T 22-04-2016 IPR010158 Amidase, hydantoinase/carbamoylase GO:0008152|GO:0016813 APT61_RS18640 5616ed52f6ef6ba939ad601803482448 588 SUPERFAMILY SSF56601 235 563 1.61E-87 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS18640 5616ed52f6ef6ba939ad601803482448 588 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 554 2.3E-82 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APT61_RS18640 5616ed52f6ef6ba939ad601803482448 588 PANTHER PTHR30627:SF1 9 587 2.0E-252 T 22-04-2016 APT61_RS18640 5616ed52f6ef6ba939ad601803482448 588 Pfam PF03717 Penicillin-binding Protein dimerisation domain 70 220 1.7E-20 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APT61_RS18640 5616ed52f6ef6ba939ad601803482448 588 SUPERFAMILY SSF56519 63 233 2.35E-46 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APT61_RS18640 5616ed52f6ef6ba939ad601803482448 588 Gene3D G3DSA:3.40.710.10 242 560 2.0E-86 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS18640 5616ed52f6ef6ba939ad601803482448 588 PANTHER PTHR30627 9 587 2.0E-252 T 22-04-2016 APT61_RS18640 5616ed52f6ef6ba939ad601803482448 588 Gene3D G3DSA:3.90.1310.10 142 241 5.2E-33 T 22-04-2016 APT61_RS19550 967fedac864eb89e0cc0864b48e1ee23 354 Gene3D G3DSA:2.40.50.100 46 77 1.5E-16 T 22-04-2016 APT61_RS19550 967fedac864eb89e0cc0864b48e1ee23 354 Gene3D G3DSA:2.40.50.100 198 232 1.5E-16 T 22-04-2016 APT61_RS19550 967fedac864eb89e0cc0864b48e1ee23 354 SUPERFAMILY SSF111369 44 124 8.76E-11 T 22-04-2016 APT61_RS19550 967fedac864eb89e0cc0864b48e1ee23 354 SUPERFAMILY SSF111369 108 144 3.53E-8 T 22-04-2016 APT61_RS19550 967fedac864eb89e0cc0864b48e1ee23 354 PANTHER PTHR30367:SF6 4 354 4.2E-110 T 22-04-2016 APT61_RS19550 967fedac864eb89e0cc0864b48e1ee23 354 PANTHER PTHR30367 4 354 4.2E-110 T 22-04-2016 APT61_RS19550 967fedac864eb89e0cc0864b48e1ee23 354 Pfam PF13533 Biotin-lipoyl like 44 89 7.1E-13 T 22-04-2016 APT61_RS19550 967fedac864eb89e0cc0864b48e1ee23 354 SUPERFAMILY SSF111369 177 246 3.53E-8 T 22-04-2016 APT61_RS00660 4f7df28ef6eb13dc99958d43276552ad 278 PANTHER PTHR11019 38 276 2.8E-74 T 22-04-2016 APT61_RS00660 4f7df28ef6eb13dc99958d43276552ad 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 264 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS00660 4f7df28ef6eb13dc99958d43276552ad 278 SUPERFAMILY SSF46689 222 272 2.87E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS00660 4f7df28ef6eb13dc99958d43276552ad 278 Pfam PF12833 Helix-turn-helix domain 191 270 1.5E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS00660 4f7df28ef6eb13dc99958d43276552ad 278 Gene3D G3DSA:1.10.10.60 222 272 3.1E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS00660 4f7df28ef6eb13dc99958d43276552ad 278 SUPERFAMILY SSF46689 169 218 9.56E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS00660 4f7df28ef6eb13dc99958d43276552ad 278 Gene3D G3DSA:1.10.10.60 165 221 6.3E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS00660 4f7df28ef6eb13dc99958d43276552ad 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 1.408057E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS00660 4f7df28ef6eb13dc99958d43276552ad 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 1.408057E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS00660 4f7df28ef6eb13dc99958d43276552ad 278 PANTHER PTHR11019:SF11 38 276 2.8E-74 T 22-04-2016 APT61_RS00660 4f7df28ef6eb13dc99958d43276552ad 278 SMART SM00342 185 268 6.4E-33 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS11555 4ecd8ad1f56386219300db847045af62 262 Gene3D G3DSA:3.10.310.10 126 249 2.5E-40 T 22-04-2016 APT61_RS11555 4ecd8ad1f56386219300db847045af62 262 PANTHER PTHR13774 1 259 8.4E-93 T 22-04-2016 APT61_RS11555 4ecd8ad1f56386219300db847045af62 262 PIRSF PIRSF016184 1 261 5.0E-53 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APT61_RS11555 4ecd8ad1f56386219300db847045af62 262 Pfam PF02567 Phenazine biosynthesis-like protein 9 257 6.9E-48 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APT61_RS11555 4ecd8ad1f56386219300db847045af62 262 Gene3D G3DSA:3.10.310.10 3 125 1.1E-43 T 22-04-2016 APT61_RS11555 4ecd8ad1f56386219300db847045af62 262 SUPERFAMILY SSF54506 4 261 7.02E-76 T 22-04-2016 APT61_RS11555 4ecd8ad1f56386219300db847045af62 262 PANTHER PTHR13774:SF17 1 259 8.4E-93 T 22-04-2016 APT61_RS11555 4ecd8ad1f56386219300db847045af62 262 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 236 8.7E-29 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APT61_RS14700 e9195612d136937a13272a89289d0340 542 PIRSF PIRSF002741 2 542 5.0E-116 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APT61_RS14700 e9195612d136937a13272a89289d0340 542 Gene3D G3DSA:3.10.105.10 311 511 7.1E-61 T 22-04-2016 APT61_RS14700 e9195612d136937a13272a89289d0340 542 PANTHER PTHR30290 1 541 1.3E-175 T 22-04-2016 APT61_RS14700 e9195612d136937a13272a89289d0340 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 461 1.6E-89 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS14700 e9195612d136937a13272a89289d0340 542 Gene3D G3DSA:3.40.190.10 159 310 1.2E-54 T 22-04-2016 APT61_RS14700 e9195612d136937a13272a89289d0340 542 PANTHER PTHR30290:SF10 1 541 1.3E-175 T 22-04-2016 APT61_RS14700 e9195612d136937a13272a89289d0340 542 SUPERFAMILY SSF53850 35 539 3.44E-144 T 22-04-2016 APT61_RS12250 e12bc818d74b55ee4262db511939ec06 857 SUPERFAMILY SSF49265 605 719 8.66E-8 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 APT61_RS12250 e12bc818d74b55ee4262db511939ec06 857 PANTHER PTHR36251 1 856 0.0 T 22-04-2016 APT61_RS12250 e12bc818d74b55ee4262db511939ec06 857 SMART SM00060 624 710 0.062 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 APT61_RS12250 e12bc818d74b55ee4262db511939ec06 857 SMART SM00060 728 809 97.0 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 APT61_RS12250 e12bc818d74b55ee4262db511939ec06 857 Gene3D G3DSA:2.60.40.10 731 810 6.8E-4 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS12250 e12bc818d74b55ee4262db511939ec06 857 Gene3D G3DSA:2.60.40.10 624 715 2.7E-6 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS12250 e12bc818d74b55ee4262db511939ec06 857 PANTHER PTHR36251:SF2 1 856 0.0 T 22-04-2016 APT61_RS12250 e12bc818d74b55ee4262db511939ec06 857 Pfam PF13550 Putative phage tail protein 339 499 4.8E-12 T 22-04-2016 IPR032876 Tip attachment protein J APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 SUPERFAMILY SSF52518 474 701 2.94E-98 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 Gene3D G3DSA:3.40.50.920 707 885 5.5E-77 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 Gene3D G3DSA:3.40.50.970 59 469 1.7E-155 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 SUPERFAMILY SSF52922 702 885 2.62E-63 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 PANTHER PTHR11624:SF67 787 869 0.0 T 22-04-2016 APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 PANTHER PTHR11624:SF67 553 768 0.0 T 22-04-2016 APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 PANTHER PTHR11624:SF67 472 535 0.0 T 22-04-2016 APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 PANTHER PTHR11624:SF67 363 452 0.0 T 22-04-2016 APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 PANTHER PTHR11624:SF67 75 294 0.0 T 22-04-2016 APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 PANTHER PTHR11624 787 869 0.0 T 22-04-2016 IPR033247 Transketolase family APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 PANTHER PTHR11624 553 768 0.0 T 22-04-2016 IPR033247 Transketolase family APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 PANTHER PTHR11624 472 535 0.0 T 22-04-2016 IPR033247 Transketolase family APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 PANTHER PTHR11624 363 452 0.0 T 22-04-2016 IPR033247 Transketolase family APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 PANTHER PTHR11624 75 294 0.0 T 22-04-2016 IPR033247 Transketolase family APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 106 294 9.1E-9 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 Gene3D G3DSA:3.40.50.970 473 705 2.9E-119 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 SUPERFAMILY SSF52518 59 466 5.56E-141 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS18490 ce20f38922fe43abfd19ad8cbaecd0e1 887 PIRSF PIRSF000156 1 887 0.0 T 22-04-2016 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PANTHER PTHR11493:SF52 417 806 2.4E-276 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PANTHER PTHR11493:SF52 2 254 2.4E-276 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 SUPERFAMILY SSF51905 148 309 8.91E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 SUPERFAMILY SSF55124 500 639 1.54E-25 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PANTHER PTHR11493 417 806 2.4E-276 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PANTHER PTHR11493 2 254 2.4E-276 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 799 0.0 T 22-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 677 693 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 SUPERFAMILY SSF50022 817 921 4.49E-28 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 288 1.6E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 Gene3D G3DSA:3.50.50.60 3 105 1.0E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 818 918 4.3E-30 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 5.4E-15 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 5.4E-15 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 5.4E-15 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.4E-15 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.4E-15 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 2.2E-8 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 2.2E-8 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.2E-8 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 2.2E-8 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PRINTS PR00397 Sirohaem Fe-binding site signature 634 652 1.1E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 PRINTS PR00397 Sirohaem Fe-binding site signature 677 695 1.1E-6 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 Pfam PF04324 BFD-like [2Fe-2S] binding domain 422 468 3.3E-10 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 Pfam PF13806 Rieske-like [2Fe-2S] domain 817 918 7.8E-27 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 630 765 1.2E-16 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 Gene3D G3DSA:3.50.50.60 106 307 8.9E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 SUPERFAMILY SSF51905 3 192 2.95E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 SUPERFAMILY SSF56014 631 799 9.55E-49 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 Gene3D G3DSA:3.30.413.10 630 766 3.4E-34 T 22-04-2016 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 Gene3D G3DSA:2.102.10.10 817 922 6.1E-32 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APT61_RS09265 4e98174092addce88d2d8e32b5fc25d0 930 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 558 619 8.1E-10 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS21500 0d9a9ad8469a59ad94f98fd9158caa9f 378 SUPERFAMILY SSF111369 198 265 3.53E-14 T 22-04-2016 APT61_RS21500 0d9a9ad8469a59ad94f98fd9158caa9f 378 SUPERFAMILY SSF111369 60 118 3.53E-14 T 22-04-2016 APT61_RS21500 0d9a9ad8469a59ad94f98fd9158caa9f 378 SUPERFAMILY SSF111369 147 165 3.53E-14 T 22-04-2016 APT61_RS21500 0d9a9ad8469a59ad94f98fd9158caa9f 378 Pfam PF00529 HlyD membrane-fusion protein of T1SS 38 367 1.0E-12 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APT61_RS21500 0d9a9ad8469a59ad94f98fd9158caa9f 378 PANTHER PTHR30386:SF7 1 378 5.8E-155 T 22-04-2016 APT61_RS21500 0d9a9ad8469a59ad94f98fd9158caa9f 378 PANTHER PTHR30386 1 378 5.8E-155 T 22-04-2016 APT61_RS21500 0d9a9ad8469a59ad94f98fd9158caa9f 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 301 2.2E-9 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT61_RS21500 0d9a9ad8469a59ad94f98fd9158caa9f 378 Gene3D G3DSA:2.40.50.100 219 242 2.2E-14 T 22-04-2016 APT61_RS21500 0d9a9ad8469a59ad94f98fd9158caa9f 378 Gene3D G3DSA:2.40.50.100 65 96 2.2E-14 T 22-04-2016 APT61_RS14830 80cb5869cf50c857284a4bbf3343d6ba 191 Gene3D G3DSA:3.40.50.360 1 174 1.9E-33 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS14830 80cb5869cf50c857284a4bbf3343d6ba 191 Pfam PF03358 NADPH-dependent FMN reductase 1 140 1.8E-34 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APT61_RS14830 80cb5869cf50c857284a4bbf3343d6ba 191 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 171 3.9E-72 T 22-04-2016 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 APT61_RS14830 80cb5869cf50c857284a4bbf3343d6ba 191 SUPERFAMILY SSF52218 1 162 4.04E-31 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS14830 80cb5869cf50c857284a4bbf3343d6ba 191 PANTHER PTHR30543 1 190 1.8E-52 T 22-04-2016 APT61_RS14830 80cb5869cf50c857284a4bbf3343d6ba 191 PANTHER PTHR30543:SF1 1 190 1.8E-52 T 22-04-2016 APT61_RS01870 566a70be656b4ef638d228e0326b9f24 190 PANTHER PTHR11071:SF265 32 189 1.1E-68 T 22-04-2016 APT61_RS01870 566a70be656b4ef638d228e0326b9f24 190 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 188 6.2E-49 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APT61_RS01870 566a70be656b4ef638d228e0326b9f24 190 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 65 82 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 APT61_RS01870 566a70be656b4ef638d228e0326b9f24 190 SUPERFAMILY SSF50891 26 189 3.65E-57 T 22-04-2016 IPR029000 Cyclophilin-like domain APT61_RS01870 566a70be656b4ef638d228e0326b9f24 190 Gene3D G3DSA:2.40.100.10 27 189 8.3E-55 T 22-04-2016 IPR029000 Cyclophilin-like domain APT61_RS01870 566a70be656b4ef638d228e0326b9f24 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 159 2.0E-10 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APT61_RS01870 566a70be656b4ef638d228e0326b9f24 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 70 82 2.0E-10 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APT61_RS01870 566a70be656b4ef638d228e0326b9f24 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 59 2.0E-10 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 APT61_RS01870 566a70be656b4ef638d228e0326b9f24 190 PANTHER PTHR11071 32 189 1.1E-68 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 APT61_RS13285 b054d2feb274596f4627d4d6c9bd2def 294 SUPERFAMILY SSF74650 8 273 2.45E-68 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APT61_RS13285 b054d2feb274596f4627d4d6c9bd2def 294 Pfam PF01263 Aldose 1-epimerase 28 276 6.9E-45 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 APT61_RS13285 b054d2feb274596f4627d4d6c9bd2def 294 Gene3D G3DSA:2.70.98.10 11 290 7.5E-88 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 APT61_RS13285 b054d2feb274596f4627d4d6c9bd2def 294 PANTHER PTHR11122 1 294 2.2E-125 T 22-04-2016 APT61_RS13285 b054d2feb274596f4627d4d6c9bd2def 294 PIRSF PIRSF016020 8 294 2.7E-56 T 22-04-2016 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 APT61_RS13285 b054d2feb274596f4627d4d6c9bd2def 294 PANTHER PTHR11122:SF14 1 294 2.2E-125 T 22-04-2016 APT61_RS15675 ada1543d669f633056c39223d8ccf930 737 PANTHER PTHR30460:SF0 4 736 0.0 T 22-04-2016 APT61_RS15675 ada1543d669f633056c39223d8ccf930 737 Pfam PF00924 Mechanosensitive ion channel 514 713 2.6E-43 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APT61_RS15675 ada1543d669f633056c39223d8ccf930 737 SUPERFAMILY SSF82861 475 555 2.35E-12 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APT61_RS15675 ada1543d669f633056c39223d8ccf930 737 PANTHER PTHR30460 4 736 0.0 T 22-04-2016 APT61_RS15675 ada1543d669f633056c39223d8ccf930 737 SUPERFAMILY SSF82689 626 720 4.32E-8 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APT61_RS15675 ada1543d669f633056c39223d8ccf930 737 SUPERFAMILY SSF50182 557 615 8.17E-10 T 22-04-2016 IPR010920 LSM domain APT61_RS15675 ada1543d669f633056c39223d8ccf930 737 Gene3D G3DSA:2.30.30.60 575 615 3.3E-8 T 22-04-2016 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 Pfam PF00149 Calcineurin-like phosphoesterase 24 259 2.2E-13 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 Pfam PF02872 5'-nucleotidase, C-terminal domain 355 550 1.3E-25 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 SUPERFAMILY SSF56300 18 353 1.0E-86 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 Gene3D G3DSA:3.90.780.10 360 596 2.0E-45 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 PANTHER PTHR11575 1 646 0.0 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 Gene3D G3DSA:3.60.21.10 12 359 1.1E-96 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 PRINTS PR01607 Apyrase family signature 428 451 1.1E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 PRINTS PR01607 Apyrase family signature 530 549 1.1E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 PRINTS PR01607 Apyrase family signature 283 303 1.1E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 PRINTS PR01607 Apyrase family signature 243 266 1.1E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 PRINTS PR01607 Apyrase family signature 215 232 1.1E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 PRINTS PR01607 Apyrase family signature 22 40 1.1E-31 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 SUPERFAMILY SSF55816 355 597 3.92E-38 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 22 647 0.0 T 22-04-2016 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 ProSitePatterns PS00785 5'-nucleotidase signature 1. 24 36 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APT61_RS20120 a883849d4e839bd134e3b2363a6feadf 647 PANTHER PTHR11575:SF6 1 646 0.0 T 22-04-2016 APT61_RS17950 55cbbcaf4263f3d0bd7c6a13439e9c8f 352 Hamap MF_01113 DNA polymerase IV [dinB]. 1 350 37.544 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS17950 55cbbcaf4263f3d0bd7c6a13439e9c8f 352 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 343 7.1E-8 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS17950 55cbbcaf4263f3d0bd7c6a13439e9c8f 352 Gene3D G3DSA:1.10.150.20 165 237 5.1E-26 T 22-04-2016 APT61_RS17950 55cbbcaf4263f3d0bd7c6a13439e9c8f 352 SUPERFAMILY SSF56672 1 234 9.78E-96 T 22-04-2016 APT61_RS17950 55cbbcaf4263f3d0bd7c6a13439e9c8f 352 Gene3D G3DSA:3.30.1490.100 238 350 3.1E-42 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS17950 55cbbcaf4263f3d0bd7c6a13439e9c8f 352 Pfam PF00817 impB/mucB/samB family 7 154 3.9E-49 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS17950 55cbbcaf4263f3d0bd7c6a13439e9c8f 352 SUPERFAMILY SSF100879 241 350 1.51E-25 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS17950 55cbbcaf4263f3d0bd7c6a13439e9c8f 352 Gene3D G3DSA:3.30.70.270 66 164 7.8E-36 T 22-04-2016 APT61_RS17950 55cbbcaf4263f3d0bd7c6a13439e9c8f 352 PANTHER PTHR11076:SF32 1 348 2.5E-223 T 22-04-2016 APT61_RS17950 55cbbcaf4263f3d0bd7c6a13439e9c8f 352 PANTHER PTHR11076 1 348 2.5E-223 T 22-04-2016 APT61_RS17950 55cbbcaf4263f3d0bd7c6a13439e9c8f 352 Pfam PF11798 IMS family HHH motif 166 197 3.3E-8 T 22-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 APT61_RS08995 1fa25810462796e87ada5140f9a19225 374 ProSitePatterns PS00571 Amidases signature. 100 131 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS08995 1fa25810462796e87ada5140f9a19225 374 Gene3D G3DSA:3.90.1300.10 22 370 5.5E-83 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS08995 1fa25810462796e87ada5140f9a19225 374 SUPERFAMILY SSF75304 23 370 4.19E-88 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS08995 1fa25810462796e87ada5140f9a19225 374 PANTHER PTHR11895 23 368 6.1E-86 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS08995 1fa25810462796e87ada5140f9a19225 374 Pfam PF01425 Amidase 241 361 1.6E-10 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS08995 1fa25810462796e87ada5140f9a19225 374 Pfam PF01425 Amidase 23 178 7.6E-57 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS07125 c667112c1e1c73d57bb16ccef67d7f6c 529 PANTHER PTHR24220 7 411 2.5E-199 T 22-04-2016 APT61_RS07125 c667112c1e1c73d57bb16ccef67d7f6c 529 PANTHER PTHR24220:SF574 7 411 2.5E-199 T 22-04-2016 APT61_RS07125 c667112c1e1c73d57bb16ccef67d7f6c 529 SUPERFAMILY SSF52540 275 525 1.55E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07125 c667112c1e1c73d57bb16ccef67d7f6c 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 265 7.7E-4 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS07125 c667112c1e1c73d57bb16ccef67d7f6c 529 Pfam PF00005 ABC transporter 26 184 4.9E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS07125 c667112c1e1c73d57bb16ccef67d7f6c 529 Pfam PF00005 ABC transporter 302 454 1.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS07125 c667112c1e1c73d57bb16ccef67d7f6c 529 Gene3D G3DSA:3.40.50.300 4 258 9.1E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07125 c667112c1e1c73d57bb16ccef67d7f6c 529 Gene3D G3DSA:3.40.50.300 274 526 1.6E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07125 c667112c1e1c73d57bb16ccef67d7f6c 529 SUPERFAMILY SSF52540 5 256 1.17E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07125 c667112c1e1c73d57bb16ccef67d7f6c 529 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS07125 c667112c1e1c73d57bb16ccef67d7f6c 529 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS07125 c667112c1e1c73d57bb16ccef67d7f6c 529 SMART SM00382 34 234 1.3E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS07125 c667112c1e1c73d57bb16ccef67d7f6c 529 SMART SM00382 311 502 1.2E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS06920 e795bf713ac275dd746c70ec7d07840a 556 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 553 32.796 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APT61_RS06920 e795bf713ac275dd746c70ec7d07840a 556 Pfam PF16582 Middle domain of thiamine pyrophosphate 185 388 2.2E-84 T 22-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APT61_RS06920 e795bf713ac275dd746c70ec7d07840a 556 Gene3D G3DSA:3.40.50.970 344 548 3.9E-33 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS06920 e795bf713ac275dd746c70ec7d07840a 556 PIRSF PIRSF004983 1 556 1.7E-180 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APT61_RS06920 e795bf713ac275dd746c70ec7d07840a 556 Gene3D G3DSA:3.40.50.970 7 175 1.3E-41 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS06920 e795bf713ac275dd746c70ec7d07840a 556 PANTHER PTHR18968:SF114 1 554 1.7E-223 T 22-04-2016 APT61_RS06920 e795bf713ac275dd746c70ec7d07840a 556 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 413 535 4.1E-8 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APT61_RS06920 e795bf713ac275dd746c70ec7d07840a 556 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 132 2.2E-25 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APT61_RS06920 e795bf713ac275dd746c70ec7d07840a 556 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 430 8.2E-138 T 22-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APT61_RS06920 e795bf713ac275dd746c70ec7d07840a 556 SUPERFAMILY SSF52518 366 553 9.82E-35 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS06920 e795bf713ac275dd746c70ec7d07840a 556 PANTHER PTHR18968 1 554 1.7E-223 T 22-04-2016 APT61_RS06920 e795bf713ac275dd746c70ec7d07840a 556 SUPERFAMILY SSF52518 5 175 1.47E-29 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS06905 b548b4949d5e8c6a0ba7d8afe886cd7a 153 Pfam PF13673 Acetyltransferase (GNAT) domain 45 149 5.7E-18 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS06905 b548b4949d5e8c6a0ba7d8afe886cd7a 153 PANTHER PTHR23091:SF275 1 152 7.0E-47 T 22-04-2016 APT61_RS06905 b548b4949d5e8c6a0ba7d8afe886cd7a 153 PANTHER PTHR23091 1 152 7.0E-47 T 22-04-2016 APT61_RS06905 b548b4949d5e8c6a0ba7d8afe886cd7a 153 Gene3D G3DSA:3.40.630.30 2 148 2.1E-45 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS06905 b548b4949d5e8c6a0ba7d8afe886cd7a 153 SUPERFAMILY SSF55729 1 150 1.98E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS15440 a8d36286210f56b9b68cad85957a00db 252 PANTHER PTHR30363:SF8 2 252 1.2E-160 T 22-04-2016 APT61_RS15440 a8d36286210f56b9b68cad85957a00db 252 SUPERFAMILY SSF100950 74 236 3.77E-28 T 22-04-2016 APT61_RS15440 a8d36286210f56b9b68cad85957a00db 252 Pfam PF00455 DeoR C terminal sensor domain 76 231 4.2E-43 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APT61_RS15440 a8d36286210f56b9b68cad85957a00db 252 SMART SM01134 73 234 3.7E-55 T 22-04-2016 APT61_RS15440 a8d36286210f56b9b68cad85957a00db 252 Pfam PF08220 DeoR-like helix-turn-helix domain 8 57 4.5E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS15440 a8d36286210f56b9b68cad85957a00db 252 SMART SM00420 8 57 1.3E-9 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS15440 a8d36286210f56b9b68cad85957a00db 252 PANTHER PTHR30363 2 252 1.2E-160 T 22-04-2016 APT61_RS15440 a8d36286210f56b9b68cad85957a00db 252 Gene3D G3DSA:3.40.50.1360 77 215 3.7E-9 T 22-04-2016 APT61_RS15440 a8d36286210f56b9b68cad85957a00db 252 Gene3D G3DSA:1.10.10.10 3 43 3.3E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15440 a8d36286210f56b9b68cad85957a00db 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APT61_RS15715 1e0c1fcec6c0aeafe33b05dddcf5339c 178 Gene3D G3DSA:2.60.40.1090 28 178 4.7E-41 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APT61_RS15715 1e0c1fcec6c0aeafe33b05dddcf5339c 178 Pfam PF00419 Fimbrial protein 30 177 1.5E-15 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APT61_RS15715 1e0c1fcec6c0aeafe33b05dddcf5339c 178 SUPERFAMILY SSF49401 29 178 9.44E-35 T 22-04-2016 IPR008966 Adhesion domain APT61_RS15715 1e0c1fcec6c0aeafe33b05dddcf5339c 178 PANTHER PTHR33420 1 178 4.4E-41 T 22-04-2016 APT61_RS07280 a3de71f572e9a97a9e7fba07ef64b215 294 PANTHER PTHR11644 18 294 2.4E-158 T 22-04-2016 APT61_RS07280 a3de71f572e9a97a9e7fba07ef64b215 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 61 139 2.8E-11 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 APT61_RS07280 a3de71f572e9a97a9e7fba07ef64b215 294 Gene3D G3DSA:3.40.140.10 189 292 1.2E-23 T 22-04-2016 APT61_RS07280 a3de71f572e9a97a9e7fba07ef64b215 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 284 1.8E-83 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 APT61_RS07280 a3de71f572e9a97a9e7fba07ef64b215 294 SUPERFAMILY SSF53927 1 146 3.35E-38 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APT61_RS07280 a3de71f572e9a97a9e7fba07ef64b215 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 276 1.4E-43 T 22-04-2016 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 APT61_RS07280 a3de71f572e9a97a9e7fba07ef64b215 294 PIRSF PIRSF006334 14 293 1.1E-101 T 22-04-2016 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 APT61_RS07280 a3de71f572e9a97a9e7fba07ef64b215 294 Gene3D G3DSA:3.40.140.10 33 177 4.6E-43 T 22-04-2016 APT61_RS07280 a3de71f572e9a97a9e7fba07ef64b215 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 APT61_RS07280 a3de71f572e9a97a9e7fba07ef64b215 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 292 48.496 T 22-04-2016 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 APT61_RS07280 a3de71f572e9a97a9e7fba07ef64b215 294 SUPERFAMILY SSF53927 152 293 2.34E-44 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 APT61_RS07280 a3de71f572e9a97a9e7fba07ef64b215 294 PANTHER PTHR11644:SF15 18 294 2.4E-158 T 22-04-2016 APT61_RS05840 7b61156572be58575687469f7022a17a 211 SUPERFAMILY SSF56784 6 151 2.42E-8 T 22-04-2016 IPR023214 HAD-like domain APT61_RS05840 7b61156572be58575687469f7022a17a 211 Gene3D G3DSA:3.40.50.1000 4 30 5.8E-6 T 22-04-2016 IPR023214 HAD-like domain APT61_RS05840 7b61156572be58575687469f7022a17a 211 Gene3D G3DSA:3.40.50.1000 100 116 5.8E-6 T 22-04-2016 IPR023214 HAD-like domain APT61_RS05840 7b61156572be58575687469f7022a17a 211 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 2 211 5.8E-127 T 22-04-2016 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APT61_RS05840 7b61156572be58575687469f7022a17a 211 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 192 2.9E-12 T 22-04-2016 APT61_RS05840 7b61156572be58575687469f7022a17a 211 Gene3D G3DSA:3.40.50.1000 117 209 6.9E-5 T 22-04-2016 IPR023214 HAD-like domain APT61_RS06460 53225ff3c64f8981d13b95e5e90529a7 332 PANTHER PTHR11732 13 332 3.2E-178 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS06460 53225ff3c64f8981d13b95e5e90529a7 332 Gene3D G3DSA:3.20.20.100 12 330 1.8E-85 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS06460 53225ff3c64f8981d13b95e5e90529a7 332 Pfam PF00248 Aldo/keto reductase family 28 327 1.1E-65 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS06460 53225ff3c64f8981d13b95e5e90529a7 332 SUPERFAMILY SSF51430 13 328 1.07E-87 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS06460 53225ff3c64f8981d13b95e5e90529a7 332 PANTHER PTHR11732:SF191 13 332 3.2E-178 T 22-04-2016 APT61_RS14015 7da3f53c08fb21ef1a2f6934aa0f2696 194 PIRSF PIRSF006305 1 193 1.1E-44 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APT61_RS14015 7da3f53c08fb21ef1a2f6934aa0f2696 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 185 1.7E-66 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APT61_RS14015 7da3f53c08fb21ef1a2f6934aa0f2696 194 Pfam PF02545 Maf-like protein 4 186 1.8E-47 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APT61_RS14015 7da3f53c08fb21ef1a2f6934aa0f2696 194 PANTHER PTHR11746:SF102 118 187 1.4E-35 T 22-04-2016 APT61_RS14015 7da3f53c08fb21ef1a2f6934aa0f2696 194 Gene3D G3DSA:3.90.950.10 2 189 1.0E-60 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APT61_RS14015 7da3f53c08fb21ef1a2f6934aa0f2696 194 PANTHER PTHR11746 118 187 1.4E-35 T 22-04-2016 APT61_RS14015 7da3f53c08fb21ef1a2f6934aa0f2696 194 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 30.771 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APT61_RS14015 7da3f53c08fb21ef1a2f6934aa0f2696 194 SUPERFAMILY SSF52972 1 185 2.22E-60 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APT61_RS04190 303711f2b2b8734545c90d75e1b84c7d 173 PANTHER PTHR19384:SF73 141 172 8.0E-85 T 22-04-2016 APT61_RS04190 303711f2b2b8734545c90d75e1b84c7d 173 PANTHER PTHR19384:SF73 1 119 8.0E-85 T 22-04-2016 APT61_RS04190 303711f2b2b8734545c90d75e1b84c7d 173 Pfam PF00258 Flavodoxin 5 160 3.1E-25 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APT61_RS04190 303711f2b2b8734545c90d75e1b84c7d 173 Gene3D G3DSA:3.40.50.360 1 168 1.8E-54 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS04190 303711f2b2b8734545c90d75e1b84c7d 173 PANTHER PTHR19384 141 172 8.0E-85 T 22-04-2016 APT61_RS04190 303711f2b2b8734545c90d75e1b84c7d 173 PANTHER PTHR19384 1 119 8.0E-85 T 22-04-2016 APT61_RS04190 303711f2b2b8734545c90d75e1b84c7d 173 PIRSF PIRSF038996 1 172 2.8E-54 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 APT61_RS04190 303711f2b2b8734545c90d75e1b84c7d 173 SUPERFAMILY SSF52218 1 168 2.48E-45 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS04190 303711f2b2b8734545c90d75e1b84c7d 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 APT61_RS04190 303711f2b2b8734545c90d75e1b84c7d 173 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 7.7E-68 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 Gene3D G3DSA:3.10.20.30 3 81 1.6E-7 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 8.3E-15 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 3.7E-11 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 2.0E-9 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 Gene3D G3DSA:2.20.25.90 228 274 7.2E-14 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 SUPERFAMILY SSF50692 814 891 8.36E-12 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 Pfam PF01568 Molydopterin dinucleotide binding domain 828 890 8.6E-6 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 Gene3D G3DSA:3.30.70.20 147 157 1.2E-4 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 Gene3D G3DSA:3.30.70.20 198 227 1.2E-4 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 655 7.0E-204 T 22-04-2016 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 SUPERFAMILY SSF54292 1 77 1.26E-18 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 SMART SM00926 221 275 3.7E-9 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 SMART SM00929 88 128 1.9E-19 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 SUPERFAMILY SSF54862 82 213 5.86E-34 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 PANTHER PTHR11615:SF134 496 680 0.0 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 PANTHER PTHR11615:SF134 739 905 0.0 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 PANTHER PTHR11615:SF134 364 430 0.0 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 PANTHER PTHR11615:SF134 3 320 0.0 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 Gene3D G3DSA:2.40.40.20 816 889 3.2E-10 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 SUPERFAMILY SSF53706 219 688 2.68E-81 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 Pfam PF00384 Molybdopterin oxidoreductase 556 638 2.4E-8 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 Gene3D G3DSA:3.40.50.740 504 687 3.3E-36 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 Gene3D G3DSA:3.40.50.740 278 340 3.3E-36 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 PANTHER PTHR11615 496 680 0.0 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 PANTHER PTHR11615 739 905 0.0 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 PANTHER PTHR11615 364 430 0.0 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 PANTHER PTHR11615 3 320 0.0 T 22-04-2016 APT61_RS06855 fa5f669be830e93730af43ea6a5b3506 908 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 22-04-2016 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 APT61_RS11105 c21086b88f9a902bd0a663098b2c6aef 218 Gene3D G3DSA:1.20.950.20 1 214 4.3E-73 T 22-04-2016 APT61_RS11105 c21086b88f9a902bd0a663098b2c6aef 218 SUPERFAMILY SSF81342 3 209 9.42E-54 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APT61_RS11105 c21086b88f9a902bd0a663098b2c6aef 218 PANTHER PTHR30074 1 217 5.5E-135 T 22-04-2016 APT61_RS11105 c21086b88f9a902bd0a663098b2c6aef 218 PANTHER PTHR30074:SF5 1 217 5.5E-135 T 22-04-2016 APT61_RS11105 c21086b88f9a902bd0a663098b2c6aef 218 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 206 1.1E-69 T 22-04-2016 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 APT61_RS11105 c21086b88f9a902bd0a663098b2c6aef 218 Pfam PF01292 Prokaryotic cytochrome b561 13 186 1.9E-18 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APT61_RS00980 c66d5cfe3eec1f2ce5098c2d9be83530 300 PANTHER PTHR30349:SF17 2 298 1.3E-174 T 22-04-2016 APT61_RS00980 c66d5cfe3eec1f2ce5098c2d9be83530 300 PANTHER PTHR30349 2 298 1.3E-174 T 22-04-2016 APT61_RS00980 c66d5cfe3eec1f2ce5098c2d9be83530 300 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 12 298 1.4E-108 T 22-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 APT61_RS00980 c66d5cfe3eec1f2ce5098c2d9be83530 300 SUPERFAMILY SSF56349 109 294 7.06E-55 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APT61_RS00980 c66d5cfe3eec1f2ce5098c2d9be83530 300 Pfam PF00589 Phage integrase family 115 282 8.0E-53 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS00980 c66d5cfe3eec1f2ce5098c2d9be83530 300 Gene3D G3DSA:1.10.150.130 9 102 1.2E-23 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APT61_RS00980 c66d5cfe3eec1f2ce5098c2d9be83530 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 11 93 4.3E-23 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APT61_RS00980 c66d5cfe3eec1f2ce5098c2d9be83530 300 Gene3D G3DSA:1.10.443.10 117 289 1.4E-52 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS00980 c66d5cfe3eec1f2ce5098c2d9be83530 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 296 36.625 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD APT61_RS00980 c66d5cfe3eec1f2ce5098c2d9be83530 300 SUPERFAMILY SSF47823 9 101 1.92E-10 T 22-04-2016 IPR010998 Integrase, Lambda-type, N-terminal APT61_RS18390 983cfacc838c874e2fe5537974f29ed8 263 PANTHER PTHR20881 1 263 3.9E-186 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APT61_RS18390 983cfacc838c874e2fe5537974f29ed8 263 PANTHER PTHR20881:SF3 1 263 3.9E-186 T 22-04-2016 APT61_RS18390 983cfacc838c874e2fe5537974f29ed8 263 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 1.8E-123 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APT61_RS18390 983cfacc838c874e2fe5537974f29ed8 263 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 257 2.1E-105 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APT61_RS18390 983cfacc838c874e2fe5537974f29ed8 263 Gene3D G3DSA:3.20.20.60 1 263 1.9E-110 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS18390 983cfacc838c874e2fe5537974f29ed8 263 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 262 42.101 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APT61_RS18390 983cfacc838c874e2fe5537974f29ed8 263 PIRSF PIRSF000388 1 263 1.7E-98 T 22-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 APT61_RS18390 983cfacc838c874e2fe5537974f29ed8 263 SUPERFAMILY SSF51621 4 262 4.4E-104 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS15960 2b79d444a5fabad9b07b3f1ce3108639 350 Pfam PF00793 DAHP synthetase I family 36 338 4.9E-111 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APT61_RS15960 2b79d444a5fabad9b07b3f1ce3108639 350 SUPERFAMILY SSF51569 7 348 1.26E-140 T 22-04-2016 APT61_RS15960 2b79d444a5fabad9b07b3f1ce3108639 350 Gene3D G3DSA:3.20.20.70 9 349 2.7E-162 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS15960 2b79d444a5fabad9b07b3f1ce3108639 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 2.4E-181 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APT61_RS15960 2b79d444a5fabad9b07b3f1ce3108639 350 PIRSF PIRSF001361 1 350 2.7E-166 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APT61_RS15960 2b79d444a5fabad9b07b3f1ce3108639 350 PANTHER PTHR21225 1 349 6.6E-273 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APT61_RS15960 2b79d444a5fabad9b07b3f1ce3108639 350 PANTHER PTHR21225:SF7 1 349 6.6E-273 T 22-04-2016 APT61_RS05195 d3a36345b0e5695c5668119ad84dfba3 332 Pfam PF02779 Transketolase, pyrimidine binding domain 31 189 2.9E-33 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APT61_RS05195 d3a36345b0e5695c5668119ad84dfba3 332 Gene3D G3DSA:3.40.50.970 22 202 1.3E-53 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS05195 d3a36345b0e5695c5668119ad84dfba3 332 SUPERFAMILY SSF52922 196 331 7.46E-31 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APT61_RS05195 d3a36345b0e5695c5668119ad84dfba3 332 Gene3D G3DSA:3.40.50.920 203 331 1.3E-34 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APT61_RS05195 d3a36345b0e5695c5668119ad84dfba3 332 Pfam PF02780 Transketolase, C-terminal domain 202 323 9.8E-28 T 22-04-2016 IPR033248 Transketolase, C-terminal domain APT61_RS05195 d3a36345b0e5695c5668119ad84dfba3 332 SMART SM00861 26 190 3.9E-44 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APT61_RS05195 d3a36345b0e5695c5668119ad84dfba3 332 PANTHER PTHR11624:SF2 32 332 3.5E-94 T 22-04-2016 APT61_RS05195 d3a36345b0e5695c5668119ad84dfba3 332 PANTHER PTHR11624 32 332 3.5E-94 T 22-04-2016 IPR033247 Transketolase family APT61_RS05195 d3a36345b0e5695c5668119ad84dfba3 332 SUPERFAMILY SSF52518 9 190 5.4E-48 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 SUPERFAMILY SSF46548 655 691 9.21E-9 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 SUPERFAMILY SSF46548 517 622 9.21E-9 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 Pfam PF13183 4Fe-4S dicluster domain 576 687 2.3E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 Gene3D G3DSA:1.10.1060.10 516 619 1.4E-15 T 22-04-2016 APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 Gene3D G3DSA:1.10.1060.10 654 706 1.4E-15 T 22-04-2016 APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 6.0E-65 T 22-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 SUPERFAMILY SSF56176 18 282 1.87E-53 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 SUPERFAMILY SSF55103 257 543 1.13E-54 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 Gene3D G3DSA:3.30.465.10 110 282 2.6E-42 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 Pfam PF01565 FAD binding domain 52 192 1.4E-37 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 Gene3D G3DSA:3.30.43.10 2 109 2.8E-30 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 PANTHER PTHR11748 247 587 2.9E-189 T 22-04-2016 APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 PANTHER PTHR11748 18 196 2.9E-189 T 22-04-2016 APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 PANTHER PTHR11748:SF35 247 587 2.9E-189 T 22-04-2016 APT61_RS12920 8f018deca61b6174110f046a8226b726 1018 PANTHER PTHR11748:SF35 18 196 2.9E-189 T 22-04-2016 APT61_RS03515 c0c70083b33240cbf1e443b2d751fde1 122 Pfam PF02152 Dihydroneopterin aldolase 4 113 4.8E-31 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APT61_RS03515 c0c70083b33240cbf1e443b2d751fde1 122 TIGRFAM TIGR00526 folB_dom: FolB domain 1 118 9.2E-41 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APT61_RS03515 c0c70083b33240cbf1e443b2d751fde1 122 PANTHER PTHR20941 1 115 4.9E-38 T 22-04-2016 APT61_RS03515 c0c70083b33240cbf1e443b2d751fde1 122 SMART SM00905 4 114 9.6E-47 T 22-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APT61_RS03515 c0c70083b33240cbf1e443b2d751fde1 122 SUPERFAMILY SSF55620 1 115 1.0E-36 T 22-04-2016 APT61_RS03515 c0c70083b33240cbf1e443b2d751fde1 122 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 1.0E-27 T 22-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 APT61_RS03515 c0c70083b33240cbf1e443b2d751fde1 122 Gene3D G3DSA:3.30.1130.10 1 116 5.0E-43 T 22-04-2016 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 Pfam PF00672 HAMP domain 196 263 1.8E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 5.6E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 5.6E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 5.6E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 5.6E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 5.6E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 5.6E-60 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 PANTHER PTHR32089 159 519 8.5E-140 T 22-04-2016 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 SMART SM00304 216 268 2.1E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 Pfam PF02203 Tar ligand binding domain homologue 1 175 2.9E-18 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 Gene3D G3DSA:1.10.287.950 287 488 8.5E-59 T 22-04-2016 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 SUPERFAMILY SSF58104 236 519 2.62E-70 T 22-04-2016 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 515 7.5E-58 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 PANTHER PTHR32089:SF63 159 519 8.5E-140 T 22-04-2016 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 SMART SM00283 269 516 5.7E-85 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS20045 eb0be897a3c30a4bffb9d55f77ffecfe 522 SUPERFAMILY SSF47170 27 172 4.18E-8 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS09395 2ba2442485a7492214693a16eb146c82 215 PANTHER PTHR33508:SF1 4 215 1.0E-101 T 22-04-2016 APT61_RS09395 2ba2442485a7492214693a16eb146c82 215 PANTHER PTHR33508 4 215 1.0E-101 T 22-04-2016 APT61_RS09395 2ba2442485a7492214693a16eb146c82 215 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 3.0E-79 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APT61_RS09395 2ba2442485a7492214693a16eb146c82 215 Pfam PF01914 MarC family integral membrane protein 10 210 3.8E-72 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APT61_RS20700 20098098112185dac5a24c54ad571c7b 182 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 175 33.506 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 APT61_RS20700 20098098112185dac5a24c54ad571c7b 182 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 2 177 1.4E-69 T 22-04-2016 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-5532|UniPathway: UPA00087 APT61_RS20700 20098098112185dac5a24c54ad571c7b 182 PANTHER PTHR23117 1 176 1.2E-82 T 22-04-2016 APT61_RS20700 20098098112185dac5a24c54ad571c7b 182 PANTHER PTHR23117:SF8 1 176 1.2E-82 T 22-04-2016 APT61_RS20700 20098098112185dac5a24c54ad571c7b 182 Gene3D G3DSA:3.40.50.300 2 24 5.2E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20700 20098098112185dac5a24c54ad571c7b 182 Gene3D G3DSA:3.40.50.300 72 148 5.2E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20700 20098098112185dac5a24c54ad571c7b 182 SUPERFAMILY SSF52540 1 177 1.38E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20700 20098098112185dac5a24c54ad571c7b 182 SMART SM00072 1 178 7.8E-27 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit APT61_RS14170 9605de767bb07e602fc968ad282f6d52 349 Pfam PF00581 Rhodanese-like domain 138 232 1.1E-13 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS14170 9605de767bb07e602fc968ad282f6d52 349 Pfam PF12368 Rhodanase C-terminal 246 307 4.1E-19 T 22-04-2016 IPR022111 Rhodanase, C-terminal APT61_RS14170 9605de767bb07e602fc968ad282f6d52 349 PANTHER PTHR22778:SF21 1 322 3.3E-117 T 22-04-2016 APT61_RS14170 9605de767bb07e602fc968ad282f6d52 349 SMART SM00450 136 237 4.3E-24 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS14170 9605de767bb07e602fc968ad282f6d52 349 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 276 38.887 T 22-04-2016 IPR020936 Uncharacterised protein family UPF0176 APT61_RS14170 9605de767bb07e602fc968ad282f6d52 349 PANTHER PTHR22778 1 322 3.3E-117 T 22-04-2016 APT61_RS14170 9605de767bb07e602fc968ad282f6d52 349 Gene3D G3DSA:3.40.250.10 117 242 6.9E-38 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS14170 9605de767bb07e602fc968ad282f6d52 349 SUPERFAMILY SSF52821 118 269 1.23E-31 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS15265 57741df2b65280b7194b337bbbcff495 242 PANTHER PTHR24220:SF495 4 241 3.1E-174 T 22-04-2016 APT61_RS15265 57741df2b65280b7194b337bbbcff495 242 SUPERFAMILY SSF52540 3 232 9.89E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15265 57741df2b65280b7194b337bbbcff495 242 Gene3D G3DSA:3.40.50.300 3 238 1.7E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15265 57741df2b65280b7194b337bbbcff495 242 PANTHER PTHR24220 4 241 3.1E-174 T 22-04-2016 APT61_RS15265 57741df2b65280b7194b337bbbcff495 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS15265 57741df2b65280b7194b337bbbcff495 242 SMART SM00382 27 218 3.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15265 57741df2b65280b7194b337bbbcff495 242 PIRSF PIRSF039085 1 242 2.5E-84 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APT61_RS15265 57741df2b65280b7194b337bbbcff495 242 Pfam PF00005 ABC transporter 20 170 1.7E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS22105 8a3d3b35b82be19aae37f43e2e05bc1b 471 PANTHER PTHR32325 1 471 3.4E-190 T 22-04-2016 APT61_RS22105 8a3d3b35b82be19aae37f43e2e05bc1b 471 Pfam PF01212 Beta-eliminating lyase 49 436 3.0E-93 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 APT61_RS22105 8a3d3b35b82be19aae37f43e2e05bc1b 471 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 471 3.7E-295 T 22-04-2016 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1|UniPathway: UPA00332 APT61_RS22105 8a3d3b35b82be19aae37f43e2e05bc1b 471 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 22-04-2016 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1|UniPathway: UPA00332 APT61_RS22105 8a3d3b35b82be19aae37f43e2e05bc1b 471 Gene3D G3DSA:3.90.1150.10 288 470 5.6E-64 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS22105 8a3d3b35b82be19aae37f43e2e05bc1b 471 Gene3D G3DSA:3.90.1150.10 4 183 6.2E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS22105 8a3d3b35b82be19aae37f43e2e05bc1b 471 PIRSF PIRSF001386 3 471 3.2E-202 T 22-04-2016 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1|UniPathway: UPA00332 APT61_RS22105 8a3d3b35b82be19aae37f43e2e05bc1b 471 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 100.358 T 22-04-2016 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1|UniPathway: UPA00332 APT61_RS22105 8a3d3b35b82be19aae37f43e2e05bc1b 471 SUPERFAMILY SSF53383 6 471 2.33E-126 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS18915 075683340e499b4086b670f86088300a 871 PANTHER PTHR12338:SF5 185 859 2.9E-25 T 22-04-2016 APT61_RS18915 075683340e499b4086b670f86088300a 871 Pfam PF03797 Autotransporter beta-domain 597 850 4.9E-34 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS18915 075683340e499b4086b670f86088300a 871 PANTHER PTHR12338 185 859 2.9E-25 T 22-04-2016 APT61_RS18915 075683340e499b4086b670f86088300a 871 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 366 868 9.9E-80 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 APT61_RS18915 075683340e499b4086b670f86088300a 871 SUPERFAMILY SSF103515 572 871 3.01E-41 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS18915 075683340e499b4086b670f86088300a 871 SMART SM00869 598 860 4.8E-38 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS18915 075683340e499b4086b670f86088300a 871 SUPERFAMILY SSF51126 41 472 2.67E-28 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APT61_RS18915 075683340e499b4086b670f86088300a 871 Gene3D G3DSA:2.40.128.130 562 871 8.2E-60 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS18915 075683340e499b4086b670f86088300a 871 Gene3D G3DSA:2.160.20.20 3 477 4.4E-35 T 22-04-2016 IPR012332 P22 tailspike C-terminal domain-like APT61_RS04330 723c6d360f43e7a65dbdb567251b3777 300 Gene3D G3DSA:1.10.3720.10 22 287 9.4E-62 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS04330 723c6d360f43e7a65dbdb567251b3777 300 SUPERFAMILY SSF161098 24 300 5.42E-71 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS04330 723c6d360f43e7a65dbdb567251b3777 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 294 1.6E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS04330 723c6d360f43e7a65dbdb567251b3777 300 PANTHER PTHR32243 19 300 4.0E-150 T 22-04-2016 APT61_RS04330 723c6d360f43e7a65dbdb567251b3777 300 PANTHER PTHR32243:SF8 19 300 4.0E-150 T 22-04-2016 APT61_RS13805 89f280c29bf73bfba6a816f8a36e7448 456 Gene3D G3DSA:1.20.200.10 120 389 3.3E-90 T 22-04-2016 APT61_RS13805 89f280c29bf73bfba6a816f8a36e7448 456 PANTHER PTHR11444:SF17 4 455 0.0 T 22-04-2016 APT61_RS13805 89f280c29bf73bfba6a816f8a36e7448 456 Pfam PF00206 Lyase 14 312 1.8E-80 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal APT61_RS13805 89f280c29bf73bfba6a816f8a36e7448 456 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APT61_RS13805 89f280c29bf73bfba6a816f8a36e7448 456 Gene3D G3DSA:1.10.275.10 1 119 1.4E-49 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal APT61_RS13805 89f280c29bf73bfba6a816f8a36e7448 456 PANTHER PTHR11444 4 455 0.0 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS13805 89f280c29bf73bfba6a816f8a36e7448 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 3.3E-17 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS13805 89f280c29bf73bfba6a816f8a36e7448 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 3.3E-17 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS13805 89f280c29bf73bfba6a816f8a36e7448 456 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 3.3E-17 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS13805 89f280c29bf73bfba6a816f8a36e7448 456 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 3.3E-17 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS13805 89f280c29bf73bfba6a816f8a36e7448 456 Gene3D G3DSA:1.10.40.30 390 445 1.2E-34 T 22-04-2016 APT61_RS13805 89f280c29bf73bfba6a816f8a36e7448 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 6.4E-53 T 22-04-2016 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APT61_RS13805 89f280c29bf73bfba6a816f8a36e7448 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 1.2E-155 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 APT61_RS13805 89f280c29bf73bfba6a816f8a36e7448 456 SUPERFAMILY SSF48557 10 454 2.04E-106 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 APT61_RS11835 53a1fc05aa7851e474f0f474fc701933 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 1 201 28.22 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 APT61_RS11835 53a1fc05aa7851e474f0f474fc701933 201 PANTHER PTHR10204 1 200 4.1E-40 T 22-04-2016 APT61_RS11835 53a1fc05aa7851e474f0f474fc701933 201 PANTHER PTHR10204:SF16 1 200 4.1E-40 T 22-04-2016 APT61_RS11835 53a1fc05aa7851e474f0f474fc701933 201 SUPERFAMILY SSF52218 1 201 2.02E-49 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS11835 53a1fc05aa7851e474f0f474fc701933 201 Gene3D G3DSA:3.40.50.360 1 200 7.4E-52 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS11835 53a1fc05aa7851e474f0f474fc701933 201 Pfam PF02525 Flavodoxin-like fold 1 199 5.1E-44 T 22-04-2016 IPR003680 Flavodoxin-like fold APT61_RS08485 7c2f301fc0d4a0f266507727b56bf98d 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 271 286 3.7E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APT61_RS08485 7c2f301fc0d4a0f266507727b56bf98d 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 9 31 3.7E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APT61_RS08485 7c2f301fc0d4a0f266507727b56bf98d 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 207 225 3.7E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APT61_RS08485 7c2f301fc0d4a0f266507727b56bf98d 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 301 322 3.7E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APT61_RS08485 7c2f301fc0d4a0f266507727b56bf98d 382 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 227 244 3.7E-43 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APT61_RS08485 7c2f301fc0d4a0f266507727b56bf98d 382 SUPERFAMILY SSF160544 243 350 4.05E-41 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal APT61_RS08485 7c2f301fc0d4a0f266507727b56bf98d 382 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 6 353 1.1E-137 T 22-04-2016 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 APT61_RS08485 7c2f301fc0d4a0f266507727b56bf98d 382 Gene3D G3DSA:3.40.1690.10 217 354 3.9E-64 T 22-04-2016 IPR029025 Type III secretion system substrate exporter, C-terminal APT61_RS08485 7c2f301fc0d4a0f266507727b56bf98d 382 Pfam PF01312 FlhB HrpN YscU SpaS Family 6 346 7.1E-125 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APT61_RS08485 7c2f301fc0d4a0f266507727b56bf98d 382 PANTHER PTHR30531 1 360 3.3E-159 T 22-04-2016 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 APT61_RS08485 7c2f301fc0d4a0f266507727b56bf98d 382 PANTHER PTHR30531:SF0 1 360 3.3E-159 T 22-04-2016 APT61_RS14235 454b7ea80f7e10626d556555db2c52ce 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 4.6E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS14235 454b7ea80f7e10626d556555db2c52ce 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS14235 454b7ea80f7e10626d556555db2c52ce 216 Gene3D G3DSA:1.10.10.10 142 212 1.7E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14235 454b7ea80f7e10626d556555db2c52ce 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS14235 454b7ea80f7e10626d556555db2c52ce 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS14235 454b7ea80f7e10626d556555db2c52ce 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.3E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS14235 454b7ea80f7e10626d556555db2c52ce 216 PANTHER PTHR26402 11 210 5.0E-24 T 22-04-2016 APT61_RS14235 454b7ea80f7e10626d556555db2c52ce 216 SUPERFAMILY SSF46894 148 212 5.78E-19 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS14235 454b7ea80f7e10626d556555db2c52ce 216 SMART SM00421 153 210 6.8E-23 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS14235 454b7ea80f7e10626d556555db2c52ce 216 PANTHER PTHR26402:SF607 11 210 5.0E-24 T 22-04-2016 APT61_RS18800 762156edc662ce334021b6f9c8bc0203 401 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 17 391 6.7E-165 T 22-04-2016 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 APT61_RS18800 762156edc662ce334021b6f9c8bc0203 401 Gene3D G3DSA:1.20.1250.20 16 197 1.7E-18 T 22-04-2016 APT61_RS18800 762156edc662ce334021b6f9c8bc0203 401 Gene3D G3DSA:1.20.1250.20 213 392 1.3E-25 T 22-04-2016 APT61_RS18800 762156edc662ce334021b6f9c8bc0203 401 SUPERFAMILY SSF103473 13 390 1.44E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS18800 762156edc662ce334021b6f9c8bc0203 401 PANTHER PTHR23535:SF2 2 401 8.1E-194 T 22-04-2016 APT61_RS18800 762156edc662ce334021b6f9c8bc0203 401 Pfam PF07690 Major Facilitator Superfamily 19 344 1.9E-26 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS18800 762156edc662ce334021b6f9c8bc0203 401 PANTHER PTHR23535 2 401 8.1E-194 T 22-04-2016 APT61_RS06485 2b32489581959b7063473645027cf4cc 568 Gene3D G3DSA:3.30.450.40 226 357 4.5E-5 T 22-04-2016 IPR029016 GAF domain-like APT61_RS06485 2b32489581959b7063473645027cf4cc 568 Pfam PF06580 Histidine kinase 359 438 5.2E-25 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 APT61_RS06485 2b32489581959b7063473645027cf4cc 568 PANTHER PTHR34220:SF2 1 558 2.8E-298 T 22-04-2016 APT61_RS06485 2b32489581959b7063473645027cf4cc 568 Gene3D G3DSA:3.30.565.10 411 552 3.7E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS06485 2b32489581959b7063473645027cf4cc 568 Pfam PF07694 5TMR of 5TMR-LYT 29 192 1.6E-44 T 22-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 APT61_RS06485 2b32489581959b7063473645027cf4cc 568 PANTHER PTHR34220 1 558 2.8E-298 T 22-04-2016 APT61_RS06485 2b32489581959b7063473645027cf4cc 568 SUPERFAMILY SSF55781 227 345 5.05E-8 T 22-04-2016 IPR029016 GAF domain-like APT61_RS06485 2b32489581959b7063473645027cf4cc 568 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 456 553 2.6E-7 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS06485 2b32489581959b7063473645027cf4cc 568 SMART SM00387 452 554 2.2E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS06485 2b32489581959b7063473645027cf4cc 568 SUPERFAMILY SSF55874 414 551 4.71E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS02850 4bc45001ec8e0031293b522f8659a027 414 Pfam PF03222 Tryptophan/tyrosine permease family 10 402 5.4E-151 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APT61_RS02850 4bc45001ec8e0031293b522f8659a027 414 PANTHER PTHR32195 1 410 1.2E-206 T 22-04-2016 APT61_RS02850 4bc45001ec8e0031293b522f8659a027 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 6.4E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS02850 4bc45001ec8e0031293b522f8659a027 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 6.4E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS02850 4bc45001ec8e0031293b522f8659a027 414 PRINTS PR00166 Aromatic amino acid permease signature 45 64 6.4E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS02850 4bc45001ec8e0031293b522f8659a027 414 PRINTS PR00166 Aromatic amino acid permease signature 18 41 6.4E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS02850 4bc45001ec8e0031293b522f8659a027 414 PRINTS PR00166 Aromatic amino acid permease signature 90 110 6.4E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS02850 4bc45001ec8e0031293b522f8659a027 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 6.4E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS02850 4bc45001ec8e0031293b522f8659a027 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 6.4E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS02850 4bc45001ec8e0031293b522f8659a027 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 6.4E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS02850 4bc45001ec8e0031293b522f8659a027 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 6.4E-105 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS02850 4bc45001ec8e0031293b522f8659a027 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 15 395 2.1E-158 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 APT61_RS02850 4bc45001ec8e0031293b522f8659a027 414 PANTHER PTHR32195:SF18 1 410 1.2E-206 T 22-04-2016 APT61_RS02850 4bc45001ec8e0031293b522f8659a027 414 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 25 41 - T 22-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site APT61_RS06840 647f7a8fe880d7b95158a188d5060213 596 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 101 156 1.0E-23 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 APT61_RS06840 647f7a8fe880d7b95158a188d5060213 596 SUPERFAMILY SSF56762 221 596 1.03E-117 T 22-04-2016 IPR029014 NiFe hydrogenase-like APT61_RS06840 647f7a8fe880d7b95158a188d5060213 596 PANTHER PTHR11993 143 591 2.6E-302 T 22-04-2016 APT61_RS06840 647f7a8fe880d7b95158a188d5060213 596 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 211 596 1.1E-175 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 APT61_RS06840 647f7a8fe880d7b95158a188d5060213 596 Gene3D G3DSA:1.10.645.10 438 581 1.9E-11 T 22-04-2016 IPR029014 NiFe hydrogenase-like APT61_RS06840 647f7a8fe880d7b95158a188d5060213 596 Gene3D G3DSA:1.10.645.10 213 436 7.3E-33 T 22-04-2016 IPR029014 NiFe hydrogenase-like APT61_RS06840 647f7a8fe880d7b95158a188d5060213 596 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 45 172 3.2E-43 T 22-04-2016 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 APT61_RS06840 647f7a8fe880d7b95158a188d5060213 596 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 248 259 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 APT61_RS06840 647f7a8fe880d7b95158a188d5060213 596 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 207 596 41.799 T 22-04-2016 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 APT61_RS06840 647f7a8fe880d7b95158a188d5060213 596 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 12 596 72.465 T 22-04-2016 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 APT61_RS06840 647f7a8fe880d7b95158a188d5060213 596 PANTHER PTHR11993:SF28 143 591 2.6E-302 T 22-04-2016 APT61_RS06840 647f7a8fe880d7b95158a188d5060213 596 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 46 174 4.7E-39 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 APT61_RS06840 647f7a8fe880d7b95158a188d5060213 596 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 325 596 8.6E-102 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 APT61_RS06840 647f7a8fe880d7b95158a188d5060213 596 SUPERFAMILY SSF143243 21 225 5.23E-58 T 22-04-2016 APT61_RS00145 d329948555ff9525bff488cf9e3f933a 302 SMART SM00563 88 215 2.3E-14 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APT61_RS00145 d329948555ff9525bff488cf9e3f933a 302 Pfam PF01553 Acyltransferase 75 212 5.2E-13 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APT61_RS00145 d329948555ff9525bff488cf9e3f933a 302 SUPERFAMILY SSF69593 28 287 3.27E-26 T 22-04-2016 APT61_RS00145 d329948555ff9525bff488cf9e3f933a 302 PANTHER PTHR10983:SF15 1 301 3.3E-142 T 22-04-2016 APT61_RS00145 d329948555ff9525bff488cf9e3f933a 302 PANTHER PTHR10983 1 301 3.3E-142 T 22-04-2016 APT61_RS04915 05d9d044b8d4bd4405230663d92464d5 171 Gene3D G3DSA:3.30.1360.80 1 170 1.1E-75 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APT61_RS04915 05d9d044b8d4bd4405230663d92464d5 171 PIRSF PIRSF006160 1 162 3.7E-66 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APT61_RS04915 05d9d044b8d4bd4405230663d92464d5 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 3.2E-62 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APT61_RS04915 05d9d044b8d4bd4405230663d92464d5 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 2.0E-79 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APT61_RS04915 05d9d044b8d4bd4405230663d92464d5 171 SUPERFAMILY SSF63411 4 162 2.29E-66 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APT61_RS04915 05d9d044b8d4bd4405230663d92464d5 171 PANTHER PTHR35799 2 169 1.5E-103 T 22-04-2016 APT61_RS04915 05d9d044b8d4bd4405230663d92464d5 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 3.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APT61_RS04915 05d9d044b8d4bd4405230663d92464d5 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 3.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APT61_RS04915 05d9d044b8d4bd4405230663d92464d5 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 3.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APT61_RS04915 05d9d044b8d4bd4405230663d92464d5 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 3.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APT61_RS04915 05d9d044b8d4bd4405230663d92464d5 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 3.1E-50 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APT61_RS04915 05d9d044b8d4bd4405230663d92464d5 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 35.866 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 Gene3D G3DSA:3.40.50.720 1 233 5.6E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 PANTHER PTHR24322 2 129 2.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 PANTHER PTHR24322 146 178 2.9E-45 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 2.3E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 2.3E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 2.3E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 2.3E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 2.3E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 177 8.7E-6 T 22-04-2016 APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 7.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 7.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 7.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 SUPERFAMILY SSF51735 1 233 6.77E-73 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06100 9a0941f2dd13a46e0fddac5c60605837 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 4 232 1.7E-57 T 22-04-2016 APT61_RS02885 0a7841e2b03dd2756454415dc77cf172 142 Gene3D G3DSA:2.30.110.10 8 139 1.0E-8 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS02885 0a7841e2b03dd2756454415dc77cf172 142 PIRSF PIRSF009554 1 142 1.8E-57 T 22-04-2016 IPR011194 Uncharacterised protein family UPF0306 APT61_RS02885 0a7841e2b03dd2756454415dc77cf172 142 SUPERFAMILY SSF50475 2 139 8.21E-17 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS02885 0a7841e2b03dd2756454415dc77cf172 142 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 3 140 33.995 T 22-04-2016 IPR011194 Uncharacterised protein family UPF0306 APT61_RS13590 a2c85b96d067b315370180cfbc3eaf02 115 Pfam PF05939 Phage minor tail protein 4 113 1.7E-27 T 22-04-2016 IPR010265 Bacteriophage lambda, GpM, minor tail APT61_RS02935 b20f67a0a006d3bd185643a51a174b3b 256 Gene3D G3DSA:3.20.20.60 6 255 1.1E-79 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS02935 b20f67a0a006d3bd185643a51a174b3b 256 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 245 1.9E-62 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 APT61_RS02935 b20f67a0a006d3bd185643a51a174b3b 256 Hamap MF_01291 5-keto-4-deoxy-D-glucarate aldolase [garL]. 1 256 69.243 T 22-04-2016 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20|UniPathway: UPA00565 APT61_RS02935 b20f67a0a006d3bd185643a51a174b3b 256 PANTHER PTHR30502 1 255 3.0E-209 T 22-04-2016 APT61_RS02935 b20f67a0a006d3bd185643a51a174b3b 256 SUPERFAMILY SSF51621 4 255 6.91E-84 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS02935 b20f67a0a006d3bd185643a51a174b3b 256 PANTHER PTHR30502:SF4 1 255 3.0E-209 T 22-04-2016 APT61_RS02935 b20f67a0a006d3bd185643a51a174b3b 256 TIGRFAM TIGR03239 GarL: 2-dehydro-3-deoxyglucarate aldolase 8 256 9.6E-146 T 22-04-2016 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20|UniPathway: UPA00565 APT61_RS10085 94791e1df2e455e896815b40b2f2809a 198 TIGRFAM TIGR02287 PaaY: phenylacetic acid degradation protein PaaY 3 195 1.8E-110 T 22-04-2016 IPR011974 Phenylacetic acid degradation protein PaaY UniPathway: UPA00930 APT61_RS10085 94791e1df2e455e896815b40b2f2809a 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 121 1.7E-7 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS10085 94791e1df2e455e896815b40b2f2809a 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 17 45 1.6E-4 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS10085 94791e1df2e455e896815b40b2f2809a 198 SUPERFAMILY SSF51161 3 168 5.41E-44 T 22-04-2016 IPR011004 Trimeric LpxA-like APT61_RS10085 94791e1df2e455e896815b40b2f2809a 198 Gene3D G3DSA:2.160.10.10 3 169 1.3E-42 T 22-04-2016 APT61_RS10085 94791e1df2e455e896815b40b2f2809a 198 PANTHER PTHR13061 7 185 2.2E-59 T 22-04-2016 APT61_RS01135 1086b288835718e1a0074de9d8caf2f9 204 SUPERFAMILY SSF54211 3 131 1.25E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS01135 1086b288835718e1a0074de9d8caf2f9 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 22-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site APT61_RS01135 1086b288835718e1a0074de9d8caf2f9 204 Gene3D G3DSA:3.30.70.240 135 204 2.7E-28 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain APT61_RS01135 1086b288835718e1a0074de9d8caf2f9 204 SUPERFAMILY SSF54980 136 203 9.71E-17 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APT61_RS01135 1086b288835718e1a0074de9d8caf2f9 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 203 2.8E-82 T 22-04-2016 IPR015796 Impact family, bacterial/archaeal APT61_RS01135 1086b288835718e1a0074de9d8caf2f9 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 6.1E-26 T 22-04-2016 IPR001498 Impact, N-terminal APT61_RS01135 1086b288835718e1a0074de9d8caf2f9 204 Gene3D G3DSA:3.30.230.30 6 132 1.2E-42 T 22-04-2016 IPR001498 Impact, N-terminal APT61_RS01135 1086b288835718e1a0074de9d8caf2f9 204 Pfam PF09186 Domain of unknown function (DUF1949) 142 195 2.4E-14 T 22-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal APT61_RS01135 1086b288835718e1a0074de9d8caf2f9 204 PANTHER PTHR16301 1 200 2.9E-59 T 22-04-2016 IPR023582 Impact family APT61_RS02050 a7c1cb0ac78ffddf91376f585077f821 157 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 75 85 1.8E-11 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APT61_RS02050 a7c1cb0ac78ffddf91376f585077f821 157 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 98 113 1.8E-11 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APT61_RS02050 a7c1cb0ac78ffddf91376f585077f821 157 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 18 35 1.8E-11 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APT61_RS02050 a7c1cb0ac78ffddf91376f585077f821 157 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 86 97 1.8E-11 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APT61_RS02050 a7c1cb0ac78ffddf91376f585077f821 157 PANTHER PTHR30487 22 147 2.0E-25 T 22-04-2016 APT61_RS02050 a7c1cb0ac78ffddf91376f585077f821 157 Pfam PF01478 Type IV leader peptidase family 11 117 2.1E-15 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 APT61_RS02050 a7c1cb0ac78ffddf91376f585077f821 157 PANTHER PTHR30487:SF0 22 147 2.0E-25 T 22-04-2016 APT61_RS05660 f5075941cfd5aa181b99dcbedaf3fc72 326 PANTHER PTHR11079:SF73 6 323 5.6E-159 T 22-04-2016 APT61_RS05660 f5075941cfd5aa181b99dcbedaf3fc72 326 SUPERFAMILY SSF55174 17 68 1.06E-11 T 22-04-2016 APT61_RS05660 f5075941cfd5aa181b99dcbedaf3fc72 326 Pfam PF00849 RNA pseudouridylate synthase 92 242 1.8E-29 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS05660 f5075941cfd5aa181b99dcbedaf3fc72 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS05660 f5075941cfd5aa181b99dcbedaf3fc72 326 SUPERFAMILY SSF55120 78 322 6.17E-77 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS05660 f5075941cfd5aa181b99dcbedaf3fc72 326 SMART SM00363 18 83 1.0E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS05660 f5075941cfd5aa181b99dcbedaf3fc72 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 313 6.6E-107 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS05660 f5075941cfd5aa181b99dcbedaf3fc72 326 Gene3D G3DSA:3.10.290.10 18 68 6.1E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS05660 f5075941cfd5aa181b99dcbedaf3fc72 326 Pfam PF01479 S4 domain 18 65 1.6E-11 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS05660 f5075941cfd5aa181b99dcbedaf3fc72 326 PANTHER PTHR11079 6 323 5.6E-159 T 22-04-2016 APT61_RS21440 abcfc883ce9224179863e69341e284ca 418 Gene3D G3DSA:3.90.1150.10 268 407 1.8E-15 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS21440 abcfc883ce9224179863e69341e284ca 418 Gene3D G3DSA:3.40.640.10 61 267 2.3E-40 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS21440 abcfc883ce9224179863e69341e284ca 418 SUPERFAMILY SSF53383 16 409 4.81E-58 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS21440 abcfc883ce9224179863e69341e284ca 418 PANTHER PTHR11751 11 416 3.3E-189 T 22-04-2016 APT61_RS21440 abcfc883ce9224179863e69341e284ca 418 PANTHER PTHR11751:SF419 11 416 3.3E-189 T 22-04-2016 APT61_RS21440 abcfc883ce9224179863e69341e284ca 418 Pfam PF00155 Aminotransferase class I and II 66 400 6.4E-22 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS10545 f4bc1afe63baf02f1c73a6f1dc5445fe 257 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 24 250 4.6E-55 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS10545 f4bc1afe63baf02f1c73a6f1dc5445fe 257 PANTHER PTHR18966:SF237 23 249 6.7E-55 T 22-04-2016 APT61_RS10545 f4bc1afe63baf02f1c73a6f1dc5445fe 257 SMART SM00062 23 252 3.1E-60 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS10545 f4bc1afe63baf02f1c73a6f1dc5445fe 257 Gene3D G3DSA:3.40.190.10 211 250 7.9E-38 T 22-04-2016 APT61_RS10545 f4bc1afe63baf02f1c73a6f1dc5445fe 257 Gene3D G3DSA:3.40.190.10 22 109 7.9E-38 T 22-04-2016 APT61_RS10545 f4bc1afe63baf02f1c73a6f1dc5445fe 257 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 46 59 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APT61_RS10545 f4bc1afe63baf02f1c73a6f1dc5445fe 257 SUPERFAMILY SSF53850 1 250 1.15E-59 T 22-04-2016 APT61_RS10545 f4bc1afe63baf02f1c73a6f1dc5445fe 257 PANTHER PTHR18966 23 249 6.7E-55 T 22-04-2016 APT61_RS10545 f4bc1afe63baf02f1c73a6f1dc5445fe 257 Gene3D G3DSA:3.40.190.10 111 207 5.1E-25 T 22-04-2016 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 Pfam PF00890 FAD binding domain 9 405 4.0E-118 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 SUPERFAMILY SSF46977 452 588 1.01E-46 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.4E-5 T 22-04-2016 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.4E-5 T 22-04-2016 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 Gene3D G3DSA:3.90.700.10 243 349 1.5E-40 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 Gene3D G3DSA:1.20.58.100 434 547 5.3E-38 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 5.3E-36 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 Gene3D G3DSA:3.50.50.60 351 425 1.7E-119 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 Gene3D G3DSA:3.50.50.60 6 242 1.7E-119 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 Gene3D G3DSA:4.10.80.40 548 588 2.7E-21 T 22-04-2016 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 SUPERFAMILY SSF56425 236 356 4.64E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 PIRSF PIRSF000171 1 579 5.9E-46 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 8.4E-241 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 PANTHER PTHR11632:SF5 1 573 0.0 T 22-04-2016 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 SUPERFAMILY SSF51905 359 443 2.49E-75 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 SUPERFAMILY SSF51905 4 259 2.49E-75 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 PANTHER PTHR11632 1 573 0.0 T 22-04-2016 APT61_RS16115 1da61d6b013e084ac2f5578c41da4d9b 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 4.9E-276 T 22-04-2016 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APT61_RS20635 5f9d33e49b4384c850cb3f0be4e3e788 111 Pfam PF03831 PhnA domain 44 111 4.3E-34 T 22-04-2016 IPR013988 PhnA protein, C-terminal APT61_RS20635 5f9d33e49b4384c850cb3f0be4e3e788 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 1.7E-62 T 22-04-2016 IPR004624 PhnA protein APT61_RS20635 5f9d33e49b4384c850cb3f0be4e3e788 111 Gene3D G3DSA:2.20.25.10 1 40 5.4E-21 T 22-04-2016 APT61_RS20635 5f9d33e49b4384c850cb3f0be4e3e788 111 Pfam PF08274 PhnA Zinc-Ribbon 2 30 5.3E-16 T 22-04-2016 IPR013987 PhnA protein, N-terminal APT61_RS20635 5f9d33e49b4384c850cb3f0be4e3e788 111 PANTHER PTHR30305 1 111 3.1E-88 T 22-04-2016 APT61_RS20635 5f9d33e49b4384c850cb3f0be4e3e788 111 Gene3D G3DSA:2.30.30.40 42 110 2.2E-38 T 22-04-2016 APT61_RS20635 5f9d33e49b4384c850cb3f0be4e3e788 111 SUPERFAMILY SSF57783 1 36 3.23E-14 T 22-04-2016 APT61_RS20635 5f9d33e49b4384c850cb3f0be4e3e788 111 SUPERFAMILY SSF82057 39 110 2.24E-29 T 22-04-2016 APT61_RS12120 283b15c4a9560614afa39599b6212569 371 SUPERFAMILY SSF50182 186 250 1.86E-13 T 22-04-2016 IPR010920 LSM domain APT61_RS12120 283b15c4a9560614afa39599b6212569 371 SUPERFAMILY SSF82861 100 184 4.45E-11 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 APT61_RS12120 283b15c4a9560614afa39599b6212569 371 SUPERFAMILY SSF82689 252 351 1.44E-13 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 APT61_RS12120 283b15c4a9560614afa39599b6212569 371 Pfam PF00924 Mechanosensitive ion channel 144 342 8.3E-49 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 APT61_RS12120 283b15c4a9560614afa39599b6212569 371 Gene3D G3DSA:3.30.70.100 254 341 2.5E-6 T 22-04-2016 APT61_RS12120 283b15c4a9560614afa39599b6212569 371 PANTHER PTHR30566 21 353 4.5E-65 T 22-04-2016 APT61_RS12120 283b15c4a9560614afa39599b6212569 371 PANTHER PTHR30566:SF5 21 353 4.5E-65 T 22-04-2016 APT61_RS12120 283b15c4a9560614afa39599b6212569 371 Gene3D G3DSA:2.30.30.60 201 250 7.5E-15 T 22-04-2016 APT61_RS06315 64b2ef3f7545c1cec117f401d987d9b8 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 273 6.0E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS06315 64b2ef3f7545c1cec117f401d987d9b8 291 Gene3D G3DSA:1.10.3720.10 19 281 9.5E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS06315 64b2ef3f7545c1cec117f401d987d9b8 291 SUPERFAMILY SSF161098 28 267 4.58E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS06315 64b2ef3f7545c1cec117f401d987d9b8 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 2 275 2.6E-112 T 22-04-2016 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 APT61_RS06315 64b2ef3f7545c1cec117f401d987d9b8 291 PANTHER PTHR30406:SF1 1 283 4.2E-158 T 22-04-2016 APT61_RS06315 64b2ef3f7545c1cec117f401d987d9b8 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 1.2E-111 T 22-04-2016 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 APT61_RS06315 64b2ef3f7545c1cec117f401d987d9b8 291 PANTHER PTHR30406 1 283 4.2E-158 T 22-04-2016 APT61_RS07310 3141c3082e2dc679b095e0d993940bdf 277 SUPERFAMILY SSF63520 170 273 4.58E-27 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS07310 3141c3082e2dc679b095e0d993940bdf 277 SMART SM01061 1 59 6.8E-29 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APT61_RS07310 3141c3082e2dc679b095e0d993940bdf 277 PANTHER PTHR30185 1 275 6.6E-126 T 22-04-2016 APT61_RS07310 3141c3082e2dc679b095e0d993940bdf 277 Pfam PF03123 CAT RNA binding domain 1 54 2.8E-23 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APT61_RS07310 3141c3082e2dc679b095e0d993940bdf 277 ProSitePatterns PS00654 PRD domain signature. 97 109 - T 22-04-2016 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 APT61_RS07310 3141c3082e2dc679b095e0d993940bdf 277 SUPERFAMILY SSF50151 1 54 8.76E-18 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APT61_RS07310 3141c3082e2dc679b095e0d993940bdf 277 SUPERFAMILY SSF63520 59 165 1.83E-25 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS07310 3141c3082e2dc679b095e0d993940bdf 277 Gene3D G3DSA:1.10.1790.10 65 162 7.0E-27 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS07310 3141c3082e2dc679b095e0d993940bdf 277 Gene3D G3DSA:1.10.1790.10 169 275 3.0E-32 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS07310 3141c3082e2dc679b095e0d993940bdf 277 Gene3D G3DSA:2.30.24.10 1 54 6.3E-25 T 22-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 APT61_RS07310 3141c3082e2dc679b095e0d993940bdf 277 Pfam PF00874 PRD domain 86 161 7.7E-20 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS07310 3141c3082e2dc679b095e0d993940bdf 277 Pfam PF00874 PRD domain 179 271 9.0E-20 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS07310 3141c3082e2dc679b095e0d993940bdf 277 PANTHER PTHR30185:SF2 1 275 6.6E-126 T 22-04-2016 APT61_RS08490 dc40f504d4685ed25e0b437a3b0eef1d 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 1.0E-283 T 22-04-2016 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 APT61_RS08490 dc40f504d4685ed25e0b437a3b0eef1d 692 PIRSF PIRSF005419 12 692 6.0E-244 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APT61_RS08490 dc40f504d4685ed25e0b437a3b0eef1d 692 Pfam PF00771 FHIPEP family 31 680 3.6E-270 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APT61_RS08490 dc40f504d4685ed25e0b437a3b0eef1d 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 22-04-2016 IPR025505 FHIPEP conserved site APT61_RS08490 dc40f504d4685ed25e0b437a3b0eef1d 692 PANTHER PTHR30161 2 692 0.0 T 22-04-2016 APT61_RS08490 dc40f504d4685ed25e0b437a3b0eef1d 692 PANTHER PTHR30161:SF1 2 692 0.0 T 22-04-2016 APT61_RS08490 dc40f504d4685ed25e0b437a3b0eef1d 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 5.9E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APT61_RS08490 dc40f504d4685ed25e0b437a3b0eef1d 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 5.9E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APT61_RS08490 dc40f504d4685ed25e0b437a3b0eef1d 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 5.9E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APT61_RS08490 dc40f504d4685ed25e0b437a3b0eef1d 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 5.9E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APT61_RS08490 dc40f504d4685ed25e0b437a3b0eef1d 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 5.9E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APT61_RS08490 dc40f504d4685ed25e0b437a3b0eef1d 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 5.9E-57 T 22-04-2016 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 APT61_RS08320 f32c59285e8fd1b3edc286e2bbdc2c5c 79 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 79 1.8E-33 T 22-04-2016 IPR019620 Putative metal-binding protein APT61_RS08320 f32c59285e8fd1b3edc286e2bbdc2c5c 79 Pfam PF10678 Protein of unknown function (DUF2492) 3 78 7.8E-34 T 22-04-2016 IPR019620 Putative metal-binding protein APT61_RS21870 8c87bffbe8c166bb68f6eb1c7b67e23d 139 Gene3D G3DSA:3.40.630.30 39 139 3.5E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS21870 8c87bffbe8c166bb68f6eb1c7b67e23d 139 SUPERFAMILY SSF55729 17 138 8.1E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS21870 8c87bffbe8c166bb68f6eb1c7b67e23d 139 Pfam PF00583 Acetyltransferase (GNAT) family 55 117 3.0E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS14600 752236665c41420b2d3bcfc626859939 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 134 156 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APT61_RS14600 752236665c41420b2d3bcfc626859939 225 PANTHER PTHR11749:SF3 1 215 5.2E-75 T 22-04-2016 APT61_RS14600 752236665c41420b2d3bcfc626859939 225 Gene3D G3DSA:3.20.20.70 4 220 1.1E-68 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS14600 752236665c41420b2d3bcfc626859939 225 PANTHER PTHR11749 1 215 5.2E-75 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APT61_RS14600 752236665c41420b2d3bcfc626859939 225 SUPERFAMILY SSF51366 4 218 2.44E-55 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APT61_RS14600 752236665c41420b2d3bcfc626859939 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 198 1.7E-61 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 APT61_RS21215 286c585a7db4faa2a7c94595110eeadd 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 22-04-2016 APT61_RS21215 286c585a7db4faa2a7c94595110eeadd 142 SUPERFAMILY SSF46906 68 141 1.57E-25 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APT61_RS21215 286c585a7db4faa2a7c94595110eeadd 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 7.4E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal APT61_RS21215 286c585a7db4faa2a7c94595110eeadd 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.634 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APT61_RS21215 286c585a7db4faa2a7c94595110eeadd 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 5.2E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APT61_RS21215 286c585a7db4faa2a7c94595110eeadd 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 2.3E-65 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 APT61_RS21215 286c585a7db4faa2a7c94595110eeadd 142 Gene3D G3DSA:1.10.10.250 73 141 1.8E-30 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 APT61_RS21215 286c585a7db4faa2a7c94595110eeadd 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 APT61_RS21215 286c585a7db4faa2a7c94595110eeadd 142 SMART SM00649 9 141 4.6E-84 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APT61_RS21215 286c585a7db4faa2a7c94595110eeadd 142 Gene3D G3DSA:3.30.1550.10 2 72 9.6E-38 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal APT61_RS21215 286c585a7db4faa2a7c94595110eeadd 142 SUPERFAMILY SSF54747 3 73 5.1E-30 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal APT61_RS21215 286c585a7db4faa2a7c94595110eeadd 142 PANTHER PTHR11661 1 142 7.8E-75 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 APT61_RS17075 f25d1ab13f2061a88cd085744769f7e8 264 Pfam PF01963 TraB family 30 264 5.5E-39 T 22-04-2016 IPR002816 Pheromone shutdown, TraB APT61_RS17075 f25d1ab13f2061a88cd085744769f7e8 264 PANTHER PTHR40590 1 264 3.5E-97 T 22-04-2016 APT61_RS03125 5e30e188cd41c28a64b7341820489f53 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 33 303 2.9E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS03125 5e30e188cd41c28a64b7341820489f53 327 PANTHER PTHR32196 1 327 4.6E-128 T 22-04-2016 APT61_RS03125 5e30e188cd41c28a64b7341820489f53 327 PANTHER PTHR32196:SF24 1 327 4.6E-128 T 22-04-2016 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 314 39.198 T 22-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 PANTHER PTHR11540:SF3 1 313 2.0E-123 T 22-04-2016 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 311 1.5E-24 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 SUPERFAMILY SSF56327 147 311 2.88E-49 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 PIRSF PIRSF000102 2 313 1.1E-97 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 PANTHER PTHR11540 1 313 2.0E-123 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 Gene3D G3DSA:3.90.110.10 148 313 5.9E-52 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 SUPERFAMILY SSF51735 3 146 9.11E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 307 8.1E-111 T 22-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 22-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 2.6E-38 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 2.6E-38 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 2.6E-38 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 2.6E-38 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 2.6E-38 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 146 8.4E-34 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 APT61_RS11495 69a232afb26e135af602b2d2d0df26b5 314 Gene3D G3DSA:3.40.50.720 1 147 2.3E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS12880 e503156a9c3facd444dc84483e296836 337 PANTHER PTHR30582 34 310 9.9E-156 T 22-04-2016 APT61_RS12880 e503156a9c3facd444dc84483e296836 337 Pfam PF01476 LysM domain 42 86 1.2E-5 T 22-04-2016 IPR018392 LysM domain APT61_RS12880 e503156a9c3facd444dc84483e296836 337 SMART SM00257 41 86 0.0022 T 22-04-2016 IPR018392 LysM domain APT61_RS12880 e503156a9c3facd444dc84483e296836 337 SUPERFAMILY SSF141523 96 233 1.24E-26 T 22-04-2016 APT61_RS12880 e503156a9c3facd444dc84483e296836 337 Gene3D G3DSA:2.40.440.10 91 235 3.6E-32 T 22-04-2016 APT61_RS12880 e503156a9c3facd444dc84483e296836 337 PANTHER PTHR30582:SF7 34 310 9.9E-156 T 22-04-2016 APT61_RS12880 e503156a9c3facd444dc84483e296836 337 Gene3D G3DSA:3.10.350.10 40 87 1.0E-4 T 22-04-2016 IPR018392 LysM domain APT61_RS12880 e503156a9c3facd444dc84483e296836 337 Pfam PF03734 L,D-transpeptidase catalytic domain 98 233 8.7E-17 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APT61_RS11460 5719e21c7cfc986a21af38ca57117c6e 331 PANTHER PTHR10799 203 329 9.4E-30 T 22-04-2016 APT61_RS11460 5719e21c7cfc986a21af38ca57117c6e 331 PANTHER PTHR10799 1 134 9.4E-30 T 22-04-2016 APT61_RS11460 5719e21c7cfc986a21af38ca57117c6e 331 Pfam PF05230 MASE2 domain 2 87 1.1E-29 T 22-04-2016 IPR007894 MASE2 APT61_RS11460 5719e21c7cfc986a21af38ca57117c6e 331 SMART SM00267 159 331 6.2E-60 T 22-04-2016 IPR000160 GGDEF domain APT61_RS11460 5719e21c7cfc986a21af38ca57117c6e 331 PANTHER PTHR10799:SF750 203 329 9.4E-30 T 22-04-2016 APT61_RS11460 5719e21c7cfc986a21af38ca57117c6e 331 PANTHER PTHR10799:SF750 1 134 9.4E-30 T 22-04-2016 APT61_RS11460 5719e21c7cfc986a21af38ca57117c6e 331 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 166 330 9.4E-50 T 22-04-2016 IPR000160 GGDEF domain APT61_RS11460 5719e21c7cfc986a21af38ca57117c6e 331 Pfam PF00990 Diguanylate cyclase, GGDEF domain 170 327 1.5E-46 T 22-04-2016 IPR000160 GGDEF domain APT61_RS11460 5719e21c7cfc986a21af38ca57117c6e 331 SUPERFAMILY SSF55073 178 329 2.62E-45 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS11460 5719e21c7cfc986a21af38ca57117c6e 331 Gene3D G3DSA:3.30.70.270 172 329 4.8E-50 T 22-04-2016 APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 PANTHER PTHR22942 1 337 1.8E-206 T 22-04-2016 APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 Gene3D G3DSA:3.30.250.10 273 328 3.7E-28 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 SUPERFAMILY SSF52540 6 269 1.44E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 SMART SM00382 59 230 3.8E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 PANTHER PTHR22942:SF1 1 337 1.8E-206 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 Gene3D G3DSA:3.40.50.300 28 269 2.4E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 PRINTS PR00142 RecA protein signature 299 316 5.5E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 PRINTS PR00142 RecA protein signature 129 158 5.5E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 PRINTS PR00142 RecA protein signature 95 124 5.5E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 PRINTS PR00142 RecA protein signature 212 240 5.5E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 PRINTS PR00142 RecA protein signature 245 274 5.5E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 PRINTS PR00142 RecA protein signature 167 196 5.5E-84 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 SUPERFAMILY SSF54752 272 327 2.35E-21 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 1.5E-172 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 Hamap MF_00268 Protein RecA [recA]. 7 331 51.037 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 Pfam PF00154 recA bacterial DNA recombination protein 9 270 3.0E-142 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 APT61_RS04855 30be03c4ab8d2daf4aa7c9d236ac3a78 352 ProSitePatterns PS00321 recA signature. 215 223 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 APT61_RS21610 35311827a157af7aa4133e314942b1ee 348 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 1.5E-168 T 22-04-2016 IPR011910 Lipopolysaccharide heptosyltransferase II GO:0009103|GO:0016757 KEGG: 00231+2.-.-.-|UniPathway: UPA00958 APT61_RS21610 35311827a157af7aa4133e314942b1ee 348 PANTHER PTHR30160 1 347 2.2E-118 T 22-04-2016 APT61_RS21610 35311827a157af7aa4133e314942b1ee 348 Gene3D G3DSA:3.40.50.2000 1 145 3.3E-59 T 22-04-2016 APT61_RS21610 35311827a157af7aa4133e314942b1ee 348 Gene3D G3DSA:3.40.50.2000 169 343 3.3E-54 T 22-04-2016 APT61_RS21610 35311827a157af7aa4133e314942b1ee 348 SUPERFAMILY SSF53756 1 343 1.26E-101 T 22-04-2016 APT61_RS21610 35311827a157af7aa4133e314942b1ee 348 PANTHER PTHR30160:SF7 1 347 2.2E-118 T 22-04-2016 APT61_RS21610 35311827a157af7aa4133e314942b1ee 348 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 2.8E-88 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 APT61_RS01785 ba62070462fb54fb352d8569139136fd 156 Pfam PF05137 Fimbrial assembly protein (PilN) 77 124 3.1E-5 T 22-04-2016 IPR007813 Fimbrial assembly PilN APT61_RS04795 186d2cb8a38353fa511b5d687b7b0301 474 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 368 376 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site APT61_RS04795 186d2cb8a38353fa511b5d687b7b0301 474 Pfam PF00232 Glycosyl hydrolase family 1 3 470 1.3E-131 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04795 186d2cb8a38353fa511b5d687b7b0301 474 Gene3D G3DSA:3.20.20.80 3 473 1.9E-150 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS04795 186d2cb8a38353fa511b5d687b7b0301 474 PANTHER PTHR10353:SF74 1 474 0.0 T 22-04-2016 APT61_RS04795 186d2cb8a38353fa511b5d687b7b0301 474 PANTHER PTHR10353 1 474 0.0 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04795 186d2cb8a38353fa511b5d687b7b0301 474 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site APT61_RS04795 186d2cb8a38353fa511b5d687b7b0301 474 SUPERFAMILY SSF51445 2 471 7.15E-159 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS04795 186d2cb8a38353fa511b5d687b7b0301 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 376 2.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04795 186d2cb8a38353fa511b5d687b7b0301 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 2.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04795 186d2cb8a38353fa511b5d687b7b0301 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 302 316 2.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04795 186d2cb8a38353fa511b5d687b7b0301 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 2.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS04795 186d2cb8a38353fa511b5d687b7b0301 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 447 2.2E-15 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS13725 69c7929f9fb9369e06c8922e1035a55f 139 Gene3D G3DSA:1.10.10.10 17 71 1.5E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS13725 69c7929f9fb9369e06c8922e1035a55f 139 Pfam PF06069 PerC transcriptional activator 90 138 4.4E-6 T 22-04-2016 IPR024684 Transcriptional activator PerC/bacteriophage SfV Orf40 APT61_RS13725 69c7929f9fb9369e06c8922e1035a55f 139 SUPERFAMILY SSF46785 16 79 1.18E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS12535 8c692311da2f12b5a0ef69b4015439f4 71 SUPERFAMILY SSF68989 1 70 4.05E-21 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA APT61_RS12535 8c692311da2f12b5a0ef69b4015439f4 71 Gene3D G3DSA:1.20.1280.40 1 70 1.7E-30 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA APT61_RS12535 8c692311da2f12b5a0ef69b4015439f4 71 Pfam PF05321 Haemolysin expression modulating protein 8 68 4.6E-26 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA APT61_RS18450 dd425cd0d06870a3ed42a3e0291affe0 285 Gene3D G3DSA:2.30.140.10 6 56 2.1E-20 T 22-04-2016 APT61_RS18450 dd425cd0d06870a3ed42a3e0291affe0 285 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 9.7E-122 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 APT61_RS18450 dd425cd0d06870a3ed42a3e0291affe0 285 Pfam PF01564 Spermine/spermidine synthase 7 239 6.7E-88 T 22-04-2016 APT61_RS18450 dd425cd0d06870a3ed42a3e0291affe0 285 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 22-04-2016 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 APT61_RS18450 dd425cd0d06870a3ed42a3e0291affe0 285 Gene3D G3DSA:3.40.50.150 57 283 6.1E-84 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS18450 dd425cd0d06870a3ed42a3e0291affe0 285 SUPERFAMILY SSF53335 7 283 5.09E-90 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS18450 dd425cd0d06870a3ed42a3e0291affe0 285 PANTHER PTHR11558 7 283 1.6E-125 T 22-04-2016 APT61_RS18450 dd425cd0d06870a3ed42a3e0291affe0 285 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 39.05 T 22-04-2016 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|UniPathway: UPA00248 APT61_RS06195 0c5e7c7d6922b82c9bd570c7f1b35ca3 344 PIRSF PIRSF026343 9 344 2.9E-138 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC APT61_RS06195 0c5e7c7d6922b82c9bd570c7f1b35ca3 344 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 343 38.36 T 22-04-2016 IPR014524 Outer membrane protein assembly factor BamC APT61_RS06195 0c5e7c7d6922b82c9bd570c7f1b35ca3 344 Pfam PF06804 NlpB/DapX lipoprotein 40 342 9.8E-111 T 22-04-2016 IPR010653 NlpB/DapX lipoprotein APT61_RS21680 193551c334537d6ab32739c47fce1a80 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.2E-27 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS21680 193551c334537d6ab32739c47fce1a80 78 PANTHER PTHR13528 1 68 1.3E-33 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 APT61_RS21680 193551c334537d6ab32739c47fce1a80 78 Gene3D G3DSA:2.30.170.40 2 77 1.6E-35 T 22-04-2016 APT61_RS21680 193551c334537d6ab32739c47fce1a80 78 SUPERFAMILY SSF143800 2 77 1.26E-29 T 22-04-2016 APT61_RS21680 193551c334537d6ab32739c47fce1a80 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.212 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS21680 193551c334537d6ab32739c47fce1a80 78 Pfam PF00830 Ribosomal L28 family 3 62 1.6E-25 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 APT61_RS16040 cf330438255a9349d678c13f1ebc4ba9 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 7.0E-39 T 22-04-2016 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 APT61_RS16040 cf330438255a9349d678c13f1ebc4ba9 142 PANTHER PTHR30558:SF7 1 141 1.0E-68 T 22-04-2016 APT61_RS16040 cf330438255a9349d678c13f1ebc4ba9 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 3.5E-24 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APT61_RS16040 cf330438255a9349d678c13f1ebc4ba9 142 PANTHER PTHR30558 1 141 1.0E-68 T 22-04-2016 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.4E-5 T 22-04-2016 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 1.4E-5 T 22-04-2016 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 SUPERFAMILY SSF56425 227 358 1.79E-42 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 22-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 22-04-2016 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 PANTHER PTHR11632 3 584 0.0 T 22-04-2016 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 Pfam PF00890 FAD binding domain 7 397 2.1E-114 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 SUPERFAMILY SSF46977 444 589 2.88E-45 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 PANTHER PTHR11632:SF50 3 584 0.0 T 22-04-2016 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 4.1E-38 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 SUPERFAMILY SSF51905 361 416 2.91E-72 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 SUPERFAMILY SSF51905 3 250 2.91E-72 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 PIRSF PIRSF000171 1 576 6.7E-43 T 22-04-2016 IPR030664 Succinate dehydrogenase/fumarate reductase, alpha/adenylylsulphate reductase subunit APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 Gene3D G3DSA:4.10.80.40 543 577 2.7E-18 T 22-04-2016 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.4E-10 T 22-04-2016 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.4E-10 T 22-04-2016 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 Gene3D G3DSA:1.20.58.100 427 537 2.4E-38 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 7.3E-247 T 22-04-2016 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 Gene3D G3DSA:3.90.700.10 234 352 1.2E-35 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 Gene3D G3DSA:3.50.50.60 353 416 8.2E-106 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS20425 8befdbe9dd9b4dbe7f2b9334dd50b431 596 Gene3D G3DSA:3.50.50.60 4 233 8.2E-106 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS02515 1a805235c66b457515cb6c3df764d9f8 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 103 194 1.1E-11 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal APT61_RS02515 1a805235c66b457515cb6c3df764d9f8 212 PANTHER PTHR11260:SF44 9 208 2.8E-122 T 22-04-2016 APT61_RS02515 1a805235c66b457515cb6c3df764d9f8 212 PANTHER PTHR11260 9 208 2.8E-122 T 22-04-2016 APT61_RS02515 1a805235c66b457515cb6c3df764d9f8 212 Gene3D G3DSA:1.20.1050.10 102 208 2.2E-16 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS02515 1a805235c66b457515cb6c3df764d9f8 212 SUPERFAMILY SSF47616 82 208 5.83E-28 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS02515 1a805235c66b457515cb6c3df764d9f8 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 1.8E-19 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APT61_RS02515 1a805235c66b457515cb6c3df764d9f8 212 Gene3D G3DSA:3.40.30.10 7 101 4.8E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS02515 1a805235c66b457515cb6c3df764d9f8 212 SUPERFAMILY SSF52833 7 90 7.09E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS14460 88289023e396f1385c8ef8a9f6269b84 164 Pfam PF00174 Oxidoreductase molybdopterin binding domain 69 138 5.0E-8 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 APT61_RS14460 88289023e396f1385c8ef8a9f6269b84 164 Gene3D G3DSA:3.90.420.10 68 138 7.3E-8 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 APT61_RS14460 88289023e396f1385c8ef8a9f6269b84 164 SUPERFAMILY SSF56524 42 159 1.44E-18 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 APT61_RS19180 84d8eb8e14b40489672acce55617bb15 205 PANTHER PTHR34606:SF3 45 205 2.1E-62 T 22-04-2016 APT61_RS19180 84d8eb8e14b40489672acce55617bb15 205 Pfam PF04972 BON domain 59 126 4.1E-20 T 22-04-2016 IPR007055 BON domain APT61_RS19180 84d8eb8e14b40489672acce55617bb15 205 Pfam PF04972 BON domain 139 205 3.2E-19 T 22-04-2016 IPR007055 BON domain APT61_RS19180 84d8eb8e14b40489672acce55617bb15 205 PANTHER PTHR34606 45 205 2.1E-62 T 22-04-2016 APT61_RS19180 84d8eb8e14b40489672acce55617bb15 205 SMART SM00749 64 127 5.7E-12 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria APT61_RS19180 84d8eb8e14b40489672acce55617bb15 205 SMART SM00749 143 205 1.8E-9 T 22-04-2016 IPR014004 Transport-associated and nodulation domain, bacteria APT61_RS19055 2ef4dcbfb9919403d83219cba20273d8 428 Pfam PF14821 Threonine synthase N terminus 8 80 1.6E-12 T 22-04-2016 IPR029144 Threonine synthase, N-terminal APT61_RS19055 2ef4dcbfb9919403d83219cba20273d8 428 PANTHER PTHR10314:SF1 53 425 6.6E-144 T 22-04-2016 APT61_RS19055 2ef4dcbfb9919403d83219cba20273d8 428 PANTHER PTHR10314:SF1 25 36 6.6E-144 T 22-04-2016 APT61_RS19055 2ef4dcbfb9919403d83219cba20273d8 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 369 3.7E-24 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS19055 2ef4dcbfb9919403d83219cba20273d8 428 TIGRFAM TIGR00260 thrC: threonine synthase 52 397 9.3E-126 T 22-04-2016 IPR004450 Threonine synthase-like APT61_RS19055 2ef4dcbfb9919403d83219cba20273d8 428 SUPERFAMILY SSF53686 1 425 3.14E-132 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS19055 2ef4dcbfb9919403d83219cba20273d8 428 Gene3D G3DSA:3.90.1380.10 1 84 3.7E-21 T 22-04-2016 IPR029144 Threonine synthase, N-terminal APT61_RS19055 2ef4dcbfb9919403d83219cba20273d8 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 APT61_RS19055 2ef4dcbfb9919403d83219cba20273d8 428 Gene3D G3DSA:3.40.50.1100 196 319 1.3E-52 T 22-04-2016 APT61_RS19055 2ef4dcbfb9919403d83219cba20273d8 428 Gene3D G3DSA:3.40.50.1100 324 401 2.2E-15 T 22-04-2016 APT61_RS19055 2ef4dcbfb9919403d83219cba20273d8 428 Gene3D G3DSA:3.40.50.1100 106 195 1.2E-12 T 22-04-2016 APT61_RS19055 2ef4dcbfb9919403d83219cba20273d8 428 PANTHER PTHR10314 53 425 6.6E-144 T 22-04-2016 APT61_RS19055 2ef4dcbfb9919403d83219cba20273d8 428 PANTHER PTHR10314 25 36 6.6E-144 T 22-04-2016 APT61_RS07400 c0d04721735060172834d67ce3a4161b 239 Gene3D G3DSA:2.20.25.10 214 239 2.5E-6 T 22-04-2016 APT61_RS07400 c0d04721735060172834d67ce3a4161b 239 SMART SM00448 2 112 1.9E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS07400 c0d04721735060172834d67ce3a4161b 239 SUPERFAMILY SSF52172 1 123 1.38E-32 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS07400 c0d04721735060172834d67ce3a4161b 239 SMART SM00850 143 238 5.7E-26 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APT61_RS07400 c0d04721735060172834d67ce3a4161b 239 Pfam PF04397 LytTr DNA-binding domain 144 237 8.8E-24 T 22-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 APT61_RS07400 c0d04721735060172834d67ce3a4161b 239 PANTHER PTHR26402:SF524 2 117 8.6E-36 T 22-04-2016 APT61_RS07400 c0d04721735060172834d67ce3a4161b 239 Pfam PF00072 Response regulator receiver domain 4 112 6.6E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS07400 c0d04721735060172834d67ce3a4161b 239 Gene3D G3DSA:3.40.50.2300 1 121 1.3E-32 T 22-04-2016 APT61_RS07400 c0d04721735060172834d67ce3a4161b 239 PANTHER PTHR26402 2 117 8.6E-36 T 22-04-2016 APT61_RS07400 c0d04721735060172834d67ce3a4161b 239 Gene3D G3DSA:2.40.50.40 135 201 2.7E-10 T 22-04-2016 APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.14 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.3E-88 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 SUPERFAMILY SSF48150 2 208 2.04E-72 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 PANTHER PTHR10359:SF18 1 210 2.5E-91 T 22-04-2016 APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.2E-18 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 Gene3D G3DSA:1.10.340.30 22 122 2.6E-32 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 PIRSF PIRSF001435 1 211 6.3E-50 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 Gene3D G3DSA:1.10.1670.10 123 208 7.9E-36 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 PANTHER PTHR10359 1 210 2.5E-91 T 22-04-2016 APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 SMART SM00525 186 206 1.4E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 4.9E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 APT61_RS12575 e3a3536bce8cd10d4b74d98baa3c0a90 211 SMART SM00478 38 185 2.2E-53 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APT61_RS16280 4271fc4735c6b4dec4555f874a9cc104 250 SUPERFAMILY SSF56784 1 247 2.89E-64 T 22-04-2016 IPR023214 HAD-like domain APT61_RS16280 4271fc4735c6b4dec4555f874a9cc104 250 Pfam PF13242 HAD-hyrolase-like 174 246 5.7E-20 T 22-04-2016 APT61_RS16280 4271fc4735c6b4dec4555f874a9cc104 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 6.3E-63 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA APT61_RS16280 4271fc4735c6b4dec4555f874a9cc104 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 2.3E-23 T 22-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA APT61_RS16280 4271fc4735c6b4dec4555f874a9cc104 250 PANTHER PTHR19288:SF40 3 247 7.8E-167 T 22-04-2016 APT61_RS16280 4271fc4735c6b4dec4555f874a9cc104 250 Gene3D G3DSA:3.40.50.10410 83 173 2.4E-31 T 22-04-2016 IPR023215 Nitrophenylphosphatase-like domain APT61_RS16280 4271fc4735c6b4dec4555f874a9cc104 250 PANTHER PTHR19288 3 247 7.8E-167 T 22-04-2016 APT61_RS16280 4271fc4735c6b4dec4555f874a9cc104 250 Gene3D G3DSA:3.40.50.1000 1 79 4.3E-40 T 22-04-2016 IPR023214 HAD-like domain APT61_RS16280 4271fc4735c6b4dec4555f874a9cc104 250 Gene3D G3DSA:3.40.50.1000 174 247 4.3E-40 T 22-04-2016 IPR023214 HAD-like domain APT61_RS04210 e06b0212091c9c4d33d6303061833e7d 293 Gene3D G3DSA:1.20.58.410 2 44 8.4E-9 T 22-04-2016 APT61_RS04210 e06b0212091c9c4d33d6303061833e7d 293 SMART SM00937 13 123 1.6E-58 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APT61_RS04210 e06b0212091c9c4d33d6303061833e7d 293 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 173 189 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APT61_RS04210 e06b0212091c9c4d33d6303061833e7d 293 Pfam PF03462 PCRF domain 6 147 2.4E-48 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APT61_RS04210 e06b0212091c9c4d33d6303061833e7d 293 Gene3D G3DSA:3.30.160.20 156 234 9.4E-37 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain APT61_RS04210 e06b0212091c9c4d33d6303061833e7d 293 SUPERFAMILY SSF75620 1 292 6.02E-136 T 22-04-2016 APT61_RS04210 e06b0212091c9c4d33d6303061833e7d 293 Pfam PF00472 RF-1 domain 157 265 4.2E-39 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APT61_RS04210 e06b0212091c9c4d33d6303061833e7d 293 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 291 4.9E-155 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APT61_RS04210 e06b0212091c9c4d33d6303061833e7d 293 PANTHER PTHR11075 1 290 1.8E-147 T 22-04-2016 APT61_RS04210 e06b0212091c9c4d33d6303061833e7d 293 PANTHER PTHR11075:SF6 1 290 1.8E-147 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 PANTHER PTHR11455:SF18 1 469 4.3E-211 T 22-04-2016 APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 Pfam PF00875 DNA photolyase 5 168 2.7E-48 T 22-04-2016 IPR006050 DNA photolyase, N-terminal APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 341 360 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 Gene3D G3DSA:1.10.579.10 283 468 3.3E-78 T 22-04-2016 APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 PRINTS PR00147 DNA photolyase signature 341 359 4.3E-32 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 PRINTS PR00147 DNA photolyase signature 321 337 4.3E-32 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 PRINTS PR00147 DNA photolyase signature 380 394 4.3E-32 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 PRINTS PR00147 DNA photolyase signature 143 159 4.3E-32 T 22-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 SUPERFAMILY SSF48173 190 469 8.9E-108 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 Pfam PF03441 FAD binding domain of DNA photolyase 271 465 9.0E-83 T 22-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 Gene3D G3DSA:3.40.50.620 2 147 1.6E-47 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 Gene3D G3DSA:1.25.40.80 148 282 8.9E-43 T 22-04-2016 APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 321 333 - T 22-04-2016 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 SUPERFAMILY SSF52425 3 186 1.26E-55 T 22-04-2016 IPR006050 DNA photolyase, N-terminal APT61_RS16175 43f88c2ef6fdc66f16f20fb83de9505f 470 PANTHER PTHR11455 1 469 4.3E-211 T 22-04-2016 APT61_RS03070 b2f7521860282b3d0897e57161e13e28 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 494 9.3E-154 T 22-04-2016 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 APT61_RS03070 b2f7521860282b3d0897e57161e13e28 495 PANTHER PTHR30536:SF5 1 495 2.0E-273 T 22-04-2016 APT61_RS03070 b2f7521860282b3d0897e57161e13e28 495 PANTHER PTHR30536 1 495 2.0E-273 T 22-04-2016 APT61_RS03070 b2f7521860282b3d0897e57161e13e28 495 Pfam PF08666 SAF domain 10 81 6.8E-13 T 22-04-2016 IPR013974 SAF domain APT61_RS03070 b2f7521860282b3d0897e57161e13e28 495 SMART SM00858 10 81 5.5E-15 T 22-04-2016 IPR013974 SAF domain APT61_RS01995 b5fb88b8c8f4ddb01dfecb0e64d71178 272 PANTHER PTHR10516 20 26 6.1E-51 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APT61_RS01995 b5fb88b8c8f4ddb01dfecb0e64d71178 272 PANTHER PTHR10516 136 253 6.1E-51 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APT61_RS01995 b5fb88b8c8f4ddb01dfecb0e64d71178 272 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 34 153 1.2E-34 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APT61_RS01995 b5fb88b8c8f4ddb01dfecb0e64d71178 272 Gene3D G3DSA:1.10.287.460 31 135 9.4E-42 T 22-04-2016 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 APT61_RS01995 b5fb88b8c8f4ddb01dfecb0e64d71178 272 SUPERFAMILY SSF54534 42 250 1.1E-63 T 22-04-2016 APT61_RS01995 b5fb88b8c8f4ddb01dfecb0e64d71178 272 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 161 247 2.4E-28 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APT61_RS01995 b5fb88b8c8f4ddb01dfecb0e64d71178 272 Gene3D G3DSA:3.10.50.40 136 250 4.4E-44 T 22-04-2016 APT61_RS05650 0be1d7b3b1d9b4ed732b5b2cd798716f 113 SUPERFAMILY SSF69754 3 109 2.75E-33 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APT61_RS05650 0be1d7b3b1d9b4ed732b5b2cd798716f 113 PANTHER PTHR33231 1 113 7.8E-70 T 22-04-2016 APT61_RS05650 0be1d7b3b1d9b4ed732b5b2cd798716f 113 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 91 6.5E-22 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APT61_RS05650 0be1d7b3b1d9b4ed732b5b2cd798716f 113 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 1.5E-34 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APT61_RS05650 0be1d7b3b1d9b4ed732b5b2cd798716f 113 PANTHER PTHR33231:SF3 1 113 7.8E-70 T 22-04-2016 APT61_RS05650 0be1d7b3b1d9b4ed732b5b2cd798716f 113 Gene3D G3DSA:3.30.160.100 3 91 1.1E-32 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 APT61_RS18595 0f65020b26832a97cc99a4eb0bb5c8a8 278 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 28 257 25.242 T 22-04-2016 IPR026579 Cell division protein FtsQ GO:0000917 APT61_RS18595 0f65020b26832a97cc99a4eb0bb5c8a8 278 Pfam PF08478 POTRA domain, FtsQ-type 59 128 9.4E-21 T 22-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type APT61_RS18595 0f65020b26832a97cc99a4eb0bb5c8a8 278 PANTHER PTHR35851 11 274 1.5E-83 T 22-04-2016 APT61_RS18595 0f65020b26832a97cc99a4eb0bb5c8a8 278 PANTHER PTHR35851:SF1 11 274 1.5E-83 T 22-04-2016 APT61_RS18595 0f65020b26832a97cc99a4eb0bb5c8a8 278 Pfam PF03799 Cell division protein FtsQ 132 249 5.0E-25 T 22-04-2016 IPR005548 Cell division protein FtsQ/DivIB APT61_RS09645 da203483d5c0930a2c4be210b4d2041e 330 PANTHER PTHR24220:SF514 5 328 3.8E-219 T 22-04-2016 APT61_RS09645 da203483d5c0930a2c4be210b4d2041e 330 SUPERFAMILY SSF52540 3 265 6.86E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09645 da203483d5c0930a2c4be210b4d2041e 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 5.0E-16 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS09645 da203483d5c0930a2c4be210b4d2041e 330 Gene3D G3DSA:3.40.50.300 2 262 1.3E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09645 da203483d5c0930a2c4be210b4d2041e 330 SMART SM00382 32 245 2.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS09645 da203483d5c0930a2c4be210b4d2041e 330 PANTHER PTHR24220 5 328 3.8E-219 T 22-04-2016 APT61_RS09645 da203483d5c0930a2c4be210b4d2041e 330 Pfam PF00005 ABC transporter 24 187 2.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS09645 da203483d5c0930a2c4be210b4d2041e 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.1E-19 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS00990 497aaeb7fb3887c714b6e40fe494fa7f 720 Gene3D G3DSA:1.10.10.160 114 190 4.4E-26 T 22-04-2016 IPR013986 DExx box DNA helicase domain APT61_RS00990 497aaeb7fb3887c714b6e40fe494fa7f 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 1.5E-75 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APT61_RS00990 497aaeb7fb3887c714b6e40fe494fa7f 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 5.1E-76 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APT61_RS00990 497aaeb7fb3887c714b6e40fe494fa7f 720 Gene3D G3DSA:1.10.486.10 388 541 8.4E-52 T 22-04-2016 APT61_RS00990 497aaeb7fb3887c714b6e40fe494fa7f 720 SUPERFAMILY SSF52540 7 642 2.08E-181 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00990 497aaeb7fb3887c714b6e40fe494fa7f 720 Gene3D G3DSA:3.40.50.300 552 642 6.3E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00990 497aaeb7fb3887c714b6e40fe494fa7f 720 Gene3D G3DSA:3.40.50.300 286 387 6.3E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00990 497aaeb7fb3887c714b6e40fe494fa7f 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 22-04-2016 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 APT61_RS00990 497aaeb7fb3887c714b6e40fe494fa7f 720 PANTHER PTHR11070:SF7 6 718 6.2E-257 T 22-04-2016 APT61_RS00990 497aaeb7fb3887c714b6e40fe494fa7f 720 PANTHER PTHR11070 6 718 6.2E-257 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APT61_RS00990 497aaeb7fb3887c714b6e40fe494fa7f 720 Gene3D G3DSA:3.40.50.300 5 110 1.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00990 497aaeb7fb3887c714b6e40fe494fa7f 720 Gene3D G3DSA:3.40.50.300 191 285 1.2E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21540 d6a55348b5ccecf87103cde0278d1b85 395 PANTHER PTHR10578 7 382 2.5E-163 T 22-04-2016 APT61_RS21540 d6a55348b5ccecf87103cde0278d1b85 395 PANTHER PTHR10578:SF65 7 382 2.5E-163 T 22-04-2016 APT61_RS21540 d6a55348b5ccecf87103cde0278d1b85 395 PIRSF PIRSF000138 2 380 3.0E-121 T 22-04-2016 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 APT61_RS21540 d6a55348b5ccecf87103cde0278d1b85 395 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 22-04-2016 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 APT61_RS21540 d6a55348b5ccecf87103cde0278d1b85 395 Pfam PF01070 FMN-dependent dehydrogenase 13 376 4.1E-124 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 APT61_RS21540 d6a55348b5ccecf87103cde0278d1b85 395 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 73.373 T 22-04-2016 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 APT61_RS21540 d6a55348b5ccecf87103cde0278d1b85 395 Gene3D G3DSA:3.20.20.70 6 377 4.7E-133 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS21540 d6a55348b5ccecf87103cde0278d1b85 395 SUPERFAMILY SSF51395 223 375 9.77E-99 T 22-04-2016 APT61_RS21540 d6a55348b5ccecf87103cde0278d1b85 395 SUPERFAMILY SSF51395 6 193 9.77E-99 T 22-04-2016 APT61_RS04395 b962b5f112f91a3f26bbb63516aaf9bc 397 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 39.419 T 22-04-2016 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 APT61_RS04395 b962b5f112f91a3f26bbb63516aaf9bc 397 PANTHER PTHR23513:SF8 1 397 8.3E-200 T 22-04-2016 APT61_RS04395 b962b5f112f91a3f26bbb63516aaf9bc 397 SUPERFAMILY SSF103473 16 395 1.44E-24 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS04395 b962b5f112f91a3f26bbb63516aaf9bc 397 PANTHER PTHR23513 1 397 8.3E-200 T 22-04-2016 APT61_RS04395 b962b5f112f91a3f26bbb63516aaf9bc 397 Pfam PF07690 Major Facilitator Superfamily 21 354 4.3E-15 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS04395 b962b5f112f91a3f26bbb63516aaf9bc 397 Gene3D G3DSA:1.20.1250.20 16 189 5.5E-12 T 22-04-2016 APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 PANTHER PTHR11206:SF90 217 442 6.4E-98 T 22-04-2016 APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 PANTHER PTHR11206:SF90 70 82 6.4E-98 T 22-04-2016 APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 PANTHER PTHR11206:SF90 469 493 6.4E-98 T 22-04-2016 APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 PIRSF PIRSF002869 1 511 2.0E-181 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 508 1.1E-173 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 PANTHER PTHR11206 217 442 6.4E-98 T 22-04-2016 APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 PANTHER PTHR11206 70 82 6.4E-98 T 22-04-2016 APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 PANTHER PTHR11206 469 493 6.4E-98 T 22-04-2016 APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 Pfam PF03023 MviN-like protein 28 478 4.2E-157 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 PRINTS PR01806 Virulence factor MviN signature 133 157 2.3E-87 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 PRINTS PR01806 Virulence factor MviN signature 409 426 2.3E-87 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 PRINTS PR01806 Virulence factor MviN signature 157 178 2.3E-87 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 PRINTS PR01806 Virulence factor MviN signature 33 52 2.3E-87 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 PRINTS PR01806 Virulence factor MviN signature 259 285 2.3E-87 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 PRINTS PR01806 Virulence factor MviN signature 357 376 2.3E-87 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APT61_RS14110 c25d8ebe15ef2c8954d196ded4e566b4 511 PRINTS PR01806 Virulence factor MviN signature 52 68 2.3E-87 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 731 758 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 Gene3D G3DSA:2.40.40.20 670 814 2.2E-57 T 22-04-2016 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 Gene3D G3DSA:2.20.25.90 53 120 2.3E-18 T 22-04-2016 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 Gene3D G3DSA:3.40.50.740 411 654 2.9E-79 T 22-04-2016 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 Gene3D G3DSA:3.40.50.740 121 206 2.9E-79 T 22-04-2016 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 PANTHER PTHR11615:SF128 352 814 0.0 T 22-04-2016 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 PANTHER PTHR11615:SF128 5 320 0.0 T 22-04-2016 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 Gene3D G3DSA:3.40.228.10 207 410 7.9E-75 T 22-04-2016 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 56 116 4.6E-18 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 PANTHER PTHR11615 352 814 0.0 T 22-04-2016 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 PANTHER PTHR11615 5 320 0.0 T 22-04-2016 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 814 0.0 T 22-04-2016 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 SUPERFAMILY SSF53706 57 697 8.9E-178 T 22-04-2016 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 Pfam PF01568 Molydopterin dinucleotide binding domain 695 806 1.1E-26 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 61 79 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 517 534 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 SMART SM00926 56 116 9.3E-10 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 SUPERFAMILY SSF50692 641 814 2.08E-38 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS15025 138aba8de3e8a4d54cd331ca7a001224 814 Pfam PF00384 Molybdopterin oxidoreductase 119 576 1.8E-107 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS09680 4f9e7abde59c72cc2b455dbf17d74365 119 Pfam PF04024 PspC domain 8 65 7.9E-15 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal APT61_RS09680 4f9e7abde59c72cc2b455dbf17d74365 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 119 4.5E-39 T 22-04-2016 IPR014320 Phage shock protein, PspC APT61_RS09680 4f9e7abde59c72cc2b455dbf17d74365 119 PANTHER PTHR33885 1 119 6.3E-39 T 22-04-2016 APT61_RS09495 7d24503e6e4c0ad9a01af5e2e59831a4 452 Gene3D G3DSA:3.20.20.70 1 258 1.0E-101 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS09495 7d24503e6e4c0ad9a01af5e2e59831a4 452 SUPERFAMILY SSF51366 1 251 1.14E-83 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APT61_RS09495 7d24503e6e4c0ad9a01af5e2e59831a4 452 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 251 3.5E-95 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APT61_RS09495 7d24503e6e4c0ad9a01af5e2e59831a4 452 PANTHER PTHR22854 1 282 1.3E-140 T 22-04-2016 APT61_RS09495 7d24503e6e4c0ad9a01af5e2e59831a4 452 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 254 34.846 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APT61_RS09495 7d24503e6e4c0ad9a01af5e2e59831a4 452 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 257 447 4.6E-60 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 APT61_RS09495 7d24503e6e4c0ad9a01af5e2e59831a4 452 PANTHER PTHR22854:SF2 1 282 1.3E-140 T 22-04-2016 APT61_RS09495 7d24503e6e4c0ad9a01af5e2e59831a4 452 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 APT61_RS09495 7d24503e6e4c0ad9a01af5e2e59831a4 452 SUPERFAMILY SSF51366 257 450 5.02E-58 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APT61_RS09495 7d24503e6e4c0ad9a01af5e2e59831a4 452 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 255 452 30.3 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 APT61_RS09495 7d24503e6e4c0ad9a01af5e2e59831a4 452 Gene3D G3DSA:3.20.20.70 259 445 4.9E-62 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS05780 4693347694b854325710a80eae44fb6b 158 PANTHER PTHR35867 2 153 5.6E-37 T 22-04-2016 APT61_RS05780 4693347694b854325710a80eae44fb6b 158 PANTHER PTHR35867:SF1 2 153 5.6E-37 T 22-04-2016 APT61_RS05780 4693347694b854325710a80eae44fb6b 158 PIRSF PIRSF004923 1 151 1.7E-38 T 22-04-2016 IPR026268 Protein RseC APT61_RS05780 4693347694b854325710a80eae44fb6b 158 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 2.6E-31 T 22-04-2016 IPR007359 Positive regulator of sigma(E), RseC/MucC APT61_RS11780 b7180944580586515764e906371916ed 237 Pfam PF09347 Domain of unknown function (DUF1989) 9 181 1.4E-51 T 22-04-2016 IPR018959 Domain of unknown function DUF1989 APT61_RS11780 b7180944580586515764e906371916ed 237 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 7 235 1.4E-92 T 22-04-2016 IPR017792 Urea carboxylase-associated protein 2 APT61_RS11780 b7180944580586515764e906371916ed 237 PANTHER PTHR31527:SF0 7 186 1.5E-21 T 22-04-2016 APT61_RS11780 b7180944580586515764e906371916ed 237 PANTHER PTHR31527 7 186 1.5E-21 T 22-04-2016 APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 SUPERFAMILY SSF53182 1 214 4.19E-76 T 22-04-2016 APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 Pfam PF01470 Pyroglutamyl peptidase 3 202 5.5E-83 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 5.8E-49 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 5.8E-49 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 5.8E-49 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 5.8E-49 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 161 173 5.8E-49 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 PANTHER PTHR23402 1 213 2.0E-68 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 PANTHER PTHR23402:SF1 1 213 2.0E-68 T 22-04-2016 APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 PIRSF PIRSF015592 1 212 2.7E-87 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 212 5.1E-90 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 Gene3D G3DSA:3.40.630.20 2 211 1.1E-69 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like APT61_RS16140 2b71b8dbc08670d2557babc19089392c 214 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 200 41.214 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 SMART SM00912 86 206 3.1E-49 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Gene3D G3DSA:2.160.20.10 74 366 1.2E-98 T 22-04-2016 IPR012334 Pectin lyase fold APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 777 797 0.69 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 955 984 6.9E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 667 693 0.0083 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 736 773 9.6E-7 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1691 1728 6.3E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1072 1112 0.0041 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 675 705 2.0E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1240 1266 2.4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 589 629 0.0015 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 924 956 1.4E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 486 522 2.8E-6 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 695 735 3.1E-9 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1348 1385 3.4E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 547 588 1.5E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1158 1188 2.5 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 635 673 0.11 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1010 1043 4.3E-5 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 883 922 3.6E-6 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 443 479 0.0028 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 997 1028 0.0015 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 504 539 6.6E-5 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1031 1068 0.0032 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 801 838 0.0079 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 1112 1150 8.9E-4 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 PANTHER PTHR32093:SF41 1 550 3.2E-74 T 22-04-2016 APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 PANTHER PTHR32093:SF41 2710 2743 3.2E-74 T 22-04-2016 APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF04829 Pre-toxin domain with VENN motif 2657 2706 5.9E-18 T 22-04-2016 IPR006914 VENN motif-containing domain APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 SUPERFAMILY SSF51126 76 354 4.71E-68 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF05860 haemagglutination activity domain 72 205 9.3E-34 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 PANTHER PTHR32093 1 550 3.2E-74 T 22-04-2016 APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 PANTHER PTHR32093 2710 2743 3.2E-74 T 22-04-2016 APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 25 2.5E-10 T 22-04-2016 IPR024973 ESPR domain APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 105 200 6.4E-22 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF13332 Haemagluttinin repeat 1922 2003 3.2E-7 T 22-04-2016 IPR025157 Haemagluttinin repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF13332 Haemagluttinin repeat 2146 2314 4.6E-46 T 22-04-2016 IPR025157 Haemagluttinin repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF13332 Haemagluttinin repeat 1839 1909 2.8E-7 T 22-04-2016 IPR025157 Haemagluttinin repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF15530 Bacterial toxin 25 2724 2881 5.3E-51 T 22-04-2016 IPR029113 Bacterial toxin 25 APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF05594 Haemagluttinin repeat 2015 2078 25.0 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF05594 Haemagluttinin repeat 253 331 2.6E-5 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF05594 Haemagluttinin repeat 997 1043 0.12 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF05594 Haemagluttinin repeat 915 957 0.0013 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF05594 Haemagluttinin repeat 961 986 19.0 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF05594 Haemagluttinin repeat 641 705 0.0012 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF05594 Haemagluttinin repeat 748 810 0.0023 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF05594 Haemagluttinin repeat 490 545 0.037 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF05594 Haemagluttinin repeat 1219 1260 110.0 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF05594 Haemagluttinin repeat 1348 1377 19.0 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF05594 Haemagluttinin repeat 551 623 3.7 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS00315 c8d26632a6d951f93f28e54e2860da8c 2887 Pfam PF05594 Haemagluttinin repeat 1103 1164 0.11 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat APT61_RS09050 e374215442fac16416700bd49e5407f7 220 Gene3D G3DSA:3.40.810.20 6 212 1.5E-74 T 22-04-2016 APT61_RS09050 e374215442fac16416700bd49e5407f7 220 Pfam PF01144 Coenzyme A transferase 7 186 7.6E-36 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APT61_RS09050 e374215442fac16416700bd49e5407f7 220 PANTHER PTHR13707 10 199 1.8E-79 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APT61_RS09050 e374215442fac16416700bd49e5407f7 220 SMART SM00882 7 204 9.2E-61 T 22-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 APT61_RS09050 e374215442fac16416700bd49e5407f7 220 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 5 210 7.4E-89 T 22-04-2016 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 APT61_RS09050 e374215442fac16416700bd49e5407f7 220 SUPERFAMILY SSF100950 6 214 4.54E-61 T 22-04-2016 APT61_RS09050 e374215442fac16416700bd49e5407f7 220 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 45 53 - T 22-04-2016 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 APT61_RS08740 825824c5b0b4d540b26e654527df77bf 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 9.5E-11 T 22-04-2016 APT61_RS08740 825824c5b0b4d540b26e654527df77bf 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 9.5E-11 T 22-04-2016 APT61_RS08740 825824c5b0b4d540b26e654527df77bf 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 9.5E-11 T 22-04-2016 APT61_RS08740 825824c5b0b4d540b26e654527df77bf 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 9.5E-11 T 22-04-2016 APT61_RS08740 825824c5b0b4d540b26e654527df77bf 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 9.5E-11 T 22-04-2016 APT61_RS08740 825824c5b0b4d540b26e654527df77bf 457 PANTHER PTHR23501 6 456 2.6E-165 T 22-04-2016 APT61_RS08740 825824c5b0b4d540b26e654527df77bf 457 Pfam PF07690 Major Facilitator Superfamily 22 412 1.5E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS08740 825824c5b0b4d540b26e654527df77bf 457 SUPERFAMILY SSF103473 10 198 1.28E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS08740 825824c5b0b4d540b26e654527df77bf 457 SUPERFAMILY SSF103473 251 454 1.28E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS08740 825824c5b0b4d540b26e654527df77bf 457 Gene3D G3DSA:1.20.1250.20 16 194 5.3E-28 T 22-04-2016 APT61_RS08740 825824c5b0b4d540b26e654527df77bf 457 Gene3D G3DSA:1.20.1250.20 264 448 9.7E-20 T 22-04-2016 APT61_RS08740 825824c5b0b4d540b26e654527df77bf 457 PANTHER PTHR23501:SF5 6 456 2.6E-165 T 22-04-2016 APT61_RS08880 5e49fddfbebf5fa91aca2c28876bf3c6 230 SUPERFAMILY SSF63848 124 229 2.35E-31 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 APT61_RS08880 5e49fddfbebf5fa91aca2c28876bf3c6 230 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 229 2.5E-69 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 APT61_RS08880 5e49fddfbebf5fa91aca2c28876bf3c6 230 PANTHER PTHR34108 3 230 7.3E-74 T 22-04-2016 APT61_RS08880 5e49fddfbebf5fa91aca2c28876bf3c6 230 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 230 29.156 T 22-04-2016 IPR013033 Septum formation inhibitor MinC GO:0000917|GO:0051726 APT61_RS08880 5e49fddfbebf5fa91aca2c28876bf3c6 230 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 127 226 2.5E-30 T 22-04-2016 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 APT61_RS08880 5e49fddfbebf5fa91aca2c28876bf3c6 230 PANTHER PTHR34108:SF1 3 230 7.3E-74 T 22-04-2016 APT61_RS08880 5e49fddfbebf5fa91aca2c28876bf3c6 230 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 8.7E-35 T 22-04-2016 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 APT61_RS08880 5e49fddfbebf5fa91aca2c28876bf3c6 230 Gene3D G3DSA:2.160.20.70 115 229 4.0E-37 T 22-04-2016 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 APT61_RS16515 c706b69d9b0b7033a463e4cf66866148 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 7.2E-7 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS16515 c706b69d9b0b7033a463e4cf66866148 187 PANTHER PTHR10681 1 187 8.5E-94 T 22-04-2016 APT61_RS16515 c706b69d9b0b7033a463e4cf66866148 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 2.1E-103 T 22-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS16515 c706b69d9b0b7033a463e4cf66866148 187 PANTHER PTHR10681:SF121 1 187 8.5E-94 T 22-04-2016 APT61_RS16515 c706b69d9b0b7033a463e4cf66866148 187 Gene3D G3DSA:3.40.30.10 4 183 2.4E-59 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS16515 c706b69d9b0b7033a463e4cf66866148 187 PIRSF PIRSF000239 1 187 1.9E-50 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APT61_RS16515 c706b69d9b0b7033a463e4cf66866148 187 Pfam PF00578 AhpC/TSA family 10 133 3.6E-32 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS16515 c706b69d9b0b7033a463e4cf66866148 187 SUPERFAMILY SSF52833 1 186 5.87E-53 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS20255 b7cd1ab08e42262c02e0525ac695ebeb 101 PANTHER PTHR33843:SF1 1 101 8.5E-48 T 22-04-2016 APT61_RS20255 b7cd1ab08e42262c02e0525ac695ebeb 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 79 5.6E-14 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS20255 b7cd1ab08e42262c02e0525ac695ebeb 101 PANTHER PTHR33843 1 101 8.5E-48 T 22-04-2016 APT61_RS20255 b7cd1ab08e42262c02e0525ac695ebeb 101 Gene3D G3DSA:3.40.50.270 4 93 1.5E-17 T 22-04-2016 APT61_RS20255 b7cd1ab08e42262c02e0525ac695ebeb 101 SUPERFAMILY SSF52794 3 95 1.31E-17 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS11895 8cf9c32f62d48ceef87e28d8abc8d7f6 444 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 31 438 5.6E-192 T 22-04-2016 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- APT61_RS11895 8cf9c32f62d48ceef87e28d8abc8d7f6 444 PANTHER PTHR10859:SF92 60 425 2.2E-150 T 22-04-2016 APT61_RS11895 8cf9c32f62d48ceef87e28d8abc8d7f6 444 Gene3D G3DSA:3.90.550.10 75 321 3.8E-47 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS11895 8cf9c32f62d48ceef87e28d8abc8d7f6 444 PANTHER PTHR10859 60 425 2.2E-150 T 22-04-2016 APT61_RS11895 8cf9c32f62d48ceef87e28d8abc8d7f6 444 SUPERFAMILY SSF53448 64 343 2.4E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS11895 8cf9c32f62d48ceef87e28d8abc8d7f6 444 Pfam PF13641 Glycosyltransferase like family 2 77 297 1.2E-38 T 22-04-2016 APT61_RS09570 44b852286a44ea264a464981dd692af4 196 PANTHER PTHR21327:SF14 1 196 5.1E-144 T 22-04-2016 APT61_RS09570 44b852286a44ea264a464981dd692af4 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 48.74 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APT61_RS09570 44b852286a44ea264a464981dd692af4 196 Pfam PF00925 GTP cyclohydrolase II 4 170 5.8E-69 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APT61_RS09570 44b852286a44ea264a464981dd692af4 196 PANTHER PTHR21327 1 196 5.1E-144 T 22-04-2016 APT61_RS09570 44b852286a44ea264a464981dd692af4 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 1.3E-92 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APT61_RS09570 44b852286a44ea264a464981dd692af4 196 SUPERFAMILY SSF142695 3 173 2.88E-67 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 APT61_RS22030 6713e3e05ac517c4640512f7e3d6fa2d 422 Pfam PF12566 Protein of unknown function (DUF3748) 77 193 5.5E-53 T 22-04-2016 IPR022223 Protein of unknown function DUF3748 APT61_RS22030 6713e3e05ac517c4640512f7e3d6fa2d 422 Gene3D G3DSA:2.120.10.30 242 411 2.5E-25 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APT61_RS22030 6713e3e05ac517c4640512f7e3d6fa2d 422 Gene3D G3DSA:2.120.10.30 24 159 2.5E-25 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APT61_RS22030 6713e3e05ac517c4640512f7e3d6fa2d 422 SUPERFAMILY SSF82171 288 417 3.65E-17 T 22-04-2016 APT61_RS22030 6713e3e05ac517c4640512f7e3d6fa2d 422 SUPERFAMILY SSF82171 33 252 3.65E-17 T 22-04-2016 APT61_RS07615 4e3ea18f348ffa93713ac7f3b47845cc 410 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 1 408 52.858 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA APT61_RS07615 4e3ea18f348ffa93713ac7f3b47845cc 410 PANTHER PTHR30469 1 398 3.4E-200 T 22-04-2016 APT61_RS07615 4e3ea18f348ffa93713ac7f3b47845cc 410 Pfam PF13437 HlyD family secretion protein 195 298 4.0E-7 T 22-04-2016 APT61_RS07615 4e3ea18f348ffa93713ac7f3b47845cc 410 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 59 387 3.8E-77 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APT61_RS07615 4e3ea18f348ffa93713ac7f3b47845cc 410 Pfam PF13533 Biotin-lipoyl like 84 132 5.1E-15 T 22-04-2016 APT61_RS07615 4e3ea18f348ffa93713ac7f3b47845cc 410 PANTHER PTHR30469:SF12 1 398 3.4E-200 T 22-04-2016 IPR022824 Multidrug resistance protein MdtA APT61_RS07615 4e3ea18f348ffa93713ac7f3b47845cc 410 SUPERFAMILY SSF111369 76 310 3.4E-54 T 22-04-2016 APT61_RS07615 4e3ea18f348ffa93713ac7f3b47845cc 410 Gene3D G3DSA:2.40.50.100 192 225 1.9E-23 T 22-04-2016 APT61_RS07615 4e3ea18f348ffa93713ac7f3b47845cc 410 Gene3D G3DSA:2.40.50.100 83 117 1.9E-23 T 22-04-2016 APT61_RS10865 00a7321ba7b712fc47e7530c101d7861 206 SUPERFAMILY SSF47616 79 202 1.09E-16 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS10865 00a7321ba7b712fc47e7530c101d7861 206 PANTHER PTHR11260:SF178 2 205 4.0E-47 T 22-04-2016 APT61_RS10865 00a7321ba7b712fc47e7530c101d7861 206 SUPERFAMILY SSF52833 2 79 7.04E-11 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS10865 00a7321ba7b712fc47e7530c101d7861 206 Pfam PF13417 Glutathione S-transferase, N-terminal domain 17 77 2.1E-6 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APT61_RS10865 00a7321ba7b712fc47e7530c101d7861 206 PANTHER PTHR11260 2 205 4.0E-47 T 22-04-2016 APT61_RS10865 00a7321ba7b712fc47e7530c101d7861 206 Gene3D G3DSA:1.20.1050.10 88 190 5.0E-18 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS10865 00a7321ba7b712fc47e7530c101d7861 206 Gene3D G3DSA:3.40.30.10 2 87 2.2E-13 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS02370 52079b0efc73ed536f164b18f0d53869 449 SUPERFAMILY SSF56059 83 347 1.67E-69 T 22-04-2016 APT61_RS02370 52079b0efc73ed536f164b18f0d53869 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 7.8E-44 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain APT61_RS02370 52079b0efc73ed536f164b18f0d53869 449 SUPERFAMILY SSF51246 331 444 2.09E-43 T 22-04-2016 IPR011054 Rudiment single hybrid motif APT61_RS02370 52079b0efc73ed536f164b18f0d53869 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APT61_RS02370 52079b0efc73ed536f164b18f0d53869 449 Gene3D G3DSA:3.30.470.20 204 444 1.6E-99 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS02370 52079b0efc73ed536f164b18f0d53869 449 SUPERFAMILY SSF52440 1 113 1.22E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS02370 52079b0efc73ed536f164b18f0d53869 449 SMART SM00878 336 441 4.1E-64 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal APT61_RS02370 52079b0efc73ed536f164b18f0d53869 449 Gene3D G3DSA:3.30.1490.20 130 203 1.0E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APT61_RS02370 52079b0efc73ed536f164b18f0d53869 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APT61_RS02370 52079b0efc73ed536f164b18f0d53869 449 PANTHER PTHR18866 1 442 0.0 T 22-04-2016 APT61_RS02370 52079b0efc73ed536f164b18f0d53869 449 Gene3D G3DSA:3.40.50.20 1 129 1.5E-50 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS02370 52079b0efc73ed536f164b18f0d53869 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 1.6E-85 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 APT61_RS02370 52079b0efc73ed536f164b18f0d53869 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 1.8E-249 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 APT61_RS02370 52079b0efc73ed536f164b18f0d53869 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 8.7E-38 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal APT61_RS14805 77efcc9affc1a7d6144c9e8502172026 635 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS14805 77efcc9affc1a7d6144c9e8502172026 635 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS14805 77efcc9affc1a7d6144c9e8502172026 635 Pfam PF12848 ABC transporter 224 296 1.9E-11 T 22-04-2016 IPR032781 ABC-transporter extension domain APT61_RS14805 77efcc9affc1a7d6144c9e8502172026 635 SMART SM00382 344 515 2.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS14805 77efcc9affc1a7d6144c9e8502172026 635 SMART SM00382 28 230 7.2E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS14805 77efcc9affc1a7d6144c9e8502172026 635 Pfam PF16326 ABC transporter C-terminal domain 561 630 1.0E-20 T 22-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 APT61_RS14805 77efcc9affc1a7d6144c9e8502172026 635 Gene3D G3DSA:3.40.50.300 2 270 2.5E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14805 77efcc9affc1a7d6144c9e8502172026 635 Gene3D G3DSA:3.40.50.300 318 544 2.0E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14805 77efcc9affc1a7d6144c9e8502172026 635 PANTHER PTHR19211:SF45 1 571 1.2E-241 T 22-04-2016 APT61_RS14805 77efcc9affc1a7d6144c9e8502172026 635 PANTHER PTHR19211 1 571 1.2E-241 T 22-04-2016 APT61_RS14805 77efcc9affc1a7d6144c9e8502172026 635 SUPERFAMILY SSF52540 9 236 3.33E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14805 77efcc9affc1a7d6144c9e8502172026 635 Pfam PF00005 ABC transporter 336 469 1.5E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS14805 77efcc9affc1a7d6144c9e8502172026 635 Pfam PF00005 ABC transporter 19 185 3.7E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS14805 77efcc9affc1a7d6144c9e8502172026 635 SUPERFAMILY SSF52540 312 501 2.92E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05075 062644d7a83f7d33bff3983aace93f65 139 Pfam PF00384 Molybdopterin oxidoreductase 61 138 1.1E-17 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS05075 062644d7a83f7d33bff3983aace93f65 139 Gene3D G3DSA:3.40.50.740 61 136 2.0E-26 T 22-04-2016 APT61_RS05075 062644d7a83f7d33bff3983aace93f65 139 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 6.3E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS05075 062644d7a83f7d33bff3983aace93f65 139 Gene3D G3DSA:2.20.25.90 1 54 7.4E-21 T 22-04-2016 APT61_RS05075 062644d7a83f7d33bff3983aace93f65 139 SUPERFAMILY SSF53706 1 139 3.14E-49 T 22-04-2016 APT61_RS05075 062644d7a83f7d33bff3983aace93f65 139 PANTHER PTHR11615:SF112 1 139 1.9E-49 T 22-04-2016 APT61_RS05075 062644d7a83f7d33bff3983aace93f65 139 SMART SM00926 1 54 2.7E-15 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS05075 062644d7a83f7d33bff3983aace93f65 139 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APT61_RS05075 062644d7a83f7d33bff3983aace93f65 139 PANTHER PTHR11615 1 139 1.9E-49 T 22-04-2016 APT61_RS19710 d6c08ac32edbd9ffffb4655a3fc91fb3 273 PANTHER PTHR10992 3 272 7.4E-103 T 22-04-2016 APT61_RS19710 d6c08ac32edbd9ffffb4655a3fc91fb3 273 PRINTS PR00412 Epoxide hydrolase signature 247 269 1.1E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS19710 d6c08ac32edbd9ffffb4655a3fc91fb3 273 PRINTS PR00412 Epoxide hydrolase signature 106 119 1.1E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS19710 d6c08ac32edbd9ffffb4655a3fc91fb3 273 PRINTS PR00412 Epoxide hydrolase signature 213 229 1.1E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS19710 d6c08ac32edbd9ffffb4655a3fc91fb3 273 PRINTS PR00412 Epoxide hydrolase signature 27 45 1.1E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS19710 d6c08ac32edbd9ffffb4655a3fc91fb3 273 PRINTS PR00412 Epoxide hydrolase signature 47 62 1.1E-8 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS19710 d6c08ac32edbd9ffffb4655a3fc91fb3 273 Gene3D G3DSA:3.40.50.1820 4 271 7.1E-69 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS19710 d6c08ac32edbd9ffffb4655a3fc91fb3 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 1.7E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS19710 d6c08ac32edbd9ffffb4655a3fc91fb3 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 91 104 1.7E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS19710 d6c08ac32edbd9ffffb4655a3fc91fb3 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 215 229 1.7E-12 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS19710 d6c08ac32edbd9ffffb4655a3fc91fb3 273 Pfam PF00561 alpha/beta hydrolase fold 21 256 2.1E-26 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS19710 d6c08ac32edbd9ffffb4655a3fc91fb3 273 PANTHER PTHR10992:SF859 3 272 7.4E-103 T 22-04-2016 APT61_RS19710 d6c08ac32edbd9ffffb4655a3fc91fb3 273 SUPERFAMILY SSF53474 3 271 1.08E-64 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS08760 139b1bdceb366831dd5bc653daec7bf4 96 Pfam PF13974 YebO-like protein 17 96 1.5E-30 T 22-04-2016 IPR025594 YebO-like protein APT61_RS14955 aaf4f6300e65176c75b006e21f0a3978 95 PANTHER PTHR33175 1 93 2.8E-50 T 22-04-2016 APT61_RS14955 aaf4f6300e65176c75b006e21f0a3978 95 SMART SM00411 1 91 4.1E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS14955 aaf4f6300e65176c75b006e21f0a3978 95 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APT61_RS14955 aaf4f6300e65176c75b006e21f0a3978 95 Pfam PF00216 Bacterial DNA-binding protein 1 91 5.0E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS14955 aaf4f6300e65176c75b006e21f0a3978 95 Gene3D G3DSA:4.10.520.10 1 91 2.7E-34 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APT61_RS14955 aaf4f6300e65176c75b006e21f0a3978 95 PANTHER PTHR33175:SF5 1 93 2.8E-50 T 22-04-2016 APT61_RS14955 aaf4f6300e65176c75b006e21f0a3978 95 SUPERFAMILY SSF47729 1 91 1.03E-29 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APT61_RS14955 aaf4f6300e65176c75b006e21f0a3978 95 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.429 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 APT61_RS14955 aaf4f6300e65176c75b006e21f0a3978 95 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 7.9E-53 T 22-04-2016 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 APT61_RS14955 aaf4f6300e65176c75b006e21f0a3978 95 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 3.3E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS14955 aaf4f6300e65176c75b006e21f0a3978 95 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 3.3E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS14955 aaf4f6300e65176c75b006e21f0a3978 95 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 3.3E-19 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS06620 8decd20e58f862179f7f2d828890bbbd 183 Pfam PF01713 Smr domain 98 172 5.0E-18 T 22-04-2016 IPR002625 Smr domain APT61_RS06620 8decd20e58f862179f7f2d828890bbbd 183 PANTHER PTHR35562:SF1 1 183 3.3E-123 T 22-04-2016 APT61_RS06620 8decd20e58f862179f7f2d828890bbbd 183 PANTHER PTHR35562 1 183 3.3E-123 T 22-04-2016 APT61_RS06620 8decd20e58f862179f7f2d828890bbbd 183 SMART SM00463 95 173 1.5E-22 T 22-04-2016 IPR002625 Smr domain APT61_RS06620 8decd20e58f862179f7f2d828890bbbd 183 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 42.429 T 22-04-2016 IPR022990 Uncharacterised protein family UPF0115 APT61_RS06620 8decd20e58f862179f7f2d828890bbbd 183 SUPERFAMILY SSF160443 96 170 8.37E-10 T 22-04-2016 IPR002625 Smr domain APT61_RS13790 f309c3160d99b77fb7b4a5dadd2ce07c 157 PANTHER PTHR22769 1 127 1.1E-29 T 22-04-2016 APT61_RS13790 f309c3160d99b77fb7b4a5dadd2ce07c 157 Gene3D G3DSA:3.90.79.10 2 142 1.9E-30 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS13790 f309c3160d99b77fb7b4a5dadd2ce07c 157 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APT61_RS13790 f309c3160d99b77fb7b4a5dadd2ce07c 157 SUPERFAMILY SSF55811 2 132 6.36E-29 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS13790 f309c3160d99b77fb7b4a5dadd2ce07c 157 Pfam PF00293 NUDIX domain 3 114 2.6E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APT61_RS13790 f309c3160d99b77fb7b4a5dadd2ce07c 157 PRINTS PR00502 NUDIX hydrolase family signature 45 60 1.8E-5 T 22-04-2016 IPR020476 NUDIX hydrolase APT61_RS13790 f309c3160d99b77fb7b4a5dadd2ce07c 157 PRINTS PR00502 NUDIX hydrolase family signature 31 45 1.8E-5 T 22-04-2016 IPR020476 NUDIX hydrolase APT61_RS13790 f309c3160d99b77fb7b4a5dadd2ce07c 157 PANTHER PTHR22769:SF14 1 127 1.1E-29 T 22-04-2016 APT61_RS00815 d6db812fa1d4ccca45bb842b0f79294d 93 Gene3D G3DSA:3.10.50.40 5 91 9.5E-34 T 22-04-2016 APT61_RS00815 d6db812fa1d4ccca45bb842b0f79294d 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APT61_RS00815 d6db812fa1d4ccca45bb842b0f79294d 93 PANTHER PTHR10657 9 92 3.9E-35 T 22-04-2016 APT61_RS00815 d6db812fa1d4ccca45bb842b0f79294d 93 Pfam PF13616 PPIC-type PPIASE domain 14 90 3.8E-21 T 22-04-2016 APT61_RS00815 d6db812fa1d4ccca45bb842b0f79294d 93 SUPERFAMILY SSF54534 5 90 1.5E-27 T 22-04-2016 APT61_RS20810 8b7b2cff8c642cdb0a83af066a429b84 229 PANTHER PTHR30249 1 229 1.3E-138 T 22-04-2016 APT61_RS20810 8b7b2cff8c642cdb0a83af066a429b84 229 Pfam PF04172 LrgB-like family 14 225 1.2E-67 T 22-04-2016 IPR007300 CidB/LrgB family APT61_RS20810 8b7b2cff8c642cdb0a83af066a429b84 229 PANTHER PTHR30249:SF4 1 229 1.3E-138 T 22-04-2016 APT61_RS03985 02c2ca7cb480ffb827e6b7b09600cf5d 229 SMART SM00346 6 95 0.0044 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APT61_RS03985 02c2ca7cb480ffb827e6b7b09600cf5d 229 PANTHER PTHR30136 2 229 1.1E-35 T 22-04-2016 APT61_RS03985 02c2ca7cb480ffb827e6b7b09600cf5d 229 SUPERFAMILY SSF46785 7 76 2.64E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03985 02c2ca7cb480ffb827e6b7b09600cf5d 229 PANTHER PTHR30136:SF3 2 229 1.1E-35 T 22-04-2016 APT61_RS03985 02c2ca7cb480ffb827e6b7b09600cf5d 229 Gene3D G3DSA:3.30.450.40 78 196 1.7E-5 T 22-04-2016 IPR029016 GAF domain-like APT61_RS03985 02c2ca7cb480ffb827e6b7b09600cf5d 229 SUPERFAMILY SSF55781 77 219 2.29E-7 T 22-04-2016 IPR029016 GAF domain-like APT61_RS03985 02c2ca7cb480ffb827e6b7b09600cf5d 229 Gene3D G3DSA:1.10.10.10 3 73 6.8E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00640 8b256bb3c94313873dc14097523c96c5 106 PANTHER PTHR30505 1 102 2.8E-41 T 22-04-2016 APT61_RS00640 8b256bb3c94313873dc14097523c96c5 106 SUPERFAMILY SSF52794 3 100 4.53E-35 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS00640 8b256bb3c94313873dc14097523c96c5 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 96 3.0E-21 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS00640 8b256bb3c94313873dc14097523c96c5 106 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 89 1.7E-40 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 APT61_RS00640 8b256bb3c94313873dc14097523c96c5 106 Gene3D G3DSA:3.40.50.2300 2 100 2.6E-41 T 22-04-2016 APT61_RS06630 f69f1a0356c30212d6c3268c84441b70 361 PIRSF PIRSF001456 3 358 3.1E-140 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS06630 f69f1a0356c30212d6c3268c84441b70 361 Gene3D G3DSA:3.60.150.10 9 352 7.4E-159 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS06630 f69f1a0356c30212d6c3268c84441b70 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS06630 f69f1a0356c30212d6c3268c84441b70 361 PANTHER PTHR21085 2 351 1.8E-219 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS06630 f69f1a0356c30212d6c3268c84441b70 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.282 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS06630 f69f1a0356c30212d6c3268c84441b70 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS06630 f69f1a0356c30212d6c3268c84441b70 361 Pfam PF01264 Chorismate synthase 10 345 1.1E-141 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS06630 f69f1a0356c30212d6c3268c84441b70 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 1.3E-137 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS06630 f69f1a0356c30212d6c3268c84441b70 361 SUPERFAMILY SSF103263 4 352 1.96E-147 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS06630 f69f1a0356c30212d6c3268c84441b70 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS18675 dd17ad9634b111a7e4fb48d9e95ec3d0 314 SUPERFAMILY SSF53850 105 311 4.89E-35 T 22-04-2016 APT61_RS18675 dd17ad9634b111a7e4fb48d9e95ec3d0 314 Gene3D G3DSA:1.10.10.10 17 100 1.3E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18675 dd17ad9634b111a7e4fb48d9e95ec3d0 314 Gene3D G3DSA:3.40.190.10 188 282 5.0E-15 T 22-04-2016 APT61_RS18675 dd17ad9634b111a7e4fb48d9e95ec3d0 314 Pfam PF03466 LysR substrate binding domain 134 312 6.3E-15 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS18675 dd17ad9634b111a7e4fb48d9e95ec3d0 314 SUPERFAMILY SSF46785 20 98 3.81E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18675 dd17ad9634b111a7e4fb48d9e95ec3d0 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 60 71 6.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS18675 dd17ad9634b111a7e4fb48d9e95ec3d0 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS18675 dd17ad9634b111a7e4fb48d9e95ec3d0 314 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 60 6.3E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS18675 dd17ad9634b111a7e4fb48d9e95ec3d0 314 PANTHER PTHR30118:SF6 13 314 1.0E-159 T 22-04-2016 APT61_RS18675 dd17ad9634b111a7e4fb48d9e95ec3d0 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 24 81 3.0E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS18675 dd17ad9634b111a7e4fb48d9e95ec3d0 314 Gene3D G3DSA:3.40.190.10 287 314 3.4E-20 T 22-04-2016 APT61_RS18675 dd17ad9634b111a7e4fb48d9e95ec3d0 314 Gene3D G3DSA:3.40.190.10 105 187 3.4E-20 T 22-04-2016 APT61_RS18675 dd17ad9634b111a7e4fb48d9e95ec3d0 314 PANTHER PTHR30118 13 314 1.0E-159 T 22-04-2016 APT61_RS17810 387796fd7787bba73654d53baad80e95 297 Gene3D G3DSA:3.20.20.70 3 289 1.7E-87 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS17810 387796fd7787bba73654d53baad80e95 297 PIRSF PIRSF001365 1 297 6.3E-83 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS17810 387796fd7787bba73654d53baad80e95 297 SMART SM01130 2 290 5.8E-90 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS17810 387796fd7787bba73654d53baad80e95 297 SUPERFAMILY SSF51569 2 288 1.88E-82 T 22-04-2016 APT61_RS17810 387796fd7787bba73654d53baad80e95 297 Pfam PF00701 Dihydrodipicolinate synthetase family 3 287 7.6E-59 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS17810 387796fd7787bba73654d53baad80e95 297 PANTHER PTHR12128 1 286 8.7E-86 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS17810 387796fd7787bba73654d53baad80e95 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 3.0E-15 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS17810 387796fd7787bba73654d53baad80e95 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 3.0E-15 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS17810 387796fd7787bba73654d53baad80e95 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 3.0E-15 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS17810 387796fd7787bba73654d53baad80e95 297 PANTHER PTHR12128:SF34 1 286 8.7E-86 T 22-04-2016 APT61_RS15895 f307f73864212fd94ca7d7b1fd8a0459 427 Gene3D G3DSA:2.160.20.10 77 421 2.4E-66 T 22-04-2016 IPR012334 Pectin lyase fold APT61_RS15895 f307f73864212fd94ca7d7b1fd8a0459 427 PANTHER PTHR31321:SF1 191 345 5.3E-62 T 22-04-2016 APT61_RS15895 f307f73864212fd94ca7d7b1fd8a0459 427 ProSitePatterns PS00503 Pectinesterase signature 2. 280 289 - T 22-04-2016 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 APT61_RS15895 f307f73864212fd94ca7d7b1fd8a0459 427 PANTHER PTHR31321 76 170 5.3E-62 T 22-04-2016 APT61_RS15895 f307f73864212fd94ca7d7b1fd8a0459 427 PANTHER PTHR31321:SF1 76 170 5.3E-62 T 22-04-2016 APT61_RS15895 f307f73864212fd94ca7d7b1fd8a0459 427 PANTHER PTHR31321 191 345 5.3E-62 T 22-04-2016 APT61_RS15895 f307f73864212fd94ca7d7b1fd8a0459 427 Pfam PF01095 Pectinesterase 194 338 4.8E-11 T 22-04-2016 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|KEGG: 00500+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248|UniPathway: UPA00545 APT61_RS15895 f307f73864212fd94ca7d7b1fd8a0459 427 SUPERFAMILY SSF51126 192 419 1.66E-37 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APT61_RS15895 f307f73864212fd94ca7d7b1fd8a0459 427 SUPERFAMILY SSF51126 77 155 1.66E-37 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APT61_RS06180 d8af6285c1fc2d01f70bbe5e1595646d 156 Gene3D G3DSA:3.40.30.10 2 154 2.5E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS06180 d8af6285c1fc2d01f70bbe5e1595646d 156 Pfam PF00578 AhpC/TSA family 7 134 1.8E-38 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS06180 d8af6285c1fc2d01f70bbe5e1595646d 156 SUPERFAMILY SSF52833 3 154 4.02E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS06180 d8af6285c1fc2d01f70bbe5e1595646d 156 PANTHER PTHR10681 1 153 5.2E-50 T 22-04-2016 APT61_RS06180 d8af6285c1fc2d01f70bbe5e1595646d 156 PIRSF PIRSF000239 1 153 4.6E-17 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APT61_RS00500 a7d50b4a19710e6ddc64cb30768c926a 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.533 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APT61_RS00500 a7d50b4a19710e6ddc64cb30768c926a 255 Pfam PF00121 Triosephosphate isomerase 5 246 2.8E-93 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APT61_RS00500 a7d50b4a19710e6ddc64cb30768c926a 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APT61_RS00500 a7d50b4a19710e6ddc64cb30768c926a 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 1.1E-105 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APT61_RS00500 a7d50b4a19710e6ddc64cb30768c926a 255 SUPERFAMILY SSF51351 1 248 1.83E-91 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APT61_RS00500 a7d50b4a19710e6ddc64cb30768c926a 255 PANTHER PTHR21139 1 255 2.0E-132 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 APT61_RS00500 a7d50b4a19710e6ddc64cb30768c926a 255 Gene3D G3DSA:3.20.20.70 1 250 3.6E-102 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS17675 62b5614e79fb7e66ca5804473f653c03 513 Pfam PF07730 Histidine kinase 316 380 1.5E-14 T 22-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 APT61_RS17675 62b5614e79fb7e66ca5804473f653c03 513 SMART SM00387 419 508 2.1E-10 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS17675 62b5614e79fb7e66ca5804473f653c03 513 Pfam PF05231 MASE1 10 281 2.4E-42 T 22-04-2016 IPR007895 MASE1 APT61_RS17675 62b5614e79fb7e66ca5804473f653c03 513 PANTHER PTHR24421:SF1 188 506 4.9E-54 T 22-04-2016 APT61_RS17675 62b5614e79fb7e66ca5804473f653c03 513 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 424 505 1.4E-8 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS17675 62b5614e79fb7e66ca5804473f653c03 513 Gene3D G3DSA:3.30.565.10 389 506 7.4E-12 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS17675 62b5614e79fb7e66ca5804473f653c03 513 PANTHER PTHR24421 188 506 4.9E-54 T 22-04-2016 APT61_RS17675 62b5614e79fb7e66ca5804473f653c03 513 SUPERFAMILY SSF55874 386 505 1.14E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS08915 5155ef867079014fe820e768d968a778 510 PANTHER PTHR30029 9 504 1.1E-246 T 22-04-2016 APT61_RS08915 5155ef867079014fe820e768d968a778 510 Pfam PF04293 SpoVR like protein 19 450 2.3E-177 T 22-04-2016 IPR007390 Sporulation stage V, protein R APT61_RS08915 5155ef867079014fe820e768d968a778 510 PANTHER PTHR30029:SF2 9 504 1.1E-246 T 22-04-2016 APT61_RS02000 ddceca556308d568f4135afd58c8eed8 240 PANTHER PTHR35568 10 237 2.1E-181 T 22-04-2016 APT61_RS02000 ddceca556308d568f4135afd58c8eed8 240 Pfam PF13309 HTH domain 171 228 2.9E-19 T 22-04-2016 APT61_RS02000 ddceca556308d568f4135afd58c8eed8 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 153 1.0E-68 T 22-04-2016 IPR013559 YheO-like APT61_RS02000 ddceca556308d568f4135afd58c8eed8 240 Pfam PF08348 YheO-like PAS domain 29 137 1.6E-35 T 22-04-2016 IPR013559 YheO-like APT61_RS02000 ddceca556308d568f4135afd58c8eed8 240 PANTHER PTHR35568:SF3 10 237 2.1E-181 T 22-04-2016 APT61_RS20555 7faba47d0fc3db295a39d2effc7d93ba 304 SUPERFAMILY SSF75005 32 215 2.44E-11 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APT61_RS15350 5211b6686997d59039706b2d24228a1f 129 ProDom PD079046 MEMBRANE INNER YBJM TRANSMEMBRANE 1 113 5.0E-23 T 22-04-2016 IPR020368 Uncharacterised protein family YbjM GO:0016021 APT61_RS15350 5211b6686997d59039706b2d24228a1f 129 Pfam PF11045 Putative inner membrane protein of Enterobacteriaceae 4 115 7.9E-35 T 22-04-2016 IPR020368 Uncharacterised protein family YbjM GO:0016021 APT61_RS18635 1417418b126dfb107aee2c0f3db9a0b9 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 491 4.5E-164 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 APT61_RS18635 1417418b126dfb107aee2c0f3db9a0b9 495 PANTHER PTHR23135 9 491 2.1E-223 T 22-04-2016 APT61_RS18635 1417418b126dfb107aee2c0f3db9a0b9 495 Pfam PF08245 Mur ligase middle domain 114 318 5.2E-52 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18635 1417418b126dfb107aee2c0f3db9a0b9 495 Gene3D G3DSA:3.40.1390.10 4 103 3.3E-32 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18635 1417418b126dfb107aee2c0f3db9a0b9 495 Pfam PF01225 Mur ligase family, catalytic domain 25 102 1.2E-11 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18635 1417418b126dfb107aee2c0f3db9a0b9 495 SUPERFAMILY SSF63418 5 103 1.14E-22 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18635 1417418b126dfb107aee2c0f3db9a0b9 495 SUPERFAMILY SSF53623 105 338 2.52E-78 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18635 1417418b126dfb107aee2c0f3db9a0b9 495 Gene3D G3DSA:3.40.1190.10 105 342 7.8E-82 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18635 1417418b126dfb107aee2c0f3db9a0b9 495 Gene3D G3DSA:3.90.190.20 343 484 1.0E-56 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS18635 1417418b126dfb107aee2c0f3db9a0b9 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 425 1.5E-24 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS18635 1417418b126dfb107aee2c0f3db9a0b9 495 SUPERFAMILY SSF53244 339 491 1.37E-49 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS18635 1417418b126dfb107aee2c0f3db9a0b9 495 PANTHER PTHR23135:SF4 9 491 2.1E-223 T 22-04-2016 APT61_RS18635 1417418b126dfb107aee2c0f3db9a0b9 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 34.412 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 Pfam PF13185 GAF domain 201 345 1.9E-10 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 SMART SM00065 26 174 3.7E-6 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 SMART SM00065 202 354 3.0E-18 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 Pfam PF02954 Bacterial regulatory protein, Fis family 647 687 3.3E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 405 418 - T 22-04-2016 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 Gene3D G3DSA:1.10.10.60 607 690 6.2E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 SUPERFAMILY SSF52540 380 618 5.93E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 603 620 7.1E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 670 690 7.1E-5 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 Gene3D G3DSA:1.10.8.60 554 606 3.6E-23 T 22-04-2016 APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 Gene3D G3DSA:3.40.50.300 377 553 1.3E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 SUPERFAMILY SSF55781 185 359 1.24E-19 T 22-04-2016 IPR029016 GAF domain-like APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 SUPERFAMILY SSF46689 594 690 3.49E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 PANTHER PTHR32071:SF16 331 694 1.5E-154 T 22-04-2016 APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 PANTHER PTHR32071 331 694 1.5E-154 T 22-04-2016 APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 SMART SM00382 401 545 1.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 Pfam PF00158 Sigma-54 interaction domain 381 547 3.7E-70 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 SUPERFAMILY SSF55781 12 173 1.66E-11 T 22-04-2016 IPR029016 GAF domain-like APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 594 603 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 Gene3D G3DSA:3.30.450.40 192 352 7.8E-22 T 22-04-2016 IPR029016 GAF domain-like APT61_RS04955 8e47b995274e17ad0127f624633cc70e 695 Gene3D G3DSA:3.30.450.40 16 166 1.1E-10 T 22-04-2016 IPR029016 GAF domain-like APT61_RS11815 e6dea47729c7b71f36a735f938825095 524 Pfam PF07690 Major Facilitator Superfamily 24 420 3.3E-22 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS11815 e6dea47729c7b71f36a735f938825095 524 Gene3D G3DSA:1.20.1250.20 491 515 1.6E-6 T 22-04-2016 APT61_RS11815 e6dea47729c7b71f36a735f938825095 524 Gene3D G3DSA:1.20.1250.20 296 431 1.6E-6 T 22-04-2016 APT61_RS11815 e6dea47729c7b71f36a735f938825095 524 SUPERFAMILY SSF103473 257 430 2.75E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11815 e6dea47729c7b71f36a735f938825095 524 SUPERFAMILY SSF103473 6 202 2.75E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11815 e6dea47729c7b71f36a735f938825095 524 SUPERFAMILY SSF103473 490 517 2.75E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11815 e6dea47729c7b71f36a735f938825095 524 PANTHER PTHR23501 12 466 5.8E-84 T 22-04-2016 APT61_RS11815 e6dea47729c7b71f36a735f938825095 524 PANTHER PTHR23501 485 516 5.8E-84 T 22-04-2016 APT61_RS11815 e6dea47729c7b71f36a735f938825095 524 PANTHER PTHR23501:SF71 12 466 5.8E-84 T 22-04-2016 APT61_RS11815 e6dea47729c7b71f36a735f938825095 524 PANTHER PTHR23501:SF71 485 516 5.8E-84 T 22-04-2016 APT61_RS11815 e6dea47729c7b71f36a735f938825095 524 Gene3D G3DSA:1.20.1250.20 20 198 1.3E-13 T 22-04-2016 APT61_RS18905 97d1b4c70c9651b26653978db054a23e 621 PANTHER PTHR16254:SF28 1 556 0.0 T 22-04-2016 APT61_RS18905 97d1b4c70c9651b26653978db054a23e 621 Pfam PF02254 TrkA-N domain 402 512 4.3E-25 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 APT61_RS18905 97d1b4c70c9651b26653978db054a23e 621 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 4.1E-8 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APT61_RS18905 97d1b4c70c9651b26653978db054a23e 621 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 4.1E-8 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APT61_RS18905 97d1b4c70c9651b26653978db054a23e 621 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 4.1E-8 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APT61_RS18905 97d1b4c70c9651b26653978db054a23e 621 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 4.1E-8 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 APT61_RS18905 97d1b4c70c9651b26653978db054a23e 621 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 285 3.7E-89 T 22-04-2016 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 APT61_RS18905 97d1b4c70c9651b26653978db054a23e 621 PANTHER PTHR16254 1 556 0.0 T 22-04-2016 APT61_RS18905 97d1b4c70c9651b26653978db054a23e 621 Pfam PF00999 Sodium/hydrogen exchanger family 11 378 2.6E-59 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APT61_RS18905 97d1b4c70c9651b26653978db054a23e 621 Hamap MF_01413 Glutathione-regulated potassium-efflux system protein KefC [kefC]. 1 608 55.487 T 22-04-2016 IPR023941 Glutathione-regulated potassium-efflux system protein KefC GO:0005887|GO:0006813|GO:0015503|GO:0015643|GO:0019899|GO:0051595 APT61_RS18905 97d1b4c70c9651b26653978db054a23e 621 Gene3D G3DSA:3.40.50.720 395 530 8.4E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS18905 97d1b4c70c9651b26653978db054a23e 621 SUPERFAMILY SSF51735 401 529 4.09E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS20610 c32d6c7f800671b60a822bbe1fd261a0 471 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 27 471 6.5E-146 T 22-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 APT61_RS20610 c32d6c7f800671b60a822bbe1fd261a0 471 PANTHER PTHR30576 3 471 7.9E-131 T 22-04-2016 APT61_RS20610 c32d6c7f800671b60a822bbe1fd261a0 471 Pfam PF02397 Bacterial sugar transferase 281 463 1.0E-57 T 22-04-2016 IPR003362 Bacterial sugar transferase APT61_RS20610 c32d6c7f800671b60a822bbe1fd261a0 471 PANTHER PTHR30576:SF0 3 471 7.9E-131 T 22-04-2016 APT61_RS20610 c32d6c7f800671b60a822bbe1fd261a0 471 Pfam PF13727 CoA-binding domain 116 245 7.5E-18 T 22-04-2016 APT61_RS20610 c32d6c7f800671b60a822bbe1fd261a0 471 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 19 471 2.6E-129 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase APT61_RS18810 dae0e4c5a27c1bf8b06d8151cb111561 327 SUPERFAMILY SSF53850 22 323 3.54E-64 T 22-04-2016 APT61_RS18810 dae0e4c5a27c1bf8b06d8151cb111561 327 Pfam PF13343 Bacterial extracellular solute-binding protein 73 291 2.5E-18 T 22-04-2016 APT61_RS18810 dae0e4c5a27c1bf8b06d8151cb111561 327 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 18 321 2.4E-149 T 22-04-2016 IPR005948 Thiamine ABC transporter periplasmic binding protein GO:0005215|GO:0006810|GO:0015888|GO:0030288|GO:0030975 APT61_RS18810 dae0e4c5a27c1bf8b06d8151cb111561 327 PANTHER PTHR30006 1 326 6.7E-136 T 22-04-2016 APT61_RS18810 dae0e4c5a27c1bf8b06d8151cb111561 327 PANTHER PTHR30006:SF3 1 326 6.7E-136 T 22-04-2016 APT61_RS18810 dae0e4c5a27c1bf8b06d8151cb111561 327 Gene3D G3DSA:3.40.190.10 122 258 1.4E-25 T 22-04-2016 APT61_RS18810 dae0e4c5a27c1bf8b06d8151cb111561 327 Gene3D G3DSA:3.40.190.10 259 317 2.7E-16 T 22-04-2016 APT61_RS18810 dae0e4c5a27c1bf8b06d8151cb111561 327 Gene3D G3DSA:3.40.190.10 6 120 2.7E-16 T 22-04-2016 APT61_RS18810 dae0e4c5a27c1bf8b06d8151cb111561 327 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 119 136 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 APT61_RS18810 dae0e4c5a27c1bf8b06d8151cb111561 327 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 8 327 4.7E-177 T 22-04-2016 IPR005967 Proteobacterial thiamine ABC transporter, periplasmic binding protein GO:0005524|GO:0015888|GO:0030288|GO:0048502 APT61_RS17640 7e51fb25aee21ea88867ef084b301c75 324 Gene3D G3DSA:3.20.20.70 3 319 4.8E-137 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS17640 7e51fb25aee21ea88867ef084b301c75 324 SMART SM01004 3 321 1.6E-207 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS17640 7e51fb25aee21ea88867ef084b301c75 324 PANTHER PTHR11458 1 319 1.8E-267 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS17640 7e51fb25aee21ea88867ef084b301c75 324 PANTHER PTHR11458:SF1 1 319 1.8E-267 T 22-04-2016 APT61_RS17640 7e51fb25aee21ea88867ef084b301c75 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 2.1E-54 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS17640 7e51fb25aee21ea88867ef084b301c75 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 2.1E-54 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS17640 7e51fb25aee21ea88867ef084b301c75 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 2.1E-54 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS17640 7e51fb25aee21ea88867ef084b301c75 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 2.1E-54 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS17640 7e51fb25aee21ea88867ef084b301c75 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 2.1E-54 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS17640 7e51fb25aee21ea88867ef084b301c75 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 2.1E-54 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS17640 7e51fb25aee21ea88867ef084b301c75 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS17640 7e51fb25aee21ea88867ef084b301c75 324 SUPERFAMILY SSF51569 5 319 4.69E-129 T 22-04-2016 APT61_RS17640 7e51fb25aee21ea88867ef084b301c75 324 PIRSF PIRSF001415 1 323 2.2E-146 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS17640 7e51fb25aee21ea88867ef084b301c75 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 319 2.5E-134 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 APT61_RS13775 0ba163575fde96a0b47c5147601ef546 375 SUPERFAMILY SSF56349 82 369 5.89E-49 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APT61_RS13775 0ba163575fde96a0b47c5147601ef546 375 SUPERFAMILY SSF54171 20 60 4.9E-5 T 22-04-2016 IPR016177 DNA-binding domain GO:0003677 APT61_RS13775 0ba163575fde96a0b47c5147601ef546 375 Gene3D G3DSA:1.10.150.130 82 188 3.0E-26 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APT61_RS13775 0ba163575fde96a0b47c5147601ef546 375 Pfam PF09003 Bacteriophage lambda integrase, N-terminal domain 1 72 3.9E-31 T 22-04-2016 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 APT61_RS13775 0ba163575fde96a0b47c5147601ef546 375 Pfam PF00589 Phage integrase family 193 364 2.3E-18 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS13775 0ba163575fde96a0b47c5147601ef546 375 Gene3D G3DSA:3.30.160.60 1 68 7.8E-25 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 APT61_RS13775 0ba163575fde96a0b47c5147601ef546 375 Gene3D G3DSA:1.10.443.10 192 371 1.7E-42 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS07490 b387611452022a9f65e999978e29bf64 313 PANTHER PTHR34294:SF2 4 313 5.1E-87 T 22-04-2016 APT61_RS07490 b387611452022a9f65e999978e29bf64 313 Pfam PF13384 Homeodomain-like domain 8 52 3.7E-6 T 22-04-2016 APT61_RS07490 b387611452022a9f65e999978e29bf64 313 SUPERFAMILY SSF100950 59 311 1.09E-53 T 22-04-2016 APT61_RS07490 b387611452022a9f65e999978e29bf64 313 Gene3D G3DSA:1.10.10.10 21 59 2.0E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS07490 b387611452022a9f65e999978e29bf64 313 PANTHER PTHR34294 4 313 5.1E-87 T 22-04-2016 APT61_RS07490 b387611452022a9f65e999978e29bf64 313 Gene3D G3DSA:3.40.50.1360 60 311 4.5E-60 T 22-04-2016 APT61_RS07490 b387611452022a9f65e999978e29bf64 313 Pfam PF04198 Putative sugar-binding domain 59 311 1.5E-66 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 APT61_RS08360 9b55d2f1f5d59c80d131e14fccc4b9af 185 Gene3D G3DSA:3.40.50.880 1 181 3.1E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS08360 9b55d2f1f5d59c80d131e14fccc4b9af 185 PANTHER PTHR11019 1 183 4.0E-82 T 22-04-2016 APT61_RS08360 9b55d2f1f5d59c80d131e14fccc4b9af 185 PANTHER PTHR11019:SF88 1 183 4.0E-82 T 22-04-2016 APT61_RS08360 9b55d2f1f5d59c80d131e14fccc4b9af 185 Pfam PF01965 DJ-1/PfpI family 3 164 4.3E-30 T 22-04-2016 IPR002818 DJ-1/PfpI APT61_RS08360 9b55d2f1f5d59c80d131e14fccc4b9af 185 SUPERFAMILY SSF52317 1 184 4.58E-43 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS08360 9b55d2f1f5d59c80d131e14fccc4b9af 185 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 171 2.9E-40 T 22-04-2016 IPR006287 DJ-1 APT61_RS05985 75643ee80f6e21350dae69567d3e8df1 514 Pfam PF00367 phosphotransferase system, EIIB 444 476 3.3E-12 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS05985 75643ee80f6e21350dae69567d3e8df1 514 PANTHER PTHR30009:SF5 5 514 3.6E-189 T 22-04-2016 APT61_RS05985 75643ee80f6e21350dae69567d3e8df1 514 PANTHER PTHR30009 5 514 3.6E-189 T 22-04-2016 APT61_RS05985 75643ee80f6e21350dae69567d3e8df1 514 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 409 500 1.4E-16 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS05985 75643ee80f6e21350dae69567d3e8df1 514 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 454 471 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS05985 75643ee80f6e21350dae69567d3e8df1 514 Pfam PF02378 Phosphotransferase system, EIIC 13 349 8.9E-64 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS05985 75643ee80f6e21350dae69567d3e8df1 514 Gene3D G3DSA:3.30.1360.60 443 513 7.5E-25 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS05985 75643ee80f6e21350dae69567d3e8df1 514 SUPERFAMILY SSF55604 443 512 1.22E-19 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 Pfam PF00672 HAMP domain 142 206 9.1E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 SMART SM00304 158 210 1.2E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 PANTHER PTHR24423:SF564 6 101 7.4E-140 T 22-04-2016 APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 PANTHER PTHR24423:SF564 152 426 7.4E-140 T 22-04-2016 APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 SUPERFAMILY SSF47384 194 271 3.34E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 Gene3D G3DSA:1.10.287.130 201 267 5.2E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 402 9.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 363 9.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 377 9.4E-13 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 Gene3D G3DSA:3.30.565.10 274 424 5.5E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 1.7E-7 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 SMART SM00388 211 271 3.2E-8 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 SMART SM00387 314 424 1.7E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 421 1.2E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 PANTHER PTHR24423 6 101 7.4E-140 T 22-04-2016 APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 PANTHER PTHR24423 152 426 7.4E-140 T 22-04-2016 APT61_RS12175 25a617e37ae6212eeb9b95eba5154859 432 SUPERFAMILY SSF55874 261 423 2.1E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 Gene3D G3DSA:3.40.190.10 31 152 8.8E-24 T 22-04-2016 APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 PANTHER PTHR30061 1 396 2.9E-139 T 22-04-2016 APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 SUPERFAMILY SSF53850 29 395 5.69E-96 T 22-04-2016 APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 PANTHER PTHR30061:SF21 1 396 2.9E-139 T 22-04-2016 APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 Gene3D G3DSA:3.40.190.10 153 322 2.4E-58 T 22-04-2016 APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 133 150 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 PRINTS PR00181 Maltose binding protein signature 233 252 1.2E-98 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 PRINTS PR00181 Maltose binding protein signature 299 320 1.2E-98 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 PRINTS PR00181 Maltose binding protein signature 70 88 1.2E-98 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 PRINTS PR00181 Maltose binding protein signature 36 54 1.2E-98 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 PRINTS PR00181 Maltose binding protein signature 357 376 1.2E-98 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 PRINTS PR00181 Maltose binding protein signature 130 149 1.2E-98 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 PRINTS PR00181 Maltose binding protein signature 171 190 1.2E-98 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 PRINTS PR00181 Maltose binding protein signature 151 170 1.2E-98 T 22-04-2016 IPR006060 Maltose binding protein GO:0005363|GO:0015768 APT61_RS20985 3b397cc548995ca0119ab2bcbf8c54e2 396 Pfam PF13416 Bacterial extracellular solute-binding protein 50 342 2.6E-43 T 22-04-2016 APT61_RS11875 f3a0206df92742f701d64fe841c8fded 319 SUPERFAMILY SSF46689 264 314 4.93E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS11875 f3a0206df92742f701d64fe841c8fded 319 Gene3D G3DSA:1.10.10.60 207 263 1.9E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS11875 f3a0206df92742f701d64fe841c8fded 319 SMART SM00342 227 310 3.4E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS11875 f3a0206df92742f701d64fe841c8fded 319 Gene3D G3DSA:1.10.10.60 264 313 8.0E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS11875 f3a0206df92742f701d64fe841c8fded 319 SUPERFAMILY SSF46689 210 260 7.17E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS11875 f3a0206df92742f701d64fe841c8fded 319 Pfam PF01965 DJ-1/PfpI family 6 171 3.9E-13 T 22-04-2016 IPR002818 DJ-1/PfpI APT61_RS11875 f3a0206df92742f701d64fe841c8fded 319 PANTHER PTHR11019:SF68 6 318 2.0E-90 T 22-04-2016 APT61_RS11875 f3a0206df92742f701d64fe841c8fded 319 SUPERFAMILY SSF52317 5 192 1.76E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS11875 f3a0206df92742f701d64fe841c8fded 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 264 306 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS11875 f3a0206df92742f701d64fe841c8fded 319 Gene3D G3DSA:3.40.50.880 5 190 3.9E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS11875 f3a0206df92742f701d64fe841c8fded 319 PANTHER PTHR11019 6 318 2.0E-90 T 22-04-2016 APT61_RS11875 f3a0206df92742f701d64fe841c8fded 319 Pfam PF12833 Helix-turn-helix domain 233 311 1.9E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS15980 8f0a4cff4ceb8825fb6362eb201c6195 347 SUPERFAMILY SSF142754 29 341 3.66E-106 T 22-04-2016 APT61_RS15980 8f0a4cff4ceb8825fb6362eb201c6195 347 Pfam PF02445 Quinolinate synthetase A protein 31 340 1.0E-100 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APT61_RS15980 8f0a4cff4ceb8825fb6362eb201c6195 347 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 71.061 T 22-04-2016 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APT61_RS15980 8f0a4cff4ceb8825fb6362eb201c6195 347 PANTHER PTHR30573 1 346 5.6E-170 T 22-04-2016 APT61_RS15980 8f0a4cff4ceb8825fb6362eb201c6195 347 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 25 341 1.4E-122 T 22-04-2016 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APT61_RS15040 2b113323cb63051d7ee2c9b051c0aae3 204 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 1.8E-57 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like APT61_RS15040 2b113323cb63051d7ee2c9b051c0aae3 204 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 202 1.1E-117 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 APT61_RS15040 2b113323cb63051d7ee2c9b051c0aae3 204 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 8 201 32.742 T 22-04-2016 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 APT61_RS15040 2b113323cb63051d7ee2c9b051c0aae3 204 Gene3D G3DSA:2.50.20.10 23 202 1.6E-58 T 22-04-2016 APT61_RS15040 2b113323cb63051d7ee2c9b051c0aae3 204 PANTHER PTHR35869 1 204 9.1E-63 T 22-04-2016 APT61_RS15040 2b113323cb63051d7ee2c9b051c0aae3 204 SUPERFAMILY SSF89392 22 202 1.26E-55 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX APT61_RS10455 ca9891757e6721e19cbf3b42893161ef 343 Gene3D G3DSA:3.20.20.210 2 340 1.6E-88 T 22-04-2016 APT61_RS10455 ca9891757e6721e19cbf3b42893161ef 343 SUPERFAMILY SSF51726 7 340 4.71E-69 T 22-04-2016 APT61_RS10455 ca9891757e6721e19cbf3b42893161ef 343 PIRSF PIRSF005632 1 343 1.1E-197 T 22-04-2016 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit APT61_RS10455 ca9891757e6721e19cbf3b42893161ef 343 PANTHER PTHR30519 4 216 1.3E-100 T 22-04-2016 APT61_RS10455 ca9891757e6721e19cbf3b42893161ef 343 PANTHER PTHR30519 235 343 1.3E-100 T 22-04-2016 APT61_RS10455 ca9891757e6721e19cbf3b42893161ef 343 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 5 329 4.1E-38 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APT61_RS09105 c3e1f6fcc34476faa7e76ff6968095ec 757 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 18 748 4.2E-294 T 22-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 APT61_RS09105 c3e1f6fcc34476faa7e76ff6968095ec 757 SUPERFAMILY SSF53706 52 620 1.2E-148 T 22-04-2016 APT61_RS09105 c3e1f6fcc34476faa7e76ff6968095ec 757 Gene3D G3DSA:3.40.50.740 114 186 8.4E-54 T 22-04-2016 APT61_RS09105 c3e1f6fcc34476faa7e76ff6968095ec 757 Gene3D G3DSA:3.40.50.740 389 619 8.4E-54 T 22-04-2016 APT61_RS09105 c3e1f6fcc34476faa7e76ff6968095ec 757 PANTHER PTHR11615:SF114 275 755 3.5E-243 T 22-04-2016 APT61_RS09105 c3e1f6fcc34476faa7e76ff6968095ec 757 PANTHER PTHR11615:SF114 29 256 3.5E-243 T 22-04-2016 APT61_RS09105 c3e1f6fcc34476faa7e76ff6968095ec 757 PANTHER PTHR11615 275 755 3.5E-243 T 22-04-2016 APT61_RS09105 c3e1f6fcc34476faa7e76ff6968095ec 757 PANTHER PTHR11615 29 256 3.5E-243 T 22-04-2016 APT61_RS09105 c3e1f6fcc34476faa7e76ff6968095ec 757 Gene3D G3DSA:2.40.40.20 633 748 1.4E-13 T 22-04-2016 APT61_RS09105 c3e1f6fcc34476faa7e76ff6968095ec 757 Gene3D G3DSA:3.40.228.10 187 388 2.0E-57 T 22-04-2016 APT61_RS09105 c3e1f6fcc34476faa7e76ff6968095ec 757 Pfam PF01568 Molydopterin dinucleotide binding domain 637 744 1.7E-16 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS09105 c3e1f6fcc34476faa7e76ff6968095ec 757 SUPERFAMILY SSF50692 630 748 3.62E-20 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS09105 c3e1f6fcc34476faa7e76ff6968095ec 757 Pfam PF00384 Molybdopterin oxidoreductase 114 479 1.5E-25 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS09105 c3e1f6fcc34476faa7e76ff6968095ec 757 PIRSF PIRSF000144 1 754 0.0 T 22-04-2016 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 APT61_RS03675 38bd4bcde709ca97ba17b9e2b8aa96ac 219 Gene3D G3DSA:1.10.10.10 123 216 2.6E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03675 38bd4bcde709ca97ba17b9e2b8aa96ac 219 Pfam PF00072 Response regulator receiver domain 3 112 1.3E-21 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS03675 38bd4bcde709ca97ba17b9e2b8aa96ac 219 Gene3D G3DSA:3.40.50.2300 1 122 1.1E-35 T 22-04-2016 APT61_RS03675 38bd4bcde709ca97ba17b9e2b8aa96ac 219 SUPERFAMILY SSF46894 118 216 6.24E-27 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS03675 38bd4bcde709ca97ba17b9e2b8aa96ac 219 SMART SM00862 145 216 6.6E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS03675 38bd4bcde709ca97ba17b9e2b8aa96ac 219 SUPERFAMILY SSF52172 1 118 2.56E-34 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS03675 38bd4bcde709ca97ba17b9e2b8aa96ac 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 4.1E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS03675 38bd4bcde709ca97ba17b9e2b8aa96ac 219 SMART SM00448 1 112 5.4E-37 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS03675 38bd4bcde709ca97ba17b9e2b8aa96ac 219 PANTHER PTHR26402:SF279 1 218 9.4E-135 T 22-04-2016 APT61_RS03675 38bd4bcde709ca97ba17b9e2b8aa96ac 219 PANTHER PTHR26402 1 218 9.4E-135 T 22-04-2016 APT61_RS09260 a3c9bf77593cabecafb33cf0a67098f3 262 SUPERFAMILY SSF52540 4 235 2.92E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09260 a3c9bf77593cabecafb33cf0a67098f3 262 PANTHER PTHR24220:SF361 6 258 6.7E-114 T 22-04-2016 APT61_RS09260 a3c9bf77593cabecafb33cf0a67098f3 262 SMART SM00382 33 216 8.3E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS09260 a3c9bf77593cabecafb33cf0a67098f3 262 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS09260 a3c9bf77593cabecafb33cf0a67098f3 262 Pfam PF00005 ABC transporter 24 166 4.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS09260 a3c9bf77593cabecafb33cf0a67098f3 262 PANTHER PTHR24220 6 258 6.7E-114 T 22-04-2016 APT61_RS09260 a3c9bf77593cabecafb33cf0a67098f3 262 TIGRFAM TIGR01184 ntrCD: nitrate ABC transporter, ATP-binding proteins C and D 24 254 4.8E-103 T 22-04-2016 IPR005890 Nitrate transport ATP-binding subunit C/D GO:0015112|GO:0015706|GO:0016020 APT61_RS09260 a3c9bf77593cabecafb33cf0a67098f3 262 Gene3D G3DSA:3.40.50.300 2 219 2.8E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13855 0de6690374ecb988691527e4d113cba5 303 PANTHER PTHR18964 1 303 3.8E-163 T 22-04-2016 APT61_RS13855 0de6690374ecb988691527e4d113cba5 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family APT61_RS13855 0de6690374ecb988691527e4d113cba5 303 Gene3D G3DSA:3.30.420.40 1 131 2.5E-41 T 22-04-2016 APT61_RS13855 0de6690374ecb988691527e4d113cba5 303 Gene3D G3DSA:3.30.420.40 132 278 4.2E-46 T 22-04-2016 APT61_RS13855 0de6690374ecb988691527e4d113cba5 303 SUPERFAMILY SSF53067 1 301 2.52E-59 T 22-04-2016 APT61_RS13855 0de6690374ecb988691527e4d113cba5 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 64.059 T 22-04-2016 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906|UniPathway: UPA00544 APT61_RS13855 0de6690374ecb988691527e4d113cba5 303 Pfam PF00480 ROK family 2 300 3.6E-68 T 22-04-2016 IPR000600 ROK family APT61_RS13855 0de6690374ecb988691527e4d113cba5 303 PANTHER PTHR18964:SF134 1 303 3.8E-163 T 22-04-2016 APT61_RS19140 4ffc1a548ca44aaa61bb561748b71c70 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.37 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APT61_RS19140 4ffc1a548ca44aaa61bb561748b71c70 239 SUPERFAMILY SSF53167 3 234 7.72E-94 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APT61_RS19140 4ffc1a548ca44aaa61bb561748b71c70 239 PANTHER PTHR21234:SF8 3 234 7.3E-84 T 22-04-2016 APT61_RS19140 4ffc1a548ca44aaa61bb561748b71c70 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APT61_RS19140 4ffc1a548ca44aaa61bb561748b71c70 239 Gene3D G3DSA:3.40.50.1580 10 233 1.3E-83 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APT61_RS19140 4ffc1a548ca44aaa61bb561748b71c70 239 Pfam PF01048 Phosphorylase superfamily 15 218 4.0E-40 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 APT61_RS19140 4ffc1a548ca44aaa61bb561748b71c70 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 2.1E-127 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 APT61_RS19140 4ffc1a548ca44aaa61bb561748b71c70 239 PANTHER PTHR21234 3 234 7.3E-84 T 22-04-2016 IPR018017 Nucleoside phosphorylase APT61_RS03745 b94f2744eb5680c4d565b8b65d2067c1 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 134 2.2E-31 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 APT61_RS03745 b94f2744eb5680c4d565b8b65d2067c1 141 PANTHER PTHR30558 11 136 7.6E-75 T 22-04-2016 APT61_RS03745 b94f2744eb5680c4d565b8b65d2067c1 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 1.8E-67 T 22-04-2016 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 APT61_RS03745 b94f2744eb5680c4d565b8b65d2067c1 141 PANTHER PTHR30558:SF9 11 136 7.6E-75 T 22-04-2016 APT61_RS05655 7aff71fb3a188a267bee33bc14aa61e2 245 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 243 1.1E-87 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD APT61_RS05655 7aff71fb3a188a267bee33bc14aa61e2 245 PANTHER PTHR37423 1 245 3.3E-116 T 22-04-2016 APT61_RS05655 7aff71fb3a188a267bee33bc14aa61e2 245 SUPERFAMILY SSF48452 25 121 6.72E-9 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS05655 7aff71fb3a188a267bee33bc14aa61e2 245 Pfam PF13525 Outer membrane lipoprotein 28 236 6.0E-84 T 22-04-2016 APT61_RS05655 7aff71fb3a188a267bee33bc14aa61e2 245 Gene3D G3DSA:1.25.40.10 34 203 7.7E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS05655 7aff71fb3a188a267bee33bc14aa61e2 245 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 243 47.772 T 22-04-2016 IPR017689 Outer membrane protein assembly factor BamD APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 Pfam PF00171 Aldehyde dehydrogenase family 659 1107 4.0E-112 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 610 1112 9.5E-263 T 22-04-2016 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 PANTHER PTHR11699:SF18 632 1108 4.7E-182 T 22-04-2016 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 SUPERFAMILY SSF51730 262 616 1.06E-122 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 Gene3D G3DSA:3.20.20.220 261 616 9.1E-121 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 Gene3D G3DSA:3.40.605.10 654 897 1.4E-65 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 Gene3D G3DSA:1.20.5.550 87 138 1.1E-23 T 22-04-2016 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 882 889 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 147 259 1.9E-46 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 SUPERFAMILY SSF47598 3 45 8.15E-11 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 PANTHER PTHR11699 632 1108 4.7E-182 T 22-04-2016 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 PIRSF PIRSF000197 74 1320 0.0 T 22-04-2016 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 SUPERFAMILY SSF53720 656 1110 5.63E-125 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 910 921 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 Pfam PF01619 Proline dehydrogenase 270 569 1.7E-98 T 22-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 Gene3D G3DSA:1.10.2060.10 143 260 4.9E-55 T 22-04-2016 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 Gene3D G3DSA:3.40.309.10 898 1090 1.1E-45 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS14370 a2e7288d2a4e194db5458492438052e5 1320 SUPERFAMILY SSF81935 88 261 1.03E-65 T 22-04-2016 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922|UniPathway: UPA00261|UniPathway: UPA00261 APT61_RS00090 c3b71bf4711e3aa1b27244fe210b0b34 230 SUPERFAMILY SSF48008 105 226 1.52E-19 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS00090 c3b71bf4711e3aa1b27244fe210b0b34 230 Pfam PF07729 FCD domain 108 226 9.6E-20 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS00090 c3b71bf4711e3aa1b27244fe210b0b34 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 7.1E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS00090 c3b71bf4711e3aa1b27244fe210b0b34 230 PANTHER PTHR11751:SF408 18 84 1.4E-50 T 22-04-2016 APT61_RS00090 c3b71bf4711e3aa1b27244fe210b0b34 230 PANTHER PTHR11751:SF408 104 122 1.4E-50 T 22-04-2016 APT61_RS00090 c3b71bf4711e3aa1b27244fe210b0b34 230 Gene3D G3DSA:1.10.10.10 11 87 2.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00090 c3b71bf4711e3aa1b27244fe210b0b34 230 SMART SM00895 106 227 1.5E-15 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS00090 c3b71bf4711e3aa1b27244fe210b0b34 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS00090 c3b71bf4711e3aa1b27244fe210b0b34 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.0E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS00090 c3b71bf4711e3aa1b27244fe210b0b34 230 SMART SM00345 18 77 3.9E-18 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS00090 c3b71bf4711e3aa1b27244fe210b0b34 230 PANTHER PTHR11751 18 84 1.4E-50 T 22-04-2016 APT61_RS00090 c3b71bf4711e3aa1b27244fe210b0b34 230 PANTHER PTHR11751 104 122 1.4E-50 T 22-04-2016 APT61_RS00090 c3b71bf4711e3aa1b27244fe210b0b34 230 SUPERFAMILY SSF46785 10 81 1.01E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00090 c3b71bf4711e3aa1b27244fe210b0b34 230 Gene3D G3DSA:1.20.120.530 104 225 2.9E-18 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS09730 8b0c9853b8094b3ac3c2116ec04d1810 225 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 3 191 8.6E-77 T 22-04-2016 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-6317|MetaCyc: PWY-7459 APT61_RS09730 8b0c9853b8094b3ac3c2116ec04d1810 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 134 150 8.3E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS09730 8b0c9853b8094b3ac3c2116ec04d1810 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 172 8.3E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS09730 8b0c9853b8094b3ac3c2116ec04d1810 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 8.3E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS09730 8b0c9853b8094b3ac3c2116ec04d1810 225 Gene3D G3DSA:1.10.150.240 17 93 1.1E-27 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APT61_RS09730 8b0c9853b8094b3ac3c2116ec04d1810 225 PANTHER PTHR18901:SF19 1 197 3.6E-77 T 22-04-2016 APT61_RS09730 8b0c9853b8094b3ac3c2116ec04d1810 225 Gene3D G3DSA:3.40.50.1000 1 16 4.1E-31 T 22-04-2016 IPR023214 HAD-like domain APT61_RS09730 8b0c9853b8094b3ac3c2116ec04d1810 225 Gene3D G3DSA:3.40.50.1000 96 206 4.1E-31 T 22-04-2016 IPR023214 HAD-like domain APT61_RS09730 8b0c9853b8094b3ac3c2116ec04d1810 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 90 190 3.2E-17 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS09730 8b0c9853b8094b3ac3c2116ec04d1810 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 189 3.5E-21 T 22-04-2016 IPR023214 HAD-like domain APT61_RS09730 8b0c9853b8094b3ac3c2116ec04d1810 225 SUPERFAMILY SSF56784 2 198 9.13E-44 T 22-04-2016 IPR023214 HAD-like domain APT61_RS09730 8b0c9853b8094b3ac3c2116ec04d1810 225 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 4 190 3.5E-59 T 22-04-2016 IPR010976 Beta-phosphoglucomutase hydrolase APT61_RS09730 8b0c9853b8094b3ac3c2116ec04d1810 225 PANTHER PTHR18901 1 197 3.6E-77 T 22-04-2016 APT61_RS18115 bf093a89f03c9e9fca4b3a9e0cd84f72 217 SUPERFAMILY SSF161098 9 201 7.19E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS18115 bf093a89f03c9e9fca4b3a9e0cd84f72 217 PANTHER PTHR30450 1 217 6.6E-123 T 22-04-2016 APT61_RS18115 bf093a89f03c9e9fca4b3a9e0cd84f72 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 214 7.7E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS18115 bf093a89f03c9e9fca4b3a9e0cd84f72 217 Gene3D G3DSA:1.10.3720.10 9 214 6.9E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS18115 bf093a89f03c9e9fca4b3a9e0cd84f72 217 PANTHER PTHR30450:SF1 1 217 6.6E-123 T 22-04-2016 APT61_RS18305 acb3ba1b34897ff27d51f36bb53c44b7 266 PANTHER PTHR30535 25 262 6.2E-45 T 22-04-2016 APT61_RS18305 acb3ba1b34897ff27d51f36bb53c44b7 266 Gene3D G3DSA:3.40.50.1980 143 262 3.0E-32 T 22-04-2016 APT61_RS18305 acb3ba1b34897ff27d51f36bb53c44b7 266 SUPERFAMILY SSF53807 25 262 5.1E-53 T 22-04-2016 APT61_RS18305 acb3ba1b34897ff27d51f36bb53c44b7 266 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 266 45.944 T 22-04-2016 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 APT61_RS18305 acb3ba1b34897ff27d51f36bb53c44b7 266 Pfam PF01497 Periplasmic binding protein 26 220 6.7E-21 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APT61_RS18305 acb3ba1b34897ff27d51f36bb53c44b7 266 Gene3D G3DSA:3.40.50.1980 24 139 2.8E-31 T 22-04-2016 APT61_RS18980 efe9337115e765fe4ab85157e4261cea 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 9.5E-34 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS18980 efe9337115e765fe4ab85157e4261cea 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 8.0E-35 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS18980 efe9337115e765fe4ab85157e4261cea 87 Pfam PF01649 Ribosomal protein S20 2 84 9.0E-28 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS18980 efe9337115e765fe4ab85157e4261cea 87 SUPERFAMILY SSF46992 3 86 4.58E-31 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS18980 efe9337115e765fe4ab85157e4261cea 87 Gene3D G3DSA:1.20.58.110 3 87 1.9E-31 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS18980 efe9337115e765fe4ab85157e4261cea 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.057 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS18980 efe9337115e765fe4ab85157e4261cea 87 PANTHER PTHR33398 2 87 5.7E-39 T 22-04-2016 APT61_RS02695 58f7dd280ef40b2bd59deb3a19630552 97 SUPERFAMILY SSF52091 12 91 5.89E-14 T 22-04-2016 IPR002645 STAS domain APT61_RS02695 58f7dd280ef40b2bd59deb3a19630552 97 Pfam PF13466 STAS domain 16 90 3.8E-17 T 22-04-2016 IPR002645 STAS domain APT61_RS02695 58f7dd280ef40b2bd59deb3a19630552 97 PANTHER PTHR35849:SF1 1 94 6.5E-30 T 22-04-2016 APT61_RS02695 58f7dd280ef40b2bd59deb3a19630552 97 PANTHER PTHR35849 1 94 6.5E-30 T 22-04-2016 APT61_RS02695 58f7dd280ef40b2bd59deb3a19630552 97 Gene3D G3DSA:3.30.750.24 14 90 6.2E-12 T 22-04-2016 IPR002645 STAS domain APT61_RS18070 a606340fc5a9a045fea235566fb13884 267 PANTHER PTHR11732:SF100 1 267 1.9E-172 T 22-04-2016 APT61_RS18070 a606340fc5a9a045fea235566fb13884 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 3.6E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS18070 a606340fc5a9a045fea235566fb13884 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 3.6E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS18070 a606340fc5a9a045fea235566fb13884 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 3.6E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS18070 a606340fc5a9a045fea235566fb13884 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 3.6E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS18070 a606340fc5a9a045fea235566fb13884 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 3.6E-44 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS18070 a606340fc5a9a045fea235566fb13884 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APT61_RS18070 a606340fc5a9a045fea235566fb13884 267 Gene3D G3DSA:3.20.20.100 1 259 4.8E-87 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS18070 a606340fc5a9a045fea235566fb13884 267 SUPERFAMILY SSF51430 2 257 6.02E-80 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS18070 a606340fc5a9a045fea235566fb13884 267 PANTHER PTHR11732 1 267 1.9E-172 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS18070 a606340fc5a9a045fea235566fb13884 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APT61_RS18070 a606340fc5a9a045fea235566fb13884 267 PIRSF PIRSF000097 1 265 1.5E-66 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS18070 a606340fc5a9a045fea235566fb13884 267 Pfam PF00248 Aldo/keto reductase family 8 250 5.9E-50 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS01690 c81f08395e8d7820f42dfbc424ad70cb 191 Gene3D G3DSA:2.60.300.12 1 97 1.2E-17 T 22-04-2016 IPR000361 FeS cluster biogenesis APT61_RS01690 c81f08395e8d7820f42dfbc424ad70cb 191 Pfam PF01106 NifU-like domain 111 177 3.3E-20 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APT61_RS01690 c81f08395e8d7820f42dfbc424ad70cb 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 2.0E-27 T 22-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 APT61_RS01690 c81f08395e8d7820f42dfbc424ad70cb 191 PANTHER PTHR10072 1 97 3.2E-95 T 22-04-2016 APT61_RS01690 c81f08395e8d7820f42dfbc424ad70cb 191 PANTHER PTHR10072 147 188 3.2E-95 T 22-04-2016 APT61_RS01690 c81f08395e8d7820f42dfbc424ad70cb 191 SUPERFAMILY SSF117916 95 184 3.05E-25 T 22-04-2016 APT61_RS01690 c81f08395e8d7820f42dfbc424ad70cb 191 PANTHER PTHR10072:SF37 1 97 3.2E-95 T 22-04-2016 APT61_RS01690 c81f08395e8d7820f42dfbc424ad70cb 191 PANTHER PTHR10072:SF37 147 188 3.2E-95 T 22-04-2016 APT61_RS01690 c81f08395e8d7820f42dfbc424ad70cb 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 99 1.8E-12 T 22-04-2016 IPR000361 FeS cluster biogenesis APT61_RS01690 c81f08395e8d7820f42dfbc424ad70cb 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 9.5E-101 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 APT61_RS01690 c81f08395e8d7820f42dfbc424ad70cb 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.48 T 22-04-2016 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 APT61_RS01690 c81f08395e8d7820f42dfbc424ad70cb 191 SUPERFAMILY SSF89360 1 97 7.06E-21 T 22-04-2016 IPR000361 FeS cluster biogenesis APT61_RS02955 ea3a540d44c004d07bf3e894227e5102 357 Gene3D G3DSA:3.10.380.10 267 357 1.7E-35 T 22-04-2016 IPR009105 Colicin E3-like ribonuclease domain GO:0003723|GO:0009405|GO:0016788|GO:0043022 APT61_RS02955 ea3a540d44c004d07bf3e894227e5102 357 Pfam PF06958 S-type Pyocin 134 265 8.9E-32 T 22-04-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 APT61_RS02955 ea3a540d44c004d07bf3e894227e5102 357 SUPERFAMILY SSF69369 86 314 4.97E-16 T 22-04-2016 IPR016128 Pyosin/cloacin translocation domain GO:0009405 APT61_RS02955 ea3a540d44c004d07bf3e894227e5102 357 SUPERFAMILY SSF63840 267 357 9.81E-29 T 22-04-2016 IPR009105 Colicin E3-like ribonuclease domain GO:0003723|GO:0009405|GO:0016788|GO:0043022 APT61_RS02955 ea3a540d44c004d07bf3e894227e5102 357 Pfam PF09000 Cytotoxic 281 356 2.1E-31 T 22-04-2016 IPR009105 Colicin E3-like ribonuclease domain GO:0003723|GO:0009405|GO:0016788|GO:0043022 APT61_RS15570 e029f08f0120d71c9a3d7f7e7506446e 220 PANTHER PTHR10683 1 220 1.5E-132 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS15570 e029f08f0120d71c9a3d7f7e7506446e 220 Gene3D G3DSA:3.20.20.70 1 213 1.0E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS15570 e029f08f0120d71c9a3d7f7e7506446e 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 1.1E-82 T 22-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS15570 e029f08f0120d71c9a3d7f7e7506446e 220 PANTHER PTHR10683:SF15 1 220 1.5E-132 T 22-04-2016 APT61_RS15570 e029f08f0120d71c9a3d7f7e7506446e 220 SUPERFAMILY SSF51569 1 216 1.26E-61 T 22-04-2016 APT61_RS15570 e029f08f0120d71c9a3d7f7e7506446e 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS15570 e029f08f0120d71c9a3d7f7e7506446e 220 Pfam PF00923 Transaldolase 3 206 1.8E-43 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS15570 e029f08f0120d71c9a3d7f7e7506446e 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 49.081 T 22-04-2016 IPR023001 Fructose-6-phosphate aldolase GO:0016832 APT61_RS15570 e029f08f0120d71c9a3d7f7e7506446e 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 ProSitePatterns PS01312 SecA family signature. 500 515 - T 22-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 SUPERFAMILY SSF52540 368 415 1.2E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 SUPERFAMILY SSF52540 5 228 1.2E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 SUPERFAMILY SSF81886 620 840 5.89E-86 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 SUPERFAMILY SSF81886 877 889 5.89E-86 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 Pfam PF01043 SecA preprotein cross-linking domain 232 358 1.7E-39 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 Gene3D G3DSA:3.90.1440.10 230 368 2.9E-46 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 Pfam PF07516 SecA Wing and Scaffold domain 617 830 2.0E-69 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 SUPERFAMILY SSF52540 416 618 1.68E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 Gene3D G3DSA:3.40.50.300 417 619 5.2E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 SMART SM00957 6 402 0.0 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 SMART SM00958 228 358 6.5E-83 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 PANTHER PTHR30612 550 901 0.0 T 22-04-2016 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 PANTHER PTHR30612 1 520 0.0 T 22-04-2016 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 Gene3D G3DSA:1.10.3060.10 648 831 4.4E-61 T 22-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.909 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 Gene3D G3DSA:3.40.50.300 2 228 1.2E-123 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 Gene3D G3DSA:3.40.50.300 369 416 1.2E-123 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 SUPERFAMILY SSF81767 227 368 7.59E-44 T 22-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 PRINTS PR00906 SecA protein signature 63 87 6.6E-74 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 PRINTS PR00906 SecA protein signature 339 361 6.6E-74 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 PRINTS PR00906 SecA protein signature 117 127 6.6E-74 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 PRINTS PR00906 SecA protein signature 101 115 6.6E-74 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 PRINTS PR00906 SecA protein signature 376 393 6.6E-74 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 PRINTS PR00906 SecA protein signature 413 426 6.6E-74 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 PRINTS PR00906 SecA protein signature 170 190 6.6E-74 T 22-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 Pfam PF02810 SEC-C motif 881 899 9.9E-11 T 22-04-2016 IPR004027 SEC-C motif APT61_RS18570 2c332c1485cdced9867d38b34b126bce 901 Pfam PF07517 SecA DEAD-like domain 7 402 2.3E-130 T 22-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 APT61_RS05465 55735502a355deb0ba16121bbbaea866 154 PANTHER PTHR34986:SF2 2 154 1.9E-67 T 22-04-2016 APT61_RS05465 55735502a355deb0ba16121bbbaea866 154 Gene3D G3DSA:2.60.120.370 1 152 1.3E-48 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APT61_RS05465 55735502a355deb0ba16121bbbaea866 154 PANTHER PTHR34986 2 154 1.9E-67 T 22-04-2016 APT61_RS05465 55735502a355deb0ba16121bbbaea866 154 Pfam PF04074 Domain of unknown function (DUF386) 1 149 2.3E-42 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APT61_RS05465 55735502a355deb0ba16121bbbaea866 154 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 3.9E-50 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APT61_RS05465 55735502a355deb0ba16121bbbaea866 154 SUPERFAMILY SSF51197 1 153 8.51E-44 T 22-04-2016 APT61_RS04640 77de140f0cbd57ef2b15e2edd4d084f4 404 PANTHER PTHR11926:SF16 1 162 1.3E-29 T 22-04-2016 APT61_RS04640 77de140f0cbd57ef2b15e2edd4d084f4 404 PANTHER PTHR11926:SF16 189 377 1.3E-29 T 22-04-2016 APT61_RS04640 77de140f0cbd57ef2b15e2edd4d084f4 404 SUPERFAMILY SSF53756 1 395 1.52E-67 T 22-04-2016 APT61_RS04640 77de140f0cbd57ef2b15e2edd4d084f4 404 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 230 374 1.4E-8 T 22-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 APT61_RS04640 77de140f0cbd57ef2b15e2edd4d084f4 404 PANTHER PTHR11926 1 162 1.3E-29 T 22-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 APT61_RS04640 77de140f0cbd57ef2b15e2edd4d084f4 404 PANTHER PTHR11926 189 377 1.3E-29 T 22-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 APT61_RS04640 77de140f0cbd57ef2b15e2edd4d084f4 404 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 8 394 9.3E-40 T 22-04-2016 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 APT61_RS04640 77de140f0cbd57ef2b15e2edd4d084f4 404 ProSitePatterns PS00375 UDP-glycosyltransferases signature. 288 329 - T 22-04-2016 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0008152|GO:0016758 APT61_RS04640 77de140f0cbd57ef2b15e2edd4d084f4 404 Gene3D G3DSA:3.40.50.2000 6 220 5.0E-12 T 22-04-2016 APT61_RS04640 77de140f0cbd57ef2b15e2edd4d084f4 404 Gene3D G3DSA:3.40.50.2000 228 377 2.4E-19 T 22-04-2016 APT61_RS21320 4df956c12e04aae5b4ec67ed99f34507 148 SUPERFAMILY SSF55729 1 137 3.95E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS21320 4df956c12e04aae5b4ec67ed99f34507 148 Gene3D G3DSA:3.40.630.30 2 146 1.2E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS21320 4df956c12e04aae5b4ec67ed99f34507 148 Pfam PF13673 Acetyltransferase (GNAT) domain 45 125 1.2E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS21320 4df956c12e04aae5b4ec67ed99f34507 148 PANTHER PTHR23091:SF266 1 123 8.1E-24 T 22-04-2016 APT61_RS21320 4df956c12e04aae5b4ec67ed99f34507 148 PANTHER PTHR23091 1 123 8.1E-24 T 22-04-2016 APT61_RS18515 912b7eb64b5058851cb6ef80e84acf60 284 PANTHER PTHR38684 2 284 1.5E-97 T 22-04-2016 APT61_RS18515 912b7eb64b5058851cb6ef80e84acf60 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 8.8E-156 T 22-04-2016 IPR031347 Protein AmpE APT61_RS19490 3df08c7e32c28d9953e1d60f6894be3e 717 Pfam PF02554 Carbon starvation protein CstA 34 405 2.6E-162 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 APT61_RS19490 3df08c7e32c28d9953e1d60f6894be3e 717 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 487 614 1.6E-33 T 22-04-2016 IPR025299 CstA, C-terminal domain APT61_RS19490 3df08c7e32c28d9953e1d60f6894be3e 717 PANTHER PTHR30252 429 716 0.0 T 22-04-2016 APT61_RS19490 3df08c7e32c28d9953e1d60f6894be3e 717 PANTHER PTHR30252 8 403 0.0 T 22-04-2016 APT61_RS19490 3df08c7e32c28d9953e1d60f6894be3e 717 PANTHER PTHR30252:SF3 429 716 0.0 T 22-04-2016 APT61_RS19490 3df08c7e32c28d9953e1d60f6894be3e 717 PANTHER PTHR30252:SF3 8 403 0.0 T 22-04-2016 APT61_RS11825 f294a684cd58220cbea5378e93c97325 459 PANTHER PTHR11751 78 450 4.9E-100 T 22-04-2016 APT61_RS11825 f294a684cd58220cbea5378e93c97325 459 Gene3D G3DSA:1.10.10.10 3 67 2.0E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11825 f294a684cd58220cbea5378e93c97325 459 Gene3D G3DSA:3.40.640.10 132 344 9.0E-53 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS11825 f294a684cd58220cbea5378e93c97325 459 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 4.0E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS11825 f294a684cd58220cbea5378e93c97325 459 SUPERFAMILY SSF53383 96 446 3.67E-78 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS11825 f294a684cd58220cbea5378e93c97325 459 SMART SM00345 6 65 6.2E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS11825 f294a684cd58220cbea5378e93c97325 459 PANTHER PTHR11751:SF10 78 450 4.9E-100 T 22-04-2016 APT61_RS11825 f294a684cd58220cbea5378e93c97325 459 SUPERFAMILY SSF46785 3 67 8.5E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19880 77ee5e61f0d7b0da0a5954a4d3f85aea 459 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 59 84 - T 22-04-2016 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 APT61_RS19880 77ee5e61f0d7b0da0a5954a4d3f85aea 459 SUPERFAMILY SSF103473 10 422 1.31E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS19880 77ee5e61f0d7b0da0a5954a4d3f85aea 459 PANTHER PTHR11328:SF24 1 458 7.9E-165 T 22-04-2016 APT61_RS19880 77ee5e61f0d7b0da0a5954a4d3f85aea 459 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 8 440 3.1E-151 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 APT61_RS19880 77ee5e61f0d7b0da0a5954a4d3f85aea 459 Gene3D G3DSA:1.20.1250.20 231 414 1.1E-10 T 22-04-2016 APT61_RS19880 77ee5e61f0d7b0da0a5954a4d3f85aea 459 Gene3D G3DSA:1.20.1250.20 17 203 1.2E-13 T 22-04-2016 APT61_RS19880 77ee5e61f0d7b0da0a5954a4d3f85aea 459 Pfam PF13347 MFS/sugar transport protein 10 429 1.2E-104 T 22-04-2016 APT61_RS19880 77ee5e61f0d7b0da0a5954a4d3f85aea 459 PANTHER PTHR11328 1 458 7.9E-165 T 22-04-2016 APT61_RS19080 89df4bb38f1b5595df069d89db068076 156 PANTHER PTHR37952:SF2 1 155 9.0E-89 T 22-04-2016 APT61_RS19080 89df4bb38f1b5595df069d89db068076 156 PANTHER PTHR37952 1 155 9.0E-89 T 22-04-2016 APT61_RS19080 89df4bb38f1b5595df069d89db068076 156 PIRSF PIRSF003174 1 156 1.5E-68 T 22-04-2016 IPR010292 Uncharacterised protein family CreA APT61_RS19080 89df4bb38f1b5595df069d89db068076 156 Pfam PF05981 CreA protein 24 155 1.9E-57 T 22-04-2016 IPR010292 Uncharacterised protein family CreA APT61_RS19445 94c4f7df01df20aeba618ccf8e5673de 295 Gene3D G3DSA:3.90.25.10 171 183 1.4E-29 T 22-04-2016 APT61_RS19445 94c4f7df01df20aeba618ccf8e5673de 295 Gene3D G3DSA:3.90.25.10 220 282 1.4E-29 T 22-04-2016 APT61_RS19445 94c4f7df01df20aeba618ccf8e5673de 295 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 291 2.1E-93 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family APT61_RS19445 94c4f7df01df20aeba618ccf8e5673de 295 Gene3D G3DSA:3.40.50.720 1 170 9.0E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS19445 94c4f7df01df20aeba618ccf8e5673de 295 PANTHER PTHR10491:SF4 1 293 3.0E-91 T 22-04-2016 APT61_RS19445 94c4f7df01df20aeba618ccf8e5673de 295 PANTHER PTHR10491 1 293 3.0E-91 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family APT61_RS19445 94c4f7df01df20aeba618ccf8e5673de 295 Pfam PF04321 RmlD substrate binding domain 1 292 3.0E-102 T 22-04-2016 IPR029903 RmlD-like substrate binding domain APT61_RS19445 94c4f7df01df20aeba618ccf8e5673de 295 SUPERFAMILY SSF51735 1 292 1.79E-99 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS08595 37da7ec547e06e9d450ba5a1185a609f 440 Gene3D G3DSA:3.10.350.10 97 139 1.8E-6 T 22-04-2016 IPR018392 LysM domain APT61_RS08595 37da7ec547e06e9d450ba5a1185a609f 440 PANTHER PTHR21666:SF207 1 440 1.2E-268 T 22-04-2016 APT61_RS08595 37da7ec547e06e9d450ba5a1185a609f 440 PANTHER PTHR21666 1 440 1.2E-268 T 22-04-2016 APT61_RS08595 37da7ec547e06e9d450ba5a1185a609f 440 SMART SM00257 97 142 7.5E-5 T 22-04-2016 IPR018392 LysM domain APT61_RS08595 37da7ec547e06e9d450ba5a1185a609f 440 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 5.4E-9 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal APT61_RS08595 37da7ec547e06e9d450ba5a1185a609f 440 Pfam PF04225 Opacity-associated protein A LysM-like domain 96 170 3.1E-6 T 22-04-2016 IPR007340 Opacity-associated protein A APT61_RS08595 37da7ec547e06e9d450ba5a1185a609f 440 Pfam PF01551 Peptidase family M23 313 407 3.1E-33 T 22-04-2016 IPR016047 Peptidase M23 APT61_RS08595 37da7ec547e06e9d450ba5a1185a609f 440 Gene3D G3DSA:2.70.70.10 267 409 3.7E-50 T 22-04-2016 APT61_RS08595 37da7ec547e06e9d450ba5a1185a609f 440 SUPERFAMILY SSF51261 171 408 4.71E-68 T 22-04-2016 IPR011055 Duplicated hybrid motif APT61_RS12590 8632e0f3d190a5df60c4294071a59687 286 PANTHER PTHR10534 1 286 3.8E-140 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APT61_RS12590 8632e0f3d190a5df60c4294071a59687 286 Hamap MF_01639 Pyridoxamine kinase [pdxY]. 1 286 53.809 T 22-04-2016 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APT61_RS12590 8632e0f3d190a5df60c4294071a59687 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 3.8E-138 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APT61_RS12590 8632e0f3d190a5df60c4294071a59687 286 Gene3D G3DSA:3.40.1190.20 1 285 3.5E-87 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS12590 8632e0f3d190a5df60c4294071a59687 286 Pfam PF08543 Phosphomethylpyrimidine kinase 74 257 3.8E-15 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 APT61_RS12590 8632e0f3d190a5df60c4294071a59687 286 SUPERFAMILY SSF53613 1 279 2.18E-75 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS12590 8632e0f3d190a5df60c4294071a59687 286 PANTHER PTHR10534:SF0 1 286 3.8E-140 T 22-04-2016 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 PANTHER PTHR22939 31 62 3.8E-253 T 22-04-2016 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 PANTHER PTHR22939 82 90 3.8E-253 T 22-04-2016 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 PANTHER PTHR22939 107 419 3.8E-253 T 22-04-2016 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 Pfam PF13180 PDZ domain 302 382 3.3E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 398 466 3.1E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 Gene3D G3DSA:2.40.10.10 39 179 4.3E-36 T 22-04-2016 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 Gene3D G3DSA:2.40.10.10 180 292 9.7E-44 T 22-04-2016 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 PANTHER PTHR22939:SF84 31 62 3.8E-253 T 22-04-2016 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 PANTHER PTHR22939:SF84 82 90 3.8E-253 T 22-04-2016 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 PANTHER PTHR22939:SF84 107 419 3.8E-253 T 22-04-2016 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 Gene3D G3DSA:2.30.42.10 409 474 1.1E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 SMART SM00228 291 373 2.4E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 SMART SM00228 396 469 1.1E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 PRINTS PR00834 HtrA/DegQ protease family signature 147 167 1.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 PRINTS PR00834 HtrA/DegQ protease family signature 126 138 1.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 1.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 PRINTS PR00834 HtrA/DegQ protease family signature 188 212 1.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 1.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 PRINTS PR00834 HtrA/DegQ protease family signature 245 262 1.3E-59 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 SUPERFAMILY SSF50494 113 300 1.14E-63 T 22-04-2016 IPR009003 Peptidase S1, PA clan APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 SUPERFAMILY SSF50494 8 60 1.14E-63 T 22-04-2016 IPR009003 Peptidase S1, PA clan APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 SUPERFAMILY SSF50156 273 382 8.79E-22 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 Pfam PF13365 Trypsin-like peptidase domain 116 252 1.1E-32 T 22-04-2016 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 Gene3D G3DSA:2.30.42.10 293 389 7.3E-29 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 SUPERFAMILY SSF50156 403 473 2.89E-16 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS18290 7c7873868b29cf57aabd34415dec8623 477 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 475 2.2E-165 T 22-04-2016 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 APT61_RS11840 2bfa72d1f262d32e8df3b26991c38293 159 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 93 3.3E-17 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS11840 2bfa72d1f262d32e8df3b26991c38293 159 Gene3D G3DSA:1.20.1290.10 2 146 1.1E-48 T 22-04-2016 IPR029032 AhpD-like APT61_RS11840 2bfa72d1f262d32e8df3b26991c38293 159 SUPERFAMILY SSF69118 5 144 8.42E-42 T 22-04-2016 IPR029032 AhpD-like APT61_RS11840 2bfa72d1f262d32e8df3b26991c38293 159 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 78 2.9E-15 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS01640 50c8d562c0a311ab041e1da2663394e9 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 46.988 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APT61_RS01640 50c8d562c0a311ab041e1da2663394e9 477 SUPERFAMILY SSF53756 5 476 4.19E-117 T 22-04-2016 APT61_RS01640 50c8d562c0a311ab041e1da2663394e9 477 Pfam PF08323 Starch synthase catalytic domain 2 233 6.1E-70 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APT61_RS01640 50c8d562c0a311ab041e1da2663394e9 477 PANTHER PTHR12526:SF17 1 477 9.0E-154 T 22-04-2016 APT61_RS01640 50c8d562c0a311ab041e1da2663394e9 477 Gene3D G3DSA:3.40.50.2000 251 457 4.5E-69 T 22-04-2016 APT61_RS01640 50c8d562c0a311ab041e1da2663394e9 477 PANTHER PTHR12526 1 477 9.0E-154 T 22-04-2016 APT61_RS01640 50c8d562c0a311ab041e1da2663394e9 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 476 2.5E-174 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 APT61_RS01640 50c8d562c0a311ab041e1da2663394e9 477 Pfam PF00534 Glycosyl transferases group 1 287 438 2.5E-13 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APT61_RS05585 a466f05cdd36685ea0c28e001acccd3d 82 Gene3D G3DSA:3.30.1320.10 1 79 3.0E-33 T 22-04-2016 IPR023803 Ribosomal protein S16 domain APT61_RS05585 a466f05cdd36685ea0c28e001acccd3d 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.0 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS05585 a466f05cdd36685ea0c28e001acccd3d 82 PANTHER PTHR12919 1 78 3.8E-42 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS05585 a466f05cdd36685ea0c28e001acccd3d 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 2.9E-28 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS05585 a466f05cdd36685ea0c28e001acccd3d 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS05585 a466f05cdd36685ea0c28e001acccd3d 82 SUPERFAMILY SSF54565 1 79 6.28E-29 T 22-04-2016 IPR023803 Ribosomal protein S16 domain APT61_RS05585 a466f05cdd36685ea0c28e001acccd3d 82 Pfam PF00886 Ribosomal protein S16 8 68 3.0E-24 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS19855 3eca1604b60bdb43b72bc4d6ddefc5a4 141 PIRSF PIRSF018193 1 141 1.7E-64 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B APT61_RS19855 3eca1604b60bdb43b72bc4d6ddefc5a4 141 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 31.065 T 22-04-2016 IPR016716 Regulator of ribonuclease activity B APT61_RS19855 3eca1604b60bdb43b72bc4d6ddefc5a4 141 Gene3D G3DSA:3.30.70.970 1 124 5.0E-54 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain APT61_RS19855 3eca1604b60bdb43b72bc4d6ddefc5a4 141 SUPERFAMILY SSF89946 2 122 1.57E-40 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain APT61_RS19855 3eca1604b60bdb43b72bc4d6ddefc5a4 141 Pfam PF06877 Regulator of ribonuclease activity B 12 113 1.3E-33 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain APT61_RS02720 0ff2f3affe16572b642a177962003143 103 PANTHER PTHR21349 1 101 2.0E-45 T 22-04-2016 APT61_RS02720 0ff2f3affe16572b642a177962003143 103 SUPERFAMILY SSF141091 1 102 9.81E-37 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APT61_RS02720 0ff2f3affe16572b642a177962003143 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 7.1E-45 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02720 0ff2f3affe16572b642a177962003143 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 22-04-2016 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02720 0ff2f3affe16572b642a177962003143 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 2.2E-37 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 APT61_RS02720 0ff2f3affe16572b642a177962003143 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.688 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS16100 569ffa452b2402c08aed1fa09c8627c8 408 Gene3D G3DSA:4.10.320.10 114 152 3.0E-18 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APT61_RS16100 569ffa452b2402c08aed1fa09c8627c8 408 SUPERFAMILY SSF47005 107 151 3.4E-10 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APT61_RS16100 569ffa452b2402c08aed1fa09c8627c8 408 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 178 406 1.3E-81 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 APT61_RS16100 569ffa452b2402c08aed1fa09c8627c8 408 PANTHER PTHR23151:SF47 4 408 1.2E-247 T 22-04-2016 APT61_RS16100 569ffa452b2402c08aed1fa09c8627c8 408 SUPERFAMILY SSF51230 2 95 4.45E-25 T 22-04-2016 IPR011053 Single hybrid motif APT61_RS16100 569ffa452b2402c08aed1fa09c8627c8 408 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 408 8.2E-195 T 22-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 APT61_RS16100 569ffa452b2402c08aed1fa09c8627c8 408 Gene3D G3DSA:2.40.50.100 1 96 6.7E-27 T 22-04-2016 APT61_RS16100 569ffa452b2402c08aed1fa09c8627c8 408 Pfam PF02817 e3 binding domain 114 147 1.9E-10 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 APT61_RS16100 569ffa452b2402c08aed1fa09c8627c8 408 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APT61_RS16100 569ffa452b2402c08aed1fa09c8627c8 408 SUPERFAMILY SSF52777 178 407 3.34E-90 T 22-04-2016 APT61_RS16100 569ffa452b2402c08aed1fa09c8627c8 408 Pfam PF00364 Biotin-requiring enzyme 5 76 5.0E-18 T 22-04-2016 IPR000089 Biotin/lipoyl attachment APT61_RS16100 569ffa452b2402c08aed1fa09c8627c8 408 Gene3D G3DSA:3.30.559.10 168 406 4.6E-92 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APT61_RS16100 569ffa452b2402c08aed1fa09c8627c8 408 PANTHER PTHR23151 4 408 1.2E-247 T 22-04-2016 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 SUPERFAMILY SSF51621 171 344 5.93E-87 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 SUPERFAMILY SSF51621 4 79 5.93E-87 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 SUPERFAMILY SSF52935 329 479 5.89E-39 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 1.3E-28 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 6.3E-131 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 Gene3D G3DSA:3.20.20.60 172 331 1.4E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 Gene3D G3DSA:3.20.20.60 6 76 1.4E-93 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 SUPERFAMILY SSF50800 74 168 8.37E-25 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 PANTHER PTHR11817 1 479 0.0 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 3.2E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 3.2E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 3.2E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 3.2E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 3.2E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 3.2E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 3.2E-51 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 PANTHER PTHR11817:SF17 1 479 0.0 T 22-04-2016 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 6.9E-175 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 Gene3D G3DSA:3.40.1380.20 332 480 1.2E-38 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS08605 14760447d06cfefbc094c7ab6b9431df 480 Gene3D G3DSA:2.40.33.10 77 170 7.1E-28 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS05165 d205a1e3120eaea008d531b500402a14 315 Pfam PF00696 Amino acid kinase family 4 297 1.7E-28 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS05165 d205a1e3120eaea008d531b500402a14 315 PIRSF PIRSF000723 1 315 2.4E-129 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APT61_RS05165 d205a1e3120eaea008d531b500402a14 315 PANTHER PTHR30409 1 315 2.3E-141 T 22-04-2016 APT61_RS05165 d205a1e3120eaea008d531b500402a14 315 PRINTS PR01469 Bacterial carbamate kinase signature 77 95 3.8E-60 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APT61_RS05165 d205a1e3120eaea008d531b500402a14 315 PRINTS PR01469 Bacterial carbamate kinase signature 270 285 3.8E-60 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APT61_RS05165 d205a1e3120eaea008d531b500402a14 315 PRINTS PR01469 Bacterial carbamate kinase signature 184 202 3.8E-60 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APT61_RS05165 d205a1e3120eaea008d531b500402a14 315 PRINTS PR01469 Bacterial carbamate kinase signature 111 130 3.8E-60 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APT61_RS05165 d205a1e3120eaea008d531b500402a14 315 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 3.8E-60 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APT61_RS05165 d205a1e3120eaea008d531b500402a14 315 PRINTS PR01469 Bacterial carbamate kinase signature 161 180 3.8E-60 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APT61_RS05165 d205a1e3120eaea008d531b500402a14 315 PRINTS PR01469 Bacterial carbamate kinase signature 215 230 3.8E-60 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 APT61_RS05165 d205a1e3120eaea008d531b500402a14 315 Gene3D G3DSA:3.40.1160.10 1 314 2.7E-99 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS05165 d205a1e3120eaea008d531b500402a14 315 PANTHER PTHR30409:SF1 1 315 2.3E-141 T 22-04-2016 APT61_RS05165 d205a1e3120eaea008d531b500402a14 315 SUPERFAMILY SSF53633 3 313 2.88E-74 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS15970 66981e187e2110e28608fa170ced3497 312 Pfam PF01545 Cation efflux family 19 211 8.0E-48 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APT61_RS15970 66981e187e2110e28608fa170ced3497 312 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 16 290 2.7E-92 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APT61_RS15970 66981e187e2110e28608fa170ced3497 312 Gene3D G3DSA:1.20.1510.10 16 211 2.2E-64 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain APT61_RS15970 66981e187e2110e28608fa170ced3497 312 PANTHER PTHR11562:SF17 3 299 4.1E-111 T 22-04-2016 APT61_RS15970 66981e187e2110e28608fa170ced3497 312 SUPERFAMILY SSF161111 14 212 1.83E-58 T 22-04-2016 APT61_RS15970 66981e187e2110e28608fa170ced3497 312 SUPERFAMILY SSF160240 225 291 7.32E-9 T 22-04-2016 APT61_RS15970 66981e187e2110e28608fa170ced3497 312 PANTHER PTHR11562 3 299 4.1E-111 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APT61_RS16570 e73b312d29e61100d29f5cc2f132e947 500 Pfam PF00005 ABC transporter 21 172 2.4E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS16570 e73b312d29e61100d29f5cc2f132e947 500 Pfam PF00005 ABC transporter 272 426 5.2E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS16570 e73b312d29e61100d29f5cc2f132e947 500 PANTHER PTHR24220:SF308 7 381 7.7E-130 T 22-04-2016 APT61_RS16570 e73b312d29e61100d29f5cc2f132e947 500 SUPERFAMILY SSF52540 267 484 3.2E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16570 e73b312d29e61100d29f5cc2f132e947 500 PANTHER PTHR24220 7 381 7.7E-130 T 22-04-2016 APT61_RS16570 e73b312d29e61100d29f5cc2f132e947 500 SMART SM00382 30 220 3.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS16570 e73b312d29e61100d29f5cc2f132e947 500 SMART SM00382 281 477 8.5E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS16570 e73b312d29e61100d29f5cc2f132e947 500 Gene3D G3DSA:3.40.50.300 5 237 8.1E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16570 e73b312d29e61100d29f5cc2f132e947 500 Gene3D G3DSA:3.40.50.300 261 495 2.5E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16570 e73b312d29e61100d29f5cc2f132e947 500 ProSitePatterns PS00211 ABC transporters family signature. 399 413 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS16570 e73b312d29e61100d29f5cc2f132e947 500 SUPERFAMILY SSF52540 6 232 8.67E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10925 3b9923db8fdb87d6ea408c0c57cdb4fd 297 Gene3D G3DSA:1.20.1560.10 21 292 4.2E-12 T 22-04-2016 APT61_RS10925 3b9923db8fdb87d6ea408c0c57cdb4fd 297 Pfam PF13748 ABC transporter transmembrane region 21 256 9.5E-90 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS10925 3b9923db8fdb87d6ea408c0c57cdb4fd 297 SUPERFAMILY SSF90123 25 292 4.19E-16 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS02250 ae3cd326f24856383ee5becfc0bd8448 82 SUPERFAMILY SSF160272 1 82 1.18E-27 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 APT61_RS02250 ae3cd326f24856383ee5becfc0bd8448 82 Gene3D G3DSA:3.30.160.140 1 82 1.9E-31 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 APT61_RS02250 ae3cd326f24856383ee5becfc0bd8448 82 Pfam PF07369 Protein of unknown function (DUF1488) 5 81 3.7E-23 T 22-04-2016 IPR009962 Protein of unknown function DUF1488 APT61_RS01480 7c8adfd0f62d29d370d8ddfab47c8450 200 Gene3D G3DSA:3.40.50.150 5 194 6.2E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS01480 7c8adfd0f62d29d370d8ddfab47c8450 200 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 189 5.9E-73 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS01480 7c8adfd0f62d29d370d8ddfab47c8450 200 Pfam PF03602 Conserved hypothetical protein 95 12 187 6.6E-64 T 22-04-2016 APT61_RS01480 7c8adfd0f62d29d370d8ddfab47c8450 200 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APT61_RS01480 7c8adfd0f62d29d370d8ddfab47c8450 200 PANTHER PTHR18895:SF60 11 190 5.4E-57 T 22-04-2016 APT61_RS01480 7c8adfd0f62d29d370d8ddfab47c8450 200 PIRSF PIRSF004553 11 191 3.8E-61 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS01480 7c8adfd0f62d29d370d8ddfab47c8450 200 PANTHER PTHR18895 11 190 5.4E-57 T 22-04-2016 APT61_RS01480 7c8adfd0f62d29d370d8ddfab47c8450 200 SUPERFAMILY SSF53335 11 188 2.72E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS10390 8eefe24c8e5c1567eb39d8e682acadda 258 Gene3D G3DSA:3.40.50.720 2 254 4.9E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10390 8eefe24c8e5c1567eb39d8e682acadda 258 PANTHER PTHR24322 157 193 1.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS10390 8eefe24c8e5c1567eb39d8e682acadda 258 PANTHER PTHR24322 12 139 1.2E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS10390 8eefe24c8e5c1567eb39d8e682acadda 258 SUPERFAMILY SSF51735 7 254 3.5E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10390 8eefe24c8e5c1567eb39d8e682acadda 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 252 9.1E-55 T 22-04-2016 APT61_RS10390 8eefe24c8e5c1567eb39d8e682acadda 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.0E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS10390 8eefe24c8e5c1567eb39d8e682acadda 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.0E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS10390 8eefe24c8e5c1567eb39d8e682acadda 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.0E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS10390 8eefe24c8e5c1567eb39d8e682acadda 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.0E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS10390 8eefe24c8e5c1567eb39d8e682acadda 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.0E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS10390 8eefe24c8e5c1567eb39d8e682acadda 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.0E-33 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS10390 8eefe24c8e5c1567eb39d8e682acadda 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS10390 8eefe24c8e5c1567eb39d8e682acadda 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS10390 8eefe24c8e5c1567eb39d8e682acadda 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.2E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11045 244bb99dc69b263d3a07cf9dfccec3e0 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 228 250 4.8E-9 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal APT61_RS11045 244bb99dc69b263d3a07cf9dfccec3e0 255 SUPERFAMILY SSF52540 3 249 5.53E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11045 244bb99dc69b263d3a07cf9dfccec3e0 255 SMART SM00382 28 230 5.4E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS11045 244bb99dc69b263d3a07cf9dfccec3e0 255 PANTHER PTHR24220:SF358 126 255 1.9E-107 T 22-04-2016 APT61_RS11045 244bb99dc69b263d3a07cf9dfccec3e0 255 PANTHER PTHR24220:SF358 5 110 1.9E-107 T 22-04-2016 APT61_RS11045 244bb99dc69b263d3a07cf9dfccec3e0 255 Pfam PF00005 ABC transporter 19 179 5.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS11045 244bb99dc69b263d3a07cf9dfccec3e0 255 PANTHER PTHR24220 126 255 1.9E-107 T 22-04-2016 APT61_RS11045 244bb99dc69b263d3a07cf9dfccec3e0 255 PANTHER PTHR24220 5 110 1.9E-107 T 22-04-2016 APT61_RS11045 244bb99dc69b263d3a07cf9dfccec3e0 255 Gene3D G3DSA:3.40.50.300 3 246 3.7E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18705 95309d5ad8083507469a12738b894238 76 Gene3D G3DSA:2.10.260.10 1 59 3.4E-7 T 22-04-2016 APT61_RS18705 95309d5ad8083507469a12738b894238 76 SUPERFAMILY SSF89447 3 67 8.89E-11 T 22-04-2016 APT61_RS18705 95309d5ad8083507469a12738b894238 76 SMART SM00966 7 48 2.1E-5 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APT61_RS18705 95309d5ad8083507469a12738b894238 76 PANTHER PTHR37550 1 76 1.4E-12 T 22-04-2016 APT61_RS18705 95309d5ad8083507469a12738b894238 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 52 3.0E-10 T 22-04-2016 IPR007159 SpoVT-AbrB domain GO:0003677 APT61_RS18705 95309d5ad8083507469a12738b894238 76 PANTHER PTHR37550:SF3 1 76 1.4E-12 T 22-04-2016 APT61_RS19030 8bad91d63a155fb1c95e85ebf413ae49 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 1.2E-27 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS19030 8bad91d63a155fb1c95e85ebf413ae49 195 SMART SM00852 7 153 1.3E-23 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS19030 8bad91d63a155fb1c95e85ebf413ae49 195 PANTHER PTHR10192 1 193 3.2E-91 T 22-04-2016 APT61_RS19030 8bad91d63a155fb1c95e85ebf413ae49 195 Gene3D G3DSA:3.40.980.10 2 188 1.3E-52 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS19030 8bad91d63a155fb1c95e85ebf413ae49 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 147 3.0E-40 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS19030 8bad91d63a155fb1c95e85ebf413ae49 195 SUPERFAMILY SSF53218 3 188 1.1E-47 T 22-04-2016 IPR001453 MoaB/Mog domain APT61_RS19030 8bad91d63a155fb1c95e85ebf413ae49 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 APT61_RS12690 d6749ecf463748a6e4d203a94f2caef1 267 Pfam PF00877 NlpC/P60 family 149 259 5.2E-31 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS12690 d6749ecf463748a6e4d203a94f2caef1 267 PANTHER PTHR21666 140 261 1.8E-40 T 22-04-2016 APT61_RS12690 d6749ecf463748a6e4d203a94f2caef1 267 Gene3D G3DSA:3.90.1720.10 129 263 9.9E-46 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS12690 d6749ecf463748a6e4d203a94f2caef1 267 SUPERFAMILY SSF54001 132 262 3.19E-41 T 22-04-2016 APT61_RS08855 cc62543d17323e8e3bbf7fcf9c6f96e3 194 PIRSF PIRSF004982 5 190 1.2E-53 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 APT61_RS08855 cc62543d17323e8e3bbf7fcf9c6f96e3 194 PANTHER PTHR37530 1 194 1.9E-65 T 22-04-2016 APT61_RS08855 cc62543d17323e8e3bbf7fcf9c6f96e3 194 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 11 189 1.7E-72 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 APT61_RS08855 cc62543d17323e8e3bbf7fcf9c6f96e3 194 Pfam PF03843 Outer membrane lipoprotein Slp family 20 165 6.5E-50 T 22-04-2016 IPR004658 Outer membrane lipoprotein Slp GO:0019867 APT61_RS12975 3f2caf8f030fc257f213c9abdaa860ed 259 SMART SM00382 29 218 4.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS12975 3f2caf8f030fc257f213c9abdaa860ed 259 PANTHER PTHR24220:SF558 6 255 1.3E-82 T 22-04-2016 APT61_RS12975 3f2caf8f030fc257f213c9abdaa860ed 259 Pfam PF00005 ABC transporter 21 169 3.2E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS12975 3f2caf8f030fc257f213c9abdaa860ed 259 Gene3D G3DSA:3.40.50.300 8 237 6.1E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12975 3f2caf8f030fc257f213c9abdaa860ed 259 SUPERFAMILY SSF52540 6 236 1.38E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12975 3f2caf8f030fc257f213c9abdaa860ed 259 PANTHER PTHR24220 6 255 1.3E-82 T 22-04-2016 APT61_RS12975 3f2caf8f030fc257f213c9abdaa860ed 259 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS04500 12d9be93c1ed0de0dd776510e5115dcf 365 PANTHER PTHR30124:SF0 1 356 1.2E-144 T 22-04-2016 APT61_RS04500 12d9be93c1ed0de0dd776510e5115dcf 365 Gene3D G3DSA:2.40.40.10 166 353 2.4E-46 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APT61_RS04500 12d9be93c1ed0de0dd776510e5115dcf 365 Gene3D G3DSA:2.40.40.10 79 163 7.7E-13 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APT61_RS04500 12d9be93c1ed0de0dd776510e5115dcf 365 PANTHER PTHR30124 1 356 1.2E-144 T 22-04-2016 APT61_RS04500 12d9be93c1ed0de0dd776510e5115dcf 365 Pfam PF03562 MltA specific insert domain 94 257 1.9E-38 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 APT61_RS04500 12d9be93c1ed0de0dd776510e5115dcf 365 PIRSF PIRSF019422 1 365 1.3E-88 T 22-04-2016 IPR026044 Membrane-bound lytic murein transglycosylase A APT61_RS04500 12d9be93c1ed0de0dd776510e5115dcf 365 Pfam PF06725 3D domain 277 354 9.4E-25 T 22-04-2016 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 APT61_RS04500 12d9be93c1ed0de0dd776510e5115dcf 365 SUPERFAMILY SSF50685 25 353 3.07E-113 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APT61_RS04500 12d9be93c1ed0de0dd776510e5115dcf 365 SMART SM00925 125 257 5.8E-67 T 22-04-2016 IPR005300 Lytic transglycosylase MltA GO:0004553 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 351 531 1.3E-69 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 PRINTS PR00701 60kDa inner membrane protein signature 216 234 6.8E-108 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 PRINTS PR00701 60kDa inner membrane protein signature 497 520 6.8E-108 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 PRINTS PR00701 60kDa inner membrane protein signature 322 342 6.8E-108 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 PRINTS PR00701 60kDa inner membrane protein signature 2 23 6.8E-108 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 PRINTS PR00701 60kDa inner membrane protein signature 65 86 6.8E-108 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 PRINTS PR00701 60kDa inner membrane protein signature 250 265 6.8E-108 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 PRINTS PR00701 60kDa inner membrane protein signature 413 436 6.8E-108 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 PRINTS PR00701 60kDa inner membrane protein signature 157 177 6.8E-108 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 PRINTS PR00701 60kDa inner membrane protein signature 460 482 6.8E-108 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 PRINTS PR01900 YidC translocation/secretion protein signature 466 481 1.0E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 PRINTS PR01900 YidC translocation/secretion protein signature 337 353 1.0E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 PRINTS PR01900 YidC translocation/secretion protein signature 486 510 1.0E-29 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 533 26.654 T 22-04-2016 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 PANTHER PTHR12428:SF14 164 545 8.8E-152 T 22-04-2016 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 PANTHER PTHR12428 164 545 8.8E-152 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 Pfam PF02096 60Kd inner membrane protein 352 531 5.0E-61 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 350 2.4E-114 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal APT61_RS22095 4ba5d4fff53a1c2f190dc88b0007726e 546 Pfam PF14849 YidC periplasmic domain 60 341 3.6E-88 T 22-04-2016 IPR028053 Membrane insertase YidC, N-terminal APT61_RS03860 93de3eda7360b42a19d2d48db7755e49 239 SMART SM00345 7 66 3.1E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS03860 93de3eda7360b42a19d2d48db7755e49 239 SUPERFAMILY SSF46785 3 88 2.19E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03860 93de3eda7360b42a19d2d48db7755e49 239 Gene3D G3DSA:3.40.1410.10 62 214 5.1E-29 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APT61_RS03860 93de3eda7360b42a19d2d48db7755e49 239 SMART SM00866 83 221 1.8E-16 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APT61_RS03860 93de3eda7360b42a19d2d48db7755e49 239 PANTHER PTHR11751:SF292 26 68 2.4E-16 T 22-04-2016 APT61_RS03860 93de3eda7360b42a19d2d48db7755e49 239 PANTHER PTHR11751:SF292 111 135 2.4E-16 T 22-04-2016 APT61_RS03860 93de3eda7360b42a19d2d48db7755e49 239 SUPERFAMILY SSF64288 91 228 4.87E-31 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APT61_RS03860 93de3eda7360b42a19d2d48db7755e49 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 2.5E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS03860 93de3eda7360b42a19d2d48db7755e49 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 2.5E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS03860 93de3eda7360b42a19d2d48db7755e49 239 PANTHER PTHR11751 26 68 2.4E-16 T 22-04-2016 APT61_RS03860 93de3eda7360b42a19d2d48db7755e49 239 PANTHER PTHR11751 111 135 2.4E-16 T 22-04-2016 APT61_RS03860 93de3eda7360b42a19d2d48db7755e49 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 64 2.0E-15 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS03860 93de3eda7360b42a19d2d48db7755e49 239 Gene3D G3DSA:1.10.10.10 3 61 1.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03860 93de3eda7360b42a19d2d48db7755e49 239 Pfam PF07702 UTRA domain 87 212 5.3E-24 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APT61_RS05615 db43678d9d56a5536d4db93530c574d2 160 PANTHER PTHR30128 1 157 9.8E-82 T 22-04-2016 APT61_RS05615 db43678d9d56a5536d4db93530c574d2 160 SUPERFAMILY SSF103088 44 157 6.15E-29 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS05615 db43678d9d56a5536d4db93530c574d2 160 Gene3D G3DSA:3.30.1330.60 47 157 1.0E-30 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS05615 db43678d9d56a5536d4db93530c574d2 160 PRINTS PR01021 OMPA domain signature 56 78 8.74E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS05615 db43678d9d56a5536d4db93530c574d2 160 PRINTS PR01021 OMPA domain signature 101 117 8.74E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS05615 db43678d9d56a5536d4db93530c574d2 160 PRINTS PR01021 OMPA domain signature 86 101 8.74E-12 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS05615 db43678d9d56a5536d4db93530c574d2 160 PANTHER PTHR30128:SF12 1 157 9.8E-82 T 22-04-2016 APT61_RS05615 db43678d9d56a5536d4db93530c574d2 160 Pfam PF00691 OmpA family 56 151 1.3E-19 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS11715 74807ef9c6d3ada4d4e4a965466efe57 337 SUPERFAMILY SSF50129 1 170 7.61E-54 T 22-04-2016 IPR011032 GroES-like APT61_RS11715 74807ef9c6d3ada4d4e4a965466efe57 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 129 5.4E-35 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APT61_RS11715 74807ef9c6d3ada4d4e4a965466efe57 337 PANTHER PTHR11695 12 337 1.1E-243 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS11715 74807ef9c6d3ada4d4e4a965466efe57 337 SUPERFAMILY SSF51735 138 305 1.06E-22 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11715 74807ef9c6d3ada4d4e4a965466efe57 337 Pfam PF00107 Zinc-binding dehydrogenase 171 297 7.4E-17 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APT61_RS11715 74807ef9c6d3ada4d4e4a965466efe57 337 Gene3D G3DSA:3.90.180.10 1 166 6.0E-56 T 22-04-2016 IPR011032 GroES-like APT61_RS11715 74807ef9c6d3ada4d4e4a965466efe57 337 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APT61_RS11715 74807ef9c6d3ada4d4e4a965466efe57 337 Gene3D G3DSA:3.40.50.720 167 280 3.3E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11715 74807ef9c6d3ada4d4e4a965466efe57 337 PANTHER PTHR11695:SF554 12 337 1.1E-243 T 22-04-2016 APT61_RS21020 43be2ac907373473bd62d470ee5b83f3 408 PANTHER PTHR11118 16 408 7.5E-205 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 APT61_RS21020 43be2ac907373473bd62d470ee5b83f3 408 ProSitePatterns PS01288 Uncharacterized protein family UPF0027 signature. 33 62 - T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 APT61_RS21020 43be2ac907373473bd62d470ee5b83f3 408 PANTHER PTHR11118:SF3 16 408 7.5E-205 T 22-04-2016 APT61_RS21020 43be2ac907373473bd62d470ee5b83f3 408 Pfam PF01139 tRNA-splicing ligase RtcB 33 408 1.9E-135 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 APT61_RS21020 43be2ac907373473bd62d470ee5b83f3 408 SUPERFAMILY SSF103365 13 408 2.48E-142 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 APT61_RS14365 ebc0c2ed0e854cf73a093dad20f7ae45 502 PANTHER PTHR11819:SF148 4 486 3.6E-190 T 22-04-2016 APT61_RS14365 ebc0c2ed0e854cf73a093dad20f7ae45 502 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APT61_RS14365 ebc0c2ed0e854cf73a093dad20f7ae45 502 Pfam PF00474 Sodium:solute symporter family 35 437 4.9E-142 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS14365 ebc0c2ed0e854cf73a093dad20f7ae45 502 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 3.8E-230 T 22-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 APT61_RS14365 ebc0c2ed0e854cf73a093dad20f7ae45 502 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APT61_RS14365 ebc0c2ed0e854cf73a093dad20f7ae45 502 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 2.4E-128 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS14365 ebc0c2ed0e854cf73a093dad20f7ae45 502 PANTHER PTHR11819 4 486 3.6E-190 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS09705 c20266074f02ed56c4b3934ad1db143f 280 Gene3D G3DSA:1.10.3720.10 4 266 1.1E-65 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09705 c20266074f02ed56c4b3934ad1db143f 280 SUPERFAMILY SSF161098 5 280 3.36E-70 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09705 c20266074f02ed56c4b3934ad1db143f 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 267 1.8E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09705 c20266074f02ed56c4b3934ad1db143f 280 PANTHER PTHR32243:SF18 1 280 3.5E-128 T 22-04-2016 APT61_RS09705 c20266074f02ed56c4b3934ad1db143f 280 PANTHER PTHR32243 1 280 3.5E-128 T 22-04-2016 APT61_RS11505 9e8ececc928d77f8b48fd6bbf28f684e 328 Gene3D G3DSA:3.40.718.10 3 327 5.2E-126 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APT61_RS11505 9e8ececc928d77f8b48fd6bbf28f684e 328 PANTHER PTHR30004:SF6 2 328 2.4E-154 T 22-04-2016 APT61_RS11505 9e8ececc928d77f8b48fd6bbf28f684e 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 322 3.7E-103 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APT61_RS11505 9e8ececc928d77f8b48fd6bbf28f684e 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 1 326 35.265 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APT61_RS11505 9e8ececc928d77f8b48fd6bbf28f684e 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 325 3.8E-111 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APT61_RS11505 9e8ececc928d77f8b48fd6bbf28f684e 328 PANTHER PTHR30004 2 328 2.4E-154 T 22-04-2016 APT61_RS11505 9e8ececc928d77f8b48fd6bbf28f684e 328 SUPERFAMILY SSF53659 4 326 3.2E-106 T 22-04-2016 APT61_RS01185 c21a094a8571d9699ad1ed8ffabd5e6c 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 1.1E-22 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 APT61_RS01185 c21a094a8571d9699ad1ed8ffabd5e6c 320 Pfam PF08279 HTH domain 9 58 9.0E-13 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 APT61_RS01185 c21a094a8571d9699ad1ed8ffabd5e6c 320 Gene3D G3DSA:1.10.10.10 1 63 1.1E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01185 c21a094a8571d9699ad1ed8ffabd5e6c 320 Gene3D G3DSA:2.30.30.100 271 319 3.7E-22 T 22-04-2016 APT61_RS01185 c21a094a8571d9699ad1ed8ffabd5e6c 320 SUPERFAMILY SSF46785 5 60 8.49E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01185 c21a094a8571d9699ad1ed8ffabd5e6c 320 SUPERFAMILY SSF50037 271 317 2.79E-10 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal APT61_RS01185 c21a094a8571d9699ad1ed8ffabd5e6c 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 1.8E-78 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 APT61_RS01185 c21a094a8571d9699ad1ed8ffabd5e6c 320 Gene3D G3DSA:3.30.930.10 75 269 2.7E-58 T 22-04-2016 APT61_RS01185 c21a094a8571d9699ad1ed8ffabd5e6c 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.315 T 22-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 APT61_RS01185 c21a094a8571d9699ad1ed8ffabd5e6c 320 SUPERFAMILY SSF55681 72 268 4.56E-58 T 22-04-2016 APT61_RS01185 c21a094a8571d9699ad1ed8ffabd5e6c 320 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 75 2.1E-27 T 22-04-2016 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 APT61_RS01185 c21a094a8571d9699ad1ed8ffabd5e6c 320 Pfam PF02237 Biotin protein ligase C terminal domain 274 317 8.8E-9 T 22-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 APT61_RS01185 c21a094a8571d9699ad1ed8ffabd5e6c 320 PANTHER PTHR12835 8 317 1.8E-91 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 APT61_RS11145 82332447956bbd49fa5c313b2b617511 283 SUPERFAMILY SSF161098 81 268 4.71E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS11145 82332447956bbd49fa5c313b2b617511 283 Gene3D G3DSA:1.10.3720.10 78 278 4.0E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS11145 82332447956bbd49fa5c313b2b617511 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 276 3.0E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS11145 82332447956bbd49fa5c313b2b617511 283 PANTHER PTHR30465 4 275 1.4E-77 T 22-04-2016 APT61_RS11145 82332447956bbd49fa5c313b2b617511 283 PANTHER PTHR30465:SF10 4 275 1.4E-77 T 22-04-2016 APT61_RS20320 496f0de54cb83eba7cc5df0664f3999b 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 216.862 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APT61_RS20320 496f0de54cb83eba7cc5df0664f3999b 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 2.0E-206 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APT61_RS20320 496f0de54cb83eba7cc5df0664f3999b 432 Gene3D G3DSA:3.90.170.10 267 426 8.8E-67 T 22-04-2016 APT61_RS20320 496f0de54cb83eba7cc5df0664f3999b 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APT61_RS20320 496f0de54cb83eba7cc5df0664f3999b 432 SMART SM00788 4 425 1.7E-300 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APT61_RS20320 496f0de54cb83eba7cc5df0664f3999b 432 SUPERFAMILY SSF52540 3 431 4.57E-180 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20320 496f0de54cb83eba7cc5df0664f3999b 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 1.6E-175 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APT61_RS20320 496f0de54cb83eba7cc5df0664f3999b 432 PANTHER PTHR11846 1 429 1.4E-262 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 APT61_RS20320 496f0de54cb83eba7cc5df0664f3999b 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 APT61_RS20320 496f0de54cb83eba7cc5df0664f3999b 432 Gene3D G3DSA:3.40.440.10 196 266 1.6E-70 T 22-04-2016 APT61_RS20320 496f0de54cb83eba7cc5df0664f3999b 432 Gene3D G3DSA:3.40.440.10 4 94 1.6E-70 T 22-04-2016 APT61_RS20320 496f0de54cb83eba7cc5df0664f3999b 432 Gene3D G3DSA:1.10.300.10 103 195 3.5E-37 T 22-04-2016 APT61_RS15615 3530e8f735e293f556d37d2f62963a05 523 PANTHER PTHR23501 11 511 3.9E-156 T 22-04-2016 APT61_RS15615 3530e8f735e293f556d37d2f62963a05 523 Gene3D G3DSA:1.20.1250.20 20 202 1.8E-36 T 22-04-2016 APT61_RS15615 3530e8f735e293f556d37d2f62963a05 523 Gene3D G3DSA:1.20.1250.20 493 514 9.3E-18 T 22-04-2016 APT61_RS15615 3530e8f735e293f556d37d2f62963a05 523 Gene3D G3DSA:1.20.1250.20 272 433 9.3E-18 T 22-04-2016 APT61_RS15615 3530e8f735e293f556d37d2f62963a05 523 Pfam PF07690 Major Facilitator Superfamily 23 418 6.1E-50 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS15615 3530e8f735e293f556d37d2f62963a05 523 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 502 1.2E-130 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APT61_RS15615 3530e8f735e293f556d37d2f62963a05 523 PANTHER PTHR23501:SF69 11 511 3.9E-156 T 22-04-2016 APT61_RS15615 3530e8f735e293f556d37d2f62963a05 523 SUPERFAMILY SSF103473 257 428 1.1E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS15615 3530e8f735e293f556d37d2f62963a05 523 SUPERFAMILY SSF103473 6 201 1.1E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS15615 3530e8f735e293f556d37d2f62963a05 523 SUPERFAMILY SSF103473 488 513 1.1E-66 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS17900 9c87841a619ba557df81e852611f9efb 225 PIRSF PIRSF000440 5 219 8.9E-82 T 22-04-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 APT61_RS17900 9c87841a619ba557df81e852611f9efb 225 Pfam PF00302 Chloramphenicol acetyltransferase 8 210 3.2E-91 T 22-04-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 APT61_RS17900 9c87841a619ba557df81e852611f9efb 225 PANTHER PTHR38474 16 223 3.4E-65 T 22-04-2016 APT61_RS17900 9c87841a619ba557df81e852611f9efb 225 Gene3D G3DSA:3.30.559.10 8 214 3.8E-84 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain APT61_RS17900 9c87841a619ba557df81e852611f9efb 225 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 13 209 2.0E-72 T 22-04-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 APT61_RS17900 9c87841a619ba557df81e852611f9efb 225 PANTHER PTHR38474:SF2 16 223 3.4E-65 T 22-04-2016 APT61_RS17900 9c87841a619ba557df81e852611f9efb 225 SMART SM01059 6 210 4.1E-112 T 22-04-2016 IPR001707 Chloramphenicol acetyltransferase GO:0008811 APT61_RS17900 9c87841a619ba557df81e852611f9efb 225 ProSitePatterns PS00100 Chloramphenicol acetyltransferase active site. 191 201 - T 22-04-2016 IPR018372 Chloramphenicol acetyltransferase, active site GO:0008811 APT61_RS17900 9c87841a619ba557df81e852611f9efb 225 SUPERFAMILY SSF52777 7 216 2.38E-73 T 22-04-2016 APT61_RS15385 4cc1d3127160631262e76522b0070510 342 PANTHER PTHR10578 26 224 6.2E-104 T 22-04-2016 APT61_RS15385 4cc1d3127160631262e76522b0070510 342 PANTHER PTHR10578 246 339 6.2E-104 T 22-04-2016 APT61_RS15385 4cc1d3127160631262e76522b0070510 342 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 4 342 38.188 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APT61_RS15385 4cc1d3127160631262e76522b0070510 342 SMART SM01240 36 342 0.0055 T 22-04-2016 APT61_RS15385 4cc1d3127160631262e76522b0070510 342 PIRSF PIRSF003314 1 342 7.0E-119 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APT61_RS15385 4cc1d3127160631262e76522b0070510 342 SUPERFAMILY SSF51395 27 339 6.92E-73 T 22-04-2016 APT61_RS15385 4cc1d3127160631262e76522b0070510 342 Pfam PF01070 FMN-dependent dehydrogenase 5 97 6.5E-7 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 APT61_RS15385 4cc1d3127160631262e76522b0070510 342 Pfam PF01070 FMN-dependent dehydrogenase 176 336 1.7E-11 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 APT61_RS15385 4cc1d3127160631262e76522b0070510 342 PANTHER PTHR10578:SF3 26 224 6.2E-104 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APT61_RS15385 4cc1d3127160631262e76522b0070510 342 PANTHER PTHR10578:SF3 246 339 6.2E-104 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APT61_RS15385 4cc1d3127160631262e76522b0070510 342 Gene3D G3DSA:3.20.20.70 25 339 3.0E-113 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS15385 4cc1d3127160631262e76522b0070510 342 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 6 340 3.8E-113 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 APT61_RS05885 402a01be7659d121a3a4f3b53fc70a52 140 PANTHER PTHR33452 4 140 1.5E-63 T 22-04-2016 APT61_RS05885 402a01be7659d121a3a4f3b53fc70a52 140 PANTHER PTHR33452:SF6 4 140 1.5E-63 T 22-04-2016 APT61_RS05885 402a01be7659d121a3a4f3b53fc70a52 140 Pfam PF07681 DoxX 17 97 2.4E-17 T 22-04-2016 IPR032808 DoxX family APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 417 439 1.5E-9 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 1.5E-9 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 1.5E-9 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 1.5E-9 T 22-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 PANTHER PTHR22773 1 567 5.3E-243 T 22-04-2016 APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 PANTHER PTHR22773:SF50 1 567 5.3E-243 T 22-04-2016 APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 9.5E-55 T 22-04-2016 APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 9.5E-55 T 22-04-2016 APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 9.5E-55 T 22-04-2016 APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 9.5E-55 T 22-04-2016 APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 9.5E-55 T 22-04-2016 APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 9.5E-55 T 22-04-2016 APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 9.5E-55 T 22-04-2016 APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 3.4E-23 T 22-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 610 2.7E-235 T 22-04-2016 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 APT61_RS06880 b641044d5eec2d555c4e734db75a322b 613 Pfam PF00361 Proton-conducting membrane transporter 133 425 2.5E-98 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 Gene3D G3DSA:3.30.1490.20 8 197 4.1E-68 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 Gene3D G3DSA:3.30.470.20 199 356 1.2E-61 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 348 1.6E-121 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 9 792 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 PIRSF PIRSF000854 4 792 0.0 T 22-04-2016 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|UniPathway: UPA00138 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 483 789 2.0E-59 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 416 427 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 PANTHER PTHR22931 2 271 0.0 T 22-04-2016 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 PANTHER PTHR22931 287 792 0.0 T 22-04-2016 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 SUPERFAMILY SSF51621 468 791 1.23E-95 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 Gene3D G3DSA:3.20.20.60 484 790 1.5E-103 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 PANTHER PTHR22931:SF7 2 271 0.0 T 22-04-2016 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 PANTHER PTHR22931:SF7 287 792 0.0 T 22-04-2016 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 696 714 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 SUPERFAMILY SSF52009 350 468 2.09E-35 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 386 457 8.7E-27 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 SUPERFAMILY SSF56059 7 387 9.54E-110 T 22-04-2016 APT61_RS12935 a0f7f6742949ea462e6b5313e96f203f 792 Gene3D G3DSA:3.50.30.10 376 472 4.1E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APT61_RS12900 d17940508095e5cada4eeb7344e0d1fb 248 SMART SM00382 26 223 7.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS12900 d17940508095e5cada4eeb7344e0d1fb 248 SUPERFAMILY SSF52540 2 231 7.74E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12900 d17940508095e5cada4eeb7344e0d1fb 248 PANTHER PTHR24220:SF85 3 248 5.6E-127 T 22-04-2016 APT61_RS12900 d17940508095e5cada4eeb7344e0d1fb 248 Pfam PF00005 ABC transporter 17 172 8.4E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS12900 d17940508095e5cada4eeb7344e0d1fb 248 Gene3D G3DSA:3.40.50.300 1 236 3.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12900 d17940508095e5cada4eeb7344e0d1fb 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 3.7E-114 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 APT61_RS12900 d17940508095e5cada4eeb7344e0d1fb 248 PANTHER PTHR24220 3 248 5.6E-127 T 22-04-2016 APT61_RS12900 d17940508095e5cada4eeb7344e0d1fb 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS03265 7a24b0eea22656e18923ec44eb775b4c 284 TIGRFAM TIGR00571 dam: DNA adenine methylase 1 258 2.1E-87 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APT61_RS03265 7a24b0eea22656e18923ec44eb775b4c 284 PANTHER PTHR30481:SF3 1 275 1.5E-105 T 22-04-2016 APT61_RS03265 7a24b0eea22656e18923ec44eb775b4c 284 Gene3D G3DSA:3.40.50.150 1 56 1.2E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS03265 7a24b0eea22656e18923ec44eb775b4c 284 Gene3D G3DSA:3.40.50.150 157 259 1.2E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS03265 7a24b0eea22656e18923ec44eb775b4c 284 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 175 181 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APT61_RS03265 7a24b0eea22656e18923ec44eb775b4c 284 SUPERFAMILY SSF53335 2 258 1.11E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS03265 7a24b0eea22656e18923ec44eb775b4c 284 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 7 243 1.9E-62 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APT61_RS03265 7a24b0eea22656e18923ec44eb775b4c 284 PIRSF PIRSF000398 1 264 4.4E-61 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 APT61_RS03265 7a24b0eea22656e18923ec44eb775b4c 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 7 23 2.2E-16 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APT61_RS03265 7a24b0eea22656e18923ec44eb775b4c 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 28 42 2.2E-16 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APT61_RS03265 7a24b0eea22656e18923ec44eb775b4c 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 47 60 2.2E-16 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APT61_RS03265 7a24b0eea22656e18923ec44eb775b4c 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 172 184 2.2E-16 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 APT61_RS03265 7a24b0eea22656e18923ec44eb775b4c 284 Gene3D G3DSA:1.10.1020.10 57 153 4.0E-33 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 APT61_RS03265 7a24b0eea22656e18923ec44eb775b4c 284 PANTHER PTHR30481 1 275 1.5E-105 T 22-04-2016 APT61_RS19950 95acf746aba568041d17b1663ce30269 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 2.5E-207 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 APT61_RS19950 95acf746aba568041d17b1663ce30269 712 SUPERFAMILY SSF51998 121 687 1.28E-196 T 22-04-2016 APT61_RS19950 95acf746aba568041d17b1663ce30269 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 1.9E-181 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 APT61_RS19950 95acf746aba568041d17b1663ce30269 712 Pfam PF03477 ATP cone domain 4 89 7.2E-20 T 22-04-2016 IPR005144 ATP-cone domain APT61_RS19950 95acf746aba568041d17b1663ce30269 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APT61_RS19950 95acf746aba568041d17b1663ce30269 712 Gene3D G3DSA:3.20.70.20 124 685 8.1E-186 T 22-04-2016 APT61_RS19950 95acf746aba568041d17b1663ce30269 712 PANTHER PTHR21075 1 711 0.0 T 22-04-2016 APT61_RS04125 9a2a4577fe9152dfe6e099b36bfd856f 400 PANTHER PTHR13789:SF5 2 400 1.4E-186 T 22-04-2016 APT61_RS04125 9a2a4577fe9152dfe6e099b36bfd856f 400 Pfam PF01494 FAD binding domain 4 345 4.0E-31 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 APT61_RS04125 9a2a4577fe9152dfe6e099b36bfd856f 400 SUPERFAMILY SSF51905 4 177 3.17E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS04125 9a2a4577fe9152dfe6e099b36bfd856f 400 SUPERFAMILY SSF51905 268 385 3.17E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS04125 9a2a4577fe9152dfe6e099b36bfd856f 400 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 8.3E-135 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 APT61_RS04125 9a2a4577fe9152dfe6e099b36bfd856f 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 5.3E-20 T 22-04-2016 APT61_RS04125 9a2a4577fe9152dfe6e099b36bfd856f 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 5.3E-20 T 22-04-2016 APT61_RS04125 9a2a4577fe9152dfe6e099b36bfd856f 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 5.3E-20 T 22-04-2016 APT61_RS04125 9a2a4577fe9152dfe6e099b36bfd856f 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 5.3E-20 T 22-04-2016 APT61_RS04125 9a2a4577fe9152dfe6e099b36bfd856f 400 Gene3D G3DSA:3.50.50.60 3 182 6.3E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS04125 9a2a4577fe9152dfe6e099b36bfd856f 400 Gene3D G3DSA:3.50.50.60 269 357 6.3E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS04125 9a2a4577fe9152dfe6e099b36bfd856f 400 PANTHER PTHR13789 2 400 1.4E-186 T 22-04-2016 APT61_RS04125 9a2a4577fe9152dfe6e099b36bfd856f 400 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 APT61_RS08835 63ba8046ef701774a50eda404a426c90 61 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 19.348 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 APT61_RS08835 63ba8046ef701774a50eda404a426c90 61 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 2.5E-27 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 APT61_RS08835 63ba8046ef701774a50eda404a426c90 61 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 6.0E-18 T 22-04-2016 IPR005371 Uncharacterised protein family UPF0181 APT61_RS20025 588c2c369f896405d389a935a65b6369 183 SUPERFAMILY SSF158710 37 180 8.24E-52 T 22-04-2016 APT61_RS20025 588c2c369f896405d389a935a65b6369 183 PIRSF PIRSF016183 10 183 3.4E-72 T 22-04-2016 IPR006839 Ribosome-associated, YjgA APT61_RS20025 588c2c369f896405d389a935a65b6369 183 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 16 180 24.114 T 22-04-2016 IPR006839 Ribosome-associated, YjgA APT61_RS20025 588c2c369f896405d389a935a65b6369 183 Pfam PF04751 Protein of unknown function (DUF615) 26 176 3.6E-56 T 22-04-2016 IPR006839 Ribosome-associated, YjgA APT61_RS20025 588c2c369f896405d389a935a65b6369 183 Gene3D G3DSA:1.10.60.30 111 182 2.9E-32 T 22-04-2016 IPR023153 PSPTO4464-like domain APT61_RS20025 588c2c369f896405d389a935a65b6369 183 PANTHER PTHR38101:SF1 4 183 1.0E-86 T 22-04-2016 APT61_RS20025 588c2c369f896405d389a935a65b6369 183 PANTHER PTHR38101 4 183 1.0E-86 T 22-04-2016 APT61_RS20025 588c2c369f896405d389a935a65b6369 183 Gene3D G3DSA:1.10.60.30 36 110 3.0E-30 T 22-04-2016 IPR023153 PSPTO4464-like domain APT61_RS09385 782a90aad34c3c6fe38b01be62e29351 204 Pfam PF00265 Thymidine kinase 2 186 1.0E-64 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APT61_RS09385 782a90aad34c3c6fe38b01be62e29351 204 PANTHER PTHR11441 1 198 2.4E-82 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APT61_RS09385 782a90aad34c3c6fe38b01be62e29351 204 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.166 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APT61_RS09385 782a90aad34c3c6fe38b01be62e29351 204 SUPERFAMILY SSF52540 1 141 1.41E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09385 782a90aad34c3c6fe38b01be62e29351 204 SUPERFAMILY SSF57716 142 189 8.55E-17 T 22-04-2016 APT61_RS09385 782a90aad34c3c6fe38b01be62e29351 204 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 22-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APT61_RS09385 782a90aad34c3c6fe38b01be62e29351 204 Gene3D G3DSA:3.30.60.20 142 189 4.7E-20 T 22-04-2016 APT61_RS09385 782a90aad34c3c6fe38b01be62e29351 204 PIRSF PIRSF035805 1 195 2.3E-55 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 APT61_RS10425 6bb3aeaf4ff19f3d75474fe7f73a5227 129 SUPERFAMILY SSF54427 3 128 5.43E-35 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS10425 6bb3aeaf4ff19f3d75474fe7f73a5227 129 PIRSF PIRSF029394 1 129 7.5E-39 T 22-04-2016 IPR016918 Uncharacterised conserved protein UCP029394 APT61_RS10425 6bb3aeaf4ff19f3d75474fe7f73a5227 129 Gene3D G3DSA:3.10.450.50 1 128 5.2E-42 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS07120 874f27cf18c532ee7a576128425886a9 114 Pfam PF13989 YejG-like protein 4 108 1.7E-47 T 22-04-2016 IPR020489 Uncharacterised protein family YejG APT61_RS07120 874f27cf18c532ee7a576128425886a9 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 113 8.0E-46 T 22-04-2016 IPR020489 Uncharacterised protein family YejG APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 SUPERFAMILY SSF53335 258 373 3.02E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.742 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 Gene3D G3DSA:3.40.50.150 432 700 4.3E-73 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 1.8E-65 T 22-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 SUPERFAMILY SSF53335 140 217 3.02E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 SMART SM00981 56 154 3.5E-20 T 22-04-2016 IPR004114 THUMP domain GO:0003723 APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 3.0E-5 T 22-04-2016 APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 303 315 3.0E-5 T 22-04-2016 APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 SUPERFAMILY SSF53335 396 698 3.74E-68 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 PANTHER PTHR18895:SF62 401 681 3.9E-131 T 22-04-2016 APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 476 658 1.7E-20 T 22-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 PANTHER PTHR18895 401 681 3.9E-131 T 22-04-2016 APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 PIRSF PIRSF037618 1 702 1.8E-299 T 22-04-2016 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 Pfam PF02926 THUMP domain 21 153 8.3E-19 T 22-04-2016 IPR004114 THUMP domain GO:0003723 APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 Gene3D G3DSA:3.40.50.150 148 214 1.8E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS14810 fe8d4cd209a6498fd3742c3d2d13d4c0 702 Gene3D G3DSA:3.40.50.150 255 336 1.8E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS21700 56e4c3b99284bde44032b1714f619e5f 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT61_RS21700 56e4c3b99284bde44032b1714f619e5f 198 SUPERFAMILY SSF46689 5 86 4.39E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS21700 56e4c3b99284bde44032b1714f619e5f 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 41.035 T 22-04-2016 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 APT61_RS21700 56e4c3b99284bde44032b1714f619e5f 198 PANTHER PTHR30055 1 193 8.0E-118 T 22-04-2016 APT61_RS21700 56e4c3b99284bde44032b1714f619e5f 198 SUPERFAMILY SSF48498 84 192 1.82E-6 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS21700 56e4c3b99284bde44032b1714f619e5f 198 PANTHER PTHR30055:SF58 1 193 8.0E-118 T 22-04-2016 APT61_RS21700 56e4c3b99284bde44032b1714f619e5f 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 61 4.8E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS21700 56e4c3b99284bde44032b1714f619e5f 198 Gene3D G3DSA:1.10.357.10 7 188 7.1E-34 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS15435 3c9605c88dedf7de8c01fb91783b7ae7 202 SMART SM00014 61 169 1.3E-24 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS15435 3c9605c88dedf7de8c01fb91783b7ae7 202 PANTHER PTHR14969 3 197 1.8E-70 T 22-04-2016 APT61_RS15435 3c9605c88dedf7de8c01fb91783b7ae7 202 PANTHER PTHR14969:SF20 3 197 1.8E-70 T 22-04-2016 APT61_RS15435 3c9605c88dedf7de8c01fb91783b7ae7 202 SUPERFAMILY SSF48317 2 200 3.53E-38 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS15435 3c9605c88dedf7de8c01fb91783b7ae7 202 Gene3D G3DSA:1.20.144.10 3 165 8.9E-26 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS15435 3c9605c88dedf7de8c01fb91783b7ae7 202 Pfam PF01569 PAP2 superfamily 63 164 9.0E-14 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS10295 ff6e2d24b3f97a74d14d0e188c263ba7 381 SUPERFAMILY SSF51395 3 328 1.49E-75 T 22-04-2016 APT61_RS10295 ff6e2d24b3f97a74d14d0e188c263ba7 381 PANTHER PTHR22893 6 326 5.0E-76 T 22-04-2016 APT61_RS10295 ff6e2d24b3f97a74d14d0e188c263ba7 381 PANTHER PTHR22893:SF48 6 326 5.0E-76 T 22-04-2016 APT61_RS10295 ff6e2d24b3f97a74d14d0e188c263ba7 381 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 323 4.7E-55 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 APT61_RS10295 ff6e2d24b3f97a74d14d0e188c263ba7 381 Gene3D G3DSA:3.20.20.70 3 330 4.0E-76 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS11455 bad8fd2586488093ad2b7f3b6f83f717 327 SMART SM00267 154 323 1.7E-27 T 22-04-2016 IPR000160 GGDEF domain APT61_RS11455 bad8fd2586488093ad2b7f3b6f83f717 327 SUPERFAMILY SSF55073 169 317 1.41E-38 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS11455 bad8fd2586488093ad2b7f3b6f83f717 327 Gene3D G3DSA:3.30.70.270 166 317 1.8E-39 T 22-04-2016 APT61_RS11455 bad8fd2586488093ad2b7f3b6f83f717 327 Gene3D G3DSA:3.30.450.40 28 155 1.7E-14 T 22-04-2016 IPR029016 GAF domain-like APT61_RS11455 bad8fd2586488093ad2b7f3b6f83f717 327 PANTHER PTHR33121 7 159 6.7E-30 T 22-04-2016 APT61_RS11455 bad8fd2586488093ad2b7f3b6f83f717 327 Pfam PF01590 GAF domain 32 157 3.8E-11 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS11455 bad8fd2586488093ad2b7f3b6f83f717 327 Pfam PF00990 Diguanylate cyclase, GGDEF domain 165 317 1.7E-35 T 22-04-2016 IPR000160 GGDEF domain APT61_RS11455 bad8fd2586488093ad2b7f3b6f83f717 327 SMART SM00065 26 168 5.8E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS11455 bad8fd2586488093ad2b7f3b6f83f717 327 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 164 316 1.0E-36 T 22-04-2016 IPR000160 GGDEF domain APT61_RS11455 bad8fd2586488093ad2b7f3b6f83f717 327 PANTHER PTHR33121:SF12 7 159 6.7E-30 T 22-04-2016 APT61_RS11455 bad8fd2586488093ad2b7f3b6f83f717 327 SUPERFAMILY SSF55781 31 155 1.52E-22 T 22-04-2016 IPR029016 GAF domain-like APT61_RS17860 99cc94a249e66eea13aac79c44b515fa 312 Pfam PF13478 XdhC Rossmann domain 181 302 2.0E-20 T 22-04-2016 IPR027051 XdhC Rossmann domain APT61_RS17860 99cc94a249e66eea13aac79c44b515fa 312 Pfam PF02625 XdhC and CoxI family 38 102 1.0E-16 T 22-04-2016 IPR003777 XdhC- CoxI APT61_RS17860 99cc94a249e66eea13aac79c44b515fa 312 PANTHER PTHR30388 25 306 6.6E-74 T 22-04-2016 APT61_RS17860 99cc94a249e66eea13aac79c44b515fa 312 PANTHER PTHR30388:SF4 25 306 6.6E-74 T 22-04-2016 APT61_RS17725 ed856ca63de6056fb483dc6f868fab6f 458 Gene3D G3DSA:1.20.1250.20 17 204 6.0E-15 T 22-04-2016 APT61_RS17725 ed856ca63de6056fb483dc6f868fab6f 458 Gene3D G3DSA:1.20.1250.20 231 429 1.9E-9 T 22-04-2016 APT61_RS17725 ed856ca63de6056fb483dc6f868fab6f 458 SUPERFAMILY SSF103473 9 428 1.09E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS17725 ed856ca63de6056fb483dc6f868fab6f 458 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 12 441 3.1E-121 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 APT61_RS17725 ed856ca63de6056fb483dc6f868fab6f 458 PANTHER PTHR11328 9 453 1.3E-92 T 22-04-2016 APT61_RS17725 ed856ca63de6056fb483dc6f868fab6f 458 Pfam PF13347 MFS/sugar transport protein 14 431 7.9E-96 T 22-04-2016 APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 Gene3D G3DSA:1.20.200.10 108 374 8.3E-104 T 22-04-2016 APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 2.7E-68 T 22-04-2016 APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 2.7E-68 T 22-04-2016 APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 2.7E-68 T 22-04-2016 APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 2.7E-68 T 22-04-2016 APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 2.7E-68 T 22-04-2016 APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 2.7E-68 T 22-04-2016 APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 PANTHER PTHR11444:SF3 3 456 7.2E-242 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.451 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 Gene3D G3DSA:1.10.275.10 1 107 4.2E-37 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 PANTHER PTHR11444 3 456 7.2E-242 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 Pfam PF00206 Lyase 6 301 3.6E-98 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 5.2E-212 T 22-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 2.1E-22 T 22-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.1E-28 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.1E-28 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.1E-28 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.1E-28 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 Gene3D G3DSA:1.10.40.30 375 432 3.4E-29 T 22-04-2016 APT61_RS00685 d112ad84b54157202fa9b7baed3058f1 457 SUPERFAMILY SSF48557 3 456 8.8E-141 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 APT61_RS13655 b35440761e87c808c972c8885954a10e 162 Pfam PF07278 Protein of unknown function (DUF1441) 9 150 4.8E-52 T 22-04-2016 IPR009901 Bacteriophage VT1-Sakai, H0025 APT61_RS01865 8a5be4ba117ca2d3fa86fe6d54683b84 394 Gene3D G3DSA:1.20.1250.20 6 181 1.1E-15 T 22-04-2016 APT61_RS01865 8a5be4ba117ca2d3fa86fe6d54683b84 394 PANTHER PTHR23514 1 388 2.7E-94 T 22-04-2016 APT61_RS01865 8a5be4ba117ca2d3fa86fe6d54683b84 394 Pfam PF07690 Major Facilitator Superfamily 14 317 1.7E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS01865 8a5be4ba117ca2d3fa86fe6d54683b84 394 Gene3D G3DSA:1.20.1250.20 208 380 1.9E-10 T 22-04-2016 APT61_RS01865 8a5be4ba117ca2d3fa86fe6d54683b84 394 PANTHER PTHR23514:SF3 1 388 2.7E-94 T 22-04-2016 APT61_RS01865 8a5be4ba117ca2d3fa86fe6d54683b84 394 Hamap MF_01044 Protein TsgA [tsgA]. 1 388 29.644 T 22-04-2016 IPR023528 Major facilitator superfamily transporter, TsgA APT61_RS01865 8a5be4ba117ca2d3fa86fe6d54683b84 394 SUPERFAMILY SSF103473 4 386 1.44E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11420 d5a7636439fd410cba0603893777d0da 396 PANTHER PTHR13833:SF51 38 393 1.7E-42 T 22-04-2016 APT61_RS11420 d5a7636439fd410cba0603893777d0da 396 PANTHER PTHR13833 38 393 1.7E-42 T 22-04-2016 APT61_RS11420 d5a7636439fd410cba0603893777d0da 396 Pfam PF00578 AhpC/TSA family 264 372 3.1E-14 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS11420 d5a7636439fd410cba0603893777d0da 396 SUPERFAMILY SSF52833 250 390 7.42E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS11420 d5a7636439fd410cba0603893777d0da 396 Gene3D G3DSA:3.40.30.10 253 395 7.9E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS11420 d5a7636439fd410cba0603893777d0da 396 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 6 201 3.4E-15 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 APT61_RS16530 82007f66c4805130dc6fdff926688aed 204 SUPERFAMILY SSF53639 8 202 1.67E-43 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS16530 82007f66c4805130dc6fdff926688aed 204 SMART SM01007 8 196 1.3E-46 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS16530 82007f66c4805130dc6fdff926688aed 204 PANTHER PTHR10640 21 201 2.4E-43 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 APT61_RS16530 82007f66c4805130dc6fdff926688aed 204 Gene3D G3DSA:3.40.225.10 9 202 6.3E-49 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS16530 82007f66c4805130dc6fdff926688aed 204 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 194 1.1E-40 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS16530 82007f66c4805130dc6fdff926688aed 204 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 204 119.979 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 APT61_RS16530 82007f66c4805130dc6fdff926688aed 204 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 10 201 1.1E-65 T 22-04-2016 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|KEGG: 00400+4.2.1.10|MetaCyc: PWY-4361|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00904 APT61_RS22205 f8bc1579253972c2bfd4f3f917b38ab1 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.516 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22205 f8bc1579253972c2bfd4f3f917b38ab1 287 Gene3D G3DSA:3.40.1380.10 63 191 9.6E-44 T 22-04-2016 APT61_RS22205 f8bc1579253972c2bfd4f3f917b38ab1 287 PANTHER PTHR11693 1 287 1.7E-135 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22205 f8bc1579253972c2bfd4f3f917b38ab1 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 22-04-2016 IPR023632 ATPase, F1 complex, gamma subunit conserved site APT61_RS22205 f8bc1579253972c2bfd4f3f917b38ab1 287 Gene3D G3DSA:1.10.287.80 236 282 3.7E-30 T 22-04-2016 APT61_RS22205 f8bc1579253972c2bfd4f3f917b38ab1 287 Pfam PF00231 ATP synthase 5 286 4.7E-91 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22205 f8bc1579253972c2bfd4f3f917b38ab1 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 2.6E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22205 f8bc1579253972c2bfd4f3f917b38ab1 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.6E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22205 f8bc1579253972c2bfd4f3f917b38ab1 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 2.6E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22205 f8bc1579253972c2bfd4f3f917b38ab1 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 2.6E-37 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22205 f8bc1579253972c2bfd4f3f917b38ab1 287 SUPERFAMILY SSF52943 2 287 1.57E-96 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain APT61_RS22205 f8bc1579253972c2bfd4f3f917b38ab1 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 9.3E-112 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 APT61_RS22205 f8bc1579253972c2bfd4f3f917b38ab1 287 Gene3D G3DSA:1.10.287.80 202 235 2.4E-39 T 22-04-2016 APT61_RS22205 f8bc1579253972c2bfd4f3f917b38ab1 287 Gene3D G3DSA:1.10.287.80 19 60 2.4E-39 T 22-04-2016 APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 PANTHER PTHR19211 40 256 4.6E-128 T 22-04-2016 APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 PANTHER PTHR19211 283 535 4.6E-128 T 22-04-2016 APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 SUPERFAMILY SSF52540 24 226 1.27E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 Gene3D G3DSA:3.40.50.300 380 407 1.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 SMART SM00382 366 533 5.1E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 SMART SM00382 34 219 9.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 Pfam PF00005 ABC transporter 36 175 1.4E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 Pfam PF00005 ABC transporter 368 487 8.8E-16 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 Gene3D G3DSA:3.40.50.300 12 261 1.5E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 Gene3D G3DSA:3.40.50.300 408 521 4.1E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 SUPERFAMILY SSF52540 361 519 3.3E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 Gene3D G3DSA:3.40.50.300 361 379 7.3E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 PANTHER PTHR19211:SF6 40 256 4.6E-128 T 22-04-2016 APT61_RS21375 afa2786865d34eebee1f9ccaa95645ec 539 PANTHER PTHR19211:SF6 283 535 4.6E-128 T 22-04-2016 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 PANTHER PTHR34501:SF5 2 350 2.4E-264 T 22-04-2016 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 3.0E-70 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 3.0E-70 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 3.0E-70 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 233 250 3.0E-70 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 3.0E-70 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 261 280 3.0E-70 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 PANTHER PTHR34501 2 350 2.4E-264 T 22-04-2016 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 Pfam PF00267 Gram-negative porin 27 350 6.2E-145 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 Gene3D G3DSA:2.40.160.10 22 350 5.5E-104 T 22-04-2016 IPR023614 Porin domain APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 305 321 - T 22-04-2016 IPR013793 Porin, Gram-negative type, conserved site APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 SUPERFAMILY SSF56935 22 350 1.77E-79 T 22-04-2016 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.7E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 227 239 1.7E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 1.7E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 305 322 1.7E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS17925 f7a39e94eda9afb8b41b525209f92e44 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 1.7E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS17690 5ea4f95bcc5cf30af881706f5b0dbd79 692 PANTHER PTHR30183:SF7 132 688 0.0 T 22-04-2016 APT61_RS17690 5ea4f95bcc5cf30af881706f5b0dbd79 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 501 677 8.4E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS17690 5ea4f95bcc5cf30af881706f5b0dbd79 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 210 402 1.9E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS17690 5ea4f95bcc5cf30af881706f5b0dbd79 692 Gene3D G3DSA:1.10.3720.10 146 404 1.2E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS17690 5ea4f95bcc5cf30af881706f5b0dbd79 692 Gene3D G3DSA:1.10.3720.10 431 681 1.3E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS17690 5ea4f95bcc5cf30af881706f5b0dbd79 692 PANTHER PTHR30183 132 688 0.0 T 22-04-2016 APT61_RS17690 5ea4f95bcc5cf30af881706f5b0dbd79 692 SUPERFAMILY SSF161098 140 405 3.66E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS17690 5ea4f95bcc5cf30af881706f5b0dbd79 692 SUPERFAMILY SSF161098 434 674 2.06E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS12720 c63d8a0691e2288b0c8b9e66c2fa9252 382 Gene3D G3DSA:3.40.50.150 117 371 1.2E-96 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS12720 c63d8a0691e2288b0c8b9e66c2fa9252 382 PANTHER PTHR10108:SF795 305 372 1.2E-110 T 22-04-2016 APT61_RS12720 c63d8a0691e2288b0c8b9e66c2fa9252 382 PANTHER PTHR10108:SF795 45 289 1.2E-110 T 22-04-2016 APT61_RS12720 c63d8a0691e2288b0c8b9e66c2fa9252 382 PANTHER PTHR10108 305 372 1.2E-110 T 22-04-2016 APT61_RS12720 c63d8a0691e2288b0c8b9e66c2fa9252 382 PANTHER PTHR10108 45 289 1.2E-110 T 22-04-2016 APT61_RS12720 c63d8a0691e2288b0c8b9e66c2fa9252 382 SUPERFAMILY SSF53335 117 373 6.41E-81 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS12720 c63d8a0691e2288b0c8b9e66c2fa9252 382 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 1.7E-102 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS12720 c63d8a0691e2288b0c8b9e66c2fa9252 382 PIRSF PIRSF003085 7 381 3.2E-127 T 22-04-2016 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 APT61_RS06705 9c569fa038b2fe3f6c429ae551b6f143 235 Hamap MF_02022 Cell division protein DedD [dedD]. 10 234 24.414 T 22-04-2016 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 APT61_RS06705 9c569fa038b2fe3f6c429ae551b6f143 235 SUPERFAMILY SSF110997 155 230 4.84E-12 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APT61_RS06705 9c569fa038b2fe3f6c429ae551b6f143 235 PANTHER PTHR38687:SF1 2 235 3.9E-64 T 22-04-2016 APT61_RS06705 9c569fa038b2fe3f6c429ae551b6f143 235 Pfam PF05036 Sporulation related domain 156 229 1.0E-11 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APT61_RS06705 9c569fa038b2fe3f6c429ae551b6f143 235 PANTHER PTHR38687 2 235 3.9E-64 T 22-04-2016 APT61_RS06705 9c569fa038b2fe3f6c429ae551b6f143 235 Gene3D G3DSA:3.30.70.1070 152 230 7.8E-14 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APT61_RS05955 b01e64685c750a3b3f1591633ce1cf1c 66 Gene3D G3DSA:1.10.10.600 1 66 4.7E-34 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APT61_RS05955 b01e64685c750a3b3f1591633ce1cf1c 66 PANTHER PTHR37532:SF1 1 66 4.8E-35 T 22-04-2016 APT61_RS05955 b01e64685c750a3b3f1591633ce1cf1c 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 1.8E-31 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APT61_RS05955 b01e64685c750a3b3f1591633ce1cf1c 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 1.8E-31 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APT61_RS05955 b01e64685c750a3b3f1591633ce1cf1c 66 SUPERFAMILY SSF140319 3 64 2.88E-26 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APT61_RS05955 b01e64685c750a3b3f1591633ce1cf1c 66 PANTHER PTHR37532 1 66 4.8E-35 T 22-04-2016 APT61_RS05955 b01e64685c750a3b3f1591633ce1cf1c 66 PIRSF PIRSF039003 3 66 7.4E-32 T 22-04-2016 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 APT61_RS14940 a950ad5711f1c18e0b7597bb2756b035 331 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 319 1.0E-113 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APT61_RS14940 a950ad5711f1c18e0b7597bb2756b035 331 PANTHER PTHR30160 1 326 7.9E-100 T 22-04-2016 APT61_RS14940 a950ad5711f1c18e0b7597bb2756b035 331 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 325 40.286 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APT61_RS14940 a950ad5711f1c18e0b7597bb2756b035 331 Gene3D G3DSA:3.40.50.300 187 199 4.0E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14940 a950ad5711f1c18e0b7597bb2756b035 331 Gene3D G3DSA:3.40.50.300 45 108 4.0E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14940 a950ad5711f1c18e0b7597bb2756b035 331 SUPERFAMILY SSF52540 46 163 9.11E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14940 a950ad5711f1c18e0b7597bb2756b035 331 PANTHER PTHR30160:SF13 1 326 7.9E-100 T 22-04-2016 APT61_RS14940 a950ad5711f1c18e0b7597bb2756b035 331 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 321 2.7E-111 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 APT61_RS14625 ddeb499a569c37936775aad33218aaba 607 Gene3D G3DSA:1.10.3720.10 88 308 1.5E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS14625 ddeb499a569c37936775aad33218aaba 607 PANTHER PTHR30193 1 317 3.7E-42 T 22-04-2016 APT61_RS14625 ddeb499a569c37936775aad33218aaba 607 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 298 1.8E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS14625 ddeb499a569c37936775aad33218aaba 607 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 416 591 9.2E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS14625 ddeb499a569c37936775aad33218aaba 607 Gene3D G3DSA:1.10.3720.10 322 594 2.2E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS14625 ddeb499a569c37936775aad33218aaba 607 SUPERFAMILY SSF161098 29 308 1.57E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS14625 ddeb499a569c37936775aad33218aaba 607 SUPERFAMILY SSF161098 329 603 5.23E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09715 0416bc03cb15397d6d3c9bff4d41d990 262 PANTHER PTHR12110 1 262 2.6E-143 T 22-04-2016 APT61_RS09715 0416bc03cb15397d6d3c9bff4d41d990 262 Gene3D G3DSA:3.20.20.150 1 260 1.1E-52 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS09715 0416bc03cb15397d6d3c9bff4d41d990 262 PANTHER PTHR12110:SF13 1 262 2.6E-143 T 22-04-2016 APT61_RS09715 0416bc03cb15397d6d3c9bff4d41d990 262 Pfam PF01261 Xylose isomerase-like TIM barrel 19 213 4.1E-24 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS09715 0416bc03cb15397d6d3c9bff4d41d990 262 SUPERFAMILY SSF51658 1 260 3.87E-53 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS09735 118ff032be44dd39d7b5fc91145b2fb1 360 SMART SM00382 29 211 4.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS09735 118ff032be44dd39d7b5fc91145b2fb1 360 Pfam PF08402 TOBE domain 282 351 1.1E-7 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APT61_RS09735 118ff032be44dd39d7b5fc91145b2fb1 360 Gene3D G3DSA:2.40.50.140 286 344 2.0E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS09735 118ff032be44dd39d7b5fc91145b2fb1 360 Pfam PF00005 ABC transporter 21 162 1.1E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS09735 118ff032be44dd39d7b5fc91145b2fb1 360 PANTHER PTHR24220 5 292 2.0E-165 T 22-04-2016 APT61_RS09735 118ff032be44dd39d7b5fc91145b2fb1 360 Gene3D G3DSA:3.40.50.300 3 235 3.6E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09735 118ff032be44dd39d7b5fc91145b2fb1 360 SUPERFAMILY SSF50331 237 359 5.1E-28 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APT61_RS09735 118ff032be44dd39d7b5fc91145b2fb1 360 Gene3D G3DSA:2.40.50.100 240 285 7.4E-22 T 22-04-2016 APT61_RS09735 118ff032be44dd39d7b5fc91145b2fb1 360 Gene3D G3DSA:2.40.50.100 345 360 7.4E-22 T 22-04-2016 APT61_RS09735 118ff032be44dd39d7b5fc91145b2fb1 360 PANTHER PTHR24220:SF151 5 292 2.0E-165 T 22-04-2016 APT61_RS09735 118ff032be44dd39d7b5fc91145b2fb1 360 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS09735 118ff032be44dd39d7b5fc91145b2fb1 360 SUPERFAMILY SSF52540 4 243 1.06E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02595 22a5d5a37deba5233a9a31bfacce7dad 366 PANTHER PTHR33529 2 363 1.3E-137 T 22-04-2016 APT61_RS02595 22a5d5a37deba5233a9a31bfacce7dad 366 PANTHER PTHR33529:SF2 2 363 1.3E-137 T 22-04-2016 APT61_RS02595 22a5d5a37deba5233a9a31bfacce7dad 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 345 2.2E-71 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 APT61_RS02595 22a5d5a37deba5233a9a31bfacce7dad 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 3.0E-116 T 22-04-2016 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 APT61_RS11500 9b8a9a841243f23a8fe78173495b17cc 253 SUPERFAMILY SSF100950 76 234 4.08E-27 T 22-04-2016 APT61_RS11500 9b8a9a841243f23a8fe78173495b17cc 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.7E-7 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS11500 9b8a9a841243f23a8fe78173495b17cc 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.7E-7 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS11500 9b8a9a841243f23a8fe78173495b17cc 253 Gene3D G3DSA:1.10.10.10 1 59 1.2E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11500 9b8a9a841243f23a8fe78173495b17cc 253 Pfam PF00455 DeoR C terminal sensor domain 77 232 5.7E-47 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APT61_RS11500 9b8a9a841243f23a8fe78173495b17cc 253 SMART SM01134 73 233 9.8E-65 T 22-04-2016 APT61_RS11500 9b8a9a841243f23a8fe78173495b17cc 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 2.1E-17 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS11500 9b8a9a841243f23a8fe78173495b17cc 253 SMART SM00420 6 58 6.5E-19 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 APT61_RS11500 9b8a9a841243f23a8fe78173495b17cc 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 APT61_RS11500 9b8a9a841243f23a8fe78173495b17cc 253 SUPERFAMILY SSF46785 5 68 7.45E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11500 9b8a9a841243f23a8fe78173495b17cc 253 PANTHER PTHR30363:SF13 1 244 3.1E-88 T 22-04-2016 APT61_RS11500 9b8a9a841243f23a8fe78173495b17cc 253 Gene3D G3DSA:3.40.50.1360 77 212 1.1E-9 T 22-04-2016 APT61_RS11500 9b8a9a841243f23a8fe78173495b17cc 253 PANTHER PTHR30363 1 244 3.1E-88 T 22-04-2016 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 395 648 4.8E-61 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 PANTHER PTHR30620 35 471 0.0 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 PANTHER PTHR30620 487 765 0.0 T 22-04-2016 IPR026892 Glycoside hydrolase family 3 GO:0004553 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 SUPERFAMILY SSF52279 395 464 1.02E-58 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 SUPERFAMILY SSF52279 495 651 1.02E-58 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 SMART SM01217 685 754 1.1E-31 T 22-04-2016 IPR026891 Fibronectin type III-like domain APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 PANTHER PTHR30620:SF5 35 471 0.0 T 22-04-2016 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 PANTHER PTHR30620:SF5 487 765 0.0 T 22-04-2016 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 Pfam PF14310 Fibronectin type III-like domain 686 753 4.9E-23 T 22-04-2016 IPR026891 Fibronectin type III-like domain APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 Gene3D G3DSA:3.40.50.1700 383 651 2.0E-80 T 22-04-2016 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 47 352 1.3E-99 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 2.4E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 166 182 2.4E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 117 2.4E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 120 139 2.4E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 2.4E-21 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 SUPERFAMILY SSF51445 34 394 1.37E-96 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 Gene3D G3DSA:3.20.20.300 35 366 8.5E-102 T 22-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 APT61_RS07365 b5ed3af5d6b379c0fb35c4310b010877 765 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 273 290 - T 22-04-2016 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 APT61_RS01140 5d7a85d156b765c3ff2382e84ffc8ef7 483 PIRSF PIRSF006247 1 483 1.9E-185 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 APT61_RS01140 5d7a85d156b765c3ff2382e84ffc8ef7 483 Pfam PF02386 Cation transport protein 37 477 6.7E-94 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 APT61_RS01140 5d7a85d156b765c3ff2382e84ffc8ef7 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 2.6E-129 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 APT61_RS01140 5d7a85d156b765c3ff2382e84ffc8ef7 483 PANTHER PTHR32024 1 483 3.5E-284 T 22-04-2016 APT61_RS01140 5d7a85d156b765c3ff2382e84ffc8ef7 483 PANTHER PTHR32024:SF2 1 483 3.5E-284 T 22-04-2016 APT61_RS17020 1e33244d886fe4e201fc8eb9c6848940 804 Pfam PF02687 FtsX-like permease family 683 794 3.0E-14 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APT61_RS17020 1e33244d886fe4e201fc8eb9c6848940 804 Pfam PF02687 FtsX-like permease family 247 364 6.5E-10 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APT61_RS17020 1e33244d886fe4e201fc8eb9c6848940 804 PANTHER PTHR30287 1 793 2.1E-168 T 22-04-2016 APT61_RS08580 45a1005fe13d40128cb5c0cb259fd8d1 261 Pfam PF00950 ABC 3 transport family 2 257 1.2E-86 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 APT61_RS08580 45a1005fe13d40128cb5c0cb259fd8d1 261 Gene3D G3DSA:1.10.3470.10 59 258 6.8E-11 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS08580 45a1005fe13d40128cb5c0cb259fd8d1 261 SUPERFAMILY SSF81345 3 257 3.66E-42 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS08580 45a1005fe13d40128cb5c0cb259fd8d1 261 PANTHER PTHR30477:SF0 9 259 3.1E-89 T 22-04-2016 APT61_RS08580 45a1005fe13d40128cb5c0cb259fd8d1 261 PANTHER PTHR30477 9 259 3.1E-89 T 22-04-2016 APT61_RS03110 0c7cea90cdf2f8940c08100ac10455ba 323 PANTHER PTHR34294:SF1 19 319 1.8E-128 T 22-04-2016 APT61_RS03110 0c7cea90cdf2f8940c08100ac10455ba 323 PANTHER PTHR34294 19 319 1.8E-128 T 22-04-2016 APT61_RS03110 0c7cea90cdf2f8940c08100ac10455ba 323 Gene3D G3DSA:3.40.50.1360 67 322 1.7E-64 T 22-04-2016 APT61_RS03110 0c7cea90cdf2f8940c08100ac10455ba 323 Pfam PF04198 Putative sugar-binding domain 71 320 1.2E-64 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 APT61_RS03110 0c7cea90cdf2f8940c08100ac10455ba 323 SUPERFAMILY SSF100950 71 321 4.65E-57 T 22-04-2016 APT61_RS21410 feb72dac953bebe106b941ffb2a5a45f 330 SUPERFAMILY SSF53822 24 317 2.17E-72 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS21410 feb72dac953bebe106b941ffb2a5a45f 330 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 9.7E-165 T 22-04-2016 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 APT61_RS21410 feb72dac953bebe106b941ffb2a5a45f 330 Gene3D G3DSA:3.40.50.2300 25 142 5.5E-36 T 22-04-2016 APT61_RS21410 feb72dac953bebe106b941ffb2a5a45f 330 Pfam PF13407 Periplasmic binding protein domain 38 285 2.9E-62 T 22-04-2016 IPR025997 Periplasmic binding protein APT61_RS21410 feb72dac953bebe106b941ffb2a5a45f 330 PANTHER PTHR30036:SF1 1 330 1.3E-172 T 22-04-2016 APT61_RS21410 feb72dac953bebe106b941ffb2a5a45f 330 PANTHER PTHR30036 1 330 1.3E-172 T 22-04-2016 APT61_RS21410 feb72dac953bebe106b941ffb2a5a45f 330 Gene3D G3DSA:3.40.50.2300 143 317 3.4E-47 T 22-04-2016 APT61_RS02445 5fa12f247de14e1736ded69f2d512386 310 PANTHER PTHR30367:SF3 4 308 2.2E-195 T 22-04-2016 APT61_RS02445 5fa12f247de14e1736ded69f2d512386 310 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 310 59.485 T 22-04-2016 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA APT61_RS02445 5fa12f247de14e1736ded69f2d512386 310 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 241 1.9E-33 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APT61_RS02445 5fa12f247de14e1736ded69f2d512386 310 Pfam PF13533 Biotin-lipoyl like 48 94 3.7E-18 T 22-04-2016 APT61_RS02445 5fa12f247de14e1736ded69f2d512386 310 Pfam PF13437 HlyD family secretion protein 156 240 2.7E-9 T 22-04-2016 APT61_RS02445 5fa12f247de14e1736ded69f2d512386 310 SUPERFAMILY SSF111369 46 212 2.09E-21 T 22-04-2016 APT61_RS02445 5fa12f247de14e1736ded69f2d512386 310 PANTHER PTHR30367 4 308 2.2E-195 T 22-04-2016 APT61_RS02445 5fa12f247de14e1736ded69f2d512386 310 Gene3D G3DSA:2.40.50.100 154 188 2.5E-17 T 22-04-2016 APT61_RS02445 5fa12f247de14e1736ded69f2d512386 310 Gene3D G3DSA:2.40.50.100 47 80 2.5E-17 T 22-04-2016 APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 PIRSF PIRSF037215 4 409 9.2E-147 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 Pfam PF01546 Peptidase family M20/M25/M40 143 402 1.8E-10 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 PANTHER PTHR11014:SF3 1 95 5.6E-153 T 22-04-2016 APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 PANTHER PTHR11014:SF3 135 409 5.6E-153 T 22-04-2016 APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 Gene3D G3DSA:3.40.630.10 325 407 5.6E-94 T 22-04-2016 APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 Gene3D G3DSA:3.40.630.10 8 212 5.6E-94 T 22-04-2016 APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 142 179 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 Gene3D G3DSA:3.30.70.360 213 322 4.1E-37 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 Pfam PF07687 Peptidase dimerisation domain 209 309 7.8E-8 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 SUPERFAMILY SSF55031 212 322 1.13E-33 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 PANTHER PTHR11014 1 95 5.6E-153 T 22-04-2016 APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 PANTHER PTHR11014 135 409 5.6E-153 T 22-04-2016 APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 SUPERFAMILY SSF53187 8 213 4.11E-70 T 22-04-2016 APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 SUPERFAMILY SSF53187 325 406 4.11E-70 T 22-04-2016 APT61_RS10595 2d5d6b09263c5eb3edede00ecb7e3a33 409 TIGRFAM TIGR01882 peptidase-T: peptidase T 8 404 6.4E-100 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 APT61_RS15625 77fb65f03ad0eee957a2075a414be241 369 PANTHER PTHR10283 33 369 2.2E-70 T 22-04-2016 APT61_RS15625 77fb65f03ad0eee957a2075a414be241 369 PANTHER PTHR10283:SF95 33 369 2.2E-70 T 22-04-2016 APT61_RS15625 77fb65f03ad0eee957a2075a414be241 369 Pfam PF03600 Citrate transporter 28 305 4.0E-27 T 22-04-2016 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 APT61_RS13160 52536e6bf6899c06cbf226c5322c98e4 321 PIRSF PIRSF017020 1 321 1.5E-114 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 APT61_RS13160 52536e6bf6899c06cbf226c5322c98e4 321 Gene3D G3DSA:3.40.630.10 33 227 7.1E-9 T 22-04-2016 APT61_RS13160 52536e6bf6899c06cbf226c5322c98e4 321 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 44 318 5.4E-64 T 22-04-2016 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 APT61_RS13160 52536e6bf6899c06cbf226c5322c98e4 321 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 317 2.9E-129 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 APT61_RS13160 52536e6bf6899c06cbf226c5322c98e4 321 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 321 145.665 T 22-04-2016 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96|UniPathway: UPA00185 APT61_RS13160 52536e6bf6899c06cbf226c5322c98e4 321 SUPERFAMILY SSF53187 1 319 1.45E-87 T 22-04-2016 APT61_RS13160 52536e6bf6899c06cbf226c5322c98e4 321 PANTHER PTHR15162 1 321 7.0E-82 T 22-04-2016 APT61_RS16830 19b69bb0f9bd2c565ba1ea466f16f937 522 PANTHER PTHR10907 190 462 3.7E-43 T 22-04-2016 APT61_RS16830 19b69bb0f9bd2c565ba1ea466f16f937 522 SUPERFAMILY SSF81296 146 273 2.94E-32 T 22-04-2016 IPR014756 Immunoglobulin E-set APT61_RS16830 19b69bb0f9bd2c565ba1ea466f16f937 522 PANTHER PTHR10907:SF55 190 462 3.7E-43 T 22-04-2016 APT61_RS16830 19b69bb0f9bd2c565ba1ea466f16f937 522 SUPERFAMILY SSF53474 283 515 5.58E-40 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS16830 19b69bb0f9bd2c565ba1ea466f16f937 522 Pfam PF11806 Domain of unknown function (DUF3327) 172 273 5.6E-17 T 22-04-2016 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 APT61_RS16830 19b69bb0f9bd2c565ba1ea466f16f937 522 Gene3D G3DSA:2.60.40.10 147 257 1.2E-28 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS16830 19b69bb0f9bd2c565ba1ea466f16f937 522 Pfam PF00756 Putative esterase 297 515 2.9E-26 T 22-04-2016 IPR000801 Putative esterase APT61_RS16830 19b69bb0f9bd2c565ba1ea466f16f937 522 Gene3D G3DSA:3.40.50.1820 287 517 4.3E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS12115 ad841696194e6fcb7ca80e26eee66f37 316 PANTHER PTHR31964:SF41 244 316 8.2E-76 T 22-04-2016 APT61_RS12115 ad841696194e6fcb7ca80e26eee66f37 316 PANTHER PTHR31964:SF41 1 88 8.2E-76 T 22-04-2016 APT61_RS12115 ad841696194e6fcb7ca80e26eee66f37 316 SUPERFAMILY SSF52402 4 155 5.94E-28 T 22-04-2016 APT61_RS12115 ad841696194e6fcb7ca80e26eee66f37 316 PANTHER PTHR31964 244 316 8.2E-76 T 22-04-2016 APT61_RS12115 ad841696194e6fcb7ca80e26eee66f37 316 PANTHER PTHR31964 1 88 8.2E-76 T 22-04-2016 APT61_RS12115 ad841696194e6fcb7ca80e26eee66f37 316 Gene3D G3DSA:3.40.50.620 1 142 2.4E-23 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS12115 ad841696194e6fcb7ca80e26eee66f37 316 SUPERFAMILY SSF52402 155 307 5.94E-24 T 22-04-2016 APT61_RS12115 ad841696194e6fcb7ca80e26eee66f37 316 Gene3D G3DSA:3.40.50.620 143 303 2.1E-30 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS12115 ad841696194e6fcb7ca80e26eee66f37 316 Pfam PF00582 Universal stress protein family 4 146 4.3E-20 T 22-04-2016 IPR006016 UspA GO:0006950 APT61_RS12115 ad841696194e6fcb7ca80e26eee66f37 316 Pfam PF00582 Universal stress protein family 174 300 8.3E-13 T 22-04-2016 IPR006016 UspA GO:0006950 APT61_RS07575 30585ed05cae267bafed5ee3ee71b9d2 79 ProDom PD865043 PLASMID SPA-ORF10 3'REGION CYTOPLASMIC ORF-10 SPAS STY1854 22 77 0.005 T 22-04-2016 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 APT61_RS07575 30585ed05cae267bafed5ee3ee71b9d2 79 Pfam PF10798 Biofilm development protein YmgB/AriR 26 63 6.0E-5 T 22-04-2016 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 APT61_RS09650 87f57c43f479074a1b50ef8725d18dbf 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 294 1.2E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09650 87f57c43f479074a1b50ef8725d18dbf 296 PANTHER PTHR30465:SF49 7 296 2.1E-185 T 22-04-2016 APT61_RS09650 87f57c43f479074a1b50ef8725d18dbf 296 SUPERFAMILY SSF161098 90 277 3.14E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09650 87f57c43f479074a1b50ef8725d18dbf 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 66 1.6E-7 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT61_RS09650 87f57c43f479074a1b50ef8725d18dbf 296 Gene3D G3DSA:1.10.3720.10 86 290 5.3E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09650 87f57c43f479074a1b50ef8725d18dbf 296 PANTHER PTHR30465 7 296 2.1E-185 T 22-04-2016 APT61_RS02140 d74118798bbc0e1f9f4c18abdc7872cb 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 3.2E-46 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02140 d74118798bbc0e1f9f4c18abdc7872cb 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.868 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02140 d74118798bbc0e1f9f4c18abdc7872cb 117 Gene3D G3DSA:3.30.420.100 24 117 4.0E-36 T 22-04-2016 APT61_RS02140 d74118798bbc0e1f9f4c18abdc7872cb 117 SUPERFAMILY SSF53137 3 115 2.4E-53 T 22-04-2016 APT61_RS02140 d74118798bbc0e1f9f4c18abdc7872cb 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 1.2E-43 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02140 d74118798bbc0e1f9f4c18abdc7872cb 117 PANTHER PTHR12899 1 117 5.5E-49 T 22-04-2016 APT61_RS16870 05fadd23412c0df9ff8c56a3db6558aa 345 Pfam PF09925 Predicted membrane protein (DUF2157) 17 168 1.4E-6 T 22-04-2016 IPR018677 Domain of unknown function DUF2157 APT61_RS03925 0ded588c11271e1c5f766d6ee4c18be9 90 Gene3D G3DSA:1.10.3880.10 1 90 1.1E-42 T 22-04-2016 APT61_RS03925 0ded588c11271e1c5f766d6ee4c18be9 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 5.0E-36 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APT61_RS03925 0ded588c11271e1c5f766d6ee4c18be9 90 SUPERFAMILY SSF111148 1 89 1.7E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APT61_RS03925 0ded588c11271e1c5f766d6ee4c18be9 90 PIRSF PIRSF029827 1 90 1.2E-43 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APT61_RS03925 0ded588c11271e1c5f766d6ee4c18be9 90 PANTHER PTHR36965 2 90 4.5E-54 T 22-04-2016 APT61_RS03925 0ded588c11271e1c5f766d6ee4c18be9 90 PANTHER PTHR36965:SF1 2 90 4.5E-54 T 22-04-2016 APT61_RS03925 0ded588c11271e1c5f766d6ee4c18be9 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 1.7E-39 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APT61_RS03925 0ded588c11271e1c5f766d6ee4c18be9 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.483 T 22-04-2016 IPR007457 Fe(II) trafficking protein YggX GO:0005506 APT61_RS00130 89565db49efae5b3244f55eba792fce7 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 3.1E-46 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 APT61_RS00130 89565db49efae5b3244f55eba792fce7 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 1.0E-41 T 22-04-2016 IPR009383 Protein of unknown function DUF1040 APT61_RS07760 d9962850f8a76a1a2e0a49eea21a1082 361 SUPERFAMILY SSF51735 2 356 1.98E-92 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07760 d9962850f8a76a1a2e0a49eea21a1082 361 PANTHER PTHR10366 2 357 1.1E-191 T 22-04-2016 APT61_RS07760 d9962850f8a76a1a2e0a49eea21a1082 361 Gene3D G3DSA:3.40.50.720 2 199 1.3E-64 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07760 d9962850f8a76a1a2e0a49eea21a1082 361 PANTHER PTHR10366:SF41 2 357 1.1E-191 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APT61_RS07760 d9962850f8a76a1a2e0a49eea21a1082 361 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 330 7.5E-97 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07760 d9962850f8a76a1a2e0a49eea21a1082 361 Gene3D G3DSA:3.90.25.10 200 354 7.8E-57 T 22-04-2016 APT61_RS07760 d9962850f8a76a1a2e0a49eea21a1082 361 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 344 6.8E-154 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APT61_RS04735 7a3bb5e5b8cc31fc6d38f1716af97647 253 Gene3D G3DSA:3.40.1210.10 1 246 1.2E-84 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APT61_RS04735 7a3bb5e5b8cc31fc6d38f1716af97647 253 PANTHER PTHR30457 1 247 5.3E-100 T 22-04-2016 APT61_RS04735 7a3bb5e5b8cc31fc6d38f1716af97647 253 Pfam PF01975 Survival protein SurE 3 180 1.1E-55 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APT61_RS04735 7a3bb5e5b8cc31fc6d38f1716af97647 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 40.224 T 22-04-2016 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APT61_RS04735 7a3bb5e5b8cc31fc6d38f1716af97647 253 SUPERFAMILY SSF64167 1 246 1.83E-82 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APT61_RS04735 7a3bb5e5b8cc31fc6d38f1716af97647 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 6.6E-78 T 22-04-2016 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 APT61_RS06800 c9bcbd0b8742b7064f9e90588416f66e 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 39.796 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU APT61_RS06800 c9bcbd0b8742b7064f9e90588416f66e 164 Pfam PF03887 YfbU domain 1 164 1.3E-70 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU APT61_RS06800 c9bcbd0b8742b7064f9e90588416f66e 164 SUPERFAMILY SSF116960 1 164 4.05E-71 T 22-04-2016 APT61_RS06800 c9bcbd0b8742b7064f9e90588416f66e 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 1.0E-88 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU APT61_RS06800 c9bcbd0b8742b7064f9e90588416f66e 164 PIRSF PIRSF006272 1 164 7.5E-80 T 22-04-2016 IPR005587 Uncharacterised protein family UPF0304, YfbU APT61_RS06800 c9bcbd0b8742b7064f9e90588416f66e 164 Gene3D G3DSA:1.10.3190.10 53 164 3.0E-51 T 22-04-2016 IPR023146 YfbU, alpha-helical bundle domain APT61_RS06800 c9bcbd0b8742b7064f9e90588416f66e 164 Gene3D G3DSA:1.10.287.680 1 52 9.2E-32 T 22-04-2016 IPR023145 YfbU, helix-hairpin domain APT61_RS06105 66c92cbe19b77f8aec12e6f497381479 393 PANTHER PTHR11360:SF126 3 383 1.9E-24 T 22-04-2016 APT61_RS06105 66c92cbe19b77f8aec12e6f497381479 393 Pfam PF07690 Major Facilitator Superfamily 23 343 1.2E-16 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS06105 66c92cbe19b77f8aec12e6f497381479 393 Gene3D G3DSA:1.20.1250.20 22 195 1.0E-14 T 22-04-2016 APT61_RS06105 66c92cbe19b77f8aec12e6f497381479 393 PANTHER PTHR11360 3 383 1.9E-24 T 22-04-2016 APT61_RS06105 66c92cbe19b77f8aec12e6f497381479 393 SUPERFAMILY SSF103473 22 380 3.01E-26 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 5.1E-33 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 SUPERFAMILY SSF55681 116 424 4.7E-100 T 22-04-2016 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 3.6E-182 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 PIRSF PIRSF001529 1 430 6.1E-185 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 Gene3D G3DSA:3.30.930.10 105 426 1.2E-142 T 22-04-2016 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 PANTHER PTHR11778 1 429 1.4E-224 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.689 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 SUPERFAMILY SSF46589 1 112 2.46E-32 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 7.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 7.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 7.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 7.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 7.1E-33 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 229 406 2.5E-37 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 PANTHER PTHR11778:SF0 1 429 1.4E-224 T 22-04-2016 APT61_RS15030 60a0114291db0323e72606d1d3f52657 430 Gene3D G3DSA:1.10.287.40 1 104 3.7E-28 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 APT61_RS09510 35e04f7c1afe65e466805e0f6f66d633 293 SMART SM00481 10 77 9.6E-18 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 APT61_RS09510 35e04f7c1afe65e466805e0f6f66d633 293 Gene3D G3DSA:3.20.20.140 164 268 3.9E-42 T 22-04-2016 APT61_RS09510 35e04f7c1afe65e466805e0f6f66d633 293 Gene3D G3DSA:3.20.20.140 10 95 3.9E-42 T 22-04-2016 APT61_RS09510 35e04f7c1afe65e466805e0f6f66d633 293 Pfam PF02811 PHP domain 11 170 2.8E-8 T 22-04-2016 IPR004013 PHP domain GO:0003824 APT61_RS09510 35e04f7c1afe65e466805e0f6f66d633 293 PANTHER PTHR30007 8 292 1.8E-108 T 22-04-2016 APT61_RS09510 35e04f7c1afe65e466805e0f6f66d633 293 SUPERFAMILY SSF89550 172 284 6.87E-53 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APT61_RS09510 35e04f7c1afe65e466805e0f6f66d633 293 SUPERFAMILY SSF89550 9 90 6.87E-53 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 APT61_RS09510 35e04f7c1afe65e466805e0f6f66d633 293 PANTHER PTHR30007:SF4 8 292 1.8E-108 T 22-04-2016 APT61_RS14525 5fe8f81f0ab93d39ddaf3ac30b027055 150 SUPERFAMILY SSF55729 1 127 1.4E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS14525 5fe8f81f0ab93d39ddaf3ac30b027055 150 PANTHER PTHR23091:SF122 1 125 6.8E-12 T 22-04-2016 APT61_RS14525 5fe8f81f0ab93d39ddaf3ac30b027055 150 Pfam PF13673 Acetyltransferase (GNAT) domain 41 127 1.2E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS14525 5fe8f81f0ab93d39ddaf3ac30b027055 150 Gene3D G3DSA:3.40.630.30 2 125 1.7E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS14525 5fe8f81f0ab93d39ddaf3ac30b027055 150 PANTHER PTHR23091 1 125 6.8E-12 T 22-04-2016 APT61_RS14450 b72872668d38766f0e044e08e5ab2333 150 PANTHER PTHR33204 1 136 5.7E-56 T 22-04-2016 APT61_RS14450 b72872668d38766f0e044e08e5ab2333 150 Pfam PF01638 HxlR-like helix-turn-helix 19 104 3.9E-19 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type APT61_RS14450 b72872668d38766f0e044e08e5ab2333 150 PANTHER PTHR33204:SF3 1 136 5.7E-56 T 22-04-2016 APT61_RS14450 b72872668d38766f0e044e08e5ab2333 150 Gene3D G3DSA:1.10.10.10 1 106 6.9E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14450 b72872668d38766f0e044e08e5ab2333 150 SUPERFAMILY SSF46785 6 143 1.15E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18845 25118cded7f18b631db79628ad1c709e 231 SUPERFAMILY SSF53639 1 223 1.33E-71 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS18845 25118cded7f18b631db79628ad1c709e 231 PANTHER PTHR22789 1 231 6.6E-159 T 22-04-2016 APT61_RS18845 25118cded7f18b631db79628ad1c709e 231 Hamap MF_00989 L-ribulose-5-phosphate 4-epimerase [araD]. 1 231 71.097 T 22-04-2016 APT61_RS18845 25118cded7f18b631db79628ad1c709e 231 Gene3D G3DSA:3.40.225.10 2 231 2.0E-75 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS18845 25118cded7f18b631db79628ad1c709e 231 PANTHER PTHR22789:SF8 1 231 6.6E-159 T 22-04-2016 APT61_RS18845 25118cded7f18b631db79628ad1c709e 231 SMART SM01007 7 198 1.4E-72 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS18845 25118cded7f18b631db79628ad1c709e 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 5.0E-134 T 22-04-2016 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 APT61_RS18845 25118cded7f18b631db79628ad1c709e 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 1.1E-48 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS20295 6dc4d2948e8fd2682fd79ab1b0b0255e 540 SUPERFAMILY SSF47203 283 443 4.67E-41 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APT61_RS20295 6dc4d2948e8fd2682fd79ab1b0b0255e 540 SUPERFAMILY SSF56645 86 292 3.38E-31 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APT61_RS20295 6dc4d2948e8fd2682fd79ab1b0b0255e 540 PANTHER PTHR10909:SF289 22 459 5.4E-233 T 22-04-2016 APT61_RS20295 6dc4d2948e8fd2682fd79ab1b0b0255e 540 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 183 195 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APT61_RS20295 6dc4d2948e8fd2682fd79ab1b0b0255e 540 PANTHER PTHR10909 22 459 5.4E-233 T 22-04-2016 APT61_RS20295 6dc4d2948e8fd2682fd79ab1b0b0255e 540 Gene3D G3DSA:2.40.110.10 181 281 2.7E-20 T 22-04-2016 APT61_RS20295 6dc4d2948e8fd2682fd79ab1b0b0255e 540 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 439 4.7E-30 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APT61_RS20295 6dc4d2948e8fd2682fd79ab1b0b0255e 540 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 273 6.9E-15 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 APT61_RS20295 6dc4d2948e8fd2682fd79ab1b0b0255e 540 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 398 417 - T 22-04-2016 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 APT61_RS20295 6dc4d2948e8fd2682fd79ab1b0b0255e 540 Gene3D G3DSA:1.20.140.10 282 444 3.0E-40 T 22-04-2016 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 1.2E-31 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 Gene3D G3DSA:3.40.50.720 464 635 7.6E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 SUPERFAMILY SSF51735 464 636 2.55E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 SUPERFAMILY SSF55347 614 798 4.71E-52 T 22-04-2016 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 Pfam PF01842 ACT domain 324 377 8.7E-10 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 SUPERFAMILY SSF53633 1 295 2.22E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 Pfam PF13840 ACT domain 392 453 2.7E-9 T 22-04-2016 IPR027795 GATS-like ACT domain APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 PANTHER PTHR21499:SF1 1 471 6.7E-188 T 22-04-2016 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 PANTHER PTHR21499 1 471 6.7E-188 T 22-04-2016 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 PIRSF PIRSF000727 1 818 0.0 T 22-04-2016 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00050|UniPathway: UPA00051|UniPathway: UPA00051 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 Gene3D G3DSA:3.40.1160.10 111 300 2.4E-67 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 Gene3D G3DSA:3.40.1160.10 1 49 2.4E-67 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 Pfam PF00742 Homoserine dehydrogenase 614 811 3.7E-48 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 Gene3D G3DSA:3.30.360.10 636 792 2.1E-56 T 22-04-2016 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 1.3E-150 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 SUPERFAMILY SSF55021 303 381 2.59E-22 T 22-04-2016 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 SUPERFAMILY SSF55021 383 476 2.95E-22 T 22-04-2016 APT61_RS19065 e01ef24ff661e67a3d3b39b346f20a23 820 Pfam PF00696 Amino acid kinase family 2 284 1.8E-45 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS00580 69f198dd4dc5b6a5d81885a264625651 731 PANTHER PTHR30580 1 730 3.0E-295 T 22-04-2016 APT61_RS00580 69f198dd4dc5b6a5d81885a264625651 731 Gene3D G3DSA:3.40.50.300 198 379 5.1E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00580 69f198dd4dc5b6a5d81885a264625651 731 Pfam PF00270 DEAD/DEAH box helicase 202 363 6.4E-16 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APT61_RS00580 69f198dd4dc5b6a5d81885a264625651 731 SUPERFAMILY SSF52540 212 439 2.73E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00580 69f198dd4dc5b6a5d81885a264625651 731 SUPERFAMILY SSF52540 502 600 2.73E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00580 69f198dd4dc5b6a5d81885a264625651 731 TIGRFAM TIGR00595 priA: primosomal protein N' 220 729 5.6E-217 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APT61_RS00580 69f198dd4dc5b6a5d81885a264625651 731 SMART SM00487 194 390 1.2E-19 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS00580 69f198dd4dc5b6a5d81885a264625651 731 SMART SM00490 491 588 9.8E-10 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS00580 69f198dd4dc5b6a5d81885a264625651 731 Pfam PF00271 Helicase conserved C-terminal domain 520 588 1.5E-5 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS00580 69f198dd4dc5b6a5d81885a264625651 731 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 731 26.187 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 APT61_RS00580 69f198dd4dc5b6a5d81885a264625651 731 Gene3D G3DSA:3.40.50.300 455 631 5.4E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07195 a20b815dfc1b142fdadca15afd695086 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 1.9E-67 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APT61_RS07195 a20b815dfc1b142fdadca15afd695086 312 PIRSF PIRSF000535 2 311 8.1E-118 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APT61_RS07195 a20b815dfc1b142fdadca15afd695086 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 1.2E-102 T 22-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 APT61_RS07195 a20b815dfc1b142fdadca15afd695086 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 4.4E-100 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 APT61_RS07195 a20b815dfc1b142fdadca15afd695086 312 SUPERFAMILY SSF53613 7 291 1.54E-68 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS07195 a20b815dfc1b142fdadca15afd695086 312 PANTHER PTHR10584:SF170 1 308 9.0E-129 T 22-04-2016 APT61_RS07195 a20b815dfc1b142fdadca15afd695086 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APT61_RS07195 a20b815dfc1b142fdadca15afd695086 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APT61_RS07195 a20b815dfc1b142fdadca15afd695086 312 PANTHER PTHR10584 1 308 9.0E-129 T 22-04-2016 APT61_RS07195 a20b815dfc1b142fdadca15afd695086 312 Gene3D G3DSA:3.40.1190.20 37 309 2.1E-85 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS01685 9c5be4ece452632fe37c8b595d51bacc 438 PANTHER PTHR30354:SF4 1 438 0.0 T 22-04-2016 APT61_RS01685 9c5be4ece452632fe37c8b595d51bacc 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 1.1E-198 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APT61_RS01685 9c5be4ece452632fe37c8b595d51bacc 438 PIRSF PIRSF002746 1 438 2.5E-158 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APT61_RS01685 9c5be4ece452632fe37c8b595d51bacc 438 Pfam PF02447 GntP family permease 1 437 2.3E-184 T 22-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 APT61_RS01685 9c5be4ece452632fe37c8b595d51bacc 438 PANTHER PTHR30354 1 438 0.0 T 22-04-2016 APT61_RS08570 a9a3554b4533df3d5ae4b5a40e4478b4 203 Pfam PF01330 RuvA N terminal domain 2 62 6.8E-19 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 APT61_RS08570 a9a3554b4533df3d5ae4b5a40e4478b4 203 Gene3D G3DSA:2.40.50.140 2 66 6.9E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS08570 a9a3554b4533df3d5ae4b5a40e4478b4 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 9.5E-72 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APT61_RS08570 a9a3554b4533df3d5ae4b5a40e4478b4 203 Gene3D G3DSA:1.10.8.10 157 200 1.8E-23 T 22-04-2016 APT61_RS08570 a9a3554b4533df3d5ae4b5a40e4478b4 203 Pfam PF07499 RuvA, C-terminal domain 159 201 1.6E-15 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APT61_RS08570 a9a3554b4533df3d5ae4b5a40e4478b4 203 SUPERFAMILY SSF46929 157 201 4.58E-11 T 22-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 APT61_RS08570 a9a3554b4533df3d5ae4b5a40e4478b4 203 PANTHER PTHR33796 2 201 2.3E-82 T 22-04-2016 APT61_RS08570 a9a3554b4533df3d5ae4b5a40e4478b4 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 5.5E-16 T 22-04-2016 APT61_RS08570 a9a3554b4533df3d5ae4b5a40e4478b4 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 32.338 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 APT61_RS08570 a9a3554b4533df3d5ae4b5a40e4478b4 203 SMART SM00278 73 92 1.3 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APT61_RS08570 a9a3554b4533df3d5ae4b5a40e4478b4 203 SMART SM00278 108 127 0.053 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APT61_RS08570 a9a3554b4533df3d5ae4b5a40e4478b4 203 SUPERFAMILY SSF47781 66 137 1.18E-21 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APT61_RS08570 a9a3554b4533df3d5ae4b5a40e4478b4 203 SUPERFAMILY SSF50249 2 63 6.85E-18 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS08570 a9a3554b4533df3d5ae4b5a40e4478b4 203 Gene3D G3DSA:1.10.150.20 67 138 3.9E-31 T 22-04-2016 APT61_RS07170 640a5bab47b246e7c986e3138d897718 396 Gene3D G3DSA:3.20.20.150 1 388 3.7E-149 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS07170 640a5bab47b246e7c986e3138d897718 396 PANTHER PTHR30387 1 396 7.5E-173 T 22-04-2016 APT61_RS07170 640a5bab47b246e7c986e3138d897718 396 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 2.3E-153 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APT61_RS07170 640a5bab47b246e7c986e3138d897718 396 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 390 3.7E-205 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APT61_RS07170 640a5bab47b246e7c986e3138d897718 396 PANTHER PTHR30387:SF2 1 396 7.5E-173 T 22-04-2016 APT61_RS07170 640a5bab47b246e7c986e3138d897718 396 PIRSF PIRSF016049 1 393 5.1E-178 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APT61_RS07170 640a5bab47b246e7c986e3138d897718 396 SUPERFAMILY SSF51658 1 133 1.87E-76 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS07170 640a5bab47b246e7c986e3138d897718 396 SUPERFAMILY SSF51658 163 383 1.87E-76 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS07170 640a5bab47b246e7c986e3138d897718 396 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 396 219.1 T 22-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 APT61_RS14645 cefd99d44cfa08677a7c2d3fd8bd13b4 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 59 4.6E-13 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS14645 cefd99d44cfa08677a7c2d3fd8bd13b4 344 SUPERFAMILY SSF47413 13 70 2.7E-14 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS14645 cefd99d44cfa08677a7c2d3fd8bd13b4 344 Pfam PF13377 Periplasmic binding protein-like domain 180 336 2.3E-26 T 22-04-2016 APT61_RS14645 cefd99d44cfa08677a7c2d3fd8bd13b4 344 SUPERFAMILY SSF53822 74 339 8.99E-45 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS14645 cefd99d44cfa08677a7c2d3fd8bd13b4 344 Gene3D G3DSA:3.40.50.2300 64 185 5.0E-20 T 22-04-2016 APT61_RS14645 cefd99d44cfa08677a7c2d3fd8bd13b4 344 Gene3D G3DSA:1.10.260.40 15 63 3.1E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS14645 cefd99d44cfa08677a7c2d3fd8bd13b4 344 SMART SM00354 12 82 1.5E-8 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS14645 cefd99d44cfa08677a7c2d3fd8bd13b4 344 PANTHER PTHR30146 14 338 2.0E-74 T 22-04-2016 APT61_RS14645 cefd99d44cfa08677a7c2d3fd8bd13b4 344 Gene3D G3DSA:3.40.50.2300 186 316 2.7E-38 T 22-04-2016 APT61_RS20495 8fe75f33dd5d29c3cdf836bf0bab741f 412 Pfam PF13520 Amino acid permease 8 390 3.0E-27 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS20495 8fe75f33dd5d29c3cdf836bf0bab741f 412 PIRSF PIRSF006060 1 411 1.5E-53 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS20495 8fe75f33dd5d29c3cdf836bf0bab741f 412 PANTHER PTHR11785 1 409 2.8E-156 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS20495 8fe75f33dd5d29c3cdf836bf0bab741f 412 PANTHER PTHR11785:SF415 1 409 2.8E-156 T 22-04-2016 APT61_RS08885 77964cf8b6c7b34201877f43235f04fb 91 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 27.802 T 22-04-2016 IPR027354 YcgL domain APT61_RS08885 77964cf8b6c7b34201877f43235f04fb 91 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 2.0E-35 T 22-04-2016 IPR027354 YcgL domain APT61_RS08885 77964cf8b6c7b34201877f43235f04fb 91 PANTHER PTHR38109 2 89 1.0E-37 T 22-04-2016 APT61_RS08885 77964cf8b6c7b34201877f43235f04fb 91 Pfam PF05166 YcgL domain 3 75 6.9E-33 T 22-04-2016 IPR027354 YcgL domain APT61_RS08885 77964cf8b6c7b34201877f43235f04fb 91 SUPERFAMILY SSF160191 1 89 2.88E-40 T 22-04-2016 APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 SUPERFAMILY SSF51735 1 259 2.07E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 Gene3D G3DSA:3.40.50.720 2 259 1.2E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.7E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.7E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 1.7E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.7E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.7E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.7E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 PANTHER PTHR24322:SF25 12 138 4.8E-58 T 22-04-2016 APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 PANTHER PTHR24322:SF25 154 186 4.8E-58 T 22-04-2016 APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 PANTHER PTHR24322 12 138 4.8E-58 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 PANTHER PTHR24322 154 186 4.8E-58 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.2E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01325 6f3cd772483248462c405136d5be60b1 264 Pfam PF00106 short chain dehydrogenase 8 198 1.8E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS17685 7258a8f8954a20948dc116fc50bfecba 343 PANTHER PTHR30006 22 341 2.7E-119 T 22-04-2016 APT61_RS17685 7258a8f8954a20948dc116fc50bfecba 343 SUPERFAMILY SSF53850 24 325 2.82E-70 T 22-04-2016 APT61_RS17685 7258a8f8954a20948dc116fc50bfecba 343 Pfam PF13343 Bacterial extracellular solute-binding protein 76 290 1.3E-32 T 22-04-2016 APT61_RS17685 7258a8f8954a20948dc116fc50bfecba 343 Gene3D G3DSA:3.40.190.10 1 123 1.8E-36 T 22-04-2016 APT61_RS17685 7258a8f8954a20948dc116fc50bfecba 343 Gene3D G3DSA:3.40.190.10 269 322 1.8E-36 T 22-04-2016 APT61_RS17685 7258a8f8954a20948dc116fc50bfecba 343 Gene3D G3DSA:3.40.190.10 129 268 7.5E-51 T 22-04-2016 APT61_RS17685 7258a8f8954a20948dc116fc50bfecba 343 PANTHER PTHR30006:SF2 22 341 2.7E-119 T 22-04-2016 APT61_RS17685 7258a8f8954a20948dc116fc50bfecba 343 PIRSF PIRSF002825 1 340 3.0E-70 T 22-04-2016 IPR026045 Ferric binding protein APT61_RS06190 70f22d40009ac4542b97eebdcebbf8e0 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 3.7E-123 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS06190 70f22d40009ac4542b97eebdcebbf8e0 292 SUPERFAMILY SSF51569 1 292 2.62E-99 T 22-04-2016 APT61_RS06190 70f22d40009ac4542b97eebdcebbf8e0 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.8E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS06190 70f22d40009ac4542b97eebdcebbf8e0 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.8E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS06190 70f22d40009ac4542b97eebdcebbf8e0 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.8E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS06190 70f22d40009ac4542b97eebdcebbf8e0 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.8E-35 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS06190 70f22d40009ac4542b97eebdcebbf8e0 292 SMART SM01130 1 290 6.7E-140 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS06190 70f22d40009ac4542b97eebdcebbf8e0 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 1.3E-125 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS06190 70f22d40009ac4542b97eebdcebbf8e0 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 65.371 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS06190 70f22d40009ac4542b97eebdcebbf8e0 292 Gene3D G3DSA:3.20.20.70 1 292 7.7E-117 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS06190 70f22d40009ac4542b97eebdcebbf8e0 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS06190 70f22d40009ac4542b97eebdcebbf8e0 292 PIRSF PIRSF001365 1 292 6.4E-97 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS06190 70f22d40009ac4542b97eebdcebbf8e0 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS17595 12989f1ff4ced806aecdb6038408c38f 239 Pfam PF06904 Extensin-like protein C-terminus 55 226 5.3E-54 T 22-04-2016 IPR009683 Extensin-like, C-terminal APT61_RS20825 2cfd8d8ea69da274443e9285a48c5636 548 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 546 5.5E-242 T 22-04-2016 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 APT61_RS20825 2cfd8d8ea69da274443e9285a48c5636 548 PANTHER PTHR10110:SF120 1 548 2.5E-208 T 22-04-2016 APT61_RS20825 2cfd8d8ea69da274443e9285a48c5636 548 PANTHER PTHR10110 1 548 2.5E-208 T 22-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 APT61_RS20825 2cfd8d8ea69da274443e9285a48c5636 548 Pfam PF00999 Sodium/hydrogen exchanger family 7 421 1.6E-76 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APT61_RS16665 268647a768fc511a126892b21f5f6593 70 SUPERFAMILY SSF160582 3 67 7.85E-24 T 22-04-2016 APT61_RS16665 268647a768fc511a126892b21f5f6593 70 PANTHER PTHR38444:SF2 3 67 1.2E-42 T 22-04-2016 APT61_RS16665 268647a768fc511a126892b21f5f6593 70 Pfam PF03621 MbtH-like protein 4 53 2.4E-21 T 22-04-2016 IPR005153 MbtH-like protein APT61_RS16665 268647a768fc511a126892b21f5f6593 70 Gene3D G3DSA:3.90.820.10 13 67 1.1E-21 T 22-04-2016 APT61_RS16665 268647a768fc511a126892b21f5f6593 70 PANTHER PTHR38444 3 67 1.2E-42 T 22-04-2016 APT61_RS16665 268647a768fc511a126892b21f5f6593 70 SMART SM00923 5 55 6.6E-23 T 22-04-2016 IPR005153 MbtH-like protein APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 SUPERFAMILY SSF54862 1 504 1.67E-183 T 22-04-2016 APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 Gene3D G3DSA:3.30.70.20 5 56 1.1E-10 T 22-04-2016 APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 Gene3D G3DSA:3.30.70.20 436 465 1.5E-76 T 22-04-2016 APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 Gene3D G3DSA:3.30.70.20 236 358 1.5E-76 T 22-04-2016 APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 Pfam PF13247 4Fe-4S dicluster domain 175 271 5.8E-38 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 Gene3D G3DSA:3.30.70.20 159 195 2.1E-12 T 22-04-2016 APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 Gene3D G3DSA:1.10.3650.10 359 434 1.2E-31 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 Gene3D G3DSA:3.30.70.20 196 235 2.6E-25 T 22-04-2016 APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 492 0.0 T 22-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 PANTHER PTHR11938 1 31 9.1E-128 T 22-04-2016 APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 PANTHER PTHR11938 170 336 9.1E-128 T 22-04-2016 APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 PANTHER PTHR11938 134 143 9.1E-128 T 22-04-2016 APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 1.3E-29 T 22-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 PANTHER PTHR11938:SF8 1 31 9.1E-128 T 22-04-2016 APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 PANTHER PTHR11938:SF8 170 336 9.1E-128 T 22-04-2016 APT61_RS09300 5e4c1aacb67d4163df02115bcdae97ec 511 PANTHER PTHR11938:SF8 134 143 9.1E-128 T 22-04-2016 APT61_RS14950 b24b23cb0d326600f9b5576bab38d8d6 754 Pfam PF03772 Competence protein 201 467 2.1E-51 T 22-04-2016 IPR004477 ComEC/Rec2-related protein APT61_RS14950 b24b23cb0d326600f9b5576bab38d8d6 754 Gene3D G3DSA:3.60.15.10 482 682 1.4E-25 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS14950 b24b23cb0d326600f9b5576bab38d8d6 754 SMART SM00849 508 689 4.7E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS14950 b24b23cb0d326600f9b5576bab38d8d6 754 PANTHER PTHR30619 3 748 6.1E-220 T 22-04-2016 APT61_RS14950 b24b23cb0d326600f9b5576bab38d8d6 754 SUPERFAMILY SSF56281 497 742 6.29E-43 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS14950 b24b23cb0d326600f9b5576bab38d8d6 754 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 66 718 9.5E-228 T 22-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 APT61_RS14950 b24b23cb0d326600f9b5576bab38d8d6 754 PANTHER PTHR30619:SF2 3 748 6.1E-220 T 22-04-2016 APT61_RS14950 b24b23cb0d326600f9b5576bab38d8d6 754 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 221 404 3.6E-46 T 22-04-2016 IPR004477 ComEC/Rec2-related protein APT61_RS14950 b24b23cb0d326600f9b5576bab38d8d6 754 Pfam PF00753 Metallo-beta-lactamase superfamily 505 679 1.3E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 Gene3D G3DSA:3.90.79.10 229 345 6.1E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 22-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 PANTHER PTHR10359 5 350 6.2E-122 T 22-04-2016 APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 2.0E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 Pfam PF00633 Helix-hairpin-helix motif 100 127 1.4E-8 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 167 1.1E-23 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 Gene3D G3DSA:1.10.1670.10 123 224 3.1E-41 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 22-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 SUPERFAMILY SSF48150 3 225 3.14E-80 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 SMART SM00478 39 190 2.1E-56 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 Gene3D G3DSA:1.10.340.30 22 122 2.9E-45 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 SMART SM00525 191 211 8.0E-6 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 277 8.4E-131 T 22-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 SUPERFAMILY SSF55811 220 344 5.75E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS03930 d547cf0b347dd4587a06add25711a676 350 Pfam PF14815 NUDIX domain 234 343 1.2E-22 T 22-04-2016 IPR029119 MutY, C-terminal APT61_RS19300 9f508d78c1af454939a7f2fd782ebd5e 147 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site APT61_RS19300 9f508d78c1af454939a7f2fd782ebd5e 147 Pfam PF01047 MarR family 29 86 3.4E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS19300 9f508d78c1af454939a7f2fd782ebd5e 147 TIGRFAM TIGR02337 HpaR: homoprotocatechuate degradation operon regulator, HpaR 4 133 4.8E-56 T 22-04-2016 IPR012712 Homoprotocatechuate degradation transcriptional regulator HpaR GO:0003677|GO:0010124|GO:0045892 APT61_RS19300 9f508d78c1af454939a7f2fd782ebd5e 147 SUPERFAMILY SSF46785 4 135 1.19E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19300 9f508d78c1af454939a7f2fd782ebd5e 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 3.6E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS19300 9f508d78c1af454939a7f2fd782ebd5e 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 3.6E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS19300 9f508d78c1af454939a7f2fd782ebd5e 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 3.6E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS19300 9f508d78c1af454939a7f2fd782ebd5e 147 PANTHER PTHR33164 1 146 3.7E-79 T 22-04-2016 APT61_RS19300 9f508d78c1af454939a7f2fd782ebd5e 147 PANTHER PTHR33164:SF13 1 146 3.7E-79 T 22-04-2016 APT61_RS19300 9f508d78c1af454939a7f2fd782ebd5e 147 SMART SM00347 22 122 1.7E-28 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS19300 9f508d78c1af454939a7f2fd782ebd5e 147 Gene3D G3DSA:1.10.10.10 3 133 8.9E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14375 5dad2e94a231b9b9cdabe05d3bc08d0e 131 PANTHER PTHR39176:SF1 1 129 1.8E-31 T 22-04-2016 APT61_RS14375 5dad2e94a231b9b9cdabe05d3bc08d0e 131 ProDom PD498860 RC0070 95 127 0.002 T 22-04-2016 APT61_RS14375 5dad2e94a231b9b9cdabe05d3bc08d0e 131 PANTHER PTHR39176 1 129 1.8E-31 T 22-04-2016 APT61_RS14375 5dad2e94a231b9b9cdabe05d3bc08d0e 131 Pfam PF07007 Protein of unknown function (DUF1311) 23 109 1.6E-21 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 APT61_RS20820 e78d914fd0bc9543a379e56b88e30e61 294 Gene3D G3DSA:3.40.190.10 91 172 1.4E-9 T 22-04-2016 APT61_RS20820 e78d914fd0bc9543a379e56b88e30e61 294 PANTHER PTHR30419:SF8 1 291 7.9E-134 T 22-04-2016 APT61_RS20820 e78d914fd0bc9543a379e56b88e30e61 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS20820 e78d914fd0bc9543a379e56b88e30e61 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS20820 e78d914fd0bc9543a379e56b88e30e61 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS20820 e78d914fd0bc9543a379e56b88e30e61 294 SUPERFAMILY SSF53850 90 288 1.45E-40 T 22-04-2016 APT61_RS20820 e78d914fd0bc9543a379e56b88e30e61 294 PANTHER PTHR30419 1 291 7.9E-134 T 22-04-2016 APT61_RS20820 e78d914fd0bc9543a379e56b88e30e61 294 Gene3D G3DSA:1.10.10.10 1 86 7.6E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20820 e78d914fd0bc9543a379e56b88e30e61 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.0E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS20820 e78d914fd0bc9543a379e56b88e30e61 294 Gene3D G3DSA:3.40.190.10 173 260 2.2E-22 T 22-04-2016 APT61_RS20820 e78d914fd0bc9543a379e56b88e30e61 294 Pfam PF03466 LysR substrate binding domain 89 287 1.9E-42 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS20820 e78d914fd0bc9543a379e56b88e30e61 294 SUPERFAMILY SSF46785 1 86 8.84E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS09630 2380cb83b4438be7c0f079f1c98973eb 335 SUPERFAMILY SSF69118 79 187 7.67E-12 T 22-04-2016 IPR029032 AhpD-like APT61_RS09630 2380cb83b4438be7c0f079f1c98973eb 335 SUPERFAMILY SSF69118 273 332 6.62E-8 T 22-04-2016 IPR029032 AhpD-like APT61_RS09630 2380cb83b4438be7c0f079f1c98973eb 335 Gene3D G3DSA:1.20.1290.10 80 191 3.7E-14 T 22-04-2016 IPR029032 AhpD-like APT61_RS09630 2380cb83b4438be7c0f079f1c98973eb 335 Gene3D G3DSA:1.20.1290.10 265 332 3.0E-12 T 22-04-2016 IPR029032 AhpD-like APT61_RS05145 e3fea0d5180104cf071fb2a4a1212fc9 201 SUPERFAMILY SSF48403 8 201 6.75E-45 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain APT61_RS05145 e3fea0d5180104cf071fb2a4a1212fc9 201 Pfam PF13637 Ankyrin repeats (many copies) 13 59 4.0E-11 T 22-04-2016 APT61_RS05145 e3fea0d5180104cf071fb2a4a1212fc9 201 PANTHER PTHR24198 12 201 2.6E-43 T 22-04-2016 APT61_RS05145 e3fea0d5180104cf071fb2a4a1212fc9 201 SMART SM00248 5 34 1.6 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 APT61_RS05145 e3fea0d5180104cf071fb2a4a1212fc9 201 SMART SM00248 107 134 1900.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 APT61_RS05145 e3fea0d5180104cf071fb2a4a1212fc9 201 SMART SM00248 176 201 1500.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 APT61_RS05145 e3fea0d5180104cf071fb2a4a1212fc9 201 SMART SM00248 138 172 0.53 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 APT61_RS05145 e3fea0d5180104cf071fb2a4a1212fc9 201 SMART SM00248 71 100 300.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 APT61_RS05145 e3fea0d5180104cf071fb2a4a1212fc9 201 SMART SM00248 38 67 0.013 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 APT61_RS05145 e3fea0d5180104cf071fb2a4a1212fc9 201 Pfam PF12796 Ankyrin repeats (3 copies) 112 200 5.5E-11 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain APT61_RS05145 e3fea0d5180104cf071fb2a4a1212fc9 201 Gene3D G3DSA:1.25.40.20 8 201 1.9E-44 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 SUPERFAMILY SSF81296 7 94 2.6E-15 T 22-04-2016 IPR014756 Immunoglobulin E-set APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 SUPERFAMILY SSF51445 91 509 4.61E-110 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 PANTHER PTHR10357 479 560 1.7E-107 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 PANTHER PTHR10357 3 276 1.7E-107 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 PANTHER PTHR10357 293 460 1.7E-107 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 Gene3D G3DSA:2.60.40.10 13 94 6.6E-22 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 PANTHER PTHR10357:SF110 479 560 1.7E-107 T 22-04-2016 APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 PANTHER PTHR10357:SF110 3 276 1.7E-107 T 22-04-2016 APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 PANTHER PTHR10357:SF110 293 460 1.7E-107 T 22-04-2016 APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 19 556 1.3E-211 T 22-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 Gene3D G3DSA:3.20.20.80 476 508 2.3E-80 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 Gene3D G3DSA:3.20.20.80 99 438 2.3E-80 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 Pfam PF11941 Domain of unknown function (DUF3459) 499 574 3.0E-12 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 PIRSF PIRSF006337 5 585 5.9E-212 T 22-04-2016 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00520+3.2.1.14|MetaCyc: PWY-2661|MetaCyc: PWY-6902|UniPathway: UPA00299 APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 SMART SM00642 94 507 1.2E-9 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS11245 903094cf05a186c74b6b454f667297f4 590 Pfam PF00128 Alpha amylase, catalytic domain 131 209 6.7E-13 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS17790 f71a3be78840a06a1be1c35afc5c49cd 116 Pfam PF06961 Protein of unknown function (DUF1294) 33 87 2.3E-23 T 22-04-2016 IPR010718 Protein of unknown function DUF1294 APT61_RS17790 f71a3be78840a06a1be1c35afc5c49cd 116 PANTHER PTHR12962:SF1 18 110 5.2E-32 T 22-04-2016 APT61_RS17790 f71a3be78840a06a1be1c35afc5c49cd 116 PANTHER PTHR12962 18 110 5.2E-32 T 22-04-2016 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 SUPERFAMILY SSF55874 289 453 3.13E-38 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 SMART SM00387 345 455 7.1E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 147 1.3E-10 T 22-04-2016 IPR032404 Two-component sensor protein CpxA, periplasmic domain APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 SUPERFAMILY SSF47384 224 299 4.32E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 Pfam PF00672 HAMP domain 165 234 7.2E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 Gene3D G3DSA:1.10.287.130 228 296 2.5E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 PANTHER PTHR24423 178 456 3.1E-260 T 22-04-2016 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 PANTHER PTHR24423 1 134 3.1E-260 T 22-04-2016 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 299 1.1E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 1.6E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 SMART SM00388 238 300 6.5E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 5.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 5.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 5.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 5.4E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 PANTHER PTHR24423:SF553 178 456 3.1E-260 T 22-04-2016 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 PANTHER PTHR24423:SF553 1 134 3.1E-260 T 22-04-2016 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 SMART SM00304 184 237 1.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS00460 6e37cfc1aeb54bbe998b00e2b97f01f9 457 Gene3D G3DSA:3.30.565.10 303 455 2.7E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS20245 6aa4866c6c97a89471157ac7f5a6eade 216 SUPERFAMILY SSF51366 2 215 3.33E-39 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APT61_RS20245 6aa4866c6c97a89471157ac7f5a6eade 216 SMART SM00934 5 207 7.7E-34 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS20245 6aa4866c6c97a89471157ac7f5a6eade 216 PANTHER PTHR35039 1 216 2.0E-147 T 22-04-2016 APT61_RS20245 6aa4866c6c97a89471157ac7f5a6eade 216 Gene3D G3DSA:3.20.20.70 2 215 7.9E-80 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS20245 6aa4866c6c97a89471157ac7f5a6eade 216 PANTHER PTHR35039:SF3 1 216 2.0E-147 T 22-04-2016 APT61_RS20245 6aa4866c6c97a89471157ac7f5a6eade 216 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 206 1.0E-29 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS18315 730b25499d747b130e76cc359ff1a410 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site APT61_RS18315 730b25499d747b130e76cc359ff1a410 114 Gene3D G3DSA:2.60.300.12 9 103 7.1E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis APT61_RS18315 730b25499d747b130e76cc359ff1a410 114 PANTHER PTHR10072 1 114 5.5E-49 T 22-04-2016 APT61_RS18315 730b25499d747b130e76cc359ff1a410 114 SUPERFAMILY SSF89360 8 103 3.92E-31 T 22-04-2016 IPR000361 FeS cluster biogenesis APT61_RS18315 730b25499d747b130e76cc359ff1a410 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 36.834 T 22-04-2016 IPR023063 FeS cluster insertion protein ErpA GO:0016226 APT61_RS18315 730b25499d747b130e76cc359ff1a410 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 9.3E-39 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 APT61_RS18315 730b25499d747b130e76cc359ff1a410 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 1.9E-20 T 22-04-2016 IPR000361 FeS cluster biogenesis APT61_RS20960 a1dc35f783c253bda436ac81c533efed 289 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 11 288 4.0E-111 T 22-04-2016 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 UniPathway: UPA00232 APT61_RS20960 a1dc35f783c253bda436ac81c533efed 289 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site APT61_RS20960 a1dc35f783c253bda436ac81c533efed 289 Pfam PF01040 UbiA prenyltransferase family 28 270 4.0E-69 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APT61_RS20960 a1dc35f783c253bda436ac81c533efed 289 PANTHER PTHR11048 9 288 3.3E-93 T 22-04-2016 APT61_RS20960 a1dc35f783c253bda436ac81c533efed 289 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.333 T 22-04-2016 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 UniPathway: UPA00232 APT61_RS10745 9b1138f0bdec5319531f7b3ee0eaa3ad 172 PANTHER PTHR23091:SF187 1 168 2.1E-92 T 22-04-2016 APT61_RS10745 9b1138f0bdec5319531f7b3ee0eaa3ad 172 Pfam PF13420 Acetyltransferase (GNAT) domain 3 154 6.4E-17 T 22-04-2016 APT61_RS10745 9b1138f0bdec5319531f7b3ee0eaa3ad 172 Gene3D G3DSA:3.40.630.30 1 165 7.8E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS10745 9b1138f0bdec5319531f7b3ee0eaa3ad 172 SUPERFAMILY SSF55729 2 165 1.12E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS10745 9b1138f0bdec5319531f7b3ee0eaa3ad 172 PANTHER PTHR23091 1 168 2.1E-92 T 22-04-2016 APT61_RS12550 574a631292013326ca2ccb2a34552663 192 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 43.267 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 APT61_RS12550 574a631292013326ca2ccb2a34552663 192 SUPERFAMILY SSF54862 38 176 1.08E-28 T 22-04-2016 APT61_RS12550 574a631292013326ca2ccb2a34552663 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS12550 574a631292013326ca2ccb2a34552663 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 117 128 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS12550 574a631292013326ca2ccb2a34552663 192 Gene3D G3DSA:3.30.70.20 121 177 1.6E-16 T 22-04-2016 APT61_RS12550 574a631292013326ca2ccb2a34552663 192 Pfam PF04060 Putative Fe-S cluster 44 76 1.4E-12 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 APT61_RS12550 574a631292013326ca2ccb2a34552663 192 PIRSF PIRSF005784 3 191 4.1E-84 T 22-04-2016 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 APT61_RS12550 574a631292013326ca2ccb2a34552663 192 Pfam PF14697 4Fe-4S dicluster domain 110 163 1.5E-16 T 22-04-2016 APT61_RS12550 574a631292013326ca2ccb2a34552663 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 191 2.7E-86 T 22-04-2016 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 APT61_RS12550 574a631292013326ca2ccb2a34552663 192 Gene3D G3DSA:1.10.1060.10 92 120 9.5E-4 T 22-04-2016 APT61_RS12550 574a631292013326ca2ccb2a34552663 192 PANTHER PTHR11938 1 189 1.2E-90 T 22-04-2016 APT61_RS12550 574a631292013326ca2ccb2a34552663 192 PANTHER PTHR11938:SF64 1 189 1.2E-90 T 22-04-2016 APT61_RS11150 28c03c7f95713c3496a88bc08f440294 314 Gene3D G3DSA:1.10.3720.10 92 299 1.2E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS11150 28c03c7f95713c3496a88bc08f440294 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 306 1.9E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS11150 28c03c7f95713c3496a88bc08f440294 314 PANTHER PTHR30465:SF0 1 308 4.2E-84 T 22-04-2016 APT61_RS11150 28c03c7f95713c3496a88bc08f440294 314 SUPERFAMILY SSF161098 93 292 2.13E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS11150 28c03c7f95713c3496a88bc08f440294 314 PANTHER PTHR30465 1 308 4.2E-84 T 22-04-2016 APT61_RS11155 2bb487cf572d62c5eaba9786dfb0edda 539 SUPERFAMILY SSF53850 26 537 1.21E-106 T 22-04-2016 APT61_RS11155 2bb487cf572d62c5eaba9786dfb0edda 539 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 439 2.4E-71 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS11155 2bb487cf572d62c5eaba9786dfb0edda 539 TIGRFAM TIGR04028 SBP_KPN_01854: ABC transporter substrate binding protein, KPN_01854 family 31 537 4.2E-264 T 22-04-2016 IPR023920 ABC transporter, substrate-binding protein, KPN01854 APT61_RS11155 2bb487cf572d62c5eaba9786dfb0edda 539 PIRSF PIRSF002741 5 539 3.9E-76 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APT61_RS11155 2bb487cf572d62c5eaba9786dfb0edda 539 Gene3D G3DSA:3.10.105.10 301 507 1.5E-40 T 22-04-2016 APT61_RS11155 2bb487cf572d62c5eaba9786dfb0edda 539 Gene3D G3DSA:3.90.76.10 43 190 1.6E-31 T 22-04-2016 APT61_RS11155 2bb487cf572d62c5eaba9786dfb0edda 539 PANTHER PTHR30290 28 537 4.2E-82 T 22-04-2016 APT61_RS11155 2bb487cf572d62c5eaba9786dfb0edda 539 Gene3D G3DSA:3.40.190.10 191 300 8.2E-22 T 22-04-2016 APT61_RS18395 1f9bd1e3a0a8be6ecdb75cc56778fabf 284 Gene3D G3DSA:3.30.1300.10 181 282 2.2E-29 T 22-04-2016 APT61_RS18395 1f9bd1e3a0a8be6ecdb75cc56778fabf 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 281 1.4E-116 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APT61_RS18395 1f9bd1e3a0a8be6ecdb75cc56778fabf 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 4.4E-102 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APT61_RS18395 1f9bd1e3a0a8be6ecdb75cc56778fabf 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.359 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APT61_RS18395 1f9bd1e3a0a8be6ecdb75cc56778fabf 284 SUPERFAMILY SSF52374 3 281 4.38E-104 T 22-04-2016 APT61_RS18395 1f9bd1e3a0a8be6ecdb75cc56778fabf 284 PANTHER PTHR21299 3 284 1.1E-134 T 22-04-2016 APT61_RS18395 1f9bd1e3a0a8be6ecdb75cc56778fabf 284 PANTHER PTHR21299:SF1 3 284 1.1E-134 T 22-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 APT61_RS18395 1f9bd1e3a0a8be6ecdb75cc56778fabf 284 Gene3D G3DSA:3.40.50.620 3 176 1.7E-76 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS03015 a8d5431ddc494df0275ac3943363c641 328 PIRSF PIRSF015753 4 324 4.9E-135 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 APT61_RS03015 a8d5431ddc494df0275ac3943363c641 328 SUPERFAMILY SSF47616 176 325 9.88E-36 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS03015 a8d5431ddc494df0275ac3943363c641 328 Pfam PF13410 Glutathione S-transferase, C-terminal domain 204 257 3.2E-13 T 22-04-2016 APT61_RS03015 a8d5431ddc494df0275ac3943363c641 328 PANTHER PTHR32419 1 325 4.2E-183 T 22-04-2016 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 APT61_RS03015 a8d5431ddc494df0275ac3943363c641 328 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 1.3E-23 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APT61_RS03015 a8d5431ddc494df0275ac3943363c641 328 Gene3D G3DSA:3.40.30.10 41 179 4.6E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS03015 a8d5431ddc494df0275ac3943363c641 328 SUPERFAMILY SSF52833 41 99 2.35E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS03015 a8d5431ddc494df0275ac3943363c641 328 SUPERFAMILY SSF52833 126 162 2.35E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS03015 a8d5431ddc494df0275ac3943363c641 328 Gene3D G3DSA:1.20.1050.10 180 288 3.6E-27 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS05915 dd1769d1263b23640abd63950d9063ec 242 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 241 1.1E-92 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APT61_RS05915 dd1769d1263b23640abd63950d9063ec 242 Gene3D G3DSA:3.40.1280.10 4 172 3.8E-33 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT61_RS05915 dd1769d1263b23640abd63950d9063ec 242 PANTHER PTHR12029 3 181 6.4E-48 T 22-04-2016 APT61_RS05915 dd1769d1263b23640abd63950d9063ec 242 Pfam PF00588 SpoU rRNA Methylase family 5 154 2.8E-33 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APT61_RS05915 dd1769d1263b23640abd63950d9063ec 242 SUPERFAMILY SSF75217 4 169 2.09E-39 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APT61_RS05915 dd1769d1263b23640abd63950d9063ec 242 PIRSF PIRSF004808 1 242 3.6E-78 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APT61_RS16540 6aa22fdc5457c5afa2ec9f5e2a7c6cf6 180 Gene3D G3DSA:2.60.120.10 4 178 1.1E-59 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS16540 6aa22fdc5457c5afa2ec9f5e2a7c6cf6 180 PANTHER PTHR23418 27 178 6.9E-35 T 22-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 APT61_RS16540 6aa22fdc5457c5afa2ec9f5e2a7c6cf6 180 Pfam PF03079 ARD/ARD' family 4 165 5.2E-38 T 22-04-2016 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|UniPathway: UPA00904 APT61_RS16540 6aa22fdc5457c5afa2ec9f5e2a7c6cf6 180 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 172 38.583 T 22-04-2016 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.53+1.13.11.54|MetaCyc: PWY-4361|MetaCyc: PWY-5389|UniPathway: UPA00904 APT61_RS16540 6aa22fdc5457c5afa2ec9f5e2a7c6cf6 180 SUPERFAMILY SSF51182 4 178 1.93E-45 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS10240 130626436b9f5426394224dfcc01fbf8 296 PANTHER PTHR12715:SF9 16 296 3.1E-112 T 22-04-2016 APT61_RS10240 130626436b9f5426394224dfcc01fbf8 296 SUPERFAMILY SSF103481 57 140 5.62E-7 T 22-04-2016 APT61_RS10240 130626436b9f5426394224dfcc01fbf8 296 PANTHER PTHR12715 16 296 3.1E-112 T 22-04-2016 APT61_RS10240 130626436b9f5426394224dfcc01fbf8 296 Pfam PF00892 EamA-like transporter family 157 288 9.3E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS10240 130626436b9f5426394224dfcc01fbf8 296 Pfam PF00892 EamA-like transporter family 15 139 8.7E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS10240 130626436b9f5426394224dfcc01fbf8 296 SUPERFAMILY SSF103481 191 291 6.28E-8 T 22-04-2016 APT61_RS15695 cc5e116a385be36ea42ace9e2bb5ceef 225 PANTHER PTHR41536 2 225 8.8E-129 T 22-04-2016 APT61_RS15695 cc5e116a385be36ea42ace9e2bb5ceef 225 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 84 175 7.5E-15 T 22-04-2016 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 APT61_RS15695 cc5e116a385be36ea42ace9e2bb5ceef 225 SUPERFAMILY SSF51197 4 177 2.86E-7 T 22-04-2016 APT61_RS15695 cc5e116a385be36ea42ace9e2bb5ceef 225 Hamap MF_00657 PKHD-type hydroxylase YbiX [ybiX]. 1 225 45.902 T 22-04-2016 IPR023550 PKHD-type hydroxylase GO:0016706|GO:0055114 APT61_RS15695 cc5e116a385be36ea42ace9e2bb5ceef 225 SMART SM00702 1 176 7.4E-28 T 22-04-2016 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 APT61_RS15695 cc5e116a385be36ea42ace9e2bb5ceef 225 PANTHER PTHR41536:SF1 2 225 8.8E-129 T 22-04-2016 APT61_RS15210 50ae64686777499712db9aa1096cbd44 147 PANTHER PTHR30093 9 142 5.8E-67 T 22-04-2016 APT61_RS15210 50ae64686777499712db9aa1096cbd44 147 PANTHER PTHR30093:SF9 9 142 5.8E-67 T 22-04-2016 APT61_RS15210 50ae64686777499712db9aa1096cbd44 147 Gene3D G3DSA:3.30.700.10 14 78 2.3E-8 T 22-04-2016 APT61_RS15210 50ae64686777499712db9aa1096cbd44 147 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 13 142 6.7E-53 T 22-04-2016 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 APT61_RS15210 50ae64686777499712db9aa1096cbd44 147 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 9 33 3.5E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS15210 50ae64686777499712db9aa1096cbd44 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 49 67 1.5E-21 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 APT61_RS15210 50ae64686777499712db9aa1096cbd44 147 PRINTS PR00813 Bacterial general secretion pathway protein G signature 13 38 1.5E-21 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 APT61_RS15210 50ae64686777499712db9aa1096cbd44 147 Pfam PF08334 Type II secretion system (T2SS), protein G 36 142 1.3E-36 T 22-04-2016 IPR013545 Type II secretion system protein G APT61_RS15210 50ae64686777499712db9aa1096cbd44 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 1.2E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS15210 50ae64686777499712db9aa1096cbd44 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site APT61_RS15210 50ae64686777499712db9aa1096cbd44 147 SUPERFAMILY SSF54523 39 143 1.15E-36 T 22-04-2016 APT61_RS17460 970de219c080242f352ad17d7bdd3385 323 Pfam PF02355 Protein export membrane protein 118 301 1.7E-68 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial APT61_RS17460 970de219c080242f352ad17d7bdd3385 323 Pfam PF07549 SecD/SecF GG Motif 40 66 1.4E-11 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site APT61_RS17460 970de219c080242f352ad17d7bdd3385 323 SUPERFAMILY SSF82866 79 303 8.63E-40 T 22-04-2016 APT61_RS17460 970de219c080242f352ad17d7bdd3385 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 125 289 7.2E-54 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APT61_RS17460 970de219c080242f352ad17d7bdd3385 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 292 2.7E-87 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APT61_RS17460 970de219c080242f352ad17d7bdd3385 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 303 27.977 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 APT61_RS17460 970de219c080242f352ad17d7bdd3385 323 Gene3D G3DSA:1.20.1640.10 136 305 1.5E-24 T 22-04-2016 APT61_RS17460 970de219c080242f352ad17d7bdd3385 323 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 1.3E-30 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APT61_RS17460 970de219c080242f352ad17d7bdd3385 323 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 1.3E-30 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APT61_RS17460 970de219c080242f352ad17d7bdd3385 323 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 1.3E-30 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APT61_RS17460 970de219c080242f352ad17d7bdd3385 323 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.3E-30 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial APT61_RS17460 970de219c080242f352ad17d7bdd3385 323 PANTHER PTHR30081 7 318 1.2E-92 T 22-04-2016 APT61_RS14660 bba869591345ee9f2884532311f50cc2 459 Gene3D G3DSA:2.40.170.10 81 459 1.5E-91 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS14660 bba869591345ee9f2884532311f50cc2 459 SUPERFAMILY SSF56935 80 459 4.4E-91 T 22-04-2016 APT61_RS14660 bba869591345ee9f2884532311f50cc2 459 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 357 452 0.008 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS14660 bba869591345ee9f2884532311f50cc2 459 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 108 207 3.0E-49 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS14660 bba869591345ee9f2884532311f50cc2 459 PANTHER PTHR38762 56 459 5.6E-12 T 22-04-2016 APT61_RS14660 bba869591345ee9f2884532311f50cc2 459 Pfam PF02264 LamB porin 82 459 4.6E-78 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS08905 21e09e27acd525bf263f151c920c6c69 512 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 2 511 2.4E-275 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 APT61_RS08905 21e09e27acd525bf263f151c920c6c69 512 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 512 346.826 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 APT61_RS08905 21e09e27acd525bf263f151c920c6c69 512 PANTHER PTHR10283:SF93 12 167 1.4E-277 T 22-04-2016 APT61_RS08905 21e09e27acd525bf263f151c920c6c69 512 PANTHER PTHR10283:SF93 194 512 1.4E-277 T 22-04-2016 APT61_RS08905 21e09e27acd525bf263f151c920c6c69 512 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 2 509 2.6E-274 T 22-04-2016 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 APT61_RS08905 21e09e27acd525bf263f151c920c6c69 512 PANTHER PTHR10283 12 167 1.4E-277 T 22-04-2016 APT61_RS08905 21e09e27acd525bf263f151c920c6c69 512 PANTHER PTHR10283 194 512 1.4E-277 T 22-04-2016 APT61_RS12855 ce14cf7dfc012762bd37970c3b83457b 270 PANTHER PTHR30429:SF0 1 270 5.0E-114 T 22-04-2016 APT61_RS12855 ce14cf7dfc012762bd37970c3b83457b 270 SUPERFAMILY SSF53850 24 268 8.51E-73 T 22-04-2016 APT61_RS12855 ce14cf7dfc012762bd37970c3b83457b 270 PIRSF PIRSF002854 2 269 3.5E-90 T 22-04-2016 IPR004872 Lipoprotein NlpA family APT61_RS12855 ce14cf7dfc012762bd37970c3b83457b 270 Pfam PF03180 NLPA lipoprotein 25 268 2.5E-77 T 22-04-2016 IPR004872 Lipoprotein NlpA family APT61_RS12855 ce14cf7dfc012762bd37970c3b83457b 270 Gene3D G3DSA:3.40.190.10 24 156 8.9E-49 T 22-04-2016 APT61_RS12855 ce14cf7dfc012762bd37970c3b83457b 270 PANTHER PTHR30429 1 270 5.0E-114 T 22-04-2016 IPR004872 Lipoprotein NlpA family APT61_RS17540 d8aca5c392078bba141fdf071efb602f 94 PANTHER PTHR36540:SF1 1 94 2.4E-48 T 22-04-2016 APT61_RS17540 d8aca5c392078bba141fdf071efb602f 94 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 6.5E-34 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 APT61_RS17540 d8aca5c392078bba141fdf071efb602f 94 Gene3D G3DSA:2.60.120.10 1 94 1.1E-37 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS17540 d8aca5c392078bba141fdf071efb602f 94 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 25.774 T 22-04-2016 IPR009664 Protein of unknown function DUF1255 APT61_RS17540 d8aca5c392078bba141fdf071efb602f 94 SUPERFAMILY SSF51182 1 94 1.9E-33 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS17540 d8aca5c392078bba141fdf071efb602f 94 PANTHER PTHR36540 1 94 2.4E-48 T 22-04-2016 APT61_RS15315 43f2e4ffcdb6966b8055d4f60cb483df 316 PANTHER PTHR30193 5 315 1.7E-159 T 22-04-2016 APT61_RS15315 43f2e4ffcdb6966b8055d4f60cb483df 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 312 1.3E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15315 43f2e4ffcdb6966b8055d4f60cb483df 316 Gene3D G3DSA:1.10.3720.10 26 305 3.6E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15315 43f2e4ffcdb6966b8055d4f60cb483df 316 SUPERFAMILY SSF161098 28 308 1.83E-56 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15315 43f2e4ffcdb6966b8055d4f60cb483df 316 PANTHER PTHR30193:SF5 5 315 1.7E-159 T 22-04-2016 APT61_RS18820 5f819417f9b08a261fc15600d58f51d2 231 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 213 4.6E-109 T 22-04-2016 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 APT61_RS18820 5f819417f9b08a261fc15600d58f51d2 231 Pfam PF00005 ABC transporter 18 157 1.7E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS18820 5f819417f9b08a261fc15600d58f51d2 231 PANTHER PTHR24220:SF439 1 217 1.5E-100 T 22-04-2016 APT61_RS18820 5f819417f9b08a261fc15600d58f51d2 231 SUPERFAMILY SSF52540 1 221 1.39E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18820 5f819417f9b08a261fc15600d58f51d2 231 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS18820 5f819417f9b08a261fc15600d58f51d2 231 PANTHER PTHR24220 1 217 1.5E-100 T 22-04-2016 APT61_RS18820 5f819417f9b08a261fc15600d58f51d2 231 Gene3D G3DSA:3.40.50.300 2 221 1.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18820 5f819417f9b08a261fc15600d58f51d2 231 SMART SM00382 24 209 2.0E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS06740 4b02aa694688199d32af8767d590108b 238 PANTHER PTHR30450:SF5 1 237 4.5E-186 T 22-04-2016 APT61_RS06740 4b02aa694688199d32af8767d590108b 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 220 2.8E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS06740 4b02aa694688199d32af8767d590108b 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 2.1E-13 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APT61_RS06740 4b02aa694688199d32af8767d590108b 238 PANTHER PTHR30450 1 237 4.5E-186 T 22-04-2016 APT61_RS06740 4b02aa694688199d32af8767d590108b 238 Gene3D G3DSA:1.10.3720.10 19 228 2.2E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS06740 4b02aa694688199d32af8767d590108b 238 SUPERFAMILY SSF161098 17 220 3.27E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS21835 5107eb480a8dfdeef7209b560102d3cd 241 SUPERFAMILY SSF46955 3 92 2.66E-20 T 22-04-2016 IPR009061 Putative DNA-binding domain APT61_RS21835 5107eb480a8dfdeef7209b560102d3cd 241 Pfam PF13411 MerR HTH family regulatory protein 3 70 1.4E-18 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS21835 5107eb480a8dfdeef7209b560102d3cd 241 PANTHER PTHR30204:SF19 1 233 9.4E-52 T 22-04-2016 APT61_RS21835 5107eb480a8dfdeef7209b560102d3cd 241 SMART SM00422 3 72 3.7E-24 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS21835 5107eb480a8dfdeef7209b560102d3cd 241 PANTHER PTHR30204 1 233 9.4E-52 T 22-04-2016 APT61_RS21835 5107eb480a8dfdeef7209b560102d3cd 241 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 29 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS21835 5107eb480a8dfdeef7209b560102d3cd 241 Gene3D G3DSA:1.10.1660.10 3 102 1.4E-20 T 22-04-2016 APT61_RS18240 3dac831db9e76c967f724c0ea17dfd3a 399 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 47.325 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS18240 3dac831db9e76c967f724c0ea17dfd3a 399 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 386 2.4E-42 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS18240 3dac831db9e76c967f724c0ea17dfd3a 399 Gene3D G3DSA:1.10.1740.10 313 394 6.0E-31 T 22-04-2016 APT61_RS18240 3dac831db9e76c967f724c0ea17dfd3a 399 SUPERFAMILY SSF51735 2 150 2.66E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS18240 3dac831db9e76c967f724c0ea17dfd3a 399 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 397 9.7E-190 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS18240 3dac831db9e76c967f724c0ea17dfd3a 399 Gene3D G3DSA:3.40.50.720 1 150 3.9E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS18240 3dac831db9e76c967f724c0ea17dfd3a 399 PANTHER PTHR30525 1 393 7.8E-235 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS18240 3dac831db9e76c967f724c0ea17dfd3a 399 PIRSF PIRSF006205 1 398 4.3E-158 T 22-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS18240 3dac831db9e76c967f724c0ea17dfd3a 399 SUPERFAMILY SSF69055 301 394 1.7E-31 T 22-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS18240 3dac831db9e76c967f724c0ea17dfd3a 399 SUPERFAMILY SSF55347 126 274 1.7E-62 T 22-04-2016 APT61_RS18240 3dac831db9e76c967f724c0ea17dfd3a 399 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.7E-48 T 22-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS18240 3dac831db9e76c967f724c0ea17dfd3a 399 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 2.8E-36 T 22-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 APT61_RS02650 51d5b50a0de94c2921e22fd38d938cb0 191 Pfam PF03968 OstA-like protein 37 149 1.4E-32 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal APT61_RS02650 51d5b50a0de94c2921e22fd38d938cb0 191 Gene3D G3DSA:2.60.450.10 29 163 3.0E-43 T 22-04-2016 APT61_RS02650 51d5b50a0de94c2921e22fd38d938cb0 191 PANTHER PTHR36504 1 185 5.1E-58 T 22-04-2016 APT61_RS02650 51d5b50a0de94c2921e22fd38d938cb0 191 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 28 166 9.3E-52 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 APT61_RS02650 51d5b50a0de94c2921e22fd38d938cb0 191 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 167 26.753 T 22-04-2016 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 Pfam PF02780 Transketolase, C-terminal domain 540 655 1.5E-19 T 22-04-2016 IPR033248 Transketolase, C-terminal domain APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 SMART SM00861 355 525 2.1E-64 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 Gene3D G3DSA:3.40.50.970 4 320 8.1E-133 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 Gene3D G3DSA:3.40.50.970 327 533 1.3E-79 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 Gene3D G3DSA:3.40.50.920 538 663 1.2E-52 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 SUPERFAMILY SSF52922 533 663 1.7E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 SUPERFAMILY SSF52518 5 331 6.43E-121 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 SUPERFAMILY SSF52518 336 526 1.99E-67 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 22-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 PANTHER PTHR11624:SF85 334 663 0.0 T 22-04-2016 APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 PANTHER PTHR11624:SF85 1 310 0.0 T 22-04-2016 APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 PANTHER PTHR11624 334 663 0.0 T 22-04-2016 IPR033247 Transketolase family APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 PANTHER PTHR11624 1 310 0.0 T 22-04-2016 IPR033247 Transketolase family APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 22-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 2.4E-171 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 APT61_RS04045 1d8de5294eef3f12709c793834c5daf1 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 4.4E-44 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APT61_RS05795 fa3e197a490ba9a06c04d53c57d08510 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 4.3E-14 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain APT61_RS05795 fa3e197a490ba9a06c04d53c57d08510 226 Gene3D G3DSA:1.10.1520.10 6 148 2.1E-48 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APT61_RS05795 fa3e197a490ba9a06c04d53c57d08510 226 SMART SM00358 156 224 6.2E-22 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain APT61_RS05795 fa3e197a490ba9a06c04d53c57d08510 226 SMART SM00535 21 149 3.6E-59 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APT61_RS05795 fa3e197a490ba9a06c04d53c57d08510 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APT61_RS05795 fa3e197a490ba9a06c04d53c57d08510 226 Pfam PF14622 Ribonuclease-III-like 20 141 3.4E-34 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APT61_RS05795 fa3e197a490ba9a06c04d53c57d08510 226 PANTHER PTHR11207 4 225 1.7E-112 T 22-04-2016 APT61_RS05795 fa3e197a490ba9a06c04d53c57d08510 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 222 2.6E-74 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APT61_RS05795 fa3e197a490ba9a06c04d53c57d08510 226 SUPERFAMILY SSF69065 5 159 2.62E-50 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 APT61_RS05795 fa3e197a490ba9a06c04d53c57d08510 226 Gene3D G3DSA:3.30.160.20 153 223 3.2E-28 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain APT61_RS05795 fa3e197a490ba9a06c04d53c57d08510 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.57 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 APT61_RS05795 fa3e197a490ba9a06c04d53c57d08510 226 SUPERFAMILY SSF54768 109 223 5.66E-27 T 22-04-2016 APT61_RS04450 b622d3e637e73c30b34f160dc3ef8af2 107 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 33 104 1.9E-23 T 22-04-2016 IPR022204 Prepilin peptidase dependent protein C APT61_RS12700 fdf0461fc67c1be4f44ab5e04187fbdd 388 Pfam PF07690 Major Facilitator Superfamily 10 341 2.8E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS12700 fdf0461fc67c1be4f44ab5e04187fbdd 388 PANTHER PTHR23501 1 382 9.1E-152 T 22-04-2016 APT61_RS12700 fdf0461fc67c1be4f44ab5e04187fbdd 388 Gene3D G3DSA:1.20.1250.20 200 379 2.0E-11 T 22-04-2016 APT61_RS12700 fdf0461fc67c1be4f44ab5e04187fbdd 388 Gene3D G3DSA:1.20.1250.20 7 192 1.1E-25 T 22-04-2016 APT61_RS12700 fdf0461fc67c1be4f44ab5e04187fbdd 388 PANTHER PTHR23501:SF4 1 382 9.1E-152 T 22-04-2016 APT61_RS12700 fdf0461fc67c1be4f44ab5e04187fbdd 388 SUPERFAMILY SSF103473 5 379 4.32E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS04980 705d8b3f6e089739740d3c554add32c9 116 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 114 23.091 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APT61_RS04980 705d8b3f6e089739740d3c554add32c9 116 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 113 4.6E-31 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APT61_RS04980 705d8b3f6e089739740d3c554add32c9 116 PIRSF PIRSF004761 1 116 3.9E-36 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APT61_RS04980 705d8b3f6e089739740d3c554add32c9 116 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 116 9.6E-42 T 22-04-2016 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 APT61_RS04980 705d8b3f6e089739740d3c554add32c9 116 PANTHER PTHR34535:SF1 2 116 8.9E-73 T 22-04-2016 APT61_RS04980 705d8b3f6e089739740d3c554add32c9 116 PANTHER PTHR34535 2 116 8.9E-73 T 22-04-2016 APT61_RS04980 705d8b3f6e089739740d3c554add32c9 116 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 22-04-2016 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site APT61_RS20990 b0d318530ac3740ce1144eb3bfac7439 514 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 100 260 1.9E-59 T 22-04-2016 IPR029345 Maltose transport system permease protein MalF, P2 domain APT61_RS20990 b0d318530ac3740ce1144eb3bfac7439 514 PANTHER PTHR30193 37 105 1.2E-149 T 22-04-2016 APT61_RS20990 b0d318530ac3740ce1144eb3bfac7439 514 PANTHER PTHR30193 259 511 1.2E-149 T 22-04-2016 APT61_RS20990 b0d318530ac3740ce1144eb3bfac7439 514 SUPERFAMILY SSF161098 261 503 1.31E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS20990 b0d318530ac3740ce1144eb3bfac7439 514 Gene3D G3DSA:1.10.3720.10 275 510 7.9E-62 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS20990 b0d318530ac3740ce1144eb3bfac7439 514 PANTHER PTHR30193:SF22 37 105 1.2E-149 T 22-04-2016 APT61_RS20990 b0d318530ac3740ce1144eb3bfac7439 514 PANTHER PTHR30193:SF22 259 511 1.2E-149 T 22-04-2016 APT61_RS20990 b0d318530ac3740ce1144eb3bfac7439 514 Gene3D G3DSA:3.10.650.10 196 269 1.8E-38 T 22-04-2016 APT61_RS20990 b0d318530ac3740ce1144eb3bfac7439 514 Gene3D G3DSA:1.20.58.370 3 95 5.3E-39 T 22-04-2016 APT61_RS20990 b0d318530ac3740ce1144eb3bfac7439 514 Gene3D G3DSA:2.40.430.10 118 195 9.5E-35 T 22-04-2016 APT61_RS20990 b0d318530ac3740ce1144eb3bfac7439 514 SUPERFAMILY SSF160964 15 260 4.32E-87 T 22-04-2016 APT61_RS20990 b0d318530ac3740ce1144eb3bfac7439 514 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 298 501 7.0E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS02755 7facb0e25654d61b7ccd12b68b30588c 158 SUPERFAMILY SSF46557 3 78 6.67E-29 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APT61_RS02755 7facb0e25654d61b7ccd12b68b30588c 158 PANTHER PTHR30437 1 157 5.8E-77 T 22-04-2016 APT61_RS02755 7facb0e25654d61b7ccd12b68b30588c 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APT61_RS02755 7facb0e25654d61b7ccd12b68b30588c 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 2.0E-60 T 22-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 APT61_RS02755 7facb0e25654d61b7ccd12b68b30588c 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 7.9E-29 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APT61_RS02755 7facb0e25654d61b7ccd12b68b30588c 158 PIRSF PIRSF006092 1 158 6.1E-54 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APT61_RS02755 7facb0e25654d61b7ccd12b68b30588c 158 SUPERFAMILY SSF54534 81 157 1.22E-24 T 22-04-2016 APT61_RS02755 7facb0e25654d61b7ccd12b68b30588c 158 Gene3D G3DSA:1.10.287.180 1 75 2.3E-35 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APT61_RS02755 7facb0e25654d61b7ccd12b68b30588c 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APT61_RS02755 7facb0e25654d61b7ccd12b68b30588c 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 9.3E-32 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APT61_RS02755 7facb0e25654d61b7ccd12b68b30588c 158 Gene3D G3DSA:3.10.50.30 79 157 6.8E-32 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APT61_RS02755 7facb0e25654d61b7ccd12b68b30588c 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 34.062 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 APT61_RS21460 5dc15684ab707213bfed35811f1638c6 652 Gene3D G3DSA:1.50.10.10 69 303 3.8E-19 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APT61_RS21460 5dc15684ab707213bfed35811f1638c6 652 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 12 560 3.3E-168 T 22-04-2016 IPR012878 Beta-L-arabinofuranosidase, GH127 KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18 APT61_RS21460 5dc15684ab707213bfed35811f1638c6 652 PANTHER PTHR31151 265 651 2.8E-288 T 22-04-2016 APT61_RS21460 5dc15684ab707213bfed35811f1638c6 652 PANTHER PTHR31151 3 239 2.8E-288 T 22-04-2016 APT61_RS21460 5dc15684ab707213bfed35811f1638c6 652 SUPERFAMILY SSF48208 16 426 1.79E-39 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APT61_RS21460 5dc15684ab707213bfed35811f1638c6 652 PANTHER PTHR31151:SF1 265 651 2.8E-288 T 22-04-2016 APT61_RS21460 5dc15684ab707213bfed35811f1638c6 652 PANTHER PTHR31151:SF1 3 239 2.8E-288 T 22-04-2016 APT61_RS20395 413c20dfa36a0ddb9e3ff642352cf384 358 SUPERFAMILY SSF52540 122 348 7.9E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20395 413c20dfa36a0ddb9e3ff642352cf384 358 PANTHER PTHR32120:SF2 11 358 8.2E-162 T 22-04-2016 APT61_RS20395 413c20dfa36a0ddb9e3ff642352cf384 358 Pfam PF03193 Protein of unknown function, DUF258 108 284 1.7E-56 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 APT61_RS20395 413c20dfa36a0ddb9e3ff642352cf384 358 Gene3D G3DSA:1.10.40.50 284 353 9.3E-24 T 22-04-2016 APT61_RS20395 413c20dfa36a0ddb9e3ff642352cf384 358 Gene3D G3DSA:3.40.50.300 123 283 2.7E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20395 413c20dfa36a0ddb9e3ff642352cf384 358 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 81 341 1.1E-95 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 APT61_RS20395 413c20dfa36a0ddb9e3ff642352cf384 358 PANTHER PTHR32120 11 358 8.2E-162 T 22-04-2016 APT61_RS20395 413c20dfa36a0ddb9e3ff642352cf384 358 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 48 348 37.144 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 APT61_RS16105 7278065640fc3c2f6d31c0b6261bd7ca 935 Gene3D G3DSA:3.40.50.970 162 551 1.2E-77 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS16105 7278065640fc3c2f6d31c0b6261bd7ca 935 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 932 5.7E-54 T 22-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APT61_RS16105 7278065640fc3c2f6d31c0b6261bd7ca 935 Pfam PF00676 Dehydrogenase E1 component 221 513 9.6E-49 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 APT61_RS16105 7278065640fc3c2f6d31c0b6261bd7ca 935 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 932 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APT61_RS16105 7278065640fc3c2f6d31c0b6261bd7ca 935 SUPERFAMILY SSF52518 576 793 1.08E-52 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS16105 7278065640fc3c2f6d31c0b6261bd7ca 935 Pfam PF02779 Transketolase, pyrimidine binding domain 593 787 3.3E-66 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APT61_RS16105 7278065640fc3c2f6d31c0b6261bd7ca 935 PANTHER PTHR23152:SF4 1 935 0.0 T 22-04-2016 APT61_RS16105 7278065640fc3c2f6d31c0b6261bd7ca 935 PIRSF PIRSF000157 1 934 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APT61_RS16105 7278065640fc3c2f6d31c0b6261bd7ca 935 SMART SM00861 593 786 1.2E-63 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain APT61_RS16105 7278065640fc3c2f6d31c0b6261bd7ca 935 PANTHER PTHR23152 1 935 0.0 T 22-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APT61_RS16105 7278065640fc3c2f6d31c0b6261bd7ca 935 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.7E-16 T 22-04-2016 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 APT61_RS16105 7278065640fc3c2f6d31c0b6261bd7ca 935 Gene3D G3DSA:3.40.50.970 594 789 2.3E-25 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS16105 7278065640fc3c2f6d31c0b6261bd7ca 935 SUPERFAMILY SSF52518 120 548 1.43E-88 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS05535 fc0945304f9fd7da611b98c3206d67e1 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 71.714 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 APT61_RS05535 fc0945304f9fd7da611b98c3206d67e1 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 5.0E-65 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 APT61_RS05535 fc0945304f9fd7da611b98c3206d67e1 160 Gene3D G3DSA:2.40.280.10 13 133 2.6E-48 T 22-04-2016 IPR023620 Small protein B APT61_RS05535 fc0945304f9fd7da611b98c3206d67e1 160 PANTHER PTHR30308 1 160 6.8E-84 T 22-04-2016 APT61_RS05535 fc0945304f9fd7da611b98c3206d67e1 160 PANTHER PTHR30308:SF2 1 160 6.8E-84 T 22-04-2016 APT61_RS05535 fc0945304f9fd7da611b98c3206d67e1 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 7.8E-53 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 APT61_RS05535 fc0945304f9fd7da611b98c3206d67e1 160 Pfam PF01668 SmpB protein 13 75 1.4E-27 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 APT61_RS05535 fc0945304f9fd7da611b98c3206d67e1 160 SUPERFAMILY SSF74982 8 138 5.75E-50 T 22-04-2016 IPR023620 Small protein B APT61_RS05535 fc0945304f9fd7da611b98c3206d67e1 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site APT61_RS05830 b629a50ca5f176557b9f2f3a7728b8ca 297 PANTHER PTHR10088 1 297 1.5E-193 T 22-04-2016 APT61_RS05830 b629a50ca5f176557b9f2f3a7728b8ca 297 SUPERFAMILY SSF53697 4 248 2.89E-73 T 22-04-2016 APT61_RS05830 b629a50ca5f176557b9f2f3a7728b8ca 297 PANTHER PTHR10088:SF5 1 297 1.5E-193 T 22-04-2016 APT61_RS05830 b629a50ca5f176557b9f2f3a7728b8ca 297 Gene3D G3DSA:1.10.8.10 246 269 5.8E-4 T 22-04-2016 APT61_RS05830 b629a50ca5f176557b9f2f3a7728b8ca 297 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APT61_RS05830 b629a50ca5f176557b9f2f3a7728b8ca 297 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 43.441 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APT61_RS05830 b629a50ca5f176557b9f2f3a7728b8ca 297 SUPERFAMILY SSF46934 235 277 9.35E-6 T 22-04-2016 IPR009060 UBA-like GO:0005515 APT61_RS05830 b629a50ca5f176557b9f2f3a7728b8ca 297 Gene3D G3DSA:3.40.50.10490 4 245 1.5E-87 T 22-04-2016 APT61_RS05830 b629a50ca5f176557b9f2f3a7728b8ca 297 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 296 2.3E-126 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 APT61_RS05830 b629a50ca5f176557b9f2f3a7728b8ca 297 Pfam PF01380 SIS domain 126 207 1.2E-8 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APT61_RS12265 49b8d6f3b2b9da68a0cf9b8060e88532 256 Pfam PF05100 Phage minor tail protein L 32 251 5.8E-58 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APT61_RS12265 49b8d6f3b2b9da68a0cf9b8060e88532 256 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 8 251 1.1E-44 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APT61_RS06795 fd766fdb4eacff306d1222f4e12579c7 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 1.3E-57 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 APT61_RS06795 fd766fdb4eacff306d1222f4e12579c7 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 36.413 T 22-04-2016 IPR007334 Uncharacterised protein family UPF0208 APT61_RS05605 c7ef0f91a97c11452ef1a3d7782a6be2 129 Pfam PF11162 Protein of unknown function (DUF2946) 17 125 1.5E-16 T 22-04-2016 IPR021333 Protein of unknown function DUF2946 APT61_RS01110 3f4cc982547e1ba2a75abeae82dfad6e 498 SUPERFAMILY SSF50475 7 326 1.02E-127 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS01110 3f4cc982547e1ba2a75abeae82dfad6e 498 Gene3D G3DSA:1.20.5.570 459 497 9.4E-22 T 22-04-2016 APT61_RS01110 3f4cc982547e1ba2a75abeae82dfad6e 498 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 10 459 1.1E-189 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 APT61_RS01110 3f4cc982547e1ba2a75abeae82dfad6e 498 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 5 491 73.939 T 22-04-2016 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 APT61_RS01110 3f4cc982547e1ba2a75abeae82dfad6e 498 Gene3D G3DSA:3.40.1670.10 341 458 1.7E-55 T 22-04-2016 APT61_RS01110 3f4cc982547e1ba2a75abeae82dfad6e 498 PANTHER PTHR30108:SF1 5 498 3.1E-285 T 22-04-2016 APT61_RS01110 3f4cc982547e1ba2a75abeae82dfad6e 498 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 435 8.1E-172 T 22-04-2016 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978|UniPathway: UPA00232 APT61_RS01110 3f4cc982547e1ba2a75abeae82dfad6e 498 ProDom PD024571 NODULATION TRANSFERASE NODZ GLYCOSYLTRANSFERASE PLASMID Z 2.4.1.- PROBABLE FUCOSYLTRANSFERASE PROTEIN 400 488 0.004 T 22-04-2016 APT61_RS01110 3f4cc982547e1ba2a75abeae82dfad6e 498 SUPERFAMILY SSF143968 327 489 4.84E-67 T 22-04-2016 APT61_RS01110 3f4cc982547e1ba2a75abeae82dfad6e 498 PANTHER PTHR30108 5 498 3.1E-285 T 22-04-2016 APT61_RS12645 14d37e062a679a575a2c695ba9a3a520 172 PANTHER PTHR10003 1 172 2.6E-101 T 22-04-2016 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone MetaCyc: PWY-6854 APT61_RS12645 14d37e062a679a575a2c695ba9a3a520 172 PANTHER PTHR10003:SF40 1 172 2.6E-101 T 22-04-2016 APT61_RS12645 14d37e062a679a575a2c695ba9a3a520 172 SUPERFAMILY SSF49329 24 172 4.19E-46 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS12645 14d37e062a679a575a2c695ba9a3a520 172 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 161 172 - T 22-04-2016 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854 APT61_RS12645 14d37e062a679a575a2c695ba9a3a520 172 Gene3D G3DSA:2.60.40.200 23 172 2.9E-45 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS12645 14d37e062a679a575a2c695ba9a3a520 172 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 35 172 1.5E-30 T 22-04-2016 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 APT61_RS17915 14c2168a8c080058653723cc106e3eaf 417 Pfam PF00171 Aldehyde dehydrogenase family 5 282 6.0E-17 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS17915 14c2168a8c080058653723cc106e3eaf 417 PANTHER PTHR11063:SF8 1 417 1.5E-188 T 22-04-2016 APT61_RS17915 14c2168a8c080058653723cc106e3eaf 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 8.1E-193 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APT61_RS17915 14c2168a8c080058653723cc106e3eaf 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APT61_RS17915 14c2168a8c080058653723cc106e3eaf 417 SUPERFAMILY SSF53720 2 415 2.09E-115 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS17915 14c2168a8c080058653723cc106e3eaf 417 Gene3D G3DSA:3.40.605.10 2 220 9.1E-104 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS17915 14c2168a8c080058653723cc106e3eaf 417 Gene3D G3DSA:3.40.605.10 375 416 9.1E-104 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS17915 14c2168a8c080058653723cc106e3eaf 417 Gene3D G3DSA:3.40.309.10 223 374 1.1E-41 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS17915 14c2168a8c080058653723cc106e3eaf 417 PIRSF PIRSF000151 1 417 1.8E-176 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APT61_RS17915 14c2168a8c080058653723cc106e3eaf 417 PANTHER PTHR11063 1 417 1.5E-188 T 22-04-2016 APT61_RS17915 14c2168a8c080058653723cc106e3eaf 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 41.562 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 APT61_RS15155 0763660bba5cd5e1efbb14b6dca286f2 478 PANTHER PTHR10366 259 318 1.6E-169 T 22-04-2016 APT61_RS15155 0763660bba5cd5e1efbb14b6dca286f2 478 Pfam PF13460 NAD(P)H-binding 9 146 7.6E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS15155 0763660bba5cd5e1efbb14b6dca286f2 478 PANTHER PTHR10366:SF439 4 238 1.6E-169 T 22-04-2016 APT61_RS15155 0763660bba5cd5e1efbb14b6dca286f2 478 PANTHER PTHR10366:SF439 259 318 1.6E-169 T 22-04-2016 APT61_RS15155 0763660bba5cd5e1efbb14b6dca286f2 478 SUPERFAMILY SSF51735 3 294 1.87E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS15155 0763660bba5cd5e1efbb14b6dca286f2 478 Gene3D G3DSA:3.40.50.720 3 221 1.2E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS15155 0763660bba5cd5e1efbb14b6dca286f2 478 PANTHER PTHR10366 4 238 1.6E-169 T 22-04-2016 APT61_RS15155 0763660bba5cd5e1efbb14b6dca286f2 478 Pfam PF11066 Protein of unknown function (DUF2867) 333 463 3.1E-12 T 22-04-2016 IPR021295 Protein of unknown function DUF2867 APT61_RS15155 0763660bba5cd5e1efbb14b6dca286f2 478 SUPERFAMILY SSF55961 334 473 3.43E-6 T 22-04-2016 APT61_RS06090 044496b6515132a79bb95ed4b3434be4 84 SUPERFAMILY SSF159871 1 84 2.22E-21 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS06090 044496b6515132a79bb95ed4b3434be4 84 Pfam PF07338 Protein of unknown function (DUF1471) 31 84 1.0E-17 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS06090 044496b6515132a79bb95ed4b3434be4 84 Gene3D G3DSA:3.30.1660.10 18 84 3.9E-23 T 22-04-2016 IPR025543 Dodecin-like APT61_RS06090 044496b6515132a79bb95ed4b3434be4 84 PANTHER PTHR34156 2 84 4.8E-21 T 22-04-2016 APT61_RS12030 f303f4ca4a43aa61ab5cf24a9cdaad88 299 Gene3D G3DSA:1.10.10.10 1 82 1.4E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS12030 f303f4ca4a43aa61ab5cf24a9cdaad88 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.3E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS12030 f303f4ca4a43aa61ab5cf24a9cdaad88 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.3E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS12030 f303f4ca4a43aa61ab5cf24a9cdaad88 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.3E-9 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS12030 f303f4ca4a43aa61ab5cf24a9cdaad88 299 Gene3D G3DSA:3.40.190.10 178 270 6.0E-32 T 22-04-2016 APT61_RS12030 f303f4ca4a43aa61ab5cf24a9cdaad88 299 SUPERFAMILY SSF53850 90 296 3.41E-39 T 22-04-2016 APT61_RS12030 f303f4ca4a43aa61ab5cf24a9cdaad88 299 Pfam PF03466 LysR substrate binding domain 89 294 4.9E-43 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS12030 f303f4ca4a43aa61ab5cf24a9cdaad88 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.1E-22 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS12030 f303f4ca4a43aa61ab5cf24a9cdaad88 299 PANTHER PTHR30346:SF7 1 288 8.9E-125 T 22-04-2016 APT61_RS12030 f303f4ca4a43aa61ab5cf24a9cdaad88 299 PANTHER PTHR30346 1 288 8.9E-125 T 22-04-2016 APT61_RS12030 f303f4ca4a43aa61ab5cf24a9cdaad88 299 Gene3D G3DSA:3.40.190.10 90 177 2.9E-24 T 22-04-2016 APT61_RS12030 f303f4ca4a43aa61ab5cf24a9cdaad88 299 SUPERFAMILY SSF46785 4 88 1.45E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20335 718b5109360ff68e783a74987ecdf424 426 SUPERFAMILY SSF52540 197 372 3.38E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20335 718b5109360ff68e783a74987ecdf424 426 PANTHER PTHR10229 1 424 5.7E-178 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 APT61_RS20335 718b5109360ff68e783a74987ecdf424 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 5.4E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS20335 718b5109360ff68e783a74987ecdf424 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 5.4E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS20335 718b5109360ff68e783a74987ecdf424 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 5.4E-10 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS20335 718b5109360ff68e783a74987ecdf424 426 Gene3D G3DSA:3.40.50.300 197 361 3.9E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20335 718b5109360ff68e783a74987ecdf424 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 1.7E-20 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS20335 718b5109360ff68e783a74987ecdf424 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 46.764 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 APT61_RS20335 718b5109360ff68e783a74987ecdf424 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.5E-28 T 22-04-2016 IPR032305 GTP-binding protein, middle domain APT61_RS20335 718b5109360ff68e783a74987ecdf424 426 PIRSF PIRSF006809 3 420 1.1E-147 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 APT61_RS20335 718b5109360ff68e783a74987ecdf424 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.8E-153 T 22-04-2016 IPR016496 GTPase HflX GO:0005525 APT61_RS20335 718b5109360ff68e783a74987ecdf424 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.5E-30 T 22-04-2016 IPR025121 GTPase HflX, N-terminal APT61_RS20335 718b5109360ff68e783a74987ecdf424 426 SUPERFAMILY SSF54980 365 421 7.05E-14 T 22-04-2016 IPR009022 Elongation factor G, III-V domain APT61_RS20335 718b5109360ff68e783a74987ecdf424 426 PANTHER PTHR10229:SF0 1 424 5.7E-178 T 22-04-2016 APT61_RS15255 1766a914a832f743f17293a72df4abad 107 PANTHER PTHR34068 1 107 4.4E-46 T 22-04-2016 APT61_RS15255 1766a914a832f743f17293a72df4abad 107 Gene3D G3DSA:3.30.110.70 1 104 2.6E-38 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 APT61_RS15255 1766a914a832f743f17293a72df4abad 107 PANTHER PTHR34068:SF1 1 107 4.4E-46 T 22-04-2016 APT61_RS15255 1766a914a832f743f17293a72df4abad 107 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.62 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 APT61_RS15255 1766a914a832f743f17293a72df4abad 107 Pfam PF01906 Putative heavy-metal-binding 1 104 7.0E-40 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 APT61_RS15255 1766a914a832f743f17293a72df4abad 107 SUPERFAMILY SSF117782 1 106 2.35E-37 T 22-04-2016 IPR002765 Uncharacterised protein family UPF0145 APT61_RS20455 7adb1c3989100d9a3b75e4c826d93dda 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 7.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS20455 7adb1c3989100d9a3b75e4c826d93dda 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 7.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS20455 7adb1c3989100d9a3b75e4c826d93dda 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 7.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS20455 7adb1c3989100d9a3b75e4c826d93dda 195 SUPERFAMILY SSF46894 122 188 2.07E-13 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS20455 7adb1c3989100d9a3b75e4c826d93dda 195 ProSitePatterns PS00622 LuxR-type HTH domain signature. 154 181 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS20455 7adb1c3989100d9a3b75e4c826d93dda 195 Gene3D G3DSA:3.40.50.2300 2 130 1.8E-4 T 22-04-2016 APT61_RS20455 7adb1c3989100d9a3b75e4c826d93dda 195 SMART SM00421 137 194 9.0E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS20455 7adb1c3989100d9a3b75e4c826d93dda 195 Gene3D G3DSA:1.10.10.10 132 187 2.1E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20455 7adb1c3989100d9a3b75e4c826d93dda 195 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 184 2.9E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS20455 7adb1c3989100d9a3b75e4c826d93dda 195 SUPERFAMILY SSF52172 1 128 1.51E-5 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS12135 e7783dde02aec444e8b4dc984f5c52dc 317 SUPERFAMILY SSF159871 241 317 9.29E-19 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS12135 e7783dde02aec444e8b4dc984f5c52dc 317 Pfam PF07338 Protein of unknown function (DUF1471) 262 317 6.1E-20 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS12135 e7783dde02aec444e8b4dc984f5c52dc 317 Pfam PF07338 Protein of unknown function (DUF1471) 118 174 2.2E-17 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS12135 e7783dde02aec444e8b4dc984f5c52dc 317 Pfam PF07338 Protein of unknown function (DUF1471) 35 90 2.0E-11 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS12135 e7783dde02aec444e8b4dc984f5c52dc 317 Gene3D G3DSA:3.30.1660.10 109 175 1.7E-24 T 22-04-2016 IPR025543 Dodecin-like APT61_RS12135 e7783dde02aec444e8b4dc984f5c52dc 317 Gene3D G3DSA:3.30.1660.10 25 90 3.8E-17 T 22-04-2016 IPR025543 Dodecin-like APT61_RS12135 e7783dde02aec444e8b4dc984f5c52dc 317 Gene3D G3DSA:3.30.1660.10 252 317 1.7E-23 T 22-04-2016 IPR025543 Dodecin-like APT61_RS12135 e7783dde02aec444e8b4dc984f5c52dc 317 SUPERFAMILY SSF159871 4 94 3.4E-16 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS12135 e7783dde02aec444e8b4dc984f5c52dc 317 PANTHER PTHR34156:SF2 2 317 4.2E-217 T 22-04-2016 APT61_RS12135 e7783dde02aec444e8b4dc984f5c52dc 317 SUPERFAMILY SSF159871 108 177 2.75E-16 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS12135 e7783dde02aec444e8b4dc984f5c52dc 317 PANTHER PTHR34156 2 317 4.2E-217 T 22-04-2016 APT61_RS18150 7245a54a2841e2c0be82171b59e2e76d 181 SMART SM01322 1 176 2.8E-108 T 22-04-2016 IPR009822 YaeQ APT61_RS18150 7245a54a2841e2c0be82171b59e2e76d 181 Pfam PF07152 YaeQ protein 1 173 2.7E-71 T 22-04-2016 IPR009822 YaeQ APT61_RS18150 7245a54a2841e2c0be82171b59e2e76d 181 PIRSF PIRSF011484 1 181 7.1E-66 T 22-04-2016 IPR009822 YaeQ APT61_RS18150 7245a54a2841e2c0be82171b59e2e76d 181 PANTHER PTHR38784 1 181 9.6E-96 T 22-04-2016 APT61_RS18150 7245a54a2841e2c0be82171b59e2e76d 181 SUPERFAMILY SSF52980 4 179 3.22E-68 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APT61_RS18150 7245a54a2841e2c0be82171b59e2e76d 181 Gene3D G3DSA:3.10.640.10 1 179 5.2E-80 T 22-04-2016 APT61_RS18150 7245a54a2841e2c0be82171b59e2e76d 181 PANTHER PTHR38784:SF1 1 181 9.6E-96 T 22-04-2016 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 2.7E-269 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.9E-22 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 Gene3D G3DSA:3.50.30.10 133 255 2.0E-41 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 SUPERFAMILY SSF51621 249 549 5.5E-110 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 Gene3D G3DSA:1.10.274.10 23 132 9.3E-39 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 Gene3D G3DSA:3.20.20.60 256 572 1.3E-115 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 SUPERFAMILY SSF52009 125 245 1.22E-36 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 SUPERFAMILY SSF47831 23 143 1.7E-33 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 3.46E-31 T 22-04-2016 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 3.46E-31 T 22-04-2016 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 3.46E-31 T 22-04-2016 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 3.46E-31 T 22-04-2016 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 PIRSF PIRSF000732 1 574 2.2E-217 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 8.4E-30 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 1.6E-126 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APT61_RS06340 e6517ebab2d3451ab9fed3b4ecc1eb6d 575 PANTHER PTHR22931 66 550 4.6E-221 T 22-04-2016 APT61_RS18445 f3f0a498f4576de677442547e7522d0f 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 1 115 5.0E-59 T 22-04-2016 APT61_RS18445 f3f0a498f4576de677442547e7522d0f 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 23 106 1.3E-8 T 22-04-2016 IPR019114 Chaperone lipoprotein, PulS/OutS-like APT61_RS19390 8173975059caa515bad925918b772e70 216 Gene3D G3DSA:3.40.50.300 4 210 7.7E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19390 8173975059caa515bad925918b772e70 216 SUPERFAMILY SSF52540 13 210 4.91E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19390 8173975059caa515bad925918b772e70 216 PANTHER PTHR24220 3 214 4.3E-54 T 22-04-2016 APT61_RS19390 8173975059caa515bad925918b772e70 216 PANTHER PTHR24220:SF117 3 214 4.3E-54 T 22-04-2016 APT61_RS19390 8173975059caa515bad925918b772e70 216 SMART SM00382 30 207 1.7E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS19390 8173975059caa515bad925918b772e70 216 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS19390 8173975059caa515bad925918b772e70 216 Pfam PF00005 ABC transporter 21 152 2.0E-14 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS07115 cafe10134b2d91c619f88ed3ddf923f6 398 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 390 5.5E-154 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 APT61_RS07115 cafe10134b2d91c619f88ed3ddf923f6 398 Pfam PF07690 Major Facilitator Superfamily 16 358 1.0E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS07115 cafe10134b2d91c619f88ed3ddf923f6 398 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 52 188 3.2E-39 T 22-04-2016 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 APT61_RS07115 cafe10134b2d91c619f88ed3ddf923f6 398 PANTHER PTHR23502 11 379 3.8E-206 T 22-04-2016 APT61_RS07115 cafe10134b2d91c619f88ed3ddf923f6 398 Gene3D G3DSA:1.20.1250.20 211 393 1.6E-12 T 22-04-2016 APT61_RS07115 cafe10134b2d91c619f88ed3ddf923f6 398 Gene3D G3DSA:1.20.1250.20 12 194 5.9E-33 T 22-04-2016 APT61_RS07115 cafe10134b2d91c619f88ed3ddf923f6 398 PANTHER PTHR23502:SF39 11 379 3.8E-206 T 22-04-2016 APT61_RS07115 cafe10134b2d91c619f88ed3ddf923f6 398 SUPERFAMILY SSF103473 9 395 9.02E-70 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS04225 9e2c7c35a5b5ca9a31969f42bd0fe2a9 245 SMART SM00257 37 81 5.4E-17 T 22-04-2016 IPR018392 LysM domain APT61_RS04225 9e2c7c35a5b5ca9a31969f42bd0fe2a9 245 SUPERFAMILY SSF51261 37 236 2.72E-47 T 22-04-2016 IPR011055 Duplicated hybrid motif APT61_RS04225 9e2c7c35a5b5ca9a31969f42bd0fe2a9 245 Pfam PF01551 Peptidase family M23 139 232 5.5E-31 T 22-04-2016 IPR016047 Peptidase M23 APT61_RS04225 9e2c7c35a5b5ca9a31969f42bd0fe2a9 245 PANTHER PTHR21666:SF222 88 240 3.1E-94 T 22-04-2016 APT61_RS04225 9e2c7c35a5b5ca9a31969f42bd0fe2a9 245 Gene3D G3DSA:2.70.70.10 108 237 2.2E-39 T 22-04-2016 APT61_RS04225 9e2c7c35a5b5ca9a31969f42bd0fe2a9 245 Pfam PF01476 LysM domain 38 80 5.5E-15 T 22-04-2016 IPR018392 LysM domain APT61_RS04225 9e2c7c35a5b5ca9a31969f42bd0fe2a9 245 Gene3D G3DSA:3.10.350.10 37 81 1.6E-18 T 22-04-2016 IPR018392 LysM domain APT61_RS04225 9e2c7c35a5b5ca9a31969f42bd0fe2a9 245 PANTHER PTHR21666 88 240 3.1E-94 T 22-04-2016 APT61_RS08370 26626ea11c8d9551a6b0d6f8f2691edc 504 Pfam PF00005 ABC transporter 23 172 2.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS08370 26626ea11c8d9551a6b0d6f8f2691edc 504 Pfam PF00005 ABC transporter 275 427 6.5E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS08370 26626ea11c8d9551a6b0d6f8f2691edc 504 SUPERFAMILY SSF52540 6 236 1.51E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08370 26626ea11c8d9551a6b0d6f8f2691edc 504 Gene3D G3DSA:3.40.50.300 3 234 2.3E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08370 26626ea11c8d9551a6b0d6f8f2691edc 504 PANTHER PTHR24220 9 381 1.2E-222 T 22-04-2016 APT61_RS08370 26626ea11c8d9551a6b0d6f8f2691edc 504 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS08370 26626ea11c8d9551a6b0d6f8f2691edc 504 SUPERFAMILY SSF52540 274 485 5.42E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08370 26626ea11c8d9551a6b0d6f8f2691edc 504 Gene3D G3DSA:3.40.50.300 274 491 1.8E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08370 26626ea11c8d9551a6b0d6f8f2691edc 504 PANTHER PTHR24220:SF516 9 381 1.2E-222 T 22-04-2016 APT61_RS08370 26626ea11c8d9551a6b0d6f8f2691edc 504 SMART SM00382 32 220 3.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS08370 26626ea11c8d9551a6b0d6f8f2691edc 504 SMART SM00382 281 476 9.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 SUPERFAMILY SSF46785 552 607 8.17E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 Gene3D G3DSA:1.10.10.10 416 481 1.9E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.3E-7 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.3E-7 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.3E-7 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.3E-7 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 SUPERFAMILY SSF46785 488 546 9.08E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 SUPERFAMILY SSF46785 417 484 1.14E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 PANTHER PTHR23115:SF129 1 351 5.0E-137 T 22-04-2016 APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 Gene3D G3DSA:3.40.50.300 3 161 3.0E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 PANTHER PTHR23115 1 351 5.0E-137 T 22-04-2016 APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 SUPERFAMILY SSF52540 2 164 7.89E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 Pfam PF09106 Elongation factor SelB, winged helix 424 480 7.3E-16 T 22-04-2016 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 Pfam PF09107 Elongation factor SelB, winged helix 560 605 2.4E-17 T 22-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 Gene3D G3DSA:1.10.10.10 549 607 1.1E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 Gene3D G3DSA:2.40.30.10 174 296 5.6E-26 T 22-04-2016 APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 Pfam PF03144 Elongation factor Tu domain 2 189 256 3.8E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 607 2.6E-249 T 22-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 SUPERFAMILY SSF50447 175 293 3.53E-24 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 Pfam PF00009 Elongation factor Tu GTP binding domain 2 160 2.3E-31 T 22-04-2016 APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 SUPERFAMILY SSF50465 273 351 6.12E-7 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal APT61_RS21485 105fd8f182e21a2ad1c502059367cfad 618 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site APT61_RS08645 59c63cdfc457e4a42fa3e2d2cb35691d 216 Gene3D G3DSA:1.10.3680.10 63 208 1.0E-15 T 22-04-2016 IPR029024 TerB-like APT61_RS08645 59c63cdfc457e4a42fa3e2d2cb35691d 216 Pfam PF04391 Protein of unknown function (DUF533) 27 207 8.2E-50 T 22-04-2016 IPR007486 Inner membrane protein YebE APT61_RS08645 59c63cdfc457e4a42fa3e2d2cb35691d 216 SUPERFAMILY SSF158682 72 209 8.76E-19 T 22-04-2016 IPR029024 TerB-like APT61_RS04695 7f7bd3661b254b2119901fa676c4d488 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 59.401 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 APT61_RS04695 7f7bd3661b254b2119901fa676c4d488 302 SUPERFAMILY SSF52402 6 209 1.85E-75 T 22-04-2016 APT61_RS04695 7f7bd3661b254b2119901fa676c4d488 302 PANTHER PTHR23293 245 302 2.5E-98 T 22-04-2016 APT61_RS04695 7f7bd3661b254b2119901fa676c4d488 302 PANTHER PTHR23293 178 211 2.5E-98 T 22-04-2016 APT61_RS04695 7f7bd3661b254b2119901fa676c4d488 302 PANTHER PTHR23293 1 158 2.5E-98 T 22-04-2016 APT61_RS04695 7f7bd3661b254b2119901fa676c4d488 302 PIRSF PIRSF002936 1 302 7.1E-156 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 APT61_RS04695 7f7bd3661b254b2119901fa676c4d488 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 5.2E-168 T 22-04-2016 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|UniPathway: UPA00140 APT61_RS04695 7f7bd3661b254b2119901fa676c4d488 302 Gene3D G3DSA:3.40.50.620 244 253 1.2E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS04695 7f7bd3661b254b2119901fa676c4d488 302 Gene3D G3DSA:3.40.50.620 2 210 1.2E-63 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS04695 7f7bd3661b254b2119901fa676c4d488 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 9.6E-66 T 22-04-2016 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 APT61_RS15955 77087226e361dac895d34c05dac97f5a 250 SUPERFAMILY SSF53254 4 247 6.48E-78 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APT61_RS15955 77087226e361dac895d34c05dac97f5a 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 APT61_RS15955 77087226e361dac895d34c05dac97f5a 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.579 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APT61_RS15955 77087226e361dac895d34c05dac97f5a 250 PANTHER PTHR11931 1 250 2.0E-171 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APT61_RS15955 77087226e361dac895d34c05dac97f5a 250 SMART SM00855 5 191 6.2E-27 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APT61_RS15955 77087226e361dac895d34c05dac97f5a 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 5.4E-128 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 APT61_RS15955 77087226e361dac895d34c05dac97f5a 250 Gene3D G3DSA:3.40.50.1240 2 250 9.5E-99 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APT61_RS15955 77087226e361dac895d34c05dac97f5a 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 4.3E-30 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APT61_RS15955 77087226e361dac895d34c05dac97f5a 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 131 221 7.8E-5 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APT61_RS02930 e852c9b7314d6e954d8459b142b5f48c 444 PANTHER PTHR11662:SF18 4 444 1.1E-229 T 22-04-2016 APT61_RS02930 e852c9b7314d6e954d8459b142b5f48c 444 SUPERFAMILY SSF103473 6 442 1.44E-79 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS02930 e852c9b7314d6e954d8459b142b5f48c 444 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 25 434 3.7E-139 T 22-04-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 APT61_RS02930 e852c9b7314d6e954d8459b142b5f48c 444 Gene3D G3DSA:1.20.1250.20 15 214 2.9E-44 T 22-04-2016 APT61_RS02930 e852c9b7314d6e954d8459b142b5f48c 444 PANTHER PTHR11662 4 444 1.1E-229 T 22-04-2016 APT61_RS02930 e852c9b7314d6e954d8459b142b5f48c 444 Gene3D G3DSA:1.20.1250.20 243 440 5.4E-36 T 22-04-2016 APT61_RS02930 e852c9b7314d6e954d8459b142b5f48c 444 PIRSF PIRSF002808 3 444 8.0E-35 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APT61_RS02930 e852c9b7314d6e954d8459b142b5f48c 444 Pfam PF07690 Major Facilitator Superfamily 23 316 5.7E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS20110 6a2114be0350f8cb4615f4252384aede 185 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 6.1E-88 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ APT61_RS20110 6a2114be0350f8cb4615f4252384aede 185 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 25 181 3.2E-74 T 22-04-2016 IPR006513 Conserved hypothetical protein CHP01626, YtfJ APT61_RS18795 d20f503792026976bb793047213ae908 169 PANTHER PTHR33795 5 169 1.9E-36 T 22-04-2016 APT61_RS18795 d20f503792026976bb793047213ae908 169 Pfam PF13518 Helix-turn-helix domain 68 114 3.9E-9 T 22-04-2016 APT61_RS18795 d20f503792026976bb793047213ae908 169 Pfam PF13518 Helix-turn-helix domain 10 59 5.4E-11 T 22-04-2016 APT61_RS18795 d20f503792026976bb793047213ae908 169 Gene3D G3DSA:1.10.10.10 4 57 5.0E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18795 d20f503792026976bb793047213ae908 169 Gene3D G3DSA:1.10.10.60 65 166 7.2E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS18795 d20f503792026976bb793047213ae908 169 PANTHER PTHR33795:SF1 5 169 1.9E-36 T 22-04-2016 APT61_RS18795 d20f503792026976bb793047213ae908 169 SUPERFAMILY SSF48295 63 121 1.05E-12 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APT61_RS18795 d20f503792026976bb793047213ae908 169 SUPERFAMILY SSF48295 2 60 3.66E-13 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APT61_RS00965 24c1440f0a37086a05edc147538cb6e8 67 Pfam PF13627 Prokaryotic lipoprotein-attachment site 7 29 1.4E-9 T 22-04-2016 IPR032831 Prokaryotic lipoprotein-attachment site APT61_RS06805 1253a0d071dfa30d4575f2198d8edf9e 219 Gene3D G3DSA:1.10.150.240 19 59 3.2E-4 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APT61_RS06805 1253a0d071dfa30d4575f2198d8edf9e 219 PANTHER PTHR18901:SF20 1 219 3.1E-126 T 22-04-2016 APT61_RS06805 1253a0d071dfa30d4575f2198d8edf9e 219 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 181 1.8E-26 T 22-04-2016 IPR023214 HAD-like domain APT61_RS06805 1253a0d071dfa30d4575f2198d8edf9e 219 SUPERFAMILY SSF56784 4 202 1.27E-45 T 22-04-2016 IPR023214 HAD-like domain APT61_RS06805 1253a0d071dfa30d4575f2198d8edf9e 219 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 53 175 4.2E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS06805 1253a0d071dfa30d4575f2198d8edf9e 219 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 72 181 3.0E-16 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS06805 1253a0d071dfa30d4575f2198d8edf9e 219 PANTHER PTHR18901 1 219 3.1E-126 T 22-04-2016 APT61_RS06805 1253a0d071dfa30d4575f2198d8edf9e 219 Gene3D G3DSA:3.40.50.1000 61 209 3.5E-50 T 22-04-2016 IPR023214 HAD-like domain APT61_RS06805 1253a0d071dfa30d4575f2198d8edf9e 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 7.6E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS06805 1253a0d071dfa30d4575f2198d8edf9e 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 7.6E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS06805 1253a0d071dfa30d4575f2198d8edf9e 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 95 108 7.6E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS06805 1253a0d071dfa30d4575f2198d8edf9e 219 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 7.6E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS03840 1da727402ac2dcb15d1f452e8f7700aa 325 Gene3D G3DSA:3.40.50.300 7 258 2.8E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03840 1da727402ac2dcb15d1f452e8f7700aa 325 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 322 4.5E-25 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS03840 1da727402ac2dcb15d1f452e8f7700aa 325 SUPERFAMILY SSF52540 8 256 1.56E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03840 1da727402ac2dcb15d1f452e8f7700aa 325 SMART SM00382 43 234 8.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS03840 1da727402ac2dcb15d1f452e8f7700aa 325 Pfam PF00005 ABC transporter 35 184 1.2E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS03840 1da727402ac2dcb15d1f452e8f7700aa 325 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 302 7.8E-16 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 APT61_RS03840 1da727402ac2dcb15d1f452e8f7700aa 325 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS07670 21320e1151b17456724f2c801b817e97 279 TIGRFAM TIGR04017 WcaA: colanic acid biosynthesis glycosyltransferase WcaA 2 279 6.6E-191 T 22-04-2016 IPR024009 Colanic acid biosynthesis, glycosyl transferase, WcaA UniPathway: UPA00936 APT61_RS07670 21320e1151b17456724f2c801b817e97 279 PANTHER PTHR22916:SF3 1 274 8.2E-41 T 22-04-2016 APT61_RS07670 21320e1151b17456724f2c801b817e97 279 Pfam PF00535 Glycosyl transferase family 2 8 137 1.9E-26 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APT61_RS07670 21320e1151b17456724f2c801b817e97 279 PANTHER PTHR22916 1 274 8.2E-41 T 22-04-2016 APT61_RS07670 21320e1151b17456724f2c801b817e97 279 SUPERFAMILY SSF53448 5 233 9.38E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS07670 21320e1151b17456724f2c801b817e97 279 Gene3D G3DSA:3.90.550.10 5 239 4.4E-39 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 PANTHER PTHR10357:SF142 451 531 2.4E-249 T 22-04-2016 APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 PANTHER PTHR10357:SF142 5 386 2.4E-249 T 22-04-2016 APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 PANTHER PTHR10357:SF142 407 419 2.4E-249 T 22-04-2016 APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 548 1.5E-260 T 22-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 Pfam PF00128 Alpha amylase, catalytic domain 30 372 2.6E-124 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 SUPERFAMILY SSF51445 5 472 3.2E-152 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 SMART SM00642 15 414 3.2E-152 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 Pfam PF11941 Domain of unknown function (DUF3459) 459 548 1.6E-8 T 22-04-2016 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 Gene3D G3DSA:3.20.20.80 176 473 1.6E-122 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 Gene3D G3DSA:3.20.20.80 5 106 1.6E-122 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 Gene3D G3DSA:2.60.40.1180 476 549 9.0E-20 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 SUPERFAMILY SSF51011 475 549 2.0E-17 T 22-04-2016 APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 PANTHER PTHR10357 451 531 2.4E-249 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 PANTHER PTHR10357 5 386 2.4E-249 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 PANTHER PTHR10357 407 419 2.4E-249 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS19945 9b0ca909cb54f9b58f3cbaa4e005a0ed 551 Gene3D G3DSA:3.90.400.10 107 175 3.1E-30 T 22-04-2016 APT61_RS01290 df9ba34ae58d61485375e72d750cbfa1 145 Pfam PF00582 Universal stress protein family 3 138 6.7E-21 T 22-04-2016 IPR006016 UspA GO:0006950 APT61_RS01290 df9ba34ae58d61485375e72d750cbfa1 145 PIRSF PIRSF006276 1 141 2.5E-54 T 22-04-2016 IPR006015 Universal stress protein A APT61_RS01290 df9ba34ae58d61485375e72d750cbfa1 145 Gene3D G3DSA:3.40.50.620 3 139 6.4E-32 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS01290 df9ba34ae58d61485375e72d750cbfa1 145 SUPERFAMILY SSF52402 3 139 1.42E-32 T 22-04-2016 APT61_RS18245 e9d6c1c062c4cc01b27bce7de83e722c 185 SUPERFAMILY SSF55194 2 184 3.01E-71 T 22-04-2016 IPR023584 Ribosome recycling factor domain APT61_RS18245 e9d6c1c062c4cc01b27bce7de83e722c 185 PANTHER PTHR20982 1 185 1.7E-83 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APT61_RS18245 e9d6c1c062c4cc01b27bce7de83e722c 185 Gene3D G3DSA:1.10.132.20 67 184 6.6E-44 T 22-04-2016 IPR023584 Ribosome recycling factor domain APT61_RS18245 e9d6c1c062c4cc01b27bce7de83e722c 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 2.1E-80 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APT61_RS18245 e9d6c1c062c4cc01b27bce7de83e722c 185 Pfam PF01765 Ribosome recycling factor 20 183 3.5E-62 T 22-04-2016 IPR023584 Ribosome recycling factor domain APT61_RS18245 e9d6c1c062c4cc01b27bce7de83e722c 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.297 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 APT61_RS08450 73ffaee933d2359fbeb350f0d81a8c94 321 SMART SM00972 255 318 6.8E-17 T 22-04-2016 IPR007893 Spore coat protein U APT61_RS08450 73ffaee933d2359fbeb350f0d81a8c94 321 Pfam PF05229 Spore Coat Protein U domain 184 317 4.4E-28 T 22-04-2016 IPR007893 Spore coat protein U APT61_RS08450 73ffaee933d2359fbeb350f0d81a8c94 321 Pfam PF05229 Spore Coat Protein U domain 11 157 2.2E-8 T 22-04-2016 IPR007893 Spore coat protein U APT61_RS04240 ab3a3925deb23166bcf87225a367d173 76 Pfam PF06902 Divergent 4Fe-4S mono-cluster 13 76 1.2E-27 T 22-04-2016 IPR010693 Divergent 4Fe-4S mono-cluster APT61_RS10500 e0e2dc3b57ff0d448ffe4e4969f1855f 372 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APT61_RS10500 e0e2dc3b57ff0d448ffe4e4969f1855f 372 SMART SM00829 12 367 0.0021 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APT61_RS10500 e0e2dc3b57ff0d448ffe4e4969f1855f 372 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 2.9E-222 T 22-04-2016 IPR014183 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00040+1.1.1.-|KEGG: 00051+1.1.1.-|KEGG: 00071+1.1.1.1|KEGG: 00140+1.1.1.-|KEGG: 00240+1.1.1.-|KEGG: 00253+1.1.1.-|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00362+1.1.1.-|KEGG: 00363+1.1.1.-|KEGG: 00365+1.1.1.-|KEGG: 00400+1.1.1.-|KEGG: 00520+1.1.1.-|KEGG: 00523+1.1.1.-|KEGG: 00591+1.1.1.-|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00622+1.1.1.-|KEGG: 00625+1.1.1.1+1.1.1.-|KEGG: 00626+1.1.1.1|KEGG: 00633+1.1.1.-|KEGG: 00640+1.1.1.-|KEGG: 00650+1.1.1.-|KEGG: 00680+1.1.1.284+1.1.1.-|KEGG: 00720+1.1.1.-|KEGG: 00750+1.1.1.-|KEGG: 00830+1.1.1.1+1.1.1.-|KEGG: 00950+1.1.1.-|KEGG: 00966+1.1.1.-|KEGG: 00980+1.1.1.1|KEGG: 00981+1.1.1.-|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 APT61_RS10500 e0e2dc3b57ff0d448ffe4e4969f1855f 372 Gene3D G3DSA:3.90.180.10 2 190 1.2E-69 T 22-04-2016 IPR011032 GroES-like APT61_RS10500 e0e2dc3b57ff0d448ffe4e4969f1855f 372 PANTHER PTHR11695:SF560 128 372 4.2E-219 T 22-04-2016 APT61_RS10500 e0e2dc3b57ff0d448ffe4e4969f1855f 372 PANTHER PTHR11695:SF560 15 108 4.2E-219 T 22-04-2016 APT61_RS10500 e0e2dc3b57ff0d448ffe4e4969f1855f 372 Gene3D G3DSA:3.40.50.720 191 309 2.1E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10500 e0e2dc3b57ff0d448ffe4e4969f1855f 372 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 151 3.8E-25 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APT61_RS10500 e0e2dc3b57ff0d448ffe4e4969f1855f 372 Pfam PF00107 Zinc-binding dehydrogenase 197 329 3.5E-24 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APT61_RS10500 e0e2dc3b57ff0d448ffe4e4969f1855f 372 SUPERFAMILY SSF50129 318 369 1.79E-12 T 22-04-2016 IPR011032 GroES-like APT61_RS10500 e0e2dc3b57ff0d448ffe4e4969f1855f 372 PANTHER PTHR11695 128 372 4.2E-219 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS10500 e0e2dc3b57ff0d448ffe4e4969f1855f 372 PANTHER PTHR11695 15 108 4.2E-219 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS10500 e0e2dc3b57ff0d448ffe4e4969f1855f 372 SUPERFAMILY SSF51735 160 334 4.38E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10500 e0e2dc3b57ff0d448ffe4e4969f1855f 372 SUPERFAMILY SSF50129 1 186 5.63E-72 T 22-04-2016 IPR011032 GroES-like APT61_RS06675 8683b47fcbc19fe1517d092e142162a0 378 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT61_RS06675 8683b47fcbc19fe1517d092e142162a0 378 PANTHER PTHR10996 1 330 1.9E-186 T 22-04-2016 APT61_RS06675 8683b47fcbc19fe1517d092e142162a0 378 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 8.8E-30 T 22-04-2016 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 APT61_RS06675 8683b47fcbc19fe1517d092e142162a0 378 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 280 2.8E-18 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APT61_RS06675 8683b47fcbc19fe1517d092e142162a0 378 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 243 3.1E-30 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APT61_RS06675 8683b47fcbc19fe1517d092e142162a0 378 SUPERFAMILY SSF51735 91 243 8.26E-33 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06675 8683b47fcbc19fe1517d092e142162a0 378 Gene3D G3DSA:3.40.50.720 2 101 2.3E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS06675 8683b47fcbc19fe1517d092e142162a0 378 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APT61_RS06675 8683b47fcbc19fe1517d092e142162a0 378 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 47.43 T 22-04-2016 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181|UniPathway: UPA00244 APT61_RS06675 8683b47fcbc19fe1517d092e142162a0 378 PANTHER PTHR10996:SF111 1 330 1.9E-186 T 22-04-2016 APT61_RS06675 8683b47fcbc19fe1517d092e142162a0 378 SUPERFAMILY SSF52283 4 109 8.08E-18 T 22-04-2016 APT61_RS06675 8683b47fcbc19fe1517d092e142162a0 378 Gene3D G3DSA:3.40.50.720 102 258 1.1E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS04760 b5063157243574276113fe66360b0a79 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 850 0.0 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APT61_RS04760 b5063157243574276113fe66360b0a79 853 Gene3D G3DSA:1.10.1420.10 318 477 1.4E-54 T 22-04-2016 APT61_RS04760 b5063157243574276113fe66360b0a79 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APT61_RS04760 b5063157243574276113fe66360b0a79 853 SMART SM00533 286 591 3.2E-104 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APT61_RS04760 b5063157243574276113fe66360b0a79 853 Gene3D G3DSA:3.30.420.110 129 258 3.8E-43 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APT61_RS04760 b5063157243574276113fe66360b0a79 853 Pfam PF00488 MutS domain V 610 797 1.2E-87 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APT61_RS04760 b5063157243574276113fe66360b0a79 853 SUPERFAMILY SSF55271 5 116 4.58E-43 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APT61_RS04760 b5063157243574276113fe66360b0a79 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 845 25.371 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 APT61_RS04760 b5063157243574276113fe66360b0a79 853 SUPERFAMILY SSF48334 270 566 3.14E-90 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APT61_RS04760 b5063157243574276113fe66360b0a79 853 SUPERFAMILY SSF52540 567 798 1.05E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04760 b5063157243574276113fe66360b0a79 853 PANTHER PTHR11361:SF86 1 852 0.0 T 22-04-2016 APT61_RS04760 b5063157243574276113fe66360b0a79 853 Gene3D G3DSA:3.40.50.300 567 797 1.6E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04760 b5063157243574276113fe66360b0a79 853 Pfam PF01624 MutS domain I 11 122 4.9E-43 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 APT61_RS04760 b5063157243574276113fe66360b0a79 853 SMART SM00534 607 794 3.7E-122 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 APT61_RS04760 b5063157243574276113fe66360b0a79 853 PANTHER PTHR11361 1 852 0.0 T 22-04-2016 APT61_RS04760 b5063157243574276113fe66360b0a79 853 Gene3D G3DSA:3.40.1170.10 4 123 1.7E-52 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 APT61_RS04760 b5063157243574276113fe66360b0a79 853 SUPERFAMILY SSF53150 117 269 4.58E-43 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APT61_RS04760 b5063157243574276113fe66360b0a79 853 Pfam PF05190 MutS family domain IV 428 517 1.6E-28 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 APT61_RS04760 b5063157243574276113fe66360b0a79 853 Pfam PF05192 MutS domain III 272 559 8.3E-40 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 APT61_RS04760 b5063157243574276113fe66360b0a79 853 Pfam PF05188 MutS domain II 131 256 4.1E-33 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 PANTHER PTHR33303 456 695 6.8E-239 T 22-04-2016 APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 PANTHER PTHR33303 6 426 6.8E-239 T 22-04-2016 APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 1.3E-46 T 22-04-2016 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 Gene3D G3DSA:3.40.50.720 1 128 3.9E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 Pfam PF13380 CoA binding domain 13 129 1.6E-19 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 SUPERFAMILY SSF55729 707 866 4.69E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 PANTHER PTHR33303:SF3 456 695 6.8E-239 T 22-04-2016 APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 PANTHER PTHR33303:SF3 6 426 6.8E-239 T 22-04-2016 APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 SUPERFAMILY SSF52210 125 286 7.06E-36 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 Pfam PF13549 ATP-grasp domain 473 694 6.0E-74 T 22-04-2016 APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 SUPERFAMILY SSF52210 287 447 1.44E-37 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 SUPERFAMILY SSF56059 481 691 1.67E-27 T 22-04-2016 APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 Pfam PF00583 Acetyltransferase (GNAT) family 789 864 1.4E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 SUPERFAMILY SSF51735 2 136 3.4E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 SMART SM00881 9 104 3.1E-21 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 Gene3D G3DSA:3.40.50.261 129 279 3.0E-23 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 Gene3D G3DSA:3.40.630.30 718 877 2.7E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS05720 6bc16ffa5875e7d33643be56a0428dcb 887 Gene3D G3DSA:3.40.50.261 280 439 8.4E-15 T 22-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS17025 7cbf212d7ca3b073b23e3943fb0ce516 228 PANTHER PTHR24220:SF509 8 227 4.6E-116 T 22-04-2016 APT61_RS17025 7cbf212d7ca3b073b23e3943fb0ce516 228 Gene3D G3DSA:3.40.50.300 5 227 1.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17025 7cbf212d7ca3b073b23e3943fb0ce516 228 Pfam PF00005 ABC transporter 27 174 1.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS17025 7cbf212d7ca3b073b23e3943fb0ce516 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS17025 7cbf212d7ca3b073b23e3943fb0ce516 228 SUPERFAMILY SSF52540 6 226 5.44E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17025 7cbf212d7ca3b073b23e3943fb0ce516 228 PANTHER PTHR24220 8 227 4.6E-116 T 22-04-2016 APT61_RS17025 7cbf212d7ca3b073b23e3943fb0ce516 228 SMART SM00382 35 223 6.8E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS04170 5aac40f51d8539e01f4687a5a2e02447 219 PANTHER PTHR20855:SF3 15 216 6.6E-72 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 APT61_RS04170 5aac40f51d8539e01f4687a5a2e02447 219 Pfam PF03006 Haemolysin-III related 12 209 6.1E-37 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 APT61_RS04170 5aac40f51d8539e01f4687a5a2e02447 219 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 216 4.5E-72 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 APT61_RS04170 5aac40f51d8539e01f4687a5a2e02447 219 PANTHER PTHR20855 15 216 6.6E-72 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 APT61_RS02170 72319eddf55cd58cf0cfa6b440c5527e 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.7E-55 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02170 72319eddf55cd58cf0cfa6b440c5527e 129 PANTHER PTHR11759 11 129 1.1E-73 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APT61_RS02170 72319eddf55cd58cf0cfa6b440c5527e 129 PIRSF PIRSF002131 1 129 8.3E-53 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APT61_RS02170 72319eddf55cd58cf0cfa6b440c5527e 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.65 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APT61_RS02170 72319eddf55cd58cf0cfa6b440c5527e 129 Gene3D G3DSA:3.30.420.80 9 129 1.8E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APT61_RS02170 72319eddf55cd58cf0cfa6b440c5527e 129 SUPERFAMILY SSF53137 14 129 7.19E-48 T 22-04-2016 APT61_RS02170 72319eddf55cd58cf0cfa6b440c5527e 129 Pfam PF00411 Ribosomal protein S11 19 128 3.3E-54 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 APT61_RS02170 72319eddf55cd58cf0cfa6b440c5527e 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site APT61_RS15445 149a1c2c80b415afe03e0f010acba94b 401 SUPERFAMILY SSF69189 286 379 4.9E-25 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS15445 149a1c2c80b415afe03e0f010acba94b 401 PANTHER PTHR21581 1 401 7.1E-298 T 22-04-2016 APT61_RS15445 149a1c2c80b415afe03e0f010acba94b 401 Gene3D G3DSA:3.40.710.10 31 285 1.9E-98 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS15445 149a1c2c80b415afe03e0f010acba94b 401 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 266 2.4E-100 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APT61_RS15445 149a1c2c80b415afe03e0f010acba94b 401 PANTHER PTHR21581:SF4 1 401 7.1E-298 T 22-04-2016 APT61_RS15445 149a1c2c80b415afe03e0f010acba94b 401 SUPERFAMILY SSF56601 15 286 1.7E-84 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS15445 149a1c2c80b415afe03e0f010acba94b 401 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 286 377 1.5E-24 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS15445 149a1c2c80b415afe03e0f010acba94b 401 SMART SM00936 286 377 7.3E-35 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS15445 149a1c2c80b415afe03e0f010acba94b 401 Gene3D G3DSA:2.60.410.10 286 377 1.0E-30 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS15445 149a1c2c80b415afe03e0f010acba94b 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 125 142 2.9E-18 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APT61_RS15445 149a1c2c80b415afe03e0f010acba94b 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 2.9E-18 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APT61_RS15445 149a1c2c80b415afe03e0f010acba94b 401 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 152 165 2.9E-18 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APT61_RS18735 dcda024bdc92d00608a72c99eb5f1675 317 PANTHER PTHR30537:SF1 1 313 2.8E-103 T 22-04-2016 APT61_RS18735 dcda024bdc92d00608a72c99eb5f1675 317 SUPERFAMILY SSF46785 3 85 2.37E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18735 dcda024bdc92d00608a72c99eb5f1675 317 Gene3D G3DSA:3.40.190.10 180 262 4.4E-5 T 22-04-2016 APT61_RS18735 dcda024bdc92d00608a72c99eb5f1675 317 Gene3D G3DSA:3.40.190.10 94 179 4.8E-20 T 22-04-2016 APT61_RS18735 dcda024bdc92d00608a72c99eb5f1675 317 Gene3D G3DSA:1.10.10.10 1 85 1.6E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18735 dcda024bdc92d00608a72c99eb5f1675 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 4.2E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS18735 dcda024bdc92d00608a72c99eb5f1675 317 Pfam PF03466 LysR substrate binding domain 92 294 1.0E-33 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS18735 dcda024bdc92d00608a72c99eb5f1675 317 PANTHER PTHR30537 1 313 2.8E-103 T 22-04-2016 APT61_RS18735 dcda024bdc92d00608a72c99eb5f1675 317 SUPERFAMILY SSF53850 94 295 3.8E-35 T 22-04-2016 APT61_RS12925 6e7a05b3f9191e596739eee1bc25491a 370 PANTHER PTHR21716 3 370 9.8E-162 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APT61_RS12925 6e7a05b3f9191e596739eee1bc25491a 370 PANTHER PTHR21716:SF20 3 370 9.8E-162 T 22-04-2016 APT61_RS12925 6e7a05b3f9191e596739eee1bc25491a 370 Pfam PF01594 Domain of unknown function DUF20 15 344 1.4E-62 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APT61_RS13815 b8a98de0187169d04b76ebd03f9144c1 487 PANTHER PTHR24423:SF496 64 153 4.2E-159 T 22-04-2016 APT61_RS13815 b8a98de0187169d04b76ebd03f9144c1 487 PANTHER PTHR24423:SF496 209 486 4.2E-159 T 22-04-2016 APT61_RS13815 b8a98de0187169d04b76ebd03f9144c1 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 3.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS13815 b8a98de0187169d04b76ebd03f9144c1 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 3.4E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS13815 b8a98de0187169d04b76ebd03f9144c1 487 SMART SM00387 375 481 5.3E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS13815 b8a98de0187169d04b76ebd03f9144c1 487 SMART SM00388 267 330 0.0084 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS13815 b8a98de0187169d04b76ebd03f9144c1 487 Pfam PF08918 PhoQ Sensor 10 188 4.4E-83 T 22-04-2016 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.- APT61_RS13815 b8a98de0187169d04b76ebd03f9144c1 487 SUPERFAMILY SSF55874 337 476 8.12E-31 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS13815 b8a98de0187169d04b76ebd03f9144c1 487 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 467 4.3E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS13815 b8a98de0187169d04b76ebd03f9144c1 487 PANTHER PTHR24423 64 153 4.2E-159 T 22-04-2016 APT61_RS13815 b8a98de0187169d04b76ebd03f9144c1 487 PANTHER PTHR24423 209 486 4.2E-159 T 22-04-2016 APT61_RS13815 b8a98de0187169d04b76ebd03f9144c1 487 Pfam PF00672 HAMP domain 196 260 3.4E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS13815 b8a98de0187169d04b76ebd03f9144c1 487 Gene3D G3DSA:3.30.565.10 341 476 5.2E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS17080 f867fdebd58d1d36d5ac9845c0cc7c00 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 1.8E-55 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC APT61_RS17080 f867fdebd58d1d36d5ac9845c0cc7c00 159 SUPERFAMILY SSF55826 2 155 8.24E-43 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APT61_RS17080 f867fdebd58d1d36d5ac9845c0cc7c00 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 146 5.5E-21 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APT61_RS17080 f867fdebd58d1d36d5ac9845c0cc7c00 159 PANTHER PTHR30411:SF0 1 159 1.5E-72 T 22-04-2016 APT61_RS17080 f867fdebd58d1d36d5ac9845c0cc7c00 159 PIRSF PIRSF006181 1 159 1.2E-57 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC APT61_RS17080 f867fdebd58d1d36d5ac9845c0cc7c00 159 PANTHER PTHR30411 1 159 1.5E-72 T 22-04-2016 APT61_RS17080 f867fdebd58d1d36d5ac9845c0cc7c00 159 Gene3D G3DSA:3.90.960.10 1 157 2.3E-59 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 1.5E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 1.5E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 1.5E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 1.5E-24 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 PANTHER PTHR34471 2 156 6.0E-68 T 22-04-2016 APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 151 1.6E-48 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 SUPERFAMILY SSF55252 82 149 5.36E-19 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 60.763 T 22-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 Gene3D G3DSA:1.10.10.10 2 77 1.1E-35 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 SUPERFAMILY SSF46785 3 77 1.72E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 1.0E-29 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 74 5.4E-26 T 22-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 1.2E-22 T 22-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 Gene3D G3DSA:3.30.1360.40 80 154 1.1E-26 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain APT61_RS02475 cf624154e60d9ebd594552cf696b691c 156 PANTHER PTHR34471:SF1 2 156 6.0E-68 T 22-04-2016 APT61_RS20190 40f001bf52fedb9e91ee143fe3e533b1 469 PIRSF PIRSF006060 1 469 8.0E-68 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS20190 40f001bf52fedb9e91ee143fe3e533b1 469 PANTHER PTHR11785:SF336 1 464 3.7E-220 T 22-04-2016 APT61_RS20190 40f001bf52fedb9e91ee143fe3e533b1 469 PANTHER PTHR11785 1 464 3.7E-220 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS20190 40f001bf52fedb9e91ee143fe3e533b1 469 Pfam PF00324 Amino acid permease 27 465 2.0E-121 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APT61_RS20190 40f001bf52fedb9e91ee143fe3e533b1 469 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APT61_RS10790 de4cb6d7a4611a0a584c5ba9bc113196 327 Pfam PF00248 Aldo/keto reductase family 16 306 3.5E-75 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS10790 de4cb6d7a4611a0a584c5ba9bc113196 327 PANTHER PTHR11732 1 317 7.5E-192 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS10790 de4cb6d7a4611a0a584c5ba9bc113196 327 PANTHER PTHR11732:SF269 1 317 7.5E-192 T 22-04-2016 APT61_RS10790 de4cb6d7a4611a0a584c5ba9bc113196 327 SUPERFAMILY SSF51430 1 312 2.1E-103 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS10790 de4cb6d7a4611a0a584c5ba9bc113196 327 Gene3D G3DSA:3.20.20.100 1 320 2.1E-114 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 Pfam PF02824 TGS domain 405 464 2.6E-21 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 SUPERFAMILY SSF109604 24 207 7.53E-44 T 22-04-2016 APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 SUPERFAMILY SSF81301 196 409 9.32E-64 T 22-04-2016 APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 Gene3D G3DSA:3.10.20.30 405 466 5.9E-26 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 SUPERFAMILY SSF81271 398 464 5.07E-22 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 1.7E-36 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 SUPERFAMILY SSF55021 666 742 6.49E-14 T 22-04-2016 APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 SMART SM00954 251 361 4.3E-65 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 Pfam PF13291 ACT domain 665 741 1.5E-17 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 Gene3D G3DSA:3.30.70.260 665 740 7.2E-28 T 22-04-2016 APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 Pfam PF13328 HD domain 49 191 2.7E-39 T 22-04-2016 IPR003607 HD/PDEase domain APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 PANTHER PTHR21262 55 744 0.0 T 22-04-2016 APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 Gene3D G3DSA:3.30.460.10 194 340 5.2E-51 T 22-04-2016 APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 PANTHER PTHR21262:SF5 55 744 0.0 T 22-04-2016 APT61_RS04620 fac1dc6e08a3c4e356f7f091c647485e 745 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 740 2.9E-186 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 APT61_RS19415 993a439e85f27ef2b374d04669556fcb 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 3.2E-101 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APT61_RS19415 993a439e85f27ef2b374d04669556fcb 388 SMART SM00984 300 387 2.7E-11 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APT61_RS19415 993a439e85f27ef2b374d04669556fcb 388 PIRSF PIRSF500134 1 346 2.6E-120 T 22-04-2016 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00500+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|UniPathway: UPA00038 APT61_RS19415 993a439e85f27ef2b374d04669556fcb 388 PANTHER PTHR11374:SF17 1 364 1.8E-232 T 22-04-2016 APT61_RS19415 993a439e85f27ef2b374d04669556fcb 388 PANTHER PTHR11374 1 364 1.8E-232 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APT61_RS19415 993a439e85f27ef2b374d04669556fcb 388 Gene3D G3DSA:3.40.50.720 285 388 2.0E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS19415 993a439e85f27ef2b374d04669556fcb 388 PIRSF PIRSF000124 1 388 7.7E-135 T 22-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 APT61_RS19415 993a439e85f27ef2b374d04669556fcb 388 SUPERFAMILY SSF51735 1 194 4.27E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS19415 993a439e85f27ef2b374d04669556fcb 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 3.1E-27 T 22-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 APT61_RS19415 993a439e85f27ef2b374d04669556fcb 388 Gene3D G3DSA:3.40.50.720 1 197 7.1E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS19415 993a439e85f27ef2b374d04669556fcb 388 SUPERFAMILY SSF48179 191 287 6.46E-31 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS19415 993a439e85f27ef2b374d04669556fcb 388 SUPERFAMILY SSF52413 283 387 3.92E-26 T 22-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 APT61_RS19415 993a439e85f27ef2b374d04669556fcb 388 Gene3D G3DSA:1.10.1040.10 198 284 7.7E-36 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS19415 993a439e85f27ef2b374d04669556fcb 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 168 9.7E-31 T 22-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 APT61_RS21560 db0c8c3cf7c62badac8f4e80efe6b63a 155 PANTHER PTHR36918 6 155 4.2E-90 T 22-04-2016 APT61_RS21560 db0c8c3cf7c62badac8f4e80efe6b63a 155 SUPERFAMILY SSF54611 2 141 1.87E-53 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APT61_RS21560 db0c8c3cf7c62badac8f4e80efe6b63a 155 Pfam PF02556 Preprotein translocase subunit SecB 5 144 4.3E-57 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APT61_RS21560 db0c8c3cf7c62badac8f4e80efe6b63a 155 PANTHER PTHR36918:SF1 6 155 4.2E-90 T 22-04-2016 APT61_RS21560 db0c8c3cf7c62badac8f4e80efe6b63a 155 Gene3D G3DSA:3.10.420.10 2 151 9.8E-64 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APT61_RS21560 db0c8c3cf7c62badac8f4e80efe6b63a 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 147 7.4E-70 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APT61_RS21560 db0c8c3cf7c62badac8f4e80efe6b63a 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.159 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APT61_RS21560 db0c8c3cf7c62badac8f4e80efe6b63a 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 5.1E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APT61_RS21560 db0c8c3cf7c62badac8f4e80efe6b63a 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 5.1E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APT61_RS21560 db0c8c3cf7c62badac8f4e80efe6b63a 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 5.1E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APT61_RS21560 db0c8c3cf7c62badac8f4e80efe6b63a 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 5.1E-41 T 22-04-2016 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 APT61_RS00830 f06e19d5d07207617626c14328b95ed2 494 SUPERFAMILY SSF53067 131 300 3.11E-40 T 22-04-2016 APT61_RS00830 f06e19d5d07207617626c14328b95ed2 494 SUPERFAMILY SSF109604 307 487 2.09E-44 T 22-04-2016 APT61_RS00830 f06e19d5d07207617626c14328b95ed2 494 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 54.888 T 22-04-2016 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APT61_RS00830 f06e19d5d07207617626c14328b95ed2 494 PIRSF PIRSF001267 1 494 4.9E-184 T 22-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APT61_RS00830 f06e19d5d07207617626c14328b95ed2 494 Gene3D G3DSA:3.30.420.150 128 300 2.9E-51 T 22-04-2016 APT61_RS00830 f06e19d5d07207617626c14328b95ed2 494 Pfam PF02541 Ppx/GppA phosphatase family 21 301 4.6E-101 T 22-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 APT61_RS00830 f06e19d5d07207617626c14328b95ed2 494 PANTHER PTHR30005:SF2 1 492 0.0 T 22-04-2016 APT61_RS00830 f06e19d5d07207617626c14328b95ed2 494 PANTHER PTHR30005 1 492 0.0 T 22-04-2016 APT61_RS00830 f06e19d5d07207617626c14328b95ed2 494 SUPERFAMILY SSF53067 7 128 1.55E-37 T 22-04-2016 APT61_RS00830 f06e19d5d07207617626c14328b95ed2 494 Gene3D G3DSA:3.30.420.40 3 127 1.7E-45 T 22-04-2016 APT61_RS16595 9efd20687073818b6c94114265436290 240 Pfam PF07670 Nucleoside recognition 85 170 7.6E-9 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APT61_RS06025 0ac963779eced3bccb3660a32b58c38b 206 Gene3D G3DSA:1.25.40.10 65 188 1.3E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS06025 0ac963779eced3bccb3660a32b58c38b 206 PANTHER PTHR38035 2 206 1.8E-86 T 22-04-2016 APT61_RS06025 0ac963779eced3bccb3660a32b58c38b 206 PIRSF PIRSF006170 1 206 2.7E-57 T 22-04-2016 IPR026039 Uncharacterised protein family UPF0070 APT61_RS06025 0ac963779eced3bccb3660a32b58c38b 206 SUPERFAMILY SSF48452 91 186 1.85E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS06025 0ac963779eced3bccb3660a32b58c38b 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 1.6E-54 T 22-04-2016 IPR018704 Tetratricopeptide repeat-like domain APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 Gene3D G3DSA:3.90.480.10 342 421 1.4E-62 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 Gene3D G3DSA:3.90.480.10 74 146 1.4E-62 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 SUPERFAMILY SSF56014 428 559 2.88E-34 T 22-04-2016 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 PANTHER PTHR11493:SF47 1 559 7.9E-276 T 22-04-2016 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 SUPERFAMILY SSF56014 150 344 5.5E-61 T 22-04-2016 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 Gene3D G3DSA:3.30.413.10 430 557 1.2E-34 T 22-04-2016 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 Gene3D G3DSA:3.30.413.10 150 340 9.8E-73 T 22-04-2016 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 SUPERFAMILY SSF55124 346 421 2.13E-21 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 SUPERFAMILY SSF55124 13 142 1.08E-25 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 PRINTS PR00397 Sirohaem Fe-binding site signature 429 447 1.5E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 PRINTS PR00397 Sirohaem Fe-binding site signature 477 495 1.5E-8 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 558 9.6E-298 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 PANTHER PTHR11493 1 559 7.9E-276 T 22-04-2016 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 477 493 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 416 6.3E-15 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 81 138 1.7E-12 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 545 0.0023 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 331 2.8E-47 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS04660 55db909706fc2c1bd8edfe47f8a88437 570 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 570 58.522 T 22-04-2016 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 APT61_RS17005 2ab1e2d0fad673abec06c52cb3a5a318 355 SUPERFAMILY SSF51246 278 352 5.26E-20 T 22-04-2016 IPR011054 Rudiment single hybrid motif APT61_RS17005 2ab1e2d0fad673abec06c52cb3a5a318 355 Gene3D G3DSA:3.40.50.20 1 69 1.6E-23 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS17005 2ab1e2d0fad673abec06c52cb3a5a318 355 PANTHER PTHR11609:SF5 1 336 2.8E-106 T 22-04-2016 APT61_RS17005 2ab1e2d0fad673abec06c52cb3a5a318 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 327 4.3E-111 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APT61_RS17005 2ab1e2d0fad673abec06c52cb3a5a318 355 PANTHER PTHR11609 1 336 2.8E-106 T 22-04-2016 APT61_RS17005 2ab1e2d0fad673abec06c52cb3a5a318 355 Gene3D G3DSA:3.30.470.20 119 352 9.6E-80 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS17005 2ab1e2d0fad673abec06c52cb3a5a318 355 SUPERFAMILY SSF56059 79 274 1.12E-55 T 22-04-2016 APT61_RS17005 2ab1e2d0fad673abec06c52cb3a5a318 355 Pfam PF02222 ATP-grasp domain 88 254 2.8E-54 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 APT61_RS17005 2ab1e2d0fad673abec06c52cb3a5a318 355 SUPERFAMILY SSF52440 2 76 2.59E-15 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS17005 2ab1e2d0fad673abec06c52cb3a5a318 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 32.671 T 22-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 APT61_RS16925 ad5a8fd075f79d12836972186b22855c 657 Gene3D G3DSA:2.120.10.30 413 468 2.9E-7 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APT61_RS16925 ad5a8fd075f79d12836972186b22855c 657 Gene3D G3DSA:2.120.10.30 510 607 2.9E-7 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APT61_RS16925 ad5a8fd075f79d12836972186b22855c 657 Pfam PF05787 Bacterial protein of unknown function (DUF839) 78 613 7.8E-185 T 22-04-2016 IPR008557 Protein of unknown function DUF839 APT61_RS16925 ad5a8fd075f79d12836972186b22855c 657 SUPERFAMILY SSF101898 345 398 1.02E-9 T 22-04-2016 APT61_RS16925 ad5a8fd075f79d12836972186b22855c 657 SUPERFAMILY SSF101898 533 607 1.02E-9 T 22-04-2016 APT61_RS16925 ad5a8fd075f79d12836972186b22855c 657 SUPERFAMILY SSF101898 443 505 1.02E-9 T 22-04-2016 APT61_RS16925 ad5a8fd075f79d12836972186b22855c 657 PANTHER PTHR35399 15 657 1.2E-215 T 22-04-2016 APT61_RS16925 ad5a8fd075f79d12836972186b22855c 657 PANTHER PTHR35399:SF2 15 657 1.2E-215 T 22-04-2016 APT61_RS17250 02cbe123ba7efec1355bcad3afe75b0a 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.9E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APT61_RS17250 02cbe123ba7efec1355bcad3afe75b0a 112 PANTHER PTHR30115:SF12 1 112 3.7E-83 T 22-04-2016 APT61_RS17250 02cbe123ba7efec1355bcad3afe75b0a 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 22-04-2016 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 APT61_RS17250 02cbe123ba7efec1355bcad3afe75b0a 112 SMART SM00938 4 105 4.6E-61 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APT61_RS17250 02cbe123ba7efec1355bcad3afe75b0a 112 Gene3D G3DSA:3.30.70.120 1 112 1.1E-47 T 22-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal APT61_RS17250 02cbe123ba7efec1355bcad3afe75b0a 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 22-04-2016 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 APT61_RS17250 02cbe123ba7efec1355bcad3afe75b0a 112 PIRSF PIRSF039144 1 112 1.1E-52 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APT61_RS17250 02cbe123ba7efec1355bcad3afe75b0a 112 PANTHER PTHR30115 1 112 3.7E-83 T 22-04-2016 APT61_RS17250 02cbe123ba7efec1355bcad3afe75b0a 112 PRINTS PR00340 P-II protein signature 52 75 5.6E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APT61_RS17250 02cbe123ba7efec1355bcad3afe75b0a 112 PRINTS PR00340 P-II protein signature 83 103 5.6E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APT61_RS17250 02cbe123ba7efec1355bcad3afe75b0a 112 PRINTS PR00340 P-II protein signature 23 41 5.6E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APT61_RS17250 02cbe123ba7efec1355bcad3afe75b0a 112 PRINTS PR00340 P-II protein signature 2 17 5.6E-41 T 22-04-2016 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 APT61_RS17250 02cbe123ba7efec1355bcad3afe75b0a 112 SUPERFAMILY SSF54913 1 112 4.45E-42 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APT61_RS11445 0c92c672a016c72acaf6b7a661129494 483 PANTHER PTHR30524:SF1 2 483 0.0 T 22-04-2016 APT61_RS11445 0c92c672a016c72acaf6b7a661129494 483 SUPERFAMILY SSF51735 3 263 5.9E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11445 0c92c672a016c72acaf6b7a661129494 483 Gene3D G3DSA:1.10.1040.10 272 482 1.3E-67 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS11445 0c92c672a016c72acaf6b7a661129494 483 SUPERFAMILY SSF48179 273 482 3.4E-52 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS11445 0c92c672a016c72acaf6b7a661129494 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 3.6E-39 T 22-04-2016 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 APT61_RS11445 0c92c672a016c72acaf6b7a661129494 483 Gene3D G3DSA:3.40.50.720 4 265 4.1E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11445 0c92c672a016c72acaf6b7a661129494 483 PANTHER PTHR30524 2 483 0.0 T 22-04-2016 APT61_RS11445 0c92c672a016c72acaf6b7a661129494 483 Hamap MF_00670 Altronate oxidoreductase [uxaB]. 1 483 55.337 T 22-04-2016 IPR023668 Altronate oxidoreductase GO:0009026|GO:0055114 KEGG: 00040+1.1.1.58|UniPathway: UPA00246 APT61_RS11445 0c92c672a016c72acaf6b7a661129494 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 204 458 1.4E-77 T 22-04-2016 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 APT61_RS17015 93b043a9c424a09499fd4b349989f531 381 SUPERFAMILY SSF56935 44 381 3.66E-30 T 22-04-2016 APT61_RS17015 93b043a9c424a09499fd4b349989f531 381 Gene3D G3DSA:2.40.160.10 44 381 7.4E-39 T 22-04-2016 IPR023614 Porin domain APT61_RS17015 93b043a9c424a09499fd4b349989f531 381 Pfam PF03797 Autotransporter beta-domain 212 317 9.2E-9 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS16880 16240a8deec017e9706458cf0286d253 478 PANTHER PTHR23501:SF26 12 465 2.9E-160 T 22-04-2016 APT61_RS16880 16240a8deec017e9706458cf0286d253 478 Gene3D G3DSA:1.20.1250.20 271 457 1.2E-10 T 22-04-2016 APT61_RS16880 16240a8deec017e9706458cf0286d253 478 PANTHER PTHR23501 12 465 2.9E-160 T 22-04-2016 APT61_RS16880 16240a8deec017e9706458cf0286d253 478 Pfam PF07690 Major Facilitator Superfamily 18 419 2.3E-36 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS16880 16240a8deec017e9706458cf0286d253 478 SUPERFAMILY SSF103473 254 463 2.09E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS16880 16240a8deec017e9706458cf0286d253 478 SUPERFAMILY SSF103473 13 205 2.09E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS16880 16240a8deec017e9706458cf0286d253 478 Gene3D G3DSA:1.20.1250.20 13 198 1.0E-22 T 22-04-2016 APT61_RS18320 46ae09d51dec663c8af4591aeae3ad70 458 Pfam PF00654 Voltage gated chloride channel 89 437 7.2E-89 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS18320 46ae09d51dec663c8af4591aeae3ad70 458 PRINTS PR00762 Chloride channel signature 405 424 1.2E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS18320 46ae09d51dec663c8af4591aeae3ad70 458 PRINTS PR00762 Chloride channel signature 352 372 1.2E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS18320 46ae09d51dec663c8af4591aeae3ad70 458 PRINTS PR00762 Chloride channel signature 183 202 1.2E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS18320 46ae09d51dec663c8af4591aeae3ad70 458 PRINTS PR00762 Chloride channel signature 387 403 1.2E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS18320 46ae09d51dec663c8af4591aeae3ad70 458 PRINTS PR00762 Chloride channel signature 102 119 1.2E-28 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS18320 46ae09d51dec663c8af4591aeae3ad70 458 PANTHER PTHR11689:SF96 9 451 2.4E-199 T 22-04-2016 APT61_RS18320 46ae09d51dec663c8af4591aeae3ad70 458 Gene3D G3DSA:1.10.3080.10 27 451 2.0E-98 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APT61_RS18320 46ae09d51dec663c8af4591aeae3ad70 458 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 3 458 48.148 T 22-04-2016 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 APT61_RS18320 46ae09d51dec663c8af4591aeae3ad70 458 SUPERFAMILY SSF81340 16 452 1.07E-106 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APT61_RS18320 46ae09d51dec663c8af4591aeae3ad70 458 PANTHER PTHR11689 9 451 2.4E-199 T 22-04-2016 APT61_RS18335 e21b06217781572e4e04469ae283ce80 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 185 200 3.4E-50 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APT61_RS18335 e21b06217781572e4e04469ae283ce80 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 237 254 3.4E-50 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APT61_RS18335 e21b06217781572e4e04469ae283ce80 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 87 102 3.4E-50 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APT61_RS18335 e21b06217781572e4e04469ae283ce80 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 274 287 3.4E-50 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APT61_RS18335 e21b06217781572e4e04469ae283ce80 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 56 74 3.4E-50 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APT61_RS18335 e21b06217781572e4e04469ae283ce80 297 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 209 227 3.4E-50 T 22-04-2016 IPR008091 Ferrichrome-binding periplasmic protein APT61_RS18335 e21b06217781572e4e04469ae283ce80 297 PANTHER PTHR30532 35 296 2.7E-73 T 22-04-2016 APT61_RS18335 e21b06217781572e4e04469ae283ce80 297 Pfam PF01497 Periplasmic binding protein 39 271 1.8E-29 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APT61_RS18335 e21b06217781572e4e04469ae283ce80 297 PANTHER PTHR30532:SF1 35 296 2.7E-73 T 22-04-2016 APT61_RS18335 e21b06217781572e4e04469ae283ce80 297 SUPERFAMILY SSF53807 35 293 3.06E-56 T 22-04-2016 APT61_RS18335 e21b06217781572e4e04469ae283ce80 297 Gene3D G3DSA:3.40.50.1980 34 121 2.0E-31 T 22-04-2016 APT61_RS18335 e21b06217781572e4e04469ae283ce80 297 Gene3D G3DSA:3.40.50.1980 125 295 8.8E-60 T 22-04-2016 APT61_RS21075 4be74281204b6aca834eff48ebc5a112 533 Gene3D G3DSA:1.20.1220.12 414 526 1.4E-37 T 22-04-2016 APT61_RS21075 4be74281204b6aca834eff48ebc5a112 533 Gene3D G3DSA:3.20.20.360 73 413 2.3E-123 T 22-04-2016 APT61_RS21075 4be74281204b6aca834eff48ebc5a112 533 ProSitePatterns PS00510 Malate synthase signature. 266 281 - T 22-04-2016 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APT61_RS21075 4be74281204b6aca834eff48ebc5a112 533 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 24 532 5.2E-254 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APT61_RS21075 4be74281204b6aca834eff48ebc5a112 533 PIRSF PIRSF001363 2 533 1.5E-252 T 22-04-2016 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APT61_RS21075 4be74281204b6aca834eff48ebc5a112 533 PANTHER PTHR21631 1 532 9.3E-280 T 22-04-2016 APT61_RS21075 4be74281204b6aca834eff48ebc5a112 533 Pfam PF01274 Malate synthase 13 532 6.7E-211 T 22-04-2016 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APT61_RS21075 4be74281204b6aca834eff48ebc5a112 533 PANTHER PTHR21631:SF1 1 532 9.3E-280 T 22-04-2016 APT61_RS21075 4be74281204b6aca834eff48ebc5a112 533 SUPERFAMILY SSF51645 16 532 1.83E-189 T 22-04-2016 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00703 APT61_RS01990 e8c6d9274287a1bebd511e0c2ec94c0b 72 Pfam PF04102 SlyX 6 72 8.5E-24 T 22-04-2016 IPR007236 SlyX APT61_RS01990 e8c6d9274287a1bebd511e0c2ec94c0b 72 Gene3D G3DSA:1.20.5.300 2 52 7.8E-22 T 22-04-2016 APT61_RS01990 e8c6d9274287a1bebd511e0c2ec94c0b 72 PANTHER PTHR36508 1 72 8.1E-27 T 22-04-2016 APT61_RS01990 e8c6d9274287a1bebd511e0c2ec94c0b 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 16.705 T 22-04-2016 IPR007236 SlyX APT61_RS01085 f0f41dccee956174739e849869757d18 84 PANTHER PTHR33162 1 74 1.7E-22 T 22-04-2016 APT61_RS01085 f0f41dccee956174739e849869757d18 84 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.3E-20 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APT61_RS01085 f0f41dccee956174739e849869757d18 84 Pfam PF02416 mttA/Hcf106 family 4 56 5.4E-17 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 APT61_RS01085 f0f41dccee956174739e849869757d18 84 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 82 24.559 T 22-04-2016 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 APT61_RS07640 74e5a4def7bcd9dc2150f7f9a1ae5b70 193 PANTHER PTHR11241:SF1 77 192 2.1E-66 T 22-04-2016 APT61_RS07640 74e5a4def7bcd9dc2150f7f9a1ae5b70 193 PANTHER PTHR11241:SF1 1 58 2.1E-66 T 22-04-2016 APT61_RS07640 74e5a4def7bcd9dc2150f7f9a1ae5b70 193 SUPERFAMILY SSF51283 1 193 5.23E-59 T 22-04-2016 IPR029054 dUTPase-like APT61_RS07640 74e5a4def7bcd9dc2150f7f9a1ae5b70 193 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 190 33.701 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 APT61_RS07640 74e5a4def7bcd9dc2150f7f9a1ae5b70 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 8.1E-68 T 22-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 APT61_RS07640 74e5a4def7bcd9dc2150f7f9a1ae5b70 193 Gene3D G3DSA:2.70.40.10 1 192 5.2E-59 T 22-04-2016 IPR029054 dUTPase-like APT61_RS07640 74e5a4def7bcd9dc2150f7f9a1ae5b70 193 Pfam PF00692 dUTPase 79 185 9.1E-9 T 22-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 APT61_RS07640 74e5a4def7bcd9dc2150f7f9a1ae5b70 193 PANTHER PTHR11241 77 192 2.1E-66 T 22-04-2016 APT61_RS07640 74e5a4def7bcd9dc2150f7f9a1ae5b70 193 PANTHER PTHR11241 1 58 2.1E-66 T 22-04-2016 APT61_RS04345 fb803ae82bdd506225068bc145c855f0 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 2.0E-62 T 22-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 APT61_RS04345 fb803ae82bdd506225068bc145c855f0 230 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 193 203 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS04345 fb803ae82bdd506225068bc145c855f0 230 Gene3D G3DSA:3.40.50.1860 1 113 1.6E-44 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS04345 fb803ae82bdd506225068bc145c855f0 230 PANTHER PTHR21198 1 228 1.5E-92 T 22-04-2016 APT61_RS04345 fb803ae82bdd506225068bc145c855f0 230 PANTHER PTHR21198:SF7 1 228 1.5E-92 T 22-04-2016 APT61_RS04345 fb803ae82bdd506225068bc145c855f0 230 SUPERFAMILY SSF53681 1 116 1.6E-35 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS04345 fb803ae82bdd506225068bc145c855f0 230 SUPERFAMILY SSF53681 118 229 4.09E-31 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS04345 fb803ae82bdd506225068bc145c855f0 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 1.0E-55 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS04345 fb803ae82bdd506225068bc145c855f0 230 Gene3D G3DSA:3.40.50.1860 114 216 5.5E-34 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS14850 5a4aa76f215064cf37ce71c2f1d156da 256 Gene3D G3DSA:3.40.50.300 11 212 4.6E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14850 5a4aa76f215064cf37ce71c2f1d156da 256 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS14850 5a4aa76f215064cf37ce71c2f1d156da 256 PANTHER PTHR24220:SF365 13 244 6.6E-146 T 22-04-2016 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB GO:0005215|GO:0005524|GO:0005886|GO:0006810 APT61_RS14850 5a4aa76f215064cf37ce71c2f1d156da 256 PANTHER PTHR24220 13 244 6.6E-146 T 22-04-2016 APT61_RS14850 5a4aa76f215064cf37ce71c2f1d156da 256 Pfam PF00005 ABC transporter 27 160 3.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS14850 5a4aa76f215064cf37ce71c2f1d156da 256 SMART SM00382 36 210 2.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS14850 5a4aa76f215064cf37ce71c2f1d156da 256 SUPERFAMILY SSF52540 13 213 9.09E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15190 8bd7f48f7de2a494b4b5244dfb6b3a01 338 SUPERFAMILY SSF158544 225 277 2.62E-15 T 22-04-2016 APT61_RS15190 8bd7f48f7de2a494b4b5244dfb6b3a01 338 SUPERFAMILY SSF158544 106 221 4.45E-20 T 22-04-2016 APT61_RS15190 8bd7f48f7de2a494b4b5244dfb6b3a01 338 PANTHER PTHR38831 1 338 1.2E-20 T 22-04-2016 APT61_RS15190 8bd7f48f7de2a494b4b5244dfb6b3a01 338 Gene3D G3DSA:1.10.40.60 104 222 4.7E-23 T 22-04-2016 APT61_RS15190 8bd7f48f7de2a494b4b5244dfb6b3a01 338 PANTHER PTHR38831:SF1 1 338 1.2E-20 T 22-04-2016 APT61_RS15190 8bd7f48f7de2a494b4b5244dfb6b3a01 338 Gene3D G3DSA:1.10.40.60 225 275 2.7E-20 T 22-04-2016 APT61_RS15190 8bd7f48f7de2a494b4b5244dfb6b3a01 338 Pfam PF03934 Type II secretion system (T2SS), protein K 35 322 1.4E-58 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 APT61_RS15190 8bd7f48f7de2a494b4b5244dfb6b3a01 338 PIRSF PIRSF002786 5 338 5.5E-52 T 22-04-2016 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 3.3E-21 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 SUPERFAMILY SSF53738 305 446 3.3E-32 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 Gene3D G3DSA:3.40.120.10 226 316 6.1E-46 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 SUPERFAMILY SSF53738 26 235 1.51E-49 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 SUPERFAMILY SSF53738 209 317 3.77E-9 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 7.7E-35 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 Gene3D G3DSA:3.30.310.50 466 545 3.7E-29 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 PANTHER PTHR22573:SF52 18 546 1.2E-291 T 22-04-2016 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 22-04-2016 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 1.1E-30 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 PANTHER PTHR22573 18 546 1.2E-291 T 22-04-2016 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 Gene3D G3DSA:3.40.120.10 318 441 1.6E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 SUPERFAMILY SSF55957 433 544 6.63E-19 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 538 5.6E-8 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS16215 56e0abc4b799541c67aaff841664021e 546 Gene3D G3DSA:3.40.120.10 33 225 9.6E-60 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS04715 7cecd5a3779a9272bd30d39550e1e886 103 PANTHER PTHR37485 2 103 8.4E-51 T 22-04-2016 APT61_RS04715 7cecd5a3779a9272bd30d39550e1e886 103 PANTHER PTHR37485:SF1 2 103 8.4E-51 T 22-04-2016 APT61_RS04715 7cecd5a3779a9272bd30d39550e1e886 103 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.146 T 22-04-2016 IPR023081 Cell division protein FtsB APT61_RS04715 7cecd5a3779a9272bd30d39550e1e886 103 Pfam PF04977 Septum formation initiator 11 89 6.7E-30 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 APT61_RS22125 0d0f7bab57a20d5d6d4c2ba62b6414c5 248 Gene3D G3DSA:3.90.470.20 29 107 2.3E-7 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS11345 359f6bcb4774dc6a00198fb8b7757f68 302 Gene3D G3DSA:1.10.10.10 1 84 7.5E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11345 359f6bcb4774dc6a00198fb8b7757f68 302 Gene3D G3DSA:3.40.190.10 171 266 4.0E-25 T 22-04-2016 APT61_RS11345 359f6bcb4774dc6a00198fb8b7757f68 302 SUPERFAMILY SSF53850 93 296 2.53E-37 T 22-04-2016 APT61_RS11345 359f6bcb4774dc6a00198fb8b7757f68 302 PANTHER PTHR30118 1 298 3.1E-85 T 22-04-2016 APT61_RS11345 359f6bcb4774dc6a00198fb8b7757f68 302 Pfam PF03466 LysR substrate binding domain 101 297 2.1E-24 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS11345 359f6bcb4774dc6a00198fb8b7757f68 302 Gene3D G3DSA:3.40.190.10 94 170 1.1E-24 T 22-04-2016 APT61_RS11345 359f6bcb4774dc6a00198fb8b7757f68 302 Gene3D G3DSA:3.40.190.10 272 300 1.1E-24 T 22-04-2016 APT61_RS11345 359f6bcb4774dc6a00198fb8b7757f68 302 PANTHER PTHR30118:SF5 1 298 3.1E-85 T 22-04-2016 APT61_RS11345 359f6bcb4774dc6a00198fb8b7757f68 302 SUPERFAMILY SSF46785 3 82 4.83E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11345 359f6bcb4774dc6a00198fb8b7757f68 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 1.4E-12 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS16545 806b17ac0e9d3fba70e3969950e02e9f 342 Gene3D G3DSA:3.40.50.10470 147 333 1.1E-65 T 22-04-2016 APT61_RS16545 806b17ac0e9d3fba70e3969950e02e9f 342 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 8 328 4.5E-122 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 APT61_RS16545 806b17ac0e9d3fba70e3969950e02e9f 342 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 35 329 6.1E-94 T 22-04-2016 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 APT61_RS16545 806b17ac0e9d3fba70e3969950e02e9f 342 PANTHER PTHR10233:SF6 8 332 4.6E-138 T 22-04-2016 APT61_RS16545 806b17ac0e9d3fba70e3969950e02e9f 342 PANTHER PTHR10233 8 332 4.6E-138 T 22-04-2016 APT61_RS16545 806b17ac0e9d3fba70e3969950e02e9f 342 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 5 341 36.528 T 22-04-2016 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 APT61_RS16545 806b17ac0e9d3fba70e3969950e02e9f 342 Pfam PF01008 Initiation factor 2 subunit family 48 329 2.8E-68 T 22-04-2016 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 APT61_RS16545 806b17ac0e9d3fba70e3969950e02e9f 342 Gene3D G3DSA:1.20.120.420 7 146 2.5E-37 T 22-04-2016 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|UniPathway: UPA00904 APT61_RS16545 806b17ac0e9d3fba70e3969950e02e9f 342 SUPERFAMILY SSF100950 8 332 1.26E-107 T 22-04-2016 APT61_RS22220 979044451650dcb79e3b098b7a214de4 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 8.1E-62 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 APT61_RS22220 979044451650dcb79e3b098b7a214de4 156 SUPERFAMILY SSF81573 63 121 2.35E-15 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain APT61_RS22220 979044451650dcb79e3b098b7a214de4 156 PANTHER PTHR33445 1 156 1.0E-49 T 22-04-2016 APT61_RS22220 979044451650dcb79e3b098b7a214de4 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 2.7E-40 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APT61_RS22220 979044451650dcb79e3b098b7a214de4 156 Gene3D G3DSA:1.20.5.620 62 122 6.8E-26 T 22-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain APT61_RS22220 979044451650dcb79e3b098b7a214de4 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 156 13.177 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APT61_RS21300 3eccf87d2c67c929cafba9df8b499fc5 563 PANTHER PTHR30443 1 556 0.0 T 22-04-2016 APT61_RS21300 3eccf87d2c67c929cafba9df8b499fc5 563 PANTHER PTHR30443:SF3 1 556 0.0 T 22-04-2016 APT61_RS21300 3eccf87d2c67c929cafba9df8b499fc5 563 Pfam PF00884 Sulfatase 250 538 1.3E-47 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APT61_RS21300 3eccf87d2c67c929cafba9df8b499fc5 563 Pfam PF08019 Domain of unknown function (DUF1705) 57 169 1.6E-18 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 APT61_RS21300 3eccf87d2c67c929cafba9df8b499fc5 563 SUPERFAMILY SSF53649 250 543 7.85E-20 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APT61_RS21300 3eccf87d2c67c929cafba9df8b499fc5 563 Gene3D G3DSA:3.40.720.10 250 543 1.6E-15 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APT61_RS06150 7dca7704e9773d9c6a3a89f1446979e5 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 4.3E-65 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS06150 7dca7704e9773d9c6a3a89f1446979e5 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.381 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 APT61_RS06150 7dca7704e9773d9c6a3a89f1446979e5 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 2.5E-90 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 APT61_RS06150 7dca7704e9773d9c6a3a89f1446979e5 208 SUPERFAMILY SSF53271 4 206 5.64E-66 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS06150 7dca7704e9773d9c6a3a89f1446979e5 208 PANTHER PTHR10285 1 197 7.5E-104 T 22-04-2016 APT61_RS06150 7dca7704e9773d9c6a3a89f1446979e5 208 Gene3D G3DSA:3.40.50.2020 2 208 1.2E-75 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS07960 54c54a27629ec4b9b9f0494eac1f9e63 265 Pfam PF06167 Glucose-regulated metallo-peptidase M90 19 243 1.1E-63 T 22-04-2016 IPR010384 MtfA family APT61_RS07960 54c54a27629ec4b9b9f0494eac1f9e63 265 PANTHER PTHR30164 1 259 2.6E-103 T 22-04-2016 APT61_RS07960 54c54a27629ec4b9b9f0494eac1f9e63 265 Gene3D G3DSA:3.40.390.10 27 244 4.0E-27 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APT61_RS07960 54c54a27629ec4b9b9f0494eac1f9e63 265 SUPERFAMILY SSF55486 33 245 5.93E-41 T 22-04-2016 APT61_RS07960 54c54a27629ec4b9b9f0494eac1f9e63 265 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 64.809 T 22-04-2016 IPR010384 MtfA family APT61_RS00340 6824fece2764985df7c35bc356c18e61 300 Gene3D G3DSA:3.30.70.20 29 103 1.1E-37 T 22-04-2016 APT61_RS00340 6824fece2764985df7c35bc356c18e61 300 Gene3D G3DSA:3.30.70.20 173 227 1.1E-37 T 22-04-2016 APT61_RS00340 6824fece2764985df7c35bc356c18e61 300 PIRSF PIRSF036298 1 300 5.4E-167 T 22-04-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 APT61_RS00340 6824fece2764985df7c35bc356c18e61 300 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS00340 6824fece2764985df7c35bc356c18e61 300 PANTHER PTHR11938:SF84 1 204 1.8E-159 T 22-04-2016 APT61_RS00340 6824fece2764985df7c35bc356c18e61 300 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 289 1.1E-146 T 22-04-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 APT61_RS00340 6824fece2764985df7c35bc356c18e61 300 PANTHER PTHR11938 1 204 1.8E-159 T 22-04-2016 APT61_RS00340 6824fece2764985df7c35bc356c18e61 300 Gene3D G3DSA:1.20.5.480 247 294 1.5E-26 T 22-04-2016 APT61_RS00340 6824fece2764985df7c35bc356c18e61 300 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 288 2.0E-21 T 22-04-2016 IPR015246 Formate dehydrogenase, transmembrane APT61_RS00340 6824fece2764985df7c35bc356c18e61 300 SUPERFAMILY SSF54862 28 282 2.3E-73 T 22-04-2016 APT61_RS00340 6824fece2764985df7c35bc356c18e61 300 Gene3D G3DSA:3.30.70.20 104 137 2.3E-11 T 22-04-2016 APT61_RS00340 6824fece2764985df7c35bc356c18e61 300 Gene3D G3DSA:3.30.70.20 138 172 5.5E-16 T 22-04-2016 APT61_RS00340 6824fece2764985df7c35bc356c18e61 300 Pfam PF13247 4Fe-4S dicluster domain 92 188 2.7E-25 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS10615 60c650ec393424cf07deaea931de707e 290 Gene3D G3DSA:1.10.10.60 188 240 1.8E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS10615 60c650ec393424cf07deaea931de707e 290 PANTHER PTHR11019 72 287 1.2E-41 T 22-04-2016 APT61_RS10615 60c650ec393424cf07deaea931de707e 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 1.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS10615 60c650ec393424cf07deaea931de707e 290 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 1.0E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS10615 60c650ec393424cf07deaea931de707e 290 Gene3D G3DSA:1.10.10.60 241 288 4.3E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS10615 60c650ec393424cf07deaea931de707e 290 SUPERFAMILY SSF46689 239 288 1.93E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS10615 60c650ec393424cf07deaea931de707e 290 SUPERFAMILY SSF46689 188 237 9.41E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS10615 60c650ec393424cf07deaea931de707e 290 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS10615 60c650ec393424cf07deaea931de707e 290 PANTHER PTHR11019:SF105 72 287 1.2E-41 T 22-04-2016 APT61_RS10615 60c650ec393424cf07deaea931de707e 290 Pfam PF12833 Helix-turn-helix domain 209 287 3.3E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS10615 60c650ec393424cf07deaea931de707e 290 SMART SM00342 203 286 5.3E-36 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS19235 9bc33cbaa7f50123676c8312d48144fa 447 PANTHER PTHR33989 6 445 1.0E-148 T 22-04-2016 APT61_RS19235 9bc33cbaa7f50123676c8312d48144fa 447 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 20 434 1.2E-111 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 APT61_RS19235 9bc33cbaa7f50123676c8312d48144fa 447 Pfam PF02378 Phosphotransferase system, EIIC 36 359 1.3E-55 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS19235 9bc33cbaa7f50123676c8312d48144fa 447 PIRSF PIRSF006351 9 444 4.1E-140 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 APT61_RS05970 9ca6afa0df5ea67291510fc4aa37264d 256 Gene3D G3DSA:3.40.50.10490 66 246 6.0E-22 T 22-04-2016 APT61_RS05970 9ca6afa0df5ea67291510fc4aa37264d 256 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 75 4.2E-15 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 APT61_RS05970 9ca6afa0df5ea67291510fc4aa37264d 256 SUPERFAMILY SSF46689 3 77 5.55E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS05970 9ca6afa0df5ea67291510fc4aa37264d 256 PANTHER PTHR30514:SF1 13 225 9.5E-37 T 22-04-2016 APT61_RS05970 9ca6afa0df5ea67291510fc4aa37264d 256 Gene3D G3DSA:1.10.10.10 3 65 1.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05970 9ca6afa0df5ea67291510fc4aa37264d 256 SUPERFAMILY SSF53697 96 249 2.49E-24 T 22-04-2016 APT61_RS05970 9ca6afa0df5ea67291510fc4aa37264d 256 PANTHER PTHR30514 13 225 9.5E-37 T 22-04-2016 APT61_RS05970 9ca6afa0df5ea67291510fc4aa37264d 256 Pfam PF01380 SIS domain 120 250 5.0E-17 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APT61_RS16365 8587434a909dbbcc6e71d096cdbbab0a 224 SUPERFAMILY SSF161098 14 210 3.92E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS16365 8587434a909dbbcc6e71d096cdbbab0a 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 4.6E-24 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APT61_RS16365 8587434a909dbbcc6e71d096cdbbab0a 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 1.0E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS16365 8587434a909dbbcc6e71d096cdbbab0a 224 Gene3D G3DSA:1.10.3720.10 13 222 4.7E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS16365 8587434a909dbbcc6e71d096cdbbab0a 224 PANTHER PTHR30614 1 222 7.9E-143 T 22-04-2016 APT61_RS16365 8587434a909dbbcc6e71d096cdbbab0a 224 PANTHER PTHR30614:SF1 1 222 7.9E-143 T 22-04-2016 IPR030205 Glutamate/aspartate transport system permease protein GltK/AatM GO:0006865|GO:0016021|GO:0043190 APT61_RS11430 497703d6745812d9a11c5f30d3360a96 246 Pfam PF00072 Response regulator receiver domain 7 118 1.2E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS11430 497703d6745812d9a11c5f30d3360a96 246 PANTHER PTHR26402 5 239 1.6E-92 T 22-04-2016 APT61_RS11430 497703d6745812d9a11c5f30d3360a96 246 SUPERFAMILY SSF52172 6 135 2.13E-41 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS11430 497703d6745812d9a11c5f30d3360a96 246 Gene3D G3DSA:3.40.50.2300 5 125 6.4E-41 T 22-04-2016 APT61_RS11430 497703d6745812d9a11c5f30d3360a96 246 Gene3D G3DSA:1.10.10.10 136 237 3.3E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11430 497703d6745812d9a11c5f30d3360a96 246 PANTHER PTHR26402:SF528 5 239 1.6E-92 T 22-04-2016 APT61_RS11430 497703d6745812d9a11c5f30d3360a96 246 SMART SM00862 159 235 4.7E-17 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS11430 497703d6745812d9a11c5f30d3360a96 246 SMART SM00448 5 117 7.3E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS11430 497703d6745812d9a11c5f30d3360a96 246 Pfam PF00486 Transcriptional regulatory protein, C terminal 162 235 1.1E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS11430 497703d6745812d9a11c5f30d3360a96 246 SUPERFAMILY SSF46894 136 236 3.68E-23 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS11700 95c1d83511070a1c8afd347c56db5809 67 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 1 65 5.2E-34 T 22-04-2016 IPR017704 Putative selenium-binding protein YdfZ APT61_RS11700 95c1d83511070a1c8afd347c56db5809 67 Pfam PF14001 YdfZ protein 2 65 1.6E-33 T 22-04-2016 IPR017704 Putative selenium-binding protein YdfZ APT61_RS16230 ccc421e661506e2f6b5302af00fc234a 95 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 90 1.4E-8 T 22-04-2016 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 APT61_RS13945 cd1057e5fee0ff76e30b9a1a92e58196 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 5.8E-23 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS13945 cd1057e5fee0ff76e30b9a1a92e58196 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 1.6E-84 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS13945 cd1057e5fee0ff76e30b9a1a92e58196 477 SUPERFAMILY SSF55604 401 474 2.48E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS13945 cd1057e5fee0ff76e30b9a1a92e58196 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS13945 cd1057e5fee0ff76e30b9a1a92e58196 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 7.6E-91 T 22-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 APT61_RS13945 cd1057e5fee0ff76e30b9a1a92e58196 477 PANTHER PTHR30009 6 477 5.2E-261 T 22-04-2016 APT61_RS13945 cd1057e5fee0ff76e30b9a1a92e58196 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 2.1E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS13945 cd1057e5fee0ff76e30b9a1a92e58196 477 PANTHER PTHR30009:SF2 6 477 5.2E-261 T 22-04-2016 APT61_RS13945 cd1057e5fee0ff76e30b9a1a92e58196 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 1.3E-233 T 22-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS13945 cd1057e5fee0ff76e30b9a1a92e58196 477 Gene3D G3DSA:3.30.1360.60 399 474 2.1E-27 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS16970 a4b40a923f7cbb9e24e6a00d1e169272 173 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 164 6.4E-34 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 Gene3D G3DSA:1.10.287.950 279 483 1.3E-56 T 22-04-2016 APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 SUPERFAMILY SSF47170 31 173 9.81E-9 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 SMART SM00283 264 511 1.5E-84 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 Gene3D G3DSA:1.20.120.30 63 144 4.2E-4 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 Pfam PF02203 Tar ligand binding domain homologue 8 162 1.1E-10 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 PANTHER PTHR32089 160 514 2.8E-130 T 22-04-2016 APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 SUPERFAMILY SSF58104 238 512 1.57E-64 T 22-04-2016 APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 Pfam PF00672 HAMP domain 190 258 3.0E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 362 389 1.1E-50 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 285 314 1.1E-50 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 439 468 1.1E-50 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 391 420 1.1E-50 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 510 2.8E-57 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 SMART SM00304 209 263 7.9E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS11240 41619a2f55f96d062f8f02c569e58b8a 516 PANTHER PTHR32089:SF48 160 514 2.8E-130 T 22-04-2016 APT61_RS06780 4b0af4142092fcb1ab8a05fb87b10923 180 PIRSF PIRSF017340 2 172 4.5E-71 T 22-04-2016 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 APT61_RS06780 4b0af4142092fcb1ab8a05fb87b10923 180 SUPERFAMILY SSF55811 10 166 7.85E-36 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS06780 4b0af4142092fcb1ab8a05fb87b10923 180 PANTHER PTHR22769 1 176 4.2E-122 T 22-04-2016 APT61_RS06780 4b0af4142092fcb1ab8a05fb87b10923 180 Gene3D G3DSA:3.90.79.10 6 173 4.0E-62 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS06780 4b0af4142092fcb1ab8a05fb87b10923 180 PANTHER PTHR22769:SF25 1 176 4.2E-122 T 22-04-2016 APT61_RS06780 4b0af4142092fcb1ab8a05fb87b10923 180 Pfam PF00293 NUDIX domain 37 153 1.0E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APT61_RS16065 d0e0618f31eb08461cbfe034a929f768 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 3.4E-110 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APT61_RS16065 d0e0618f31eb08461cbfe034a929f768 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 2.8E-201 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APT61_RS16065 d0e0618f31eb08461cbfe034a929f768 379 PIRSF PIRSF000267 2 378 3.8E-133 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APT61_RS16065 d0e0618f31eb08461cbfe034a929f768 379 PANTHER PTHR30365 1 379 1.2E-199 T 22-04-2016 APT61_RS16065 d0e0618f31eb08461cbfe034a929f768 379 PANTHER PTHR30365:SF6 1 379 1.2E-199 T 22-04-2016 APT61_RS12060 438a5453542901b646d7ccdc1e430822 109 Pfam PF00893 Small Multidrug Resistance protein 5 99 1.7E-28 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 APT61_RS12060 438a5453542901b646d7ccdc1e430822 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 34.55 T 22-04-2016 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 APT61_RS12060 438a5453542901b646d7ccdc1e430822 109 SUPERFAMILY SSF103481 12 108 4.84E-17 T 22-04-2016 APT61_RS12060 438a5453542901b646d7ccdc1e430822 109 PANTHER PTHR30561 5 109 1.3E-67 T 22-04-2016 APT61_RS12060 438a5453542901b646d7ccdc1e430822 109 PANTHER PTHR30561:SF6 5 109 1.3E-67 T 22-04-2016 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 APT61_RS10605 5085b3527e37329e6c2fa041d4c360c0 225 Pfam PF11769 Protein of unknown function (DUF3313) 17 213 5.0E-55 T 22-04-2016 IPR021747 Protein of unknown function DUF3313 APT61_RS21165 cc0b86ed54e8bd5be36a5ed96fefee40 66 PANTHER PTHR34472 1 66 5.8E-22 T 22-04-2016 APT61_RS21165 cc0b86ed54e8bd5be36a5ed96fefee40 66 Gene3D G3DSA:3.10.20.30 1 66 7.2E-22 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS21165 cc0b86ed54e8bd5be36a5ed96fefee40 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 66 3.7E-19 T 22-04-2016 IPR010035 ThiS, thiamine-biosynthesis APT61_RS21165 cc0b86ed54e8bd5be36a5ed96fefee40 66 PANTHER PTHR34472:SF1 1 66 5.8E-22 T 22-04-2016 APT61_RS21165 cc0b86ed54e8bd5be36a5ed96fefee40 66 SUPERFAMILY SSF54285 1 66 2.18E-16 T 22-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp APT61_RS21165 cc0b86ed54e8bd5be36a5ed96fefee40 66 Pfam PF02597 ThiS family 3 66 6.6E-13 T 22-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 APT61_RS17320 2c2740f48fbe9b5864def82f86bf757e 207 Gene3D G3DSA:3.90.226.10 16 205 1.1E-90 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS17320 2c2740f48fbe9b5864def82f86bf757e 207 SUPERFAMILY SSF52096 23 206 1.29E-75 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS17320 2c2740f48fbe9b5864def82f86bf757e 207 Pfam PF00574 Clp protease 25 205 4.2E-89 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APT61_RS17320 2c2740f48fbe9b5864def82f86bf757e 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 5.5E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APT61_RS17320 2c2740f48fbe9b5864def82f86bf757e 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 5.5E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APT61_RS17320 2c2740f48fbe9b5864def82f86bf757e 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 5.5E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APT61_RS17320 2c2740f48fbe9b5864def82f86bf757e 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 5.5E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APT61_RS17320 2c2740f48fbe9b5864def82f86bf757e 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 5.5E-54 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APT61_RS17320 2c2740f48fbe9b5864def82f86bf757e 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 44.914 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APT61_RS17320 2c2740f48fbe9b5864def82f86bf757e 207 PANTHER PTHR10381:SF22 2 207 3.6E-145 T 22-04-2016 APT61_RS17320 2c2740f48fbe9b5864def82f86bf757e 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 22-04-2016 IPR018215 ClpP, Ser active site APT61_RS17320 2c2740f48fbe9b5864def82f86bf757e 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 1.0E-111 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APT61_RS17320 2c2740f48fbe9b5864def82f86bf757e 207 PANTHER PTHR10381 2 207 3.6E-145 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APT61_RS17320 2c2740f48fbe9b5864def82f86bf757e 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 22-04-2016 IPR033135 ClpP, histidine active site APT61_RS20215 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS20215 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 8 74 1.1E-32 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS20215 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS20215 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS20215 4d776f2becc435db4210658806b3f9df 75 PANTHER PTHR13479 2 74 1.6E-34 T 22-04-2016 APT61_RS20215 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 7.8E-25 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS20215 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS20215 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS20215 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS20215 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS20215 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS20215 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS13440 c51641e12c0c44078328efb81ddf941e 678 SUPERFAMILY SSF56935 37 678 1.5E-83 T 22-04-2016 APT61_RS13440 c51641e12c0c44078328efb81ddf941e 678 TIGRFAM TIGR01778 TonB-copper: TonB-dependent copper receptor 51 678 2.2E-244 T 22-04-2016 IPR010100 TonB-dependent copper receptor APT61_RS13440 c51641e12c0c44078328efb81ddf941e 678 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 150 3.3E-9 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS13440 c51641e12c0c44078328efb81ddf941e 678 Gene3D G3DSA:2.170.130.10 48 151 2.9E-11 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS13440 c51641e12c0c44078328efb81ddf941e 678 PANTHER PTHR32552:SF12 17 678 7.7E-232 T 22-04-2016 APT61_RS13440 c51641e12c0c44078328efb81ddf941e 678 Gene3D G3DSA:2.40.170.20 152 678 1.3E-73 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS13440 c51641e12c0c44078328efb81ddf941e 678 Pfam PF00593 TonB dependent receptor 438 677 4.4E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS13440 c51641e12c0c44078328efb81ddf941e 678 PANTHER PTHR32552 17 678 7.7E-232 T 22-04-2016 APT61_RS13635 58b7e8c23d50ed621ff6847a4611b21b 643 PANTHER PTHR10381 1 234 9.7E-88 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APT61_RS13635 58b7e8c23d50ed621ff6847a4611b21b 643 SUPERFAMILY SSF52096 7 175 9.12E-51 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS13635 58b7e8c23d50ed621ff6847a4611b21b 643 PRINTS PR00127 Clp protease catalytic subunit P signature 70 87 1.9E-9 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APT61_RS13635 58b7e8c23d50ed621ff6847a4611b21b 643 PRINTS PR00127 Clp protease catalytic subunit P signature 146 165 1.9E-9 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APT61_RS13635 58b7e8c23d50ed621ff6847a4611b21b 643 PRINTS PR00127 Clp protease catalytic subunit P signature 39 59 1.9E-9 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 APT61_RS13635 58b7e8c23d50ed621ff6847a4611b21b 643 Gene3D G3DSA:3.90.226.10 5 178 2.8E-49 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS13635 58b7e8c23d50ed621ff6847a4611b21b 643 PANTHER PTHR10381:SF23 1 234 9.7E-88 T 22-04-2016 APT61_RS13635 58b7e8c23d50ed621ff6847a4611b21b 643 Pfam PF00574 Clp protease 7 168 6.6E-40 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA APT61_RS16285 7ad79ef3f409a3193f4038eadf9b2865 554 SUPERFAMILY SSF56235 1 196 2.32E-56 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS16285 7ad79ef3f409a3193f4038eadf9b2865 554 Pfam PF13537 Glutamine amidotransferase domain 48 166 1.6E-41 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain APT61_RS16285 7ad79ef3f409a3193f4038eadf9b2865 554 Pfam PF00733 Asparagine synthase 367 511 2.9E-41 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 APT61_RS16285 7ad79ef3f409a3193f4038eadf9b2865 554 Pfam PF00733 Asparagine synthase 211 366 1.8E-58 T 22-04-2016 IPR001962 Asparagine synthase GO:0004066|GO:0006529 APT61_RS16285 7ad79ef3f409a3193f4038eadf9b2865 554 SUPERFAMILY SSF52402 212 480 4.19E-75 T 22-04-2016 APT61_RS16285 7ad79ef3f409a3193f4038eadf9b2865 554 PANTHER PTHR11772:SF11 2 538 0.0 T 22-04-2016 APT61_RS16285 7ad79ef3f409a3193f4038eadf9b2865 554 PANTHER PTHR11772 2 538 0.0 T 22-04-2016 APT61_RS16285 7ad79ef3f409a3193f4038eadf9b2865 554 Gene3D G3DSA:3.60.20.10 1 192 5.8E-67 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS16285 7ad79ef3f409a3193f4038eadf9b2865 554 Gene3D G3DSA:3.40.50.620 193 510 7.5E-119 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS16285 7ad79ef3f409a3193f4038eadf9b2865 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 373 1.1E-123 T 22-04-2016 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|UniPathway: UPA00134 APT61_RS20935 796779b64ecdf68fce923221858cf372 69 Pfam PF05532 CsbD-like 4 56 3.0E-22 T 22-04-2016 IPR008462 CsbD-like APT61_RS20935 796779b64ecdf68fce923221858cf372 69 PANTHER PTHR34977 1 69 5.9E-18 T 22-04-2016 APT61_RS20935 796779b64ecdf68fce923221858cf372 69 Gene3D G3DSA:1.10.1470.10 1 67 6.2E-33 T 22-04-2016 IPR008462 CsbD-like APT61_RS20935 796779b64ecdf68fce923221858cf372 69 SUPERFAMILY SSF69047 1 69 1.02E-27 T 22-04-2016 IPR008462 CsbD-like APT61_RS20935 796779b64ecdf68fce923221858cf372 69 PIRSF PIRSF039008 1 66 6.4E-33 T 22-04-2016 IPR026042 Stress response protein YjbJ APT61_RS07525 8e551884562c08a7ddea33b4a906b68c 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 299 2.2E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07525 8e551884562c08a7ddea33b4a906b68c 301 PANTHER PTHR30465:SF10 18 301 2.2E-112 T 22-04-2016 APT61_RS07525 8e551884562c08a7ddea33b4a906b68c 301 SUPERFAMILY SSF161098 95 282 1.44E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07525 8e551884562c08a7ddea33b4a906b68c 301 PANTHER PTHR30465 18 301 2.2E-112 T 22-04-2016 APT61_RS07525 8e551884562c08a7ddea33b4a906b68c 301 Gene3D G3DSA:1.10.3720.10 92 298 2.0E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07525 8e551884562c08a7ddea33b4a906b68c 301 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 35 77 1.3E-8 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT61_RS09110 f2dca6058416c63b1eebbb1f17680c7c 190 PANTHER PTHR37943 1 126 3.3E-31 T 22-04-2016 APT61_RS09110 f2dca6058416c63b1eebbb1f17680c7c 190 Gene3D G3DSA:2.60.120.10 9 112 9.2E-30 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS09110 f2dca6058416c63b1eebbb1f17680c7c 190 Pfam PF05962 HutD 12 159 5.9E-38 T 22-04-2016 IPR010282 Uncharacterised protein family HutD/Ves APT61_RS09110 f2dca6058416c63b1eebbb1f17680c7c 190 SUPERFAMILY SSF51182 1 173 1.25E-41 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS09110 f2dca6058416c63b1eebbb1f17680c7c 190 PANTHER PTHR37943:SF1 1 126 3.3E-31 T 22-04-2016 APT61_RS13010 67aa26f72ed6c93dfb50edcb409f198f 99 SMART SM00411 3 92 1.2E-43 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS13010 67aa26f72ed6c93dfb50edcb409f198f 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.158 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 APT61_RS13010 67aa26f72ed6c93dfb50edcb409f198f 99 SUPERFAMILY SSF47729 3 93 1.31E-31 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APT61_RS13010 67aa26f72ed6c93dfb50edcb409f198f 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS13010 67aa26f72ed6c93dfb50edcb409f198f 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS13010 67aa26f72ed6c93dfb50edcb409f198f 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS13010 67aa26f72ed6c93dfb50edcb409f198f 99 Gene3D G3DSA:4.10.520.10 2 93 3.4E-36 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 APT61_RS13010 67aa26f72ed6c93dfb50edcb409f198f 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.7E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 APT61_RS13010 67aa26f72ed6c93dfb50edcb409f198f 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 4.6E-55 T 22-04-2016 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355|GO:0006417 APT61_RS13010 67aa26f72ed6c93dfb50edcb409f198f 99 PANTHER PTHR33175 2 99 2.6E-57 T 22-04-2016 APT61_RS13010 67aa26f72ed6c93dfb50edcb409f198f 99 PANTHER PTHR33175:SF2 2 99 2.6E-57 T 22-04-2016 APT61_RS13010 67aa26f72ed6c93dfb50edcb409f198f 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 22-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 APT61_RS10075 ff110b8e876ff5357af410791fd15716 440 PANTHER PTHR24095 61 354 1.1E-200 T 22-04-2016 APT61_RS10075 ff110b8e876ff5357af410791fd15716 440 SUPERFAMILY SSF56801 21 396 6.41E-61 T 22-04-2016 APT61_RS10075 ff110b8e876ff5357af410791fd15716 440 Gene3D G3DSA:3.30.300.30 328 435 5.3E-36 T 22-04-2016 APT61_RS10075 ff110b8e876ff5357af410791fd15716 440 TIGRFAM TIGR02155 PA_CoA_ligase: phenylacetate-CoA ligase 13 434 2.9E-234 T 22-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 APT61_RS10075 ff110b8e876ff5357af410791fd15716 440 Pfam PF14535 AMP-binding enzyme C-terminal domain 338 434 3.3E-26 T 22-04-2016 IPR028154 AMP-dependent ligase, C-terminal APT61_RS10075 ff110b8e876ff5357af410791fd15716 440 Pfam PF00501 AMP-binding enzyme 82 291 2.8E-16 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APT61_RS10075 ff110b8e876ff5357af410791fd15716 440 Gene3D G3DSA:3.40.50.980 91 247 1.7E-14 T 22-04-2016 APT61_RS10075 ff110b8e876ff5357af410791fd15716 440 PANTHER PTHR24095:SF175 61 354 1.1E-200 T 22-04-2016 APT61_RS10075 ff110b8e876ff5357af410791fd15716 440 PIRSF PIRSF006444 1 436 1.2E-206 T 22-04-2016 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716|UniPathway: UPA00930 APT61_RS17605 3f2f2bf218eccc8dcfcf3402ac68929a 72 Pfam PF10953 Protein of unknown function (DUF2754) 1 68 2.9E-46 T 22-04-2016 IPR020490 Uncharacterised protein family YaiZ APT61_RS17605 3f2f2bf218eccc8dcfcf3402ac68929a 72 ProDom PD073772 MEMBRANE TRANSMEMBRANE YAIZ INNER ECS0430 GENOME 1 66 6.0E-29 T 22-04-2016 IPR020490 Uncharacterised protein family YaiZ APT61_RS20890 6ab7c399c21b99b8bda01234c8589ef3 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 4.2E-37 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APT61_RS20890 6ab7c399c21b99b8bda01234c8589ef3 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 4.2E-37 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APT61_RS20890 6ab7c399c21b99b8bda01234c8589ef3 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 4.2E-37 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APT61_RS20890 6ab7c399c21b99b8bda01234c8589ef3 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 4.2E-37 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APT61_RS20890 6ab7c399c21b99b8bda01234c8589ef3 397 Gene3D G3DSA:3.40.640.10 46 316 2.9E-103 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS20890 6ab7c399c21b99b8bda01234c8589ef3 397 SUPERFAMILY SSF53383 2 396 1.36E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS20890 6ab7c399c21b99b8bda01234c8589ef3 397 Pfam PF00155 Aminotransferase class I and II 27 392 8.2E-85 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS20890 6ab7c399c21b99b8bda01234c8589ef3 397 PANTHER PTHR11879 1 397 0.0 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APT61_RS20890 6ab7c399c21b99b8bda01234c8589ef3 397 PANTHER PTHR11879:SF7 1 397 0.0 T 22-04-2016 APT61_RS20890 6ab7c399c21b99b8bda01234c8589ef3 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APT61_RS13150 882411f61f626e67fa10831fb695a695 185 PANTHER PTHR37943:SF1 1 182 2.7E-54 T 22-04-2016 APT61_RS13150 882411f61f626e67fa10831fb695a695 185 Pfam PF05962 HutD 5 175 1.6E-47 T 22-04-2016 IPR010282 Uncharacterised protein family HutD/Ves APT61_RS13150 882411f61f626e67fa10831fb695a695 185 PANTHER PTHR37943 1 182 2.7E-54 T 22-04-2016 APT61_RS13150 882411f61f626e67fa10831fb695a695 185 Gene3D G3DSA:2.60.120.10 8 114 1.7E-34 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS13150 882411f61f626e67fa10831fb695a695 185 SUPERFAMILY SSF51182 1 183 3.26E-49 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS01645 ef80cf0819a0d884487354868b40373a 815 PIRSF PIRSF000460 2 815 7.6E-233 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APT61_RS01645 ef80cf0819a0d884487354868b40373a 815 PANTHER PTHR11468 15 815 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APT61_RS01645 ef80cf0819a0d884487354868b40373a 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 15 810 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APT61_RS01645 ef80cf0819a0d884487354868b40373a 815 PANTHER PTHR11468:SF3 15 815 0.0 T 22-04-2016 APT61_RS01645 ef80cf0819a0d884487354868b40373a 815 SUPERFAMILY SSF53756 9 814 0.0 T 22-04-2016 APT61_RS01645 ef80cf0819a0d884487354868b40373a 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APT61_RS01645 ef80cf0819a0d884487354868b40373a 815 Gene3D G3DSA:3.40.50.2000 12 479 4.8E-209 T 22-04-2016 APT61_RS01645 ef80cf0819a0d884487354868b40373a 815 Gene3D G3DSA:3.40.50.2000 480 795 3.3E-141 T 22-04-2016 APT61_RS01645 ef80cf0819a0d884487354868b40373a 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 APT61_RS17530 62f628f92e6244269be7334595946cbd 301 PANTHER PTHR18964:SF123 3 299 4.2E-101 T 22-04-2016 APT61_RS17530 62f628f92e6244269be7334595946cbd 301 SUPERFAMILY SSF53067 3 299 6.7E-63 T 22-04-2016 APT61_RS17530 62f628f92e6244269be7334595946cbd 301 ProSitePatterns PS01125 ROK family signature. 130 157 - T 22-04-2016 IPR000600 ROK family APT61_RS17530 62f628f92e6244269be7334595946cbd 301 PANTHER PTHR18964 3 299 4.2E-101 T 22-04-2016 APT61_RS17530 62f628f92e6244269be7334595946cbd 301 Gene3D G3DSA:3.30.420.40 2 131 2.6E-37 T 22-04-2016 APT61_RS17530 62f628f92e6244269be7334595946cbd 301 Gene3D G3DSA:3.30.420.40 132 280 6.2E-49 T 22-04-2016 APT61_RS17530 62f628f92e6244269be7334595946cbd 301 Pfam PF00480 ROK family 3 300 3.3E-95 T 22-04-2016 IPR000600 ROK family APT61_RS06450 50f43903c7530d509dfc1fde2d12befb 413 PANTHER PTHR11706:SF42 3 413 1.6E-252 T 22-04-2016 APT61_RS06450 50f43903c7530d509dfc1fde2d12befb 413 PANTHER PTHR11706 3 413 1.6E-252 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APT61_RS06450 50f43903c7530d509dfc1fde2d12befb 413 Pfam PF01566 Natural resistance-associated macrophage protein 39 384 2.4E-126 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APT61_RS06450 50f43903c7530d509dfc1fde2d12befb 413 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 3 410 38.167 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APT61_RS06450 50f43903c7530d509dfc1fde2d12befb 413 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 21 378 1.5E-99 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APT61_RS06450 50f43903c7530d509dfc1fde2d12befb 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 201 224 9.9E-30 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APT61_RS06450 50f43903c7530d509dfc1fde2d12befb 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 300 319 9.9E-30 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APT61_RS06450 50f43903c7530d509dfc1fde2d12befb 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 126 145 9.9E-30 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APT61_RS06450 50f43903c7530d509dfc1fde2d12befb 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 98 124 9.9E-30 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APT61_RS06450 50f43903c7530d509dfc1fde2d12befb 413 PRINTS PR00447 Natural resistance-associated macrophage protein signature 151 172 9.9E-30 T 22-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 APT61_RS03290 2dcc6992066bbad6f2593cabd9338822 550 SUPERFAMILY SSF52540 4 171 8.27E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15705 fe01a22613e19a338e50d0ff6c902c19 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 2.2E-16 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS15705 fe01a22613e19a338e50d0ff6c902c19 86 PANTHER PTHR34156:SF1 2 86 9.7E-41 T 22-04-2016 APT61_RS15705 fe01a22613e19a338e50d0ff6c902c19 86 Gene3D G3DSA:3.30.1660.10 18 86 7.3E-27 T 22-04-2016 IPR025543 Dodecin-like APT61_RS15705 fe01a22613e19a338e50d0ff6c902c19 86 SUPERFAMILY SSF159871 3 86 4.58E-24 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS15705 fe01a22613e19a338e50d0ff6c902c19 86 PANTHER PTHR34156 2 86 9.7E-41 T 22-04-2016 APT61_RS22180 a507ed89d6ad0858ce2af5d4cb99dc1d 609 SUPERFAMILY SSF53697 245 609 6.77E-115 T 22-04-2016 APT61_RS22180 a507ed89d6ad0858ce2af5d4cb99dc1d 609 Gene3D G3DSA:3.60.20.10 2 237 2.6E-79 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS22180 a507ed89d6ad0858ce2af5d4cb99dc1d 609 Pfam PF13522 Glutamine amidotransferase domain 65 175 1.6E-21 T 22-04-2016 APT61_RS22180 a507ed89d6ad0858ce2af5d4cb99dc1d 609 PANTHER PTHR10937 1 609 0.0 T 22-04-2016 APT61_RS22180 a507ed89d6ad0858ce2af5d4cb99dc1d 609 Gene3D G3DSA:3.40.50.10490 445 609 1.8E-69 T 22-04-2016 APT61_RS22180 a507ed89d6ad0858ce2af5d4cb99dc1d 609 Pfam PF01380 SIS domain 462 591 6.6E-29 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APT61_RS22180 a507ed89d6ad0858ce2af5d4cb99dc1d 609 Pfam PF01380 SIS domain 289 418 4.8E-33 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APT61_RS22180 a507ed89d6ad0858ce2af5d4cb99dc1d 609 Gene3D G3DSA:3.40.50.10490 245 444 8.1E-67 T 22-04-2016 APT61_RS22180 a507ed89d6ad0858ce2af5d4cb99dc1d 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 41.397 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APT61_RS22180 a507ed89d6ad0858ce2af5d4cb99dc1d 609 SUPERFAMILY SSF56235 2 232 3.6E-75 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS22180 a507ed89d6ad0858ce2af5d4cb99dc1d 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 5.1E-268 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APT61_RS22180 a507ed89d6ad0858ce2af5d4cb99dc1d 609 PANTHER PTHR10937:SF0 1 609 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 APT61_RS17730 e303a8491c817d46adc7305a1d8889eb 522 PANTHER PTHR34987 52 520 2.0E-34 T 22-04-2016 APT61_RS17730 e303a8491c817d46adc7305a1d8889eb 522 Pfam PF05592 Bacterial alpha-L-rhamnosidase 74 517 9.9E-23 T 22-04-2016 IPR008902 Bacterial alpha-L-rhamnosidase APT61_RS17730 e303a8491c817d46adc7305a1d8889eb 522 SUPERFAMILY SSF48208 216 520 9.07E-35 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APT61_RS18565 1658e6ae93e9b37b393cd85c48142e07 130 Pfam PF00293 NUDIX domain 6 125 1.7E-21 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APT61_RS18565 1658e6ae93e9b37b393cd85c48142e07 130 PRINTS PR01401 Mutator MutT protein signature 77 90 2.0E-14 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 APT61_RS18565 1658e6ae93e9b37b393cd85c48142e07 130 PRINTS PR01401 Mutator MutT protein signature 2 23 2.0E-14 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 APT61_RS18565 1658e6ae93e9b37b393cd85c48142e07 130 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 126 1.1E-60 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 APT61_RS18565 1658e6ae93e9b37b393cd85c48142e07 130 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APT61_RS18565 1658e6ae93e9b37b393cd85c48142e07 130 PANTHER PTHR22769:SF36 1 127 1.3E-76 T 22-04-2016 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 APT61_RS18565 1658e6ae93e9b37b393cd85c48142e07 130 Gene3D G3DSA:3.90.79.10 3 126 2.1E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS18565 1658e6ae93e9b37b393cd85c48142e07 130 PRINTS PR00502 NUDIX hydrolase family signature 33 47 4.1E-10 T 22-04-2016 IPR020476 NUDIX hydrolase APT61_RS18565 1658e6ae93e9b37b393cd85c48142e07 130 PRINTS PR00502 NUDIX hydrolase family signature 47 62 4.1E-10 T 22-04-2016 IPR020476 NUDIX hydrolase APT61_RS18565 1658e6ae93e9b37b393cd85c48142e07 130 PANTHER PTHR22769 1 127 1.3E-76 T 22-04-2016 APT61_RS18565 1658e6ae93e9b37b393cd85c48142e07 130 SUPERFAMILY SSF55811 1 126 1.0E-35 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS00350 6d8a54f7539bed5d858e17bbc1672e91 195 SUPERFAMILY SSF53706 35 195 5.89E-58 T 22-04-2016 APT61_RS00350 6d8a54f7539bed5d858e17bbc1672e91 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APT61_RS00350 6d8a54f7539bed5d858e17bbc1672e91 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 3.7E-19 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS00350 6d8a54f7539bed5d858e17bbc1672e91 195 Pfam PF00384 Molybdopterin oxidoreductase 107 161 1.9E-6 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS00350 6d8a54f7539bed5d858e17bbc1672e91 195 PANTHER PTHR11615 41 195 9.7E-125 T 22-04-2016 APT61_RS00350 6d8a54f7539bed5d858e17bbc1672e91 195 PANTHER PTHR11615:SF149 41 195 9.7E-125 T 22-04-2016 APT61_RS00350 6d8a54f7539bed5d858e17bbc1672e91 195 Gene3D G3DSA:3.40.50.740 109 175 8.1E-16 T 22-04-2016 APT61_RS00350 6d8a54f7539bed5d858e17bbc1672e91 195 SMART SM00926 43 104 4.9E-22 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS00350 6d8a54f7539bed5d858e17bbc1672e91 195 Gene3D G3DSA:2.20.25.90 37 108 6.5E-25 T 22-04-2016 APT61_RS01375 623e457eeef0fde81091af220aa023b1 563 PANTHER PTHR10859:SF84 8 285 6.6E-78 T 22-04-2016 APT61_RS01375 623e457eeef0fde81091af220aa023b1 563 SUPERFAMILY SSF53448 8 239 8.66E-32 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS01375 623e457eeef0fde81091af220aa023b1 563 PANTHER PTHR10859 8 285 6.6E-78 T 22-04-2016 APT61_RS01375 623e457eeef0fde81091af220aa023b1 563 Gene3D G3DSA:3.90.550.10 9 139 1.8E-12 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS01375 623e457eeef0fde81091af220aa023b1 563 Pfam PF00535 Glycosyl transferase family 2 8 134 3.0E-19 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APT61_RS19540 a0f89495048a66d8dc630c5433957295 426 PANTHER PTHR38442 1 421 8.2E-159 T 22-04-2016 APT61_RS19540 a0f89495048a66d8dc630c5433957295 426 Pfam PF04286 Protein of unknown function (DUF445) 44 417 1.9E-107 T 22-04-2016 IPR007383 Protein of unknown function DUF445 APT61_RS00880 a9e13a3945484c07fd88d2c52c4c185e 416 PANTHER PTHR30250:SF9 3 415 6.7E-173 T 22-04-2016 APT61_RS00880 a9e13a3945484c07fd88d2c52c4c185e 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 4.1E-10 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 APT61_RS00880 a9e13a3945484c07fd88d2c52c4c185e 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 40.703 T 22-04-2016 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 UniPathway: UPA00566 APT61_RS00880 a9e13a3945484c07fd88d2c52c4c185e 416 PANTHER PTHR30250 3 415 6.7E-173 T 22-04-2016 APT61_RS21750 ff0edddc80306d6df699082ef68a4a7a 229 PANTHER PTHR12029 1 189 6.5E-76 T 22-04-2016 APT61_RS21750 ff0edddc80306d6df699082ef68a4a7a 229 Gene3D G3DSA:3.40.1280.10 3 176 6.0E-50 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT61_RS21750 ff0edddc80306d6df699082ef68a4a7a 229 PANTHER PTHR12029:SF45 1 189 6.5E-76 T 22-04-2016 APT61_RS21750 ff0edddc80306d6df699082ef68a4a7a 229 SUPERFAMILY SSF75217 4 181 1.77E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APT61_RS21750 ff0edddc80306d6df699082ef68a4a7a 229 Pfam PF00588 SpoU rRNA Methylase family 20 159 2.2E-36 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APT61_RS21750 ff0edddc80306d6df699082ef68a4a7a 229 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 1.1E-24 T 22-04-2016 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 APT61_RS03115 4fb73c881fe96fee812cddea659e6245 495 PANTHER PTHR24220 6 379 1.2E-193 T 22-04-2016 APT61_RS03115 4fb73c881fe96fee812cddea659e6245 495 SUPERFAMILY SSF52540 4 223 1.78E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03115 4fb73c881fe96fee812cddea659e6245 495 Pfam PF00005 ABC transporter 274 422 7.0E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS03115 4fb73c881fe96fee812cddea659e6245 495 Pfam PF00005 ABC transporter 20 162 3.7E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS03115 4fb73c881fe96fee812cddea659e6245 495 SMART SM00382 29 210 1.3E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS03115 4fb73c881fe96fee812cddea659e6245 495 SMART SM00382 281 471 1.0E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS03115 4fb73c881fe96fee812cddea659e6245 495 Gene3D G3DSA:3.40.50.300 2 224 1.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03115 4fb73c881fe96fee812cddea659e6245 495 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS03115 4fb73c881fe96fee812cddea659e6245 495 SUPERFAMILY SSF52540 274 473 1.54E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03115 4fb73c881fe96fee812cddea659e6245 495 Gene3D G3DSA:3.40.50.300 274 481 2.9E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03115 4fb73c881fe96fee812cddea659e6245 495 PANTHER PTHR24220:SF555 6 379 1.2E-193 T 22-04-2016 IPR030281 Autoinducer 2 import ATP-binding protein LsrA GO:0005524|GO:0006810|GO:0016021|GO:0042626 KEGG: 00920+3.6.3.- APT61_RS14815 3385d7fc1e9faa770f24fddd20c3f40c 369 SUPERFAMILY SSF54292 287 368 1.04E-18 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS14815 3385d7fc1e9faa770f24fddd20c3f40c 369 Gene3D G3DSA:3.10.20.30 279 368 6.6E-21 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS14815 3385d7fc1e9faa770f24fddd20c3f40c 369 Pfam PF03476 MOSC N-terminal beta barrel domain 2 116 4.9E-28 T 22-04-2016 IPR005303 MOSC, N-terminal beta barrel APT61_RS14815 3385d7fc1e9faa770f24fddd20c3f40c 369 Pfam PF03473 MOSC domain 139 262 4.3E-30 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 APT61_RS14815 3385d7fc1e9faa770f24fddd20c3f40c 369 SUPERFAMILY SSF141673 4 132 6.54E-29 T 22-04-2016 APT61_RS14815 3385d7fc1e9faa770f24fddd20c3f40c 369 PANTHER PTHR14237 1 267 7.9E-97 T 22-04-2016 APT61_RS14815 3385d7fc1e9faa770f24fddd20c3f40c 369 SUPERFAMILY SSF50800 147 264 3.45E-16 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain APT61_RS14815 3385d7fc1e9faa770f24fddd20c3f40c 369 SUPERFAMILY SSF50800 3 50 3.45E-16 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain APT61_RS14815 3385d7fc1e9faa770f24fddd20c3f40c 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 294 362 4.5E-11 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS14855 6267661d840311e4c977d5ecca118909 870 SUPERFAMILY SSF63737 1 193 5.1E-46 T 22-04-2016 APT61_RS14855 6267661d840311e4c977d5ecca118909 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 1.1E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APT61_RS14855 6267661d840311e4c977d5ecca118909 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 1.1E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APT61_RS14855 6267661d840311e4c977d5ecca118909 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 1.1E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APT61_RS14855 6267661d840311e4c977d5ecca118909 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 1.1E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APT61_RS14855 6267661d840311e4c977d5ecca118909 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 1.1E-8 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APT61_RS14855 6267661d840311e4c977d5ecca118909 870 Pfam PF11940 Domain of unknown function (DUF3458) 459 827 4.8E-138 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal APT61_RS14855 6267661d840311e4c977d5ecca118909 870 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 22-04-2016 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 APT61_RS14855 6267661d840311e4c977d5ecca118909 870 PANTHER PTHR11533:SF152 609 869 0.0 T 22-04-2016 APT61_RS14855 6267661d840311e4c977d5ecca118909 870 PANTHER PTHR11533:SF152 12 586 0.0 T 22-04-2016 APT61_RS14855 6267661d840311e4c977d5ecca118909 870 PANTHER PTHR11533 609 869 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 APT61_RS14855 6267661d840311e4c977d5ecca118909 870 PANTHER PTHR11533 12 586 0.0 T 22-04-2016 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase GO:0006508 APT61_RS14855 6267661d840311e4c977d5ecca118909 870 Pfam PF01433 Peptidase family M1 72 384 3.0E-68 T 22-04-2016 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 APT61_RS14855 6267661d840311e4c977d5ecca118909 870 Gene3D G3DSA:1.10.390.10 308 451 4.2E-35 T 22-04-2016 APT61_RS14855 6267661d840311e4c977d5ecca118909 870 Gene3D G3DSA:1.25.50.10 547 870 4.6E-126 T 22-04-2016 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal APT61_RS14855 6267661d840311e4c977d5ecca118909 870 SUPERFAMILY SSF55486 204 450 5.86E-74 T 22-04-2016 APT61_RS17475 457a4a1a8b3c377546f8c166bdd5cc98 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 1.3E-92 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS17475 457a4a1a8b3c377546f8c166bdd5cc98 375 PANTHER PTHR21148 1 368 2.6E-185 T 22-04-2016 APT61_RS17475 457a4a1a8b3c377546f8c166bdd5cc98 375 Gene3D G3DSA:3.20.20.105 1 367 2.8E-169 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS17475 457a4a1a8b3c377546f8c166bdd5cc98 375 SUPERFAMILY SSF51713 1 364 6.15E-162 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS17475 457a4a1a8b3c377546f8c166bdd5cc98 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 369 4.8E-190 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS17475 457a4a1a8b3c377546f8c166bdd5cc98 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 369 6.2E-180 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS17475 457a4a1a8b3c377546f8c166bdd5cc98 375 PANTHER PTHR21148:SF26 1 368 2.6E-185 T 22-04-2016 APT61_RS17475 457a4a1a8b3c377546f8c166bdd5cc98 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 359 58.29 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS01420 094305cdb4c40087227cc1a4c55bb973 357 Pfam PF01594 Domain of unknown function DUF20 22 336 3.7E-80 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APT61_RS01420 094305cdb4c40087227cc1a4c55bb973 357 PANTHER PTHR21716 22 356 4.1E-200 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APT61_RS01420 094305cdb4c40087227cc1a4c55bb973 357 PANTHER PTHR21716:SF17 22 356 4.1E-200 T 22-04-2016 APT61_RS03105 f04201cd2f11f926ef5b3fa81ea2a454 527 SUPERFAMILY SSF53067 252 502 1.62E-48 T 22-04-2016 APT61_RS03105 f04201cd2f11f926ef5b3fa81ea2a454 527 PANTHER PTHR10196 3 514 0.0 T 22-04-2016 APT61_RS03105 f04201cd2f11f926ef5b3fa81ea2a454 527 PANTHER PTHR10196:SF70 3 514 0.0 T 22-04-2016 APT61_RS03105 f04201cd2f11f926ef5b3fa81ea2a454 527 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 250 8.9E-50 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APT61_RS03105 f04201cd2f11f926ef5b3fa81ea2a454 527 Gene3D G3DSA:3.30.420.40 1 250 2.3E-58 T 22-04-2016 APT61_RS03105 f04201cd2f11f926ef5b3fa81ea2a454 527 PIRSF PIRSF000538 1 509 9.7E-118 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APT61_RS03105 f04201cd2f11f926ef5b3fa81ea2a454 527 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 292 456 2.1E-18 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APT61_RS03105 f04201cd2f11f926ef5b3fa81ea2a454 527 SUPERFAMILY SSF53067 3 253 9.44E-59 T 22-04-2016 APT61_RS03105 f04201cd2f11f926ef5b3fa81ea2a454 527 Gene3D G3DSA:3.30.420.40 253 506 3.5E-40 T 22-04-2016 APT61_RS21765 c755c43154e3b927fa7739a38dea6c5c 463 Pfam PF00860 Permease family 34 426 2.9E-110 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS21765 c755c43154e3b927fa7739a38dea6c5c 463 PANTHER PTHR11119:SF44 1 463 1.7E-279 T 22-04-2016 APT61_RS21765 c755c43154e3b927fa7739a38dea6c5c 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 457 1.4E-140 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APT61_RS21765 c755c43154e3b927fa7739a38dea6c5c 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 375 395 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APT61_RS21765 c755c43154e3b927fa7739a38dea6c5c 463 PANTHER PTHR11119 1 463 1.7E-279 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS02630 f4f45594826eab757e066aa525db1c2f 163 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 9 155 5.2E-63 T 22-04-2016 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS02630 f4f45594826eab757e066aa525db1c2f 163 SUPERFAMILY SSF55804 9 155 2.49E-42 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APT61_RS02630 f4f45594826eab757e066aa525db1c2f 163 PANTHER PTHR30505 3 163 2.3E-88 T 22-04-2016 APT61_RS02630 f4f45594826eab757e066aa525db1c2f 163 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 58 74 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS02630 f4f45594826eab757e066aa525db1c2f 163 PANTHER PTHR30505:SF6 3 163 2.3E-88 T 22-04-2016 APT61_RS02630 f4f45594826eab757e066aa525db1c2f 163 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 13 155 8.5E-37 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS02630 f4f45594826eab757e066aa525db1c2f 163 Gene3D G3DSA:3.40.930.10 3 159 2.7E-48 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS02090 015d00c9b7f7f2897a9ebd700c9a9d69 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.8E-41 T 22-04-2016 APT61_RS02090 015d00c9b7f7f2897a9ebd700c9a9d69 233 PANTHER PTHR11760:SF19 2 233 1.3E-149 T 22-04-2016 APT61_RS02090 015d00c9b7f7f2897a9ebd700c9a9d69 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.6E-100 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APT61_RS02090 015d00c9b7f7f2897a9ebd700c9a9d69 233 Gene3D G3DSA:3.30.1140.32 108 207 5.9E-48 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APT61_RS02090 015d00c9b7f7f2897a9ebd700c9a9d69 233 SMART SM00322 60 125 1.6E-6 T 22-04-2016 IPR004087 K Homology domain GO:0003676 APT61_RS02090 015d00c9b7f7f2897a9ebd700c9a9d69 233 Gene3D G3DSA:3.30.300.20 18 107 1.1E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APT61_RS02090 015d00c9b7f7f2897a9ebd700c9a9d69 233 Pfam PF07650 KH domain 38 111 9.5E-19 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 APT61_RS02090 015d00c9b7f7f2897a9ebd700c9a9d69 233 SUPERFAMILY SSF54821 108 206 6.93E-41 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 APT61_RS02090 015d00c9b7f7f2897a9ebd700c9a9d69 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.15 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 APT61_RS02090 015d00c9b7f7f2897a9ebd700c9a9d69 233 PANTHER PTHR11760 2 233 1.3E-149 T 22-04-2016 APT61_RS02090 015d00c9b7f7f2897a9ebd700c9a9d69 233 SUPERFAMILY SSF54814 2 106 1.6E-37 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 APT61_RS02090 015d00c9b7f7f2897a9ebd700c9a9d69 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site APT61_RS11925 efa38c792d8e4e7e15d66eaea7e960a1 185 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 172 2.8E-6 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 APT61_RS11925 efa38c792d8e4e7e15d66eaea7e960a1 185 SUPERFAMILY SSF53254 2 176 3.0E-13 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APT61_RS11925 efa38c792d8e4e7e15d66eaea7e960a1 185 Gene3D G3DSA:3.40.50.1240 1 178 7.7E-12 T 22-04-2016 IPR029033 Histidine phosphatase superfamily APT61_RS11615 7af483bc53aa91acfcc758f71e6a30bf 232 PANTHER PTHR24220:SF404 3 232 9.9E-133 T 22-04-2016 APT61_RS11615 7af483bc53aa91acfcc758f71e6a30bf 232 PANTHER PTHR24220 3 232 9.9E-133 T 22-04-2016 APT61_RS11615 7af483bc53aa91acfcc758f71e6a30bf 232 Pfam PF00005 ABC transporter 17 161 4.8E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS11615 7af483bc53aa91acfcc758f71e6a30bf 232 SMART SM00382 26 219 1.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS11615 7af483bc53aa91acfcc758f71e6a30bf 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 1.1E-105 T 22-04-2016 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE APT61_RS11615 7af483bc53aa91acfcc758f71e6a30bf 232 Gene3D G3DSA:3.40.50.300 1 223 3.4E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11615 7af483bc53aa91acfcc758f71e6a30bf 232 SUPERFAMILY SSF52540 2 222 2.89E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14665 c084d526325b7c7d2f7ec1cdc63872fc 484 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 21 480 5.1E-87 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 APT61_RS14665 c084d526325b7c7d2f7ec1cdc63872fc 484 SUPERFAMILY SSF103473 213 473 3.23E-29 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS14665 c084d526325b7c7d2f7ec1cdc63872fc 484 SUPERFAMILY SSF103473 22 179 3.23E-29 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS14665 c084d526325b7c7d2f7ec1cdc63872fc 484 Pfam PF13347 MFS/sugar transport protein 23 469 6.7E-82 T 22-04-2016 APT61_RS14665 c084d526325b7c7d2f7ec1cdc63872fc 484 PANTHER PTHR11328 5 484 1.3E-67 T 22-04-2016 APT61_RS14665 c084d526325b7c7d2f7ec1cdc63872fc 484 Gene3D G3DSA:1.20.1250.20 26 239 8.8E-8 T 22-04-2016 APT61_RS14665 c084d526325b7c7d2f7ec1cdc63872fc 484 Gene3D G3DSA:1.20.1250.20 259 472 1.3E-11 T 22-04-2016 APT61_RS19385 09367973c5005cea8cdec46c8c979b52 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 185 204 8.5E-20 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APT61_RS19385 09367973c5005cea8cdec46c8c979b52 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 205 224 8.5E-20 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APT61_RS19385 09367973c5005cea8cdec46c8c979b52 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 40 61 8.5E-20 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APT61_RS19385 09367973c5005cea8cdec46c8c979b52 266 PRINTS PR00164 ABC-2 type transport system membrane protein signature 148 172 8.5E-20 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APT61_RS19385 09367973c5005cea8cdec46c8c979b52 266 Pfam PF01061 ABC-2 type transporter 23 226 1.2E-21 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 APT61_RS19385 09367973c5005cea8cdec46c8c979b52 266 PIRSF PIRSF006648 2 262 5.2E-20 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APT61_RS19385 09367973c5005cea8cdec46c8c979b52 266 PANTHER PTHR30413 18 264 8.1E-20 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APT61_RS17535 148ba4863ee9e4a9b7db11a1d0077135 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 42.5 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 APT61_RS17535 148ba4863ee9e4a9b7db11a1d0077135 303 PANTHER PTHR38103 3 303 7.1E-160 T 22-04-2016 APT61_RS17535 148ba4863ee9e4a9b7db11a1d0077135 303 PANTHER PTHR38103:SF1 3 303 7.1E-160 T 22-04-2016 APT61_RS17535 148ba4863ee9e4a9b7db11a1d0077135 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 3.4E-127 T 22-04-2016 IPR007476 Putative exonuclease, RdgC GO:0006310 APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 PANTHER PTHR30582:SF10 305 424 6.3E-263 T 22-04-2016 APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 PANTHER PTHR30582:SF10 52 258 6.3E-263 T 22-04-2016 APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 PANTHER PTHR30582:SF10 460 607 6.3E-263 T 22-04-2016 APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 Pfam PF01471 Putative peptidoglycan binding domain 307 340 1.4E-5 T 22-04-2016 IPR002477 Peptidoglycan binding-like APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 Pfam PF03734 L,D-transpeptidase catalytic domain 369 535 1.9E-30 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 SUPERFAMILY SSF47090 239 274 2.2E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 SUPERFAMILY SSF47090 306 348 2.2E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 PANTHER PTHR30582 305 424 6.3E-263 T 22-04-2016 APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 PANTHER PTHR30582 52 258 6.3E-263 T 22-04-2016 APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 PANTHER PTHR30582 460 607 6.3E-263 T 22-04-2016 APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 Gene3D G3DSA:1.10.101.10 239 349 3.0E-17 T 22-04-2016 IPR002477 Peptidoglycan binding-like APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 SUPERFAMILY SSF141523 367 420 5.49E-20 T 22-04-2016 APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 SUPERFAMILY SSF141523 476 525 5.49E-20 T 22-04-2016 APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 Gene3D G3DSA:2.40.440.10 366 411 3.2E-13 T 22-04-2016 APT61_RS14890 3a38172c93c3507225b6180046ce4e94 607 Gene3D G3DSA:2.40.440.10 478 526 3.2E-13 T 22-04-2016 APT61_RS20475 1178c8536c50e4d5640406e96242179e 343 PANTHER PTHR30538:SF1 8 337 1.8E-147 T 22-04-2016 APT61_RS20475 1178c8536c50e4d5640406e96242179e 343 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 2.8E-146 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase APT61_RS20475 1178c8536c50e4d5640406e96242179e 343 Pfam PF13394 4Fe-4S single cluster domain 117 191 4.1E-6 T 22-04-2016 APT61_RS20475 1178c8536c50e4d5640406e96242179e 343 Pfam PF04055 Radical SAM superfamily 118 248 1.0E-7 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS20475 1178c8536c50e4d5640406e96242179e 343 SUPERFAMILY SSF102114 102 324 2.49E-28 T 22-04-2016 APT61_RS20475 1178c8536c50e4d5640406e96242179e 343 PIRSF PIRSF004911 1 343 4.3E-123 T 22-04-2016 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase APT61_RS20475 1178c8536c50e4d5640406e96242179e 343 Gene3D G3DSA:3.20.20.70 105 319 2.0E-18 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS20475 1178c8536c50e4d5640406e96242179e 343 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 3.0E-159 T 22-04-2016 IPR022462 Lysine-2,3-aminomutase-like APT61_RS20475 1178c8536c50e4d5640406e96242179e 343 PANTHER PTHR30538 8 337 1.8E-147 T 22-04-2016 APT61_RS11630 9ae96cf74674040be8e52fb59b31ae23 524 Pfam PF13646 HEAT repeats 167 229 2.5E-7 T 22-04-2016 APT61_RS11630 9ae96cf74674040be8e52fb59b31ae23 524 SUPERFAMILY SSF48371 113 228 4.2E-8 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 APT61_RS11630 9ae96cf74674040be8e52fb59b31ae23 524 PANTHER PTHR11795:SF349 1 524 7.4E-167 T 22-04-2016 APT61_RS11630 9ae96cf74674040be8e52fb59b31ae23 524 Gene3D G3DSA:1.25.10.10 114 230 2.0E-8 T 22-04-2016 IPR011989 Armadillo-like helical APT61_RS11630 9ae96cf74674040be8e52fb59b31ae23 524 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 230 521 8.7E-128 T 22-04-2016 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type APT61_RS11630 9ae96cf74674040be8e52fb59b31ae23 524 Pfam PF02653 Branched-chain amino acid transport system / permease component 232 507 4.4E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS11630 9ae96cf74674040be8e52fb59b31ae23 524 PANTHER PTHR11795 1 524 7.4E-167 T 22-04-2016 APT61_RS04525 f0c67d59a38fd3b1953e094eb4a0e60d 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.9E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04525 f0c67d59a38fd3b1953e094eb4a0e60d 304 PANTHER PTHR30537 1 304 2.2E-160 T 22-04-2016 APT61_RS04525 f0c67d59a38fd3b1953e094eb4a0e60d 304 Gene3D G3DSA:3.40.190.10 180 258 9.4E-16 T 22-04-2016 APT61_RS04525 f0c67d59a38fd3b1953e094eb4a0e60d 304 Gene3D G3DSA:1.10.10.10 2 88 3.7E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04525 f0c67d59a38fd3b1953e094eb4a0e60d 304 PANTHER PTHR30537:SF26 1 304 2.2E-160 T 22-04-2016 APT61_RS04525 f0c67d59a38fd3b1953e094eb4a0e60d 304 Gene3D G3DSA:3.40.190.10 94 179 1.4E-35 T 22-04-2016 APT61_RS04525 f0c67d59a38fd3b1953e094eb4a0e60d 304 SUPERFAMILY SSF46785 3 87 2.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04525 f0c67d59a38fd3b1953e094eb4a0e60d 304 SUPERFAMILY SSF53850 93 296 4.19E-40 T 22-04-2016 APT61_RS04525 f0c67d59a38fd3b1953e094eb4a0e60d 304 Pfam PF03466 LysR substrate binding domain 91 292 6.7E-40 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS04525 f0c67d59a38fd3b1953e094eb4a0e60d 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 9.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04525 f0c67d59a38fd3b1953e094eb4a0e60d 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 9.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04525 f0c67d59a38fd3b1953e094eb4a0e60d 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 9.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS20175 47a1b093a897297650dc5405dc563f76 282 PANTHER PTHR14194:SF73 2 279 2.9E-116 T 22-04-2016 APT61_RS20175 47a1b093a897297650dc5405dc563f76 282 Pfam PF05368 NmrA-like family 2 220 1.5E-23 T 22-04-2016 IPR008030 NmrA-like domain APT61_RS20175 47a1b093a897297650dc5405dc563f76 282 PANTHER PTHR14194 2 279 2.9E-116 T 22-04-2016 APT61_RS20175 47a1b093a897297650dc5405dc563f76 282 Gene3D G3DSA:3.40.50.720 2 217 7.8E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS20175 47a1b093a897297650dc5405dc563f76 282 SUPERFAMILY SSF51735 2 255 5.76E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS17110 7e3acca390d87e104ed39e18f78357a2 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 2.0E-76 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APT61_RS17110 7e3acca390d87e104ed39e18f78357a2 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 53.524 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APT61_RS17110 7e3acca390d87e104ed39e18f78357a2 214 Pfam PF00406 Adenylate kinase 5 186 1.0E-60 T 22-04-2016 APT61_RS17110 7e3acca390d87e104ed39e18f78357a2 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 3.5E-15 T 22-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APT61_RS17110 7e3acca390d87e104ed39e18f78357a2 214 PANTHER PTHR23359 1 213 2.1E-114 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APT61_RS17110 7e3acca390d87e104ed39e18f78357a2 214 SUPERFAMILY SSF52540 1 213 7.83E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17110 7e3acca390d87e104ed39e18f78357a2 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APT61_RS17110 7e3acca390d87e104ed39e18f78357a2 214 PRINTS PR00094 Adenylate kinase signature 173 187 1.8E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APT61_RS17110 7e3acca390d87e104ed39e18f78357a2 214 PRINTS PR00094 Adenylate kinase signature 32 46 1.8E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APT61_RS17110 7e3acca390d87e104ed39e18f78357a2 214 PRINTS PR00094 Adenylate kinase signature 4 17 1.8E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APT61_RS17110 7e3acca390d87e104ed39e18f78357a2 214 PRINTS PR00094 Adenylate kinase signature 81 97 1.8E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APT61_RS17110 7e3acca390d87e104ed39e18f78357a2 214 PRINTS PR00094 Adenylate kinase signature 156 171 1.8E-35 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 APT61_RS17110 7e3acca390d87e104ed39e18f78357a2 214 Gene3D G3DSA:3.40.50.300 1 212 2.2E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13965 2e6fddc68baf7179e5a8b8711a7f2913 340 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 337 1.7E-147 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like APT61_RS13965 2e6fddc68baf7179e5a8b8711a7f2913 340 PANTHER PTHR30518:SF2 3 340 3.4E-98 T 22-04-2016 APT61_RS13965 2e6fddc68baf7179e5a8b8711a7f2913 340 Gene3D G3DSA:3.30.160.60 303 339 3.4E-18 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 APT61_RS13965 2e6fddc68baf7179e5a8b8711a7f2913 340 Pfam PF02618 YceG-like family 43 328 9.5E-80 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like APT61_RS13965 2e6fddc68baf7179e5a8b8711a7f2913 340 Gene3D G3DSA:3.30.160.60 71 109 2.2E-23 T 22-04-2016 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain GO:0003676 APT61_RS13965 2e6fddc68baf7179e5a8b8711a7f2913 340 PANTHER PTHR30518 3 340 3.4E-98 T 22-04-2016 APT61_RS09915 c0a57cd532d1feb800c50c15c8d79e33 188 Pfam PF01965 DJ-1/PfpI family 3 184 1.2E-49 T 22-04-2016 IPR002818 DJ-1/PfpI APT61_RS09915 c0a57cd532d1feb800c50c15c8d79e33 188 Gene3D G3DSA:3.40.50.880 1 186 2.6E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS09915 c0a57cd532d1feb800c50c15c8d79e33 188 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 187 2.1E-54 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 APT61_RS09915 c0a57cd532d1feb800c50c15c8d79e33 188 SUPERFAMILY SSF52317 1 186 6.59E-49 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS09915 c0a57cd532d1feb800c50c15c8d79e33 188 PANTHER PTHR11019 111 144 8.5E-53 T 22-04-2016 APT61_RS09915 c0a57cd532d1feb800c50c15c8d79e33 188 PANTHER PTHR11019 3 93 8.5E-53 T 22-04-2016 APT61_RS09915 c0a57cd532d1feb800c50c15c8d79e33 188 PANTHER PTHR11019:SF112 111 144 8.5E-53 T 22-04-2016 APT61_RS09915 c0a57cd532d1feb800c50c15c8d79e33 188 PANTHER PTHR11019:SF112 3 93 8.5E-53 T 22-04-2016 APT61_RS14905 5d852dcba2c9229c36aac56fa2e51e86 440 Pfam PF03882 MukF winged-helix domain 3 117 3.0E-58 T 22-04-2016 IPR033439 Chromosome partition protein MukF, winged-helix domain APT61_RS14905 5d852dcba2c9229c36aac56fa2e51e86 440 Gene3D G3DSA:1.10.10.10 24 118 2.6E-49 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14905 5d852dcba2c9229c36aac56fa2e51e86 440 Pfam PF17192 MukF middle domain 121 281 6.2E-84 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain APT61_RS14905 5d852dcba2c9229c36aac56fa2e51e86 440 SUPERFAMILY SSF140570 119 281 8.76E-77 T 22-04-2016 IPR033440 Chromosome partition protein MukF, middle domain APT61_RS14905 5d852dcba2c9229c36aac56fa2e51e86 440 SUPERFAMILY SSF46785 8 118 7.39E-49 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14905 5d852dcba2c9229c36aac56fa2e51e86 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 57.385 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 APT61_RS14905 5d852dcba2c9229c36aac56fa2e51e86 440 PIRSF PIRSF018282 1 440 7.2E-245 T 22-04-2016 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 APT61_RS14905 5d852dcba2c9229c36aac56fa2e51e86 440 Pfam PF17193 MukF C-terminal domain 283 440 2.7E-81 T 22-04-2016 IPR033441 Chromosome partition protein MukF, C-terminal domain APT61_RS02390 059f29d8427fe681e47f80c46652ba46 333 Pfam PF00174 Oxidoreductase molybdopterin binding domain 107 266 2.5E-28 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 APT61_RS02390 059f29d8427fe681e47f80c46652ba46 333 SUPERFAMILY SSF56524 73 329 1.1E-93 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 APT61_RS02390 059f29d8427fe681e47f80c46652ba46 333 Hamap MF_01206 Sulfoxide reductase catalytic subunit YedY [yedY]. 2 333 61.05 T 22-04-2016 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 APT61_RS02390 059f29d8427fe681e47f80c46652ba46 333 Gene3D G3DSA:3.90.420.10 66 329 1.1E-75 T 22-04-2016 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 APT61_RS02390 059f29d8427fe681e47f80c46652ba46 333 PANTHER PTHR19372:SF1 6 328 3.1E-178 T 22-04-2016 APT61_RS02390 059f29d8427fe681e47f80c46652ba46 333 PANTHER PTHR19372 6 328 3.1E-178 T 22-04-2016 APT61_RS13565 81287bae0d04930e2945430aa428da45 1136 SUPERFAMILY SSF49265 637 702 2.92E-7 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 APT61_RS13565 81287bae0d04930e2945430aa428da45 1136 Pfam PF13550 Putative phage tail protein 344 505 1.3E-13 T 22-04-2016 IPR032876 Tip attachment protein J APT61_RS13565 81287bae0d04930e2945430aa428da45 1136 SMART SM00060 628 702 0.43 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 APT61_RS13565 81287bae0d04930e2945430aa428da45 1136 SMART SM00060 720 803 37.0 T 22-04-2016 IPR003961 Fibronectin type III GO:0005515 APT61_RS13565 81287bae0d04930e2945430aa428da45 1136 PANTHER PTHR36251:SF2 1 998 0.0 T 22-04-2016 APT61_RS13565 81287bae0d04930e2945430aa428da45 1136 Gene3D G3DSA:2.60.40.10 636 708 6.1E-5 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS13565 81287bae0d04930e2945430aa428da45 1136 Pfam PF09327 Domain of unknown function (DUF1983) 983 1062 5.7E-20 T 22-04-2016 IPR015406 Domain of unknown function DUF1983 APT61_RS13565 81287bae0d04930e2945430aa428da45 1136 PANTHER PTHR36251 1 998 0.0 T 22-04-2016 APT61_RS10385 54f6c1f449081953f7bdc3309a1c0afe 304 PANTHER PTHR30537 1 304 3.6E-66 T 22-04-2016 APT61_RS10385 54f6c1f449081953f7bdc3309a1c0afe 304 SUPERFAMILY SSF53850 95 300 1.68E-32 T 22-04-2016 APT61_RS10385 54f6c1f449081953f7bdc3309a1c0afe 304 Pfam PF03466 LysR substrate binding domain 94 297 7.3E-30 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS10385 54f6c1f449081953f7bdc3309a1c0afe 304 Gene3D G3DSA:3.40.190.10 98 196 8.1E-25 T 22-04-2016 APT61_RS10385 54f6c1f449081953f7bdc3309a1c0afe 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 63 2.1E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10385 54f6c1f449081953f7bdc3309a1c0afe 304 SUPERFAMILY SSF46785 6 116 1.86E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10385 54f6c1f449081953f7bdc3309a1c0afe 304 PANTHER PTHR30537:SF26 1 304 3.6E-66 T 22-04-2016 APT61_RS10385 54f6c1f449081953f7bdc3309a1c0afe 304 Gene3D G3DSA:1.10.10.10 6 91 2.6E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS09055 2c31ea8d179d2a69da9c118cd017cc47 259 Pfam PF00561 alpha/beta hydrolase fold 14 233 1.0E-14 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS09055 2c31ea8d179d2a69da9c118cd017cc47 259 PANTHER PTHR10992 2 251 4.2E-58 T 22-04-2016 APT61_RS09055 2c31ea8d179d2a69da9c118cd017cc47 259 PANTHER PTHR10992:SF861 2 251 4.2E-58 T 22-04-2016 APT61_RS09055 2c31ea8d179d2a69da9c118cd017cc47 259 SUPERFAMILY SSF53474 3 249 6.01E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS09055 2c31ea8d179d2a69da9c118cd017cc47 259 Gene3D G3DSA:3.40.50.1820 2 250 4.0E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS09055 2c31ea8d179d2a69da9c118cd017cc47 259 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 3 250 2.5E-87 T 22-04-2016 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185|UniPathway: UPA00157 APT61_RS08865 9afbc1dfd3254933803a51d6e43bcb37 384 SMART SM00341 219 298 1.1E-23 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APT61_RS08865 9afbc1dfd3254933803a51d6e43bcb37 384 TIGRFAM TIGR01388 rnd: ribonuclease D 14 380 7.2E-150 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 APT61_RS08865 9afbc1dfd3254933803a51d6e43bcb37 384 PANTHER PTHR12124 5 371 4.8E-95 T 22-04-2016 APT61_RS08865 9afbc1dfd3254933803a51d6e43bcb37 384 SUPERFAMILY SSF47819 304 381 2.28E-23 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APT61_RS08865 9afbc1dfd3254933803a51d6e43bcb37 384 Pfam PF01612 3'-5' exonuclease 12 178 2.7E-40 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APT61_RS08865 9afbc1dfd3254933803a51d6e43bcb37 384 SUPERFAMILY SSF53098 8 219 2.82E-67 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS08865 9afbc1dfd3254933803a51d6e43bcb37 384 SUPERFAMILY SSF47819 202 310 4.11E-30 T 22-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 APT61_RS08865 9afbc1dfd3254933803a51d6e43bcb37 384 Hamap MF_01899 Ribonuclease D [rnd]. 12 380 44.665 T 22-04-2016 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 APT61_RS08865 9afbc1dfd3254933803a51d6e43bcb37 384 Pfam PF00570 HRDC domain 222 288 2.8E-15 T 22-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 APT61_RS08865 9afbc1dfd3254933803a51d6e43bcb37 384 SMART SM00474 12 180 4.6E-46 T 22-04-2016 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 APT61_RS08865 9afbc1dfd3254933803a51d6e43bcb37 384 PANTHER PTHR12124:SF42 5 371 4.8E-95 T 22-04-2016 APT61_RS08865 9afbc1dfd3254933803a51d6e43bcb37 384 Gene3D G3DSA:3.30.420.10 11 182 4.1E-12 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS02385 f3c915b5477849ee3a6027aeae768d53 199 Pfam PF01794 Ferric reductase like transmembrane component 51 161 2.6E-14 T 22-04-2016 IPR013130 Ferric reductase transmembrane component-like domain APT61_RS02385 f3c915b5477849ee3a6027aeae768d53 199 PANTHER PTHR36964 1 199 7.9E-77 T 22-04-2016 APT61_RS02385 f3c915b5477849ee3a6027aeae768d53 199 Hamap MF_01207 Sulfoxide reductase heme-binding subunit YedZ [yedZ]. 1 199 24.989 T 22-04-2016 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 APT61_RS04115 d49fbe9b7a9047c6bd73a9ac99194d4d 437 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 126 8.3E-36 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 APT61_RS04115 d49fbe9b7a9047c6bd73a9ac99194d4d 437 SUPERFAMILY SSF55920 175 433 2.88E-87 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS04115 d49fbe9b7a9047c6bd73a9ac99194d4d 437 PANTHER PTHR10804:SF17 1 433 1.4E-164 T 22-04-2016 APT61_RS04115 d49fbe9b7a9047c6bd73a9ac99194d4d 437 Pfam PF00557 Metallopeptidase family M24 181 411 1.2E-65 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS04115 d49fbe9b7a9047c6bd73a9ac99194d4d 437 SMART SM01011 1 136 5.5E-58 T 22-04-2016 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 APT61_RS04115 d49fbe9b7a9047c6bd73a9ac99194d4d 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 370 382 8.7E-6 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APT61_RS04115 d49fbe9b7a9047c6bd73a9ac99194d4d 437 PRINTS PR00599 Methionine aminopeptidase-1 signature 253 269 8.7E-6 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase APT61_RS04115 d49fbe9b7a9047c6bd73a9ac99194d4d 437 PANTHER PTHR10804 1 433 1.4E-164 T 22-04-2016 APT61_RS04115 d49fbe9b7a9047c6bd73a9ac99194d4d 437 SUPERFAMILY SSF53092 1 174 6.8E-53 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal APT61_RS04115 d49fbe9b7a9047c6bd73a9ac99194d4d 437 Gene3D G3DSA:3.40.350.10 2 178 7.6E-54 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal APT61_RS04115 d49fbe9b7a9047c6bd73a9ac99194d4d 437 Gene3D G3DSA:3.90.230.10 179 433 3.2E-89 T 22-04-2016 IPR000994 Peptidase M24, structural domain APT61_RS04115 d49fbe9b7a9047c6bd73a9ac99194d4d 437 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site APT61_RS06970 85748de4cf7122c60495cc73b0fb893f 450 PIRSF PIRSF002808 5 450 4.1E-175 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APT61_RS06970 85748de4cf7122c60495cc73b0fb893f 450 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 1.3E-264 T 22-04-2016 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 APT61_RS06970 85748de4cf7122c60495cc73b0fb893f 450 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 3.1E-167 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APT61_RS06970 85748de4cf7122c60495cc73b0fb893f 450 Gene3D G3DSA:1.20.1250.20 238 445 2.7E-46 T 22-04-2016 APT61_RS06970 85748de4cf7122c60495cc73b0fb893f 450 Gene3D G3DSA:1.20.1250.20 23 224 1.6E-53 T 22-04-2016 APT61_RS06970 85748de4cf7122c60495cc73b0fb893f 450 SUPERFAMILY SSF103473 10 442 2.09E-84 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS06970 85748de4cf7122c60495cc73b0fb893f 450 PANTHER PTHR11662:SF141 1 450 3.4E-244 T 22-04-2016 APT61_RS06970 85748de4cf7122c60495cc73b0fb893f 450 PANTHER PTHR11662 1 450 3.4E-244 T 22-04-2016 APT61_RS06970 85748de4cf7122c60495cc73b0fb893f 450 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 22-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 APT61_RS06970 85748de4cf7122c60495cc73b0fb893f 450 Pfam PF07690 Major Facilitator Superfamily 34 400 3.2E-45 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS18665 3b58b881ad34da5134f8f17cb55d2052 163 SUPERFAMILY SSF55021 2 74 9.16E-22 T 22-04-2016 APT61_RS18665 3b58b881ad34da5134f8f17cb55d2052 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 8.7E-24 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS18665 3b58b881ad34da5134f8f17cb55d2052 163 SUPERFAMILY SSF55021 79 162 8.33E-26 T 22-04-2016 APT61_RS18665 3b58b881ad34da5134f8f17cb55d2052 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 1.5E-67 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS18665 3b58b881ad34da5134f8f17cb55d2052 163 Pfam PF01842 ACT domain 4 68 7.4E-15 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 APT61_RS18665 3b58b881ad34da5134f8f17cb55d2052 163 Gene3D G3DSA:3.30.70.1150 83 162 2.2E-27 T 22-04-2016 APT61_RS18665 3b58b881ad34da5134f8f17cb55d2052 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 4.0E-36 T 22-04-2016 APT61_RS18665 3b58b881ad34da5134f8f17cb55d2052 163 PANTHER PTHR30239 1 160 3.0E-96 T 22-04-2016 APT61_RS18665 3b58b881ad34da5134f8f17cb55d2052 163 Gene3D G3DSA:3.30.70.260 1 76 2.8E-35 T 22-04-2016 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 3.0E-23 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 3.0E-23 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 3.0E-23 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 3.0E-23 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 3.0E-23 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 82 94 3.0E-23 T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 Pfam PF01266 FAD dependent oxidoreductase 10 359 6.2E-54 T 22-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 Gene3D G3DSA:3.50.50.60 142 215 1.9E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 Gene3D G3DSA:3.50.50.60 4 96 1.9E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 14 31 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 Gene3D G3DSA:3.30.9.10 97 141 7.7E-5 T 22-04-2016 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 PANTHER PTHR11985 10 541 0.0 T 22-04-2016 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 Pfam PF04324 BFD-like [2Fe-2S] binding domain 432 484 7.4E-9 T 22-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain APT61_RS06965 0356376b20f22945825776d6ee08a968 542 PANTHER PTHR11985:SF14 10 541 0.0 T 22-04-2016 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 Gene3D G3DSA:3.30.9.10 216 316 4.4E-9 T 22-04-2016 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 22-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 539 7.1E-262 T 22-04-2016 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|UniPathway: UPA00618 APT61_RS06965 0356376b20f22945825776d6ee08a968 542 SUPERFAMILY SSF51905 10 322 5.18E-47 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS17260 7fa6a7e95b1cd9f411fcb55e04bda55d 590 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS17260 7fa6a7e95b1cd9f411fcb55e04bda55d 590 SUPERFAMILY SSF90123 7 327 1.96E-69 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS17260 7fa6a7e95b1cd9f411fcb55e04bda55d 590 Gene3D G3DSA:1.20.1560.10 7 319 4.4E-70 T 22-04-2016 APT61_RS17260 7fa6a7e95b1cd9f411fcb55e04bda55d 590 SUPERFAMILY SSF52540 327 572 5.12E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17260 7fa6a7e95b1cd9f411fcb55e04bda55d 590 Pfam PF00005 ABC transporter 352 500 3.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS17260 7fa6a7e95b1cd9f411fcb55e04bda55d 590 Gene3D G3DSA:3.40.50.300 342 565 1.2E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17260 7fa6a7e95b1cd9f411fcb55e04bda55d 590 Pfam PF00664 ABC transporter transmembrane region 22 291 4.5E-38 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS17260 7fa6a7e95b1cd9f411fcb55e04bda55d 590 SMART SM00382 361 547 7.8E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS17260 7fa6a7e95b1cd9f411fcb55e04bda55d 590 PANTHER PTHR24221 2 580 2.4E-194 T 22-04-2016 APT61_RS16550 9c16ded9d4c9cea5c309e343967234d7 399 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 32 396 6.4E-183 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 APT61_RS16550 9c16ded9d4c9cea5c309e343967234d7 399 SUPERFAMILY SSF56112 1 397 5.1E-90 T 22-04-2016 IPR011009 Protein kinase-like domain APT61_RS16550 9c16ded9d4c9cea5c309e343967234d7 399 Pfam PF01636 Phosphotransferase enzyme family 32 263 2.4E-8 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase APT61_RS16550 9c16ded9d4c9cea5c309e343967234d7 399 Gene3D G3DSA:3.90.1200.10 98 267 1.9E-9 T 22-04-2016 APT61_RS16550 9c16ded9d4c9cea5c309e343967234d7 399 PANTHER PTHR34273:SF2 1 397 1.0E-120 T 22-04-2016 APT61_RS16550 9c16ded9d4c9cea5c309e343967234d7 399 PANTHER PTHR34273 1 397 1.0E-120 T 22-04-2016 APT61_RS16550 9c16ded9d4c9cea5c309e343967234d7 399 PIRSF PIRSF031134 1 399 2.5E-163 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 APT61_RS16550 9c16ded9d4c9cea5c309e343967234d7 399 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 399 211.637 T 22-04-2016 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754|UniPathway: UPA00904 APT61_RS14780 9ce07a70eb0486fba32f9d69619ecc9d 586 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 435 510 2.6E-8 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 APT61_RS14780 9ce07a70eb0486fba32f9d69619ecc9d 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 462 481 6.2E-9 T 22-04-2016 APT61_RS14780 9ce07a70eb0486fba32f9d69619ecc9d 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 432 451 6.2E-9 T 22-04-2016 APT61_RS14780 9ce07a70eb0486fba32f9d69619ecc9d 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 6.2E-9 T 22-04-2016 APT61_RS14780 9ce07a70eb0486fba32f9d69619ecc9d 586 SUPERFAMILY SSF54211 347 542 1.21E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS14780 9ce07a70eb0486fba32f9d69619ecc9d 586 PANTHER PTHR10046 153 546 1.4E-161 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 APT61_RS14780 9ce07a70eb0486fba32f9d69619ecc9d 586 Pfam PF13654 AAA domain 141 321 8.8E-22 T 22-04-2016 APT61_RS14780 9ce07a70eb0486fba32f9d69619ecc9d 586 Gene3D G3DSA:3.30.230.10 341 541 6.5E-29 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS14780 9ce07a70eb0486fba32f9d69619ecc9d 586 PANTHER PTHR10046:SF49 153 546 1.4E-161 T 22-04-2016 APT61_RS11285 3b561c482af5cfea2032ca5f1e0fe26a 178 SUPERFAMILY SSF53597 5 176 7.59E-34 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain APT61_RS11285 3b561c482af5cfea2032ca5f1e0fe26a 178 Pfam PF01872 RibD C-terminal domain 6 170 1.0E-17 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 APT61_RS11285 3b561c482af5cfea2032ca5f1e0fe26a 178 Gene3D G3DSA:3.40.430.10 6 176 2.2E-33 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain APT61_RS14040 2450981289e051cae9109f6918a7c985 317 PANTHER PTHR30244 1 317 1.1E-87 T 22-04-2016 APT61_RS14040 2450981289e051cae9109f6918a7c985 317 SUPERFAMILY SSF64518 1 315 3.4E-60 T 22-04-2016 APT61_RS14040 2450981289e051cae9109f6918a7c985 317 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 5.6E-31 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APT61_RS14040 2450981289e051cae9109f6918a7c985 317 PANTHER PTHR30244:SF5 1 317 1.1E-87 T 22-04-2016 APT61_RS14040 2450981289e051cae9109f6918a7c985 317 Gene3D G3DSA:1.20.1330.10 217 259 1.9E-13 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APT61_RS14040 2450981289e051cae9109f6918a7c985 317 Gene3D G3DSA:1.20.1330.10 69 184 1.9E-13 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APT61_RS14040 2450981289e051cae9109f6918a7c985 317 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 188 5.9E-66 T 22-04-2016 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 APT61_RS10780 b42605665393022ce61725a8a8b47bd6 133 SUPERFAMILY SSF55298 8 129 3.46E-36 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APT61_RS10780 b42605665393022ce61725a8a8b47bd6 133 PANTHER PTHR11803 1 133 3.0E-68 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APT61_RS10780 b42605665393022ce61725a8a8b47bd6 133 Pfam PF01042 Endoribonuclease L-PSP 13 127 3.1E-29 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APT61_RS10780 b42605665393022ce61725a8a8b47bd6 133 Gene3D G3DSA:3.30.1330.40 11 129 1.2E-41 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APT61_RS10780 b42605665393022ce61725a8a8b47bd6 133 PANTHER PTHR11803:SF6 1 133 3.0E-68 T 22-04-2016 APT61_RS17515 67faebe04fbccc76d3cc59fc426cb760 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 2.6E-115 T 22-04-2016 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 APT61_RS17515 67faebe04fbccc76d3cc59fc426cb760 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 4.5E-28 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS17515 67faebe04fbccc76d3cc59fc426cb760 229 SMART SM00862 150 225 2.1E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS17515 67faebe04fbccc76d3cc59fc426cb760 229 SUPERFAMILY SSF52172 3 183 5.86E-43 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS17515 67faebe04fbccc76d3cc59fc426cb760 229 PANTHER PTHR26402 3 228 2.6E-155 T 22-04-2016 APT61_RS17515 67faebe04fbccc76d3cc59fc426cb760 229 PANTHER PTHR26402:SF576 3 228 2.6E-155 T 22-04-2016 APT61_RS17515 67faebe04fbccc76d3cc59fc426cb760 229 Gene3D G3DSA:3.40.50.2300 3 124 5.1E-41 T 22-04-2016 APT61_RS17515 67faebe04fbccc76d3cc59fc426cb760 229 Pfam PF00072 Response regulator receiver domain 5 117 4.6E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS17515 67faebe04fbccc76d3cc59fc426cb760 229 SMART SM00448 3 116 2.0E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS17515 67faebe04fbccc76d3cc59fc426cb760 229 Gene3D G3DSA:1.10.10.10 129 226 2.8E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01100 7cc1e4a618e5de19ed412fd21aa306ef 260 PANTHER PTHR10060:SF13 1 260 5.1E-157 T 22-04-2016 APT61_RS01100 7cc1e4a618e5de19ed412fd21aa306ef 260 PIRSF PIRSF005902 1 260 1.9E-75 T 22-04-2016 IPR001130 TatD family GO:0016788 APT61_RS01100 7cc1e4a618e5de19ed412fd21aa306ef 260 Gene3D G3DSA:3.20.20.140 1 259 2.9E-87 T 22-04-2016 APT61_RS01100 7cc1e4a618e5de19ed412fd21aa306ef 260 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 123 133 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APT61_RS01100 7cc1e4a618e5de19ed412fd21aa306ef 260 SUPERFAMILY SSF51556 1 259 2.58E-87 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS01100 7cc1e4a618e5de19ed412fd21aa306ef 260 PANTHER PTHR10060 1 260 5.1E-157 T 22-04-2016 IPR001130 TatD family GO:0016788 APT61_RS01100 7cc1e4a618e5de19ed412fd21aa306ef 260 Pfam PF01026 TatD related DNase 2 257 4.5E-67 T 22-04-2016 IPR001130 TatD family GO:0016788 APT61_RS01100 7cc1e4a618e5de19ed412fd21aa306ef 260 Hamap MF_00901 Tat-linked quality control protein TatD [tatD]. 1 259 64.325 T 22-04-2016 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 APT61_RS01100 7cc1e4a618e5de19ed412fd21aa306ef 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APT61_RS08050 f9b79343b404c3e2bd821579e7193997 89 PANTHER PTHR34040:SF2 1 89 1.1E-40 T 22-04-2016 APT61_RS08050 f9b79343b404c3e2bd821579e7193997 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 7.5E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APT61_RS08050 f9b79343b404c3e2bd821579e7193997 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 7.5E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APT61_RS08050 f9b79343b404c3e2bd821579e7193997 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 7.5E-24 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APT61_RS08050 f9b79343b404c3e2bd821579e7193997 89 PIRSF PIRSF004669 1 89 3.9E-34 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APT61_RS08050 f9b79343b404c3e2bd821579e7193997 89 PANTHER PTHR34040 1 89 1.1E-40 T 22-04-2016 APT61_RS08050 f9b79343b404c3e2bd821579e7193997 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.3E-30 T 22-04-2016 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 APT61_RS08050 f9b79343b404c3e2bd821579e7193997 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 7.5E-35 T 22-04-2016 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 APT61_RS09865 68a2237038c03c2840c58907fb71b4e3 322 PANTHER PTHR23150 47 175 5.1E-25 T 22-04-2016 APT61_RS09865 68a2237038c03c2840c58907fb71b4e3 322 PANTHER PTHR23150 192 250 5.1E-25 T 22-04-2016 APT61_RS09865 68a2237038c03c2840c58907fb71b4e3 322 SUPERFAMILY SSF56436 46 271 2.59E-43 T 22-04-2016 IPR016187 C-type lectin fold APT61_RS09865 68a2237038c03c2840c58907fb71b4e3 322 Pfam PF03781 Sulfatase-modifying factor enzyme 1 47 259 2.2E-34 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme APT61_RS09865 68a2237038c03c2840c58907fb71b4e3 322 Gene3D G3DSA:3.90.1580.10 42 307 4.8E-45 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme APT61_RS08065 12acc77c11b7acd6ea352f9069296e21 137 PANTHER PTHR22617 1 135 1.9E-38 T 22-04-2016 APT61_RS08065 12acc77c11b7acd6ea352f9069296e21 137 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 3.3E-26 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) APT61_RS08065 12acc77c11b7acd6ea352f9069296e21 137 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 53 128 8.6E-34 T 22-04-2016 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 APT61_RS08065 12acc77c11b7acd6ea352f9069296e21 137 Gene3D G3DSA:2.30.330.10 52 136 3.8E-39 T 22-04-2016 APT61_RS08065 12acc77c11b7acd6ea352f9069296e21 137 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 49 1.0E-19 T 22-04-2016 IPR031576 Flagellar motor switch protein FliN, N-terminal APT61_RS08065 12acc77c11b7acd6ea352f9069296e21 137 SUPERFAMILY SSF101801 54 135 4.32E-27 T 22-04-2016 IPR001543 Surface presentation of antigen (SpoA) APT61_RS08065 12acc77c11b7acd6ea352f9069296e21 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.8E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 APT61_RS08065 12acc77c11b7acd6ea352f9069296e21 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.8E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 APT61_RS08065 12acc77c11b7acd6ea352f9069296e21 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.8E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 APT61_RS08065 12acc77c11b7acd6ea352f9069296e21 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.8E-30 T 22-04-2016 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 SUPERFAMILY SSF50998 474 697 1.7E-133 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 SUPERFAMILY SSF50998 81 431 1.7E-133 T 22-04-2016 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 Gene3D G3DSA:2.140.10.10 481 697 1.7E-132 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 Gene3D G3DSA:2.140.10.10 81 445 1.7E-132 T 22-04-2016 IPR027295 Quinoprotein alcohol dehydrogenase-like domain APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 SMART SM00564 258 299 0.7 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 SMART SM00564 319 368 140.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 SMART SM00564 202 233 94.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 SMART SM00564 389 422 290.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 SMART SM00564 141 173 0.0037 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 SMART SM00564 620 653 0.019 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 SMART SM00564 563 597 110.0 T 22-04-2016 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 Pfam PF13360 PQQ-like domain 117 367 2.1E-10 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 Pfam PF13360 PQQ-like domain 580 666 5.1E-8 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 PANTHER PTHR32303 491 698 3.2E-87 T 22-04-2016 APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 PANTHER PTHR32303 99 417 3.2E-87 T 22-04-2016 APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 PANTHER PTHR32303:SF4 99 417 3.2E-87 T 22-04-2016 APT61_RS10320 64f89ef20a98cef7ac231f3dc296d0bf 698 PANTHER PTHR32303:SF4 491 698 3.2E-87 T 22-04-2016 APT61_RS07505 a8194cc2fa63ee022b06f089db2d8f29 425 Gene3D G3DSA:1.20.1250.20 15 197 2.1E-17 T 22-04-2016 APT61_RS07505 a8194cc2fa63ee022b06f089db2d8f29 425 Gene3D G3DSA:1.20.1250.20 224 410 1.7E-20 T 22-04-2016 APT61_RS07505 a8194cc2fa63ee022b06f089db2d8f29 425 SUPERFAMILY SSF103473 13 410 1.31E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS07505 a8194cc2fa63ee022b06f089db2d8f29 425 Pfam PF07690 Major Facilitator Superfamily 25 313 4.7E-20 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS07505 a8194cc2fa63ee022b06f089db2d8f29 425 TIGRFAM TIGR00897 2A0118: polyol permease 1 406 3.7E-190 T 22-04-2016 IPR004748 Polyol permease GO:0005215|GO:0006810|GO:0016021 APT61_RS17570 02143b916acd8499f205e254664a5bab 366 Pfam PF05230 MASE2 domain 35 123 3.3E-27 T 22-04-2016 IPR007894 MASE2 APT61_RS17570 02143b916acd8499f205e254664a5bab 366 SMART SM00267 194 365 8.1E-65 T 22-04-2016 IPR000160 GGDEF domain APT61_RS17570 02143b916acd8499f205e254664a5bab 366 PANTHER PTHR10799 92 361 2.0E-28 T 22-04-2016 APT61_RS17570 02143b916acd8499f205e254664a5bab 366 Gene3D G3DSA:3.30.70.270 207 364 1.5E-46 T 22-04-2016 APT61_RS17570 02143b916acd8499f205e254664a5bab 366 SUPERFAMILY SSF55073 210 363 5.49E-45 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS17570 02143b916acd8499f205e254664a5bab 366 Pfam PF00990 Diguanylate cyclase, GGDEF domain 206 361 1.6E-45 T 22-04-2016 IPR000160 GGDEF domain APT61_RS17570 02143b916acd8499f205e254664a5bab 366 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 201 365 3.2E-58 T 22-04-2016 IPR000160 GGDEF domain APT61_RS17570 02143b916acd8499f205e254664a5bab 366 PANTHER PTHR10799:SF750 92 361 2.0E-28 T 22-04-2016 APT61_RS08400 107e95b3bbd6047007ea634fbf2b2c79 192 PIRSF PIRSF003159 1 181 1.5E-90 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 APT61_RS08400 107e95b3bbd6047007ea634fbf2b2c79 192 SUPERFAMILY SSF160930 5 160 2.48E-63 T 22-04-2016 APT61_RS08400 107e95b3bbd6047007ea634fbf2b2c79 192 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 172 3.3E-81 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 APT61_RS08400 107e95b3bbd6047007ea634fbf2b2c79 192 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 186 45.005 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 APT61_RS08400 107e95b3bbd6047007ea634fbf2b2c79 192 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 192 9.0E-106 T 22-04-2016 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 APT61_RS04350 9dcf7993462053c390f255f49f2ad6a3 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 1.2E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04350 9dcf7993462053c390f255f49f2ad6a3 312 Gene3D G3DSA:3.40.190.10 93 179 2.0E-16 T 22-04-2016 APT61_RS04350 9dcf7993462053c390f255f49f2ad6a3 312 Pfam PF03466 LysR substrate binding domain 94 293 1.1E-39 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS04350 9dcf7993462053c390f255f49f2ad6a3 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04350 9dcf7993462053c390f255f49f2ad6a3 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04350 9dcf7993462053c390f255f49f2ad6a3 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS04350 9dcf7993462053c390f255f49f2ad6a3 312 SUPERFAMILY SSF46785 3 84 9.07E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04350 9dcf7993462053c390f255f49f2ad6a3 312 Gene3D G3DSA:3.40.190.10 180 262 1.6E-23 T 22-04-2016 APT61_RS04350 9dcf7993462053c390f255f49f2ad6a3 312 PANTHER PTHR30427 2 300 1.1E-145 T 22-04-2016 APT61_RS04350 9dcf7993462053c390f255f49f2ad6a3 312 Gene3D G3DSA:1.10.10.10 5 89 2.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS04350 9dcf7993462053c390f255f49f2ad6a3 312 PANTHER PTHR30427:SF1 2 300 1.1E-145 T 22-04-2016 APT61_RS04350 9dcf7993462053c390f255f49f2ad6a3 312 SUPERFAMILY SSF53850 94 297 3.67E-39 T 22-04-2016 APT61_RS10980 1321db7142472e86c9c1dcb579752bb7 108 PANTHER PTHR33988:SF3 1 108 9.2E-46 T 22-04-2016 APT61_RS10980 1321db7142472e86c9c1dcb579752bb7 108 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 7 104 1.2E-23 T 22-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 APT61_RS10980 1321db7142472e86c9c1dcb579752bb7 108 Gene3D G3DSA:2.30.30.110 2 107 1.0E-34 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor APT61_RS10980 1321db7142472e86c9c1dcb579752bb7 108 PANTHER PTHR33988 1 108 9.2E-46 T 22-04-2016 APT61_RS10980 1321db7142472e86c9c1dcb579752bb7 108 SUPERFAMILY SSF50118 1 107 3.92E-32 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor APT61_RS19020 4089c717d42b16dff04578138e96dcd7 378 PANTHER PTHR30535 28 377 1.0E-49 T 22-04-2016 APT61_RS19020 4089c717d42b16dff04578138e96dcd7 378 Pfam PF01497 Periplasmic binding protein 91 316 9.4E-24 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APT61_RS19020 4089c717d42b16dff04578138e96dcd7 378 PANTHER PTHR30535:SF5 28 377 1.0E-49 T 22-04-2016 APT61_RS19020 4089c717d42b16dff04578138e96dcd7 378 SUPERFAMILY SSF53807 32 366 7.85E-45 T 22-04-2016 APT61_RS19020 4089c717d42b16dff04578138e96dcd7 378 Gene3D G3DSA:3.40.50.1980 182 354 1.8E-19 T 22-04-2016 APT61_RS19020 4089c717d42b16dff04578138e96dcd7 378 Gene3D G3DSA:3.40.50.1980 45 181 6.1E-14 T 22-04-2016 APT61_RS07580 20595515c2bf5441930f9965fb248ac1 406 SMART SM00052 152 394 3.3E-27 T 22-04-2016 IPR001633 EAL domain APT61_RS07580 20595515c2bf5441930f9965fb248ac1 406 Pfam PF04940 Sensors of blue-light using FAD 2 92 2.3E-24 T 22-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 APT61_RS07580 20595515c2bf5441930f9965fb248ac1 406 PANTHER PTHR33121:SF15 1 397 4.8E-161 T 22-04-2016 APT61_RS07580 20595515c2bf5441930f9965fb248ac1 406 PANTHER PTHR33121 1 397 4.8E-161 T 22-04-2016 APT61_RS07580 20595515c2bf5441930f9965fb248ac1 406 Gene3D G3DSA:3.20.20.450 174 389 2.9E-39 T 22-04-2016 IPR001633 EAL domain APT61_RS07580 20595515c2bf5441930f9965fb248ac1 406 SUPERFAMILY SSF141868 174 390 5.89E-44 T 22-04-2016 IPR001633 EAL domain APT61_RS07580 20595515c2bf5441930f9965fb248ac1 406 Pfam PF00563 EAL domain 174 389 4.9E-43 T 22-04-2016 IPR001633 EAL domain APT61_RS07580 20595515c2bf5441930f9965fb248ac1 406 SMART SM01034 2 94 1.4E-35 T 22-04-2016 IPR007024 BLUF domain GO:0009882|GO:0071949 APT61_RS07580 20595515c2bf5441930f9965fb248ac1 406 SUPERFAMILY SSF54975 1 133 3.27E-36 T 22-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 APT61_RS05935 6f0a86f3b90fbc85d6527431f15ad981 107 PANTHER PTHR10072:SF48 1 107 6.9E-49 T 22-04-2016 IPR031108 FeS assembly protein IscA-like GO:0005198|GO:0016226|GO:0051536 APT61_RS05935 6f0a86f3b90fbc85d6527431f15ad981 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 22-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site APT61_RS05935 6f0a86f3b90fbc85d6527431f15ad981 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 2.1E-60 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 APT61_RS05935 6f0a86f3b90fbc85d6527431f15ad981 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 8.5E-26 T 22-04-2016 IPR000361 FeS cluster biogenesis APT61_RS05935 6f0a86f3b90fbc85d6527431f15ad981 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 44.02 T 22-04-2016 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0016226|GO:0051536 APT61_RS05935 6f0a86f3b90fbc85d6527431f15ad981 107 SUPERFAMILY SSF89360 1 96 5.23E-32 T 22-04-2016 IPR000361 FeS cluster biogenesis APT61_RS05935 6f0a86f3b90fbc85d6527431f15ad981 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.2E-37 T 22-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 APT61_RS05935 6f0a86f3b90fbc85d6527431f15ad981 107 PANTHER PTHR10072 1 107 6.9E-49 T 22-04-2016 APT61_RS05935 6f0a86f3b90fbc85d6527431f15ad981 107 Gene3D G3DSA:2.60.300.12 2 96 8.4E-35 T 22-04-2016 IPR000361 FeS cluster biogenesis APT61_RS12750 6e743629a9df434f6ff9590dbef5159e 277 PANTHER PTHR38095 1 276 4.9E-59 T 22-04-2016 APT61_RS12750 6e743629a9df434f6ff9590dbef5159e 277 PANTHER PTHR38095:SF2 1 276 4.9E-59 T 22-04-2016 APT61_RS12750 6e743629a9df434f6ff9590dbef5159e 277 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 274 6.2E-28 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 APT61_RS17700 94af7d5652ed1986b53926aa1ac834a8 171 PANTHER PTHR13256 1 149 3.3E-39 T 22-04-2016 APT61_RS17700 94af7d5652ed1986b53926aa1ac834a8 171 PANTHER PTHR13256:SF10 1 149 3.3E-39 T 22-04-2016 APT61_RS17700 94af7d5652ed1986b53926aa1ac834a8 171 Gene3D G3DSA:3.40.630.30 3 165 4.9E-45 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS17700 94af7d5652ed1986b53926aa1ac834a8 171 SUPERFAMILY SSF55729 3 156 9.9E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS17700 94af7d5652ed1986b53926aa1ac834a8 171 Pfam PF13302 Acetyltransferase (GNAT) domain 7 148 3.1E-31 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 SUPERFAMILY SSF54862 26 251 1.88E-71 T 22-04-2016 APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 Gene3D G3DSA:3.30.70.20 173 227 3.0E-35 T 22-04-2016 APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 Gene3D G3DSA:3.30.70.20 30 103 3.0E-35 T 22-04-2016 APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 3.5E-18 T 22-04-2016 IPR015246 Formate dehydrogenase, transmembrane APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 PANTHER PTHR11938 1 205 2.7E-137 T 22-04-2016 APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 Gene3D G3DSA:3.30.70.20 138 172 1.2E-16 T 22-04-2016 APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 SUPERFAMILY SSF81597 246 290 6.67E-13 T 22-04-2016 APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 PANTHER PTHR11938:SF84 1 205 2.7E-137 T 22-04-2016 APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 Gene3D G3DSA:3.30.70.20 104 137 6.2E-12 T 22-04-2016 APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 Gene3D G3DSA:1.20.5.480 247 294 1.4E-24 T 22-04-2016 APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 PIRSF PIRSF036298 1 294 1.1E-158 T 22-04-2016 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 Pfam PF12800 4Fe-4S binding domain 38 50 0.15 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 Pfam PF13247 4Fe-4S dicluster domain 92 188 1.6E-25 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS11100 7b8e1ddbaa39d672359dc98f4eb86e05 294 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 2.8E-143 T 22-04-2016 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 APT61_RS15810 3770ba20514465f7ed329104e8bc875c 161 Pfam PF01967 MoaC family 15 150 9.2E-55 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APT61_RS15810 3770ba20514465f7ed329104e8bc875c 161 Gene3D G3DSA:3.30.70.640 3 158 2.1E-70 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APT61_RS15810 3770ba20514465f7ed329104e8bc875c 161 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 37.126 T 22-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 APT61_RS15810 3770ba20514465f7ed329104e8bc875c 161 PANTHER PTHR22960 1 158 1.3E-113 T 22-04-2016 APT61_RS15810 3770ba20514465f7ed329104e8bc875c 161 SUPERFAMILY SSF55040 11 155 6.15E-62 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 APT61_RS15810 3770ba20514465f7ed329104e8bc875c 161 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.0E-73 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 APT61_RS01935 a880e1bc6637f0f9c4ac772392d84713 277 PANTHER PTHR22855:SF21 1 234 3.5E-74 T 22-04-2016 APT61_RS01935 a880e1bc6637f0f9c4ac772392d84713 277 Gene3D G3DSA:3.90.226.10 10 220 1.1E-32 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS01935 a880e1bc6637f0f9c4ac772392d84713 277 TIGRFAM TIGR03133 malonate_beta: biotin-independent malonate decarboxylase, beta subunit 5 274 1.6E-115 T 22-04-2016 IPR017556 Biotin-independent malonate decarboxylase, beta subunit GO:0016831|GO:0044262 MetaCyc: PWY-6060 APT61_RS01935 a880e1bc6637f0f9c4ac772392d84713 277 Pfam PF01039 Carboxyl transferase domain 12 230 1.5E-16 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 APT61_RS01935 a880e1bc6637f0f9c4ac772392d84713 277 SUPERFAMILY SSF52096 8 222 1.84E-36 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS01935 a880e1bc6637f0f9c4ac772392d84713 277 PANTHER PTHR22855 1 234 3.5E-74 T 22-04-2016 APT61_RS20225 00fd167434e671b779e9c36593e11f46 131 SUPERFAMILY SSF54995 1 103 1.31E-37 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS20225 00fd167434e671b779e9c36593e11f46 131 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 1.5E-37 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS20225 00fd167434e671b779e9c36593e11f46 131 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 22-04-2016 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS20225 00fd167434e671b779e9c36593e11f46 131 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.693 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS20225 00fd167434e671b779e9c36593e11f46 131 Pfam PF01250 Ribosomal protein S6 3 91 1.6E-27 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 APT61_RS20225 00fd167434e671b779e9c36593e11f46 131 PANTHER PTHR21011:SF1 1 131 1.5E-50 T 22-04-2016 APT61_RS20225 00fd167434e671b779e9c36593e11f46 131 PANTHER PTHR21011 1 131 1.5E-50 T 22-04-2016 APT61_RS20225 00fd167434e671b779e9c36593e11f46 131 Gene3D G3DSA:3.30.70.60 1 103 4.8E-42 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 APT61_RS04315 e5485ae79ef0a899230d6b227f7ddded 375 Gene3D G3DSA:2.130.10.10 5 374 1.9E-69 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APT61_RS04315 e5485ae79ef0a899230d6b227f7ddded 375 SUPERFAMILY SSF82171 164 371 1.77E-31 T 22-04-2016 APT61_RS04315 e5485ae79ef0a899230d6b227f7ddded 375 SUPERFAMILY SSF82171 14 130 1.77E-31 T 22-04-2016 APT61_RS04315 e5485ae79ef0a899230d6b227f7ddded 375 Pfam PF14583 Oligogalacturonate lyase 2 375 1.3E-197 T 22-04-2016 IPR027946 Oligogalacturonate lyase domain GO:0045490|GO:0047487 KEGG: 00040+4.2.2.6|UniPathway: UPA00545 APT61_RS08010 ee2781c101560410d569518da7fbf50f 305 PIRSF PIRSF016660 1 305 6.9E-125 T 22-04-2016 IPR008526 Inner membrane protein YedI APT61_RS08010 ee2781c101560410d569518da7fbf50f 305 Pfam PF05661 Protein of unknown function (DUF808) 4 293 1.4E-113 T 22-04-2016 IPR008526 Inner membrane protein YedI APT61_RS08010 ee2781c101560410d569518da7fbf50f 305 PANTHER PTHR30503 2 303 4.8E-103 T 22-04-2016 APT61_RS11800 bde2558eae510cdd144733dfc793ef59 299 PANTHER PTHR30537 1 299 1.3E-95 T 22-04-2016 APT61_RS11800 bde2558eae510cdd144733dfc793ef59 299 Gene3D G3DSA:1.10.10.10 5 85 8.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11800 bde2558eae510cdd144733dfc793ef59 299 Pfam PF03466 LysR substrate binding domain 89 298 5.4E-37 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS11800 bde2558eae510cdd144733dfc793ef59 299 PANTHER PTHR30537:SF17 1 299 1.3E-95 T 22-04-2016 APT61_RS11800 bde2558eae510cdd144733dfc793ef59 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 2.6E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS11800 bde2558eae510cdd144733dfc793ef59 299 SUPERFAMILY SSF53850 89 299 4.65E-40 T 22-04-2016 APT61_RS11800 bde2558eae510cdd144733dfc793ef59 299 Gene3D G3DSA:3.40.190.10 92 190 7.5E-23 T 22-04-2016 APT61_RS11800 bde2558eae510cdd144733dfc793ef59 299 SUPERFAMILY SSF46785 5 110 6.51E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01545 b428a1981f3619146d52719029825694 233 Pfam PF00005 ABC transporter 17 161 3.5E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS01545 b428a1981f3619146d52719029825694 233 PANTHER PTHR24220:SF568 3 232 5.4E-140 T 22-04-2016 APT61_RS01545 b428a1981f3619146d52719029825694 233 Gene3D G3DSA:3.40.50.300 1 228 2.1E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01545 b428a1981f3619146d52719029825694 233 PIRSF PIRSF039137 1 233 7.2E-103 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 APT61_RS01545 b428a1981f3619146d52719029825694 233 SUPERFAMILY SSF52540 2 230 1.96E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01545 b428a1981f3619146d52719029825694 233 SMART SM00382 26 212 9.8E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS01545 b428a1981f3619146d52719029825694 233 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS01545 b428a1981f3619146d52719029825694 233 PANTHER PTHR24220 3 232 5.4E-140 T 22-04-2016 APT61_RS14030 33252e79116b93521c96827bd081ccff 312 Gene3D G3DSA:1.10.10.10 11 92 6.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14030 33252e79116b93521c96827bd081ccff 312 PANTHER PTHR30537 2 307 1.2E-82 T 22-04-2016 APT61_RS14030 33252e79116b93521c96827bd081ccff 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 6.2E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS14030 33252e79116b93521c96827bd081ccff 312 Gene3D G3DSA:3.40.190.10 98 181 2.3E-20 T 22-04-2016 APT61_RS14030 33252e79116b93521c96827bd081ccff 312 SUPERFAMILY SSF46785 9 117 6.16E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14030 33252e79116b93521c96827bd081ccff 312 Pfam PF03466 LysR substrate binding domain 94 299 2.2E-38 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS14030 33252e79116b93521c96827bd081ccff 312 SUPERFAMILY SSF53850 94 302 2.9E-40 T 22-04-2016 APT61_RS14030 33252e79116b93521c96827bd081ccff 312 Gene3D G3DSA:3.40.190.10 182 267 3.1E-20 T 22-04-2016 APT61_RS10785 769f66a3d361de667efbfbc6b67daa67 498 PANTHER PTHR11785 1 498 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS10785 769f66a3d361de667efbfbc6b67daa67 498 PIRSF PIRSF006060 23 494 1.3E-65 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS10785 769f66a3d361de667efbfbc6b67daa67 498 ProSitePatterns PS00218 Amino acid permeases signature. 59 89 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APT61_RS10785 769f66a3d361de667efbfbc6b67daa67 498 Pfam PF00324 Amino acid permease 35 476 2.3E-126 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APT61_RS10785 769f66a3d361de667efbfbc6b67daa67 498 PANTHER PTHR11785:SF25 1 498 0.0 T 22-04-2016 APT61_RS11540 5938ed6fa64ef0efb2967e508fd415dc 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 109 125 1.6E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11540 5938ed6fa64ef0efb2967e508fd415dc 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.6E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11540 5938ed6fa64ef0efb2967e508fd415dc 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 206 1.6E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11540 5938ed6fa64ef0efb2967e508fd415dc 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 172 1.6E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11540 5938ed6fa64ef0efb2967e508fd415dc 225 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 153 1.6E-29 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11540 5938ed6fa64ef0efb2967e508fd415dc 225 PANTHER PTHR24322 6 170 4.4E-25 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11540 5938ed6fa64ef0efb2967e508fd415dc 225 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 222 1.1E-32 T 22-04-2016 APT61_RS11540 5938ed6fa64ef0efb2967e508fd415dc 225 SUPERFAMILY SSF51735 2 224 6.18E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11540 5938ed6fa64ef0efb2967e508fd415dc 225 PANTHER PTHR24322:SF513 6 170 4.4E-25 T 22-04-2016 APT61_RS11540 5938ed6fa64ef0efb2967e508fd415dc 225 Gene3D G3DSA:3.40.50.720 2 224 2.9E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS19875 4e294505fb3e8c0dc3beac6a97f7cf22 539 SUPERFAMILY SSF75005 4 320 2.28E-99 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APT61_RS19875 4e294505fb3e8c0dc3beac6a97f7cf22 539 Gene3D G3DSA:2.115.10.20 3 320 7.1E-99 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain APT61_RS19875 4e294505fb3e8c0dc3beac6a97f7cf22 539 PANTHER PTHR22925 1 537 0.0 T 22-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APT61_RS19875 4e294505fb3e8c0dc3beac6a97f7cf22 539 Pfam PF07081 Protein of unknown function (DUF1349) 391 536 6.4E-9 T 22-04-2016 IPR009784 Protein of unknown function DUF1349 APT61_RS19875 4e294505fb3e8c0dc3beac6a97f7cf22 539 Pfam PF04616 Glycosyl hydrolases family 43 4 304 1.4E-108 T 22-04-2016 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 APT61_RS19875 4e294505fb3e8c0dc3beac6a97f7cf22 539 SUPERFAMILY SSF49899 329 535 1.98E-70 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APT61_RS19875 4e294505fb3e8c0dc3beac6a97f7cf22 539 Gene3D G3DSA:2.60.120.200 331 536 1.4E-73 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APT61_RS19875 4e294505fb3e8c0dc3beac6a97f7cf22 539 PANTHER PTHR22925:SF44 1 537 0.0 T 22-04-2016 APT61_RS19315 e5096e49c4147ebb2091903f62f5e2c8 283 SUPERFAMILY SSF53213 12 279 1.31E-52 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 APT61_RS19315 e5096e49c4147ebb2091903f62f5e2c8 283 Gene3D G3DSA:3.40.830.10 5 270 7.9E-31 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 APT61_RS19315 e5096e49c4147ebb2091903f62f5e2c8 283 TIGRFAM TIGR02298 HpaD_Fe: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 1 281 1.1E-162 T 22-04-2016 IPR011984 3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD-Fe KEGG: 00350+1.13.11.15|UniPathway: UPA00208 APT61_RS19315 e5096e49c4147ebb2091903f62f5e2c8 283 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 7 279 2.4E-87 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 APT61_RS17160 1fbaeba66b9dbe68c847e4723dcb0132 397 PANTHER PTHR30158:SF4 14 375 5.1E-205 T 22-04-2016 APT61_RS17160 1fbaeba66b9dbe68c847e4723dcb0132 397 SUPERFAMILY SSF111369 53 300 3.79E-89 T 22-04-2016 APT61_RS17160 1fbaeba66b9dbe68c847e4723dcb0132 397 Gene3D G3DSA:2.40.50.100 65 98 2.5E-26 T 22-04-2016 APT61_RS17160 1fbaeba66b9dbe68c847e4723dcb0132 397 Gene3D G3DSA:2.40.50.100 173 208 2.5E-26 T 22-04-2016 APT61_RS17160 1fbaeba66b9dbe68c847e4723dcb0132 397 PANTHER PTHR30158 14 375 5.1E-205 T 22-04-2016 APT61_RS17160 1fbaeba66b9dbe68c847e4723dcb0132 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 293 9.2E-14 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT61_RS17160 1fbaeba66b9dbe68c847e4723dcb0132 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 375 2.0E-84 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APT61_RS17160 1fbaeba66b9dbe68c847e4723dcb0132 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 90 360 5.9E-7 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APT61_RS16850 05fe94925f5f1dd81b39ccc4e280e7f4 196 Gene3D G3DSA:1.10.357.10 8 188 4.4E-26 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS16850 05fe94925f5f1dd81b39ccc4e280e7f4 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 2.2E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS16850 05fe94925f5f1dd81b39ccc4e280e7f4 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 6.4E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS16850 05fe94925f5f1dd81b39ccc4e280e7f4 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 6.4E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS16850 05fe94925f5f1dd81b39ccc4e280e7f4 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 55 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT61_RS16850 05fe94925f5f1dd81b39ccc4e280e7f4 196 SUPERFAMILY SSF46689 3 77 1.8E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS16850 05fe94925f5f1dd81b39ccc4e280e7f4 196 PANTHER PTHR30328:SF8 3 140 8.0E-19 T 22-04-2016 APT61_RS16850 05fe94925f5f1dd81b39ccc4e280e7f4 196 PANTHER PTHR30328 3 140 8.0E-19 T 22-04-2016 APT61_RS14990 f3f035573370afff8aa206c372e41e3c 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 6.0E-95 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APT61_RS14990 f3f035573370afff8aa206c372e41e3c 285 PANTHER PTHR30520:SF4 12 228 1.3E-103 T 22-04-2016 APT61_RS14990 f3f035573370afff8aa206c372e41e3c 285 PANTHER PTHR30520:SF4 245 281 1.3E-103 T 22-04-2016 APT61_RS14990 f3f035573370afff8aa206c372e41e3c 285 Gene3D G3DSA:1.20.1080.10 29 280 2.2E-89 T 22-04-2016 IPR023271 Aquaporin-like APT61_RS14990 f3f035573370afff8aa206c372e41e3c 285 Pfam PF01226 Formate/nitrite transporter 15 276 6.7E-76 T 22-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 APT61_RS14990 f3f035573370afff8aa206c372e41e3c 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site APT61_RS14990 f3f035573370afff8aa206c372e41e3c 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 9.3E-126 T 22-04-2016 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 APT61_RS14990 f3f035573370afff8aa206c372e41e3c 285 PANTHER PTHR30520 12 228 1.3E-103 T 22-04-2016 APT61_RS14990 f3f035573370afff8aa206c372e41e3c 285 PANTHER PTHR30520 245 281 1.3E-103 T 22-04-2016 APT61_RS14990 f3f035573370afff8aa206c372e41e3c 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 22-04-2016 IPR024002 Formate/nitrite transporter, conserved site APT61_RS03935 cab8ce03bae0b76fb5d18934252f2b9c 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.888 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APT61_RS03935 cab8ce03bae0b76fb5d18934252f2b9c 239 PANTHER PTHR23417 5 239 2.5E-91 T 22-04-2016 APT61_RS03935 cab8ce03bae0b76fb5d18934252f2b9c 239 Gene3D G3DSA:3.40.50.150 56 193 7.8E-16 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS03935 cab8ce03bae0b76fb5d18934252f2b9c 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 1.5E-74 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APT61_RS03935 cab8ce03bae0b76fb5d18934252f2b9c 239 Pfam PF02390 Putative methyltransferase 64 233 7.4E-62 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 APT61_RS03935 cab8ce03bae0b76fb5d18934252f2b9c 239 SUPERFAMILY SSF53335 18 237 7.05E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS03935 cab8ce03bae0b76fb5d18934252f2b9c 239 PANTHER PTHR23417:SF14 5 239 2.5E-91 T 22-04-2016 APT61_RS04585 797c510f552c7cb7ef0ce010c78f542a 149 SUPERFAMILY SSF52218 4 148 3.79E-37 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS04585 797c510f552c7cb7ef0ce010c78f542a 149 PANTHER PTHR19384 1 144 1.5E-25 T 22-04-2016 APT61_RS04585 797c510f552c7cb7ef0ce010c78f542a 149 Pfam PF00258 Flavodoxin 6 139 4.2E-23 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APT61_RS04585 797c510f552c7cb7ef0ce010c78f542a 149 Gene3D G3DSA:3.40.50.360 2 148 6.6E-33 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS04585 797c510f552c7cb7ef0ce010c78f542a 149 PRINTS PR00369 Flavodoxin signature 84 94 1.4E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APT61_RS04585 797c510f552c7cb7ef0ce010c78f542a 149 PRINTS PR00369 Flavodoxin signature 53 64 1.4E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APT61_RS04585 797c510f552c7cb7ef0ce010c78f542a 149 PRINTS PR00369 Flavodoxin signature 108 127 1.4E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 APT61_RS02560 fb950b368fdf9f8a84e3fb4218fa398d 500 PANTHER PTHR30121:SF3 18 441 2.8E-186 T 22-04-2016 APT61_RS02560 fb950b368fdf9f8a84e3fb4218fa398d 500 SUPERFAMILY SSF52540 19 369 4.68E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02560 fb950b368fdf9f8a84e3fb4218fa398d 500 PANTHER PTHR30121 18 441 2.8E-186 T 22-04-2016 APT61_RS02560 fb950b368fdf9f8a84e3fb4218fa398d 500 Gene3D G3DSA:3.40.50.300 204 380 9.4E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02560 fb950b368fdf9f8a84e3fb4218fa398d 500 Gene3D G3DSA:3.40.50.300 16 108 9.4E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02560 fb950b368fdf9f8a84e3fb4218fa398d 500 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 499 4.2E-246 T 22-04-2016 IPR033186 Helicase HerA-like C-terminal APT61_RS13795 f94f0e3b4d0ee5bb312bcf0ea0492ff0 369 PANTHER PTHR11933:SF10 3 365 2.7E-221 T 22-04-2016 APT61_RS13795 f94f0e3b4d0ee5bb312bcf0ea0492ff0 369 PANTHER PTHR11933 3 365 2.7E-221 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APT61_RS13795 f94f0e3b4d0ee5bb312bcf0ea0492ff0 369 Gene3D G3DSA:2.30.30.280 213 280 1.2E-35 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 APT61_RS13795 f94f0e3b4d0ee5bb312bcf0ea0492ff0 369 SUPERFAMILY SSF52402 4 295 6.62E-58 T 22-04-2016 APT61_RS13795 f94f0e3b4d0ee5bb312bcf0ea0492ff0 369 Pfam PF03054 tRNA methyl transferase 6 360 4.4E-144 T 22-04-2016 APT61_RS13795 f94f0e3b4d0ee5bb312bcf0ea0492ff0 369 Gene3D G3DSA:2.40.30.10 282 363 2.4E-33 T 22-04-2016 APT61_RS13795 f94f0e3b4d0ee5bb312bcf0ea0492ff0 369 Gene3D G3DSA:3.40.50.620 2 211 1.1E-97 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS13795 f94f0e3b4d0ee5bb312bcf0ea0492ff0 369 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 6 361 41.077 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APT61_RS13795 f94f0e3b4d0ee5bb312bcf0ea0492ff0 369 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 6 360 1.2E-158 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 APT61_RS04840 bc81b8bd064fcc14342d8b7f80b4481a 71 Pfam PF00455 DeoR C terminal sensor domain 4 45 6.3E-12 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain APT61_RS04840 bc81b8bd064fcc14342d8b7f80b4481a 71 PANTHER PTHR30363:SF15 4 71 4.4E-31 T 22-04-2016 APT61_RS04840 bc81b8bd064fcc14342d8b7f80b4481a 71 SUPERFAMILY SSF100950 5 49 4.71E-9 T 22-04-2016 APT61_RS04840 bc81b8bd064fcc14342d8b7f80b4481a 71 PANTHER PTHR30363 4 71 4.4E-31 T 22-04-2016 APT61_RS17205 39b5618e8e8157d5528511694c23034a 202 PANTHER PTHR40078:SF1 1 193 6.1E-43 T 22-04-2016 APT61_RS17205 39b5618e8e8157d5528511694c23034a 202 PANTHER PTHR40078 1 193 6.1E-43 T 22-04-2016 APT61_RS14355 ad2279662087e1f84f7b5c274633d627 394 PANTHER PTHR10590 3 394 1.4E-218 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 APT61_RS14355 ad2279662087e1f84f7b5c274633d627 394 PANTHER PTHR10590:SF13 3 394 1.4E-218 T 22-04-2016 APT61_RS14355 ad2279662087e1f84f7b5c274633d627 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 9 82 3.2E-19 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 APT61_RS14355 ad2279662087e1f84f7b5c274633d627 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 392 2.1E-56 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 APT61_RS03790 72029e1b279516b6a337574241833dd3 515 SMART SM00283 265 512 7.2E-89 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS03790 72029e1b279516b6a337574241833dd3 515 SMART SM00304 212 264 5.8E-7 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS03790 72029e1b279516b6a337574241833dd3 515 Pfam PF00672 HAMP domain 193 261 1.1E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS03790 72029e1b279516b6a337574241833dd3 515 PANTHER PTHR32089:SF48 133 515 2.7E-183 T 22-04-2016 APT61_RS03790 72029e1b279516b6a337574241833dd3 515 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 290 312 - T 22-04-2016 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site APT61_RS03790 72029e1b279516b6a337574241833dd3 515 Pfam PF02203 Tar ligand binding domain homologue 4 165 1.7E-17 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS03790 72029e1b279516b6a337574241833dd3 515 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 511 8.4E-60 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS03790 72029e1b279516b6a337574241833dd3 515 Gene3D G3DSA:1.10.287.950 280 484 3.9E-59 T 22-04-2016 APT61_RS03790 72029e1b279516b6a337574241833dd3 515 SUPERFAMILY SSF58104 232 513 1.11E-71 T 22-04-2016 APT61_RS03790 72029e1b279516b6a337574241833dd3 515 PANTHER PTHR32089 133 515 2.7E-183 T 22-04-2016 APT61_RS03790 72029e1b279516b6a337574241833dd3 515 SUPERFAMILY SSF47170 28 175 3.4E-6 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS07090 6a010757b7415426695d5b88d78a2dd4 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 24.52 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 APT61_RS07090 6a010757b7415426695d5b88d78a2dd4 75 PIRSF PIRSF006188 1 72 1.6E-37 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 APT61_RS07090 6a010757b7415426695d5b88d78a2dd4 75 SUPERFAMILY SSF158651 1 74 1.31E-32 T 22-04-2016 APT61_RS07090 6a010757b7415426695d5b88d78a2dd4 75 Gene3D G3DSA:1.10.3390.10 1 75 4.2E-39 T 22-04-2016 IPR023202 YejL-like domain APT61_RS07090 6a010757b7415426695d5b88d78a2dd4 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 3.0E-30 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 APT61_RS07090 6a010757b7415426695d5b88d78a2dd4 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 2.1E-26 T 22-04-2016 IPR009857 Uncharacterised protein family UPF0352 APT61_RS11310 1c24bc461dcc670bd844f65f4cbcefbf 83 SUPERFAMILY SSF47413 8 70 1.92E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS11310 1c24bc461dcc670bd844f65f4cbcefbf 83 Gene3D G3DSA:1.10.260.40 7 66 1.7E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS11310 1c24bc461dcc670bd844f65f4cbcefbf 83 SMART SM00530 12 67 3.0E-6 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS11310 1c24bc461dcc670bd844f65f4cbcefbf 83 Pfam PF01381 Helix-turn-helix 14 64 5.9E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS07530 1b9ec4be958435798e9ef2a41cb0b180 287 SUPERFAMILY SSF52540 13 255 3.31E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07530 1b9ec4be958435798e9ef2a41cb0b180 287 Gene3D G3DSA:3.40.50.300 12 263 2.3E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07530 1b9ec4be958435798e9ef2a41cb0b180 287 SMART SM00382 41 240 4.3E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS07530 1b9ec4be958435798e9ef2a41cb0b180 287 PANTHER PTHR24220:SF574 15 272 4.5E-98 T 22-04-2016 APT61_RS07530 1b9ec4be958435798e9ef2a41cb0b180 287 PANTHER PTHR24220 15 272 4.5E-98 T 22-04-2016 APT61_RS07530 1b9ec4be958435798e9ef2a41cb0b180 287 Pfam PF00005 ABC transporter 36 191 2.1E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15865 d7ba670b293f50b588270734bcd11e85 158 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 18 157 8.5E-56 T 22-04-2016 IPR005247 YbhB/YbcL APT61_RS15865 d7ba670b293f50b588270734bcd11e85 158 Pfam PF01161 Phosphatidylethanolamine-binding protein 20 157 1.7E-38 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APT61_RS15865 d7ba670b293f50b588270734bcd11e85 158 Gene3D G3DSA:3.90.280.10 1 158 3.8E-58 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APT61_RS15865 d7ba670b293f50b588270734bcd11e85 158 PANTHER PTHR30289:SF3 1 157 2.9E-117 T 22-04-2016 APT61_RS15865 d7ba670b293f50b588270734bcd11e85 158 SUPERFAMILY SSF49777 1 157 2.35E-52 T 22-04-2016 IPR008914 Phosphatidylethanolamine-binding protein APT61_RS15865 d7ba670b293f50b588270734bcd11e85 158 PANTHER PTHR30289 1 157 2.9E-117 T 22-04-2016 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 Pfam PF00365 Phosphofructokinase 4 276 6.4E-106 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 PIRSF PIRSF000532 1 320 9.1E-132 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 Gene3D G3DSA:3.40.50.450 2 215 1.2E-75 T 22-04-2016 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 5.9E-125 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 PANTHER PTHR13697 2 314 1.5E-137 T 22-04-2016 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 46.672 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 SUPERFAMILY SSF53784 3 310 5.62E-113 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 1.9E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 1.9E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 1.9E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 1.9E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 1.9E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 1.9E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 1.9E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 1.9E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS00480 2dd2d79deacc47076e8e571ef3d3ed99 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 1.9E-81 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 1.5E-45 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 Gene3D G3DSA:3.40.50.1370 144 319 6.1E-74 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 PANTHER PTHR11405 297 332 1.8E-238 T 22-04-2016 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 PANTHER PTHR11405 1 276 1.8E-238 T 22-04-2016 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 SUPERFAMILY SSF53671 2 332 1.96E-97 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 9.9E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 9.9E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 9.9E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 9.9E-26 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 7.4E-135 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 Gene3D G3DSA:3.40.50.1370 4 143 1.4E-56 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 330 5.1E-55 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 PANTHER PTHR11405:SF42 297 332 1.8E-238 T 22-04-2016 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 PANTHER PTHR11405:SF42 1 276 1.8E-238 T 22-04-2016 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 82.338 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 6.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 6.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 6.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 6.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 6.1E-32 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 APT61_RS19860 21b0137dc7e04b2ee76560146b7b8c22 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 APT61_RS17355 808b11489d62721c04cda2c4a01a2622 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 2.9E-88 T 22-04-2016 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 APT61_RS17355 808b11489d62721c04cda2c4a01a2622 204 PANTHER PTHR11403 8 204 1.4E-120 T 22-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 APT61_RS17355 808b11489d62721c04cda2c4a01a2622 204 SUPERFAMILY SSF81452 10 202 5.23E-60 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 APT61_RS17355 808b11489d62721c04cda2c4a01a2622 204 Gene3D G3DSA:1.20.120.80 26 202 6.5E-52 T 22-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 APT61_RS17355 808b11489d62721c04cda2c4a01a2622 204 PANTHER PTHR11403:SF2 8 204 1.4E-120 T 22-04-2016 APT61_RS17355 808b11489d62721c04cda2c4a01a2622 204 Pfam PF00510 Cytochrome c oxidase subunit III 15 202 1.2E-17 T 22-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 APT61_RS07500 45c96c760ccec905e3acfcd00e1a9f9f 487 SUPERFAMILY SSF53067 2 246 7.41E-77 T 22-04-2016 APT61_RS07500 45c96c760ccec905e3acfcd00e1a9f9f 487 Gene3D G3DSA:3.30.420.40 1 243 1.4E-70 T 22-04-2016 APT61_RS07500 45c96c760ccec905e3acfcd00e1a9f9f 487 PANTHER PTHR10196:SF72 1 479 1.6E-204 T 22-04-2016 APT61_RS07500 45c96c760ccec905e3acfcd00e1a9f9f 487 Gene3D G3DSA:3.30.420.40 245 484 2.5E-54 T 22-04-2016 APT61_RS07500 45c96c760ccec905e3acfcd00e1a9f9f 487 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 243 1.1E-76 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 APT61_RS07500 45c96c760ccec905e3acfcd00e1a9f9f 487 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 252 440 5.8E-36 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 APT61_RS07500 45c96c760ccec905e3acfcd00e1a9f9f 487 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 128 140 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APT61_RS07500 45c96c760ccec905e3acfcd00e1a9f9f 487 PIRSF PIRSF000538 1 486 4.4E-138 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 APT61_RS07500 45c96c760ccec905e3acfcd00e1a9f9f 487 SUPERFAMILY SSF53067 245 479 3.59E-60 T 22-04-2016 APT61_RS07500 45c96c760ccec905e3acfcd00e1a9f9f 487 TIGRFAM TIGR01312 XylB: xylulokinase 3 479 1.7E-192 T 22-04-2016 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 APT61_RS07500 45c96c760ccec905e3acfcd00e1a9f9f 487 PANTHER PTHR10196 1 479 1.6E-204 T 22-04-2016 APT61_RS05590 21771e1f998f0dfca206005053e343d0 177 SUPERFAMILY SSF50346 101 177 4.51E-20 T 22-04-2016 IPR011033 PRC-barrel-like APT61_RS05590 21771e1f998f0dfca206005053e343d0 177 PANTHER PTHR33692 8 175 3.7E-64 T 22-04-2016 APT61_RS05590 21771e1f998f0dfca206005053e343d0 177 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 9 177 24.418 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APT61_RS05590 21771e1f998f0dfca206005053e343d0 177 PANTHER PTHR33692:SF1 8 175 3.7E-64 T 22-04-2016 APT61_RS05590 21771e1f998f0dfca206005053e343d0 177 Pfam PF05239 PRC-barrel domain 99 172 4.1E-10 T 22-04-2016 IPR027275 PRC-barrel domain APT61_RS05590 21771e1f998f0dfca206005053e343d0 177 Gene3D G3DSA:2.30.30.240 101 177 1.1E-29 T 22-04-2016 APT61_RS05590 21771e1f998f0dfca206005053e343d0 177 Pfam PF01782 RimM N-terminal domain 12 93 7.0E-28 T 22-04-2016 IPR002676 RimM protein GO:0006364 APT61_RS05590 21771e1f998f0dfca206005053e343d0 177 SUPERFAMILY SSF50447 9 96 3.53E-26 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APT61_RS05590 21771e1f998f0dfca206005053e343d0 177 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 10 177 9.5E-61 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 APT61_RS05590 21771e1f998f0dfca206005053e343d0 177 Gene3D G3DSA:2.40.30.60 3 96 2.6E-37 T 22-04-2016 IPR002676 RimM protein GO:0006364 APT61_RS18880 1f6b3efa1f4d2b5bb2f612ef29c8d950 328 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 324 36.188 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APT61_RS18880 1f6b3efa1f4d2b5bb2f612ef29c8d950 328 Gene3D G3DSA:3.40.718.10 2 326 6.4E-138 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APT61_RS18880 1f6b3efa1f4d2b5bb2f612ef29c8d950 328 SUPERFAMILY SSF53659 4 326 8.64E-118 T 22-04-2016 APT61_RS18880 1f6b3efa1f4d2b5bb2f612ef29c8d950 328 PANTHER PTHR30004:SF5 1 326 5.6E-218 T 22-04-2016 APT61_RS18880 1f6b3efa1f4d2b5bb2f612ef29c8d950 328 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 323 2.1E-131 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APT61_RS18880 1f6b3efa1f4d2b5bb2f612ef29c8d950 328 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 320 6.4E-110 T 22-04-2016 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA GO:0008615|GO:0050570|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295|UniPathway: UPA00244 APT61_RS18880 1f6b3efa1f4d2b5bb2f612ef29c8d950 328 PANTHER PTHR30004 1 326 5.6E-218 T 22-04-2016 APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 26 156 9.2E-17 T 22-04-2016 IPR015882 Beta-hexosaminidase, bacteial type, N-terminal KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 PANTHER PTHR22600 538 600 8.7E-148 T 22-04-2016 APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 PANTHER PTHR22600 492 512 8.7E-148 T 22-04-2016 APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 PANTHER PTHR22600 1 414 8.7E-148 T 22-04-2016 APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 SUPERFAMILY SSF55545 27 158 5.89E-24 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 Gene3D G3DSA:3.20.20.80 532 605 2.4E-139 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 Gene3D G3DSA:3.20.20.80 157 440 2.4E-139 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 SUPERFAMILY SSF51445 535 600 2.11E-105 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 SUPERFAMILY SSF51445 159 417 2.11E-105 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 Gene3D G3DSA:3.30.379.10 5 156 1.1E-26 T 22-04-2016 IPR029018 Chitobiase/beta-hexosaminidase domain 2-like APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 PRINTS PR00738 Glycosyl hydrolase family 20 signature 234 251 5.0E-47 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 PRINTS PR00738 Glycosyl hydrolase family 20 signature 153 170 5.0E-47 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 PRINTS PR00738 Glycosyl hydrolase family 20 signature 566 583 5.0E-47 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 PRINTS PR00738 Glycosyl hydrolase family 20 signature 549 565 5.0E-47 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 PRINTS PR00738 Glycosyl hydrolase family 20 signature 182 203 5.0E-47 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 PRINTS PR00738 Glycosyl hydrolase family 20 signature 118 138 5.0E-47 T 22-04-2016 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APT61_RS19925 308b6899fe765ab7cc0d8757837eace7 794 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 159 584 3.1E-102 T 22-04-2016 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902 APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 Pfam PF00512 His Kinase A (phospho-acceptor) domain 263 330 9.5E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 SMART SM00387 376 484 5.2E-22 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 SUPERFAMILY SSF55874 320 484 1.11E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 483 9.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 465 9.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 427 9.3E-9 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 381 484 7.5E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 Gene3D G3DSA:1.10.287.130 254 326 7.9E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 Gene3D G3DSA:3.30.565.10 333 484 7.1E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 SUPERFAMILY SSF47384 245 331 1.82E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 SMART SM00388 262 330 2.5E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 PANTHER PTHR24423 61 93 3.8E-60 T 22-04-2016 APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 PANTHER PTHR24423 7 12 3.8E-60 T 22-04-2016 APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 PANTHER PTHR24423 189 484 3.8E-60 T 22-04-2016 APT61_RS15290 250ed47f7b9b8f36879471c25c43372c 484 PANTHER PTHR24423 115 160 3.8E-60 T 22-04-2016 APT61_RS16340 41e0936abbc5f47e3e2076f45b3b4dea 155 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 1.3E-39 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APT61_RS16340 41e0936abbc5f47e3e2076f45b3b4dea 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.811 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APT61_RS16340 41e0936abbc5f47e3e2076f45b3b4dea 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site APT61_RS16340 41e0936abbc5f47e3e2076f45b3b4dea 155 Gene3D G3DSA:3.40.390.30 12 153 4.5E-52 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 APT61_RS16340 41e0936abbc5f47e3e2076f45b3b4dea 155 SUPERFAMILY SSF55486 3 151 4.15E-51 T 22-04-2016 APT61_RS16340 41e0936abbc5f47e3e2076f45b3b4dea 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 2.7E-37 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 APT61_RS16340 41e0936abbc5f47e3e2076f45b3b4dea 155 PANTHER PTHR22881 1 154 1.1E-70 T 22-04-2016 APT61_RS05315 aa17e0c24d3ffdd4f306fc719c749d7e 130 PANTHER PTHR36571 2 130 4.3E-61 T 22-04-2016 APT61_RS05315 aa17e0c24d3ffdd4f306fc719c749d7e 130 SUPERFAMILY SSF101756 30 130 2.35E-25 T 22-04-2016 IPR005220 Bacterial OB-fold APT61_RS05315 aa17e0c24d3ffdd4f306fc719c749d7e 130 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 8 130 4.0E-42 T 22-04-2016 IPR016052 Bacteriophage 933W, L0136 APT61_RS05315 aa17e0c24d3ffdd4f306fc719c749d7e 130 Gene3D G3DSA:2.40.50.200 30 130 6.8E-27 T 22-04-2016 IPR005220 Bacterial OB-fold APT61_RS05315 aa17e0c24d3ffdd4f306fc719c749d7e 130 Pfam PF04076 Bacterial OB fold (BOF) protein 29 130 2.9E-34 T 22-04-2016 IPR005220 Bacterial OB-fold APT61_RS05315 aa17e0c24d3ffdd4f306fc719c749d7e 130 PANTHER PTHR36571:SF2 2 130 4.3E-61 T 22-04-2016 APT61_RS09310 53719ea634016f1a32b388a334bde2a0 225 SUPERFAMILY SSF103501 1 224 5.62E-71 T 22-04-2016 IPR023234 NarG-like domain APT61_RS09310 53719ea634016f1a32b388a334bde2a0 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 1.9E-80 T 22-04-2016 IPR023234 NarG-like domain APT61_RS09310 53719ea634016f1a32b388a334bde2a0 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 2.8E-123 T 22-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 APT61_RS09310 53719ea634016f1a32b388a334bde2a0 225 PANTHER PTHR30598:SF4 1 225 5.9E-138 T 22-04-2016 APT61_RS09310 53719ea634016f1a32b388a334bde2a0 225 Gene3D G3DSA:1.20.950.20 2 216 1.7E-72 T 22-04-2016 APT61_RS09310 53719ea634016f1a32b388a334bde2a0 225 PANTHER PTHR30598 1 225 5.9E-138 T 22-04-2016 APT61_RS05975 b1081f584078f82839b6fbf6cb3a618a 281 PANTHER PTHR11364 1 278 1.3E-113 T 22-04-2016 APT61_RS05975 b1081f584078f82839b6fbf6cb3a618a 281 ProSitePatterns PS00683 Rhodanese C-terminal signature. 259 269 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 APT61_RS05975 b1081f584078f82839b6fbf6cb3a618a 281 ProSitePatterns PS00380 Rhodanese signature 1. 42 53 - T 22-04-2016 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 APT61_RS05975 b1081f584078f82839b6fbf6cb3a618a 281 SUPERFAMILY SSF52821 1 152 1.09E-41 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS05975 b1081f584078f82839b6fbf6cb3a618a 281 Gene3D G3DSA:3.40.250.10 158 278 3.4E-40 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS05975 b1081f584078f82839b6fbf6cb3a618a 281 SMART SM00450 7 132 8.1E-28 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS05975 b1081f584078f82839b6fbf6cb3a618a 281 SMART SM00450 155 275 4.7E-21 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS05975 b1081f584078f82839b6fbf6cb3a618a 281 SUPERFAMILY SSF52821 166 279 1.31E-34 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS05975 b1081f584078f82839b6fbf6cb3a618a 281 Pfam PF00581 Rhodanese-like domain 9 128 2.6E-17 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS05975 b1081f584078f82839b6fbf6cb3a618a 281 Pfam PF00581 Rhodanese-like domain 164 270 9.3E-12 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS05975 b1081f584078f82839b6fbf6cb3a618a 281 Gene3D G3DSA:3.40.250.10 1 150 2.5E-47 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS00120 f592ddc062ff05cccb52a4e8af8f05ae 167 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 4 164 2.0E-50 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 APT61_RS00120 f592ddc062ff05cccb52a4e8af8f05ae 167 SUPERFAMILY SSF52540 2 164 1.65E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00120 f592ddc062ff05cccb52a4e8af8f05ae 167 Gene3D G3DSA:3.40.50.300 1 165 2.8E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00120 f592ddc062ff05cccb52a4e8af8f05ae 167 PANTHER PTHR19136:SF82 3 140 1.1E-35 T 22-04-2016 APT61_RS00120 f592ddc062ff05cccb52a4e8af8f05ae 167 PANTHER PTHR19136 3 140 1.1E-35 T 22-04-2016 APT61_RS00120 f592ddc062ff05cccb52a4e8af8f05ae 167 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 4 139 1.4E-48 T 22-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 APT61_RS17175 c4eb29842f2a97f70461a1547c94444d 72 Gene3D G3DSA:1.20.1280.40 6 72 3.2E-37 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA APT61_RS17175 c4eb29842f2a97f70461a1547c94444d 72 SUPERFAMILY SSF68989 2 72 2.09E-31 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA APT61_RS17175 c4eb29842f2a97f70461a1547c94444d 72 Pfam PF05321 Haemolysin expression modulating protein 13 69 6.1E-33 T 22-04-2016 IPR007985 Haemolysin expression modulating, HHA APT61_RS04360 15db6bb45990e34a4cf4552215954935 345 SUPERFAMILY SSF53822 61 333 4.71E-75 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS04360 15db6bb45990e34a4cf4552215954935 345 Gene3D G3DSA:1.10.260.40 2 57 4.3E-25 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS04360 15db6bb45990e34a4cf4552215954935 345 Gene3D G3DSA:3.40.50.2300 58 167 2.7E-42 T 22-04-2016 APT61_RS04360 15db6bb45990e34a4cf4552215954935 345 PANTHER PTHR30146 1 333 1.2E-141 T 22-04-2016 APT61_RS04360 15db6bb45990e34a4cf4552215954935 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.4E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS04360 15db6bb45990e34a4cf4552215954935 345 Pfam PF13377 Periplasmic binding protein-like domain 169 329 1.1E-32 T 22-04-2016 APT61_RS04360 15db6bb45990e34a4cf4552215954935 345 SUPERFAMILY SSF47413 1 59 3.46E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS04360 15db6bb45990e34a4cf4552215954935 345 Gene3D G3DSA:3.40.50.2300 168 330 9.2E-49 T 22-04-2016 APT61_RS04360 15db6bb45990e34a4cf4552215954935 345 SMART SM00354 1 71 8.8E-32 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS04360 15db6bb45990e34a4cf4552215954935 345 PANTHER PTHR30146:SF48 1 333 1.2E-141 T 22-04-2016 APT61_RS12465 152cc3f3e0f62652916a04e95aac2323 189 Gene3D G3DSA:1.10.3600.10 29 151 2.9E-15 T 22-04-2016 IPR009364 Putative bacterial toxin ydaT APT61_RS12465 152cc3f3e0f62652916a04e95aac2323 189 Pfam PF06254 Putative bacterial toxin ydaT 79 161 1.8E-6 T 22-04-2016 IPR009364 Putative bacterial toxin ydaT APT61_RS02615 b2fd08f1eee9d9e21da8f8b37a6afcb7 239 PANTHER PTHR30400:SF0 8 238 2.2E-120 T 22-04-2016 APT61_RS02615 b2fd08f1eee9d9e21da8f8b37a6afcb7 239 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 8 228 7.5E-87 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 APT61_RS02615 b2fd08f1eee9d9e21da8f8b37a6afcb7 239 Gene3D G3DSA:1.10.3810.10 59 228 1.7E-61 T 22-04-2016 APT61_RS02615 b2fd08f1eee9d9e21da8f8b37a6afcb7 239 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 5 230 43.478 T 22-04-2016 IPR011812 Monofunctional biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 UniPathway: UPA00219 APT61_RS02615 b2fd08f1eee9d9e21da8f8b37a6afcb7 239 Pfam PF00912 Transglycosylase 58 224 1.7E-51 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APT61_RS02615 b2fd08f1eee9d9e21da8f8b37a6afcb7 239 SUPERFAMILY SSF53955 49 228 1.49E-61 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS02615 b2fd08f1eee9d9e21da8f8b37a6afcb7 239 PANTHER PTHR30400 8 238 2.2E-120 T 22-04-2016 APT61_RS08405 b17e00ef17dee76b2dd596b179719172 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 22-04-2016 IPR000540 Flagellar motor protein MotA, conserved site APT61_RS08405 b17e00ef17dee76b2dd596b179719172 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 1.4E-117 T 22-04-2016 IPR022522 Flagellar motor stator, MotA APT61_RS08405 b17e00ef17dee76b2dd596b179719172 295 PANTHER PTHR30433:SF4 1 289 1.1E-194 T 22-04-2016 IPR022522 Flagellar motor stator, MotA APT61_RS08405 b17e00ef17dee76b2dd596b179719172 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 140 239 1.9E-11 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 APT61_RS08405 b17e00ef17dee76b2dd596b179719172 295 PANTHER PTHR30433 1 289 1.1E-194 T 22-04-2016 APT61_RS04775 dd83e824e9bc32520e2fc2fe92bae3d0 410 SUPERFAMILY SSF103473 14 407 1.44E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS04775 dd83e824e9bc32520e2fc2fe92bae3d0 410 Pfam PF07690 Major Facilitator Superfamily 17 358 1.7E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS04775 dd83e824e9bc32520e2fc2fe92bae3d0 410 PANTHER PTHR23517:SF2 15 410 1.3E-55 T 22-04-2016 APT61_RS04775 dd83e824e9bc32520e2fc2fe92bae3d0 410 PANTHER PTHR23517 15 410 1.3E-55 T 22-04-2016 APT61_RS04775 dd83e824e9bc32520e2fc2fe92bae3d0 410 Gene3D G3DSA:1.20.1250.20 211 407 8.3E-11 T 22-04-2016 APT61_RS04775 dd83e824e9bc32520e2fc2fe92bae3d0 410 Gene3D G3DSA:1.20.1250.20 15 196 2.7E-26 T 22-04-2016 APT61_RS08005 d757f01d22916837fae81accc128204d 304 PANTHER PTHR32322:SF8 1 302 1.1E-147 T 22-04-2016 APT61_RS08005 d757f01d22916837fae81accc128204d 304 SUPERFAMILY SSF103481 43 144 5.62E-11 T 22-04-2016 APT61_RS08005 d757f01d22916837fae81accc128204d 304 Pfam PF00892 EamA-like transporter family 150 284 1.7E-18 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS08005 d757f01d22916837fae81accc128204d 304 Pfam PF00892 EamA-like transporter family 14 140 1.7E-22 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS08005 d757f01d22916837fae81accc128204d 304 PANTHER PTHR32322 1 302 1.1E-147 T 22-04-2016 APT61_RS08005 d757f01d22916837fae81accc128204d 304 SUPERFAMILY SSF103481 186 287 5.1E-11 T 22-04-2016 APT61_RS00470 99153889f367fe0d5fd1662bae430c61 166 PANTHER PTHR38102 1 158 1.3E-84 T 22-04-2016 APT61_RS00470 99153889f367fe0d5fd1662bae430c61 166 Pfam PF07813 LTXXQ motif family protein 39 136 7.1E-20 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 APT61_RS00470 99153889f367fe0d5fd1662bae430c61 166 PANTHER PTHR38102:SF2 1 158 1.3E-84 T 22-04-2016 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 PANTHER PTHR11686:SF9 4 580 3.3E-243 T 22-04-2016 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 49 571 5.2E-231 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 391 415 - T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 415 433 9.4E-82 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 456 471 9.4E-82 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 391 409 9.4E-82 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 162 181 9.4E-82 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 71 96 9.4E-82 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 291 310 9.4E-82 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 144 162 9.4E-82 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 261 277 9.4E-82 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 480 497 9.4E-82 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 PANTHER PTHR11686 4 580 3.3E-243 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 Pfam PF01019 Gamma-glutamyltranspeptidase 64 572 2.0E-192 T 22-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 APT61_RS01580 e0eb91ff7b113fcd3a93804581953880 580 SUPERFAMILY SSF56235 41 572 1.0E-196 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS12505 cd287d198e4d0f2247cbb7c37778bffd 79 Pfam PF13269 Protein of unknown function (DUF4060) 3 76 9.5E-31 T 22-04-2016 IPR025135 Protein of unknown function DUF4060 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 1.6E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 1.6E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.6E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 1.6E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 1.6E-33 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 Pfam PF02272 DHHA1 domain 800 868 3.6E-17 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 Gene3D G3DSA:3.30.930.10 4 251 4.3E-127 T 22-04-2016 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 208.296 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 SUPERFAMILY SSF50447 455 552 2.5E-20 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 SUPERFAMILY SSF55681 4 255 6.21E-108 T 22-04-2016 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 Pfam PF01411 tRNA synthetases class II (A) 7 555 5.4E-237 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 SMART SM00863 653 696 7.4E-22 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 PANTHER PTHR11777:SF9 1 875 0.0 T 22-04-2016 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 6.9E-18 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 SUPERFAMILY SSF101353 256 465 1.44E-61 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 SUPERFAMILY SSF55186 552 708 1.31E-51 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APT61_RS04865 1de316506d5ef2112fb9f3da2a663e7d 875 PANTHER PTHR11777 1 875 0.0 T 22-04-2016 APT61_RS08250 971c4987aa61b7a0c6e92af1f7b1ec00 493 SUPERFAMILY SSF52540 256 481 1.51E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08250 971c4987aa61b7a0c6e92af1f7b1ec00 493 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS08250 971c4987aa61b7a0c6e92af1f7b1ec00 493 Gene3D G3DSA:3.40.50.300 2 232 1.1E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08250 971c4987aa61b7a0c6e92af1f7b1ec00 493 Gene3D G3DSA:3.40.50.300 254 484 6.8E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08250 971c4987aa61b7a0c6e92af1f7b1ec00 493 SUPERFAMILY SSF52540 3 230 1.05E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08250 971c4987aa61b7a0c6e92af1f7b1ec00 493 PANTHER PTHR24220:SF538 6 377 1.3E-179 T 22-04-2016 APT61_RS08250 971c4987aa61b7a0c6e92af1f7b1ec00 493 Pfam PF00005 ABC transporter 268 423 2.3E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS08250 971c4987aa61b7a0c6e92af1f7b1ec00 493 Pfam PF00005 ABC transporter 20 169 7.0E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS08250 971c4987aa61b7a0c6e92af1f7b1ec00 493 PANTHER PTHR24220 6 377 1.3E-179 T 22-04-2016 APT61_RS08250 971c4987aa61b7a0c6e92af1f7b1ec00 493 SMART SM00382 29 217 3.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS08250 971c4987aa61b7a0c6e92af1f7b1ec00 493 SMART SM00382 277 472 6.2E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS09815 92cd0772531af6e1f155a537ccb366ce 217 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 9 207 2.5E-44 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU APT61_RS09815 92cd0772531af6e1f155a537ccb366ce 217 PANTHER PTHR38033:SF1 1 213 1.4E-35 T 22-04-2016 APT61_RS09815 92cd0772531af6e1f155a537ccb366ce 217 PANTHER PTHR38033 1 213 1.4E-35 T 22-04-2016 APT61_RS09815 92cd0772531af6e1f155a537ccb366ce 217 Pfam PF09850 Type VI secretion system protein DotU 11 203 7.6E-43 T 22-04-2016 IPR017732 Type IV / VI secretion system, DotU APT61_RS18275 18a1ec60e18a6a17002623f9cefe7da0 274 SUPERFAMILY SSF51161 1 256 6.1E-80 T 22-04-2016 IPR011004 Trimeric LpxA-like APT61_RS18275 18a1ec60e18a6a17002623f9cefe7da0 274 PANTHER PTHR19136:SF52 13 273 8.2E-138 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APT61_RS18275 18a1ec60e18a6a17002623f9cefe7da0 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 6.1E-13 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS18275 18a1ec60e18a6a17002623f9cefe7da0 274 Gene3D G3DSA:2.160.10.10 89 255 3.0E-64 T 22-04-2016 APT61_RS18275 18a1ec60e18a6a17002623f9cefe7da0 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.695 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APT61_RS18275 18a1ec60e18a6a17002623f9cefe7da0 274 Gene3D G3DSA:1.10.166.10 1 70 1.2E-32 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APT61_RS18275 18a1ec60e18a6a17002623f9cefe7da0 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 1.8E-25 T 22-04-2016 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APT61_RS18275 18a1ec60e18a6a17002623f9cefe7da0 274 PANTHER PTHR19136 13 273 8.2E-138 T 22-04-2016 APT61_RS18275 18a1ec60e18a6a17002623f9cefe7da0 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APT61_RS18275 18a1ec60e18a6a17002623f9cefe7da0 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0019 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS18275 18a1ec60e18a6a17002623f9cefe7da0 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 7.0E-164 T 22-04-2016 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117|UniPathway: UPA00034 APT61_RS08970 c30aeef0f1cfb769b61f1cda6d5b279e 249 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 17 95 3.9E-10 T 22-04-2016 IPR014054 Bacteriophage regulatory protein, Rha family APT61_RS08970 c30aeef0f1cfb769b61f1cda6d5b279e 249 Pfam PF03374 Phage antirepressor protein KilAC domain 124 223 5.6E-22 T 22-04-2016 IPR005039 Antirepressor protein, C-terminal GO:0003677 APT61_RS16825 2dc460a039e8b2da928144f177ec2b87 82 Pfam PF06643 Protein of unknown function (DUF1158) 1 79 6.4E-44 T 22-04-2016 IPR010590 Protein of unknown function DUF1158 APT61_RS16825 2dc460a039e8b2da928144f177ec2b87 82 ProDom PD027061 YBDJ MEMBRANE TRANSMEMBRANE INNER RAMA 3'REGION ECS0618 1 82 4.0E-14 T 22-04-2016 IPR010590 Protein of unknown function DUF1158 APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 248 1.9E-50 T 22-04-2016 APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 PANTHER PTHR24322 147 179 9.2E-91 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 PANTHER PTHR24322 13 131 9.2E-91 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 PANTHER PTHR24322:SF336 147 179 9.2E-91 T 22-04-2016 APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 PANTHER PTHR24322:SF336 13 131 9.2E-91 T 22-04-2016 APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 SUPERFAMILY SSF51735 3 249 4.0E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 77 94 3.0E-66 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 162 185 3.0E-66 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 201 220 3.0E-66 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 97 117 3.0E-66 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 3.0E-66 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 227 246 3.0E-66 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 7.5E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 7.5E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 7.5E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 180 0.0021 T 22-04-2016 APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 250 9.8E-105 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APT61_RS16615 2e648ace931ebea124e12c62f322f2ea 251 Gene3D G3DSA:3.40.50.720 3 249 4.2E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS17960 67d37c74ffdb4503d7543d843ebb3108 71 Pfam PF04400 Protein of unknown function (DUF539) 23 64 1.5E-21 T 22-04-2016 IPR007495 (Na+)-NQR maturation factor NqrM APT61_RS17960 67d37c74ffdb4503d7543d843ebb3108 71 PANTHER PTHR40691 3 67 6.4E-28 T 22-04-2016 APT61_RS19965 7cb3ffd57fd25b714dd688b778824d9d 378 Gene3D G3DSA:2.130.10.10 23 375 1.0E-98 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APT61_RS19965 7cb3ffd57fd25b714dd688b778824d9d 378 Pfam PF10282 Lactonase, 7-bladed beta-propeller 25 375 3.8E-103 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 APT61_RS19965 7cb3ffd57fd25b714dd688b778824d9d 378 SUPERFAMILY SSF51004 43 376 3.92E-37 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain APT61_RS19965 7cb3ffd57fd25b714dd688b778824d9d 378 PANTHER PTHR30344:SF1 25 372 9.5E-92 T 22-04-2016 APT61_RS19965 7cb3ffd57fd25b714dd688b778824d9d 378 PANTHER PTHR30344 25 372 9.5E-92 T 22-04-2016 APT61_RS14005 916587057fdfc724b7ad5290cb778740 57 SUPERFAMILY SSF57829 2 55 2.01E-18 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APT61_RS14005 916587057fdfc724b7ad5290cb778740 57 PANTHER PTHR35534 1 57 3.7E-28 T 22-04-2016 APT61_RS14005 916587057fdfc724b7ad5290cb778740 57 Pfam PF01783 Ribosomal L32p protein family 2 56 3.5E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APT61_RS14005 916587057fdfc724b7ad5290cb778740 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 2.2E-18 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APT61_RS14005 916587057fdfc724b7ad5290cb778740 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 16.363 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 APT61_RS07360 8497759f1eca2bcc5bc8cd59bb3e6226 585 SUPERFAMILY SSF56176 10 271 8.88E-75 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APT61_RS07360 8497759f1eca2bcc5bc8cd59bb3e6226 585 PANTHER PTHR11748 8 191 3.2E-64 T 22-04-2016 APT61_RS07360 8497759f1eca2bcc5bc8cd59bb3e6226 585 PANTHER PTHR11748 242 327 3.2E-64 T 22-04-2016 APT61_RS07360 8497759f1eca2bcc5bc8cd59bb3e6226 585 PIRSF PIRSF000101 4 569 4.0E-302 T 22-04-2016 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APT61_RS07360 8497759f1eca2bcc5bc8cd59bb3e6226 585 PANTHER PTHR11748:SF82 8 191 3.2E-64 T 22-04-2016 APT61_RS07360 8497759f1eca2bcc5bc8cd59bb3e6226 585 PANTHER PTHR11748:SF82 242 327 3.2E-64 T 22-04-2016 APT61_RS07360 8497759f1eca2bcc5bc8cd59bb3e6226 585 Gene3D G3DSA:3.30.465.10 107 268 2.8E-83 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APT61_RS07360 8497759f1eca2bcc5bc8cd59bb3e6226 585 Pfam PF01565 FAD binding domain 47 166 2.2E-8 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 APT61_RS07360 8497759f1eca2bcc5bc8cd59bb3e6226 585 Gene3D G3DSA:3.30.70.610 377 434 8.2E-22 T 22-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APT61_RS07360 8497759f1eca2bcc5bc8cd59bb3e6226 585 Gene3D G3DSA:3.30.70.610 269 342 1.8E-24 T 22-04-2016 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APT61_RS07360 8497759f1eca2bcc5bc8cd59bb3e6226 585 Gene3D G3DSA:3.30.1370.20 435 518 4.4E-47 T 22-04-2016 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APT61_RS07360 8497759f1eca2bcc5bc8cd59bb3e6226 585 Gene3D G3DSA:3.30.43.10 7 101 1.5E-7 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 APT61_RS07360 8497759f1eca2bcc5bc8cd59bb3e6226 585 SUPERFAMILY SSF55103 276 567 1.68E-116 T 22-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 APT61_RS07360 8497759f1eca2bcc5bc8cd59bb3e6226 585 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 6.6E-147 T 22-04-2016 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 APT61_RS08745 4113b826b382fae829f4436ff03cd28a 263 Gene3D G3DSA:1.10.10.10 12 85 7.6E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS08745 4113b826b382fae829f4436ff03cd28a 263 SMART SM00346 13 102 5.7E-37 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APT61_RS08745 4113b826b382fae829f4436ff03cd28a 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 1.2E-47 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal APT61_RS08745 4113b826b382fae829f4436ff03cd28a 263 SUPERFAMILY SSF55781 77 258 3.92E-56 T 22-04-2016 IPR029016 GAF domain-like APT61_RS08745 4113b826b382fae829f4436ff03cd28a 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 1.7E-13 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APT61_RS08745 4113b826b382fae829f4436ff03cd28a 263 SUPERFAMILY SSF46785 13 86 1.02E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS08745 4113b826b382fae829f4436ff03cd28a 263 PANTHER PTHR30136:SF7 1 263 2.8E-131 T 22-04-2016 APT61_RS08745 4113b826b382fae829f4436ff03cd28a 263 PANTHER PTHR30136 1 263 2.8E-131 T 22-04-2016 APT61_RS08745 4113b826b382fae829f4436ff03cd28a 263 Gene3D G3DSA:3.30.450.40 86 260 3.1E-71 T 22-04-2016 IPR029016 GAF domain-like APT61_RS17845 9328c9ab6dcad3e3a02080db118c211a 224 Gene3D G3DSA:1.10.150.120 130 222 6.5E-32 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APT61_RS17845 9328c9ab6dcad3e3a02080db118c211a 224 SUPERFAMILY SSF47741 139 222 2.49E-27 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APT61_RS17845 9328c9ab6dcad3e3a02080db118c211a 224 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 18 41 2.0E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APT61_RS17845 9328c9ab6dcad3e3a02080db118c211a 224 PANTHER PTHR11908:SF66 54 205 8.3E-37 T 22-04-2016 APT61_RS17845 9328c9ab6dcad3e3a02080db118c211a 224 SUPERFAMILY SSF54292 56 142 2.88E-27 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS17845 9328c9ab6dcad3e3a02080db118c211a 224 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 94 102 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APT61_RS17845 9328c9ab6dcad3e3a02080db118c211a 224 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 18 36 5.4E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APT61_RS17845 9328c9ab6dcad3e3a02080db118c211a 224 Pfam PF01799 [2Fe-2S] binding domain 128 215 7.8E-30 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 APT61_RS17845 9328c9ab6dcad3e3a02080db118c211a 224 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 61 110 1.9E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS17845 9328c9ab6dcad3e3a02080db118c211a 224 PANTHER PTHR11908 54 205 8.3E-37 T 22-04-2016 APT61_RS17845 9328c9ab6dcad3e3a02080db118c211a 224 Gene3D G3DSA:3.10.20.30 55 129 6.0E-33 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS13430 1cbf7ea7602b3ad994df782ddecf3576 644 PANTHER PTHR30267:SF2 1 644 0.0 T 22-04-2016 APT61_RS13430 1cbf7ea7602b3ad994df782ddecf3576 644 PANTHER PTHR30267 1 644 0.0 T 22-04-2016 APT61_RS13430 1cbf7ea7602b3ad994df782ddecf3576 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 1.5E-75 T 22-04-2016 IPR010650 PrkA C-terminal domain APT61_RS13430 1cbf7ea7602b3ad994df782ddecf3576 644 Pfam PF08298 PrkA AAA domain 20 380 8.2E-179 T 22-04-2016 IPR013153 PrkA AAA domain APT61_RS13430 1cbf7ea7602b3ad994df782ddecf3576 644 Gene3D G3DSA:3.40.50.300 243 329 4.0E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13430 1cbf7ea7602b3ad994df782ddecf3576 644 Gene3D G3DSA:3.40.50.300 75 170 4.0E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13430 1cbf7ea7602b3ad994df782ddecf3576 644 PIRSF PIRSF000549 1 644 5.6E-293 T 22-04-2016 IPR016230 Serine-protein kinase, PrkA GO:0004672 APT61_RS13430 1cbf7ea7602b3ad994df782ddecf3576 644 SMART SM00763 19 380 3.7E-216 T 22-04-2016 IPR013153 PrkA AAA domain APT61_RS13430 1cbf7ea7602b3ad994df782ddecf3576 644 SUPERFAMILY SSF52540 75 145 1.07E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13430 1cbf7ea7602b3ad994df782ddecf3576 644 SUPERFAMILY SSF52540 246 368 1.07E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10870 b084394b41afb3e49dd4a5be9a9f973b 76 Gene3D G3DSA:3.30.429.20 1 53 1.3E-10 T 22-04-2016 APT61_RS10870 b084394b41afb3e49dd4a5be9a9f973b 76 Hamap MF_00718 Tautomerase PptA [pptA]. 1 76 30.432 T 22-04-2016 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 APT61_RS10870 b084394b41afb3e49dd4a5be9a9f973b 76 SUPERFAMILY SSF55331 2 75 1.2E-16 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily APT61_RS10870 b084394b41afb3e49dd4a5be9a9f973b 76 Pfam PF01361 Tautomerase enzyme 2 52 5.1E-13 T 22-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 APT61_RS10870 b084394b41afb3e49dd4a5be9a9f973b 76 PIRSF PIRSF037799 1 76 3.7E-31 T 22-04-2016 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 APT61_RS19545 db7b7e87e8414c6ddf084b7fc948a148 355 Pfam PF11168 Protein of unknown function (DUF2955) 25 164 3.3E-38 T 22-04-2016 IPR022604 Protein of unknown function DUF2955 APT61_RS19545 db7b7e87e8414c6ddf084b7fc948a148 355 PIRSF PIRSF029594 18 353 3.4E-103 T 22-04-2016 IPR016926 Uncharacterised conserved protein UCP029594 APT61_RS15175 070177de6e1b88139f6707b31a21d43f 265 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 21 109 6.4E-30 T 22-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APT61_RS15175 070177de6e1b88139f6707b31a21d43f 265 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 198 209 5.0E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APT61_RS15175 070177de6e1b88139f6707b31a21d43f 265 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 187 197 5.0E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APT61_RS15175 070177de6e1b88139f6707b31a21d43f 265 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 130 147 5.0E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APT61_RS15175 070177de6e1b88139f6707b31a21d43f 265 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 210 225 5.0E-26 T 22-04-2016 IPR014032 Peptidase A24A, prepilin type IV, bacterial KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- APT61_RS15175 070177de6e1b88139f6707b31a21d43f 265 Pfam PF01478 Type IV leader peptidase family 122 226 4.0E-23 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 APT61_RS15175 070177de6e1b88139f6707b31a21d43f 265 PANTHER PTHR30487 3 263 7.7E-80 T 22-04-2016 APT61_RS15175 070177de6e1b88139f6707b31a21d43f 265 PANTHER PTHR30487:SF0 3 263 7.7E-80 T 22-04-2016 APT61_RS20725 388bf00eaeb73edf6ef09d7317d9365f 504 PANTHER PTHR24220 8 380 1.8E-193 T 22-04-2016 APT61_RS20725 388bf00eaeb73edf6ef09d7317d9365f 504 SMART SM00382 31 218 8.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS20725 388bf00eaeb73edf6ef09d7317d9365f 504 SMART SM00382 280 474 5.4E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS20725 388bf00eaeb73edf6ef09d7317d9365f 504 Pfam PF00005 ABC transporter 272 425 2.3E-19 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS20725 388bf00eaeb73edf6ef09d7317d9365f 504 Pfam PF00005 ABC transporter 22 171 4.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS20725 388bf00eaeb73edf6ef09d7317d9365f 504 SUPERFAMILY SSF52540 5 231 2.88E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20725 388bf00eaeb73edf6ef09d7317d9365f 504 Gene3D G3DSA:3.40.50.300 3 237 2.0E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20725 388bf00eaeb73edf6ef09d7317d9365f 504 Gene3D G3DSA:3.40.50.300 272 491 1.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20725 388bf00eaeb73edf6ef09d7317d9365f 504 SUPERFAMILY SSF52540 271 486 3.73E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20725 388bf00eaeb73edf6ef09d7317d9365f 504 PANTHER PTHR24220:SF416 8 380 1.8E-193 T 22-04-2016 APT61_RS20725 388bf00eaeb73edf6ef09d7317d9365f 504 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 SUPERFAMILY SSF52540 292 342 1.04E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 SUPERFAMILY SSF52540 507 652 1.04E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 PANTHER PTHR24031:SF249 299 602 2.2E-125 T 22-04-2016 APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 PANTHER PTHR24031:SF249 19 52 2.2E-125 T 22-04-2016 APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 PANTHER PTHR24031:SF249 175 282 2.2E-125 T 22-04-2016 APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 PANTHER PTHR24031:SF249 654 689 2.2E-125 T 22-04-2016 APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 Gene3D G3DSA:3.40.50.300 253 453 1.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 Gene3D G3DSA:3.40.50.300 454 637 1.2E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 SMART SM00490 504 588 6.3E-22 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 PANTHER PTHR24031 299 602 2.2E-125 T 22-04-2016 APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 PANTHER PTHR24031 19 52 2.2E-125 T 22-04-2016 APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 PANTHER PTHR24031 175 282 2.2E-125 T 22-04-2016 APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 PANTHER PTHR24031 654 689 2.2E-125 T 22-04-2016 APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 663 3.4E-248 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 Gene3D G3DSA:2.40.50.140 47 138 1.5E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 Pfam PF00270 DEAD/DEAH box helicase 293 434 3.5E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 SMART SM00487 265 459 1.9E-29 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 Gene3D G3DSA:1.10.150.20 5 37 2.5E-4 T 22-04-2016 APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 Pfam PF17191 RecG wedge domain 14 172 6.4E-22 T 22-04-2016 IPR033454 RecG, wedge domain APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 Pfam PF00271 Helicase conserved C-terminal domain 478 587 8.5E-19 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 SUPERFAMILY SSF50249 9 176 6.68E-43 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS21755 93532f36d38e1cf8a310ed10a137ba6c 692 SUPERFAMILY SSF52540 207 453 8.2E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04590 0209c3bd21f225e0da3f2db13c7a4c7a 451 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 27 436 9.2E-161 T 22-04-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 APT61_RS04590 0209c3bd21f225e0da3f2db13c7a4c7a 451 PANTHER PTHR11662 8 445 8.2E-238 T 22-04-2016 APT61_RS04590 0209c3bd21f225e0da3f2db13c7a4c7a 451 Pfam PF07690 Major Facilitator Superfamily 25 318 3.2E-48 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS04590 0209c3bd21f225e0da3f2db13c7a4c7a 451 Gene3D G3DSA:1.20.1250.20 245 445 7.9E-33 T 22-04-2016 APT61_RS04590 0209c3bd21f225e0da3f2db13c7a4c7a 451 PANTHER PTHR11662:SF18 8 445 8.2E-238 T 22-04-2016 APT61_RS04590 0209c3bd21f225e0da3f2db13c7a4c7a 451 PIRSF PIRSF002808 2 450 7.3E-45 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APT61_RS04590 0209c3bd21f225e0da3f2db13c7a4c7a 451 Gene3D G3DSA:1.20.1250.20 13 213 1.1E-45 T 22-04-2016 APT61_RS04590 0209c3bd21f225e0da3f2db13c7a4c7a 451 SUPERFAMILY SSF103473 12 445 1.24E-81 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS10760 6fe6b8a8d4fa9790b31286cbbba99361 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 1.8E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS10760 6fe6b8a8d4fa9790b31286cbbba99361 222 PANTHER PTHR11751 12 103 2.8E-12 T 22-04-2016 APT61_RS10760 6fe6b8a8d4fa9790b31286cbbba99361 222 Gene3D G3DSA:1.10.10.10 5 77 1.7E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10760 6fe6b8a8d4fa9790b31286cbbba99361 222 SUPERFAMILY SSF48008 86 217 8.89E-19 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS10760 6fe6b8a8d4fa9790b31286cbbba99361 222 SMART SM00895 87 211 2.9E-12 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS10760 6fe6b8a8d4fa9790b31286cbbba99361 222 Gene3D G3DSA:1.20.120.530 86 218 1.1E-19 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS10760 6fe6b8a8d4fa9790b31286cbbba99361 222 Pfam PF07729 FCD domain 90 209 1.1E-19 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS10760 6fe6b8a8d4fa9790b31286cbbba99361 222 SMART SM00345 19 77 1.8E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS10760 6fe6b8a8d4fa9790b31286cbbba99361 222 SUPERFAMILY SSF46785 9 101 2.86E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00410 d97e59418880627922c76030fedf394e 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 305 1.5E-41 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS00410 d97e59418880627922c76030fedf394e 333 PANTHER PTHR32196 4 329 2.4E-76 T 22-04-2016 APT61_RS00410 d97e59418880627922c76030fedf394e 333 PANTHER PTHR32196:SF35 4 329 2.4E-76 T 22-04-2016 APT61_RS19955 1ff3bd2cbcf2e6eb43bba6fa076a69ec 154 PANTHER PTHR30352:SF2 1 154 1.2E-72 T 22-04-2016 APT61_RS19955 1ff3bd2cbcf2e6eb43bba6fa076a69ec 154 SUPERFAMILY SSF102114 16 125 2.55E-7 T 22-04-2016 APT61_RS19955 1ff3bd2cbcf2e6eb43bba6fa076a69ec 154 PANTHER PTHR30352 1 154 1.2E-72 T 22-04-2016 APT61_RS19955 1ff3bd2cbcf2e6eb43bba6fa076a69ec 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 6.4E-64 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- APT61_RS19955 1ff3bd2cbcf2e6eb43bba6fa076a69ec 154 Gene3D G3DSA:3.20.20.70 22 129 1.9E-8 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS19955 1ff3bd2cbcf2e6eb43bba6fa076a69ec 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 2.3E-51 T 22-04-2016 APT61_RS19955 1ff3bd2cbcf2e6eb43bba6fa076a69ec 154 PIRSF PIRSF000368 1 154 1.1E-59 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- APT61_RS19955 1ff3bd2cbcf2e6eb43bba6fa076a69ec 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APT61_RS09670 b0c70030cdb0fb125d01423ae3a8b249 222 Pfam PF04012 PspA/IM30 family 2 216 1.7E-48 T 22-04-2016 IPR007157 PspA/IM30 APT61_RS09670 b0c70030cdb0fb125d01423ae3a8b249 222 PANTHER PTHR31088 2 221 8.8E-126 T 22-04-2016 APT61_RS09670 b0c70030cdb0fb125d01423ae3a8b249 222 PANTHER PTHR31088:SF7 2 221 8.8E-126 T 22-04-2016 APT61_RS09670 b0c70030cdb0fb125d01423ae3a8b249 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 2.3E-92 T 22-04-2016 IPR014319 Phage shock protein, PspA APT61_RS12055 41ea38146f8ef97652a1a59c2d37c791 720 PANTHER PTHR33121:SF1 467 718 1.3E-64 T 22-04-2016 APT61_RS12055 41ea38146f8ef97652a1a59c2d37c791 720 Gene3D G3DSA:3.30.70.270 302 465 1.1E-40 T 22-04-2016 APT61_RS12055 41ea38146f8ef97652a1a59c2d37c791 720 SMART SM00267 290 459 2.3E-37 T 22-04-2016 IPR000160 GGDEF domain APT61_RS12055 41ea38146f8ef97652a1a59c2d37c791 720 Pfam PF00563 EAL domain 475 705 2.5E-68 T 22-04-2016 IPR001633 EAL domain APT61_RS12055 41ea38146f8ef97652a1a59c2d37c791 720 SUPERFAMILY SSF141868 474 717 3.01E-79 T 22-04-2016 IPR001633 EAL domain APT61_RS12055 41ea38146f8ef97652a1a59c2d37c791 720 Gene3D G3DSA:3.20.20.450 473 717 4.3E-87 T 22-04-2016 IPR001633 EAL domain APT61_RS12055 41ea38146f8ef97652a1a59c2d37c791 720 Pfam PF00990 Diguanylate cyclase, GGDEF domain 300 454 2.5E-32 T 22-04-2016 IPR000160 GGDEF domain APT61_RS12055 41ea38146f8ef97652a1a59c2d37c791 720 SUPERFAMILY SSF55073 305 461 3.06E-37 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS12055 41ea38146f8ef97652a1a59c2d37c791 720 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 299 457 6.4E-31 T 22-04-2016 IPR000160 GGDEF domain APT61_RS12055 41ea38146f8ef97652a1a59c2d37c791 720 PANTHER PTHR33121 467 718 1.3E-64 T 22-04-2016 APT61_RS12055 41ea38146f8ef97652a1a59c2d37c791 720 Pfam PF05228 CHASE4 domain 61 221 3.0E-9 T 22-04-2016 IPR007892 CHASE4 APT61_RS12055 41ea38146f8ef97652a1a59c2d37c791 720 SMART SM00052 469 710 2.4E-99 T 22-04-2016 IPR001633 EAL domain APT61_RS05815 9d899f2925176392fab2801b913ed4bf 126 SUPERFAMILY SSF56214 3 125 9.94E-30 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS05815 9d899f2925176392fab2801b913ed4bf 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 2.0E-39 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS05815 9d899f2925176392fab2801b913ed4bf 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 6.6E-39 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS05815 9d899f2925176392fab2801b913ed4bf 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 1.5E-23 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS05815 9d899f2925176392fab2801b913ed4bf 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 9.1E-60 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS05815 9d899f2925176392fab2801b913ed4bf 126 Gene3D G3DSA:3.90.470.20 1 125 2.2E-41 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS05815 9d899f2925176392fab2801b913ed4bf 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.497 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 APT61_RS10845 27859bb46141dd6fa24525c546f42527 169 PANTHER PTHR13947 41 166 1.2E-18 T 22-04-2016 APT61_RS10845 27859bb46141dd6fa24525c546f42527 169 Pfam PF00583 Acetyltransferase (GNAT) family 57 133 1.0E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS10845 27859bb46141dd6fa24525c546f42527 169 SUPERFAMILY SSF55729 1 136 2.95E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS10845 27859bb46141dd6fa24525c546f42527 169 Gene3D G3DSA:3.40.630.30 6 134 2.8E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS06200 319a75155a5b30fe69a270f14159548f 237 PANTHER PTHR11609:SF2 3 236 2.8E-121 T 22-04-2016 APT61_RS06200 319a75155a5b30fe69a270f14159548f 237 Gene3D G3DSA:3.30.470.20 94 219 7.5E-50 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS06200 319a75155a5b30fe69a270f14159548f 237 SUPERFAMILY SSF56104 3 232 1.96E-75 T 22-04-2016 APT61_RS06200 319a75155a5b30fe69a270f14159548f 237 PANTHER PTHR11609 3 236 2.8E-121 T 22-04-2016 APT61_RS06200 319a75155a5b30fe69a270f14159548f 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.982 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APT61_RS06200 319a75155a5b30fe69a270f14159548f 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APT61_RS06200 319a75155a5b30fe69a270f14159548f 237 Pfam PF01259 SAICAR synthetase 6 230 7.2E-58 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APT61_RS06200 319a75155a5b30fe69a270f14159548f 237 Gene3D G3DSA:3.30.200.20 7 93 1.7E-32 T 22-04-2016 APT61_RS06200 319a75155a5b30fe69a270f14159548f 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 235 1.8E-84 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APT61_RS06200 319a75155a5b30fe69a270f14159548f 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 APT61_RS08535 5df6079c1475bb478e1125164194882e 131 PANTHER PTHR35814 1 130 8.8E-70 T 22-04-2016 APT61_RS08535 5df6079c1475bb478e1125164194882e 131 SUPERFAMILY SSF161084 2 127 3.92E-31 T 22-04-2016 APT61_RS08535 5df6079c1475bb478e1125164194882e 131 Gene3D G3DSA:1.20.120.550 3 127 1.1E-21 T 22-04-2016 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain APT61_RS08535 5df6079c1475bb478e1125164194882e 131 Pfam PF01124 MAPEG family 4 120 1.6E-24 T 22-04-2016 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein APT61_RS08535 5df6079c1475bb478e1125164194882e 131 PANTHER PTHR35814:SF2 1 130 8.8E-70 T 22-04-2016 APT61_RS01535 fc129d99a346b9133036b9ba3212c855 425 PANTHER PTHR30482:SF9 59 424 9.7E-220 T 22-04-2016 APT61_RS01535 fc129d99a346b9133036b9ba3212c855 425 Pfam PF11862 Domain of unknown function (DUF3382) 6 103 1.0E-22 T 22-04-2016 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal APT61_RS01535 fc129d99a346b9133036b9ba3212c855 425 PANTHER PTHR30482 59 424 9.7E-220 T 22-04-2016 APT61_RS01535 fc129d99a346b9133036b9ba3212c855 425 Pfam PF02653 Branched-chain amino acid transport system / permease component 112 398 3.3E-60 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS16275 9f6b123345a5749e4d8817e6e8fc50ba 406 SUPERFAMILY SSF53067 88 394 2.8E-54 T 22-04-2016 APT61_RS16275 9f6b123345a5749e4d8817e6e8fc50ba 406 Gene3D G3DSA:3.30.420.40 225 376 9.1E-48 T 22-04-2016 APT61_RS16275 9f6b123345a5749e4d8817e6e8fc50ba 406 PANTHER PTHR18964 306 403 4.3E-217 T 22-04-2016 APT61_RS16275 9f6b123345a5749e4d8817e6e8fc50ba 406 PANTHER PTHR18964 64 289 4.3E-217 T 22-04-2016 APT61_RS16275 9f6b123345a5749e4d8817e6e8fc50ba 406 Pfam PF01047 MarR family 25 63 1.0E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS16275 9f6b123345a5749e4d8817e6e8fc50ba 406 Gene3D G3DSA:1.10.10.10 14 79 1.6E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS16275 9f6b123345a5749e4d8817e6e8fc50ba 406 PANTHER PTHR18964:SF128 306 403 4.3E-217 T 22-04-2016 APT61_RS16275 9f6b123345a5749e4d8817e6e8fc50ba 406 PANTHER PTHR18964:SF128 64 289 4.3E-217 T 22-04-2016 APT61_RS16275 9f6b123345a5749e4d8817e6e8fc50ba 406 Pfam PF00480 ROK family 89 392 1.1E-94 T 22-04-2016 IPR000600 ROK family APT61_RS16275 9f6b123345a5749e4d8817e6e8fc50ba 406 ProSitePatterns PS01125 ROK family signature. 220 247 - T 22-04-2016 IPR000600 ROK family APT61_RS16275 9f6b123345a5749e4d8817e6e8fc50ba 406 Gene3D G3DSA:3.30.420.40 84 224 5.4E-33 T 22-04-2016 APT61_RS16275 9f6b123345a5749e4d8817e6e8fc50ba 406 SUPERFAMILY SSF46785 14 79 2.4E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03385 6b2724e10a4b808ccaf1d058f3b97ca4 980 PANTHER PTHR35191 1 289 3.2E-67 T 22-04-2016 APT61_RS03385 6b2724e10a4b808ccaf1d058f3b97ca4 980 Pfam PF12571 Phage tail-collar fibre protein 1 155 1.1E-43 T 22-04-2016 IPR022225 Phage tail fibre protein APT61_RS03385 6b2724e10a4b808ccaf1d058f3b97ca4 980 Pfam PF03406 Phage tail fibre repeat 174 213 5.6E-18 T 22-04-2016 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 APT61_RS11360 d55a83e2ff9c3a36bf8595d4d68e2b98 158 SUPERFAMILY SSF55729 13 142 1.96E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS11360 d55a83e2ff9c3a36bf8595d4d68e2b98 158 PANTHER PTHR10545 5 155 1.5E-56 T 22-04-2016 APT61_RS11360 d55a83e2ff9c3a36bf8595d4d68e2b98 158 Gene3D G3DSA:3.40.630.30 4 145 1.3E-35 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS11360 d55a83e2ff9c3a36bf8595d4d68e2b98 158 PANTHER PTHR10545:SF39 5 155 1.5E-56 T 22-04-2016 IPR032962 Acetyltransferase HPA2/HPA3 GO:0016746 APT61_RS11360 d55a83e2ff9c3a36bf8595d4d68e2b98 158 Pfam PF00583 Acetyltransferase (GNAT) family 66 142 1.3E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS12410 12223e91f434f52bbf162cdd4a07e592 120 Gene3D G3DSA:3.30.1330.70 2 118 1.1E-40 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APT61_RS12410 12223e91f434f52bbf162cdd4a07e592 120 PIRSF PIRSF001007 1 120 1.8E-49 T 22-04-2016 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 APT61_RS12410 12223e91f434f52bbf162cdd4a07e592 120 SUPERFAMILY SSF103084 1 117 2.62E-34 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APT61_RS12410 12223e91f434f52bbf162cdd4a07e592 120 Pfam PF05866 Endodeoxyribonuclease RusA 9 114 7.8E-20 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APT61_RS16760 7286eb85beb8b94c56e8e6d8fe294ae3 237 SUPERFAMILY SSF55729 28 197 3.61E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS16760 7286eb85beb8b94c56e8e6d8fe294ae3 237 Pfam PF13302 Acetyltransferase (GNAT) domain 51 172 1.4E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS16760 7286eb85beb8b94c56e8e6d8fe294ae3 237 Gene3D G3DSA:3.40.630.30 15 213 1.9E-49 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS16760 7286eb85beb8b94c56e8e6d8fe294ae3 237 PANTHER PTHR13256:SF22 8 220 7.8E-73 T 22-04-2016 APT61_RS16760 7286eb85beb8b94c56e8e6d8fe294ae3 237 PANTHER PTHR13256 8 220 7.8E-73 T 22-04-2016 APT61_RS09250 2eac81f9dea5b1a5a5902402a56f94cc 415 Gene3D G3DSA:3.40.190.10 165 263 3.2E-5 T 22-04-2016 APT61_RS09250 2eac81f9dea5b1a5a5902402a56f94cc 415 PANTHER PTHR30024 2 412 8.7E-139 T 22-04-2016 APT61_RS09250 2eac81f9dea5b1a5a5902402a56f94cc 415 PANTHER PTHR30024:SF7 2 412 8.7E-139 T 22-04-2016 APT61_RS09250 2eac81f9dea5b1a5a5902402a56f94cc 415 Pfam PF13379 NMT1-like family 35 286 8.6E-106 T 22-04-2016 APT61_RS09250 2eac81f9dea5b1a5a5902402a56f94cc 415 SUPERFAMILY SSF53850 41 277 1.49E-31 T 22-04-2016 APT61_RS09250 2eac81f9dea5b1a5a5902402a56f94cc 415 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 4 22 2.0E-4 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal APT61_RS19045 8f308a26e6e7ef18c9c8f9af35942c88 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.362 T 22-04-2016 IPR005583 Peroxide stress protein YaaA APT61_RS19045 8f308a26e6e7ef18c9c8f9af35942c88 257 PANTHER PTHR30283 2 254 8.1E-126 T 22-04-2016 APT61_RS19045 8f308a26e6e7ef18c9c8f9af35942c88 257 Pfam PF03883 Protein of unknown function (DUF328) 1 243 3.6E-92 T 22-04-2016 IPR005583 Peroxide stress protein YaaA APT61_RS19045 8f308a26e6e7ef18c9c8f9af35942c88 257 PANTHER PTHR30283:SF3 2 254 8.1E-126 T 22-04-2016 APT61_RS05745 4d656dae86dad7f55bf4b10ef534f67b 127 PANTHER PTHR30191:SF5 1 127 1.9E-102 T 22-04-2016 APT61_RS05745 4d656dae86dad7f55bf4b10ef534f67b 127 Gene3D G3DSA:3.20.70.20 32 126 1.0E-33 T 22-04-2016 APT61_RS05745 4d656dae86dad7f55bf4b10ef534f67b 127 SUPERFAMILY SSF51998 64 125 1.37E-23 T 22-04-2016 APT61_RS05745 4d656dae86dad7f55bf4b10ef534f67b 127 Pfam PF01228 Glycine radical 16 108 1.1E-22 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APT61_RS05745 4d656dae86dad7f55bf4b10ef534f67b 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 43.789 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA APT61_RS05745 4d656dae86dad7f55bf4b10ef534f67b 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 4.4E-69 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA APT61_RS05745 4d656dae86dad7f55bf4b10ef534f67b 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APT61_RS05745 4d656dae86dad7f55bf4b10ef534f67b 127 PANTHER PTHR30191 1 127 1.9E-102 T 22-04-2016 APT61_RS05745 4d656dae86dad7f55bf4b10ef534f67b 127 PIRSF PIRSF000378 2 127 7.3E-54 T 22-04-2016 IPR011140 Autonomous glycyl radical cofactor GrcA APT61_RS03705 40ab1ce9337b9673685621548d8d38f6 133 SUPERFAMILY SSF49464 29 64 3.92E-5 T 22-04-2016 IPR008969 Carboxypeptidase-like, regulatory domain APT61_RS03705 40ab1ce9337b9673685621548d8d38f6 133 Gene3D G3DSA:2.60.40.1120 29 64 4.2E-4 T 22-04-2016 IPR014766 Carboxypeptidase, regulatory domain APT61_RS11805 a74cfaa0b283acef1c781167be7da497 87 Pfam PF11391 Protein of unknown function (DUF2798) 25 80 1.4E-16 T 22-04-2016 IPR021529 Protein of unknown function DUF2798 APT61_RS11905 aec9e67e8a5c890103875718409714a9 821 Gene3D G3DSA:1.25.40.10 108 185 1.5E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS11905 aec9e67e8a5c890103875718409714a9 821 Gene3D G3DSA:1.25.40.10 327 394 1.5E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS11905 aec9e67e8a5c890103875718409714a9 821 Gene3D G3DSA:1.25.40.10 428 519 1.5E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS11905 aec9e67e8a5c890103875718409714a9 821 TIGRFAM TIGR03939 PGA_TPR_OMP: poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA 21 821 7.5E-255 T 22-04-2016 IPR023870 Poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA GO:0022891|GO:0042710 APT61_RS11905 aec9e67e8a5c890103875718409714a9 821 SUPERFAMILY SSF48452 429 503 1.17E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS11905 aec9e67e8a5c890103875718409714a9 821 SUPERFAMILY SSF48452 109 159 1.17E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS18000 d4672e3a0215026c64d0a93928893f55 255 PANTHER PTHR11907 1 254 1.2E-133 T 22-04-2016 APT61_RS18000 d4672e3a0215026c64d0a93928893f55 255 Gene3D G3DSA:3.60.20.10 1 249 1.6E-68 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS18000 d4672e3a0215026c64d0a93928893f55 255 SUPERFAMILY SSF56235 2 253 1.45E-52 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS18000 d4672e3a0215026c64d0a93928893f55 255 PANTHER PTHR11907:SF10 1 254 1.2E-133 T 22-04-2016 APT61_RS18000 d4672e3a0215026c64d0a93928893f55 255 Pfam PF13230 Glutamine amidotransferases class-II 1 252 8.1E-115 T 22-04-2016 IPR026869 Putative glutamine amidotransferase type 2 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 SUPERFAMILY SSF56712 1 607 2.49E-188 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 PANTHER PTHR11390 521 617 9.6E-201 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 PANTHER PTHR11390 1 503 9.6E-201 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 7.1E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 7.1E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 7.1E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 7.1E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 7.1E-26 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 632 9.5E-295 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 Pfam PF01131 DNA topoisomerase 158 593 3.7E-115 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 Gene3D G3DSA:1.10.460.10 490 606 9.3E-53 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 Gene3D G3DSA:1.10.460.10 158 217 9.3E-53 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 SMART SM00436 128 223 9.7E-38 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 PANTHER PTHR11390:SF21 521 617 9.6E-201 T 22-04-2016 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 PANTHER PTHR11390:SF21 1 503 9.6E-201 T 22-04-2016 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 Pfam PF01751 Toprim domain 3 135 5.9E-17 T 22-04-2016 IPR006171 Toprim domain APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 Gene3D G3DSA:3.40.50.140 1 154 1.4E-46 T 22-04-2016 IPR006171 Toprim domain APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 634 68.511 T 22-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 SMART SM00493 1 124 3.2E-29 T 22-04-2016 IPR006171 Toprim domain APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 Gene3D G3DSA:2.70.20.10 369 488 1.4E-48 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 Gene3D G3DSA:2.70.20.10 219 252 1.4E-48 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APT61_RS13240 8cea9970bbcb0ac9dad5b6c1d8d6dd74 634 SMART SM00437 280 558 4.4E-106 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APT61_RS06300 c042c8151f08fb74c9c247801faeb7dc 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 295 1.9E-87 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- APT61_RS06300 c042c8151f08fb74c9c247801faeb7dc 299 PANTHER PTHR30521 1 299 5.2E-134 T 22-04-2016 APT61_RS06300 c042c8151f08fb74c9c247801faeb7dc 299 PANTHER PTHR30521:SF0 1 299 5.2E-134 T 22-04-2016 APT61_RS06300 c042c8151f08fb74c9c247801faeb7dc 299 Pfam PF04261 Dyp-type peroxidase family 5 295 3.5E-94 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- APT61_RS06300 c042c8151f08fb74c9c247801faeb7dc 299 SUPERFAMILY SSF54909 1 296 1.34E-88 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS01695 ee3754088ee4f413ebe6b86f2266f6a3 227 Gene3D G3DSA:3.40.50.2020 50 226 3.0E-30 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS01695 ee3754088ee4f413ebe6b86f2266f6a3 227 SUPERFAMILY SSF53271 45 225 2.36E-37 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS01695 ee3754088ee4f413ebe6b86f2266f6a3 227 PANTHER PTHR11907 1 227 2.1E-75 T 22-04-2016 APT61_RS01695 ee3754088ee4f413ebe6b86f2266f6a3 227 PANTHER PTHR11907:SF9 1 227 2.1E-75 T 22-04-2016 APT61_RS07730 5cf9492cf52874694a6007b63ebffb52 464 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 25 464 5.8E-167 T 22-04-2016 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 APT61_RS07730 5cf9492cf52874694a6007b63ebffb52 464 SUPERFAMILY SSF51735 143 270 3.15E-6 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07730 5cf9492cf52874694a6007b63ebffb52 464 PANTHER PTHR30576 1 464 3.1E-217 T 22-04-2016 APT61_RS07730 5cf9492cf52874694a6007b63ebffb52 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 26 464 2.1E-149 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase APT61_RS07730 5cf9492cf52874694a6007b63ebffb52 464 Pfam PF13727 CoA-binding domain 66 238 2.8E-37 T 22-04-2016 APT61_RS07730 5cf9492cf52874694a6007b63ebffb52 464 Pfam PF02397 Bacterial sugar transferase 274 456 8.4E-58 T 22-04-2016 IPR003362 Bacterial sugar transferase APT61_RS07730 5cf9492cf52874694a6007b63ebffb52 464 PANTHER PTHR30576:SF0 1 464 3.1E-217 T 22-04-2016 APT61_RS11590 f8a51e44491412f2fcff203acafb31d3 397 PANTHER PTHR23535:SF1 1 396 4.6E-222 T 22-04-2016 APT61_RS11590 f8a51e44491412f2fcff203acafb31d3 397 PANTHER PTHR23535 1 396 4.6E-222 T 22-04-2016 APT61_RS11590 f8a51e44491412f2fcff203acafb31d3 397 SUPERFAMILY SSF103473 6 386 6.15E-46 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11590 f8a51e44491412f2fcff203acafb31d3 397 Pfam PF07690 Major Facilitator Superfamily 13 340 9.4E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS11590 f8a51e44491412f2fcff203acafb31d3 397 Gene3D G3DSA:1.20.1250.20 204 390 1.8E-9 T 22-04-2016 APT61_RS11590 f8a51e44491412f2fcff203acafb31d3 397 Gene3D G3DSA:1.20.1250.20 7 181 2.2E-26 T 22-04-2016 APT61_RS01230 6e8d7866546d48b6759f08072d477b18 299 Pfam PF03466 LysR substrate binding domain 89 292 2.4E-41 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS01230 6e8d7866546d48b6759f08072d477b18 299 PANTHER PTHR30537 1 299 5.1E-179 T 22-04-2016 APT61_RS01230 6e8d7866546d48b6759f08072d477b18 299 SUPERFAMILY SSF46785 4 81 1.09E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01230 6e8d7866546d48b6759f08072d477b18 299 Gene3D G3DSA:3.40.190.10 92 177 7.0E-27 T 22-04-2016 APT61_RS01230 6e8d7866546d48b6759f08072d477b18 299 Gene3D G3DSA:1.10.10.10 4 79 3.8E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01230 6e8d7866546d48b6759f08072d477b18 299 SUPERFAMILY SSF53850 90 296 6.05E-45 T 22-04-2016 APT61_RS01230 6e8d7866546d48b6759f08072d477b18 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 7.0E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS01230 6e8d7866546d48b6759f08072d477b18 299 PANTHER PTHR30537:SF11 1 299 5.1E-179 T 22-04-2016 APT61_RS01230 6e8d7866546d48b6759f08072d477b18 299 Gene3D G3DSA:3.40.190.10 178 261 5.1E-5 T 22-04-2016 APT61_RS07420 815cb4b94efd4bde260398f97f191322 110 Pfam PF11776 Nickel/cobalt transporter regulator 50 99 8.0E-17 T 22-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB APT61_RS07420 815cb4b94efd4bde260398f97f191322 110 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 35 98 3.0E-19 T 22-04-2016 IPR024572 Nickel/cobalt homeostasis protein RcnB APT61_RS05740 76b9b6ba99b99aa3f07e53bcf1c6b204 229 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 3.3E-90 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APT61_RS05740 76b9b6ba99b99aa3f07e53bcf1c6b204 229 SMART SM00987 49 210 5.9E-42 T 22-04-2016 APT61_RS05740 76b9b6ba99b99aa3f07e53bcf1c6b204 229 Gene3D G3DSA:3.40.470.10 5 221 1.9E-101 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APT61_RS05740 76b9b6ba99b99aa3f07e53bcf1c6b204 229 PANTHER PTHR11264 5 229 8.2E-173 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APT61_RS05740 76b9b6ba99b99aa3f07e53bcf1c6b204 229 SUPERFAMILY SSF52141 4 221 1.96E-95 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APT61_RS05740 76b9b6ba99b99aa3f07e53bcf1c6b204 229 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.461 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 APT61_RS05740 76b9b6ba99b99aa3f07e53bcf1c6b204 229 SMART SM00986 49 210 5.9E-42 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APT61_RS05740 76b9b6ba99b99aa3f07e53bcf1c6b204 229 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 APT61_RS05740 76b9b6ba99b99aa3f07e53bcf1c6b204 229 PANTHER PTHR11264:SF10 5 229 8.2E-173 T 22-04-2016 APT61_RS05740 76b9b6ba99b99aa3f07e53bcf1c6b204 229 Pfam PF03167 Uracil DNA glycosylase superfamily 54 209 3.7E-28 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like APT61_RS12170 d85e72432e008f0aa11071aa6b5f026f 256 SMART SM00382 27 211 2.1E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS12170 d85e72432e008f0aa11071aa6b5f026f 256 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS12170 d85e72432e008f0aa11071aa6b5f026f 256 PANTHER PTHR24220 4 248 3.7E-81 T 22-04-2016 APT61_RS12170 d85e72432e008f0aa11071aa6b5f026f 256 Pfam PF00005 ABC transporter 18 167 3.7E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS12170 d85e72432e008f0aa11071aa6b5f026f 256 Gene3D G3DSA:3.40.50.300 4 228 2.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12170 d85e72432e008f0aa11071aa6b5f026f 256 PANTHER PTHR24220:SF309 4 248 3.7E-81 T 22-04-2016 APT61_RS12170 d85e72432e008f0aa11071aa6b5f026f 256 SUPERFAMILY SSF52540 3 224 5.77E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14680 9872ef0e239c512e203b9d099a6abed4 451 SUPERFAMILY SSF51735 20 159 1.44E-19 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS14680 9872ef0e239c512e203b9d099a6abed4 451 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 28 153 5.7E-7 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 APT61_RS14680 9872ef0e239c512e203b9d099a6abed4 451 PANTHER PTHR37850 1 445 1.7E-138 T 22-04-2016 APT61_RS14680 9872ef0e239c512e203b9d099a6abed4 451 SMART SM00858 366 431 0.007 T 22-04-2016 IPR013974 SAF domain APT61_RS14680 9872ef0e239c512e203b9d099a6abed4 451 PANTHER PTHR37850:SF2 1 445 1.7E-138 T 22-04-2016 APT61_RS14680 9872ef0e239c512e203b9d099a6abed4 451 Gene3D G3DSA:3.40.50.720 19 154 2.0E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10275 fcf381723c097e66703f524d70d49e6e 275 SUPERFAMILY SSF103481 180 274 1.23E-11 T 22-04-2016 APT61_RS10275 fcf381723c097e66703f524d70d49e6e 275 SUPERFAMILY SSF103481 39 135 1.57E-7 T 22-04-2016 APT61_RS10275 fcf381723c097e66703f524d70d49e6e 275 Pfam PF00892 EamA-like transporter family 142 270 3.0E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS10275 fcf381723c097e66703f524d70d49e6e 275 Pfam PF00892 EamA-like transporter family 5 130 2.6E-7 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS20435 37d1251eec8bab0988b05534876b2783 131 SUPERFAMILY SSF81343 2 131 1.85E-58 T 22-04-2016 APT61_RS20435 37d1251eec8bab0988b05534876b2783 131 Gene3D G3DSA:1.20.1300.10 3 130 1.4E-58 T 22-04-2016 APT61_RS20435 37d1251eec8bab0988b05534876b2783 131 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 111 7.0E-42 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 APT61_RS20435 37d1251eec8bab0988b05534876b2783 131 PIRSF PIRSF000180 2 130 5.6E-61 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 APT61_RS20435 37d1251eec8bab0988b05534876b2783 131 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 29.928 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 APT61_RS20435 37d1251eec8bab0988b05534876b2783 131 Pfam PF02300 Fumarate reductase subunit C 3 128 2.0E-56 T 22-04-2016 IPR003510 Fumarate reductase, subunit C GO:0016020 APT61_RS06735 e63880dc8e371cfdfc61491880af02e0 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 219 2.0E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS06735 e63880dc8e371cfdfc61491880af02e0 228 SUPERFAMILY SSF161098 7 205 6.28E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS06735 e63880dc8e371cfdfc61491880af02e0 228 PANTHER PTHR30133:SF1 1 228 7.2E-173 T 22-04-2016 IPR030199 Histidine transport system permease protein HisQ GO:0003333|GO:0016021 APT61_RS06735 e63880dc8e371cfdfc61491880af02e0 228 Gene3D G3DSA:1.10.3720.10 8 219 4.8E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS06735 e63880dc8e371cfdfc61491880af02e0 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 114 8.9E-19 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APT61_RS06735 e63880dc8e371cfdfc61491880af02e0 228 PANTHER PTHR30133 1 228 7.2E-173 T 22-04-2016 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 SUPERFAMILY SSF51735 1 179 2.15E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 PANTHER PTHR10836:SF47 1 339 6.2E-250 T 22-04-2016 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 3.8E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 3.8E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 3.8E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 3.8E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 3.8E-30 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 155 8.0E-54 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 SUPERFAMILY SSF55347 155 317 1.37E-56 T 22-04-2016 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 PIRSF PIRSF000149 1 337 5.1E-134 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 8.6E-54 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 Gene3D G3DSA:3.40.50.720 1 163 5.4E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 SMART SM00846 3 155 1.7E-81 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 PANTHER PTHR10836 1 339 6.2E-250 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 1.1E-194 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 Gene3D G3DSA:3.30.360.10 164 318 1.4E-60 T 22-04-2016 APT61_RS04050 bff302528bf5babb8c764bbd7d5f0885 339 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 65.822 T 22-04-2016 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72|UniPathway: UPA00244 APT61_RS06320 3ad29b1c441790cd8b70181fe18c505a 364 PANTHER PTHR24220 4 289 7.0E-144 T 22-04-2016 APT61_RS06320 3ad29b1c441790cd8b70181fe18c505a 364 Pfam PF00005 ABC transporter 18 164 5.1E-38 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS06320 3ad29b1c441790cd8b70181fe18c505a 364 SMART SM00382 27 214 3.8E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS06320 3ad29b1c441790cd8b70181fe18c505a 364 PANTHER PTHR24220:SF123 4 289 7.0E-144 T 22-04-2016 APT61_RS06320 3ad29b1c441790cd8b70181fe18c505a 364 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS06320 3ad29b1c441790cd8b70181fe18c505a 364 Gene3D G3DSA:3.40.50.300 3 244 2.2E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS06320 3ad29b1c441790cd8b70181fe18c505a 364 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 3.6E-129 T 22-04-2016 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 APT61_RS06320 3ad29b1c441790cd8b70181fe18c505a 364 Pfam PF12857 TOBE-like domain 291 339 1.8E-6 T 22-04-2016 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 APT61_RS06320 3ad29b1c441790cd8b70181fe18c505a 364 SUPERFAMILY SSF50331 239 346 9.64E-13 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APT61_RS06320 3ad29b1c441790cd8b70181fe18c505a 364 SUPERFAMILY SSF52540 3 244 1.1E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10330 27b2dc6d4ead587342a3c9ac8d3effb8 672 Pfam PF13899 Thioredoxin-like 550 636 8.0E-15 T 22-04-2016 APT61_RS10330 27b2dc6d4ead587342a3c9ac8d3effb8 672 Gene3D G3DSA:3.40.30.10 547 660 1.8E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS10330 27b2dc6d4ead587342a3c9ac8d3effb8 672 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 274 470 8.4E-9 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 APT61_RS10330 27b2dc6d4ead587342a3c9ac8d3effb8 672 PANTHER PTHR32234:SF3 9 665 3.9E-137 T 22-04-2016 APT61_RS10330 27b2dc6d4ead587342a3c9ac8d3effb8 672 SUPERFAMILY SSF52833 546 658 8.07E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS10330 27b2dc6d4ead587342a3c9ac8d3effb8 672 Pfam PF11412 Disulphide bond corrector protein DsbC 42 137 3.1E-15 T 22-04-2016 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain APT61_RS10330 27b2dc6d4ead587342a3c9ac8d3effb8 672 PANTHER PTHR32234 9 665 3.9E-137 T 22-04-2016 APT61_RS18050 4e175ab644083250179d2bedbd9d53b1 256 PANTHER PTHR10108 8 249 8.2E-96 T 22-04-2016 APT61_RS18050 4e175ab644083250179d2bedbd9d53b1 256 Pfam PF08241 Methyltransferase domain 49 145 4.1E-27 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APT61_RS18050 4e175ab644083250179d2bedbd9d53b1 256 PANTHER PTHR10108:SF835 8 249 8.2E-96 T 22-04-2016 APT61_RS18050 4e175ab644083250179d2bedbd9d53b1 256 Gene3D G3DSA:3.40.50.150 33 254 1.5E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS18050 4e175ab644083250179d2bedbd9d53b1 256 SUPERFAMILY SSF53335 11 243 9.21E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS20250 8d7824bd35189119fb1596a14f74f104 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 149 1.5E-32 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS20250 8d7824bd35189119fb1596a14f74f104 155 Gene3D G3DSA:3.40.930.10 6 150 2.2E-51 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS20250 8d7824bd35189119fb1596a14f74f104 155 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS20250 8d7824bd35189119fb1596a14f74f104 155 PANTHER PTHR30505:SF10 1 148 1.2E-85 T 22-04-2016 APT61_RS20250 8d7824bd35189119fb1596a14f74f104 155 SUPERFAMILY SSF55804 7 149 3.79E-36 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APT61_RS20250 8d7824bd35189119fb1596a14f74f104 155 PANTHER PTHR30505 1 148 1.2E-85 T 22-04-2016 APT61_RS07260 78c7c99d2ee64ca89058237a16838f07 332 Pfam PF13407 Periplasmic binding protein domain 28 299 1.1E-62 T 22-04-2016 IPR025997 Periplasmic binding protein APT61_RS07260 78c7c99d2ee64ca89058237a16838f07 332 Gene3D G3DSA:3.40.50.2300 143 293 5.7E-52 T 22-04-2016 APT61_RS07260 78c7c99d2ee64ca89058237a16838f07 332 Gene3D G3DSA:3.40.50.2300 27 142 3.8E-27 T 22-04-2016 APT61_RS07260 78c7c99d2ee64ca89058237a16838f07 332 PANTHER PTHR30036:SF2 4 330 1.0E-146 T 22-04-2016 APT61_RS07260 78c7c99d2ee64ca89058237a16838f07 332 SUPERFAMILY SSF53822 26 329 3.14E-83 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS07260 78c7c99d2ee64ca89058237a16838f07 332 PANTHER PTHR30036 4 330 1.0E-146 T 22-04-2016 APT61_RS09695 84642e16a0fb72a9ef82ce04d26b2522 430 Pfam PF01547 Bacterial extracellular solute-binding protein 43 325 3.6E-27 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 APT61_RS09695 84642e16a0fb72a9ef82ce04d26b2522 430 PANTHER PTHR30061 1 430 1.7E-120 T 22-04-2016 APT61_RS09695 84642e16a0fb72a9ef82ce04d26b2522 430 Gene3D G3DSA:3.40.190.10 5 141 6.3E-15 T 22-04-2016 APT61_RS09695 84642e16a0fb72a9ef82ce04d26b2522 430 Gene3D G3DSA:3.40.190.10 149 344 7.9E-33 T 22-04-2016 APT61_RS09695 84642e16a0fb72a9ef82ce04d26b2522 430 PANTHER PTHR30061:SF17 1 430 1.7E-120 T 22-04-2016 APT61_RS09695 84642e16a0fb72a9ef82ce04d26b2522 430 SUPERFAMILY SSF53850 20 426 1.58E-52 T 22-04-2016 APT61_RS14705 72a1f837d087bcc2b57aa13289b62291 219 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 213 1.1E-40 T 22-04-2016 APT61_RS14705 72a1f837d087bcc2b57aa13289b62291 219 PANTHER PTHR23291 2 219 2.4E-117 T 22-04-2016 IPR006214 Bax inhibitor 1-related APT61_RS14705 72a1f837d087bcc2b57aa13289b62291 219 PANTHER PTHR23291:SF37 2 219 2.4E-117 T 22-04-2016 APT61_RS14705 72a1f837d087bcc2b57aa13289b62291 219 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 87 117 - T 22-04-2016 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 APT61_RS06360 93c1758d84c408b8134518c4c729e1e3 328 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 320 6.2E-100 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 APT61_RS06360 93c1758d84c408b8134518c4c729e1e3 328 SMART SM00771 190 320 1.6E-71 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APT61_RS06360 93c1758d84c408b8134518c4c729e1e3 328 SUPERFAMILY SSF64383 191 324 1.19E-47 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APT61_RS06360 93c1758d84c408b8134518c4c729e1e3 328 PANTHER PTHR38685:SF1 2 328 2.0E-69 T 22-04-2016 APT61_RS06360 93c1758d84c408b8134518c4c729e1e3 328 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 322 27.254 T 22-04-2016 IPR011919 Cell division protein ZipA GO:0000917|GO:0007049|GO:0016021 APT61_RS06360 93c1758d84c408b8134518c4c729e1e3 328 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 192 328 4.0E-69 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APT61_RS06360 93c1758d84c408b8134518c4c729e1e3 328 PANTHER PTHR38685 2 328 2.0E-69 T 22-04-2016 APT61_RS06360 93c1758d84c408b8134518c4c729e1e3 328 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 193 319 1.9E-48 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APT61_RS06360 93c1758d84c408b8134518c4c729e1e3 328 Gene3D G3DSA:3.30.1400.10 189 325 5.1E-61 T 22-04-2016 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0000917|GO:0016021 APT61_RS15335 581bf6eea33971f8b8808425ac62215f 300 Gene3D G3DSA:3.30.470.20 174 277 9.3E-38 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 APT61_RS15335 581bf6eea33971f8b8808425ac62215f 300 PANTHER PTHR21621:SF0 2 289 1.2E-121 T 22-04-2016 APT61_RS15335 581bf6eea33971f8b8808425ac62215f 300 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 3.7E-94 T 22-04-2016 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 APT61_RS15335 581bf6eea33971f8b8808425ac62215f 300 Pfam PF08443 RimK-like ATP-grasp domain 97 286 3.2E-79 T 22-04-2016 IPR013651 ATP-grasp fold, RimK-type APT61_RS15335 581bf6eea33971f8b8808425ac62215f 300 PANTHER PTHR21621 2 289 1.2E-121 T 22-04-2016 APT61_RS15335 581bf6eea33971f8b8808425ac62215f 300 Gene3D G3DSA:3.40.50.20 9 111 3.4E-16 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS15335 581bf6eea33971f8b8808425ac62215f 300 SUPERFAMILY SSF56059 98 288 1.61E-50 T 22-04-2016 APT61_RS15335 581bf6eea33971f8b8808425ac62215f 300 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 54.575 T 22-04-2016 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK APT61_RS15335 581bf6eea33971f8b8808425ac62215f 300 Gene3D G3DSA:3.30.1490.20 112 173 3.9E-7 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 APT61_RS10355 3833a72c8d444e187c9271d2bd16b4bf 394 PANTHER PTHR35334 1 394 2.3E-83 T 22-04-2016 APT61_RS02565 dd2a053b72f1fec0cf60e4bd075126f0 545 SMART SM01120 381 545 5.1E-49 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APT61_RS02565 dd2a053b72f1fec0cf60e4bd075126f0 545 Gene3D G3DSA:3.30.1180.20 188 327 8.1E-37 T 22-04-2016 APT61_RS02565 dd2a053b72f1fec0cf60e4bd075126f0 545 Pfam PF02734 DAK2 domain 381 544 1.2E-37 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APT61_RS02565 dd2a053b72f1fec0cf60e4bd075126f0 545 PANTHER PTHR28629 1 545 3.8E-194 T 22-04-2016 APT61_RS02565 dd2a053b72f1fec0cf60e4bd075126f0 545 PANTHER PTHR28629:SF4 1 545 3.8E-194 T 22-04-2016 APT61_RS02565 dd2a053b72f1fec0cf60e4bd075126f0 545 SUPERFAMILY SSF101473 348 544 2.22E-46 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 APT61_RS02565 dd2a053b72f1fec0cf60e4bd075126f0 545 SUPERFAMILY SSF82549 2 327 1.18E-104 T 22-04-2016 APT61_RS02565 dd2a053b72f1fec0cf60e4bd075126f0 545 Pfam PF02733 Dak1 domain 32 323 8.2E-102 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 APT61_RS02565 dd2a053b72f1fec0cf60e4bd075126f0 545 Gene3D G3DSA:3.40.50.10440 12 185 7.8E-69 T 22-04-2016 APT61_RS16685 295bf1390ac562f4af9ca53fa6309d88 313 PANTHER PTHR32196 29 302 1.4E-81 T 22-04-2016 APT61_RS16685 295bf1390ac562f4af9ca53fa6309d88 313 SUPERFAMILY SSF53822 26 305 7.74E-77 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS16685 295bf1390ac562f4af9ca53fa6309d88 313 Gene3D G3DSA:3.40.50.2300 144 305 4.1E-50 T 22-04-2016 APT61_RS16685 295bf1390ac562f4af9ca53fa6309d88 313 Pfam PF13407 Periplasmic binding protein domain 29 283 2.7E-60 T 22-04-2016 IPR025997 Periplasmic binding protein APT61_RS16685 295bf1390ac562f4af9ca53fa6309d88 313 PANTHER PTHR32196:SF9 29 302 1.4E-81 T 22-04-2016 APT61_RS16685 295bf1390ac562f4af9ca53fa6309d88 313 Gene3D G3DSA:3.40.50.2300 25 143 6.0E-34 T 22-04-2016 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 Pfam PF00330 Aconitase family (aconitate hydratase) 69 562 7.1E-183 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 SUPERFAMILY SSF53732 10 625 9.94E-223 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 Pfam PF00694 Aconitase C-terminal domain 691 818 5.4E-51 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PANTHER PTHR11670 7 393 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PANTHER PTHR11670 416 650 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PANTHER PTHR11670 750 891 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PANTHER PTHR11670 666 711 0.0 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 Gene3D G3DSA:3.30.499.10 22 249 1.5E-78 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PANTHER PTHR11670:SF1 7 393 0.0 T 22-04-2016 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PANTHER PTHR11670:SF1 416 650 0.0 T 22-04-2016 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PANTHER PTHR11670:SF1 750 891 0.0 T 22-04-2016 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PANTHER PTHR11670:SF1 666 711 0.0 T 22-04-2016 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 890 0.0 T 22-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 Gene3D G3DSA:3.30.499.10 369 575 2.0E-62 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 Gene3D G3DSA:3.40.1060.10 250 366 8.1E-36 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PRINTS PR00415 Aconitase family signature 493 506 2.7E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PRINTS PR00415 Aconitase family signature 372 386 2.7E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PRINTS PR00415 Aconitase family signature 293 306 2.7E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PRINTS PR00415 Aconitase family signature 146 159 2.7E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PRINTS PR00415 Aconitase family signature 279 292 2.7E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PRINTS PR00415 Aconitase family signature 217 232 2.7E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PRINTS PR00415 Aconitase family signature 203 216 2.7E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PRINTS PR00415 Aconitase family signature 431 442 2.7E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 PRINTS PR00415 Aconitase family signature 170 178 2.7E-42 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 Gene3D G3DSA:3.20.19.10 636 890 7.5E-83 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT61_RS09565 7a83d1356ca76bc3ca9019b16627e0c1 891 SUPERFAMILY SSF52016 630 890 2.75E-90 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel APT61_RS03320 9e3773c7660d705ae3fae2564d6ae9dc 154 Pfam PF05926 Phage head completion protein (GPL) 16 154 2.1E-53 T 22-04-2016 IPR009225 Bacteriophage head completion protein GpL GO:0019069 APT61_RS19320 17b3e73a03065da78512f6a40f3c3422 126 PANTHER PTHR37950:SF1 2 126 1.2E-46 T 22-04-2016 APT61_RS19320 17b3e73a03065da78512f6a40f3c3422 126 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 124 9.6E-26 T 22-04-2016 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10|UniPathway: UPA00208 APT61_RS19320 17b3e73a03065da78512f6a40f3c3422 126 Gene3D G3DSA:3.30.429.10 1 126 3.5E-50 T 22-04-2016 APT61_RS19320 17b3e73a03065da78512f6a40f3c3422 126 PANTHER PTHR37950 2 126 1.2E-46 T 22-04-2016 APT61_RS19320 17b3e73a03065da78512f6a40f3c3422 126 SUPERFAMILY SSF55331 2 126 2.14E-45 T 22-04-2016 IPR014347 Tautomerase/MIF superfamily APT61_RS04505 9376259e2e21463021f8baeb086daf93 268 SUPERFAMILY SSF69572 6 260 3.01E-63 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APT61_RS04505 9376259e2e21463021f8baeb086daf93 268 Pfam PF00899 ThiF family 20 261 3.8E-36 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APT61_RS04505 9376259e2e21463021f8baeb086daf93 268 PANTHER PTHR10953:SF159 1 165 4.3E-151 T 22-04-2016 APT61_RS04505 9376259e2e21463021f8baeb086daf93 268 PANTHER PTHR10953:SF159 198 266 4.3E-151 T 22-04-2016 APT61_RS04505 9376259e2e21463021f8baeb086daf93 268 PANTHER PTHR10953 1 165 4.3E-151 T 22-04-2016 APT61_RS04505 9376259e2e21463021f8baeb086daf93 268 PANTHER PTHR10953 198 266 4.3E-151 T 22-04-2016 APT61_RS04505 9376259e2e21463021f8baeb086daf93 268 Gene3D G3DSA:3.40.50.720 5 262 3.3E-53 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00585 7d6a2179e37e12db8b6bc2fe7aa422c8 70 Pfam PF01197 Ribosomal protein L31 1 65 4.8E-30 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS00585 7d6a2179e37e12db8b6bc2fe7aa422c8 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 4.4E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS00585 7d6a2179e37e12db8b6bc2fe7aa422c8 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 4.4E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS00585 7d6a2179e37e12db8b6bc2fe7aa422c8 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.4E-22 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS00585 7d6a2179e37e12db8b6bc2fe7aa422c8 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.464 T 22-04-2016 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS00585 7d6a2179e37e12db8b6bc2fe7aa422c8 70 PANTHER PTHR33280:SF2 1 66 1.3E-35 T 22-04-2016 APT61_RS00585 7d6a2179e37e12db8b6bc2fe7aa422c8 70 PANTHER PTHR33280 1 66 1.3E-35 T 22-04-2016 APT61_RS00585 7d6a2179e37e12db8b6bc2fe7aa422c8 70 SUPERFAMILY SSF143800 1 66 2.83E-27 T 22-04-2016 APT61_RS00585 7d6a2179e37e12db8b6bc2fe7aa422c8 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS00585 7d6a2179e37e12db8b6bc2fe7aa422c8 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 6.1E-35 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS10100 973f4f625b2660a7dfacacf95b997ad8 144 Gene3D G3DSA:1.10.490.10 4 136 2.4E-27 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 APT61_RS10100 973f4f625b2660a7dfacacf95b997ad8 144 SUPERFAMILY SSF46458 7 131 8.23E-13 T 22-04-2016 IPR009050 Globin-like APT61_RS02945 555cedbb8fff1aa1978722831503c133 381 PANTHER PTHR21599:SF4 1 377 9.4E-258 T 22-04-2016 APT61_RS02945 555cedbb8fff1aa1978722831503c133 381 SUPERFAMILY SSF110738 1 375 4.32E-141 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APT61_RS02945 555cedbb8fff1aa1978722831503c133 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 2.6E-168 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APT61_RS02945 555cedbb8fff1aa1978722831503c133 381 PANTHER PTHR21599 1 377 9.4E-258 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APT61_RS02945 555cedbb8fff1aa1978722831503c133 381 PIRSF PIRSF006078 1 377 5.2E-140 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APT61_RS02945 555cedbb8fff1aa1978722831503c133 381 Pfam PF02595 Glycerate kinase family 3 373 5.0E-148 T 22-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 APT61_RS02945 555cedbb8fff1aa1978722831503c133 381 Gene3D G3DSA:3.90.1510.10 42 275 1.1E-97 T 22-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 APT61_RS20030 8ab4cadd3aed993c2bddcf91bbaecc41 457 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 450 59.544 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 APT61_RS20030 8ab4cadd3aed993c2bddcf91bbaecc41 457 SUPERFAMILY SSF53244 312 447 2.49E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS20030 8ab4cadd3aed993c2bddcf91bbaecc41 457 Pfam PF01225 Mur ligase family, catalytic domain 2 101 3.2E-19 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS20030 8ab4cadd3aed993c2bddcf91bbaecc41 457 Gene3D G3DSA:3.40.50.720 1 90 2.3E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS20030 8ab4cadd3aed993c2bddcf91bbaecc41 457 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 449 1.3E-270 T 22-04-2016 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 UniPathway: UPA00544 APT61_RS20030 8ab4cadd3aed993c2bddcf91bbaecc41 457 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 360 1.1E-8 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS20030 8ab4cadd3aed993c2bddcf91bbaecc41 457 Gene3D G3DSA:3.90.190.20 313 449 4.1E-37 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS20030 8ab4cadd3aed993c2bddcf91bbaecc41 457 PANTHER PTHR23135 1 449 0.0 T 22-04-2016 APT61_RS20030 8ab4cadd3aed993c2bddcf91bbaecc41 457 SUPERFAMILY SSF51984 1 90 1.83E-24 T 22-04-2016 APT61_RS20030 8ab4cadd3aed993c2bddcf91bbaecc41 457 Gene3D G3DSA:3.40.1190.10 92 312 4.2E-82 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS20030 8ab4cadd3aed993c2bddcf91bbaecc41 457 SUPERFAMILY SSF53623 95 308 3.4E-48 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS20030 8ab4cadd3aed993c2bddcf91bbaecc41 457 Pfam PF08245 Mur ligase middle domain 108 291 3.0E-18 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS20030 8ab4cadd3aed993c2bddcf91bbaecc41 457 PANTHER PTHR23135:SF17 1 449 0.0 T 22-04-2016 APT61_RS08425 3cc314274312a5e296d738f898d6f031 419 Gene3D G3DSA:1.10.3860.10 4 406 1.6E-100 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS08425 3cc314274312a5e296d738f898d6f031 419 PANTHER PTHR11958:SF26 5 411 2.8E-136 T 22-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 APT61_RS08425 3cc314274312a5e296d738f898d6f031 419 Pfam PF00375 Sodium:dicarboxylate symporter family 7 402 2.9E-96 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS08425 3cc314274312a5e296d738f898d6f031 419 PANTHER PTHR11958 5 411 2.8E-136 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS08425 3cc314274312a5e296d738f898d6f031 419 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 8.0E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS08425 3cc314274312a5e296d738f898d6f031 419 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 8.0E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS08425 3cc314274312a5e296d738f898d6f031 419 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 8.0E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS08425 3cc314274312a5e296d738f898d6f031 419 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 8.0E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS08425 3cc314274312a5e296d738f898d6f031 419 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 8.0E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS08425 3cc314274312a5e296d738f898d6f031 419 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 8.0E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS08425 3cc314274312a5e296d738f898d6f031 419 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 8.0E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS08425 3cc314274312a5e296d738f898d6f031 419 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 8.0E-41 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS08425 3cc314274312a5e296d738f898d6f031 419 SUPERFAMILY SSF118215 7 403 4.58E-100 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS15425 fbd9a545c5ce32652550d8831df74456 411 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 88 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS15425 fbd9a545c5ce32652550d8831df74456 411 PANTHER PTHR23502:SF43 1 404 7.4E-294 T 22-04-2016 APT61_RS15425 fbd9a545c5ce32652550d8831df74456 411 Gene3D G3DSA:1.20.1250.20 217 402 9.5E-4 T 22-04-2016 APT61_RS15425 fbd9a545c5ce32652550d8831df74456 411 Gene3D G3DSA:1.20.1250.20 22 202 3.9E-24 T 22-04-2016 APT61_RS15425 fbd9a545c5ce32652550d8831df74456 411 SUPERFAMILY SSF103473 8 401 1.96E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS15425 fbd9a545c5ce32652550d8831df74456 411 Pfam PF07690 Major Facilitator Superfamily 27 363 1.2E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS15425 fbd9a545c5ce32652550d8831df74456 411 PANTHER PTHR23502 1 404 7.4E-294 T 22-04-2016 APT61_RS18280 b4cfd3e8d79ed2d2d0fe94759c0b34b3 129 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.55 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 APT61_RS18280 b4cfd3e8d79ed2d2d0fe94759c0b34b3 129 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 1.3E-57 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 APT61_RS18280 b4cfd3e8d79ed2d2d0fe94759c0b34b3 129 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 1.0E-64 T 22-04-2016 IPR020911 Uncharacterised protein family UPF0325 APT61_RS18610 edac38cc5fab0ffd2020ddd7e417019a 354 Gene3D G3DSA:3.40.50.2000 1 195 6.9E-77 T 22-04-2016 APT61_RS18610 edac38cc5fab0ffd2020ddd7e417019a 354 PANTHER PTHR21015 2 348 1.8E-135 T 22-04-2016 APT61_RS18610 edac38cc5fab0ffd2020ddd7e417019a 354 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 343 3.6E-35 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS18610 edac38cc5fab0ffd2020ddd7e417019a 354 PANTHER PTHR21015:SF22 2 348 1.8E-135 T 22-04-2016 APT61_RS18610 edac38cc5fab0ffd2020ddd7e417019a 354 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 347 4.7E-112 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS18610 edac38cc5fab0ffd2020ddd7e417019a 354 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 8.5E-49 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS18610 edac38cc5fab0ffd2020ddd7e417019a 354 Gene3D G3DSA:3.40.50.2000 253 325 1.4E-4 T 22-04-2016 APT61_RS18610 edac38cc5fab0ffd2020ddd7e417019a 354 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 35.041 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS18610 edac38cc5fab0ffd2020ddd7e417019a 354 SUPERFAMILY SSF53756 5 348 1.28E-130 T 22-04-2016 APT61_RS15490 091ecefd1ed635f04d3313a4459f22ed 156 PANTHER PTHR33799 1 156 4.9E-75 T 22-04-2016 APT61_RS15490 091ecefd1ed635f04d3313a4459f22ed 156 Pfam PF03830 PTS system sorbose subfamily IIB component 2 149 1.3E-47 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APT61_RS15490 091ecefd1ed635f04d3313a4459f22ed 156 Gene3D G3DSA:3.40.35.10 1 154 2.4E-50 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APT61_RS15490 091ecefd1ed635f04d3313a4459f22ed 156 PANTHER PTHR33799:SF5 1 156 4.9E-75 T 22-04-2016 APT61_RS15490 091ecefd1ed635f04d3313a4459f22ed 156 SUPERFAMILY SSF52728 1 153 3.66E-46 T 22-04-2016 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 APT61_RS04800 380d59dc32d2a7f44d227087ba52412f 483 PANTHER PTHR30175:SF9 1 472 1.8E-233 T 22-04-2016 APT61_RS04800 380d59dc32d2a7f44d227087ba52412f 483 SUPERFAMILY SSF55604 8 82 1.7E-22 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS04800 380d59dc32d2a7f44d227087ba52412f 483 Gene3D G3DSA:3.30.1360.60 4 82 1.9E-28 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS04800 380d59dc32d2a7f44d227087ba52412f 483 Pfam PF00367 phosphotransferase system, EIIB 12 43 9.5E-16 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS04800 380d59dc32d2a7f44d227087ba52412f 483 Pfam PF02378 Phosphotransferase system, EIIC 113 396 1.8E-41 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS04800 380d59dc32d2a7f44d227087ba52412f 483 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 154 441 1.4E-87 T 22-04-2016 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 APT61_RS04800 380d59dc32d2a7f44d227087ba52412f 483 PANTHER PTHR30175 1 472 1.8E-233 T 22-04-2016 APT61_RS01205 1f1200b6d5d7ba26f5b60d005fe079c9 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APT61_RS01205 1f1200b6d5d7ba26f5b60d005fe079c9 309 PANTHER PTHR10584 1 305 1.2E-175 T 22-04-2016 APT61_RS01205 1f1200b6d5d7ba26f5b60d005fe079c9 309 PANTHER PTHR10584:SF57 1 305 1.2E-175 T 22-04-2016 APT61_RS01205 1f1200b6d5d7ba26f5b60d005fe079c9 309 Gene3D G3DSA:3.40.1190.20 2 304 2.6E-75 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS01205 1f1200b6d5d7ba26f5b60d005fe079c9 309 SUPERFAMILY SSF53613 2 302 1.39E-71 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS01205 1f1200b6d5d7ba26f5b60d005fe079c9 309 Pfam PF00294 pfkB family carbohydrate kinase 3 305 4.8E-71 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APT61_RS12165 f8eeb1756de96835786668285a0616aa 349 PANTHER PTHR30472 10 349 6.6E-96 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS12165 f8eeb1756de96835786668285a0616aa 349 SUPERFAMILY SSF81345 11 344 4.45E-74 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS12165 f8eeb1756de96835786668285a0616aa 349 Gene3D G3DSA:1.10.3470.10 14 348 3.1E-99 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS12165 f8eeb1756de96835786668285a0616aa 349 Pfam PF01032 FecCD transport family 30 344 1.2E-85 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS12955 e768e073d172a0c4e3572c04272f49f7 661 TIGRFAM TIGR01785 TonB-hemin: TonB-dependent heme/hemoglobin receptor family protein 31 661 6.6E-175 T 22-04-2016 IPR011276 TonB-dependent haem/haemoglobin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 APT61_RS12955 e768e073d172a0c4e3572c04272f49f7 661 PANTHER PTHR32552 12 661 0.0 T 22-04-2016 APT61_RS12955 e768e073d172a0c4e3572c04272f49f7 661 Gene3D G3DSA:2.170.130.10 31 148 3.6E-39 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS12955 e768e073d172a0c4e3572c04272f49f7 661 TIGRFAM TIGR01786 TonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein 31 661 4.3E-135 T 22-04-2016 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor GO:0004872|GO:0005215|GO:0006810|GO:0019867 APT61_RS12955 e768e073d172a0c4e3572c04272f49f7 661 PANTHER PTHR32552:SF22 12 661 0.0 T 22-04-2016 APT61_RS12955 e768e073d172a0c4e3572c04272f49f7 661 SUPERFAMILY SSF56935 31 661 6.23E-102 T 22-04-2016 APT61_RS12955 e768e073d172a0c4e3572c04272f49f7 661 Gene3D G3DSA:2.40.170.20 149 661 1.0E-74 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS12955 e768e073d172a0c4e3572c04272f49f7 661 Pfam PF00593 TonB dependent receptor 414 659 4.4E-27 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS12955 e768e073d172a0c4e3572c04272f49f7 661 Pfam PF07715 TonB-dependent Receptor Plug Domain 45 148 8.7E-25 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS16670 f22fd6b2743476c3c2d4cf71f3738663 400 Pfam PF11806 Domain of unknown function (DUF3327) 28 159 5.5E-42 T 22-04-2016 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 APT61_RS16670 f22fd6b2743476c3c2d4cf71f3738663 400 Gene3D G3DSA:3.40.50.1820 150 398 1.7E-67 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS16670 f22fd6b2743476c3c2d4cf71f3738663 400 Pfam PF00756 Putative esterase 176 394 1.4E-38 T 22-04-2016 IPR000801 Putative esterase APT61_RS16670 f22fd6b2743476c3c2d4cf71f3738663 400 Gene3D G3DSA:2.60.40.10 4 148 1.6E-49 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS16670 f22fd6b2743476c3c2d4cf71f3738663 400 PANTHER PTHR10907:SF55 68 355 2.2E-94 T 22-04-2016 APT61_RS16670 f22fd6b2743476c3c2d4cf71f3738663 400 SUPERFAMILY SSF81296 5 154 2.66E-43 T 22-04-2016 IPR014756 Immunoglobulin E-set APT61_RS16670 f22fd6b2743476c3c2d4cf71f3738663 400 SUPERFAMILY SSF53474 161 397 8.04E-47 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS16670 f22fd6b2743476c3c2d4cf71f3738663 400 PANTHER PTHR10907 68 355 2.2E-94 T 22-04-2016 APT61_RS20070 4adf401e1680b36266adc50f61a2770f 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 3.8E-54 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APT61_RS20070 4adf401e1680b36266adc50f61a2770f 175 PANTHER PTHR10286 5 175 6.8E-79 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APT61_RS20070 4adf401e1680b36266adc50f61a2770f 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 37.47 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APT61_RS20070 4adf401e1680b36266adc50f61a2770f 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APT61_RS20070 4adf401e1680b36266adc50f61a2770f 175 Gene3D G3DSA:3.90.80.10 5 174 3.5E-61 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APT61_RS20070 4adf401e1680b36266adc50f61a2770f 175 SUPERFAMILY SSF50324 4 175 4.45E-67 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 SUPERFAMILY SSF53187 341 430 8.8E-64 T 22-04-2016 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 SUPERFAMILY SSF53187 4 54 8.8E-64 T 22-04-2016 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 SUPERFAMILY SSF53187 94 242 8.8E-64 T 22-04-2016 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 419 2.4E-123 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 SUPERFAMILY SSF55031 228 335 3.53E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 Gene3D G3DSA:3.40.630.10 3 54 3.8E-74 T 22-04-2016 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 Gene3D G3DSA:3.40.630.10 93 224 3.8E-74 T 22-04-2016 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 Gene3D G3DSA:3.40.630.10 338 430 3.8E-74 T 22-04-2016 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 Pfam PF07687 Peptidase dimerisation domain 230 321 3.1E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 PIRSF PIRSF005962 1 435 2.8E-126 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 Gene3D G3DSA:3.30.70.360 229 334 4.2E-27 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 PANTHER PTHR30575 93 123 7.6E-87 T 22-04-2016 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 PANTHER PTHR30575 14 53 7.6E-87 T 22-04-2016 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 PANTHER PTHR30575 145 425 7.6E-87 T 22-04-2016 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 PANTHER PTHR30575:SF3 93 123 7.6E-87 T 22-04-2016 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 PANTHER PTHR30575:SF3 14 53 7.6E-87 T 22-04-2016 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 PANTHER PTHR30575:SF3 145 425 7.6E-87 T 22-04-2016 APT61_RS12090 4aeedf5230e2436e0de837372b6a90fe 436 Pfam PF01546 Peptidase family M20/M25/M40 112 428 3.0E-27 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 APT61_RS17800 03506eef4663ea8188f755d9d38dc3e2 233 PANTHER PTHR11751 9 92 5.8E-15 T 22-04-2016 APT61_RS17800 03506eef4663ea8188f755d9d38dc3e2 233 SUPERFAMILY SSF46785 7 70 3.22E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17800 03506eef4663ea8188f755d9d38dc3e2 233 Gene3D G3DSA:1.10.10.10 7 66 5.9E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17800 03506eef4663ea8188f755d9d38dc3e2 233 PANTHER PTHR11751:SF362 9 92 5.8E-15 T 22-04-2016 APT61_RS17800 03506eef4663ea8188f755d9d38dc3e2 233 Pfam PF07729 FCD domain 84 204 5.2E-17 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS17800 03506eef4663ea8188f755d9d38dc3e2 233 Gene3D G3DSA:1.20.120.530 86 210 4.6E-14 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS17800 03506eef4663ea8188f755d9d38dc3e2 233 SMART SM00345 8 66 5.2E-12 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS17800 03506eef4663ea8188f755d9d38dc3e2 233 SUPERFAMILY SSF48008 87 210 1.6E-14 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS17800 03506eef4663ea8188f755d9d38dc3e2 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 66 3.4E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS17800 03506eef4663ea8188f755d9d38dc3e2 233 SMART SM00895 76 205 2.7E-8 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS19110 af2e4e1b8cd0f48c98f117c560b54f06 555 Pfam PF12848 ABC transporter 230 306 2.2E-11 T 22-04-2016 IPR032781 ABC-transporter extension domain APT61_RS19110 af2e4e1b8cd0f48c98f117c560b54f06 555 Pfam PF00005 ABC transporter 340 473 6.6E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS19110 af2e4e1b8cd0f48c98f117c560b54f06 555 Pfam PF00005 ABC transporter 22 191 2.5E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS19110 af2e4e1b8cd0f48c98f117c560b54f06 555 SUPERFAMILY SSF52540 11 243 4.46E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19110 af2e4e1b8cd0f48c98f117c560b54f06 555 PANTHER PTHR19211 3 555 0.0 T 22-04-2016 APT61_RS19110 af2e4e1b8cd0f48c98f117c560b54f06 555 SUPERFAMILY SSF52540 302 526 8.6E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19110 af2e4e1b8cd0f48c98f117c560b54f06 555 SMART SM00382 31 236 5.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS19110 af2e4e1b8cd0f48c98f117c560b54f06 555 SMART SM00382 348 522 1.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS19110 af2e4e1b8cd0f48c98f117c560b54f06 555 Gene3D G3DSA:3.40.50.300 11 109 1.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19110 af2e4e1b8cd0f48c98f117c560b54f06 555 Gene3D G3DSA:3.40.50.300 141 286 1.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19110 af2e4e1b8cd0f48c98f117c560b54f06 555 Gene3D G3DSA:3.40.50.300 322 535 7.9E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19110 af2e4e1b8cd0f48c98f117c560b54f06 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 3.1E-294 T 22-04-2016 IPR022374 ABC transporter, ATP-binding protein, ChvD APT61_RS19110 af2e4e1b8cd0f48c98f117c560b54f06 555 PANTHER PTHR19211:SF7 3 555 0.0 T 22-04-2016 APT61_RS19110 af2e4e1b8cd0f48c98f117c560b54f06 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS03870 7cde9a9ba7a9c7b13cac168fb2f98ef3 457 PANTHER PTHR30175 1 457 4.1E-117 T 22-04-2016 APT61_RS03870 7cde9a9ba7a9c7b13cac168fb2f98ef3 457 Pfam PF00367 phosphotransferase system, EIIB 9 41 9.8E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS03870 7cde9a9ba7a9c7b13cac168fb2f98ef3 457 SUPERFAMILY SSF55604 7 81 1.31E-22 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS03870 7cde9a9ba7a9c7b13cac168fb2f98ef3 457 Gene3D G3DSA:3.30.1360.60 3 81 5.7E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS03870 7cde9a9ba7a9c7b13cac168fb2f98ef3 457 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS03870 7cde9a9ba7a9c7b13cac168fb2f98ef3 457 PANTHER PTHR30175:SF1 1 457 4.1E-117 T 22-04-2016 APT61_RS03870 7cde9a9ba7a9c7b13cac168fb2f98ef3 457 Pfam PF02378 Phosphotransferase system, EIIC 108 394 6.0E-33 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS17645 858c99cc54c536953788597f0fade97f 570 Pfam PF01553 Acyltransferase 66 191 4.8E-9 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APT61_RS17645 858c99cc54c536953788597f0fade97f 570 SUPERFAMILY SSF55729 312 459 1.82E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS17645 858c99cc54c536953788597f0fade97f 570 SMART SM00563 77 194 1.4E-7 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APT61_RS17645 858c99cc54c536953788597f0fade97f 570 Gene3D G3DSA:3.40.630.30 307 421 9.8E-8 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS17645 858c99cc54c536953788597f0fade97f 570 PANTHER PTHR37323:SF1 48 563 2.3E-79 T 22-04-2016 APT61_RS17645 858c99cc54c536953788597f0fade97f 570 Pfam PF13444 Acetyltransferase (GNAT) domain 322 418 2.4E-23 T 22-04-2016 APT61_RS17645 858c99cc54c536953788597f0fade97f 570 SUPERFAMILY SSF69593 68 259 2.22E-12 T 22-04-2016 APT61_RS17645 858c99cc54c536953788597f0fade97f 570 PANTHER PTHR37323 48 563 2.3E-79 T 22-04-2016 APT61_RS09980 794d797284b6721b10cf35372c9dd1a4 328 SUPERFAMILY SSF51735 102 298 2.06E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS09980 794d797284b6721b10cf35372c9dd1a4 328 SUPERFAMILY SSF52283 2 135 4.35E-46 T 22-04-2016 APT61_RS09980 794d797284b6721b10cf35372c9dd1a4 328 Gene3D G3DSA:3.40.50.720 1 137 6.7E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS09980 794d797284b6721b10cf35372c9dd1a4 328 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 327 1.2E-34 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 APT61_RS09980 794d797284b6721b10cf35372c9dd1a4 328 PANTHER PTHR10996 1 326 1.4E-172 T 22-04-2016 APT61_RS09980 794d797284b6721b10cf35372c9dd1a4 328 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 APT61_RS09980 794d797284b6721b10cf35372c9dd1a4 328 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT61_RS09980 794d797284b6721b10cf35372c9dd1a4 328 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site APT61_RS09980 794d797284b6721b10cf35372c9dd1a4 328 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 1.4E-52 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 APT61_RS09980 794d797284b6721b10cf35372c9dd1a4 328 PANTHER PTHR10996:SF161 1 326 1.4E-172 T 22-04-2016 APT61_RS09980 794d797284b6721b10cf35372c9dd1a4 328 Gene3D G3DSA:3.40.50.720 138 303 1.3E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS00050 59e0f4cbf95d59741d67c6035acab270 622 PANTHER PTHR30540:SF7 16 622 2.6E-278 T 22-04-2016 APT61_RS00050 59e0f4cbf95d59741d67c6035acab270 622 PANTHER PTHR30540 16 622 2.6E-278 T 22-04-2016 APT61_RS00050 59e0f4cbf95d59741d67c6035acab270 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.516 T 22-04-2016 IPR023051 Potassium uptake protein, low affinity, Kup APT61_RS00050 59e0f4cbf95d59741d67c6035acab270 622 Pfam PF02705 K+ potassium transporter 14 544 8.6E-208 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 APT61_RS00050 59e0f4cbf95d59741d67c6035acab270 622 TIGRFAM TIGR00794 kup: potassium uptake protein 95 550 7.1E-197 T 22-04-2016 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 APT61_RS08660 7cfb946d811ac14bd8c3f2b139c9ffee 218 SUPERFAMILY SSF56317 5 198 3.27E-18 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APT61_RS08660 7cfb946d811ac14bd8c3f2b139c9ffee 218 Pfam PF00795 Carbon-nitrogen hydrolase 6 92 2.6E-7 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APT61_RS08660 7cfb946d811ac14bd8c3f2b139c9ffee 218 Gene3D G3DSA:3.60.110.10 5 106 6.1E-12 T 22-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 APT61_RS21470 7090a41d53312e4b77f99895841e2823 320 Gene3D G3DSA:3.40.190.10 170 267 1.3E-9 T 22-04-2016 APT61_RS21470 7090a41d53312e4b77f99895841e2823 320 SUPERFAMILY SSF53850 94 307 1.99E-21 T 22-04-2016 APT61_RS21470 7090a41d53312e4b77f99895841e2823 320 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 7.3E-13 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS21470 7090a41d53312e4b77f99895841e2823 320 Gene3D G3DSA:1.10.10.10 7 91 9.8E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS21470 7090a41d53312e4b77f99895841e2823 320 SUPERFAMILY SSF46785 2 116 5.12E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS21470 7090a41d53312e4b77f99895841e2823 320 Pfam PF03466 LysR substrate binding domain 146 300 8.8E-16 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS21470 7090a41d53312e4b77f99895841e2823 320 PANTHER PTHR30419:SF0 1 317 5.5E-119 T 22-04-2016 APT61_RS21470 7090a41d53312e4b77f99895841e2823 320 PANTHER PTHR30419 1 317 5.5E-119 T 22-04-2016 APT61_RS02220 6559281cb39dd21761a93176fe4f490b 169 PANTHER PTHR10458:SF10 1 168 4.5E-108 T 22-04-2016 APT61_RS02220 6559281cb39dd21761a93176fe4f490b 169 Gene3D G3DSA:3.90.45.10 5 165 7.6E-63 T 22-04-2016 IPR023635 Peptide deformylase APT61_RS02220 6559281cb39dd21761a93176fe4f490b 169 PRINTS PR01576 Peptide deformylase signature 89 100 3.3E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APT61_RS02220 6559281cb39dd21761a93176fe4f490b 169 PRINTS PR01576 Peptide deformylase signature 120 149 3.3E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APT61_RS02220 6559281cb39dd21761a93176fe4f490b 169 PRINTS PR01576 Peptide deformylase signature 33 62 3.3E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APT61_RS02220 6559281cb39dd21761a93176fe4f490b 169 PRINTS PR01576 Peptide deformylase signature 101 119 3.3E-38 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APT61_RS02220 6559281cb39dd21761a93176fe4f490b 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 3.8E-65 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APT61_RS02220 6559281cb39dd21761a93176fe4f490b 169 SUPERFAMILY SSF56420 2 165 2.49E-61 T 22-04-2016 IPR023635 Peptide deformylase APT61_RS02220 6559281cb39dd21761a93176fe4f490b 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 31.486 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APT61_RS02220 6559281cb39dd21761a93176fe4f490b 169 PIRSF PIRSF004749 1 169 2.0E-55 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APT61_RS02220 6559281cb39dd21761a93176fe4f490b 169 PANTHER PTHR10458 1 168 4.5E-108 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 APT61_RS02220 6559281cb39dd21761a93176fe4f490b 169 Pfam PF01327 Polypeptide deformylase 4 152 2.9E-50 T 22-04-2016 IPR023635 Peptide deformylase APT61_RS14750 4831524fd2f6ed65758ee7f73a4d72a0 148 PANTHER PTHR31503 1 147 2.6E-61 T 22-04-2016 APT61_RS14750 4831524fd2f6ed65758ee7f73a4d72a0 148 PIRSF PIRSF028777 1 139 2.1E-54 T 22-04-2016 IPR031308 Uncharacterised conserved protein UCP028777 APT61_RS14750 4831524fd2f6ed65758ee7f73a4d72a0 148 Pfam PF03733 Inner membrane component domain 4 53 1.6E-10 T 22-04-2016 IPR005185 Inner membrane component domain APT61_RS14750 4831524fd2f6ed65758ee7f73a4d72a0 148 Pfam PF03733 Inner membrane component domain 77 127 8.6E-19 T 22-04-2016 IPR005185 Inner membrane component domain APT61_RS06775 00cad295cce51a2c37fbdccf84198f17 183 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 161 1.4E-23 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type APT61_RS06775 00cad295cce51a2c37fbdccf84198f17 183 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 163 1.4E-41 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 APT61_RS06775 00cad295cce51a2c37fbdccf84198f17 183 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 120 144 - T 22-04-2016 IPR020935 Phosphodiesterase YfcE, conserved site KEGG: 00564+3.1.4.-|KEGG: 00565+3.1.4.- APT61_RS06775 00cad295cce51a2c37fbdccf84198f17 183 Gene3D G3DSA:3.60.21.10 1 164 4.3E-45 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS06775 00cad295cce51a2c37fbdccf84198f17 183 PANTHER PTHR11124:SF14 1 161 3.9E-61 T 22-04-2016 APT61_RS06775 00cad295cce51a2c37fbdccf84198f17 183 SUPERFAMILY SSF56300 1 163 4.32E-37 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS06775 00cad295cce51a2c37fbdccf84198f17 183 PANTHER PTHR11124 1 161 3.9E-61 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 APT61_RS03620 0afd911ddffd8c3320ecf84129394c25 193 Gene3D G3DSA:3.40.50.1820 3 185 3.1E-18 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS03620 0afd911ddffd8c3320ecf84129394c25 193 PANTHER PTHR35602:SF3 1 193 2.4E-124 T 22-04-2016 APT61_RS03620 0afd911ddffd8c3320ecf84129394c25 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 8.0E-71 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA APT61_RS03620 0afd911ddffd8c3320ecf84129394c25 193 PANTHER PTHR35602 1 193 2.4E-124 T 22-04-2016 APT61_RS03620 0afd911ddffd8c3320ecf84129394c25 193 SUPERFAMILY SSF53474 4 188 2.48E-19 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS06715 23d820943fd3a31540fb5226af3a37dd 505 PANTHER PTHR11907 1 480 1.4E-263 T 22-04-2016 APT61_RS06715 23d820943fd3a31540fb5226af3a37dd 505 Pfam PF13522 Glutamine amidotransferase domain 64 202 1.1E-15 T 22-04-2016 APT61_RS06715 23d820943fd3a31540fb5226af3a37dd 505 Gene3D G3DSA:3.60.20.10 2 260 1.9E-64 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS06715 23d820943fd3a31540fb5226af3a37dd 505 PANTHER PTHR11907:SF0 1 480 1.4E-263 T 22-04-2016 APT61_RS06715 23d820943fd3a31540fb5226af3a37dd 505 SUPERFAMILY SSF56235 2 259 1.2E-74 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS06715 23d820943fd3a31540fb5226af3a37dd 505 Pfam PF00156 Phosphoribosyl transferase domain 286 394 4.4E-7 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 APT61_RS06715 23d820943fd3a31540fb5226af3a37dd 505 PIRSF PIRSF000485 1 483 2.2E-173 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APT61_RS06715 23d820943fd3a31540fb5226af3a37dd 505 Gene3D G3DSA:3.40.50.2020 280 446 2.1E-47 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS06715 23d820943fd3a31540fb5226af3a37dd 505 SUPERFAMILY SSF53271 252 485 2.75E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like APT61_RS06715 23d820943fd3a31540fb5226af3a37dd 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 6.4E-163 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APT61_RS06715 23d820943fd3a31540fb5226af3a37dd 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 468 45.038 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 APT61_RS18235 6c176c94d8f0bb4e97c0a15c2e4deda3 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 APT61_RS18235 6c176c94d8f0bb4e97c0a15c2e4deda3 252 PANTHER PTHR10291 18 244 8.2E-122 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APT61_RS18235 6c176c94d8f0bb4e97c0a15c2e4deda3 252 Gene3D G3DSA:3.40.1180.10 18 246 1.3E-97 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APT61_RS18235 6c176c94d8f0bb4e97c0a15c2e4deda3 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 18 243 1.0E-103 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APT61_RS18235 6c176c94d8f0bb4e97c0a15c2e4deda3 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 244 39.905 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APT61_RS18235 6c176c94d8f0bb4e97c0a15c2e4deda3 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 243 1.1E-80 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APT61_RS18235 6c176c94d8f0bb4e97c0a15c2e4deda3 252 SUPERFAMILY SSF64005 18 239 1.29E-86 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 APT61_RS00485 1f3542e73711bff919840aa738c5f8a9 329 PANTHER PTHR30368:SF2 4 329 7.5E-196 T 22-04-2016 APT61_RS00485 1f3542e73711bff919840aa738c5f8a9 329 PANTHER PTHR30368 4 329 7.5E-196 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 APT61_RS00485 1f3542e73711bff919840aa738c5f8a9 329 SUPERFAMILY SSF53850 21 326 5.02E-93 T 22-04-2016 APT61_RS00485 1f3542e73711bff919840aa738c5f8a9 329 Pfam PF13531 Bacterial extracellular solute-binding protein 41 280 6.0E-46 T 22-04-2016 APT61_RS00485 1f3542e73711bff919840aa738c5f8a9 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 APT61_RS00485 1f3542e73711bff919840aa738c5f8a9 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 12 326 3.9E-188 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 APT61_RS00485 1f3542e73711bff919840aa738c5f8a9 329 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 48 60 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 APT61_RS00485 1f3542e73711bff919840aa738c5f8a9 329 Gene3D G3DSA:3.40.190.10 21 163 6.4E-52 T 22-04-2016 APT61_RS00485 1f3542e73711bff919840aa738c5f8a9 329 Gene3D G3DSA:3.40.190.10 171 295 7.1E-32 T 22-04-2016 APT61_RS03805 a9f4f7d5bfc7fecf58a6f1762b67c9c2 350 PANTHER PTHR30535 11 139 6.8E-119 T 22-04-2016 APT61_RS03805 a9f4f7d5bfc7fecf58a6f1762b67c9c2 350 PANTHER PTHR30535 156 348 6.8E-119 T 22-04-2016 APT61_RS03805 a9f4f7d5bfc7fecf58a6f1762b67c9c2 350 PANTHER PTHR30535:SF16 11 139 6.8E-119 T 22-04-2016 APT61_RS03805 a9f4f7d5bfc7fecf58a6f1762b67c9c2 350 PANTHER PTHR30535:SF16 156 348 6.8E-119 T 22-04-2016 APT61_RS03805 a9f4f7d5bfc7fecf58a6f1762b67c9c2 350 Pfam PF01497 Periplasmic binding protein 44 297 2.3E-31 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APT61_RS03805 a9f4f7d5bfc7fecf58a6f1762b67c9c2 350 Gene3D G3DSA:3.40.50.1980 24 175 1.1E-28 T 22-04-2016 APT61_RS03805 a9f4f7d5bfc7fecf58a6f1762b67c9c2 350 Gene3D G3DSA:3.40.50.1980 176 334 4.6E-37 T 22-04-2016 APT61_RS03805 a9f4f7d5bfc7fecf58a6f1762b67c9c2 350 SUPERFAMILY SSF53807 28 347 8.24E-58 T 22-04-2016 APT61_RS21155 bdfe36af8aa4615d960b0171cf25978a 211 PANTHER PTHR20857 2 207 1.9E-70 T 22-04-2016 APT61_RS21155 bdfe36af8aa4615d960b0171cf25978a 211 Pfam PF02581 Thiamine monophosphate synthase/TENI 20 189 1.8E-54 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS21155 bdfe36af8aa4615d960b0171cf25978a 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 10 207 19.757 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS21155 bdfe36af8aa4615d960b0171cf25978a 211 SUPERFAMILY SSF51391 6 205 3.01E-64 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS21155 bdfe36af8aa4615d960b0171cf25978a 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 20 202 8.8E-57 T 22-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS21155 bdfe36af8aa4615d960b0171cf25978a 211 Gene3D G3DSA:3.20.20.70 6 205 7.7E-67 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 Pfam PF00563 EAL domain 412 644 1.7E-64 T 22-04-2016 IPR001633 EAL domain APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 SMART SM00052 405 649 2.7E-117 T 22-04-2016 IPR001633 EAL domain APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 SMART SM00091 111 177 6.2E-5 T 22-04-2016 IPR000014 PAS domain APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 Gene3D G3DSA:3.20.20.450 409 656 4.2E-87 T 22-04-2016 IPR001633 EAL domain APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 Gene3D G3DSA:3.30.70.270 239 403 1.0E-52 T 22-04-2016 APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 PANTHER PTHR10799:SF710 110 233 2.2E-93 T 22-04-2016 APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 PANTHER PTHR10799:SF710 268 504 2.2E-93 T 22-04-2016 APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 394 8.7E-35 T 22-04-2016 IPR000160 GGDEF domain APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 PANTHER PTHR10799 110 233 2.2E-93 T 22-04-2016 APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 PANTHER PTHR10799 268 504 2.2E-93 T 22-04-2016 APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 SUPERFAMILY SSF141868 412 658 7.85E-81 T 22-04-2016 IPR001633 EAL domain APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 SUPERFAMILY SSF55073 243 397 1.41E-45 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 115 233 1.7E-14 T 22-04-2016 IPR000014 PAS domain APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 Gene3D G3DSA:3.30.450.20 105 218 2.0E-20 T 22-04-2016 APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 SMART SM00267 226 395 2.5E-68 T 22-04-2016 IPR000160 GGDEF domain APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 Pfam PF13426 PAS domain 123 225 6.7E-10 T 22-04-2016 IPR000014 PAS domain APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 SUPERFAMILY SSF55785 124 234 1.16E-16 T 22-04-2016 IPR000014 PAS domain APT61_RS09620 6155645989f3dd8a49d02865b729ea29 663 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 390 5.9E-45 T 22-04-2016 IPR000160 GGDEF domain APT61_RS16695 8b08d1ee22f993282c9ef9a0768663b4 491 SUPERFAMILY SSF52540 3 217 3.36E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16695 8b08d1ee22f993282c9ef9a0768663b4 491 Pfam PF00005 ABC transporter 9 159 1.8E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS16695 8b08d1ee22f993282c9ef9a0768663b4 491 Pfam PF00005 ABC transporter 264 419 3.8E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS16695 8b08d1ee22f993282c9ef9a0768663b4 491 PANTHER PTHR24220:SF308 1 374 4.3E-161 T 22-04-2016 APT61_RS16695 8b08d1ee22f993282c9ef9a0768663b4 491 PANTHER PTHR24220 1 374 4.3E-161 T 22-04-2016 APT61_RS16695 8b08d1ee22f993282c9ef9a0768663b4 491 SMART SM00382 272 468 3.0E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS16695 8b08d1ee22f993282c9ef9a0768663b4 491 SMART SM00382 18 207 6.8E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS16695 8b08d1ee22f993282c9ef9a0768663b4 491 SUPERFAMILY SSF52540 245 471 2.08E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16695 8b08d1ee22f993282c9ef9a0768663b4 491 ProSitePatterns PS00211 ABC transporters family signature. 392 406 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS16695 8b08d1ee22f993282c9ef9a0768663b4 491 Gene3D G3DSA:3.40.50.300 245 472 9.5E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16695 8b08d1ee22f993282c9ef9a0768663b4 491 Gene3D G3DSA:3.40.50.300 3 217 1.8E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10025 097de0b6dccce37ca4b19373b3e92684 309 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 7 295 5.5E-156 T 22-04-2016 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149+1.14.13.14|KEGG: 00940+1.14.13.14|MetaCyc: PWY-5176|UniPathway: UPA00930 APT61_RS10025 097de0b6dccce37ca4b19373b3e92684 309 PANTHER PTHR30458 3 309 1.2E-177 T 22-04-2016 APT61_RS10025 097de0b6dccce37ca4b19373b3e92684 309 Gene3D G3DSA:1.20.1260.10 17 270 2.7E-101 T 22-04-2016 IPR012347 Ferritin-related APT61_RS10025 097de0b6dccce37ca4b19373b3e92684 309 SUPERFAMILY SSF47240 27 270 4.17E-81 T 22-04-2016 IPR009078 Ferritin-like superfamily APT61_RS10025 097de0b6dccce37ca4b19373b3e92684 309 Pfam PF05138 Phenylacetic acid catabolic protein 17 291 3.5E-98 T 22-04-2016 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 UniPathway: UPA00930 APT61_RS10025 097de0b6dccce37ca4b19373b3e92684 309 PANTHER PTHR30458:SF0 3 309 1.2E-177 T 22-04-2016 APT61_RS17295 3991009991cd2f7db257d878219e995a 122 PANTHER PTHR21180 50 122 5.9E-25 T 22-04-2016 APT61_RS17295 3991009991cd2f7db257d878219e995a 122 SUPERFAMILY SSF47781 46 121 1.67E-23 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 APT61_RS17295 3991009991cd2f7db257d878219e995a 122 Gene3D G3DSA:1.10.150.280 49 117 1.9E-15 T 22-04-2016 APT61_RS17295 3991009991cd2f7db257d878219e995a 122 Pfam PF12836 Helix-hairpin-helix motif 58 120 2.3E-18 T 22-04-2016 APT61_RS17295 3991009991cd2f7db257d878219e995a 122 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 57 122 4.7E-30 T 22-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain APT61_RS17295 3991009991cd2f7db257d878219e995a 122 SMART SM00278 100 119 5.2 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APT61_RS17295 3991009991cd2f7db257d878219e995a 122 SMART SM00278 70 89 170.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 SMART SM00382 28 171 4.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 PANTHER PTHR32071 1 325 3.7E-221 T 22-04-2016 APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 Gene3D G3DSA:3.40.50.300 7 179 1.2E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 Pfam PF00158 Sigma-54 interaction domain 9 170 9.0E-61 T 22-04-2016 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 22-04-2016 IPR025944 Sigma-54 interaction domain, conserved site APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 Gene3D G3DSA:1.10.10.60 273 324 5.1E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 288 305 3.5E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 305 325 3.5E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 Gene3D G3DSA:1.10.8.60 180 255 3.6E-22 T 22-04-2016 APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 Pfam PF02954 Bacterial regulatory protein, Fis family 286 321 1.1E-7 T 22-04-2016 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 SUPERFAMILY SSF46689 222 324 5.82E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 22-04-2016 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 322 3.1E-157 T 22-04-2016 IPR014317 Transcription activator PspF APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 PANTHER PTHR32071:SF38 1 325 3.7E-221 T 22-04-2016 APT61_RS09665 c14719ff5ae9d26e0f70afd528a0d36f 325 SUPERFAMILY SSF52540 10 250 6.41E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 150 3.1E-59 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 6.4E-73 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 SUPERFAMILY SSF55347 149 312 2.12E-82 T 22-04-2016 APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 PIRSF PIRSF000149 1 331 2.1E-136 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 SUPERFAMILY SSF51735 3 166 2.37E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 SMART SM00846 3 150 3.2E-94 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 Gene3D G3DSA:3.30.360.10 159 314 2.3E-87 T 22-04-2016 APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 PANTHER PTHR10836 1 331 5.3E-249 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 5.1E-48 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 5.1E-48 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 5.1E-48 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 5.1E-48 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 5.1E-48 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 8.9E-135 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 APT61_RS13280 6f61c6a04b1a3251e2be8a9ef7c30894 331 Gene3D G3DSA:3.40.50.720 1 158 2.3E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 Pfam PF00550 Phosphopantetheine attachment site 216 275 2.3E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 PANTHER PTHR11080:SF4 6 262 2.5E-166 T 22-04-2016 APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 PANTHER PTHR11080 6 262 2.5E-166 T 22-04-2016 APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 PRINTS PR01398 Isochorismatase signature 80 99 9.3E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 PRINTS PR01398 Isochorismatase signature 168 186 9.3E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 PRINTS PR01398 Isochorismatase signature 63 80 9.3E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 PRINTS PR01398 Isochorismatase signature 186 203 9.3E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 PRINTS PR01398 Isochorismatase signature 2 14 9.3E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 PRINTS PR01398 Isochorismatase signature 112 134 9.3E-51 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 Gene3D G3DSA:1.10.1200.10 235 281 4.8E-5 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 SUPERFAMILY SSF47336 215 279 5.5E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 Gene3D G3DSA:3.40.50.850 1 234 9.2E-78 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 Pfam PF00857 Isochorismatase family 32 205 4.9E-39 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 PIRSF PIRSF001111 1 284 3.2E-131 T 22-04-2016 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 APT61_RS16620 a00d6a6aed75be027057fb7ac46824c8 284 SUPERFAMILY SSF52499 1 208 2.09E-65 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS10970 3f15d6db7a40a35d78414c0a43d42a08 543 SUPERFAMILY SSF161098 284 536 7.85E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10970 3f15d6db7a40a35d78414c0a43d42a08 543 SUPERFAMILY SSF161098 3 253 2.99E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10970 3f15d6db7a40a35d78414c0a43d42a08 543 Gene3D G3DSA:1.10.3720.10 2 258 6.2E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10970 3f15d6db7a40a35d78414c0a43d42a08 543 Gene3D G3DSA:1.10.3720.10 295 541 1.5E-34 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10970 3f15d6db7a40a35d78414c0a43d42a08 543 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 357 537 1.8E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10970 3f15d6db7a40a35d78414c0a43d42a08 543 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 69 255 5.3E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10970 3f15d6db7a40a35d78414c0a43d42a08 543 PANTHER PTHR30183 1 543 5.0E-41 T 22-04-2016 APT61_RS20330 388d62f364b4ba283a65bb00f9f76663 418 PANTHER PTHR10264:SF51 13 391 6.2E-205 T 22-04-2016 IPR010201 HflK GO:0016021 APT61_RS20330 388d62f364b4ba283a65bb00f9f76663 418 Pfam PF01145 SPFH domain / Band 7 family 97 268 5.3E-31 T 22-04-2016 IPR001107 Band 7 domain APT61_RS20330 388d62f364b4ba283a65bb00f9f76663 418 PRINTS PR00721 Stomatin signature 182 199 9.1E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APT61_RS20330 388d62f364b4ba283a65bb00f9f76663 418 PRINTS PR00721 Stomatin signature 100 122 9.1E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APT61_RS20330 388d62f364b4ba283a65bb00f9f76663 418 PRINTS PR00721 Stomatin signature 147 168 9.1E-7 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APT61_RS20330 388d62f364b4ba283a65bb00f9f76663 418 SMART SM00244 93 253 7.9E-42 T 22-04-2016 IPR001107 Band 7 domain APT61_RS20330 388d62f364b4ba283a65bb00f9f76663 418 Pfam PF12221 Bacterial membrane protein N terminal 1 60 7.7E-15 T 22-04-2016 IPR020980 Menbrane protein HflK, N-terminal APT61_RS20330 388d62f364b4ba283a65bb00f9f76663 418 TIGRFAM TIGR01933 hflK: HflK protein 95 355 2.6E-125 T 22-04-2016 IPR010201 HflK GO:0016021 APT61_RS20330 388d62f364b4ba283a65bb00f9f76663 418 SUPERFAMILY SSF117892 126 257 1.26E-19 T 22-04-2016 IPR001107 Band 7 domain APT61_RS20330 388d62f364b4ba283a65bb00f9f76663 418 PANTHER PTHR10264 13 391 6.2E-205 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APT61_RS15045 9644d2eb26d40e36f04c3eb6391d8cec 1407 SUPERFAMILY SSF46785 1340 1404 5.62E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15045 9644d2eb26d40e36f04c3eb6391d8cec 1407 Pfam PF09397 Ftsk gamma domain 1342 1402 3.8E-28 T 22-04-2016 IPR018541 FtsK gamma domain APT61_RS15045 9644d2eb26d40e36f04c3eb6391d8cec 1407 Pfam PF01580 FtsK/SpoIIIE family 1025 1238 2.4E-74 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 APT61_RS15045 9644d2eb26d40e36f04c3eb6391d8cec 1407 PANTHER PTHR22683 789 1404 0.0 T 22-04-2016 APT61_RS15045 9644d2eb26d40e36f04c3eb6391d8cec 1407 PANTHER PTHR22683 1 314 0.0 T 22-04-2016 APT61_RS15045 9644d2eb26d40e36f04c3eb6391d8cec 1407 PANTHER PTHR22683 530 773 0.0 T 22-04-2016 APT61_RS15045 9644d2eb26d40e36f04c3eb6391d8cec 1407 Gene3D G3DSA:3.40.50.300 999 1305 7.2E-97 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15045 9644d2eb26d40e36f04c3eb6391d8cec 1407 PANTHER PTHR22683:SF41 789 1404 0.0 T 22-04-2016 APT61_RS15045 9644d2eb26d40e36f04c3eb6391d8cec 1407 PANTHER PTHR22683:SF41 1 314 0.0 T 22-04-2016 APT61_RS15045 9644d2eb26d40e36f04c3eb6391d8cec 1407 PANTHER PTHR22683:SF41 530 773 0.0 T 22-04-2016 APT61_RS15045 9644d2eb26d40e36f04c3eb6391d8cec 1407 SUPERFAMILY SSF52540 999 1311 3.08E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15045 9644d2eb26d40e36f04c3eb6391d8cec 1407 SMART SM00843 1340 1405 3.6E-42 T 22-04-2016 IPR018541 FtsK gamma domain APT61_RS15045 9644d2eb26d40e36f04c3eb6391d8cec 1407 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 1.6E-41 T 22-04-2016 IPR025199 DNA translocase FtsK, 4TM region APT61_RS03680 b2df3f6342e429de647e4a81c487f7f0 133 PANTHER PTHR36571:SF1 2 132 1.1E-42 T 22-04-2016 APT61_RS03680 b2df3f6342e429de647e4a81c487f7f0 133 PANTHER PTHR36571 2 132 1.1E-42 T 22-04-2016 APT61_RS03680 b2df3f6342e429de647e4a81c487f7f0 133 SUPERFAMILY SSF101756 31 130 2.62E-34 T 22-04-2016 IPR005220 Bacterial OB-fold APT61_RS03680 b2df3f6342e429de647e4a81c487f7f0 133 Pfam PF04076 Bacterial OB fold (BOF) protein 33 130 2.9E-34 T 22-04-2016 IPR005220 Bacterial OB-fold APT61_RS03680 b2df3f6342e429de647e4a81c487f7f0 133 Gene3D G3DSA:2.40.50.200 30 132 6.4E-40 T 22-04-2016 IPR005220 Bacterial OB-fold APT61_RS03680 b2df3f6342e429de647e4a81c487f7f0 133 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 131 6.5E-45 T 22-04-2016 IPR016052 Bacteriophage 933W, L0136 APT61_RS09360 a05ffb4dd5bc7ff6a6d28a228250c545 119 PANTHER PTHR33747 1 119 1.3E-28 T 22-04-2016 APT61_RS09360 a05ffb4dd5bc7ff6a6d28a228250c545 119 SUPERFAMILY SSF54427 1 96 2.63E-32 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS09360 a05ffb4dd5bc7ff6a6d28a228250c545 119 PANTHER PTHR33747:SF1 1 119 1.3E-28 T 22-04-2016 APT61_RS09360 a05ffb4dd5bc7ff6a6d28a228250c545 119 SUPERFAMILY SSF103642 99 118 2.94E-8 T 22-04-2016 APT61_RS09360 a05ffb4dd5bc7ff6a6d28a228250c545 119 Pfam PF02810 SEC-C motif 101 119 4.3E-11 T 22-04-2016 IPR004027 SEC-C motif APT61_RS09360 a05ffb4dd5bc7ff6a6d28a228250c545 119 Gene3D G3DSA:3.10.450.50 1 119 4.1E-45 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS04300 135d3a00ed300cc75a0ef45cb0d0826c 278 Pfam PF04962 KduI/IolB family 31 273 9.5E-42 T 22-04-2016 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APT61_RS04300 135d3a00ed300cc75a0ef45cb0d0826c 278 PANTHER PTHR38461 1 278 2.1E-182 T 22-04-2016 APT61_RS04300 135d3a00ed300cc75a0ef45cb0d0826c 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 57.054 T 22-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APT61_RS04300 135d3a00ed300cc75a0ef45cb0d0826c 278 SUPERFAMILY SSF51182 2 262 1.87E-109 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS04300 135d3a00ed300cc75a0ef45cb0d0826c 278 Gene3D G3DSA:2.60.120.500 133 278 3.0E-79 T 22-04-2016 IPR027447 5-keto-4-deoxyuronate isomerase, C-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APT61_RS04300 135d3a00ed300cc75a0ef45cb0d0826c 278 Gene3D G3DSA:2.60.120.520 20 132 9.9E-57 T 22-04-2016 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APT61_RS04300 135d3a00ed300cc75a0ef45cb0d0826c 278 PIRSF PIRSF006625 1 278 7.6E-134 T 22-04-2016 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507|UniPathway: UPA00545 APT61_RS03295 b3ea704db3fbb8d65d3c5b974cb62213 342 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 52 332 3.2E-105 T 22-04-2016 IPR006430 Phage portal protein PBSX family APT61_RS03295 b3ea704db3fbb8d65d3c5b974cb62213 342 PIRSF PIRSF018494 1 342 1.0E-155 T 22-04-2016 IPR030935 Phage portal protein PBSX family, Proteobacteria APT61_RS03295 b3ea704db3fbb8d65d3c5b974cb62213 342 Pfam PF04860 Phage portal protein 95 334 5.7E-14 T 22-04-2016 IPR006944 Bacteriophage/Gene transfer agent portal protein APT61_RS03140 7d7f2aad77d2152e02b267fe6fc6ef72 97 PANTHER PTHR33336:SF1 1 96 7.5E-50 T 22-04-2016 APT61_RS03140 7d7f2aad77d2152e02b267fe6fc6ef72 97 PANTHER PTHR33336 1 96 7.5E-50 T 22-04-2016 APT61_RS03140 7d7f2aad77d2152e02b267fe6fc6ef72 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 76 1.3E-19 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain APT61_RS03140 7d7f2aad77d2152e02b267fe6fc6ef72 97 Gene3D G3DSA:3.30.70.900 1 89 4.4E-28 T 22-04-2016 APT61_RS03140 7d7f2aad77d2152e02b267fe6fc6ef72 97 SUPERFAMILY SSF54909 1 91 5.37E-26 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS16775 5931a3883f0229f3438c4104cd8a536c 277 SUPERFAMILY SSF161098 72 257 3.66E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS16775 5931a3883f0229f3438c4104cd8a536c 277 PANTHER PTHR30465:SF10 6 275 1.3E-101 T 22-04-2016 APT61_RS16775 5931a3883f0229f3438c4104cd8a536c 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 274 1.5E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS16775 5931a3883f0229f3438c4104cd8a536c 277 PANTHER PTHR30465 6 275 1.3E-101 T 22-04-2016 APT61_RS16775 5931a3883f0229f3438c4104cd8a536c 277 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 5 53 1.5E-11 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT61_RS16775 5931a3883f0229f3438c4104cd8a536c 277 Gene3D G3DSA:1.10.3720.10 73 273 1.9E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS06995 ba08b222c8028a3ebf809dd41be7908e 242 PANTHER PTHR10108 1 240 5.6E-171 T 22-04-2016 APT61_RS06995 ba08b222c8028a3ebf809dd41be7908e 242 Pfam PF13489 Methyltransferase domain 57 176 6.9E-24 T 22-04-2016 APT61_RS06995 ba08b222c8028a3ebf809dd41be7908e 242 SUPERFAMILY SSF53335 18 227 3.61E-44 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS06995 ba08b222c8028a3ebf809dd41be7908e 242 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 240 38.244 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 APT61_RS06995 ba08b222c8028a3ebf809dd41be7908e 242 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 4.4E-90 T 22-04-2016 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|UniPathway: UPA00232 APT61_RS06995 ba08b222c8028a3ebf809dd41be7908e 242 Gene3D G3DSA:3.40.50.150 28 222 7.5E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS06995 ba08b222c8028a3ebf809dd41be7908e 242 PANTHER PTHR10108:SF910 1 240 5.6E-171 T 22-04-2016 APT61_RS14260 5f0608877a5206cf48505d46cfa6ba03 184 PANTHER PTHR34227 1 183 2.3E-84 T 22-04-2016 APT61_RS14260 5f0608877a5206cf48505d46cfa6ba03 184 PANTHER PTHR34227:SF2 1 183 2.3E-84 T 22-04-2016 APT61_RS14260 5f0608877a5206cf48505d46cfa6ba03 184 SUPERFAMILY SSF89155 2 180 1.44E-41 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APT61_RS14260 5f0608877a5206cf48505d46cfa6ba03 184 PIRSF PIRSF004690 1 184 2.6E-56 T 22-04-2016 IPR026269 Tat proofreading chaperone DmsD-type APT61_RS14260 5f0608877a5206cf48505d46cfa6ba03 184 Pfam PF02613 Nitrate reductase delta subunit 36 147 1.4E-12 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APT61_RS14260 5f0608877a5206cf48505d46cfa6ba03 184 Gene3D G3DSA:1.10.3480.10 1 182 3.5E-48 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APT61_RS18165 d8f42ea6e4cd1310bf62d5638119f99b 430 PANTHER PTHR11807 14 428 1.1E-94 T 22-04-2016 APT61_RS18165 d8f42ea6e4cd1310bf62d5638119f99b 430 Pfam PF11734 TilS substrate C-terminal domain 357 428 1.0E-25 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APT61_RS18165 d8f42ea6e4cd1310bf62d5638119f99b 430 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 15 197 5.1E-49 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APT61_RS18165 d8f42ea6e4cd1310bf62d5638119f99b 430 PANTHER PTHR11807:SF2 14 428 1.1E-94 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APT61_RS18165 d8f42ea6e4cd1310bf62d5638119f99b 430 SUPERFAMILY SSF56037 321 422 6.54E-31 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 APT61_RS18165 d8f42ea6e4cd1310bf62d5638119f99b 430 Gene3D G3DSA:3.40.50.620 14 173 1.7E-9 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS18165 d8f42ea6e4cd1310bf62d5638119f99b 430 Pfam PF09179 TilS substrate binding domain 242 309 2.8E-20 T 22-04-2016 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APT61_RS18165 d8f42ea6e4cd1310bf62d5638119f99b 430 Pfam PF01171 PP-loop family 16 192 2.9E-55 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal APT61_RS18165 d8f42ea6e4cd1310bf62d5638119f99b 430 SUPERFAMILY SSF82829 228 312 1.02E-26 T 22-04-2016 APT61_RS18165 d8f42ea6e4cd1310bf62d5638119f99b 430 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 6 301 22.985 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APT61_RS18165 d8f42ea6e4cd1310bf62d5638119f99b 430 SUPERFAMILY SSF52402 7 227 1.26E-63 T 22-04-2016 APT61_RS18165 d8f42ea6e4cd1310bf62d5638119f99b 430 SMART SM00977 357 428 2.8E-26 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APT61_RS18165 d8f42ea6e4cd1310bf62d5638119f99b 430 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 357 402 1.2E-16 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 APT61_RS18535 0e50e5e517e071095a7e23fa1bfc4151 461 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 281 295 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APT61_RS18535 0e50e5e517e071095a7e23fa1bfc4151 461 Gene3D G3DSA:3.40.50.300 192 455 4.3E-94 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18535 0e50e5e517e071095a7e23fa1bfc4151 461 PANTHER PTHR30258 57 459 1.7E-184 T 22-04-2016 APT61_RS18535 0e50e5e517e071095a7e23fa1bfc4151 461 Pfam PF00437 Type II/IV secretion system protein 87 353 4.5E-82 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APT61_RS18535 0e50e5e517e071095a7e23fa1bfc4151 461 Gene3D G3DSA:3.30.450.90 54 186 9.5E-44 T 22-04-2016 APT61_RS18535 0e50e5e517e071095a7e23fa1bfc4151 461 SUPERFAMILY SSF52540 80 452 1.41E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18535 0e50e5e517e071095a7e23fa1bfc4151 461 PANTHER PTHR30258:SF1 57 459 1.7E-184 T 22-04-2016 APT61_RS05930 c87255c96559ab704379d3607c8d2a49 128 PANTHER PTHR10093:SF3 1 128 1.8E-103 T 22-04-2016 APT61_RS05930 c87255c96559ab704379d3607c8d2a49 128 SUPERFAMILY SSF82649 1 125 6.54E-49 T 22-04-2016 APT61_RS05930 c87255c96559ab704379d3607c8d2a49 128 Pfam PF01592 NifU-like N terminal domain 2 126 1.2E-56 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 APT61_RS05930 c87255c96559ab704379d3607c8d2a49 128 PANTHER PTHR10093 1 128 1.8E-103 T 22-04-2016 APT61_RS05930 c87255c96559ab704379d3607c8d2a49 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 9.6E-71 T 22-04-2016 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 APT61_RS05930 c87255c96559ab704379d3607c8d2a49 128 Gene3D G3DSA:3.90.1010.10 2 126 9.2E-57 T 22-04-2016 APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 PANTHER PTHR11751 124 147 5.6E-44 T 22-04-2016 APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 PANTHER PTHR11751 9 77 5.6E-44 T 22-04-2016 APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 6 241 3.8E-98 T 22-04-2016 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 PANTHER PTHR11751:SF292 124 147 5.6E-44 T 22-04-2016 APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 PANTHER PTHR11751:SF292 9 77 5.6E-44 T 22-04-2016 APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 5.0E-19 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 Gene3D G3DSA:1.10.10.10 9 82 1.8E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 Pfam PF07702 UTRA domain 96 235 1.5E-26 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 3.7E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 3.7E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 SMART SM00866 96 236 1.6E-21 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 SUPERFAMILY SSF64288 63 240 1.11E-35 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 SUPERFAMILY SSF46785 12 79 5.21E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 SMART SM00345 17 75 6.2E-22 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS20660 8fcd6b7cde056817af8517cf2f2f9ac9 241 Gene3D G3DSA:3.40.1410.10 83 241 2.7E-43 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APT61_RS17630 f7ead1e0a50d192ab9c7e001393e5b52 208 Pfam PF15977 Winged helix-turn-helix DNA binding 139 205 4.9E-27 T 22-04-2016 APT61_RS17630 f7ead1e0a50d192ab9c7e001393e5b52 208 SUPERFAMILY SSF51206 38 123 2.49E-5 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like APT61_RS10365 2ce5c11955d09f341dee3558e718cc73 359 Pfam PF01593 Flavin containing amine oxidoreductase 12 77 4.5E-16 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 APT61_RS10365 2ce5c11955d09f341dee3558e718cc73 359 Pfam PF01593 Flavin containing amine oxidoreductase 103 348 9.7E-21 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 APT61_RS10365 2ce5c11955d09f341dee3558e718cc73 359 Gene3D G3DSA:3.50.50.60 116 143 8.4E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS10365 2ce5c11955d09f341dee3558e718cc73 359 Gene3D G3DSA:3.50.50.60 4 43 8.4E-11 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS10365 2ce5c11955d09f341dee3558e718cc73 359 Gene3D G3DSA:3.90.660.10 144 299 4.4E-35 T 22-04-2016 APT61_RS10365 2ce5c11955d09f341dee3558e718cc73 359 PANTHER PTHR10742 4 298 6.5E-40 T 22-04-2016 APT61_RS10365 2ce5c11955d09f341dee3558e718cc73 359 SUPERFAMILY SSF54373 198 299 2.28E-20 T 22-04-2016 APT61_RS10365 2ce5c11955d09f341dee3558e718cc73 359 SUPERFAMILY SSF51905 2 213 1.94E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS10365 2ce5c11955d09f341dee3558e718cc73 359 SUPERFAMILY SSF51905 322 348 1.94E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS16875 2fbcb37063c163dc8cc2c7041136976e 289 SMART SM00530 22 94 2.3E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS16875 2fbcb37063c163dc8cc2c7041136976e 289 PANTHER PTHR35010:SF3 4 284 2.4E-105 T 22-04-2016 APT61_RS16875 2fbcb37063c163dc8cc2c7041136976e 289 Pfam PF13560 Helix-turn-helix domain 18 97 1.3E-15 T 22-04-2016 APT61_RS16875 2fbcb37063c163dc8cc2c7041136976e 289 PANTHER PTHR35010 4 284 2.4E-105 T 22-04-2016 APT61_RS16875 2fbcb37063c163dc8cc2c7041136976e 289 Gene3D G3DSA:1.10.260.40 13 93 5.7E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS16875 2fbcb37063c163dc8cc2c7041136976e 289 SUPERFAMILY SSF47413 15 93 2.51E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS09720 67e5799ab5ed6f776b4a675ae91134cf 351 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 9 127 1.6E-30 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APT61_RS09720 67e5799ab5ed6f776b4a675ae91134cf 351 Gene3D G3DSA:3.30.360.10 144 345 6.7E-44 T 22-04-2016 APT61_RS09720 67e5799ab5ed6f776b4a675ae91134cf 351 Gene3D G3DSA:3.40.50.720 4 143 6.0E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS09720 67e5799ab5ed6f776b4a675ae91134cf 351 SUPERFAMILY SSF55347 137 282 1.96E-20 T 22-04-2016 APT61_RS09720 67e5799ab5ed6f776b4a675ae91134cf 351 SUPERFAMILY SSF51735 5 157 1.13E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS09720 67e5799ab5ed6f776b4a675ae91134cf 351 PANTHER PTHR22604 1 350 4.9E-173 T 22-04-2016 APT61_RS09720 67e5799ab5ed6f776b4a675ae91134cf 351 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 141 246 2.2E-8 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APT61_RS09720 67e5799ab5ed6f776b4a675ae91134cf 351 PANTHER PTHR22604:SF130 1 350 4.9E-173 T 22-04-2016 APT61_RS17970 e5385303274ca46bce9f1f08988f0545 198 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 3 197 5.9E-104 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APT61_RS17970 e5385303274ca46bce9f1f08988f0545 198 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 196 8.1E-58 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APT61_RS17970 e5385303274ca46bce9f1f08988f0545 198 PIRSF PIRSF006102 1 198 3.0E-63 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 APT61_RS17970 e5385303274ca46bce9f1f08988f0545 198 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 1 198 29.592 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APT61_RS17970 e5385303274ca46bce9f1f08988f0545 198 PANTHER PTHR30335 3 198 4.3E-141 T 22-04-2016 APT61_RS17970 e5385303274ca46bce9f1f08988f0545 198 PANTHER PTHR30335:SF1 3 198 4.3E-141 T 22-04-2016 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APT61_RS22015 09945a1177bdb96d35b594d6d3fedd74 142 PANTHER PTHR11527 1 142 1.0E-80 T 22-04-2016 IPR031107 Small heat shock protein HSP20 APT61_RS22015 09945a1177bdb96d35b594d6d3fedd74 142 PANTHER PTHR11527:SF127 1 142 1.0E-80 T 22-04-2016 APT61_RS22015 09945a1177bdb96d35b594d6d3fedd74 142 SUPERFAMILY SSF49764 29 134 1.95E-18 T 22-04-2016 IPR008978 HSP20-like chaperone APT61_RS22015 09945a1177bdb96d35b594d6d3fedd74 142 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 142 44.136 T 22-04-2016 IPR022848 Small heat shock protein IbpB APT61_RS22015 09945a1177bdb96d35b594d6d3fedd74 142 Pfam PF00011 Hsp20/alpha crystallin family 39 135 7.2E-20 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain APT61_RS22015 09945a1177bdb96d35b594d6d3fedd74 142 Gene3D G3DSA:2.60.40.790 21 135 3.2E-15 T 22-04-2016 IPR008978 HSP20-like chaperone APT61_RS05175 ae2b687274903577abbec4a190fe3e1c 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 73 4.1E-20 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS05175 ae2b687274903577abbec4a190fe3e1c 306 SUPERFAMILY SSF53850 100 298 1.02E-34 T 22-04-2016 APT61_RS05175 ae2b687274903577abbec4a190fe3e1c 306 Gene3D G3DSA:3.40.190.10 101 184 3.3E-26 T 22-04-2016 APT61_RS05175 ae2b687274903577abbec4a190fe3e1c 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 3.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS05175 ae2b687274903577abbec4a190fe3e1c 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 50 3.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS05175 ae2b687274903577abbec4a190fe3e1c 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 40 3.1E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS05175 ae2b687274903577abbec4a190fe3e1c 306 Gene3D G3DSA:3.40.190.10 185 265 5.6E-19 T 22-04-2016 APT61_RS05175 ae2b687274903577abbec4a190fe3e1c 306 Gene3D G3DSA:1.10.10.10 8 93 7.8E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05175 ae2b687274903577abbec4a190fe3e1c 306 SUPERFAMILY SSF46785 12 120 3.53E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS05175 ae2b687274903577abbec4a190fe3e1c 306 Pfam PF03466 LysR substrate binding domain 99 299 6.8E-32 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS05175 ae2b687274903577abbec4a190fe3e1c 306 PANTHER PTHR30537 6 301 1.4E-77 T 22-04-2016 APT61_RS02585 cc4200c8465a77801b4ca0c4464f3fbe 147 Gene3D G3DSA:3.40.50.10110 1 144 8.3E-52 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APT61_RS02585 cc4200c8465a77801b4ca0c4464f3fbe 147 SUPERFAMILY SSF102400 1 145 1.44E-47 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APT61_RS02585 cc4200c8465a77801b4ca0c4464f3fbe 147 PANTHER PTHR38767 2 146 9.7E-66 T 22-04-2016 APT61_RS02585 cc4200c8465a77801b4ca0c4464f3fbe 147 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 141 1.3E-37 T 22-04-2016 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 APT61_RS21520 82f4e2e142c521e1c339088e14d423d9 196 SUPERFAMILY SSF158668 27 188 3.14E-58 T 22-04-2016 APT61_RS21520 82f4e2e142c521e1c339088e14d423d9 196 PANTHER PTHR37941 1 195 6.2E-56 T 22-04-2016 APT61_RS21520 82f4e2e142c521e1c339088e14d423d9 196 Pfam PF05068 Mannitol repressor 30 188 9.3E-63 T 22-04-2016 IPR007761 Mannitol repressor APT61_RS21520 82f4e2e142c521e1c339088e14d423d9 196 Gene3D G3DSA:1.20.120.330 23 189 1.6E-79 T 22-04-2016 APT61_RS08215 d8421fe4f56927d9b7f23fb90f29eb93 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 4 180 1.7E-62 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APT61_RS08215 d8421fe4f56927d9b7f23fb90f29eb93 182 PIRSF PIRSF000847 1 177 2.0E-44 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APT61_RS08215 d8421fe4f56927d9b7f23fb90f29eb93 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 33.953 T 22-04-2016 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 APT61_RS08215 d8421fe4f56927d9b7f23fb90f29eb93 182 PANTHER PTHR14269:SF13 2 179 6.2E-99 T 22-04-2016 APT61_RS08215 d8421fe4f56927d9b7f23fb90f29eb93 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APT61_RS08215 d8421fe4f56927d9b7f23fb90f29eb93 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 2.6E-18 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APT61_RS08215 d8421fe4f56927d9b7f23fb90f29eb93 182 PANTHER PTHR14269 2 179 6.2E-99 T 22-04-2016 APT61_RS11725 51b18947aeab8d32b01b75be59a70a6a 108 PANTHER PTHR36116:SF1 1 102 2.3E-47 T 22-04-2016 APT61_RS11725 51b18947aeab8d32b01b75be59a70a6a 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.21 T 22-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 APT61_RS11725 51b18947aeab8d32b01b75be59a70a6a 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 1.1E-45 T 22-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 APT61_RS11725 51b18947aeab8d32b01b75be59a70a6a 108 SUPERFAMILY SSF103481 8 105 1.57E-6 T 22-04-2016 APT61_RS11725 51b18947aeab8d32b01b75be59a70a6a 108 PANTHER PTHR36116 1 102 2.3E-47 T 22-04-2016 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 PANTHER PTHR11405 3 379 1.3E-254 T 22-04-2016 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.2E-11 T 22-04-2016 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.2E-11 T 22-04-2016 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.2E-11 T 22-04-2016 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 SUPERFAMILY SSF52317 153 378 3.21E-65 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.5E-51 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 Pfam PF00117 Glutamine amidotransferase class-I 198 372 1.2E-49 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 SUPERFAMILY SSF52021 3 140 1.57E-56 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 22-04-2016 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 22-04-2016 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 22-04-2016 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 3.8E-40 T 22-04-2016 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 3.8E-40 T 22-04-2016 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 3.8E-40 T 22-04-2016 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 3.8E-40 T 22-04-2016 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 3.8E-40 T 22-04-2016 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 SMART SM01097 3 133 6.0E-90 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 Gene3D G3DSA:3.50.30.20 4 143 7.2E-62 T 22-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 Gene3D G3DSA:3.40.50.880 154 378 3.4E-85 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.679 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS18935 f5bc1a654fa84eed10e4063160f7dfde 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 2.8E-152 T 22-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 APT61_RS00700 790f106c6c880eb3da014e7084792bf0 212 PANTHER PTHR30055:SF39 1 207 5.4E-115 T 22-04-2016 APT61_RS00700 790f106c6c880eb3da014e7084792bf0 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 59 3.3E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS00700 790f106c6c880eb3da014e7084792bf0 212 SUPERFAMILY SSF46689 2 78 5.67E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS00700 790f106c6c880eb3da014e7084792bf0 212 PANTHER PTHR30055 1 207 5.4E-115 T 22-04-2016 APT61_RS00700 790f106c6c880eb3da014e7084792bf0 212 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 2 211 56.089 T 22-04-2016 IPR023764 Transcriptional repressor HTH, FabR APT61_RS00700 790f106c6c880eb3da014e7084792bf0 212 Gene3D G3DSA:1.10.357.10 3 194 2.4E-35 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS05130 ef9e9b6b090f33684dc00292c91eef06 134 PANTHER PTHR38097:SF2 2 134 4.1E-59 T 22-04-2016 APT61_RS05130 ef9e9b6b090f33684dc00292c91eef06 134 SUPERFAMILY SSF81273 3 58 4.9E-16 T 22-04-2016 APT61_RS05130 ef9e9b6b090f33684dc00292c91eef06 134 Gene3D G3DSA:1.10.287.1050 1 58 1.2E-19 T 22-04-2016 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 APT61_RS05130 ef9e9b6b090f33684dc00292c91eef06 134 SUPERFAMILY SSF81273 93 134 6.67E-10 T 22-04-2016 APT61_RS05130 ef9e9b6b090f33684dc00292c91eef06 134 PANTHER PTHR38097 2 134 4.1E-59 T 22-04-2016 APT61_RS05130 ef9e9b6b090f33684dc00292c91eef06 134 PIRSF PIRSF002096 1 134 5.0E-47 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 APT61_RS05130 ef9e9b6b090f33684dc00292c91eef06 134 Gene3D G3DSA:4.10.430.10 93 134 8.9E-22 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APT61_RS05130 ef9e9b6b090f33684dc00292c91eef06 134 Pfam PF00816 H-NS histone family 39 128 7.4E-17 T 22-04-2016 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 APT61_RS05130 ef9e9b6b090f33684dc00292c91eef06 134 SMART SM00528 87 134 6.6E-23 T 22-04-2016 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 APT61_RS15095 9125c99be2c6b14f1bbc40672a3d5415 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 5.2E-42 T 22-04-2016 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 APT61_RS15095 9125c99be2c6b14f1bbc40672a3d5415 73 Gene3D G3DSA:2.40.50.140 1 65 4.0E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS15095 9125c99be2c6b14f1bbc40672a3d5415 73 PANTHER PTHR11544 1 73 9.3E-47 T 22-04-2016 APT61_RS15095 9125c99be2c6b14f1bbc40672a3d5415 73 PIRSF PIRSF002599 1 73 3.2E-22 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APT61_RS15095 9125c99be2c6b14f1bbc40672a3d5415 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 22-04-2016 IPR019844 Cold-shock conserved site APT61_RS15095 9125c99be2c6b14f1bbc40672a3d5415 73 PRINTS PR00050 Cold shock protein signature 25 34 6.1E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS15095 9125c99be2c6b14f1bbc40672a3d5415 73 PRINTS PR00050 Cold shock protein signature 4 19 6.1E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS15095 9125c99be2c6b14f1bbc40672a3d5415 73 PRINTS PR00050 Cold shock protein signature 40 58 6.1E-15 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS15095 9125c99be2c6b14f1bbc40672a3d5415 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.2E-28 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS15095 9125c99be2c6b14f1bbc40672a3d5415 73 PANTHER PTHR11544:SF52 1 73 9.3E-47 T 22-04-2016 APT61_RS15095 9125c99be2c6b14f1bbc40672a3d5415 73 SMART SM00357 3 67 8.1E-28 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APT61_RS15095 9125c99be2c6b14f1bbc40672a3d5415 73 SUPERFAMILY SSF50249 1 66 1.03E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS17200 79d356ee2fbac6696af03f77e3406c46 357 Pfam PF13377 Periplasmic binding protein-like domain 169 328 7.0E-38 T 22-04-2016 APT61_RS17200 79d356ee2fbac6696af03f77e3406c46 357 SUPERFAMILY SSF47413 2 61 9.98E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS17200 79d356ee2fbac6696af03f77e3406c46 357 Gene3D G3DSA:3.40.50.2300 65 175 6.3E-34 T 22-04-2016 APT61_RS17200 79d356ee2fbac6696af03f77e3406c46 357 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS17200 79d356ee2fbac6696af03f77e3406c46 357 Gene3D G3DSA:3.40.50.2300 176 305 4.8E-46 T 22-04-2016 APT61_RS17200 79d356ee2fbac6696af03f77e3406c46 357 SMART SM00354 3 73 3.2E-35 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS17200 79d356ee2fbac6696af03f77e3406c46 357 SUPERFAMILY SSF53822 62 330 3.99E-58 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS17200 79d356ee2fbac6696af03f77e3406c46 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 3.7E-22 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS17200 79d356ee2fbac6696af03f77e3406c46 357 PANTHER PTHR30146:SF34 2 329 3.2E-132 T 22-04-2016 APT61_RS17200 79d356ee2fbac6696af03f77e3406c46 357 PANTHER PTHR30146 2 329 3.2E-132 T 22-04-2016 APT61_RS17200 79d356ee2fbac6696af03f77e3406c46 357 Gene3D G3DSA:1.10.260.40 4 64 1.8E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS17200 79d356ee2fbac6696af03f77e3406c46 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 5.8E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS17200 79d356ee2fbac6696af03f77e3406c46 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 5.8E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS04165 96569ca6220abe71fed619d518afeddd 103 PANTHER PTHR38088 2 103 1.7E-67 T 22-04-2016 APT61_RS04165 96569ca6220abe71fed619d518afeddd 103 Gene3D G3DSA:2.30.130.30 1 103 1.7E-49 T 22-04-2016 APT61_RS04165 96569ca6220abe71fed619d518afeddd 103 PANTHER PTHR38088:SF2 2 103 1.7E-67 T 22-04-2016 APT61_RS04165 96569ca6220abe71fed619d518afeddd 103 Pfam PF04266 ASCH domain 6 94 2.6E-15 T 22-04-2016 IPR007374 ASCH domain APT61_RS04165 96569ca6220abe71fed619d518afeddd 103 SUPERFAMILY SSF88697 1 103 1.62E-33 T 22-04-2016 IPR015947 PUA-like domain APT61_RS04165 96569ca6220abe71fed619d518afeddd 103 PIRSF PIRSF029143 1 103 5.9E-51 T 22-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 APT61_RS04165 96569ca6220abe71fed619d518afeddd 103 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 2 103 31.46 T 22-04-2016 IPR008314 Uncharacterised conserved protein UCP029143 APT61_RS04165 96569ca6220abe71fed619d518afeddd 103 SMART SM01022 6 102 2.1E-26 T 22-04-2016 IPR007374 ASCH domain APT61_RS13480 90470d7dec3dc88639e85c87c8ef3f7d 342 SMART SM00065 18 164 4.5E-9 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS13480 90470d7dec3dc88639e85c87c8ef3f7d 342 Pfam PF13185 GAF domain 17 155 8.5E-12 T 22-04-2016 IPR003018 GAF domain GO:0005515 APT61_RS13480 90470d7dec3dc88639e85c87c8ef3f7d 342 Gene3D G3DSA:3.30.70.270 175 332 4.4E-40 T 22-04-2016 APT61_RS13480 90470d7dec3dc88639e85c87c8ef3f7d 342 Pfam PF00990 Diguanylate cyclase, GGDEF domain 175 332 2.4E-34 T 22-04-2016 IPR000160 GGDEF domain APT61_RS13480 90470d7dec3dc88639e85c87c8ef3f7d 342 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 173 333 8.5E-33 T 22-04-2016 IPR000160 GGDEF domain APT61_RS13480 90470d7dec3dc88639e85c87c8ef3f7d 342 SUPERFAMILY SSF55781 18 167 7.63E-17 T 22-04-2016 IPR029016 GAF domain-like APT61_RS13480 90470d7dec3dc88639e85c87c8ef3f7d 342 PANTHER PTHR10799:SF710 1 159 3.0E-14 T 22-04-2016 APT61_RS13480 90470d7dec3dc88639e85c87c8ef3f7d 342 PANTHER PTHR10799:SF710 207 331 3.0E-14 T 22-04-2016 APT61_RS13480 90470d7dec3dc88639e85c87c8ef3f7d 342 SUPERFAMILY SSF55073 179 332 2.59E-35 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS13480 90470d7dec3dc88639e85c87c8ef3f7d 342 PANTHER PTHR10799 1 159 3.0E-14 T 22-04-2016 APT61_RS13480 90470d7dec3dc88639e85c87c8ef3f7d 342 PANTHER PTHR10799 207 331 3.0E-14 T 22-04-2016 APT61_RS13480 90470d7dec3dc88639e85c87c8ef3f7d 342 Gene3D G3DSA:3.30.450.40 6 169 6.3E-17 T 22-04-2016 IPR029016 GAF domain-like APT61_RS13480 90470d7dec3dc88639e85c87c8ef3f7d 342 SMART SM00267 163 340 2.1E-34 T 22-04-2016 IPR000160 GGDEF domain APT61_RS10940 3a1a8e61e189ba87b32afe25ba299971 292 Gene3D G3DSA:3.60.15.10 8 267 3.9E-52 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS10940 3a1a8e61e189ba87b32afe25ba299971 292 PANTHER PTHR23200 8 292 1.2E-59 T 22-04-2016 APT61_RS10940 3a1a8e61e189ba87b32afe25ba299971 292 SMART SM00849 61 264 1.1E-25 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS10940 3a1a8e61e189ba87b32afe25ba299971 292 SUPERFAMILY SSF56281 6 268 7.47E-45 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS10940 3a1a8e61e189ba87b32afe25ba299971 292 Pfam PF00753 Metallo-beta-lactamase superfamily 60 264 4.7E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS10940 3a1a8e61e189ba87b32afe25ba299971 292 PANTHER PTHR23200:SF46 8 292 1.2E-59 T 22-04-2016 APT61_RS02480 985b41414ae11c9f97d79b2c8eb5c757 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 3.1E-138 T 22-04-2016 IPR010097 Malate dehydrogenase, type 1 GO:0006108|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 APT61_RS02480 985b41414ae11c9f97d79b2c8eb5c757 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 22-04-2016 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: REACT_474 APT61_RS02480 985b41414ae11c9f97d79b2c8eb5c757 312 Gene3D G3DSA:3.90.110.10 147 311 2.7E-62 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APT61_RS02480 985b41414ae11c9f97d79b2c8eb5c757 312 PANTHER PTHR11540:SF22 1 312 3.7E-234 T 22-04-2016 APT61_RS02480 985b41414ae11c9f97d79b2c8eb5c757 312 Gene3D G3DSA:3.40.50.720 1 146 5.0E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02480 985b41414ae11c9f97d79b2c8eb5c757 312 PANTHER PTHR11540 1 312 3.7E-234 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APT61_RS02480 985b41414ae11c9f97d79b2c8eb5c757 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 60.196 T 22-04-2016 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 APT61_RS02480 985b41414ae11c9f97d79b2c8eb5c757 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 4.2E-51 T 22-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 APT61_RS02480 985b41414ae11c9f97d79b2c8eb5c757 312 SUPERFAMILY SSF56327 146 311 1.14E-40 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APT61_RS02480 985b41414ae11c9f97d79b2c8eb5c757 312 SUPERFAMILY SSF51735 1 145 1.0E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02480 985b41414ae11c9f97d79b2c8eb5c757 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 1.6E-45 T 22-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 APT61_RS02480 985b41414ae11c9f97d79b2c8eb5c757 312 PIRSF PIRSF000102 1 308 2.0E-58 T 22-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 APT61_RS02995 9c9a02bc6fba623cc6add01552204633 434 PANTHER PTHR30501:SF2 1 434 1.1E-131 T 22-04-2016 APT61_RS02995 9c9a02bc6fba623cc6add01552204633 434 Pfam PF03313 Serine dehydratase alpha chain 195 426 1.6E-46 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit APT61_RS02995 9c9a02bc6fba623cc6add01552204633 434 PIRSF PIRSF006054 4 433 1.0E-168 T 22-04-2016 IPR021144 Uncharacterised protein family UPF0597 APT61_RS02995 9c9a02bc6fba623cc6add01552204633 434 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 8 431 34.269 T 22-04-2016 IPR021144 Uncharacterised protein family UPF0597 APT61_RS02995 9c9a02bc6fba623cc6add01552204633 434 PANTHER PTHR30501 1 434 1.1E-131 T 22-04-2016 APT61_RS19500 81844042ecca0021b8fe5454b26b394b 317 PANTHER PTHR13748:SF43 1 312 6.2E-129 T 22-04-2016 APT61_RS19500 81844042ecca0021b8fe5454b26b394b 317 SUPERFAMILY SSF90002 223 314 2.48E-24 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APT61_RS19500 81844042ecca0021b8fe5454b26b394b 317 SUPERFAMILY SSF52540 3 202 2.22E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19500 81844042ecca0021b8fe5454b26b394b 317 SMART SM00833 223 316 1.3E-10 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APT61_RS19500 81844042ecca0021b8fe5454b26b394b 317 Gene3D G3DSA:3.30.1220.10 205 313 5.1E-30 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APT61_RS19500 81844042ecca0021b8fe5454b26b394b 317 Gene3D G3DSA:3.40.50.300 3 201 4.0E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19500 81844042ecca0021b8fe5454b26b394b 317 PANTHER PTHR13748 1 312 6.2E-129 T 22-04-2016 APT61_RS19500 81844042ecca0021b8fe5454b26b394b 317 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 223 314 2.4E-17 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal APT61_RS19500 81844042ecca0021b8fe5454b26b394b 317 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 182 1.2E-50 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 Gene3D G3DSA:1.10.40.30 416 460 4.9E-33 T 22-04-2016 APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 Pfam PF10415 Fumarase C C-terminus 407 460 6.6E-26 T 22-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 Pfam PF00206 Lyase 11 341 2.1E-124 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 Gene3D G3DSA:1.20.200.10 138 415 2.0E-107 T 22-04-2016 APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 PRINTS PR00145 Argininosuccinate lyase family signature 316 332 2.5E-5 T 22-04-2016 APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 2.5E-5 T 22-04-2016 APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 PANTHER PTHR11444 4 460 9.5E-254 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 Gene3D G3DSA:1.10.275.10 2 137 4.8E-59 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 PANTHER PTHR11444:SF1 4 460 9.5E-254 T 22-04-2016 APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 3.8E-34 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 3.8E-34 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 3.8E-34 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 3.8E-34 T 22-04-2016 IPR000362 Fumarate lyase family APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 92.17 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 460 3.3E-251 T 22-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 APT61_RS12185 14b54e98bdaf19f0a130c5476f1b5d1f 463 SUPERFAMILY SSF48557 4 458 6.75E-159 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 APT61_RS13005 9f601df44c4f2d677718741d5c8ac287 326 PANTHER PTHR30472:SF29 6 326 3.6E-181 T 22-04-2016 APT61_RS13005 9f601df44c4f2d677718741d5c8ac287 326 Gene3D G3DSA:1.10.3470.10 6 324 1.5E-99 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS13005 9f601df44c4f2d677718741d5c8ac287 326 PANTHER PTHR30472 6 326 3.6E-181 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS13005 9f601df44c4f2d677718741d5c8ac287 326 Pfam PF01032 FecCD transport family 23 323 9.0E-83 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS13005 9f601df44c4f2d677718741d5c8ac287 326 SUPERFAMILY SSF81345 5 323 1.57E-82 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS18965 d4d3956bbd5c2807e65d24c48951251b 166 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APT61_RS18965 d4d3956bbd5c2807e65d24c48951251b 166 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 16.602 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APT61_RS18965 d4d3956bbd5c2807e65d24c48951251b 166 Pfam PF01252 Signal peptidase (SPase) II 16 155 9.0E-35 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APT61_RS18965 d4d3956bbd5c2807e65d24c48951251b 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.3E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APT61_RS18965 d4d3956bbd5c2807e65d24c48951251b 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.3E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APT61_RS18965 d4d3956bbd5c2807e65d24c48951251b 166 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.3E-19 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APT61_RS18965 d4d3956bbd5c2807e65d24c48951251b 166 PANTHER PTHR33695 9 166 4.2E-57 T 22-04-2016 APT61_RS18965 d4d3956bbd5c2807e65d24c48951251b 166 PANTHER PTHR33695:SF1 9 166 4.2E-57 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APT61_RS18965 d4d3956bbd5c2807e65d24c48951251b 166 TIGRFAM TIGR00077 lspA: signal peptidase II 1 164 1.9E-58 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 APT61_RS15520 7e9e8031dcde1ca5e197899b60a11439 225 PANTHER PTHR11019:SF97 1 63 3.2E-71 T 22-04-2016 APT61_RS15520 7e9e8031dcde1ca5e197899b60a11439 225 PANTHER PTHR11019:SF97 84 223 3.2E-71 T 22-04-2016 APT61_RS15520 7e9e8031dcde1ca5e197899b60a11439 225 PANTHER PTHR11019 1 63 3.2E-71 T 22-04-2016 APT61_RS15520 7e9e8031dcde1ca5e197899b60a11439 225 PANTHER PTHR11019 84 223 3.2E-71 T 22-04-2016 APT61_RS15520 7e9e8031dcde1ca5e197899b60a11439 225 Pfam PF01965 DJ-1/PfpI family 25 222 3.6E-14 T 22-04-2016 IPR002818 DJ-1/PfpI APT61_RS15520 7e9e8031dcde1ca5e197899b60a11439 225 Gene3D G3DSA:3.40.50.880 1 224 1.8E-90 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS15520 7e9e8031dcde1ca5e197899b60a11439 225 SUPERFAMILY SSF52317 1 224 3.44E-75 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS04625 ce7075c8e9c0822b17418157abe81d39 263 SUPERFAMILY SSF101386 2 106 2.78E-26 T 22-04-2016 APT61_RS04625 ce7075c8e9c0822b17418157abe81d39 263 TIGRFAM TIGR00444 mazG: MazG family protein 10 257 8.2E-120 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG APT61_RS04625 ce7075c8e9c0822b17418157abe81d39 263 Gene3D G3DSA:1.10.287.1080 132 219 8.0E-13 T 22-04-2016 APT61_RS04625 ce7075c8e9c0822b17418157abe81d39 263 Gene3D G3DSA:1.10.287.1080 19 73 8.7E-7 T 22-04-2016 APT61_RS04625 ce7075c8e9c0822b17418157abe81d39 263 PANTHER PTHR30522:SF0 1 263 2.2E-135 T 22-04-2016 IPR011551 NTP pyrophosphohydrolase MazG APT61_RS04625 ce7075c8e9c0822b17418157abe81d39 263 PANTHER PTHR30522 1 263 2.2E-135 T 22-04-2016 APT61_RS04625 ce7075c8e9c0822b17418157abe81d39 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 2.0E-27 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core APT61_RS04625 ce7075c8e9c0822b17418157abe81d39 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 167 227 2.9E-8 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core APT61_RS04625 ce7075c8e9c0822b17418157abe81d39 263 SUPERFAMILY SSF101386 135 235 1.16E-23 T 22-04-2016 APT61_RS20075 88e9e780cfade4e038502cf139bbb375 527 SMART SM00304 221 273 3.0E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS20075 88e9e780cfade4e038502cf139bbb375 527 Pfam PF00672 HAMP domain 202 267 8.6E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS20075 88e9e780cfade4e038502cf139bbb375 527 PANTHER PTHR32089:SF63 195 524 4.0E-128 T 22-04-2016 APT61_RS20075 88e9e780cfade4e038502cf139bbb375 527 PANTHER PTHR32089:SF63 67 157 4.0E-128 T 22-04-2016 APT61_RS20075 88e9e780cfade4e038502cf139bbb375 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 1.2E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20075 88e9e780cfade4e038502cf139bbb375 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 295 324 1.2E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20075 88e9e780cfade4e038502cf139bbb375 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 449 478 1.2E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20075 88e9e780cfade4e038502cf139bbb375 527 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 1.2E-49 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS20075 88e9e780cfade4e038502cf139bbb375 527 SMART SM00283 274 521 2.1E-78 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS20075 88e9e780cfade4e038502cf139bbb375 527 SUPERFAMILY SSF58104 241 522 1.16E-66 T 22-04-2016 APT61_RS20075 88e9e780cfade4e038502cf139bbb375 527 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 332 520 1.5E-53 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS20075 88e9e780cfade4e038502cf139bbb375 527 Gene3D G3DSA:1.10.287.950 288 493 1.6E-54 T 22-04-2016 APT61_RS20075 88e9e780cfade4e038502cf139bbb375 527 PANTHER PTHR32089 195 524 4.0E-128 T 22-04-2016 APT61_RS20075 88e9e780cfade4e038502cf139bbb375 527 PANTHER PTHR32089 67 157 4.0E-128 T 22-04-2016 APT61_RS07710 4a6baa17473c22763a12a56d75387321 197 Hamap MF_00941 GDP-mannose mannosyl hydrolase [gmm]. 1 159 55.464 T 22-04-2016 IPR028613 GDP-mannose mannosyl hydrolase Gmm GO:0000287|GO:0008727 APT61_RS07710 4a6baa17473c22763a12a56d75387321 197 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APT61_RS07710 4a6baa17473c22763a12a56d75387321 197 Pfam PF00293 NUDIX domain 19 142 1.2E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APT61_RS07710 4a6baa17473c22763a12a56d75387321 197 SUPERFAMILY SSF55811 2 149 2.3E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS07710 4a6baa17473c22763a12a56d75387321 197 PANTHER PTHR22769 1 152 4.3E-95 T 22-04-2016 APT61_RS07710 4a6baa17473c22763a12a56d75387321 197 Gene3D G3DSA:3.90.79.10 7 147 1.3E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS07710 4a6baa17473c22763a12a56d75387321 197 PANTHER PTHR22769:SF31 1 152 4.3E-95 T 22-04-2016 APT61_RS08430 080f18969ac642feeb1d3ee792a26fcf 189 SMART SM00972 127 186 2.7E-9 T 22-04-2016 IPR007893 Spore coat protein U APT61_RS08430 080f18969ac642feeb1d3ee792a26fcf 189 Pfam PF05229 Spore Coat Protein U domain 27 185 1.1E-21 T 22-04-2016 IPR007893 Spore coat protein U APT61_RS08430 080f18969ac642feeb1d3ee792a26fcf 189 PANTHER PTHR37089 5 189 2.5E-18 T 22-04-2016 APT61_RS11115 181c3fe489e8838d832ec7c24a5e0d9d 391 SUPERFAMILY SSF103473 3 383 3.92E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11115 181c3fe489e8838d832ec7c24a5e0d9d 391 Pfam PF07690 Major Facilitator Superfamily 8 327 2.2E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS11115 181c3fe489e8838d832ec7c24a5e0d9d 391 PANTHER PTHR23501:SF16 1 382 9.6E-127 T 22-04-2016 APT61_RS11115 181c3fe489e8838d832ec7c24a5e0d9d 391 PANTHER PTHR23501 1 382 9.6E-127 T 22-04-2016 APT61_RS11115 181c3fe489e8838d832ec7c24a5e0d9d 391 Gene3D G3DSA:1.20.1250.20 197 375 3.3E-12 T 22-04-2016 APT61_RS11115 181c3fe489e8838d832ec7c24a5e0d9d 391 Gene3D G3DSA:1.20.1250.20 2 187 3.0E-24 T 22-04-2016 APT61_RS04920 913139018a46958b6123f6a503a51620 515 Gene3D G3DSA:1.20.1250.20 18 201 1.2E-31 T 22-04-2016 APT61_RS04920 913139018a46958b6123f6a503a51620 515 Gene3D G3DSA:1.20.1250.20 269 504 2.2E-21 T 22-04-2016 APT61_RS04920 913139018a46958b6123f6a503a51620 515 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 501 5.3E-213 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APT61_RS04920 913139018a46958b6123f6a503a51620 515 PANTHER PTHR23501:SF52 4 507 0.0 T 22-04-2016 APT61_RS04920 913139018a46958b6123f6a503a51620 515 PANTHER PTHR23501 4 507 0.0 T 22-04-2016 APT61_RS04920 913139018a46958b6123f6a503a51620 515 Pfam PF07690 Major Facilitator Superfamily 22 416 7.0E-53 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS04920 913139018a46958b6123f6a503a51620 515 SUPERFAMILY SSF103473 254 426 2.88E-71 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS04920 913139018a46958b6123f6a503a51620 515 SUPERFAMILY SSF103473 478 503 2.88E-71 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS04920 913139018a46958b6123f6a503a51620 515 SUPERFAMILY SSF103473 7 199 2.88E-71 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS19430 faf9f68640b78e15b3086b0d14ad692c 670 PANTHER PTHR22916 545 608 5.5E-36 T 22-04-2016 APT61_RS19430 faf9f68640b78e15b3086b0d14ad692c 670 PANTHER PTHR22916 386 528 5.5E-36 T 22-04-2016 APT61_RS19430 faf9f68640b78e15b3086b0d14ad692c 670 Pfam PF00535 Glycosyl transferase family 2 390 511 1.2E-21 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APT61_RS19430 faf9f68640b78e15b3086b0d14ad692c 670 Gene3D G3DSA:3.90.550.10 387 648 3.4E-52 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS19430 faf9f68640b78e15b3086b0d14ad692c 670 SUPERFAMILY SSF53448 378 638 2.81E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS00125 4cc43fba040917f2ff67def7b3b9a7b2 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 188 2.0E-69 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 APT61_RS00125 4cc43fba040917f2ff67def7b3b9a7b2 194 SUPERFAMILY SSF53448 7 188 2.7E-34 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS00125 4cc43fba040917f2ff67def7b3b9a7b2 194 PANTHER PTHR19136:SF81 5 194 4.4E-52 T 22-04-2016 APT61_RS00125 4cc43fba040917f2ff67def7b3b9a7b2 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 28.967 T 22-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 APT61_RS00125 4cc43fba040917f2ff67def7b3b9a7b2 194 Pfam PF12804 MobA-like NTP transferase domain 9 158 5.4E-34 T 22-04-2016 IPR025877 MobA-like NTP transferase APT61_RS00125 4cc43fba040917f2ff67def7b3b9a7b2 194 Gene3D G3DSA:3.90.550.10 5 192 4.9E-56 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS00125 4cc43fba040917f2ff67def7b3b9a7b2 194 PANTHER PTHR19136 5 194 4.4E-52 T 22-04-2016 APT61_RS08630 5d5205cdf646a2e17fb2d74186bdbfae 213 SUPERFAMILY SSF51569 4 209 2.56E-69 T 22-04-2016 APT61_RS08630 5d5205cdf646a2e17fb2d74186bdbfae 213 Gene3D G3DSA:3.20.20.70 3 212 3.1E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS08630 5d5205cdf646a2e17fb2d74186bdbfae 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 22-04-2016 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562|UniPathway: UPA00227|UniPathway: UPA00856 APT61_RS08630 5d5205cdf646a2e17fb2d74186bdbfae 213 Pfam PF01081 KDPG and KHG aldolase 9 203 2.1E-92 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APT61_RS08630 5d5205cdf646a2e17fb2d74186bdbfae 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 22-04-2016 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APT61_RS08630 5d5205cdf646a2e17fb2d74186bdbfae 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 1.3E-87 T 22-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 APT61_RS08630 5d5205cdf646a2e17fb2d74186bdbfae 213 PANTHER PTHR30246 1 213 3.8E-134 T 22-04-2016 APT61_RS08630 5d5205cdf646a2e17fb2d74186bdbfae 213 PANTHER PTHR30246:SF0 1 213 3.8E-134 T 22-04-2016 APT61_RS17030 f7094e25e3004110d69f490cb888c270 207 PANTHER PTHR30383 25 199 6.1E-48 T 22-04-2016 APT61_RS17030 f7094e25e3004110d69f490cb888c270 207 SUPERFAMILY SSF52266 28 202 6.2E-51 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain APT61_RS17030 f7094e25e3004110d69f490cb888c270 207 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 32 186 4.7E-25 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain APT61_RS17030 f7094e25e3004110d69f490cb888c270 207 Gene3D G3DSA:3.40.50.1110 28 204 7.1E-55 T 22-04-2016 IPR013830 SGNH hydrolase-type esterase domain APT61_RS17030 f7094e25e3004110d69f490cb888c270 207 PANTHER PTHR30383:SF5 25 199 6.1E-48 T 22-04-2016 APT61_RS17030 f7094e25e3004110d69f490cb888c270 207 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 29 39 - T 22-04-2016 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 APT61_RS20515 a685fb9b0d4e9317774c0e006c634ae4 107 Gene3D G3DSA:3.30.70.830 4 106 1.3E-38 T 22-04-2016 APT61_RS20515 a685fb9b0d4e9317774c0e006c634ae4 107 PANTHER PTHR23419 3 107 1.8E-44 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 APT61_RS20515 a685fb9b0d4e9317774c0e006c634ae4 107 SUPERFAMILY SSF54913 4 106 1.15E-34 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta APT61_RS20515 a685fb9b0d4e9317774c0e006c634ae4 107 Pfam PF03091 CutA1 divalent ion tolerance protein 7 104 9.2E-33 T 22-04-2016 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 APT61_RS18885 7a0784a38e0f67b7efc48f6ffb8a81bc 273 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 APT61_RS18885 7a0784a38e0f67b7efc48f6ffb8a81bc 273 PANTHER PTHR11727 1 267 2.0E-98 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APT61_RS18885 7a0784a38e0f67b7efc48f6ffb8a81bc 273 SUPERFAMILY SSF53335 17 266 1.07E-76 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS18885 7a0784a38e0f67b7efc48f6ffb8a81bc 273 Gene3D G3DSA:1.10.8.100 201 266 7.1E-25 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like APT61_RS18885 7a0784a38e0f67b7efc48f6ffb8a81bc 273 Gene3D G3DSA:3.40.50.150 6 198 1.4E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS18885 7a0784a38e0f67b7efc48f6ffb8a81bc 273 SMART SM00650 25 198 1.4E-83 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 APT61_RS18885 7a0784a38e0f67b7efc48f6ffb8a81bc 273 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 263 2.5E-90 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APT61_RS18885 7a0784a38e0f67b7efc48f6ffb8a81bc 273 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 55.07 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 APT61_RS18885 7a0784a38e0f67b7efc48f6ffb8a81bc 273 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 265 6.0E-86 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm APT61_RS17470 4699f5e66a99ff63c012def1d241498b 110 Pfam PF02699 Preprotein translocase subunit 22 99 2.0E-26 T 22-04-2016 IPR003849 Preprotein translocase YajC APT61_RS17470 4699f5e66a99ff63c012def1d241498b 110 SMART SM01323 19 102 3.0E-38 T 22-04-2016 IPR003849 Preprotein translocase YajC APT61_RS17470 4699f5e66a99ff63c012def1d241498b 110 PANTHER PTHR33909 1 108 3.9E-37 T 22-04-2016 APT61_RS17470 4699f5e66a99ff63c012def1d241498b 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 102 4.5E-35 T 22-04-2016 IPR003849 Preprotein translocase YajC APT61_RS17470 4699f5e66a99ff63c012def1d241498b 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 6.7E-17 T 22-04-2016 IPR003849 Preprotein translocase YajC APT61_RS17470 4699f5e66a99ff63c012def1d241498b 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 6.7E-17 T 22-04-2016 IPR003849 Preprotein translocase YajC APT61_RS17470 4699f5e66a99ff63c012def1d241498b 110 PANTHER PTHR33909:SF1 1 108 3.9E-37 T 22-04-2016 APT61_RS13455 da171ba27a7ea654417c5af786341c0d 262 PANTHER PTHR11019:SF66 7 262 7.1E-141 T 22-04-2016 APT61_RS13455 da171ba27a7ea654417c5af786341c0d 262 SUPERFAMILY SSF46689 211 256 4.35E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS13455 da171ba27a7ea654417c5af786341c0d 262 Gene3D G3DSA:1.10.10.60 220 253 1.3E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS13455 da171ba27a7ea654417c5af786341c0d 262 Gene3D G3DSA:1.10.10.60 153 210 2.9E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS13455 da171ba27a7ea654417c5af786341c0d 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 238 254 3.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS13455 da171ba27a7ea654417c5af786341c0d 262 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 223 238 3.6E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS13455 da171ba27a7ea654417c5af786341c0d 262 SUPERFAMILY SSF51182 16 181 2.05E-13 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS13455 da171ba27a7ea654417c5af786341c0d 262 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 209 250 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS13455 da171ba27a7ea654417c5af786341c0d 262 PANTHER PTHR11019 7 262 7.1E-141 T 22-04-2016 APT61_RS13455 da171ba27a7ea654417c5af786341c0d 262 Pfam PF12833 Helix-turn-helix domain 178 254 2.0E-18 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS13455 da171ba27a7ea654417c5af786341c0d 262 SMART SM00342 172 254 1.9E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS13455 da171ba27a7ea654417c5af786341c0d 262 Gene3D G3DSA:2.60.120.10 17 92 1.4E-9 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS01705 151503942918ab77d0a424d819ad34f2 89 PANTHER PTHR34156 2 87 8.5E-25 T 22-04-2016 APT61_RS01705 151503942918ab77d0a424d819ad34f2 89 SUPERFAMILY SSF159871 3 89 1.22E-23 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS01705 151503942918ab77d0a424d819ad34f2 89 Pfam PF07338 Protein of unknown function (DUF1471) 36 89 4.1E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS01705 151503942918ab77d0a424d819ad34f2 89 Gene3D G3DSA:3.30.1660.10 18 89 3.5E-24 T 22-04-2016 IPR025543 Dodecin-like APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 PANTHER PTHR23522 3 418 8.6E-55 T 22-04-2016 APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 SUPERFAMILY SSF103473 15 400 1.96E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 Pfam PF01306 LacY proton/sugar symporter 8 404 1.2E-108 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 PANTHER PTHR23522:SF3 3 418 8.6E-55 T 22-04-2016 APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 PRINTS PR00174 LacY proton/sugar symporter family signature 71 100 4.5E-63 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 PRINTS PR00174 LacY proton/sugar symporter family signature 106 128 4.5E-63 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 PRINTS PR00174 LacY proton/sugar symporter family signature 260 281 4.5E-63 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 PRINTS PR00174 LacY proton/sugar symporter family signature 284 310 4.5E-63 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 PRINTS PR00174 LacY proton/sugar symporter family signature 315 334 4.5E-63 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 PRINTS PR00174 LacY proton/sugar symporter family signature 346 366 4.5E-63 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 PRINTS PR00174 LacY proton/sugar symporter family signature 214 242 4.5E-63 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 PRINTS PR00174 LacY proton/sugar symporter family signature 148 166 4.5E-63 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 Gene3D G3DSA:1.20.1250.20 13 206 2.2E-24 T 22-04-2016 APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 Gene3D G3DSA:1.20.1250.20 209 402 1.0E-35 T 22-04-2016 APT61_RS03640 81682def266b352d7100e6bd10385cdd 419 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 10 401 1.6E-109 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS01735 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:1.10.10.10 132 235 1.3E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01735 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00448 5 116 8.6E-45 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS01735 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF52172 3 126 8.4E-42 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS01735 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 1.7E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS01735 d8521a76d5088ea0467c0daab9e28465 239 PANTHER PTHR26402 5 235 1.0E-115 T 22-04-2016 APT61_RS01735 d8521a76d5088ea0467c0daab9e28465 239 PANTHER PTHR26402:SF292 5 235 1.0E-115 T 22-04-2016 APT61_RS01735 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:3.40.50.2300 4 127 1.4E-42 T 22-04-2016 APT61_RS01735 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF46894 132 234 2.07E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS01735 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00862 156 232 1.7E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS01735 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS15555 b368530c5923fbc71b147764e4d6b4b5 312 PANTHER PTHR10188:SF24 6 298 1.7E-140 T 22-04-2016 APT61_RS15555 b368530c5923fbc71b147764e4d6b4b5 312 PANTHER PTHR10188 6 298 1.7E-140 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 APT61_RS15555 b368530c5923fbc71b147764e4d6b4b5 312 SUPERFAMILY SSF56235 5 306 5.05E-102 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal APT61_RS15555 b368530c5923fbc71b147764e4d6b4b5 312 Pfam PF01112 Asparaginase 5 310 3.3E-123 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 APT61_RS05020 d5783b353add0ba705badb928db5ffdd 136 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 4 133 1.2E-53 T 22-04-2016 IPR010005 Formate hydrogenlyase maturation HycH APT61_RS05020 d5783b353add0ba705badb928db5ffdd 136 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 1 133 2.0E-56 T 22-04-2016 IPR010005 Formate hydrogenlyase maturation HycH APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 8.9E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 8.9E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 8.9E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 8.9E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 8.9E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 8.9E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 8.9E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 8.9E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 8.9E-77 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 Gene3D G3DSA:3.50.50.60 236 316 3.8E-10 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 314 1.4E-124 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PANTHER PTHR22912 1 315 1.2E-165 T 22-04-2016 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 Gene3D G3DSA:3.50.50.60 120 235 3.8E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.9E-41 T 22-04-2016 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 4.9E-41 T 22-04-2016 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 4.9E-41 T 22-04-2016 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.9E-41 T 22-04-2016 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 4.9E-41 T 22-04-2016 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 Gene3D G3DSA:3.50.50.60 4 119 3.1E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 SUPERFAMILY SSF51905 3 315 7.9E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 PANTHER PTHR22912:SF48 1 315 1.2E-165 T 22-04-2016 APT61_RS15055 3a35a858158ec21e78aae65c1ca330a0 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 3.0E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 276 295 2.5E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 216 2.5E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 373 381 2.5E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 314 325 2.5E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 242 251 2.5E-7 T 22-04-2016 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 Pfam PF00175 Oxidoreductase NAD-binding domain 277 386 4.6E-18 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 Gene3D G3DSA:3.40.50.80 269 406 4.0E-43 T 22-04-2016 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 Pfam PF00970 Oxidoreductase FAD-binding domain 205 266 4.7E-9 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 43 114 2.4E-10 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 SUPERFAMILY SSF52343 255 402 1.44E-38 T 22-04-2016 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 1 407 64.164 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 PIRSF PIRSF000044 1 407 3.1E-220 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 3 407 2.8E-230 T 22-04-2016 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 PANTHER PTHR19370:SF32 61 176 5.8E-146 T 22-04-2016 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 PANTHER PTHR19370:SF32 205 407 5.8E-146 T 22-04-2016 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 SUPERFAMILY SSF63380 105 272 2.76E-36 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 Gene3D G3DSA:2.40.30.10 124 264 1.1E-60 T 22-04-2016 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 Gene3D G3DSA:3.10.20.30 34 123 2.3E-23 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 SUPERFAMILY SSF54292 36 124 2.0E-23 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 PANTHER PTHR19370 61 176 5.8E-146 T 22-04-2016 APT61_RS17965 e96ea9074d10db076b9d0d753dc96b34 407 PANTHER PTHR19370 205 407 5.8E-146 T 22-04-2016 APT61_RS00045 36092a04ee5c7648f0a3c68151cd5f3e 498 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 4.7E-25 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 APT61_RS00045 36092a04ee5c7648f0a3c68151cd5f3e 498 SUPERFAMILY SSF52540 14 263 1.0E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00045 36092a04ee5c7648f0a3c68151cd5f3e 498 PANTHER PTHR32204 7 497 3.7E-139 T 22-04-2016 APT61_RS00045 36092a04ee5c7648f0a3c68151cd5f3e 498 SMART SM00382 38 187 4.7E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS00045 36092a04ee5c7648f0a3c68151cd5f3e 498 Pfam PF12592 Protein of unknown function (DUF3763) 443 497 2.2E-19 T 22-04-2016 IPR022547 ATPase, RavA, C-terminal GO:0016820 APT61_RS00045 36092a04ee5c7648f0a3c68151cd5f3e 498 Gene3D G3DSA:3.40.50.300 25 183 5.1E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01095 3d68e8a2f26f23d024f18f0203bb6745 253 ProSitePatterns PS01218 TatC family signature. 154 173 - T 22-04-2016 IPR019820 Sec-independent periplasmic protein translocase, conserved site APT61_RS01095 3d68e8a2f26f23d024f18f0203bb6745 253 PANTHER PTHR30371:SF0 4 253 4.2E-116 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APT61_RS01095 3d68e8a2f26f23d024f18f0203bb6745 253 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 8.4E-66 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APT61_RS01095 3d68e8a2f26f23d024f18f0203bb6745 253 PANTHER PTHR30371 4 253 4.2E-116 T 22-04-2016 APT61_RS01095 3d68e8a2f26f23d024f18f0203bb6745 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 5.0E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APT61_RS01095 3d68e8a2f26f23d024f18f0203bb6745 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 5.0E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APT61_RS01095 3d68e8a2f26f23d024f18f0203bb6745 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 5.0E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APT61_RS01095 3d68e8a2f26f23d024f18f0203bb6745 253 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 5.0E-50 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APT61_RS01095 3d68e8a2f26f23d024f18f0203bb6745 253 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 242 18.106 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APT61_RS01095 3d68e8a2f26f23d024f18f0203bb6745 253 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 8.5E-78 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 APT61_RS09375 33683a6a47d617c3dc278a4de4da6f81 302 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 275 7.7E-115 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 APT61_RS09375 33683a6a47d617c3dc278a4de4da6f81 302 PANTHER PTHR22572 10 296 4.4E-146 T 22-04-2016 APT61_RS09375 33683a6a47d617c3dc278a4de4da6f81 302 Pfam PF00483 Nucleotidyl transferase 10 276 1.0E-25 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APT61_RS09375 33683a6a47d617c3dc278a4de4da6f81 302 Gene3D G3DSA:3.90.550.10 8 280 1.2E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS09375 33683a6a47d617c3dc278a4de4da6f81 302 SUPERFAMILY SSF53448 8 287 3.6E-62 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS09375 33683a6a47d617c3dc278a4de4da6f81 302 PANTHER PTHR22572:SF118 10 296 4.4E-146 T 22-04-2016 APT61_RS15060 dd52e45a39b3a131c2c0bcf0774a2db6 588 Pfam PF00005 ABC transporter 369 513 1.6E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS15060 dd52e45a39b3a131c2c0bcf0774a2db6 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS15060 dd52e45a39b3a131c2c0bcf0774a2db6 588 PANTHER PTHR24221 1 588 0.0 T 22-04-2016 APT61_RS15060 dd52e45a39b3a131c2c0bcf0774a2db6 588 PANTHER PTHR24221:SF261 1 588 0.0 T 22-04-2016 APT61_RS15060 dd52e45a39b3a131c2c0bcf0774a2db6 588 SMART SM00382 375 560 4.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15060 dd52e45a39b3a131c2c0bcf0774a2db6 588 SUPERFAMILY SSF90123 11 331 9.29E-56 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS15060 dd52e45a39b3a131c2c0bcf0774a2db6 588 SUPERFAMILY SSF52540 345 581 2.81E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15060 dd52e45a39b3a131c2c0bcf0774a2db6 588 Gene3D G3DSA:1.20.1560.10 20 335 3.0E-46 T 22-04-2016 APT61_RS15060 dd52e45a39b3a131c2c0bcf0774a2db6 588 Pfam PF00664 ABC transporter transmembrane region 26 292 1.4E-47 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS15060 dd52e45a39b3a131c2c0bcf0774a2db6 588 Gene3D G3DSA:3.40.50.300 350 575 1.9E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15060 dd52e45a39b3a131c2c0bcf0774a2db6 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 21 556 2.6E-189 T 22-04-2016 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 APT61_RS02380 223f10cca981b2223d7d1fa1c8ebfe09 150 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 7 148 2.0E-59 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APT61_RS02380 223f10cca981b2223d7d1fa1c8ebfe09 150 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APT61_RS02380 223f10cca981b2223d7d1fa1c8ebfe09 150 Gene3D G3DSA:3.40.50.9100 5 147 1.8E-68 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APT61_RS02380 223f10cca981b2223d7d1fa1c8ebfe09 150 Pfam PF01220 Dehydroquinase class II 6 142 9.4E-61 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APT61_RS02380 223f10cca981b2223d7d1fa1c8ebfe09 150 SUPERFAMILY SSF52304 6 148 7.72E-63 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APT61_RS02380 223f10cca981b2223d7d1fa1c8ebfe09 150 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 1.1E-64 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APT61_RS02380 223f10cca981b2223d7d1fa1c8ebfe09 150 PANTHER PTHR21272 2 148 3.1E-91 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APT61_RS02380 223f10cca981b2223d7d1fa1c8ebfe09 150 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 150 75.401 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APT61_RS02380 223f10cca981b2223d7d1fa1c8ebfe09 150 PIRSF PIRSF001399 3 149 1.4E-62 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 APT61_RS05925 fa1212d972cc2813d1264b78a0694292 404 PIRSF PIRSF005572 2 384 4.1E-143 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 APT61_RS05925 fa1212d972cc2813d1264b78a0694292 404 SUPERFAMILY SSF53383 5 390 1.58E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS05925 fa1212d972cc2813d1264b78a0694292 404 PANTHER PTHR11601:SF45 4 404 1.2E-242 T 22-04-2016 APT61_RS05925 fa1212d972cc2813d1264b78a0694292 404 PANTHER PTHR11601 4 404 1.2E-242 T 22-04-2016 APT61_RS05925 fa1212d972cc2813d1264b78a0694292 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 55.515 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 APT61_RS05925 fa1212d972cc2813d1264b78a0694292 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 2.1E-234 T 22-04-2016 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|UniPathway: UPA00266 APT61_RS05925 fa1212d972cc2813d1264b78a0694292 404 Gene3D G3DSA:3.90.1150.10 255 374 1.4E-51 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS05925 fa1212d972cc2813d1264b78a0694292 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site APT61_RS05925 fa1212d972cc2813d1264b78a0694292 404 Gene3D G3DSA:3.40.640.10 17 254 1.2E-97 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS05925 fa1212d972cc2813d1264b78a0694292 404 Pfam PF00266 Aminotransferase class-V 5 368 3.8E-88 T 22-04-2016 IPR000192 Aminotransferase class V domain APT61_RS16160 de5285790b870d0c3cc9f030f1a04d38 310 Pfam PF02626 Allophanate hydrolase subunit 2 25 281 1.5E-90 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APT61_RS16160 de5285790b870d0c3cc9f030f1a04d38 310 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 309 3.3E-124 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APT61_RS16160 de5285790b870d0c3cc9f030f1a04d38 310 PANTHER PTHR18866 139 261 8.0E-39 T 22-04-2016 APT61_RS16160 de5285790b870d0c3cc9f030f1a04d38 310 SMART SM00797 23 298 4.4E-141 T 22-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B APT61_RS16160 de5285790b870d0c3cc9f030f1a04d38 310 SUPERFAMILY SSF50891 173 288 5.69E-11 T 22-04-2016 IPR029000 Cyclophilin-like domain APT61_RS07540 0e3c1321ac7ea3ef0c529aec7c39c7cc 299 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 4 299 47.592 T 22-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 APT61_RS07540 0e3c1321ac7ea3ef0c529aec7c39c7cc 299 SUPERFAMILY SSF111331 8 296 4.8E-69 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain APT61_RS07540 0e3c1321ac7ea3ef0c529aec7c39c7cc 299 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 3.6E-102 T 22-04-2016 IPR005218 Diacylglycerol/lipid kinase APT61_RS07540 0e3c1321ac7ea3ef0c529aec7c39c7cc 299 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 7 298 4.1E-136 T 22-04-2016 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 APT61_RS07540 0e3c1321ac7ea3ef0c529aec7c39c7cc 299 PANTHER PTHR12358 8 299 2.2E-64 T 22-04-2016 APT61_RS07540 0e3c1321ac7ea3ef0c529aec7c39c7cc 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 129 5.1E-29 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 APT61_RS07540 0e3c1321ac7ea3ef0c529aec7c39c7cc 299 SMART SM00046 6 133 1.5E-24 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 APT61_RS18545 d6fc91f837f3572196a2b9b0d59eb6c0 347 SUPERFAMILY SSF51412 6 336 2.75E-99 T 22-04-2016 APT61_RS18545 d6fc91f837f3572196a2b9b0d59eb6c0 347 PIRSF PIRSF000235 1 347 2.9E-198 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 APT61_RS18545 d6fc91f837f3572196a2b9b0d59eb6c0 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 APT61_RS18545 d6fc91f837f3572196a2b9b0d59eb6c0 347 PANTHER PTHR11911:SF97 1 163 8.0E-223 T 22-04-2016 APT61_RS18545 d6fc91f837f3572196a2b9b0d59eb6c0 347 PANTHER PTHR11911:SF97 181 347 8.0E-223 T 22-04-2016 APT61_RS18545 d6fc91f837f3572196a2b9b0d59eb6c0 347 PANTHER PTHR11911 1 163 8.0E-223 T 22-04-2016 APT61_RS18545 d6fc91f837f3572196a2b9b0d59eb6c0 347 PANTHER PTHR11911 181 347 8.0E-223 T 22-04-2016 APT61_RS18545 d6fc91f837f3572196a2b9b0d59eb6c0 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 7.5E-207 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 APT61_RS18545 d6fc91f837f3572196a2b9b0d59eb6c0 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 8.3E-79 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 APT61_RS18545 d6fc91f837f3572196a2b9b0d59eb6c0 347 SMART SM01240 7 344 8.8E-139 T 22-04-2016 APT61_RS18545 d6fc91f837f3572196a2b9b0d59eb6c0 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.907 T 22-04-2016 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: REACT_1698 APT61_RS18545 d6fc91f837f3572196a2b9b0d59eb6c0 347 Gene3D G3DSA:3.20.20.70 2 343 8.3E-112 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS16415 e97c7ec1accac6fbc2bad6b5eeacaa42 633 Gene3D G3DSA:3.40.710.10 253 611 3.5E-98 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS16415 e97c7ec1accac6fbc2bad6b5eeacaa42 633 PANTHER PTHR30627:SF2 5 625 1.3E-275 T 22-04-2016 APT61_RS16415 e97c7ec1accac6fbc2bad6b5eeacaa42 633 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 612 3.2E-238 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 APT61_RS16415 e97c7ec1accac6fbc2bad6b5eeacaa42 633 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 239 4.4E-45 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APT61_RS16415 e97c7ec1accac6fbc2bad6b5eeacaa42 633 PANTHER PTHR30627 5 625 1.3E-275 T 22-04-2016 APT61_RS16415 e97c7ec1accac6fbc2bad6b5eeacaa42 633 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 609 2.1E-83 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APT61_RS16415 e97c7ec1accac6fbc2bad6b5eeacaa42 633 SUPERFAMILY SSF56601 254 610 5.11E-91 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS16415 e97c7ec1accac6fbc2bad6b5eeacaa42 633 SUPERFAMILY SSF56519 56 253 2.75E-53 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 APT61_RS16415 e97c7ec1accac6fbc2bad6b5eeacaa42 633 Gene3D G3DSA:3.90.1310.10 130 252 3.7E-40 T 22-04-2016 APT61_RS19535 faa6c757070360e89db98c784682e843 214 Pfam PF01810 LysE type translocator 21 206 6.0E-22 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS19535 faa6c757070360e89db98c784682e843 214 PANTHER PTHR30086 7 209 1.2E-31 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS00475 7a8ce40f19ca4b89c1a532b1e3fb4e02 304 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 1.8E-25 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain APT61_RS00475 7a8ce40f19ca4b89c1a532b1e3fb4e02 304 Gene3D G3DSA:1.20.1510.10 11 206 6.0E-46 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain APT61_RS00475 7a8ce40f19ca4b89c1a532b1e3fb4e02 304 SUPERFAMILY SSF161111 8 207 1.44E-52 T 22-04-2016 APT61_RS00475 7a8ce40f19ca4b89c1a532b1e3fb4e02 304 PANTHER PTHR11562 1 296 2.0E-124 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APT61_RS00475 7a8ce40f19ca4b89c1a532b1e3fb4e02 304 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 288 2.6E-79 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APT61_RS00475 7a8ce40f19ca4b89c1a532b1e3fb4e02 304 Gene3D G3DSA:3.30.70.1350 207 288 1.5E-30 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain APT61_RS00475 7a8ce40f19ca4b89c1a532b1e3fb4e02 304 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 63.573 T 22-04-2016 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 APT61_RS00475 7a8ce40f19ca4b89c1a532b1e3fb4e02 304 PANTHER PTHR11562:SF55 1 296 2.0E-124 T 22-04-2016 APT61_RS00475 7a8ce40f19ca4b89c1a532b1e3fb4e02 304 SUPERFAMILY SSF160240 209 288 1.09E-24 T 22-04-2016 APT61_RS00475 7a8ce40f19ca4b89c1a532b1e3fb4e02 304 Pfam PF01545 Cation efflux family 15 206 4.7E-46 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 SUPERFAMILY SSF56935 23 359 3.36E-70 T 22-04-2016 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 PANTHER PTHR34501 3 359 3.5E-184 T 22-04-2016 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 PANTHER PTHR34501:SF6 3 359 3.5E-184 T 22-04-2016 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 54 65 4.3E-16 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 96 106 4.3E-16 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 227 239 4.3E-16 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 153 164 4.3E-16 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 311 328 4.3E-16 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 Gene3D G3DSA:2.40.160.10 23 359 3.1E-89 T 22-04-2016 IPR023614 Porin domain APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 Pfam PF00267 Gram-negative porin 28 359 1.0E-122 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 PRINTS PR00183 E.coli/Salmonella-type porin signature 233 250 7.4E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 PRINTS PR00183 E.coli/Salmonella-type porin signature 23 39 7.4E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 PRINTS PR00183 E.coli/Salmonella-type porin signature 151 173 7.4E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 7.4E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 PRINTS PR00183 E.coli/Salmonella-type porin signature 53 71 7.4E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS14870 4fb49c80521e47ed857a510121126f42 359 PRINTS PR00183 E.coli/Salmonella-type porin signature 262 281 7.4E-65 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS19410 b88a4595e78deecdf0a187b4f67a281b 298 Pfam PF01697 Glycosyltransferase family 92 15 143 6.5E-17 T 22-04-2016 IPR008166 Glycosyltransferase family 92 APT61_RS19410 b88a4595e78deecdf0a187b4f67a281b 298 SUPERFAMILY SSF53448 11 138 4.5E-5 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS19410 b88a4595e78deecdf0a187b4f67a281b 298 PANTHER PTHR21461:SF15 12 252 5.1E-24 T 22-04-2016 APT61_RS19410 b88a4595e78deecdf0a187b4f67a281b 298 PANTHER PTHR21461 12 252 5.1E-24 T 22-04-2016 APT61_RS05005 c5a2ee3b8abfe12cbe47873fa5a5ef9b 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 295 464 7.7E-34 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 APT61_RS05005 c5a2ee3b8abfe12cbe47873fa5a5ef9b 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 465 537 1.0E-10 T 22-04-2016 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 APT61_RS05005 c5a2ee3b8abfe12cbe47873fa5a5ef9b 569 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 151 1.0E-24 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 APT61_RS05005 c5a2ee3b8abfe12cbe47873fa5a5ef9b 569 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 216 227 - T 22-04-2016 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 APT61_RS05005 c5a2ee3b8abfe12cbe47873fa5a5ef9b 569 SUPERFAMILY SSF56762 193 537 1.31E-107 T 22-04-2016 IPR029014 NiFe hydrogenase-like APT61_RS05005 c5a2ee3b8abfe12cbe47873fa5a5ef9b 569 PANTHER PTHR11993 124 544 0.0 T 22-04-2016 APT61_RS05005 c5a2ee3b8abfe12cbe47873fa5a5ef9b 569 Gene3D G3DSA:1.10.645.10 406 536 4.0E-30 T 22-04-2016 IPR029014 NiFe hydrogenase-like APT61_RS05005 c5a2ee3b8abfe12cbe47873fa5a5ef9b 569 Gene3D G3DSA:1.10.645.10 166 405 3.0E-56 T 22-04-2016 IPR029014 NiFe hydrogenase-like APT61_RS05005 c5a2ee3b8abfe12cbe47873fa5a5ef9b 569 Pfam PF00374 Nickel-dependent hydrogenase 218 286 8.7E-13 T 22-04-2016 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 APT61_RS05005 c5a2ee3b8abfe12cbe47873fa5a5ef9b 569 SUPERFAMILY SSF143243 9 194 5.49E-46 T 22-04-2016 APT61_RS05005 c5a2ee3b8abfe12cbe47873fa5a5ef9b 569 PANTHER PTHR11993:SF30 124 544 0.0 T 22-04-2016 APT61_RS05005 c5a2ee3b8abfe12cbe47873fa5a5ef9b 569 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 36 152 8.1E-25 T 22-04-2016 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 APT61_RS03025 d1402bd726da9e2b199d563cab8d4fe4 104 Pfam PF13997 YqjK-like protein 15 87 1.1E-26 T 22-04-2016 IPR025612 YqjK-like protein APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 153 258 1.1E-22 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 3.1E-31 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 3.1E-31 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 3.1E-31 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 209 222 3.1E-31 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 SUPERFAMILY SSF53738 3 176 8.24E-40 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 PANTHER PTHR22573:SF18 7 456 1.2E-194 T 22-04-2016 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 Gene3D G3DSA:3.40.120.10 255 368 4.5E-42 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 454 7.1E-11 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 SUPERFAMILY SSF55957 374 456 2.96E-17 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 SUPERFAMILY SSF53738 153 261 1.18E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 Gene3D G3DSA:3.40.120.10 6 150 1.3E-36 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 372 1.0E-25 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 121 1.4E-32 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 SUPERFAMILY SSF53738 263 368 1.37E-33 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 Gene3D G3DSA:3.40.120.10 172 254 7.3E-28 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 PANTHER PTHR22573 7 456 1.2E-194 T 22-04-2016 APT61_RS07725 826cf4452f062c6422d1d0f52d8eb8ec 456 Gene3D G3DSA:3.30.310.50 375 455 1.2E-17 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 APT61_RS19835 ba138935750bf8c2aac37128de0a2ea1 417 Gene3D G3DSA:1.10.443.10 224 387 5.9E-19 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS19835 ba138935750bf8c2aac37128de0a2ea1 417 Gene3D G3DSA:1.10.150.130 99 193 1.7E-14 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APT61_RS19835 ba138935750bf8c2aac37128de0a2ea1 417 Pfam PF13356 Domain of unknown function (DUF4102) 3 89 2.7E-20 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 APT61_RS19835 ba138935750bf8c2aac37128de0a2ea1 417 SUPERFAMILY SSF56349 99 389 5.0E-50 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APT61_RS19835 ba138935750bf8c2aac37128de0a2ea1 417 PANTHER PTHR30629:SF4 1 416 2.9E-139 T 22-04-2016 APT61_RS19835 ba138935750bf8c2aac37128de0a2ea1 417 PANTHER PTHR30629 1 416 2.9E-139 T 22-04-2016 APT61_RS19835 ba138935750bf8c2aac37128de0a2ea1 417 Pfam PF00589 Phage integrase family 224 384 1.0E-15 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS07995 75acf1f37bca645c5a1fd674309136fa 470 Pfam PF00145 C-5 cytosine-specific DNA methylase 86 447 2.5E-72 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS07995 75acf1f37bca645c5a1fd674309136fa 470 PANTHER PTHR10629 16 466 2.5E-94 T 22-04-2016 APT61_RS07995 75acf1f37bca645c5a1fd674309136fa 470 Gene3D G3DSA:3.90.120.10 319 437 1.0E-28 T 22-04-2016 APT61_RS07995 75acf1f37bca645c5a1fd674309136fa 470 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 270 283 3.6E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APT61_RS07995 75acf1f37bca645c5a1fd674309136fa 470 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 216 230 3.6E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APT61_RS07995 75acf1f37bca645c5a1fd674309136fa 470 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 87 103 3.6E-15 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APT61_RS07995 75acf1f37bca645c5a1fd674309136fa 470 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 168 180 - T 22-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 APT61_RS07995 75acf1f37bca645c5a1fd674309136fa 470 SUPERFAMILY SSF53335 86 449 5.59E-78 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS07995 75acf1f37bca645c5a1fd674309136fa 470 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 88 447 7.9E-99 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 APT61_RS07995 75acf1f37bca645c5a1fd674309136fa 470 PANTHER PTHR10629:SF31 16 466 2.5E-94 T 22-04-2016 APT61_RS07995 75acf1f37bca645c5a1fd674309136fa 470 Gene3D G3DSA:3.40.50.150 85 318 1.2E-57 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS19365 b41521e9dccad8282235f8b67ef2fbd0 520 Gene3D G3DSA:1.20.140.10 274 489 1.2E-35 T 22-04-2016 APT61_RS19365 b41521e9dccad8282235f8b67ef2fbd0 520 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 288 489 1.8E-65 T 22-04-2016 IPR024719 HpaB/PvcC/4-BUDH C-terminal APT61_RS19365 b41521e9dccad8282235f8b67ef2fbd0 520 Gene3D G3DSA:1.10.3140.10 12 150 1.9E-57 T 22-04-2016 APT61_RS19365 b41521e9dccad8282235f8b67ef2fbd0 520 Gene3D G3DSA:2.40.110.10 152 273 4.0E-47 T 22-04-2016 APT61_RS19365 b41521e9dccad8282235f8b67ef2fbd0 520 SUPERFAMILY SSF47203 272 494 3.77E-45 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 APT61_RS19365 b41521e9dccad8282235f8b67ef2fbd0 520 PIRSF PIRSF500125 1 518 7.8E-289 T 22-04-2016 IPR024677 4-HPA 3-monooxygenase large component/Pyoverdin chromophore biosynthetic protein APT61_RS19365 b41521e9dccad8282235f8b67ef2fbd0 520 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 15 281 5.9E-93 T 22-04-2016 IPR024674 HpaB/PvcC/4-BUDH N-terminal APT61_RS19365 b41521e9dccad8282235f8b67ef2fbd0 520 PANTHER PTHR36117 1 516 0.0 T 22-04-2016 APT61_RS19365 b41521e9dccad8282235f8b67ef2fbd0 520 PANTHER PTHR36117:SF1 1 516 0.0 T 22-04-2016 APT61_RS19365 b41521e9dccad8282235f8b67ef2fbd0 520 SUPERFAMILY SSF56645 13 282 9.16E-83 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 APT61_RS19365 b41521e9dccad8282235f8b67ef2fbd0 520 PIRSF PIRSF000331 11 501 1.4E-204 T 22-04-2016 IPR004925 HpaB/PvcC/4-BUDH APT61_RS19365 b41521e9dccad8282235f8b67ef2fbd0 520 TIGRFAM TIGR02310 HpaB-2: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 2 520 0.0 T 22-04-2016 IPR012688 4-HPA 3-monooxygenase large component, gammaproteobacteria GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431|UniPathway: UPA00208 APT61_RS20570 ef565503c759af58b3b6c83b8f50dc49 370 SUPERFAMILY SSF53756 7 365 1.4E-61 T 22-04-2016 APT61_RS20570 ef565503c759af58b3b6c83b8f50dc49 370 PANTHER PTHR12526 1 365 6.0E-38 T 22-04-2016 APT61_RS20570 ef565503c759af58b3b6c83b8f50dc49 370 Pfam PF00534 Glycosyl transferases group 1 198 338 1.0E-21 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APT61_RS20570 ef565503c759af58b3b6c83b8f50dc49 370 Gene3D G3DSA:3.40.50.2000 183 304 4.0E-18 T 22-04-2016 APT61_RS20570 ef565503c759af58b3b6c83b8f50dc49 370 Pfam PF13439 Glycosyltransferase Family 4 18 178 1.5E-17 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 TIGRFAM TIGR00016 ackA: acetate kinase 5 393 9.6E-160 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 PIRSF PIRSF000722 4 396 4.8E-134 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 PANTHER PTHR21060 3 402 2.2E-275 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 SUPERFAMILY SSF53067 153 392 7.45E-87 T 22-04-2016 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 PANTHER PTHR21060:SF17 3 402 2.2E-275 T 22-04-2016 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 Gene3D G3DSA:3.30.420.40 201 391 2.3E-72 T 22-04-2016 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 Gene3D G3DSA:3.30.420.40 7 200 3.8E-13 T 22-04-2016 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 PRINTS PR00471 Acetate kinase family signature 296 309 1.3E-47 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 PRINTS PR00471 Acetate kinase family signature 169 182 1.3E-47 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 PRINTS PR00471 Acetate kinase family signature 318 334 1.3E-47 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 PRINTS PR00471 Acetate kinase family signature 7 18 1.3E-47 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 PRINTS PR00471 Acetate kinase family signature 199 220 1.3E-47 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 PRINTS PR00471 Acetate kinase family signature 374 386 1.3E-47 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 Hamap MF_00020 Acetate kinase [ackA]. 1 396 166.196 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 Hamap MF_01881 Propionate kinase [tdcD]. 1 402 69.96 T 22-04-2016 IPR024917 Propionate kinase KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013|UniPathway: UPA00052 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 Pfam PF00871 Acetokinase family 7 386 1.2E-157 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS02980 6d4265977809aeabfb8481961cf485e5 402 SUPERFAMILY SSF53067 5 191 1.2E-63 T 22-04-2016 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 220 232 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 172 192 8.9E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 45 64 8.9E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 217 242 8.9E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 64 84 8.9E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 84 103 8.9E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 193 214 8.9E-68 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 47 243 8.1E-94 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 PANTHER PTHR30587:SF0 27 245 4.5E-126 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 172 187 - T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 43 52 3.5E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 3.5E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 165 177 3.5E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 129 3.5E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 103 115 3.5E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 233 243 3.5E-33 T 22-04-2016 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 Pfam PF00813 FliP family 48 239 2.2E-78 T 22-04-2016 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 APT61_RS08055 a35274346bcc2d0ee1c15133718999f2 245 PANTHER PTHR30587 27 245 4.5E-126 T 22-04-2016 APT61_RS07560 ea6cc20717014d1a27593f2944ce25c1 175 Pfam PF01292 Prokaryotic cytochrome b561 10 175 1.1E-15 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APT61_RS07560 ea6cc20717014d1a27593f2944ce25c1 175 SUPERFAMILY SSF81342 5 175 5.41E-18 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APT61_RS07560 ea6cc20717014d1a27593f2944ce25c1 175 PANTHER PTHR30529 3 175 4.6E-12 T 22-04-2016 APT61_RS15150 c20fed27803557043959d738bedd599d 333 Gene3D G3DSA:3.40.640.10 1 245 8.6E-86 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS15150 c20fed27803557043959d738bedd599d 333 PIRSF PIRSF017617 1 333 3.8E-127 T 22-04-2016 IPR023603 Threonine aldolase APT61_RS15150 c20fed27803557043959d738bedd599d 333 SUPERFAMILY SSF53383 1 332 6.99E-112 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS15150 c20fed27803557043959d738bedd599d 333 Gene3D G3DSA:3.90.1150.10 246 332 5.2E-25 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS15150 c20fed27803557043959d738bedd599d 333 PANTHER PTHR10289 1 333 9.4E-153 T 22-04-2016 APT61_RS15150 c20fed27803557043959d738bedd599d 333 Pfam PF01212 Beta-eliminating lyase 3 281 1.1E-92 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 APT61_RS22225 56b533cc370c1e28d908debdcf79489b 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 22-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site APT61_RS22225 56b533cc370c1e28d908debdcf79489b 79 Pfam PF00137 ATP synthase subunit C 11 69 1.6E-9 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APT61_RS22225 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.58E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APT61_RS22225 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.58E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APT61_RS22225 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.58E-8 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APT61_RS22225 56b533cc370c1e28d908debdcf79489b 79 Gene3D G3DSA:1.20.20.10 2 77 5.0E-31 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 APT61_RS22225 56b533cc370c1e28d908debdcf79489b 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 77 14.331 T 22-04-2016 APT61_RS22225 56b533cc370c1e28d908debdcf79489b 79 SUPERFAMILY SSF81333 3 77 4.58E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 APT61_RS22225 56b533cc370c1e28d908debdcf79489b 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 APT61_RS22225 56b533cc370c1e28d908debdcf79489b 79 PANTHER PTHR10031 1 78 6.8E-25 T 22-04-2016 APT61_RS15345 0f346fbce43b5ed1dc8c6f78ba3e4e6a 89 PANTHER PTHR10168:SF85 4 81 4.2E-42 T 22-04-2016 APT61_RS15345 0f346fbce43b5ed1dc8c6f78ba3e4e6a 89 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 APT61_RS15345 0f346fbce43b5ed1dc8c6f78ba3e4e6a 89 Pfam PF00462 Glutaredoxin 4 69 2.2E-15 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APT61_RS15345 0f346fbce43b5ed1dc8c6f78ba3e4e6a 89 SUPERFAMILY SSF52833 4 81 1.74E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS15345 0f346fbce43b5ed1dc8c6f78ba3e4e6a 89 PANTHER PTHR10168 4 81 4.2E-42 T 22-04-2016 APT61_RS15345 0f346fbce43b5ed1dc8c6f78ba3e4e6a 89 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 4.2E-47 T 22-04-2016 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 APT61_RS15345 0f346fbce43b5ed1dc8c6f78ba3e4e6a 89 Gene3D G3DSA:3.40.30.10 4 81 7.0E-25 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS15345 0f346fbce43b5ed1dc8c6f78ba3e4e6a 89 PRINTS PR00160 Glutaredoxin signature 3 21 6.6E-10 T 22-04-2016 IPR014025 Glutaredoxin subgroup APT61_RS15345 0f346fbce43b5ed1dc8c6f78ba3e4e6a 89 PRINTS PR00160 Glutaredoxin signature 66 79 6.6E-10 T 22-04-2016 IPR014025 Glutaredoxin subgroup APT61_RS15345 0f346fbce43b5ed1dc8c6f78ba3e4e6a 89 PRINTS PR00160 Glutaredoxin signature 52 65 6.6E-10 T 22-04-2016 IPR014025 Glutaredoxin subgroup APT61_RS17360 c347c23d1e55242b1e04e3f482c067a9 108 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 19 91 7.1E-19 T 22-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 APT61_RS17360 c347c23d1e55242b1e04e3f482c067a9 108 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 11 106 6.6E-38 T 22-04-2016 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 APT61_RS17360 c347c23d1e55242b1e04e3f482c067a9 108 PANTHER PTHR36835 1 108 2.4E-40 T 22-04-2016 APT61_RS14395 7a84b902548a9303f9e50efe0d2c768a 128 Pfam PF01042 Endoribonuclease L-PSP 14 125 1.6E-32 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APT61_RS14395 7a84b902548a9303f9e50efe0d2c768a 128 SUPERFAMILY SSF55298 2 127 1.88E-36 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APT61_RS14395 7a84b902548a9303f9e50efe0d2c768a 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 22-04-2016 IPR019897 RidA, conserved site APT61_RS14395 7a84b902548a9303f9e50efe0d2c768a 128 Gene3D G3DSA:3.30.1330.40 4 125 9.2E-34 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like APT61_RS14395 7a84b902548a9303f9e50efe0d2c768a 128 TIGRFAM TIGR03610 RutC: pyrimidine utilization protein C 1 127 2.8E-74 T 22-04-2016 IPR019898 Putative aminoacrylate peracid reductase RutC APT61_RS14395 7a84b902548a9303f9e50efe0d2c768a 128 Hamap MF_00831 Putative aminoacrylate peracid reductase RutC [rutC]. 1 128 43.778 T 22-04-2016 IPR019898 Putative aminoacrylate peracid reductase RutC APT61_RS14395 7a84b902548a9303f9e50efe0d2c768a 128 PANTHER PTHR11803 5 128 4.5E-35 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family APT61_RS19275 826610e356104ed5051bef7de7582081 181 Hamap MF_01061 Primosomal protein 1 [dnaT]. 3 180 39.026 T 22-04-2016 IPR020917 Primosomal protein 1 GO:0006260 APT61_RS08545 1075cd7465a659fcc4a296b864ab4fb4 188 PANTHER PTHR11080:SF37 1 188 3.4E-77 T 22-04-2016 APT61_RS08545 1075cd7465a659fcc4a296b864ab4fb4 188 Pfam PF00857 Isochorismatase family 9 183 9.6E-41 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS08545 1075cd7465a659fcc4a296b864ab4fb4 188 Gene3D G3DSA:3.40.50.850 2 185 4.2E-53 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS08545 1075cd7465a659fcc4a296b864ab4fb4 188 SUPERFAMILY SSF52499 3 188 2.09E-52 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS08545 1075cd7465a659fcc4a296b864ab4fb4 188 PANTHER PTHR11080 1 188 3.4E-77 T 22-04-2016 APT61_RS16210 cf0612ed0d3d357ccbfb4c6ba06889e0 225 Pfam PF00072 Response regulator receiver domain 4 112 9.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS16210 cf0612ed0d3d357ccbfb4c6ba06889e0 225 Gene3D G3DSA:1.10.10.10 126 223 1.2E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS16210 cf0612ed0d3d357ccbfb4c6ba06889e0 225 SMART SM00448 2 112 2.4E-36 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS16210 cf0612ed0d3d357ccbfb4c6ba06889e0 225 PANTHER PTHR26402 2 224 8.9E-107 T 22-04-2016 APT61_RS16210 cf0612ed0d3d357ccbfb4c6ba06889e0 225 Gene3D G3DSA:3.40.50.2300 2 123 3.8E-35 T 22-04-2016 APT61_RS16210 cf0612ed0d3d357ccbfb4c6ba06889e0 225 SMART SM00862 147 223 8.9E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS16210 cf0612ed0d3d357ccbfb4c6ba06889e0 225 SUPERFAMILY SSF52172 3 175 3.81E-38 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS16210 cf0612ed0d3d357ccbfb4c6ba06889e0 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 3.0E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS16210 cf0612ed0d3d357ccbfb4c6ba06889e0 225 PANTHER PTHR26402:SF399 2 224 8.9E-107 T 22-04-2016 APT61_RS16070 facfff868122d7f4affbc3711c2b32b6 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.2E-173 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 APT61_RS16070 facfff868122d7f4affbc3711c2b32b6 522 PANTHER PTHR30365 1 310 4.3E-268 T 22-04-2016 APT61_RS16070 facfff868122d7f4affbc3711c2b32b6 522 PANTHER PTHR30365 376 520 4.3E-268 T 22-04-2016 APT61_RS16070 facfff868122d7f4affbc3711c2b32b6 522 PANTHER PTHR30365:SF0 1 310 4.3E-268 T 22-04-2016 APT61_RS16070 facfff868122d7f4affbc3711c2b32b6 522 PANTHER PTHR30365:SF0 376 520 4.3E-268 T 22-04-2016 APT61_RS14765 bf3a55714ec049d5fb2ddb3da9ec9208 169 TIGRFAM TIGR00623 sula: cell division inhibitor SulA 2 169 7.0E-92 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 APT61_RS14765 bf3a55714ec049d5fb2ddb3da9ec9208 169 Pfam PF03846 Cell division inhibitor SulA 7 119 3.4E-54 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 APT61_RS14765 bf3a55714ec049d5fb2ddb3da9ec9208 169 PIRSF PIRSF003093 1 169 1.6E-82 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 APT61_RS14765 bf3a55714ec049d5fb2ddb3da9ec9208 169 Gene3D G3DSA:3.40.50.300 31 147 7.5E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14765 bf3a55714ec049d5fb2ddb3da9ec9208 169 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 169 41.755 T 22-04-2016 IPR004596 Cell division suppressor protein, SulA GO:0009276|GO:0009432|GO:0051782 APT61_RS14765 bf3a55714ec049d5fb2ddb3da9ec9208 169 SUPERFAMILY SSF52540 31 147 3.82E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14765 bf3a55714ec049d5fb2ddb3da9ec9208 169 PANTHER PTHR35369 6 169 1.9E-51 T 22-04-2016 APT61_RS22190 e0ca944342b80dce1e94d5b68d1d7e9d 697 Pfam PF13229 Right handed beta helix region 469 557 3.3E-5 T 22-04-2016 APT61_RS22190 e0ca944342b80dce1e94d5b68d1d7e9d 697 SUPERFAMILY SSF51126 376 690 3.98E-48 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor APT61_RS22190 e0ca944342b80dce1e94d5b68d1d7e9d 697 SMART SM00710 472 494 71.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat APT61_RS22190 e0ca944342b80dce1e94d5b68d1d7e9d 697 SMART SM00710 564 586 820.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat APT61_RS22190 e0ca944342b80dce1e94d5b68d1d7e9d 697 SMART SM00710 535 557 21.0 T 22-04-2016 IPR006626 Parallel beta-helix repeat APT61_RS22190 e0ca944342b80dce1e94d5b68d1d7e9d 697 Gene3D G3DSA:2.160.20.10 377 686 1.2E-54 T 22-04-2016 IPR012334 Pectin lyase fold APT61_RS14120 5cbcc41cbb2d6592c4de85cec420f791 216 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 212 34.421 T 22-04-2016 IPR007432 Protein of unknown function DUF480 APT61_RS14120 5cbcc41cbb2d6592c4de85cec420f791 216 Gene3D G3DSA:1.10.10.10 3 87 3.4E-39 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14120 5cbcc41cbb2d6592c4de85cec420f791 216 Pfam PF04337 Protein of unknown function, DUF480 5 158 1.2E-63 T 22-04-2016 IPR007432 Protein of unknown function DUF480 APT61_RS14120 5cbcc41cbb2d6592c4de85cec420f791 216 SUPERFAMILY SSF46785 2 84 7.96E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14120 5cbcc41cbb2d6592c4de85cec420f791 216 Gene3D G3DSA:1.10.10.10 95 173 1.5E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14120 5cbcc41cbb2d6592c4de85cec420f791 216 PANTHER PTHR38768 1 216 6.6E-91 T 22-04-2016 APT61_RS14120 5cbcc41cbb2d6592c4de85cec420f791 216 SUPERFAMILY SSF46785 90 173 1.66E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14120 5cbcc41cbb2d6592c4de85cec420f791 216 PANTHER PTHR38768:SF1 1 216 6.6E-91 T 22-04-2016 APT61_RS19805 c80493b31197d6a06a5a384b8b7e47fd 339 Pfam PF09518 HindIII restriction endonuclease 44 287 4.6E-42 T 22-04-2016 IPR019043 Restriction endonuclease, type II, HindIII APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 Gene3D G3DSA:3.90.700.10 244 348 5.8E-38 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 PANTHER PTHR11632 9 539 1.5E-269 T 22-04-2016 APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 Pfam PF00890 FAD binding domain 10 392 1.5E-104 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 7.6E-5 T 22-04-2016 APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 7.6E-5 T 22-04-2016 APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 SUPERFAMILY SSF56425 238 353 1.38E-41 T 22-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 PANTHER PTHR11632:SF27 9 539 1.5E-269 T 22-04-2016 APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 Gene3D G3DSA:1.20.58.100 413 522 1.5E-35 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 SUPERFAMILY SSF46977 425 523 6.93E-32 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 522 2.5E-14 T 22-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 SUPERFAMILY SSF51905 356 447 8.82E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 SUPERFAMILY SSF51905 4 255 8.82E-73 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 Gene3D G3DSA:3.50.50.60 2 243 1.6E-101 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 Gene3D G3DSA:3.50.50.60 349 409 1.6E-101 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 8 520 1.8E-232 T 22-04-2016 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342|UniPathway: UPA00253 APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.7E-10 T 22-04-2016 APT61_RS05760 573697ca49f2cc020e8177489434fc6c 539 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.7E-10 T 22-04-2016 APT61_RS02715 6e8907981b52243c99437f6be4d9980f 323 PANTHER PTHR12001 8 323 5.2E-127 T 22-04-2016 IPR017446 Polyprenyl synthetase-related APT61_RS02715 6e8907981b52243c99437f6be4d9980f 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APT61_RS02715 6e8907981b52243c99437f6be4d9980f 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APT61_RS02715 6e8907981b52243c99437f6be4d9980f 323 Gene3D G3DSA:1.10.600.10 3 322 6.7E-104 T 22-04-2016 IPR008949 Isoprenoid synthase domain APT61_RS02715 6e8907981b52243c99437f6be4d9980f 323 PANTHER PTHR12001:SF47 8 323 5.2E-127 T 22-04-2016 APT61_RS02715 6e8907981b52243c99437f6be4d9980f 323 SUPERFAMILY SSF48576 6 322 4.46E-102 T 22-04-2016 IPR008949 Isoprenoid synthase domain APT61_RS02715 6e8907981b52243c99437f6be4d9980f 323 Pfam PF00348 Polyprenyl synthetase 31 263 4.3E-75 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 APT61_RS07135 c380b6db8944e460113eacec3a6daeb9 364 SUPERFAMILY SSF161098 131 346 4.84E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07135 c380b6db8944e460113eacec3a6daeb9 364 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 152 359 3.8E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07135 c380b6db8944e460113eacec3a6daeb9 364 Gene3D G3DSA:1.10.3720.10 131 351 6.8E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07135 c380b6db8944e460113eacec3a6daeb9 364 PANTHER PTHR30465 70 361 4.9E-223 T 22-04-2016 APT61_RS07135 c380b6db8944e460113eacec3a6daeb9 364 PANTHER PTHR30465 1 45 4.9E-223 T 22-04-2016 APT61_RS07135 c380b6db8944e460113eacec3a6daeb9 364 PANTHER PTHR30465:SF66 70 361 4.9E-223 T 22-04-2016 APT61_RS07135 c380b6db8944e460113eacec3a6daeb9 364 PANTHER PTHR30465:SF66 1 45 4.9E-223 T 22-04-2016 APT61_RS14970 be353763582a233c7881e99844825050 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 2.0E-155 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APT61_RS14970 be353763582a233c7881e99844825050 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 423 2.7E-144 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS14970 be353763582a233c7881e99844825050 427 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS14970 be353763582a233c7881e99844825050 427 Gene3D G3DSA:3.65.10.10 22 237 9.9E-69 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APT61_RS14970 be353763582a233c7881e99844825050 427 Gene3D G3DSA:3.65.10.10 238 422 7.9E-73 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 APT61_RS14970 be353763582a233c7881e99844825050 427 PANTHER PTHR21090 1 424 9.3E-219 T 22-04-2016 APT61_RS14970 be353763582a233c7881e99844825050 427 PIRSF PIRSF000505 1 426 1.1E-155 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS14970 be353763582a233c7881e99844825050 427 SUPERFAMILY SSF55205 1 423 1.7E-145 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 APT61_RS14970 be353763582a233c7881e99844825050 427 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS14970 be353763582a233c7881e99844825050 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 35.672 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS01065 cd78cbc0a0be2e68f85ba450d55b7a73 458 PANTHER PTHR30563 37 451 5.8E-138 T 22-04-2016 APT61_RS01065 cd78cbc0a0be2e68f85ba450d55b7a73 458 Pfam PF02646 RmuC family 136 432 4.9E-107 T 22-04-2016 IPR003798 DNA recombination RmuC APT61_RS07700 b257b3c440094f586655055a0feade88 373 PANTHER PTHR10366:SF32 4 282 1.4E-217 T 22-04-2016 APT61_RS07700 b257b3c440094f586655055a0feade88 373 PANTHER PTHR10366:SF32 310 373 1.4E-217 T 22-04-2016 APT61_RS07700 b257b3c440094f586655055a0feade88 373 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 356 56.705 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 APT61_RS07700 b257b3c440094f586655055a0feade88 373 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 353 5.1E-178 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 APT61_RS07700 b257b3c440094f586655055a0feade88 373 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 346 2.9E-162 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07700 b257b3c440094f586655055a0feade88 373 Gene3D G3DSA:3.40.50.720 4 203 3.4E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07700 b257b3c440094f586655055a0feade88 373 SUPERFAMILY SSF51735 2 353 8.89E-91 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07700 b257b3c440094f586655055a0feade88 373 Gene3D G3DSA:3.90.25.10 304 363 4.6E-53 T 22-04-2016 APT61_RS07700 b257b3c440094f586655055a0feade88 373 Gene3D G3DSA:3.90.25.10 204 247 4.6E-53 T 22-04-2016 APT61_RS07700 b257b3c440094f586655055a0feade88 373 PANTHER PTHR10366 4 282 1.4E-217 T 22-04-2016 APT61_RS07700 b257b3c440094f586655055a0feade88 373 PANTHER PTHR10366 310 373 1.4E-217 T 22-04-2016 APT61_RS15320 028f7ff660e299f9e0e2302977d6cf6c 377 Pfam PF08402 TOBE domain 295 375 4.3E-19 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APT61_RS15320 028f7ff660e299f9e0e2302977d6cf6c 377 SUPERFAMILY SSF50331 253 375 4.0E-17 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APT61_RS15320 028f7ff660e299f9e0e2302977d6cf6c 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 1.2E-148 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 APT61_RS15320 028f7ff660e299f9e0e2302977d6cf6c 377 PANTHER PTHR24220:SF481 21 353 4.9E-201 T 22-04-2016 APT61_RS15320 028f7ff660e299f9e0e2302977d6cf6c 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS15320 028f7ff660e299f9e0e2302977d6cf6c 377 Gene3D G3DSA:3.40.50.300 11 254 1.4E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15320 028f7ff660e299f9e0e2302977d6cf6c 377 SMART SM00382 44 227 4.2E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15320 028f7ff660e299f9e0e2302977d6cf6c 377 PANTHER PTHR24220 21 353 4.9E-201 T 22-04-2016 APT61_RS15320 028f7ff660e299f9e0e2302977d6cf6c 377 SUPERFAMILY SSF52540 19 256 2.47E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15320 028f7ff660e299f9e0e2302977d6cf6c 377 Pfam PF00005 ABC transporter 36 177 1.1E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS20730 af0a9079ba455e5baa94f742a590f398 331 PANTHER PTHR32196:SF21 14 331 1.4E-112 T 22-04-2016 APT61_RS20730 af0a9079ba455e5baa94f742a590f398 331 PANTHER PTHR32196 14 331 1.4E-112 T 22-04-2016 APT61_RS20730 af0a9079ba455e5baa94f742a590f398 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 318 7.6E-44 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS19250 a317789446be1a072a9d8bd62cb2ad76 243 SUPERFAMILY SSF46894 145 208 1.87E-12 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS19250 a317789446be1a072a9d8bd62cb2ad76 243 SMART SM00421 150 207 8.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19250 a317789446be1a072a9d8bd62cb2ad76 243 Gene3D G3DSA:1.10.10.10 120 209 6.0E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19250 a317789446be1a072a9d8bd62cb2ad76 243 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 206 2.4E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS02660 57ff004c409b7a2bdcb4229502f67f0c 188 SUPERFAMILY SSF56784 23 181 9.04E-43 T 22-04-2016 IPR023214 HAD-like domain APT61_RS02660 57ff004c409b7a2bdcb4229502f67f0c 188 Pfam PF08282 haloacid dehalogenase-like hydrolase 95 162 6.5E-10 T 22-04-2016 IPR023214 HAD-like domain APT61_RS02660 57ff004c409b7a2bdcb4229502f67f0c 188 PIRSF PIRSF006118 13 188 2.9E-75 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APT61_RS02660 57ff004c409b7a2bdcb4229502f67f0c 188 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 7.0E-75 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APT61_RS02660 57ff004c409b7a2bdcb4229502f67f0c 188 Gene3D G3DSA:3.40.50.1000 15 181 4.1E-51 T 22-04-2016 IPR023214 HAD-like domain APT61_RS02660 57ff004c409b7a2bdcb4229502f67f0c 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 27 142 5.1E-13 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA APT61_RS02660 57ff004c409b7a2bdcb4229502f67f0c 188 PANTHER PTHR21485 5 186 4.2E-70 T 22-04-2016 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 SUPERFAMILY SSF160996 190 338 3.92E-43 T 22-04-2016 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 PANTHER PTHR10617:SF103 2 286 8.0E-136 T 22-04-2016 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 Gene3D G3DSA:2.40.30.10 188 269 4.3E-29 T 22-04-2016 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.0E-7 T 22-04-2016 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 4.0E-7 T 22-04-2016 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 4.0E-7 T 22-04-2016 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 Gene3D G3DSA:3.50.50.60 3 186 2.2E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 Gene3D G3DSA:3.50.50.60 339 395 2.2E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 Pfam PF03486 HI0933-like protein 5 392 3.9E-155 T 22-04-2016 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 PANTHER PTHR10617 330 396 8.0E-136 T 22-04-2016 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 PANTHER PTHR10617:SF103 330 396 8.0E-136 T 22-04-2016 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 PANTHER PTHR10617 2 286 8.0E-136 T 22-04-2016 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 391 1.3E-126 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like APT61_RS01310 9439fff56f58612176201b36283ef06a 398 SUPERFAMILY SSF51905 3 188 1.37E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 SUPERFAMILY SSF51905 337 395 1.37E-60 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS01310 9439fff56f58612176201b36283ef06a 398 Gene3D G3DSA:1.10.8.260 270 322 6.2E-25 T 22-04-2016 IPR023166 HI0933 insert-like domain APT61_RS04685 867a469339f81e294815ad8984508362 348 Gene3D G3DSA:3.40.630.10 38 344 8.8E-45 T 22-04-2016 APT61_RS04685 867a469339f81e294815ad8984508362 348 PANTHER PTHR12147 27 282 1.2E-38 T 22-04-2016 APT61_RS04685 867a469339f81e294815ad8984508362 348 PANTHER PTHR12147 301 342 1.2E-38 T 22-04-2016 APT61_RS04685 867a469339f81e294815ad8984508362 348 SUPERFAMILY SSF53187 41 316 4.86E-37 T 22-04-2016 APT61_RS04685 867a469339f81e294815ad8984508362 348 Pfam PF04389 Peptidase family M28 100 328 1.7E-31 T 22-04-2016 IPR007484 Peptidase M28 APT61_RS07285 eded3f3ab50e2ef9f25047b54346c9df 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 226 6.1E-104 T 22-04-2016 IPR005261 Conserved hypothetical protein CHP00659 APT61_RS07285 eded3f3ab50e2ef9f25047b54346c9df 231 PANTHER PTHR30249:SF5 1 230 1.1E-110 T 22-04-2016 APT61_RS07285 eded3f3ab50e2ef9f25047b54346c9df 231 Pfam PF04172 LrgB-like family 12 224 9.4E-78 T 22-04-2016 IPR007300 CidB/LrgB family APT61_RS07285 eded3f3ab50e2ef9f25047b54346c9df 231 PANTHER PTHR30249 1 230 1.1E-110 T 22-04-2016 APT61_RS12025 0ee8976bebae062c4f5cfae8d5f8ec3c 406 PANTHER PTHR18964:SF127 63 403 5.5E-240 T 22-04-2016 APT61_RS12025 0ee8976bebae062c4f5cfae8d5f8ec3c 406 Gene3D G3DSA:3.30.420.40 224 375 2.9E-44 T 22-04-2016 APT61_RS12025 0ee8976bebae062c4f5cfae8d5f8ec3c 406 SUPERFAMILY SSF53067 83 210 5.47E-23 T 22-04-2016 APT61_RS12025 0ee8976bebae062c4f5cfae8d5f8ec3c 406 Gene3D G3DSA:1.10.10.10 12 80 5.9E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS12025 0ee8976bebae062c4f5cfae8d5f8ec3c 406 SUPERFAMILY SSF53067 211 403 3.61E-44 T 22-04-2016 APT61_RS12025 0ee8976bebae062c4f5cfae8d5f8ec3c 406 Gene3D G3DSA:3.30.420.40 83 223 2.1E-31 T 22-04-2016 APT61_RS12025 0ee8976bebae062c4f5cfae8d5f8ec3c 406 PANTHER PTHR18964 63 403 5.5E-240 T 22-04-2016 APT61_RS12025 0ee8976bebae062c4f5cfae8d5f8ec3c 406 SUPERFAMILY SSF46785 12 77 4.32E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS12025 0ee8976bebae062c4f5cfae8d5f8ec3c 406 Pfam PF00480 ROK family 88 389 8.6E-53 T 22-04-2016 IPR000600 ROK family APT61_RS11230 722abe080de8556a3f32803f42715110 326 Pfam PF05426 Alginate lyase 51 283 1.1E-47 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 APT61_RS11230 722abe080de8556a3f32803f42715110 326 SUPERFAMILY SSF48230 35 324 9.15E-47 T 22-04-2016 IPR008929 Chondroitin AC/alginate lyase APT61_RS11230 722abe080de8556a3f32803f42715110 326 Gene3D G3DSA:1.50.10.110 5 325 3.2E-69 T 22-04-2016 IPR008397 Alginate lyase domain GO:0016829|GO:0042597 KEGG: 00051+4.2.2.3|MetaCyc: PWY-6986 APT61_RS12665 6285ac398de4f5de3ec43cbe502898d4 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 84 190 1.2E-9 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS12665 6285ac398de4f5de3ec43cbe502898d4 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 54 2.2E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS12665 6285ac398de4f5de3ec43cbe502898d4 199 SUPERFAMILY SSF46689 7 78 6.67E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS12665 6285ac398de4f5de3ec43cbe502898d4 199 PANTHER PTHR30055:SF20 1 194 5.7E-91 T 22-04-2016 APT61_RS12665 6285ac398de4f5de3ec43cbe502898d4 199 Gene3D G3DSA:1.10.357.10 8 194 5.0E-35 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS12665 6285ac398de4f5de3ec43cbe502898d4 199 SUPERFAMILY SSF48498 81 194 5.82E-22 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS12665 6285ac398de4f5de3ec43cbe502898d4 199 PANTHER PTHR30055 1 194 5.7E-91 T 22-04-2016 APT61_RS18425 567cba006808300b7a6358f5d1712ad2 220 SMART SM00947 30 192 8.6E-69 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS18425 567cba006808300b7a6358f5d1712ad2 220 Pfam PF00484 Carbonic anhydrase 38 187 1.1E-50 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS18425 567cba006808300b7a6358f5d1712ad2 220 PANTHER PTHR11002:SF23 1 207 2.4E-172 T 22-04-2016 APT61_RS18425 567cba006808300b7a6358f5d1712ad2 220 Gene3D G3DSA:3.40.1050.10 2 218 1.7E-76 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS18425 567cba006808300b7a6358f5d1712ad2 220 PANTHER PTHR11002 1 207 2.4E-172 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS18425 567cba006808300b7a6358f5d1712ad2 220 SUPERFAMILY SSF53056 1 213 1.31E-73 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS18425 567cba006808300b7a6358f5d1712ad2 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS18425 567cba006808300b7a6358f5d1712ad2 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 22-04-2016 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 APT61_RS19575 1fc13e189a8f7259764a7b6245a3d4c4 231 Pfam PF12840 Helix-turn-helix domain 20 74 8.6E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19575 1fc13e189a8f7259764a7b6245a3d4c4 231 Gene3D G3DSA:1.10.10.10 17 99 4.8E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19575 1fc13e189a8f7259764a7b6245a3d4c4 231 SMART SM00418 20 99 8.6E-13 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 APT61_RS19575 1fc13e189a8f7259764a7b6245a3d4c4 231 PANTHER PTHR39168 13 225 2.2E-42 T 22-04-2016 APT61_RS19575 1fc13e189a8f7259764a7b6245a3d4c4 231 SUPERFAMILY SSF46785 10 99 1.69E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19575 1fc13e189a8f7259764a7b6245a3d4c4 231 PANTHER PTHR39168:SF1 13 225 2.2E-42 T 22-04-2016 APT61_RS16800 2c289e0835accb21962acd15e96b14f5 164 SUPERFAMILY SSF55729 3 151 2.88E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS16800 2c289e0835accb21962acd15e96b14f5 164 PANTHER PTHR23091 1 150 9.5E-13 T 22-04-2016 APT61_RS16800 2c289e0835accb21962acd15e96b14f5 164 Gene3D G3DSA:3.40.630.30 2 153 1.1E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS16800 2c289e0835accb21962acd15e96b14f5 164 Pfam PF00583 Acetyltransferase (GNAT) family 71 145 1.9E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS05095 4d8cdff930c607872d75b8c37cb11494 319 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 6 319 1.2E-144 T 22-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APT61_RS05095 4d8cdff930c607872d75b8c37cb11494 319 Gene3D G3DSA:1.10.620.20 5 274 9.0E-90 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 APT61_RS05095 4d8cdff930c607872d75b8c37cb11494 319 Pfam PF00268 Ribonucleotide reductase, small chain 9 280 3.7E-84 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APT61_RS05095 4d8cdff930c607872d75b8c37cb11494 319 PIRSF PIRSF000355 1 316 1.9E-80 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APT61_RS05095 4d8cdff930c607872d75b8c37cb11494 319 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 97 113 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APT61_RS05095 4d8cdff930c607872d75b8c37cb11494 319 PANTHER PTHR23409 7 319 7.2E-108 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APT61_RS05095 4d8cdff930c607872d75b8c37cb11494 319 SUPERFAMILY SSF47240 6 319 1.55E-102 T 22-04-2016 IPR009078 Ferritin-like superfamily APT61_RS15220 dfa10e94e4c2e25baeb03412cced2c45 492 Gene3D G3DSA:3.30.450.90 85 213 7.8E-53 T 22-04-2016 APT61_RS15220 dfa10e94e4c2e25baeb03412cced2c45 492 Gene3D G3DSA:3.40.50.300 219 485 2.7E-99 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15220 dfa10e94e4c2e25baeb03412cced2c45 492 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 12 485 1.1E-206 T 22-04-2016 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 APT61_RS15220 dfa10e94e4c2e25baeb03412cced2c45 492 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 308 322 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APT61_RS15220 dfa10e94e4c2e25baeb03412cced2c45 492 SMART SM00382 241 383 4.2E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15220 dfa10e94e4c2e25baeb03412cced2c45 492 PANTHER PTHR30258 23 487 9.5E-250 T 22-04-2016 APT61_RS15220 dfa10e94e4c2e25baeb03412cced2c45 492 SUPERFAMILY SSF160246 12 67 9.68E-10 T 22-04-2016 APT61_RS15220 dfa10e94e4c2e25baeb03412cced2c45 492 Pfam PF00437 Type II/IV secretion system protein 116 380 6.0E-85 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APT61_RS15220 dfa10e94e4c2e25baeb03412cced2c45 492 SUPERFAMILY SSF52540 96 485 8.56E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15220 dfa10e94e4c2e25baeb03412cced2c45 492 PANTHER PTHR30258:SF9 23 487 9.5E-250 T 22-04-2016 APT61_RS03960 848de2752472a7df08d481c26dc8be99 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 2.1E-70 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APT61_RS03960 848de2752472a7df08d481c26dc8be99 197 Pfam PF01725 Ham1 family 4 192 3.5E-56 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APT61_RS03960 848de2752472a7df08d481c26dc8be99 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 51.235 T 22-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APT61_RS03960 848de2752472a7df08d481c26dc8be99 197 SUPERFAMILY SSF52972 1 195 1.02E-74 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APT61_RS03960 848de2752472a7df08d481c26dc8be99 197 PANTHER PTHR11067 1 196 7.9E-91 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 APT61_RS03960 848de2752472a7df08d481c26dc8be99 197 PANTHER PTHR11067:SF9 1 196 7.9E-91 T 22-04-2016 APT61_RS03960 848de2752472a7df08d481c26dc8be99 197 Gene3D G3DSA:3.90.950.10 1 195 3.3E-83 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APT61_RS01425 5d040ad3bf8ffe1aa095b00885ccc682 402 PANTHER PTHR23517 1 398 1.7E-180 T 22-04-2016 APT61_RS01425 5d040ad3bf8ffe1aa095b00885ccc682 402 SUPERFAMILY SSF103473 17 395 4.58E-47 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS01425 5d040ad3bf8ffe1aa095b00885ccc682 402 PANTHER PTHR23517:SF4 1 398 1.7E-180 T 22-04-2016 APT61_RS01425 5d040ad3bf8ffe1aa095b00885ccc682 402 Gene3D G3DSA:1.20.1250.20 219 397 3.6E-19 T 22-04-2016 APT61_RS01425 5d040ad3bf8ffe1aa095b00885ccc682 402 Gene3D G3DSA:1.20.1250.20 18 202 2.7E-20 T 22-04-2016 APT61_RS01425 5d040ad3bf8ffe1aa095b00885ccc682 402 Pfam PF07690 Major Facilitator Superfamily 24 305 1.0E-13 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS05345 63a5c5d8511ff70754ca161527c1606f 467 PANTHER PTHR30365:SF8 1 457 4.9E-282 T 22-04-2016 APT61_RS05345 63a5c5d8511ff70754ca161527c1606f 467 PIRSF PIRSF006446 2 459 1.1E-218 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 APT61_RS05345 63a5c5d8511ff70754ca161527c1606f 467 PANTHER PTHR30365 1 457 4.9E-282 T 22-04-2016 APT61_RS05345 63a5c5d8511ff70754ca161527c1606f 467 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 3.3E-164 T 22-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 APT61_RS19990 91cddc455e20383e359c509cc4a1e1c8 258 TIGRFAM TIGR03580 EF_0832: conserved hypothetical protein EF_0832/AHA_3913 2 258 4.4E-155 T 22-04-2016 IPR020042 Protein of unknown function DUF4311 APT61_RS19990 91cddc455e20383e359c509cc4a1e1c8 258 Pfam PF14188 Domain of unknown function (DUF4311) 25 237 7.2E-122 T 22-04-2016 IPR020042 Protein of unknown function DUF4311 APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 PANTHER PTHR24031:SF319 443 586 1.6E-218 T 22-04-2016 APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 PANTHER PTHR24031:SF319 233 367 1.6E-218 T 22-04-2016 APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 PANTHER PTHR24031:SF319 1 153 1.6E-218 T 22-04-2016 APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 PANTHER PTHR24031:SF319 172 208 1.6E-218 T 22-04-2016 APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 Gene3D G3DSA:3.40.50.300 3 155 1.9E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 SUPERFAMILY SSF52540 237 363 6.69E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 SUPERFAMILY SSF52540 50 169 6.69E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 SMART SM00490 262 345 1.2E-9 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 SMART SM00487 1 185 2.6E-19 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 Pfam PF04851 Type III restriction enzyme, res subunit 3 154 9.1E-25 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 Pfam PF00271 Helicase conserved C-terminal domain 241 343 2.0E-14 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 PANTHER PTHR24031 443 586 1.6E-218 T 22-04-2016 APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 PANTHER PTHR24031 233 367 1.6E-218 T 22-04-2016 APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 PANTHER PTHR24031 1 153 1.6E-218 T 22-04-2016 APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 PANTHER PTHR24031 172 208 1.6E-218 T 22-04-2016 APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 Gene3D G3DSA:3.40.50.300 237 355 2.7E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07105 aa0e78518c01244626d2a385be2719c8 586 SUPERFAMILY SSF57829 422 466 2.75E-7 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 APT61_RS20200 06f05a44b58b7f4fc239beabd70eb81c 211 Pfam PF08525 Opacity-associated protein A N-terminal motif 23 49 2.3E-7 T 22-04-2016 IPR013731 Opacity-associated protein A, N-terminal APT61_RS20200 06f05a44b58b7f4fc239beabd70eb81c 211 Pfam PF04225 Opacity-associated protein A LysM-like domain 126 211 3.1E-35 T 22-04-2016 IPR007340 Opacity-associated protein A APT61_RS21780 7175175ae58752dab131567a71b1e166 464 PANTHER PTHR11328 1 453 1.9E-177 T 22-04-2016 APT61_RS21780 7175175ae58752dab131567a71b1e166 464 Pfam PF13347 MFS/sugar transport protein 13 429 2.5E-100 T 22-04-2016 APT61_RS21780 7175175ae58752dab131567a71b1e166 464 PANTHER PTHR11328:SF24 1 453 1.9E-177 T 22-04-2016 APT61_RS21780 7175175ae58752dab131567a71b1e166 464 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 444 1.5E-150 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 APT61_RS21780 7175175ae58752dab131567a71b1e166 464 SUPERFAMILY SSF103473 13 420 5.23E-29 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS21780 7175175ae58752dab131567a71b1e166 464 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 62 87 - T 22-04-2016 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 APT61_RS21780 7175175ae58752dab131567a71b1e166 464 Gene3D G3DSA:1.20.1250.20 231 413 1.0E-5 T 22-04-2016 APT61_RS21780 7175175ae58752dab131567a71b1e166 464 Gene3D G3DSA:1.20.1250.20 23 208 9.3E-11 T 22-04-2016 APT61_RS10740 aab6c76d1c88842bc11ca69856f5d493 149 Pfam PF04657 Putative inner membrane exporter, YdcZ 6 143 6.1E-19 T 22-04-2016 IPR006750 Putative inner membrane exporter, YdcZ APT61_RS07990 2c9fb8a513ed4ef5772e466d6f3c7add 231 Pfam PF01966 HD domain 27 131 6.4E-12 T 22-04-2016 IPR006674 HD domain APT61_RS07990 2c9fb8a513ed4ef5772e466d6f3c7add 231 Gene3D G3DSA:1.10.3210.10 3 145 7.9E-43 T 22-04-2016 IPR006674 HD domain APT61_RS07990 2c9fb8a513ed4ef5772e466d6f3c7add 231 Gene3D G3DSA:1.10.3210.10 184 213 7.9E-43 T 22-04-2016 IPR006674 HD domain APT61_RS07990 2c9fb8a513ed4ef5772e466d6f3c7add 231 SUPERFAMILY SSF109604 1 215 4.71E-61 T 22-04-2016 APT61_RS07990 2c9fb8a513ed4ef5772e466d6f3c7add 231 PANTHER PTHR33594:SF1 1 225 1.7E-63 T 22-04-2016 APT61_RS07990 2c9fb8a513ed4ef5772e466d6f3c7add 231 SMART SM00471 22 141 1.3E-8 T 22-04-2016 IPR003607 HD/PDEase domain APT61_RS07990 2c9fb8a513ed4ef5772e466d6f3c7add 231 PANTHER PTHR33594 1 225 1.7E-63 T 22-04-2016 APT61_RS11185 3df4442bd212197ed57cd48d5fec31f5 404 Pfam PF07690 Major Facilitator Superfamily 18 276 1.5E-24 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS11185 3df4442bd212197ed57cd48d5fec31f5 404 Gene3D G3DSA:1.20.1250.20 221 394 1.1E-14 T 22-04-2016 APT61_RS11185 3df4442bd212197ed57cd48d5fec31f5 404 PANTHER PTHR23501:SF79 2 404 6.2E-138 T 22-04-2016 APT61_RS11185 3df4442bd212197ed57cd48d5fec31f5 404 PANTHER PTHR23501 2 404 6.2E-138 T 22-04-2016 APT61_RS11185 3df4442bd212197ed57cd48d5fec31f5 404 Gene3D G3DSA:1.20.1250.20 13 191 1.3E-18 T 22-04-2016 APT61_RS11185 3df4442bd212197ed57cd48d5fec31f5 404 SUPERFAMILY SSF103473 11 394 5.89E-48 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS10610 cfabc9f95d9808ce6e95e88c7ca3b19e 298 SUPERFAMILY SSF103481 191 287 1.11E-8 T 22-04-2016 APT61_RS10610 cfabc9f95d9808ce6e95e88c7ca3b19e 298 Pfam PF00892 EamA-like transporter family 4 134 1.2E-8 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS10610 cfabc9f95d9808ce6e95e88c7ca3b19e 298 Pfam PF00892 EamA-like transporter family 150 285 6.8E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS10610 cfabc9f95d9808ce6e95e88c7ca3b19e 298 PANTHER PTHR32322 1 284 5.6E-51 T 22-04-2016 APT61_RS10610 cfabc9f95d9808ce6e95e88c7ca3b19e 298 PANTHER PTHR32322:SF8 1 284 5.6E-51 T 22-04-2016 APT61_RS10610 cfabc9f95d9808ce6e95e88c7ca3b19e 298 SUPERFAMILY SSF103481 35 137 3.92E-13 T 22-04-2016 APT61_RS06305 dddf720a6a241c7249fbd14e81ce23cc 338 Gene3D G3DSA:3.40.190.10 177 301 4.7E-28 T 22-04-2016 APT61_RS06305 dddf720a6a241c7249fbd14e81ce23cc 338 Gene3D G3DSA:3.40.190.10 26 168 7.8E-43 T 22-04-2016 APT61_RS06305 dddf720a6a241c7249fbd14e81ce23cc 338 SUPERFAMILY SSF53850 24 332 1.36E-81 T 22-04-2016 APT61_RS06305 dddf720a6a241c7249fbd14e81ce23cc 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 15 332 7.0E-181 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 APT61_RS06305 dddf720a6a241c7249fbd14e81ce23cc 338 PANTHER PTHR30368 12 338 7.8E-256 T 22-04-2016 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 APT61_RS06305 dddf720a6a241c7249fbd14e81ce23cc 338 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 151 159 - T 22-04-2016 IPR000957 Sulphate/thiosulphate-binding, conserved site GO:0008271|GO:0008272|GO:0030288 APT61_RS06305 dddf720a6a241c7249fbd14e81ce23cc 338 Pfam PF13531 Bacterial extracellular solute-binding protein 38 286 2.5E-40 T 22-04-2016 APT61_RS06305 dddf720a6a241c7249fbd14e81ce23cc 338 PANTHER PTHR30368:SF1 12 338 7.8E-256 T 22-04-2016 APT61_RS07695 c66b38ab4e0c9bf7eb2e86257a259608 182 TIGRFAM TIGR04008 WcaF: colanic acid biosynthesis acetyltransferase WcaF 1 180 1.2E-117 T 22-04-2016 IPR024005 Colanic acid biosynthesis, acetyltransferase, WcaF KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.-|UniPathway: UPA00936 APT61_RS07695 c66b38ab4e0c9bf7eb2e86257a259608 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 157 2.7E-5 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS07695 c66b38ab4e0c9bf7eb2e86257a259608 182 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 73 101 0.24 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS07695 c66b38ab4e0c9bf7eb2e86257a259608 182 SUPERFAMILY SSF51161 20 180 1.05E-38 T 22-04-2016 IPR011004 Trimeric LpxA-like APT61_RS07695 c66b38ab4e0c9bf7eb2e86257a259608 182 PANTHER PTHR23416:SF36 1 182 4.3E-119 T 22-04-2016 APT61_RS07695 c66b38ab4e0c9bf7eb2e86257a259608 182 Gene3D G3DSA:2.160.10.10 22 180 9.8E-41 T 22-04-2016 APT61_RS07695 c66b38ab4e0c9bf7eb2e86257a259608 182 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 133 161 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 APT61_RS07695 c66b38ab4e0c9bf7eb2e86257a259608 182 PANTHER PTHR23416 1 182 4.3E-119 T 22-04-2016 APT61_RS20305 cecb3030696ca818bb7e772602eadb65 244 Gene3D G3DSA:3.30.1330.30 1 76 1.4E-27 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like APT61_RS20305 cecb3030696ca818bb7e772602eadb65 244 Pfam PF00588 SpoU rRNA Methylase family 96 236 1.1E-40 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APT61_RS20305 cecb3030696ca818bb7e772602eadb65 244 SUPERFAMILY SSF55315 2 76 7.3E-21 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like APT61_RS20305 cecb3030696ca818bb7e772602eadb65 244 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 1.6E-93 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 APT61_RS20305 cecb3030696ca818bb7e772602eadb65 244 PANTHER PTHR12029 3 243 3.2E-84 T 22-04-2016 APT61_RS20305 cecb3030696ca818bb7e772602eadb65 244 Gene3D G3DSA:3.40.1280.10 93 243 2.8E-54 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT61_RS20305 cecb3030696ca818bb7e772602eadb65 244 SMART SM00967 4 80 4.0E-21 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APT61_RS20305 cecb3030696ca818bb7e772602eadb65 244 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.24 T 22-04-2016 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB APT61_RS20305 cecb3030696ca818bb7e772602eadb65 244 SUPERFAMILY SSF75217 68 243 4.64E-49 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APT61_RS20305 cecb3030696ca818bb7e772602eadb65 244 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 77 2.4E-18 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 APT61_RS13050 89c770a446c83a2df760731e357058b3 252 Pfam PF04338 Protein of unknown function, DUF481 48 251 1.8E-56 T 22-04-2016 IPR007433 Protein of unknown function DUF481 APT61_RS14930 88294489235c5323246626c0b71012bc 60 Gene3D G3DSA:2.20.25.10 8 58 2.8E-23 T 22-04-2016 APT61_RS14930 88294489235c5323246626c0b71012bc 60 PANTHER PTHR33505 1 59 1.4E-25 T 22-04-2016 APT61_RS14930 88294489235c5323246626c0b71012bc 60 Pfam PF03966 Trm112p-like protein 2 41 3.5E-8 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 APT61_RS14930 88294489235c5323246626c0b71012bc 60 SUPERFAMILY SSF158997 1 54 3.53E-19 T 22-04-2016 APT61_RS14930 88294489235c5323246626c0b71012bc 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 25.814 T 22-04-2016 IPR005651 Uncharacterised protein family UPF0434/Trm112 APT61_RS21740 639efd1f7c7cbdd74c94b6f45ee103de 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.54 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS21740 639efd1f7c7cbdd74c94b6f45ee103de 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 5.7E-30 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS21740 639efd1f7c7cbdd74c94b6f45ee103de 91 SMART SM01409 8 61 8.2E-16 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS21740 639efd1f7c7cbdd74c94b6f45ee103de 91 Pfam PF01192 RNA polymerase Rpb6 10 59 7.7E-16 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS21740 639efd1f7c7cbdd74c94b6f45ee103de 91 SUPERFAMILY SSF63562 1 79 4.88E-25 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS21740 639efd1f7c7cbdd74c94b6f45ee103de 91 Gene3D G3DSA:3.90.940.10 1 78 6.9E-16 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS21740 639efd1f7c7cbdd74c94b6f45ee103de 91 PANTHER PTHR34476 2 91 4.8E-33 T 22-04-2016 APT61_RS14730 3afffd0572f309bf6f9435a79fb3cecf 137 PANTHER PTHR33303 1 136 1.0E-56 T 22-04-2016 APT61_RS14730 3afffd0572f309bf6f9435a79fb3cecf 137 SUPERFAMILY SSF51735 4 135 3.28E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS14730 3afffd0572f309bf6f9435a79fb3cecf 137 Pfam PF13380 CoA binding domain 14 130 4.5E-40 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APT61_RS14730 3afffd0572f309bf6f9435a79fb3cecf 137 Gene3D G3DSA:3.40.50.720 2 135 1.8E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS14730 3afffd0572f309bf6f9435a79fb3cecf 137 SMART SM00881 9 104 3.3E-25 T 22-04-2016 IPR003781 CoA-binding GO:0048037 APT61_RS16360 d5c922cadca7e79b6200e5b8560bd45e 246 Gene3D G3DSA:1.10.3720.10 23 238 2.9E-44 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS16360 d5c922cadca7e79b6200e5b8560bd45e 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 238 4.9E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS16360 d5c922cadca7e79b6200e5b8560bd45e 246 PANTHER PTHR30085 1 244 1.1E-159 T 22-04-2016 APT61_RS16360 d5c922cadca7e79b6200e5b8560bd45e 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 132 1.9E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APT61_RS16360 d5c922cadca7e79b6200e5b8560bd45e 246 PANTHER PTHR30085:SF4 1 244 1.1E-159 T 22-04-2016 IPR030202 Glutamate/aspartate transport system permease protein GltJ/AatQ GO:0006865|GO:0016021|GO:0043190 APT61_RS16360 d5c922cadca7e79b6200e5b8560bd45e 246 SUPERFAMILY SSF161098 24 223 6.41E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS19450 fb817b165c2538d143982c12cf020885 290 SUPERFAMILY SSF53448 4 289 2.33E-97 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS19450 fb817b165c2538d143982c12cf020885 290 Gene3D G3DSA:3.90.550.10 4 266 1.3E-69 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS19450 fb817b165c2538d143982c12cf020885 290 PANTHER PTHR22572:SF105 5 272 1.6E-192 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APT61_RS19450 fb817b165c2538d143982c12cf020885 290 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 5 290 1.8E-163 T 22-04-2016 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APT61_RS19450 fb817b165c2538d143982c12cf020885 290 PANTHER PTHR22572 5 272 1.6E-192 T 22-04-2016 APT61_RS19450 fb817b165c2538d143982c12cf020885 290 Pfam PF00483 Nucleotidyl transferase 5 241 1.6E-73 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APT61_RS09485 237e6aa4bcc4cf298cae12b6e6684de8 269 Pfam PF00290 Tryptophan synthase alpha chain 8 266 7.9E-101 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APT61_RS09485 237e6aa4bcc4cf298cae12b6e6684de8 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APT61_RS09485 237e6aa4bcc4cf298cae12b6e6684de8 269 Gene3D G3DSA:3.20.20.70 1 267 2.8E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS09485 237e6aa4bcc4cf298cae12b6e6684de8 269 PANTHER PTHR10314 1 51 1.6E-30 T 22-04-2016 APT61_RS09485 237e6aa4bcc4cf298cae12b6e6684de8 269 PANTHER PTHR10314 74 153 1.6E-30 T 22-04-2016 APT61_RS09485 237e6aa4bcc4cf298cae12b6e6684de8 269 SUPERFAMILY SSF51366 1 266 1.7E-92 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APT61_RS09485 237e6aa4bcc4cf298cae12b6e6684de8 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 39.002 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APT61_RS09485 237e6aa4bcc4cf298cae12b6e6684de8 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 1.1E-109 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 APT61_RS09485 237e6aa4bcc4cf298cae12b6e6684de8 269 PANTHER PTHR10314:SF4 1 51 1.6E-30 T 22-04-2016 APT61_RS09485 237e6aa4bcc4cf298cae12b6e6684de8 269 PANTHER PTHR10314:SF4 74 153 1.6E-30 T 22-04-2016 APT61_RS09635 5adac9db1083f84cbdfa1c525d5e25f7 262 SUPERFAMILY SSF51735 6 253 5.48E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS09635 5adac9db1083f84cbdfa1c525d5e25f7 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 3.7E-84 T 22-04-2016 APT61_RS09635 5adac9db1083f84cbdfa1c525d5e25f7 262 PIRSF PIRSF000094 1 260 5.4E-125 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APT61_RS09635 5adac9db1083f84cbdfa1c525d5e25f7 262 Gene3D G3DSA:3.40.50.720 2 253 1.3E-61 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS09635 5adac9db1083f84cbdfa1c525d5e25f7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09635 5adac9db1083f84cbdfa1c525d5e25f7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 8.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09635 5adac9db1083f84cbdfa1c525d5e25f7 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 8.3E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09635 5adac9db1083f84cbdfa1c525d5e25f7 262 PANTHER PTHR24322 159 191 1.5E-66 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09635 5adac9db1083f84cbdfa1c525d5e25f7 262 PANTHER PTHR24322 11 143 1.5E-66 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09635 5adac9db1083f84cbdfa1c525d5e25f7 262 PANTHER PTHR24322:SF317 159 191 1.5E-66 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APT61_RS09635 5adac9db1083f84cbdfa1c525d5e25f7 262 PANTHER PTHR24322:SF317 11 143 1.5E-66 T 22-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APT61_RS10310 96dcc4b8f67f90901adc508c8d8bd67c 305 Gene3D G3DSA:3.40.190.10 187 269 7.1E-24 T 22-04-2016 APT61_RS10310 96dcc4b8f67f90901adc508c8d8bd67c 305 SUPERFAMILY SSF53850 99 304 4.81E-45 T 22-04-2016 APT61_RS10310 96dcc4b8f67f90901adc508c8d8bd67c 305 Pfam PF03466 LysR substrate binding domain 97 301 2.3E-42 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS10310 96dcc4b8f67f90901adc508c8d8bd67c 305 PANTHER PTHR30537 5 305 7.1E-104 T 22-04-2016 APT61_RS10310 96dcc4b8f67f90901adc508c8d8bd67c 305 SUPERFAMILY SSF46785 13 95 1.95E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10310 96dcc4b8f67f90901adc508c8d8bd67c 305 Gene3D G3DSA:3.40.190.10 101 186 3.4E-23 T 22-04-2016 APT61_RS10310 96dcc4b8f67f90901adc508c8d8bd67c 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 15 72 1.4E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10310 96dcc4b8f67f90901adc508c8d8bd67c 305 Gene3D G3DSA:1.10.10.10 12 90 2.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10310 96dcc4b8f67f90901adc508c8d8bd67c 305 PANTHER PTHR30537:SF5 5 305 7.1E-104 T 22-04-2016 APT61_RS12075 10d862aaa0e0b1b60221b10ad7778433 318 SMART SM00829 12 311 0.0025 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APT61_RS12075 10d862aaa0e0b1b60221b10ad7778433 318 Gene3D G3DSA:3.90.180.10 3 140 7.5E-21 T 22-04-2016 IPR011032 GroES-like APT61_RS12075 10d862aaa0e0b1b60221b10ad7778433 318 SUPERFAMILY SSF51735 118 278 3.12E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS12075 10d862aaa0e0b1b60221b10ad7778433 318 PANTHER PTHR11695 18 311 1.2E-40 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS12075 10d862aaa0e0b1b60221b10ad7778433 318 Gene3D G3DSA:3.40.50.720 141 279 3.4E-17 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS12075 10d862aaa0e0b1b60221b10ad7778433 318 SUPERFAMILY SSF50129 4 120 6.29E-20 T 22-04-2016 IPR011032 GroES-like APT61_RS12075 10d862aaa0e0b1b60221b10ad7778433 318 PANTHER PTHR11695:SF5 18 311 1.2E-40 T 22-04-2016 APT61_RS14555 cf5f615b3a5e9851deb355900975a6bc 381 ProSitePatterns PS00336 Beta-lactamase class-C active site. 80 87 - T 22-04-2016 IPR001586 Beta-lactamase, class-C active site GO:0008800|GO:0017001|GO:0030288 KEGG: 00311+3.5.2.6 APT61_RS14555 cf5f615b3a5e9851deb355900975a6bc 381 PANTHER PTHR22935 24 309 9.3E-63 T 22-04-2016 APT61_RS14555 cf5f615b3a5e9851deb355900975a6bc 381 Gene3D G3DSA:3.40.710.10 30 380 7.6E-86 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS14555 cf5f615b3a5e9851deb355900975a6bc 381 PANTHER PTHR22935 325 381 9.3E-63 T 22-04-2016 APT61_RS14555 cf5f615b3a5e9851deb355900975a6bc 381 SUPERFAMILY SSF56601 27 380 7.17E-98 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS14555 cf5f615b3a5e9851deb355900975a6bc 381 PANTHER PTHR22935:SF64 24 309 9.3E-63 T 22-04-2016 APT61_RS14555 cf5f615b3a5e9851deb355900975a6bc 381 PANTHER PTHR22935:SF64 325 381 9.3E-63 T 22-04-2016 APT61_RS14555 cf5f615b3a5e9851deb355900975a6bc 381 Pfam PF00144 Beta-lactamase 35 380 1.1E-81 T 22-04-2016 IPR001466 Beta-lactamase-related APT61_RS12875 b0b8f0992f7b2c46578601cff33ce45c 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 5.9E-25 T 22-04-2016 IPR006817 Lipoprotein leucine-zipper GO:0019867 APT61_RS12875 b0b8f0992f7b2c46578601cff33ce45c 78 PANTHER PTHR38763 1 78 2.5E-29 T 22-04-2016 APT61_RS12875 b0b8f0992f7b2c46578601cff33ce45c 78 PIRSF PIRSF002855 1 78 1.5E-29 T 22-04-2016 IPR016367 Murein-lipoprotein APT61_RS12875 b0b8f0992f7b2c46578601cff33ce45c 78 SUPERFAMILY SSF58042 24 74 4.58E-23 T 22-04-2016 APT61_RS12875 b0b8f0992f7b2c46578601cff33ce45c 78 Gene3D G3DSA:1.20.5.190 22 73 1.9E-24 T 22-04-2016 APT61_RS10200 478d3054fc9e5f024f544ef23a3dd135 220 Pfam PF06551 Protein of unknown function (DUF1120) 25 128 3.1E-24 T 22-04-2016 IPR010546 Protein of unknown function DUF1120 APT61_RS03160 b0115c4b1073816163c1d4f269205aca 181 PANTHER PTHR33169:SF2 23 181 4.1E-42 T 22-04-2016 APT61_RS03160 b0115c4b1073816163c1d4f269205aca 181 Gene3D G3DSA:1.10.10.10 25 125 1.0E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03160 b0115c4b1073816163c1d4f269205aca 181 SUPERFAMILY SSF46785 25 124 5.72E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03160 b0115c4b1073816163c1d4f269205aca 181 Pfam PF03551 Transcriptional regulator PadR-like family 41 110 1.1E-15 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal APT61_RS03160 b0115c4b1073816163c1d4f269205aca 181 PANTHER PTHR33169 23 181 4.1E-42 T 22-04-2016 APT61_RS14585 64957d6a637d57deca450726183db0a2 146 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS14585 64957d6a637d57deca450726183db0a2 146 PANTHER PTHR30505 1 146 2.2E-49 T 22-04-2016 APT61_RS14585 64957d6a637d57deca450726183db0a2 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 145 2.5E-33 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS14585 64957d6a637d57deca450726183db0a2 146 PANTHER PTHR30505:SF3 1 146 2.2E-49 T 22-04-2016 APT61_RS14585 64957d6a637d57deca450726183db0a2 146 SUPERFAMILY SSF55804 1 145 4.32E-37 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APT61_RS14585 64957d6a637d57deca450726183db0a2 146 Gene3D G3DSA:3.40.930.10 1 145 4.8E-50 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 296 307 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 181 677 8.6E-141 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 PANTHER PTHR22931:SF24 165 662 0.0 T 22-04-2016 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 Gene3D G3DSA:3.20.20.60 370 680 3.7E-102 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 363 653 2.7E-112 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 Gene3D G3DSA:1.10.274.10 148 244 4.8E-17 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 559 577 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 Gene3D G3DSA:3.50.30.10 245 365 2.1E-29 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 SUPERFAMILY SSF55594 5 89 2.36E-16 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 Pfam PF00391 PEP-utilising enzyme, mobile domain 264 337 3.8E-14 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 559 574 3.3E-20 T 22-04-2016 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 576 591 3.3E-20 T 22-04-2016 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 624 3.3E-20 T 22-04-2016 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 405 424 3.3E-20 T 22-04-2016 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 Pfam PF05524 PEP-utilising enzyme, N-terminal 125 237 1.3E-9 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 Pfam PF00381 PTS HPr component phosphorylation site 6 84 2.3E-11 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 689 829 3.4E-30 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 Gene3D G3DSA:3.40.930.10 688 830 3.3E-40 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 22-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 Gene3D G3DSA:3.30.1340.10 6 89 3.1E-20 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 SUPERFAMILY SSF55804 688 828 2.22E-29 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 PANTHER PTHR22931 165 662 0.0 T 22-04-2016 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 SUPERFAMILY SSF51621 368 661 1.57E-96 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 SUPERFAMILY SSF47831 147 254 7.72E-18 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 APT61_RS00630 179a5591b616fd0c200fb4e1969a44c9 833 SUPERFAMILY SSF52009 236 355 1.44E-23 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 APT61_RS14100 073ba36eef5bc4bf0fee0f85541a375c 95 SUPERFAMILY SSF101498 13 88 1.01E-13 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 APT61_RS14100 073ba36eef5bc4bf0fee0f85541a375c 95 Pfam PF04316 Anti-sigma-28 factor, FlgM 40 87 3.2E-10 T 22-04-2016 IPR031316 Anti-sigma-28 factor FlgM, C-terminal APT61_RS14100 073ba36eef5bc4bf0fee0f85541a375c 95 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 90 1.4E-20 T 22-04-2016 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 APT61_RS20975 23eb0c33a29029cdce58679e78e999bf 435 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 32 431 0.0 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS20975 23eb0c33a29029cdce58679e78e999bf 435 Hamap MF_01301 Maltoporin [lamB]. 4 435 43.094 T 22-04-2016 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 APT61_RS20975 23eb0c33a29029cdce58679e78e999bf 435 Gene3D G3DSA:2.40.170.10 26 435 1.5E-168 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS20975 23eb0c33a29029cdce58679e78e999bf 435 SUPERFAMILY SSF56935 26 435 5.86E-148 T 22-04-2016 APT61_RS20975 23eb0c33a29029cdce58679e78e999bf 435 PANTHER PTHR38762 2 435 7.7E-190 T 22-04-2016 APT61_RS20975 23eb0c33a29029cdce58679e78e999bf 435 Pfam PF02264 LamB porin 28 435 2.9E-146 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS18195 aec0e2724125310c3d57be0125321675 382 Gene3D G3DSA:3.40.50.2000 172 357 1.6E-6 T 22-04-2016 APT61_RS18195 aec0e2724125310c3d57be0125321675 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 382 43.095 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 APT61_RS18195 aec0e2724125310c3d57be0125321675 382 PANTHER PTHR30372 1 380 2.4E-145 T 22-04-2016 APT61_RS18195 aec0e2724125310c3d57be0125321675 382 Pfam PF02684 Lipid-A-disaccharide synthetase 9 377 7.0E-153 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 APT61_RS18195 aec0e2724125310c3d57be0125321675 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 380 5.1E-186 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 APT61_RS18195 aec0e2724125310c3d57be0125321675 382 SUPERFAMILY SSF53756 9 362 3.68E-28 T 22-04-2016 APT61_RS18195 aec0e2724125310c3d57be0125321675 382 PANTHER PTHR30372:SF0 1 380 2.4E-145 T 22-04-2016 APT61_RS14025 60bc7d15303a82772e7abbbb8bf06c1e 1058 PANTHER PTHR30001:SF1 1 844 0.0 T 22-04-2016 APT61_RS14025 60bc7d15303a82772e7abbbb8bf06c1e 1058 PANTHER PTHR30001 1 844 0.0 T 22-04-2016 APT61_RS14025 60bc7d15303a82772e7abbbb8bf06c1e 1058 Hamap MF_00970 Ribonuclease E [rne]. 1 1044 38.965 T 22-04-2016 IPR028878 Ribonuclease E GO:0006396|GO:0008995 APT61_RS14025 60bc7d15303a82772e7abbbb8bf06c1e 1058 SMART SM00316 37 119 7.0E-12 T 22-04-2016 IPR022967 RNA-binding domain, S1 APT61_RS14025 60bc7d15303a82772e7abbbb8bf06c1e 1058 Pfam PF10150 Ribonuclease E/G family 121 391 4.4E-93 T 22-04-2016 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 APT61_RS14025 60bc7d15303a82772e7abbbb8bf06c1e 1058 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 5.2E-171 T 22-04-2016 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 APT61_RS14025 60bc7d15303a82772e7abbbb8bf06c1e 1058 Gene3D G3DSA:2.40.50.140 31 124 3.7E-36 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14025 60bc7d15303a82772e7abbbb8bf06c1e 1058 Pfam PF00575 S1 RNA binding domain 36 118 3.5E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 APT61_RS14025 60bc7d15303a82772e7abbbb8bf06c1e 1058 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1019 1055 1.9E-19 T 22-04-2016 IPR021968 Polyribonucleotide phosphorylase C-terminal APT61_RS14025 60bc7d15303a82772e7abbbb8bf06c1e 1058 SUPERFAMILY SSF50249 40 124 1.72E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS12015 b8e5018f2b4f6f7422187b6a7d75a65e 436 SUPERFAMILY SSF81340 5 426 1.06E-85 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APT61_RS12015 b8e5018f2b4f6f7422187b6a7d75a65e 436 PRINTS PR00762 Chloride channel signature 166 185 3.3E-20 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS12015 b8e5018f2b4f6f7422187b6a7d75a65e 436 PRINTS PR00762 Chloride channel signature 382 401 3.3E-20 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS12015 b8e5018f2b4f6f7422187b6a7d75a65e 436 PRINTS PR00762 Chloride channel signature 330 350 3.3E-20 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS12015 b8e5018f2b4f6f7422187b6a7d75a65e 436 PRINTS PR00762 Chloride channel signature 116 135 3.3E-20 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS12015 b8e5018f2b4f6f7422187b6a7d75a65e 436 PRINTS PR00762 Chloride channel signature 364 380 3.3E-20 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS12015 b8e5018f2b4f6f7422187b6a7d75a65e 436 Pfam PF00654 Voltage gated chloride channel 77 414 7.4E-70 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 APT61_RS12015 b8e5018f2b4f6f7422187b6a7d75a65e 436 Gene3D G3DSA:1.10.3080.10 11 427 2.8E-70 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 APT61_RS12015 b8e5018f2b4f6f7422187b6a7d75a65e 436 PANTHER PTHR11689 10 422 3.5E-63 T 22-04-2016 APT61_RS15185 e7bf9226143d5b077e93e88aa7560ba0 381 Pfam PF05134 Type II secretion system (T2SS), protein L 5 224 1.3E-33 T 22-04-2016 IPR024230 GspL, cytoplasmic actin-ATPase-like domain APT61_RS15185 e7bf9226143d5b077e93e88aa7560ba0 381 SUPERFAMILY SSF53067 3 139 2.46E-25 T 22-04-2016 APT61_RS15185 e7bf9226143d5b077e93e88aa7560ba0 381 Pfam PF12693 GspL periplasmic domain 241 367 3.0E-10 T 22-04-2016 IPR025691 GspL periplasmic domain APT61_RS15185 e7bf9226143d5b077e93e88aa7560ba0 381 PIRSF PIRSF015761 15 367 1.4E-15 T 22-04-2016 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 APT61_RS00210 5b376368dc20cd78ffb37f23daa46ed2 413 PANTHER PTHR15108 1 406 8.8E-103 T 22-04-2016 APT61_RS00210 5b376368dc20cd78ffb37f23daa46ed2 413 Hamap MF_00998 Sulfoquinovose isomerase. 1 413 86.743 T 22-04-2016 IPR030875 Sulfoquinovose isomerase GO:0061593 MetaCyc: PWY-7446 APT61_RS00210 5b376368dc20cd78ffb37f23daa46ed2 413 SUPERFAMILY SSF48208 3 407 2.89E-116 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APT61_RS00210 5b376368dc20cd78ffb37f23daa46ed2 413 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 32 387 1.4E-126 T 22-04-2016 APT61_RS00210 5b376368dc20cd78ffb37f23daa46ed2 413 Gene3D G3DSA:1.50.10.10 2 395 2.3E-99 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APT61_RS01875 9366888fba8a213afc185b8339b07876 200 Pfam PF02661 Fic/DOC family 58 152 2.4E-15 T 22-04-2016 IPR003812 Fido domain APT61_RS01875 9366888fba8a213afc185b8339b07876 200 PANTHER PTHR39560:SF1 1 200 1.2E-58 T 22-04-2016 APT61_RS01875 9366888fba8a213afc185b8339b07876 200 SUPERFAMILY SSF140931 41 196 2.35E-30 T 22-04-2016 IPR003812 Fido domain APT61_RS01875 9366888fba8a213afc185b8339b07876 200 PANTHER PTHR39560 1 200 1.2E-58 T 22-04-2016 APT61_RS01875 9366888fba8a213afc185b8339b07876 200 Gene3D G3DSA:1.10.3290.10 11 198 1.7E-52 T 22-04-2016 IPR003812 Fido domain APT61_RS16815 edbf5a11b0f8ac8265f8a9ecf5e9b203 354 SUPERFAMILY SSF111369 38 276 3.53E-54 T 22-04-2016 APT61_RS16815 edbf5a11b0f8ac8265f8a9ecf5e9b203 354 PANTHER PTHR30158 15 353 3.1E-86 T 22-04-2016 APT61_RS16815 edbf5a11b0f8ac8265f8a9ecf5e9b203 354 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 48 268 1.2E-15 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT61_RS16815 edbf5a11b0f8ac8265f8a9ecf5e9b203 354 Gene3D G3DSA:2.40.50.100 49 82 1.1E-20 T 22-04-2016 APT61_RS16815 edbf5a11b0f8ac8265f8a9ecf5e9b203 354 Gene3D G3DSA:2.40.50.100 157 188 1.1E-20 T 22-04-2016 APT61_RS16815 edbf5a11b0f8ac8265f8a9ecf5e9b203 354 Gene3D G3DSA:1.20.1600.10 89 155 8.6E-5 T 22-04-2016 APT61_RS16815 edbf5a11b0f8ac8265f8a9ecf5e9b203 354 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 24 352 7.2E-80 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APT61_RS09745 00984edeb844f38986ee239e2421ee02 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.6E-22 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS09745 00984edeb844f38986ee239e2421ee02 336 PANTHER PTHR30146:SF30 1 317 1.7E-111 T 22-04-2016 APT61_RS09745 00984edeb844f38986ee239e2421ee02 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS09745 00984edeb844f38986ee239e2421ee02 336 Gene3D G3DSA:1.10.260.40 2 51 5.1E-26 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS09745 00984edeb844f38986ee239e2421ee02 336 PANTHER PTHR30146 1 317 1.7E-111 T 22-04-2016 APT61_RS09745 00984edeb844f38986ee239e2421ee02 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 9.2E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS09745 00984edeb844f38986ee239e2421ee02 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 9.2E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS09745 00984edeb844f38986ee239e2421ee02 336 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 77 316 7.8E-18 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APT61_RS09745 00984edeb844f38986ee239e2421ee02 336 Gene3D G3DSA:3.40.50.2300 180 317 6.7E-31 T 22-04-2016 APT61_RS09745 00984edeb844f38986ee239e2421ee02 336 SUPERFAMILY SSF53822 75 332 3.81E-54 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS09745 00984edeb844f38986ee239e2421ee02 336 SUPERFAMILY SSF47413 2 57 3.75E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS09745 00984edeb844f38986ee239e2421ee02 336 Gene3D G3DSA:3.40.50.2300 52 179 1.9E-30 T 22-04-2016 APT61_RS09745 00984edeb844f38986ee239e2421ee02 336 SMART SM00354 2 72 2.3E-34 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS04140 8617f1e3ae03f0be41bfb9c455824acc 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site APT61_RS04140 8617f1e3ae03f0be41bfb9c455824acc 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 2.8E-59 T 22-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 APT61_RS04140 8617f1e3ae03f0be41bfb9c455824acc 129 PANTHER PTHR11715:SF12 1 129 3.6E-74 T 22-04-2016 APT61_RS04140 8617f1e3ae03f0be41bfb9c455824acc 129 SUPERFAMILY SSF51230 4 128 1.48E-45 T 22-04-2016 IPR011053 Single hybrid motif APT61_RS04140 8617f1e3ae03f0be41bfb9c455824acc 129 Gene3D G3DSA:2.40.50.100 7 128 2.7E-51 T 22-04-2016 APT61_RS04140 8617f1e3ae03f0be41bfb9c455824acc 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 31.915 T 22-04-2016 IPR002930 Glycine cleavage system H-protein APT61_RS04140 8617f1e3ae03f0be41bfb9c455824acc 129 Pfam PF01597 Glycine cleavage H-protein 8 128 1.9E-49 T 22-04-2016 IPR002930 Glycine cleavage system H-protein APT61_RS04140 8617f1e3ae03f0be41bfb9c455824acc 129 PANTHER PTHR11715 1 129 3.6E-74 T 22-04-2016 IPR002930 Glycine cleavage system H-protein APT61_RS01505 7cfcc658d1d286bf0709f8078cf80a3a 371 Pfam PF13458 Periplasmic binding protein 30 348 9.3E-59 T 22-04-2016 IPR028081 Leucine-binding protein domain APT61_RS01505 7cfcc658d1d286bf0709f8078cf80a3a 371 SUPERFAMILY SSF53822 29 362 2.83E-87 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS01505 7cfcc658d1d286bf0709f8078cf80a3a 371 PANTHER PTHR30483 1 361 5.6E-223 T 22-04-2016 APT61_RS01505 7cfcc658d1d286bf0709f8078cf80a3a 371 Gene3D G3DSA:3.40.50.2300 29 228 5.9E-67 T 22-04-2016 APT61_RS01505 7cfcc658d1d286bf0709f8078cf80a3a 371 PANTHER PTHR30483:SF16 1 361 5.6E-223 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01505 7cfcc658d1d286bf0709f8078cf80a3a 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 5.5E-69 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01505 7cfcc658d1d286bf0709f8078cf80a3a 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 71 89 5.5E-69 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01505 7cfcc658d1d286bf0709f8078cf80a3a 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 331 346 5.5E-69 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01505 7cfcc658d1d286bf0709f8078cf80a3a 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 281 294 5.5E-69 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01505 7cfcc658d1d286bf0709f8078cf80a3a 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 258 276 5.5E-69 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01505 7cfcc658d1d286bf0709f8078cf80a3a 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 5.5E-69 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS01505 7cfcc658d1d286bf0709f8078cf80a3a 371 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 92 102 5.5E-69 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS10325 2d6ab7c8262dfb6e058a4a6cabd67cab 251 Gene3D G3DSA:3.40.30.10 109 248 4.5E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS10325 2d6ab7c8262dfb6e058a4a6cabd67cab 251 PANTHER PTHR35272:SF2 1 248 2.2E-90 T 22-04-2016 APT61_RS10325 2d6ab7c8262dfb6e058a4a6cabd67cab 251 PANTHER PTHR35272 1 248 2.2E-90 T 22-04-2016 APT61_RS10325 2d6ab7c8262dfb6e058a4a6cabd67cab 251 SUPERFAMILY SSF52833 92 248 1.01E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS10325 2d6ab7c8262dfb6e058a4a6cabd67cab 251 Gene3D G3DSA:3.10.450.70 60 82 2.8E-4 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal APT61_RS10325 2d6ab7c8262dfb6e058a4a6cabd67cab 251 Pfam PF13098 Thioredoxin-like domain 116 247 1.1E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS10325 2d6ab7c8262dfb6e058a4a6cabd67cab 251 SUPERFAMILY SSF54423 22 80 1.83E-20 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal APT61_RS20735 df27031419980838c7b3b2b0192882a1 313 SUPERFAMILY SSF53822 9 307 4.38E-79 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS20735 df27031419980838c7b3b2b0192882a1 313 Gene3D G3DSA:3.40.50.2300 29 146 7.5E-38 T 22-04-2016 APT61_RS20735 df27031419980838c7b3b2b0192882a1 313 Gene3D G3DSA:3.40.50.2300 147 307 3.0E-47 T 22-04-2016 APT61_RS20735 df27031419980838c7b3b2b0192882a1 313 PANTHER PTHR32196:SF41 19 304 1.6E-144 T 22-04-2016 APT61_RS20735 df27031419980838c7b3b2b0192882a1 313 Pfam PF13407 Periplasmic binding protein domain 30 285 4.8E-55 T 22-04-2016 IPR025997 Periplasmic binding protein APT61_RS20735 df27031419980838c7b3b2b0192882a1 313 PANTHER PTHR32196 19 304 1.6E-144 T 22-04-2016 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 Gene3D G3DSA:3.30.420.40 208 398 9.1E-73 T 22-04-2016 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 PIRSF PIRSF000722 2 400 1.2E-143 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 PANTHER PTHR21060 2 398 8.8E-282 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 Gene3D G3DSA:3.30.420.40 5 207 1.3E-9 T 22-04-2016 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 PANTHER PTHR21060:SF15 2 398 8.8E-282 T 22-04-2016 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 SUPERFAMILY SSF53067 4 199 9.71E-63 T 22-04-2016 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 PRINTS PR00471 Acetate kinase family signature 302 315 4.0E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 PRINTS PR00471 Acetate kinase family signature 380 392 4.0E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 PRINTS PR00471 Acetate kinase family signature 206 227 4.0E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 PRINTS PR00471 Acetate kinase family signature 325 341 4.0E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 PRINTS PR00471 Acetate kinase family signature 6 17 4.0E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 PRINTS PR00471 Acetate kinase family signature 176 189 4.0E-48 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 Pfam PF00871 Acetokinase family 6 393 2.6E-176 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 185.155 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 SUPERFAMILY SSF53067 160 398 1.48E-83 T 22-04-2016 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 3.8E-186 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS06790 752566fba407e7dafb4c5581530d91ec 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 APT61_RS07890 9cc6792b6943897e2c9736ac1b7426ab 157 Gene3D G3DSA:3.20.80.10 1 153 8.2E-47 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain APT61_RS07890 9cc6792b6943897e2c9736ac1b7426ab 157 PANTHER PTHR40055 1 156 3.1E-90 T 22-04-2016 APT61_RS07890 9cc6792b6943897e2c9736ac1b7426ab 157 Pfam PF06445 GyrI-like small molecule binding domain 1 152 1.1E-24 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain APT61_RS07890 9cc6792b6943897e2c9736ac1b7426ab 157 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 155 39.381 T 22-04-2016 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 APT61_RS07890 9cc6792b6943897e2c9736ac1b7426ab 157 SUPERFAMILY SSF55136 1 153 2.27E-37 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain APT61_RS07890 9cc6792b6943897e2c9736ac1b7426ab 157 PANTHER PTHR40055:SF2 1 156 3.1E-90 T 22-04-2016 APT61_RS07890 9cc6792b6943897e2c9736ac1b7426ab 157 SMART SM00871 1 153 2.7E-28 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding APT61_RS09125 48bb00ac328cdf743f097fff0fba8892 326 Gene3D G3DSA:1.10.10.60 267 316 2.2E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS09125 48bb00ac328cdf743f097fff0fba8892 326 Gene3D G3DSA:3.40.50.880 6 194 8.3E-48 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS09125 48bb00ac328cdf743f097fff0fba8892 326 SMART SM00342 229 312 2.0E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS09125 48bb00ac328cdf743f097fff0fba8892 326 PANTHER PTHR11019:SF68 6 320 4.5E-109 T 22-04-2016 APT61_RS09125 48bb00ac328cdf743f097fff0fba8892 326 SUPERFAMILY SSF46689 213 263 6.97E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS09125 48bb00ac328cdf743f097fff0fba8892 326 SUPERFAMILY SSF52317 6 194 4.59E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS09125 48bb00ac328cdf743f097fff0fba8892 326 Gene3D G3DSA:1.10.10.60 211 266 2.2E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS09125 48bb00ac328cdf743f097fff0fba8892 326 Pfam PF12833 Helix-turn-helix domain 235 313 2.3E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS09125 48bb00ac328cdf743f097fff0fba8892 326 PANTHER PTHR11019 6 320 4.5E-109 T 22-04-2016 APT61_RS09125 48bb00ac328cdf743f097fff0fba8892 326 Pfam PF01965 DJ-1/PfpI family 37 173 2.1E-14 T 22-04-2016 IPR002818 DJ-1/PfpI APT61_RS09125 48bb00ac328cdf743f097fff0fba8892 326 SUPERFAMILY SSF46689 266 316 1.94E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS01370 52b6ca8ebb315c9cbe21d118ff878c65 140 Pfam PF13279 Thioesterase-like superfamily 15 122 8.4E-13 T 22-04-2016 APT61_RS01370 52b6ca8ebb315c9cbe21d118ff878c65 140 PIRSF PIRSF003230 3 135 5.5E-21 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 APT61_RS01370 52b6ca8ebb315c9cbe21d118ff878c65 140 SUPERFAMILY SSF54637 7 131 2.17E-32 T 22-04-2016 IPR029069 HotDog domain APT61_RS01370 52b6ca8ebb315c9cbe21d118ff878c65 140 PANTHER PTHR31793 10 132 8.5E-31 T 22-04-2016 APT61_RS01370 52b6ca8ebb315c9cbe21d118ff878c65 140 Gene3D G3DSA:3.10.129.10 8 128 2.3E-35 T 22-04-2016 IPR029069 HotDog domain APT61_RS01370 52b6ca8ebb315c9cbe21d118ff878c65 140 PANTHER PTHR31793:SF9 10 132 8.5E-31 T 22-04-2016 APT61_RS08770 2438b21594d2be1ec72263acfe9ba76f 69 SUPERFAMILY SSF50249 3 68 3.26E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS08770 2438b21594d2be1ec72263acfe9ba76f 69 PIRSF PIRSF002599 1 69 7.1E-26 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APT61_RS08770 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS08770 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS08770 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS08770 2438b21594d2be1ec72263acfe9ba76f 69 SMART SM00357 5 69 9.3E-31 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APT61_RS08770 2438b21594d2be1ec72263acfe9ba76f 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 2.9E-33 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS08770 2438b21594d2be1ec72263acfe9ba76f 69 PANTHER PTHR11544:SF53 1 69 1.1E-48 T 22-04-2016 APT61_RS08770 2438b21594d2be1ec72263acfe9ba76f 69 PANTHER PTHR11544 1 69 1.1E-48 T 22-04-2016 APT61_RS08770 2438b21594d2be1ec72263acfe9ba76f 69 Gene3D G3DSA:2.40.50.140 4 67 2.7E-32 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS08770 2438b21594d2be1ec72263acfe9ba76f 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 22-04-2016 IPR019844 Cold-shock conserved site APT61_RS06890 0e8d78bec392e7aab3df4c0f28968bb5 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.789 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 APT61_RS06890 0e8d78bec392e7aab3df4c0f28968bb5 485 PANTHER PTHR22773 1 485 7.2E-204 T 22-04-2016 APT61_RS06890 0e8d78bec392e7aab3df4c0f28968bb5 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 6.1E-89 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APT61_RS06890 0e8d78bec392e7aab3df4c0f28968bb5 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 4.8E-145 T 22-04-2016 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 APT61_RS06890 0e8d78bec392e7aab3df4c0f28968bb5 485 PANTHER PTHR22773:SF41 1 485 7.2E-204 T 22-04-2016 APT61_RS03590 a4adefd56ea449b3fd713ff0a9cb1995 386 SUPERFAMILY SSF56059 1 168 2.83E-94 T 22-04-2016 APT61_RS03590 a4adefd56ea449b3fd713ff0a9cb1995 386 SUPERFAMILY SSF56059 266 383 2.83E-94 T 22-04-2016 APT61_RS03590 a4adefd56ea449b3fd713ff0a9cb1995 386 SUPERFAMILY SSF52440 174 279 4.6E-39 T 22-04-2016 IPR016185 Pre-ATP-grasp domain APT61_RS03590 a4adefd56ea449b3fd713ff0a9cb1995 386 PANTHER PTHR30094 6 386 1.9E-163 T 22-04-2016 APT61_RS03590 a4adefd56ea449b3fd713ff0a9cb1995 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 4.0E-161 T 22-04-2016 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain APT61_RS03590 a4adefd56ea449b3fd713ff0a9cb1995 386 PANTHER PTHR30094:SF0 6 386 1.9E-163 T 22-04-2016 APT61_RS00935 e7ab5e857cea7c85d03ce5e77fe76998 399 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 9.2E-118 T 22-04-2016 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 UniPathway: UPA00252 APT61_RS00935 e7ab5e857cea7c85d03ce5e77fe76998 399 Gene3D G3DSA:1.25.40.10 265 382 3.8E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS00935 e7ab5e857cea7c85d03ce5e77fe76998 399 Gene3D G3DSA:1.25.40.10 83 203 3.8E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS00935 e7ab5e857cea7c85d03ce5e77fe76998 399 PANTHER PTHR23083:SF396 83 385 3.6E-44 T 22-04-2016 APT61_RS00935 e7ab5e857cea7c85d03ce5e77fe76998 399 SUPERFAMILY SSF48452 311 363 1.23E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS00935 e7ab5e857cea7c85d03ce5e77fe76998 399 SUPERFAMILY SSF48452 88 216 1.23E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS00935 e7ab5e857cea7c85d03ce5e77fe76998 399 PANTHER PTHR23083 83 385 3.6E-44 T 22-04-2016 APT61_RS00935 e7ab5e857cea7c85d03ce5e77fe76998 399 Pfam PF07219 HemY protein N-terminus 26 132 3.4E-36 T 22-04-2016 IPR010817 HemY, N-terminal UniPathway: UPA00252 APT61_RS06885 c8fb29f95abb05dc5d3c5b256998debe 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 499 2.2E-182 T 22-04-2016 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 APT61_RS06885 c8fb29f95abb05dc5d3c5b256998debe 509 PANTHER PTHR22773 1 509 1.9E-192 T 22-04-2016 APT61_RS06885 c8fb29f95abb05dc5d3c5b256998debe 509 PANTHER PTHR22773:SF40 1 509 1.9E-192 T 22-04-2016 APT61_RS06885 c8fb29f95abb05dc5d3c5b256998debe 509 Pfam PF00361 Proton-conducting membrane transporter 134 430 7.5E-69 T 22-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 APT61_RS06885 c8fb29f95abb05dc5d3c5b256998debe 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 1.54E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APT61_RS06885 c8fb29f95abb05dc5d3c5b256998debe 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 1.54E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APT61_RS06885 c8fb29f95abb05dc5d3c5b256998debe 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 1.54E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APT61_RS06885 c8fb29f95abb05dc5d3c5b256998debe 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 1.54E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APT61_RS06885 c8fb29f95abb05dc5d3c5b256998debe 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 1.54E-37 T 22-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 APT61_RS14880 ff05a60efef4c41eab3fdbf0065e46ad 215 SUPERFAMILY SSF56281 2 209 1.35E-60 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS14880 ff05a60efef4c41eab3fdbf0065e46ad 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 2.6E-31 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS14880 ff05a60efef4c41eab3fdbf0065e46ad 215 Gene3D G3DSA:3.60.15.10 2 210 3.0E-66 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS14880 ff05a60efef4c41eab3fdbf0065e46ad 215 SMART SM00849 12 192 2.1E-42 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS14880 ff05a60efef4c41eab3fdbf0065e46ad 215 PANTHER PTHR11935 1 212 7.9E-136 T 22-04-2016 APT61_RS14880 ff05a60efef4c41eab3fdbf0065e46ad 215 PANTHER PTHR11935:SF115 1 212 7.9E-136 T 22-04-2016 APT61_RS00955 bbb6657316921d46f71a10f8c7ce87f8 847 PANTHER PTHR38760 2 847 0.0 T 22-04-2016 APT61_RS00955 bbb6657316921d46f71a10f8c7ce87f8 847 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 22-04-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 APT61_RS00955 bbb6657316921d46f71a10f8c7ce87f8 847 PIRSF PIRSF001444 1 846 0.0 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 APT61_RS00955 bbb6657316921d46f71a10f8c7ce87f8 847 Pfam PF01295 Adenylate cyclase, class-I 228 825 4.9E-256 T 22-04-2016 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 APT61_RS00955 bbb6657316921d46f71a10f8c7ce87f8 847 Pfam PF12633 Adenylate cyclase NT domain 5 200 9.5E-82 T 22-04-2016 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 APT61_RS00955 bbb6657316921d46f71a10f8c7ce87f8 847 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 22-04-2016 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 APT61_RS10620 e7f6c25f7ab532f6c655c38dc58beb85 388 PANTHER PTHR30199:SF0 9 387 3.9E-162 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 APT61_RS10620 e7f6c25f7ab532f6c655c38dc58beb85 388 TIGRFAM TIGR00843 benE: benzoate transporter 2 382 3.0E-162 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 APT61_RS10620 e7f6c25f7ab532f6c655c38dc58beb85 388 PANTHER PTHR30199 9 387 3.9E-162 T 22-04-2016 APT61_RS10620 e7f6c25f7ab532f6c655c38dc58beb85 388 Pfam PF03594 Benzoate membrane transport protein 7 381 2.2E-144 T 22-04-2016 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 APT61_RS00780 1392c83dc75d440a043f2a57dc241890 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APT61_RS00780 1392c83dc75d440a043f2a57dc241890 548 SUPERFAMILY SSF52518 1 172 5.16E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS00780 1392c83dc75d440a043f2a57dc241890 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 187 321 3.1E-43 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APT61_RS00780 1392c83dc75d440a043f2a57dc241890 548 SUPERFAMILY SSF52467 183 342 2.41E-58 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS00780 1392c83dc75d440a043f2a57dc241890 548 PANTHER PTHR18968 1 545 7.4E-266 T 22-04-2016 APT61_RS00780 1392c83dc75d440a043f2a57dc241890 548 Gene3D G3DSA:3.40.50.970 335 537 1.9E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS00780 1392c83dc75d440a043f2a57dc241890 548 PANTHER PTHR18968:SF116 1 545 7.4E-266 T 22-04-2016 APT61_RS00780 1392c83dc75d440a043f2a57dc241890 548 SUPERFAMILY SSF52518 357 546 1.25E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS00780 1392c83dc75d440a043f2a57dc241890 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 3.1E-218 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS00780 1392c83dc75d440a043f2a57dc241890 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 2.4E-50 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APT61_RS00780 1392c83dc75d440a043f2a57dc241890 548 Gene3D G3DSA:3.40.50.1220 184 334 2.7E-59 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS00780 1392c83dc75d440a043f2a57dc241890 548 Gene3D G3DSA:3.40.50.970 1 170 5.4E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS00780 1392c83dc75d440a043f2a57dc241890 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 163 2.5E-56 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APT61_RS07110 6181a47c26307fb378a1d95e5d5f817b 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 3.7E-59 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 APT61_RS07110 6181a47c26307fb378a1d95e5d5f817b 235 PANTHER PTHR21600:SF19 1 230 2.5E-76 T 22-04-2016 APT61_RS07110 6181a47c26307fb378a1d95e5d5f817b 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 APT61_RS07110 6181a47c26307fb378a1d95e5d5f817b 235 Pfam PF01479 S4 domain 1 47 4.5E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS07110 6181a47c26307fb378a1d95e5d5f817b 235 PANTHER PTHR21600 1 230 2.5E-76 T 22-04-2016 APT61_RS07110 6181a47c26307fb378a1d95e5d5f817b 235 SMART SM00363 1 60 2.4E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS07110 6181a47c26307fb378a1d95e5d5f817b 235 SUPERFAMILY SSF55120 61 227 1.39E-47 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS07110 6181a47c26307fb378a1d95e5d5f817b 235 Gene3D G3DSA:3.10.290.10 1 64 1.5E-20 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS07110 6181a47c26307fb378a1d95e5d5f817b 235 Pfam PF00849 RNA pseudouridylate synthase 62 192 1.1E-18 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS07110 6181a47c26307fb378a1d95e5d5f817b 235 SUPERFAMILY SSF55174 1 85 3.24E-15 T 22-04-2016 APT61_RS12660 acb67f43b92aebde95502cf541b55869 542 PANTHER PTHR30443:SF0 1 541 3.4E-257 T 22-04-2016 APT61_RS12660 acb67f43b92aebde95502cf541b55869 542 Pfam PF00884 Sulfatase 235 524 4.8E-53 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APT61_RS12660 acb67f43b92aebde95502cf541b55869 542 PANTHER PTHR30443 1 541 3.4E-257 T 22-04-2016 APT61_RS12660 acb67f43b92aebde95502cf541b55869 542 Gene3D G3DSA:3.40.720.10 236 529 4.2E-23 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APT61_RS12660 acb67f43b92aebde95502cf541b55869 542 SUPERFAMILY SSF53649 235 526 3.2E-26 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APT61_RS12660 acb67f43b92aebde95502cf541b55869 542 Pfam PF08019 Domain of unknown function (DUF1705) 55 204 2.4E-47 T 22-04-2016 IPR012549 Domain of unknown function DUF1705 GO:0016021 APT61_RS11820 893c85489e8c8476c3cb24647f623df5 342 Gene3D G3DSA:2.40.50.100 49 79 1.3E-21 T 22-04-2016 APT61_RS11820 893c85489e8c8476c3cb24647f623df5 342 Gene3D G3DSA:2.40.50.100 210 243 1.3E-21 T 22-04-2016 APT61_RS11820 893c85489e8c8476c3cb24647f623df5 342 PANTHER PTHR30386:SF7 7 342 1.6E-93 T 22-04-2016 APT61_RS11820 893c85489e8c8476c3cb24647f623df5 342 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 45 289 9.1E-21 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT61_RS11820 893c85489e8c8476c3cb24647f623df5 342 Pfam PF00529 HlyD membrane-fusion protein of T1SS 125 335 9.8E-8 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 APT61_RS11820 893c85489e8c8476c3cb24647f623df5 342 PANTHER PTHR30386 7 342 1.6E-93 T 22-04-2016 APT61_RS11820 893c85489e8c8476c3cb24647f623df5 342 SUPERFAMILY SSF111369 166 287 2.75E-16 T 22-04-2016 APT61_RS11820 893c85489e8c8476c3cb24647f623df5 342 SUPERFAMILY SSF111369 48 130 4.18E-10 T 22-04-2016 APT61_RS17045 42e03ffc0f55d96b62e65aa8fa4d17c0 304 SUPERFAMILY SSF117892 49 183 4.32E-41 T 22-04-2016 IPR001107 Band 7 domain APT61_RS17045 42e03ffc0f55d96b62e65aa8fa4d17c0 304 Pfam PF01145 SPFH domain / Band 7 family 22 203 8.6E-33 T 22-04-2016 IPR001107 Band 7 domain APT61_RS17045 42e03ffc0f55d96b62e65aa8fa4d17c0 304 SMART SM00244 18 176 7.2E-58 T 22-04-2016 IPR001107 Band 7 domain APT61_RS17045 42e03ffc0f55d96b62e65aa8fa4d17c0 304 PRINTS PR00721 Stomatin signature 73 94 5.3E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APT61_RS17045 42e03ffc0f55d96b62e65aa8fa4d17c0 304 PRINTS PR00721 Stomatin signature 128 151 5.3E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APT61_RS17045 42e03ffc0f55d96b62e65aa8fa4d17c0 304 PRINTS PR00721 Stomatin signature 171 192 5.3E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APT61_RS17045 42e03ffc0f55d96b62e65aa8fa4d17c0 304 PRINTS PR00721 Stomatin signature 108 125 5.3E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APT61_RS17045 42e03ffc0f55d96b62e65aa8fa4d17c0 304 PRINTS PR00721 Stomatin signature 152 170 5.3E-27 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APT61_RS17045 42e03ffc0f55d96b62e65aa8fa4d17c0 304 PANTHER PTHR10264:SF27 1 304 3.5E-126 T 22-04-2016 APT61_RS17045 42e03ffc0f55d96b62e65aa8fa4d17c0 304 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 22-04-2016 IPR018080 Band 7/stomatin-like, conserved site APT61_RS17045 42e03ffc0f55d96b62e65aa8fa4d17c0 304 PANTHER PTHR10264 1 304 3.5E-126 T 22-04-2016 IPR001972 Stomatin family GO:0016020 APT61_RS22175 6e89256cf0b974eb07b360557e0c45f1 346 PANTHER PTHR30570 1 344 1.1E-140 T 22-04-2016 APT61_RS22175 6e89256cf0b974eb07b360557e0c45f1 346 Pfam PF12849 PBP superfamily domain 27 307 2.3E-62 T 22-04-2016 IPR024370 PBP domain APT61_RS22175 6e89256cf0b974eb07b360557e0c45f1 346 Gene3D G3DSA:3.40.190.10 27 177 3.6E-55 T 22-04-2016 APT61_RS22175 6e89256cf0b974eb07b360557e0c45f1 346 Gene3D G3DSA:3.40.190.10 181 338 2.5E-36 T 22-04-2016 APT61_RS22175 6e89256cf0b974eb07b360557e0c45f1 346 PANTHER PTHR30570:SF0 1 344 1.1E-140 T 22-04-2016 APT61_RS22175 6e89256cf0b974eb07b360557e0c45f1 346 PIRSF PIRSF002756 1 338 3.5E-106 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 APT61_RS22175 6e89256cf0b974eb07b360557e0c45f1 346 SUPERFAMILY SSF53850 27 338 2.64E-98 T 22-04-2016 APT61_RS22175 6e89256cf0b974eb07b360557e0c45f1 346 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 29 335 2.7E-129 T 22-04-2016 IPR005673 ABC transporter, phosphate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 APT61_RS09445 c88bb24b0ebf6b8924caf6df0b83e418 245 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 167 237 1.4E-19 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 APT61_RS09445 c88bb24b0ebf6b8924caf6df0b83e418 245 SUPERFAMILY SSF74653 159 227 2.62E-21 T 22-04-2016 APT61_RS09445 c88bb24b0ebf6b8924caf6df0b83e418 245 PANTHER PTHR33446:SF1 1 245 9.5E-56 T 22-04-2016 APT61_RS09445 c88bb24b0ebf6b8924caf6df0b83e418 245 PANTHER PTHR33446 1 245 9.5E-56 T 22-04-2016 APT61_RS09445 c88bb24b0ebf6b8924caf6df0b83e418 245 PRINTS PR01374 Gram-negative bacterial tonB protein signature 98 108 1.8E-38 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APT61_RS09445 c88bb24b0ebf6b8924caf6df0b83e418 245 PRINTS PR01374 Gram-negative bacterial tonB protein signature 182 200 1.8E-38 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APT61_RS09445 c88bb24b0ebf6b8924caf6df0b83e418 245 PRINTS PR01374 Gram-negative bacterial tonB protein signature 201 218 1.8E-38 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APT61_RS09445 c88bb24b0ebf6b8924caf6df0b83e418 245 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 182 1.8E-38 T 22-04-2016 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 APT61_RS09445 c88bb24b0ebf6b8924caf6df0b83e418 245 Pfam PF16031 TonB N-terminal region 33 163 6.2E-29 T 22-04-2016 APT61_RS09445 c88bb24b0ebf6b8924caf6df0b83e418 245 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 166 234 9.9E-18 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 APT61_RS09445 c88bb24b0ebf6b8924caf6df0b83e418 245 Gene3D G3DSA:3.30.1150.10 139 240 2.5E-11 T 22-04-2016 APT61_RS15380 f05de20549eef33b46b941727bb97473 391 TIGRFAM TIGR01789 lycopene_cycl: lycopene cyclase 6 374 4.6E-158 T 22-04-2016 IPR008461 Lycopene cyclase GO:0016117|GO:0045436 APT61_RS15380 f05de20549eef33b46b941727bb97473 391 TIGRFAM TIGR01790 carotene-cycl: lycopene cyclase family protein 6 372 9.1E-103 T 22-04-2016 IPR010108 Lycopene cyclase, beta/epsilon GO:0016117|GO:0016705 APT61_RS15380 f05de20549eef33b46b941727bb97473 391 Gene3D G3DSA:3.50.50.60 72 140 4.3E-12 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS15380 f05de20549eef33b46b941727bb97473 391 Gene3D G3DSA:3.50.50.60 5 53 3.9E-7 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS15380 f05de20549eef33b46b941727bb97473 391 SUPERFAMILY SSF51905 5 182 8.84E-19 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS15380 f05de20549eef33b46b941727bb97473 391 Pfam PF05834 Lycopene cyclase protein 6 373 8.9E-89 T 22-04-2016 APT61_RS05775 42ae1b99debc421ab68af442bfc73bed 317 Pfam PF17188 MucB/RseB C-terminal domain 219 312 3.4E-29 T 22-04-2016 IPR033436 MucB/RseB, C-terminal APT61_RS05775 42ae1b99debc421ab68af442bfc73bed 317 PIRSF PIRSF005427 1 317 1.3E-97 T 22-04-2016 IPR005588 MucB/RseB APT61_RS05775 42ae1b99debc421ab68af442bfc73bed 317 PANTHER PTHR38782 2 317 1.0E-136 T 22-04-2016 APT61_RS05775 42ae1b99debc421ab68af442bfc73bed 317 Gene3D G3DSA:2.50.20.10 39 189 4.8E-8 T 22-04-2016 APT61_RS05775 42ae1b99debc421ab68af442bfc73bed 317 PANTHER PTHR38782:SF1 2 317 1.0E-136 T 22-04-2016 APT61_RS05775 42ae1b99debc421ab68af442bfc73bed 317 Pfam PF03888 MucB/RseB N-terminal domain 28 208 1.9E-62 T 22-04-2016 IPR033434 MucB/RseB, N-terminal APT61_RS13125 c72a278394e11743e4c837a666914427 452 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 440 1.5E-167 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 APT61_RS13125 c72a278394e11743e4c837a666914427 452 PIRSF PIRSF006351 1 447 6.9E-130 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 APT61_RS13125 c72a278394e11743e4c837a666914427 452 PANTHER PTHR33989 1 445 6.5E-203 T 22-04-2016 APT61_RS13125 c72a278394e11743e4c837a666914427 452 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 440 1.5E-167 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 APT61_RS13125 c72a278394e11743e4c837a666914427 452 PANTHER PTHR33989:SF4 1 445 6.5E-203 T 22-04-2016 APT61_RS13125 c72a278394e11743e4c837a666914427 452 Pfam PF02378 Phosphotransferase system, EIIC 30 363 4.0E-46 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS05200 18d2d36b3bb60aad72edc34cb408ab2c 200 PANTHER PTHR24322:SF57 125 155 3.1E-14 T 22-04-2016 APT61_RS05200 18d2d36b3bb60aad72edc34cb408ab2c 200 PANTHER PTHR24322:SF57 5 109 3.1E-14 T 22-04-2016 APT61_RS05200 18d2d36b3bb60aad72edc34cb408ab2c 200 Gene3D G3DSA:3.40.50.720 1 198 1.6E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05200 18d2d36b3bb60aad72edc34cb408ab2c 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 115 2.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05200 18d2d36b3bb60aad72edc34cb408ab2c 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 144 2.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05200 18d2d36b3bb60aad72edc34cb408ab2c 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 54 65 2.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05200 18d2d36b3bb60aad72edc34cb408ab2c 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 2.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05200 18d2d36b3bb60aad72edc34cb408ab2c 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 2.0E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05200 18d2d36b3bb60aad72edc34cb408ab2c 200 SUPERFAMILY SSF51735 1 198 1.17E-27 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05200 18d2d36b3bb60aad72edc34cb408ab2c 200 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 33 166 4.1E-17 T 22-04-2016 APT61_RS05200 18d2d36b3bb60aad72edc34cb408ab2c 200 PANTHER PTHR24322 125 155 3.1E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05200 18d2d36b3bb60aad72edc34cb408ab2c 200 PANTHER PTHR24322 5 109 3.1E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05820 1e18d0fd6a12156e9cd22c4229cbf74a 86 SUPERFAMILY SSF54862 5 61 3.45E-17 T 22-04-2016 APT61_RS05820 1e18d0fd6a12156e9cd22c4229cbf74a 86 PANTHER PTHR24960 1 85 1.4E-36 T 22-04-2016 APT61_RS05820 1e18d0fd6a12156e9cd22c4229cbf74a 86 Gene3D G3DSA:3.30.70.20 4 74 3.7E-17 T 22-04-2016 APT61_RS05820 1e18d0fd6a12156e9cd22c4229cbf74a 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS05820 1e18d0fd6a12156e9cd22c4229cbf74a 86 PANTHER PTHR24960:SF38 1 85 1.4E-36 T 22-04-2016 APT61_RS05820 1e18d0fd6a12156e9cd22c4229cbf74a 86 Pfam PF12838 4Fe-4S dicluster domain 8 55 4.5E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS01770 94e82ba684c986d552d143c4ebdb0943 186 Gene3D G3DSA:3.90.79.10 9 183 4.0E-43 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS01770 94e82ba684c986d552d143c4ebdb0943 186 SUPERFAMILY SSF55811 4 182 2.3E-38 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS01770 94e82ba684c986d552d143c4ebdb0943 186 PANTHER PTHR11839:SF12 5 183 4.6E-107 T 22-04-2016 APT61_RS01770 94e82ba684c986d552d143c4ebdb0943 186 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 APT61_RS01770 94e82ba684c986d552d143c4ebdb0943 186 PANTHER PTHR11839 5 183 4.6E-107 T 22-04-2016 APT61_RS01770 94e82ba684c986d552d143c4ebdb0943 186 Pfam PF00293 NUDIX domain 47 129 5.6E-13 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APT61_RS10145 66aac5a35196408b1b82f95108b356ca 151 SUPERFAMILY SSF55874 28 117 6.62E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS10145 66aac5a35196408b1b82f95108b356ca 151 Gene3D G3DSA:3.30.565.10 20 116 8.5E-4 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS10145 66aac5a35196408b1b82f95108b356ca 151 Pfam PF13581 Histidine kinase-like ATPase domain 10 137 1.1E-13 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS04650 c6d598fd71cad0037229c35fb0015a73 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 1.6E-32 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APT61_RS04650 c6d598fd71cad0037229c35fb0015a73 120 PIRSF PIRSF006113 1 120 6.1E-55 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APT61_RS04650 c6d598fd71cad0037229c35fb0015a73 120 Gene3D G3DSA:3.30.479.10 2 120 7.5E-38 T 22-04-2016 APT61_RS04650 c6d598fd71cad0037229c35fb0015a73 120 PANTHER PTHR12589 5 120 1.3E-51 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APT61_RS04650 c6d598fd71cad0037229c35fb0015a73 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 6 120 1.8E-32 T 22-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein APT61_RS04650 c6d598fd71cad0037229c35fb0015a73 120 SUPERFAMILY SSF55620 3 119 1.28E-39 T 22-04-2016 APT61_RS06640 d753bd11a41182638ba6d86de352b823 269 PANTHER PTHR30269:SF0 10 262 1.2E-112 T 22-04-2016 APT61_RS06640 d753bd11a41182638ba6d86de352b823 269 Pfam PF01925 Sulfite exporter TauE/SafE 18 253 1.1E-43 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APT61_RS06640 d753bd11a41182638ba6d86de352b823 269 PANTHER PTHR30269 10 262 1.2E-112 T 22-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 APT61_RS13900 5cc6cdf7bfd5b59608ba2af73cd22260 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 2.0E-10 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 APT61_RS13900 5cc6cdf7bfd5b59608ba2af73cd22260 179 PANTHER PTHR35603:SF2 1 177 5.3E-96 T 22-04-2016 APT61_RS13900 5cc6cdf7bfd5b59608ba2af73cd22260 179 PANTHER PTHR35603 1 177 5.3E-96 T 22-04-2016 APT61_RS01000 eb55c68a61f9712def49ee10d7a3fd65 297 SUPERFAMILY SSF103481 188 284 1.11E-7 T 22-04-2016 APT61_RS01000 eb55c68a61f9712def49ee10d7a3fd65 297 TIGRFAM TIGR00688 rarD: protein RarD 8 261 1.2E-109 T 22-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 APT61_RS01000 eb55c68a61f9712def49ee10d7a3fd65 297 Pfam PF00892 EamA-like transporter family 9 142 1.9E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS01000 eb55c68a61f9712def49ee10d7a3fd65 297 SUPERFAMILY SSF103481 42 145 9.02E-14 T 22-04-2016 APT61_RS01000 eb55c68a61f9712def49ee10d7a3fd65 297 PANTHER PTHR22911:SF41 1 297 4.8E-159 T 22-04-2016 APT61_RS01000 eb55c68a61f9712def49ee10d7a3fd65 297 PANTHER PTHR22911 1 297 4.8E-159 T 22-04-2016 APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 SMART SM00859 3 122 2.2E-24 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 120 4.6E-24 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 Gene3D G3DSA:3.30.360.10 143 350 4.3E-77 T 22-04-2016 APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 367 34.075 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 353 1.7E-60 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 Gene3D G3DSA:3.40.50.720 1 142 6.7E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 261 275 - T 22-04-2016 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 PANTHER PTHR10174 201 366 1.2E-157 T 22-04-2016 APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 PANTHER PTHR10174 103 179 1.2E-157 T 22-04-2016 APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 366 5.7E-224 T 22-04-2016 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 SUPERFAMILY SSF51735 1 147 5.36E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 PANTHER PTHR10174:SF116 201 366 1.2E-157 T 22-04-2016 APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 PANTHER PTHR10174:SF116 103 179 1.2E-157 T 22-04-2016 APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 SUPERFAMILY SSF55347 134 354 1.14E-78 T 22-04-2016 APT61_RS01620 e3f11fd618fac94cebd22378ed325964 367 PIRSF PIRSF000148 1 367 8.5E-71 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS08505 28a419297cebb0eb9bb1d8b5cfbb727c 379 SUPERFAMILY SSF48208 26 376 8.28E-89 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APT61_RS08505 28a419297cebb0eb9bb1d8b5cfbb727c 379 PANTHER PTHR33886 8 376 8.2E-170 T 22-04-2016 APT61_RS08505 28a419297cebb0eb9bb1d8b5cfbb727c 379 PANTHER PTHR33886:SF2 8 376 8.2E-170 T 22-04-2016 APT61_RS08505 28a419297cebb0eb9bb1d8b5cfbb727c 379 Gene3D G3DSA:1.50.10.10 17 376 8.8E-106 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APT61_RS08505 28a419297cebb0eb9bb1d8b5cfbb727c 379 Pfam PF07470 Glycosyl Hydrolase Family 88 38 377 4.7E-108 T 22-04-2016 IPR010905 Glycosyl hydrolase, family 88 APT61_RS21665 43e5c270243aa14a76c646d25c8e2003 159 PANTHER PTHR21342:SF1 1 159 1.5E-84 T 22-04-2016 APT61_RS21665 43e5c270243aa14a76c646d25c8e2003 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 0.003 T 22-04-2016 APT61_RS21665 43e5c270243aa14a76c646d25c8e2003 159 SUPERFAMILY SSF52374 3 156 1.31E-45 T 22-04-2016 APT61_RS21665 43e5c270243aa14a76c646d25c8e2003 159 Pfam PF01467 Cytidylyltransferase-like 6 134 2.6E-22 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APT61_RS21665 43e5c270243aa14a76c646d25c8e2003 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.2E-52 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APT61_RS21665 43e5c270243aa14a76c646d25c8e2003 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.2E-52 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APT61_RS21665 43e5c270243aa14a76c646d25c8e2003 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.2E-52 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APT61_RS21665 43e5c270243aa14a76c646d25c8e2003 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.2E-52 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APT61_RS21665 43e5c270243aa14a76c646d25c8e2003 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.2E-52 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APT61_RS21665 43e5c270243aa14a76c646d25c8e2003 159 Gene3D G3DSA:3.40.50.620 2 157 8.4E-55 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS21665 43e5c270243aa14a76c646d25c8e2003 159 PANTHER PTHR21342 1 159 1.5E-84 T 22-04-2016 APT61_RS21665 43e5c270243aa14a76c646d25c8e2003 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 157 2.0E-61 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APT61_RS21665 43e5c270243aa14a76c646d25c8e2003 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.481 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 APT61_RS21665 43e5c270243aa14a76c646d25c8e2003 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 64 4.2E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APT61_RS10435 8f2443545e13472e6821730daa3a6528 307 PANTHER PTHR30537 1 305 1.2E-136 T 22-04-2016 APT61_RS10435 8f2443545e13472e6821730daa3a6528 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10435 8f2443545e13472e6821730daa3a6528 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10435 8f2443545e13472e6821730daa3a6528 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.9E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10435 8f2443545e13472e6821730daa3a6528 307 Gene3D G3DSA:1.10.10.10 1 85 1.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10435 8f2443545e13472e6821730daa3a6528 307 Gene3D G3DSA:3.40.190.10 177 265 6.3E-19 T 22-04-2016 APT61_RS10435 8f2443545e13472e6821730daa3a6528 307 SUPERFAMILY SSF46785 1 112 3.74E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10435 8f2443545e13472e6821730daa3a6528 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 3.0E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS10435 8f2443545e13472e6821730daa3a6528 307 Pfam PF03466 LysR substrate binding domain 88 296 1.1E-42 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS10435 8f2443545e13472e6821730daa3a6528 307 PANTHER PTHR30537:SF23 1 305 1.2E-136 T 22-04-2016 APT61_RS10435 8f2443545e13472e6821730daa3a6528 307 SUPERFAMILY SSF53850 88 300 1.49E-43 T 22-04-2016 APT61_RS10435 8f2443545e13472e6821730daa3a6528 307 Gene3D G3DSA:3.40.190.10 88 176 2.7E-8 T 22-04-2016 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 708 744 2.8E-11 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 596 621 1.2E-5 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Gene3D G3DSA:2.20.25.10 808 864 2.6E-32 T 22-04-2016 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 SMART SM00436 132 220 1.0E-48 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 PANTHER PTHR11390 1 37 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 PANTHER PTHR11390 66 775 0.0 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Pfam PF08272 Topoisomerase I zinc-ribbon-like 823 861 3.8E-22 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Pfam PF08272 Topoisomerase I zinc-ribbon-like 757 792 3.5E-12 T 22-04-2016 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Gene3D G3DSA:3.30.65.10 744 805 1.5E-26 T 22-04-2016 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Gene3D G3DSA:3.30.65.10 707 742 1.1E-11 T 22-04-2016 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Gene3D G3DSA:3.30.65.10 596 633 2.2E-11 T 22-04-2016 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 SMART SM00493 3 131 5.7E-32 T 22-04-2016 IPR006171 Toprim domain APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Pfam PF01751 Toprim domain 5 141 8.8E-34 T 22-04-2016 IPR006171 Toprim domain APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Gene3D G3DSA:2.70.20.10 337 472 4.9E-36 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Gene3D G3DSA:2.70.20.10 212 332 7.2E-30 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 SUPERFAMILY SSF57783 703 742 2.89E-7 T 22-04-2016 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 308 322 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 634 2.9E-260 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 389 405 5.9E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 313 322 5.9E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 105 118 5.9E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 489 503 5.9E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 190 208 5.9E-37 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 SUPERFAMILY SSF56712 3 608 3.01E-202 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Pfam PF01131 DNA topoisomerase 156 564 1.8E-127 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 SUPERFAMILY SSF57783 743 806 2.55E-19 T 22-04-2016 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 SMART SM00437 271 526 2.8E-119 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 SUPERFAMILY SSF57783 808 863 4.25E-23 T 22-04-2016 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 PANTHER PTHR11390:SF27 1 37 0.0 T 22-04-2016 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 PANTHER PTHR11390:SF27 66 775 0.0 T 22-04-2016 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Gene3D G3DSA:1.10.460.10 163 210 1.6E-58 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Gene3D G3DSA:1.10.460.10 473 595 1.6E-58 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 722 54.669 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 APT61_RS09555 83b7c8635d2a9f35f33c1c17699563e3 864 Gene3D G3DSA:3.40.50.140 1 162 2.5E-58 T 22-04-2016 IPR006171 Toprim domain APT61_RS05435 8d449848440899844e42fff4f9a47622 186 Pfam PF04264 YceI-like domain 25 180 8.9E-24 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APT61_RS05435 8d449848440899844e42fff4f9a47622 186 SUPERFAMILY SSF101874 24 182 4.05E-36 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APT61_RS05435 8d449848440899844e42fff4f9a47622 186 PANTHER PTHR34406 1 183 3.9E-24 T 22-04-2016 APT61_RS05435 8d449848440899844e42fff4f9a47622 186 Gene3D G3DSA:2.40.128.110 25 183 1.6E-35 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APT61_RS05435 8d449848440899844e42fff4f9a47622 186 SMART SM00867 23 181 6.1E-31 T 22-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like APT61_RS05435 8d449848440899844e42fff4f9a47622 186 PANTHER PTHR34406:SF1 1 183 3.9E-24 T 22-04-2016 APT61_RS03415 76067183283a6df9729df94e16c21cf3 1024 PANTHER PTHR37813 616 1023 1.9E-118 T 22-04-2016 APT61_RS03415 76067183283a6df9729df94e16c21cf3 1024 PANTHER PTHR37813 1 577 1.9E-118 T 22-04-2016 APT61_RS03415 76067183283a6df9729df94e16c21cf3 1024 Pfam PF10145 Phage-related minor tail protein 246 457 2.3E-23 T 22-04-2016 IPR010090 Phage tail tape measure protein APT61_RS03415 76067183283a6df9729df94e16c21cf3 1024 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 200 566 2.3E-95 T 22-04-2016 IPR010090 Phage tail tape measure protein APT61_RS14140 b46e9d692b56b44362c443a8dca9c908 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 6.0E-159 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS14140 b46e9d692b56b44362c443a8dca9c908 348 PIRSF PIRSF001237 4 348 4.5E-140 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS14140 b46e9d692b56b44362c443a8dca9c908 348 SUPERFAMILY SSF51556 8 346 4.86E-147 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS14140 b46e9d692b56b44362c443a8dca9c908 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS14140 b46e9d692b56b44362c443a8dca9c908 348 PANTHER PTHR11647 8 334 2.1E-155 T 22-04-2016 APT61_RS14140 b46e9d692b56b44362c443a8dca9c908 348 Gene3D G3DSA:3.20.20.140 6 346 9.4E-133 T 22-04-2016 APT61_RS14140 b46e9d692b56b44362c443a8dca9c908 348 Pfam PF01979 Amidohydrolase family 15 307 3.5E-20 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APT61_RS14140 b46e9d692b56b44362c443a8dca9c908 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 60.271 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS14140 b46e9d692b56b44362c443a8dca9c908 348 PANTHER PTHR11647:SF59 8 334 2.1E-155 T 22-04-2016 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS14140 b46e9d692b56b44362c443a8dca9c908 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 15 23 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 APT61_RS11335 f5fff73636cc5f2fa83260c4be84fade 278 PRINTS PR00412 Epoxide hydrolase signature 49 64 3.5E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS11335 f5fff73636cc5f2fa83260c4be84fade 278 PRINTS PR00412 Epoxide hydrolase signature 253 275 3.5E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS11335 f5fff73636cc5f2fa83260c4be84fade 278 PRINTS PR00412 Epoxide hydrolase signature 29 47 3.5E-5 T 22-04-2016 IPR000639 Epoxide hydrolase-like GO:0003824 APT61_RS11335 f5fff73636cc5f2fa83260c4be84fade 278 Pfam PF00561 alpha/beta hydrolase fold 24 261 1.4E-27 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS11335 f5fff73636cc5f2fa83260c4be84fade 278 SUPERFAMILY SSF53474 1 278 3.46E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS11335 f5fff73636cc5f2fa83260c4be84fade 278 PANTHER PTHR10992:SF859 4 278 3.1E-114 T 22-04-2016 APT61_RS11335 f5fff73636cc5f2fa83260c4be84fade 278 Gene3D G3DSA:3.40.50.1820 2 277 4.0E-74 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS11335 f5fff73636cc5f2fa83260c4be84fade 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 1.4E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS11335 f5fff73636cc5f2fa83260c4be84fade 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 1.4E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS11335 f5fff73636cc5f2fa83260c4be84fade 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 1.4E-9 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS11335 f5fff73636cc5f2fa83260c4be84fade 278 PANTHER PTHR10992 4 278 3.1E-114 T 22-04-2016 APT61_RS09825 eae93a83f371a88baf9cab040a6ccc95 163 Gene3D G3DSA:2.30.110.20 1 161 6.0E-34 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS09825 eae93a83f371a88baf9cab040a6ccc95 163 PANTHER PTHR34319:SF2 1 163 3.8E-129 T 22-04-2016 APT61_RS09825 eae93a83f371a88baf9cab040a6ccc95 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 1.4E-36 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS09825 eae93a83f371a88baf9cab040a6ccc95 163 SUPERFAMILY SSF141452 2 161 3.79E-44 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS09825 eae93a83f371a88baf9cab040a6ccc95 163 PANTHER PTHR34319 1 163 3.8E-129 T 22-04-2016 APT61_RS09825 eae93a83f371a88baf9cab040a6ccc95 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 6.0E-50 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS05995 466da869d45158699a5225a542ff08a9 774 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 694 771 1.6E-13 T 22-04-2016 IPR009647 Penicillin-binding, C-terminal KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 APT61_RS05995 466da869d45158699a5225a542ff08a9 774 Gene3D G3DSA:3.40.710.10 230 620 1.7E-72 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS05995 466da869d45158699a5225a542ff08a9 774 PANTHER PTHR32282:SF0 11 679 1.1E-226 T 22-04-2016 APT61_RS05995 466da869d45158699a5225a542ff08a9 774 Pfam PF00912 Transglycosylase 60 226 2.9E-51 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 APT61_RS05995 466da869d45158699a5225a542ff08a9 774 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 37 772 1.1E-263 T 22-04-2016 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 KEGG: 00230+2.4.2.-|KEGG: 00514+2.4.2.-|UniPathway: UPA00219 APT61_RS05995 466da869d45158699a5225a542ff08a9 774 Pfam PF00905 Penicillin binding protein transpeptidase domain 305 519 5.7E-10 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 APT61_RS05995 466da869d45158699a5225a542ff08a9 774 Gene3D G3DSA:1.10.3810.10 59 229 2.1E-54 T 22-04-2016 APT61_RS05995 466da869d45158699a5225a542ff08a9 774 PANTHER PTHR32282 11 679 1.1E-226 T 22-04-2016 APT61_RS05995 466da869d45158699a5225a542ff08a9 774 SUPERFAMILY SSF56601 208 645 2.21E-90 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS05995 466da869d45158699a5225a542ff08a9 774 SUPERFAMILY SSF53955 39 258 5.62E-65 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS17665 d62588086437f65913fa1eef2a0bebb1 320 PANTHER PTHR30024:SF17 12 320 2.0E-114 T 22-04-2016 APT61_RS17665 d62588086437f65913fa1eef2a0bebb1 320 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 233 2.4E-26 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 APT61_RS17665 d62588086437f65913fa1eef2a0bebb1 320 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 25 320 6.5E-151 T 22-04-2016 IPR010068 Periplasmic binding protein TauA GO:0015734|GO:0042597 APT61_RS17665 d62588086437f65913fa1eef2a0bebb1 320 Gene3D G3DSA:3.40.190.10 106 214 1.8E-21 T 22-04-2016 APT61_RS17665 d62588086437f65913fa1eef2a0bebb1 320 SUPERFAMILY SSF53850 33 306 8.54E-47 T 22-04-2016 APT61_RS17665 d62588086437f65913fa1eef2a0bebb1 320 PANTHER PTHR30024 12 320 2.0E-114 T 22-04-2016 APT61_RS17665 d62588086437f65913fa1eef2a0bebb1 320 Gene3D G3DSA:3.40.190.10 215 246 1.9E-4 T 22-04-2016 APT61_RS17665 d62588086437f65913fa1eef2a0bebb1 320 Gene3D G3DSA:3.40.190.10 66 101 1.9E-4 T 22-04-2016 APT61_RS17665 d62588086437f65913fa1eef2a0bebb1 320 SMART SM00062 24 239 5.8E-29 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS16790 1f84403fe2dab4d5206f06c6a4b67322 160 Pfam PF00313 'Cold-shock' DNA-binding domain 1 62 2.3E-8 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS16790 1f84403fe2dab4d5206f06c6a4b67322 160 SUPERFAMILY SSF50249 2 63 1.81E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS16790 1f84403fe2dab4d5206f06c6a4b67322 160 Gene3D G3DSA:2.40.50.140 1 67 5.2E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS16805 b4656f747241a9145d0d1c807f7b6d8d 373 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 292 2.0E-81 T 22-04-2016 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 APT61_RS16805 b4656f747241a9145d0d1c807f7b6d8d 373 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 373 91.853 T 22-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 APT61_RS16805 b4656f747241a9145d0d1c807f7b6d8d 373 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 295 9.9E-111 T 22-04-2016 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 APT61_RS16805 b4656f747241a9145d0d1c807f7b6d8d 373 PANTHER PTHR36510 1 372 1.4E-171 T 22-04-2016 APT61_RS16805 b4656f747241a9145d0d1c807f7b6d8d 373 PANTHER PTHR36510:SF1 1 372 1.4E-171 T 22-04-2016 APT61_RS16805 b4656f747241a9145d0d1c807f7b6d8d 373 SUPERFAMILY SSF55931 4 369 1.37E-108 T 22-04-2016 APT61_RS04265 eae8ab81f280620de14d20e46003e244 163 PANTHER PTHR36448:SF2 8 160 1.4E-52 T 22-04-2016 APT61_RS04265 eae8ab81f280620de14d20e46003e244 163 Pfam PF07883 Cupin domain 53 99 7.5E-7 T 22-04-2016 IPR013096 Cupin 2, conserved barrel APT61_RS04265 eae8ab81f280620de14d20e46003e244 163 PIRSF PIRSF019307 1 158 1.2E-61 T 22-04-2016 IPR014500 Uncharacterised conserved protein UCP019307, cupin-type APT61_RS04265 eae8ab81f280620de14d20e46003e244 163 Gene3D G3DSA:2.60.120.10 22 120 4.6E-16 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS04265 eae8ab81f280620de14d20e46003e244 163 PANTHER PTHR36448 8 160 1.4E-52 T 22-04-2016 APT61_RS04265 eae8ab81f280620de14d20e46003e244 163 SUPERFAMILY SSF51182 14 119 5.84E-18 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 1.3E-90 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 SUPERFAMILY SSF55174 327 423 9.16E-19 T 22-04-2016 APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 PANTHER PTHR11766 4 423 5.8E-221 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 Gene3D G3DSA:1.10.240.10 238 321 3.8E-42 T 22-04-2016 APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 9.5E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 9.5E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 9.5E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 9.5E-32 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 SMART SM00363 358 419 6.6E-4 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 PANTHER PTHR11766:SF0 4 423 5.8E-221 T 22-04-2016 APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 Gene3D G3DSA:3.10.290.10 322 423 1.2E-29 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.177 T 22-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 Gene3D G3DSA:3.40.50.620 4 237 5.8E-103 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 424 1.1E-146 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 APT61_RS12595 3b43fea1e90fae28da245c411ca629c2 424 SUPERFAMILY SSF52374 4 328 4.13E-108 T 22-04-2016 APT61_RS16265 9f0a437dca150fa6e6b0adedd9a638a2 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 6.9E-21 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 APT61_RS16265 9f0a437dca150fa6e6b0adedd9a638a2 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.796 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APT61_RS16265 9f0a437dca150fa6e6b0adedd9a638a2 266 PANTHER PTHR11280 1 263 2.8E-179 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APT61_RS16265 9f0a437dca150fa6e6b0adedd9a638a2 266 SUPERFAMILY SSF100950 1 263 1.21E-104 T 22-04-2016 APT61_RS16265 9f0a437dca150fa6e6b0adedd9a638a2 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 9.3E-141 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APT61_RS16265 9f0a437dca150fa6e6b0adedd9a638a2 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 APT61_RS16265 9f0a437dca150fa6e6b0adedd9a638a2 266 Gene3D G3DSA:3.40.50.1360 1 264 1.6E-112 T 22-04-2016 APT61_RS10270 cc8e2d0aa05cd5f63730dd2f0fcefb9a 225 PANTHER PTHR13604 2 225 1.7E-66 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS10270 cc8e2d0aa05cd5f63730dd2f0fcefb9a 225 Gene3D G3DSA:3.90.1680.10 1 221 2.2E-64 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS10270 cc8e2d0aa05cd5f63730dd2f0fcefb9a 225 Pfam PF02586 SOS response associated peptidase (SRAP) 1 211 8.4E-50 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS10270 cc8e2d0aa05cd5f63730dd2f0fcefb9a 225 SUPERFAMILY SSF143081 2 216 6.93E-59 T 22-04-2016 IPR003738 SOS response associated peptidase (SRAP) KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS17835 a02c67a94e4c53cb256acf239146d288 191 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 184 37.376 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 APT61_RS17835 a02c67a94e4c53cb256acf239146d288 191 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 182 1.2E-82 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 APT61_RS17835 a02c67a94e4c53cb256acf239146d288 191 Pfam PF02441 Flavoprotein 1 127 1.3E-27 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APT61_RS17835 a02c67a94e4c53cb256acf239146d288 191 PANTHER PTHR30108:SF2 1 184 4.1E-90 T 22-04-2016 APT61_RS17835 a02c67a94e4c53cb256acf239146d288 191 PANTHER PTHR30108 1 184 4.1E-90 T 22-04-2016 APT61_RS17835 a02c67a94e4c53cb256acf239146d288 191 Gene3D G3DSA:3.40.50.1950 1 187 8.4E-79 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APT61_RS17835 a02c67a94e4c53cb256acf239146d288 191 SUPERFAMILY SSF52507 1 184 1.83E-62 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APT61_RS17835 a02c67a94e4c53cb256acf239146d288 191 Hamap MF_01986 Probable UbiX-like flavin prenyltransferase. 1 188 47.975 T 22-04-2016 IPR032901 Probable UbiX-like flavin prenyltransferase APT61_RS17100 141f54591c55847af6cbbbb5fce97567 434 SUPERFAMILY SSF53613 36 305 1.26E-44 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS17100 141f54591c55847af6cbbbb5fce97567 434 SUPERFAMILY SSF53613 338 416 1.26E-44 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS17100 141f54591c55847af6cbbbb5fce97567 434 Gene3D G3DSA:3.40.1190.20 337 433 3.4E-49 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS17100 141f54591c55847af6cbbbb5fce97567 434 Gene3D G3DSA:3.40.1190.20 95 298 3.4E-49 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS17100 141f54591c55847af6cbbbb5fce97567 434 PANTHER PTHR10584 17 293 8.7E-212 T 22-04-2016 APT61_RS17100 141f54591c55847af6cbbbb5fce97567 434 PANTHER PTHR10584 332 376 8.7E-212 T 22-04-2016 APT61_RS17100 141f54591c55847af6cbbbb5fce97567 434 PANTHER PTHR10584 393 434 8.7E-212 T 22-04-2016 APT61_RS17100 141f54591c55847af6cbbbb5fce97567 434 Pfam PF00294 pfkB family carbohydrate kinase 138 294 2.6E-8 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB APT61_RS17100 141f54591c55847af6cbbbb5fce97567 434 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 352 365 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 APT61_RS17100 141f54591c55847af6cbbbb5fce97567 434 Gene3D G3DSA:3.30.1110.10 45 94 6.9E-7 T 22-04-2016 APT61_RS17100 141f54591c55847af6cbbbb5fce97567 434 PANTHER PTHR10584:SF202 17 293 8.7E-212 T 22-04-2016 APT61_RS17100 141f54591c55847af6cbbbb5fce97567 434 PANTHER PTHR10584:SF202 332 376 8.7E-212 T 22-04-2016 APT61_RS17100 141f54591c55847af6cbbbb5fce97567 434 PANTHER PTHR10584:SF202 393 434 8.7E-212 T 22-04-2016 APT61_RS02890 d4f24e7aef38b4a412c0410cdc614d41 172 SUPERFAMILY SSF52317 3 170 1.81E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS02890 d4f24e7aef38b4a412c0410cdc614d41 172 Pfam PF01965 DJ-1/PfpI family 3 167 1.4E-54 T 22-04-2016 IPR002818 DJ-1/PfpI APT61_RS02890 d4f24e7aef38b4a412c0410cdc614d41 172 PANTHER PTHR11019 1 167 2.1E-75 T 22-04-2016 APT61_RS02890 d4f24e7aef38b4a412c0410cdc614d41 172 Gene3D G3DSA:3.40.50.880 1 170 2.0E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS02890 d4f24e7aef38b4a412c0410cdc614d41 172 PANTHER PTHR11019:SF115 1 167 2.1E-75 T 22-04-2016 APT61_RS02890 d4f24e7aef38b4a412c0410cdc614d41 172 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 171 3.4E-65 T 22-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 APT61_RS09775 b15807d0f3d7b99418145b7b54a2a4ad 237 Gene3D G3DSA:3.40.630.10 18 221 7.9E-42 T 22-04-2016 APT61_RS09775 b15807d0f3d7b99418145b7b54a2a4ad 237 Pfam PF00246 Zinc carboxypeptidase 37 157 2.8E-12 T 22-04-2016 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 APT61_RS09775 b15807d0f3d7b99418145b7b54a2a4ad 237 SUPERFAMILY SSF53187 129 229 2.48E-32 T 22-04-2016 APT61_RS09775 b15807d0f3d7b99418145b7b54a2a4ad 237 SUPERFAMILY SSF53187 16 102 2.48E-32 T 22-04-2016 APT61_RS18700 4e6f267d6ae8fb8d63e46a9414c76a29 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 47 1.0E-4 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APT61_RS18700 4e6f267d6ae8fb8d63e46a9414c76a29 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 22-04-2016 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 APT61_RS18700 4e6f267d6ae8fb8d63e46a9414c76a29 50 Pfam PF01848 Hok/gef family 6 46 7.1E-20 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APT61_RS18700 4e6f267d6ae8fb8d63e46a9414c76a29 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 7.0E-15 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APT61_RS18700 4e6f267d6ae8fb8d63e46a9414c76a29 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 7.0E-15 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APT61_RS00200 8aec93c002a7236f13d373d0e2d947b7 460 Gene3D G3DSA:1.20.1250.20 30 209 5.5E-6 T 22-04-2016 APT61_RS00200 8aec93c002a7236f13d373d0e2d947b7 460 Gene3D G3DSA:1.20.1250.20 240 442 1.6E-12 T 22-04-2016 APT61_RS00200 8aec93c002a7236f13d373d0e2d947b7 460 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 69 96 - T 22-04-2016 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 APT61_RS00200 8aec93c002a7236f13d373d0e2d947b7 460 Pfam PF13347 MFS/sugar transport protein 20 443 1.3E-80 T 22-04-2016 APT61_RS00200 8aec93c002a7236f13d373d0e2d947b7 460 PANTHER PTHR11328 7 458 0.0 T 22-04-2016 APT61_RS00200 8aec93c002a7236f13d373d0e2d947b7 460 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 18 454 3.6E-158 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 APT61_RS00200 8aec93c002a7236f13d373d0e2d947b7 460 PANTHER PTHR11328:SF39 7 458 0.0 T 22-04-2016 APT61_RS00200 8aec93c002a7236f13d373d0e2d947b7 460 SUPERFAMILY SSF103473 20 443 2.88E-29 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11550 61efdfdb385e8863e1b966ba7bafd87f 265 PANTHER PTHR13774:SF17 1 265 9.2E-102 T 22-04-2016 APT61_RS11550 61efdfdb385e8863e1b966ba7bafd87f 265 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 237 1.3E-31 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APT61_RS11550 61efdfdb385e8863e1b966ba7bafd87f 265 PANTHER PTHR13774 1 265 9.2E-102 T 22-04-2016 APT61_RS11550 61efdfdb385e8863e1b966ba7bafd87f 265 PIRSF PIRSF016184 1 262 2.5E-50 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APT61_RS11550 61efdfdb385e8863e1b966ba7bafd87f 265 Gene3D G3DSA:3.10.310.10 3 128 2.8E-42 T 22-04-2016 APT61_RS11550 61efdfdb385e8863e1b966ba7bafd87f 265 SUPERFAMILY SSF54506 4 262 9.77E-77 T 22-04-2016 APT61_RS11550 61efdfdb385e8863e1b966ba7bafd87f 265 Gene3D G3DSA:3.10.310.10 129 250 1.2E-43 T 22-04-2016 APT61_RS11550 61efdfdb385e8863e1b966ba7bafd87f 265 Pfam PF02567 Phenazine biosynthesis-like protein 9 258 1.3E-52 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APT61_RS00690 005873e7f153348c55f960b0ad76550e 305 Gene3D G3DSA:3.40.190.10 90 175 3.1E-20 T 22-04-2016 APT61_RS00690 005873e7f153348c55f960b0ad76550e 305 SUPERFAMILY SSF53850 89 295 6.05E-48 T 22-04-2016 APT61_RS00690 005873e7f153348c55f960b0ad76550e 305 PANTHER PTHR30346:SF15 1 305 2.1E-155 T 22-04-2016 APT61_RS00690 005873e7f153348c55f960b0ad76550e 305 Gene3D G3DSA:1.10.10.10 1 84 4.3E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00690 005873e7f153348c55f960b0ad76550e 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS00690 005873e7f153348c55f960b0ad76550e 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS00690 005873e7f153348c55f960b0ad76550e 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS00690 005873e7f153348c55f960b0ad76550e 305 Pfam PF03466 LysR substrate binding domain 89 293 1.1E-54 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS00690 005873e7f153348c55f960b0ad76550e 305 SUPERFAMILY SSF46785 1 86 1.27E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00690 005873e7f153348c55f960b0ad76550e 305 PANTHER PTHR30346 1 305 2.1E-155 T 22-04-2016 APT61_RS00690 005873e7f153348c55f960b0ad76550e 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.1E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS00690 005873e7f153348c55f960b0ad76550e 305 Gene3D G3DSA:3.40.190.10 176 267 1.6E-37 T 22-04-2016 APT61_RS07235 8456f84c88712ff6d2769dd00da5d65b 278 Pfam PF00756 Putative esterase 21 271 4.3E-72 T 22-04-2016 IPR000801 Putative esterase APT61_RS07235 8456f84c88712ff6d2769dd00da5d65b 278 SUPERFAMILY SSF53474 1 276 2.7E-88 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS07235 8456f84c88712ff6d2769dd00da5d65b 278 PANTHER PTHR10061 1 278 3.4E-172 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 APT61_RS07235 8456f84c88712ff6d2769dd00da5d65b 278 Gene3D G3DSA:3.40.50.1820 1 276 4.5E-78 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS07235 8456f84c88712ff6d2769dd00da5d65b 278 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 276 9.4E-120 T 22-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 APT61_RS02860 f69134190dde508560eb69ea3db74e79 292 PANTHER PTHR30217 1 292 2.1E-211 T 22-04-2016 APT61_RS02860 f69134190dde508560eb69ea3db74e79 292 Pfam PF01136 Peptidase family U32 92 197 4.9E-11 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS02860 f69134190dde508560eb69ea3db74e79 292 PANTHER PTHR30217:SF8 1 292 2.1E-211 T 22-04-2016 APT61_RS00415 06fc36b9468bb35f0bdb5f91b759f182 500 Gene3D G3DSA:3.40.50.300 2 237 1.1E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00415 06fc36b9468bb35f0bdb5f91b759f182 500 SUPERFAMILY SSF52540 3 232 2.81E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00415 06fc36b9468bb35f0bdb5f91b759f182 500 PANTHER PTHR24220 6 379 1.4E-153 T 22-04-2016 APT61_RS00415 06fc36b9468bb35f0bdb5f91b759f182 500 SMART SM00382 279 473 1.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS00415 06fc36b9468bb35f0bdb5f91b759f182 500 SMART SM00382 29 225 4.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS00415 06fc36b9468bb35f0bdb5f91b759f182 500 Gene3D G3DSA:3.40.50.300 262 482 2.3E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00415 06fc36b9468bb35f0bdb5f91b759f182 500 Pfam PF00005 ABC transporter 20 171 4.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS00415 06fc36b9468bb35f0bdb5f91b759f182 500 Pfam PF00005 ABC transporter 271 424 3.4E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS00415 06fc36b9468bb35f0bdb5f91b759f182 500 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS00415 06fc36b9468bb35f0bdb5f91b759f182 500 SUPERFAMILY SSF52540 244 477 4.47E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS00415 06fc36b9468bb35f0bdb5f91b759f182 500 PANTHER PTHR24220:SF416 6 379 1.4E-153 T 22-04-2016 APT61_RS14085 b28704703739283fe8abe175e9c552b0 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site APT61_RS14085 b28704703739283fe8abe175e9c552b0 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 3.7E-51 T 22-04-2016 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 APT61_RS14085 b28704703739283fe8abe175e9c552b0 134 PANTHER PTHR30435:SF2 1 134 1.6E-67 T 22-04-2016 APT61_RS14085 b28704703739283fe8abe175e9c552b0 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 3.4E-12 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APT61_RS14085 b28704703739283fe8abe175e9c552b0 134 PANTHER PTHR30435 1 134 1.6E-67 T 22-04-2016 APT61_RS14085 b28704703739283fe8abe175e9c552b0 134 Pfam PF00460 Flagella basal body rod protein 7 37 1.7E-9 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APT61_RS02785 229cb22b2b82541bd25c2778f366b560 110 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 3.3E-43 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APT61_RS02785 229cb22b2b82541bd25c2778f366b560 110 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 3.3E-43 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APT61_RS02785 229cb22b2b82541bd25c2778f366b560 110 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 3.3E-43 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APT61_RS02785 229cb22b2b82541bd25c2778f366b560 110 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 3.3E-43 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APT61_RS02785 229cb22b2b82541bd25c2778f366b560 110 Pfam PF03840 Preprotein translocase SecG subunit 5 72 2.3E-22 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APT61_RS02785 229cb22b2b82541bd25c2778f366b560 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 1.6E-27 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 APT61_RS02785 229cb22b2b82541bd25c2778f366b560 110 PANTHER PTHR34182 2 110 3.4E-37 T 22-04-2016 APT61_RS17435 de699119e94e55e6c5f5087299160d09 149 Pfam PF03477 ATP cone domain 50 136 6.3E-15 T 22-04-2016 IPR005144 ATP-cone domain APT61_RS17435 de699119e94e55e6c5f5087299160d09 149 PANTHER PTHR30455 2 149 4.0E-75 T 22-04-2016 APT61_RS17435 de699119e94e55e6c5f5087299160d09 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 88.436 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APT61_RS17435 de699119e94e55e6c5f5087299160d09 149 PANTHER PTHR30455:SF2 2 149 4.0E-75 T 22-04-2016 APT61_RS17435 de699119e94e55e6c5f5087299160d09 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.8E-77 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 APT61_RS19440 bc40e761cc461cc1a9d379e815e798cf 361 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 330 3.6E-97 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS19440 bc40e761cc461cc1a9d379e815e798cf 361 Gene3D G3DSA:3.90.25.10 200 354 2.3E-56 T 22-04-2016 APT61_RS19440 bc40e761cc461cc1a9d379e815e798cf 361 PANTHER PTHR10366:SF41 2 357 1.3E-188 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APT61_RS19440 bc40e761cc461cc1a9d379e815e798cf 361 PANTHER PTHR10366 2 357 1.3E-188 T 22-04-2016 APT61_RS19440 bc40e761cc461cc1a9d379e815e798cf 361 Gene3D G3DSA:3.40.50.720 1 199 2.5E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS19440 bc40e761cc461cc1a9d379e815e798cf 361 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 344 2.6E-155 T 22-04-2016 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688 APT61_RS19440 bc40e761cc461cc1a9d379e815e798cf 361 SUPERFAMILY SSF51735 1 355 9.93E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02025 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 PIRSF PIRSF002122 3 156 1.2E-63 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APT61_RS02025 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 PANTHER PTHR11205 1 156 5.8E-96 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 APT61_RS02025 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 Gene3D G3DSA:1.10.455.10 8 156 1.2E-67 T 22-04-2016 IPR023798 Ribosomal protein S7 domain APT61_RS02025 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 APT61_RS02025 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.7E-71 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APT61_RS02025 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 SUPERFAMILY SSF47973 6 149 2.75E-60 T 22-04-2016 IPR023798 Ribosomal protein S7 domain APT61_RS02025 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 7.5E-65 T 22-04-2016 IPR023798 Ribosomal protein S7 domain APT61_RS02025 b9447ac7dbf3ab22086d7a5a7a5f60e4 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.334 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 APT61_RS05640 c1bc4ef6015100ddf4c752218f798980 290 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 14 254 6.8E-73 T 22-04-2016 IPR013658 SMP-30/Gluconolactonase/LRE-like region APT61_RS05640 c1bc4ef6015100ddf4c752218f798980 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 15 32 3.4E-20 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) APT61_RS05640 c1bc4ef6015100ddf4c752218f798980 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 194 211 3.4E-20 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) APT61_RS05640 c1bc4ef6015100ddf4c752218f798980 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 236 254 3.4E-20 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) APT61_RS05640 c1bc4ef6015100ddf4c752218f798980 290 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 91 112 3.4E-20 T 22-04-2016 IPR005511 Senescence marker protein-30 (SMP-30) APT61_RS05640 c1bc4ef6015100ddf4c752218f798980 290 SUPERFAMILY SSF63829 4 283 2.62E-60 T 22-04-2016 APT61_RS05640 c1bc4ef6015100ddf4c752218f798980 290 Gene3D G3DSA:2.120.10.30 5 287 7.9E-80 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APT61_RS05640 c1bc4ef6015100ddf4c752218f798980 290 PANTHER PTHR10907:SF47 14 287 1.8E-75 T 22-04-2016 APT61_RS05640 c1bc4ef6015100ddf4c752218f798980 290 PANTHER PTHR10907 14 287 1.8E-75 T 22-04-2016 APT61_RS20790 103354ca3b1bc00c6ca4545d2072cb20 549 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 63 466 2.1E-63 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS20790 103354ca3b1bc00c6ca4545d2072cb20 549 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 1 549 57.567 T 22-04-2016 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 APT61_RS20790 103354ca3b1bc00c6ca4545d2072cb20 549 Pfam PF00474 Sodium:solute symporter family 63 468 8.4E-135 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS20790 103354ca3b1bc00c6ca4545d2072cb20 549 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 178 203 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APT61_RS20790 103354ca3b1bc00c6ca4545d2072cb20 549 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 2 549 0.0 T 22-04-2016 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 APT61_RS20790 103354ca3b1bc00c6ca4545d2072cb20 549 PANTHER PTHR11819 32 538 1.2E-290 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS20790 103354ca3b1bc00c6ca4545d2072cb20 549 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 450 470 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APT61_RS20790 103354ca3b1bc00c6ca4545d2072cb20 549 PANTHER PTHR11819:SF13 32 538 1.2E-290 T 22-04-2016 APT61_RS16525 06722f8b99e77dac9a14c18e49aea8fd 386 Gene3D G3DSA:3.90.1150.10 273 384 7.3E-22 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS16525 06722f8b99e77dac9a14c18e49aea8fd 386 Pfam PF00155 Aminotransferase class I and II 32 381 2.1E-59 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS16525 06722f8b99e77dac9a14c18e49aea8fd 386 PANTHER PTHR11751:SF301 11 386 3.5E-152 T 22-04-2016 APT61_RS16525 06722f8b99e77dac9a14c18e49aea8fd 386 Gene3D G3DSA:3.40.640.10 45 272 4.5E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS16525 06722f8b99e77dac9a14c18e49aea8fd 386 PANTHER PTHR11751 11 386 3.5E-152 T 22-04-2016 APT61_RS16525 06722f8b99e77dac9a14c18e49aea8fd 386 SUPERFAMILY SSF53383 11 385 4.76E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS16130 6232c162f5505c65274eb04ad00f57a3 428 Gene3D G3DSA:1.10.580.10 52 280 6.8E-97 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 APT61_RS16130 6232c162f5505c65274eb04ad00f57a3 428 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 22-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 APT61_RS16130 6232c162f5505c65274eb04ad00f57a3 428 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 2.9E-133 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APT61_RS16130 6232c162f5505c65274eb04ad00f57a3 428 Gene3D G3DSA:1.10.230.10 281 373 3.1E-43 T 22-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain APT61_RS16130 6232c162f5505c65274eb04ad00f57a3 428 PIRSF PIRSF001369 38 428 2.5E-176 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 APT61_RS16130 6232c162f5505c65274eb04ad00f57a3 428 SUPERFAMILY SSF48256 8 421 2.36E-168 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APT61_RS16130 6232c162f5505c65274eb04ad00f57a3 428 PANTHER PTHR11739 39 422 2.3E-203 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APT61_RS16130 6232c162f5505c65274eb04ad00f57a3 428 PRINTS PR00143 Citrate synthase signature 165 178 5.2E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APT61_RS16130 6232c162f5505c65274eb04ad00f57a3 428 PRINTS PR00143 Citrate synthase signature 241 269 5.2E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APT61_RS16130 6232c162f5505c65274eb04ad00f57a3 428 PRINTS PR00143 Citrate synthase signature 296 316 5.2E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APT61_RS16130 6232c162f5505c65274eb04ad00f57a3 428 PRINTS PR00143 Citrate synthase signature 219 234 5.2E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APT61_RS16130 6232c162f5505c65274eb04ad00f57a3 428 PRINTS PR00143 Citrate synthase signature 379 393 5.2E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APT61_RS16130 6232c162f5505c65274eb04ad00f57a3 428 PRINTS PR00143 Citrate synthase signature 359 375 5.2E-56 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 APT61_RS16130 6232c162f5505c65274eb04ad00f57a3 428 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 421 6.2E-243 T 22-04-2016 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 UniPathway: UPA00223 APT61_RS00930 925d185a21de25ea0bd2578000be1d55 401 SUPERFAMILY SSF103473 15 397 1.7E-13 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS00930 925d185a21de25ea0bd2578000be1d55 401 Gene3D G3DSA:1.20.1250.20 15 192 4.1E-5 T 22-04-2016 APT61_RS06595 2aac5a91492b1b5ef80019ef0675f39a 442 SUPERFAMILY SSF56935 28 442 3.25E-107 T 22-04-2016 APT61_RS06595 2aac5a91492b1b5ef80019ef0675f39a 442 PANTHER PTHR35093:SF3 5 442 2.1E-267 T 22-04-2016 APT61_RS06595 2aac5a91492b1b5ef80019ef0675f39a 442 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 19 442 4.1E-147 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) APT61_RS06595 2aac5a91492b1b5ef80019ef0675f39a 442 PANTHER PTHR35093 5 442 2.1E-267 T 22-04-2016 APT61_RS06595 2aac5a91492b1b5ef80019ef0675f39a 442 Gene3D G3DSA:2.40.160.60 28 442 3.3E-138 T 22-04-2016 APT61_RS15395 69f6ddd6e4ca25963df7954b93715180 184 Pfam PF09998 Uncharacterized protein conserved in bacteria (DUF2239) 6 180 3.2E-64 T 22-04-2016 IPR018715 Protein of unknown function DUF2239 APT61_RS00430 e70666e7766f9c24917ed21ae102bdad 419 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 419 276.968 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 APT61_RS00430 e70666e7766f9c24917ed21ae102bdad 419 SUPERFAMILY SSF51658 4 418 2.71E-84 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS00430 e70666e7766f9c24917ed21ae102bdad 419 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 9 418 0.0 T 22-04-2016 APT61_RS00430 e70666e7766f9c24917ed21ae102bdad 419 PANTHER PTHR30268 1 419 4.6E-224 T 22-04-2016 APT61_RS00430 e70666e7766f9c24917ed21ae102bdad 419 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 5 418 4.0E-243 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 APT61_RS00430 e70666e7766f9c24917ed21ae102bdad 419 Pfam PF06134 L-rhamnose isomerase (RhaA) 3 418 2.3E-233 T 22-04-2016 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14|UniPathway: UPA00541 APT61_RS00430 e70666e7766f9c24917ed21ae102bdad 419 Gene3D G3DSA:3.20.20.150 2 418 7.7E-226 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS09950 1a0d5fa59355a436b75a035669c28d75 137 SUPERFAMILY SSF51316 2 118 1.78E-31 T 22-04-2016 IPR011057 Mss4-like APT61_RS09950 1a0d5fa59355a436b75a035669c28d75 137 Gene3D G3DSA:3.90.1590.10 4 105 3.0E-21 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 APT61_RS09950 1a0d5fa59355a436b75a035669c28d75 137 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 105 2.1E-8 T 22-04-2016 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801|UniPathway: UPA00562 APT61_RS09950 1a0d5fa59355a436b75a035669c28d75 137 PANTHER PTHR28620 9 119 7.2E-40 T 22-04-2016 APT61_RS20400 ef0a7009d38b2ad2a707e14332a9d3e1 322 Pfam PF02666 Phosphatidylserine decarboxylase 63 271 3.3E-58 T 22-04-2016 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APT61_RS20400 ef0a7009d38b2ad2a707e14332a9d3e1 322 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 51.054 T 22-04-2016 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APT61_RS20400 ef0a7009d38b2ad2a707e14332a9d3e1 322 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 286 3.2E-100 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APT61_RS20400 ef0a7009d38b2ad2a707e14332a9d3e1 322 PANTHER PTHR10067 1 294 2.2E-120 T 22-04-2016 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|UniPathway: UPA00558 APT61_RS19800 a0241cb94e188605b0e24c9bc5c670a6 306 SUPERFAMILY SSF53335 89 189 2.4E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS19800 a0241cb94e188605b0e24c9bc5c670a6 306 SUPERFAMILY SSF53335 222 301 2.4E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS19800 a0241cb94e188605b0e24c9bc5c670a6 306 SUPERFAMILY SSF53335 13 45 2.4E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS19800 a0241cb94e188605b0e24c9bc5c670a6 306 Pfam PF01555 DNA methylase 32 296 1.4E-43 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 APT61_RS19800 a0241cb94e188605b0e24c9bc5c670a6 306 PANTHER PTHR13370 80 305 3.2E-43 T 22-04-2016 APT61_RS19800 a0241cb94e188605b0e24c9bc5c670a6 306 PANTHER PTHR13370 15 41 3.2E-43 T 22-04-2016 APT61_RS19800 a0241cb94e188605b0e24c9bc5c670a6 306 Gene3D G3DSA:3.40.50.150 13 299 7.9E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS19800 a0241cb94e188605b0e24c9bc5c670a6 306 PANTHER PTHR13370:SF4 80 305 3.2E-43 T 22-04-2016 APT61_RS19800 a0241cb94e188605b0e24c9bc5c670a6 306 PANTHER PTHR13370:SF4 15 41 3.2E-43 T 22-04-2016 APT61_RS19800 a0241cb94e188605b0e24c9bc5c670a6 306 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 31 45 1.5E-30 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APT61_RS19800 a0241cb94e188605b0e24c9bc5c670a6 306 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 280 300 1.5E-30 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APT61_RS19800 a0241cb94e188605b0e24c9bc5c670a6 306 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 238 255 1.5E-30 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APT61_RS19800 a0241cb94e188605b0e24c9bc5c670a6 306 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 101 121 1.5E-30 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APT61_RS19800 a0241cb94e188605b0e24c9bc5c670a6 306 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 257 275 1.5E-30 T 22-04-2016 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 APT61_RS05610 c2c640099b77b8bbb22f80ccff97f6ba 455 PANTHER PTHR34219 5 440 1.3E-78 T 22-04-2016 APT61_RS05610 c2c640099b77b8bbb22f80ccff97f6ba 455 Pfam PF03929 PepSY-associated TM region 15 385 6.2E-53 T 22-04-2016 IPR005625 PepSY-associated TM protein APT61_RS05610 c2c640099b77b8bbb22f80ccff97f6ba 455 PANTHER PTHR34219:SF1 5 440 1.3E-78 T 22-04-2016 APT61_RS17230 4e8cb6b2ab8aa4df992f9ea53a7326b6 103 PANTHER PTHR10815 1 102 7.1E-52 T 22-04-2016 APT61_RS17230 4e8cb6b2ab8aa4df992f9ea53a7326b6 103 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 6 76 2.8E-15 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APT61_RS17230 4e8cb6b2ab8aa4df992f9ea53a7326b6 103 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 7 86 1.2E-26 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APT61_RS17230 4e8cb6b2ab8aa4df992f9ea53a7326b6 103 Gene3D G3DSA:1.10.10.10 5 89 2.1E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17230 4e8cb6b2ab8aa4df992f9ea53a7326b6 103 SUPERFAMILY SSF46767 5 87 3.79E-26 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 APT61_RS17230 4e8cb6b2ab8aa4df992f9ea53a7326b6 103 PANTHER PTHR10815:SF2 1 102 7.1E-52 T 22-04-2016 APT61_RS01385 903c814aea4db141eb22585027414c4e 453 Gene3D G3DSA:3.30.300.30 345 451 1.7E-12 T 22-04-2016 APT61_RS01385 903c814aea4db141eb22585027414c4e 453 SUPERFAMILY SSF56801 15 451 1.01E-48 T 22-04-2016 APT61_RS01385 903c814aea4db141eb22585027414c4e 453 Gene3D G3DSA:3.40.50.980 17 142 2.0E-6 T 22-04-2016 APT61_RS01385 903c814aea4db141eb22585027414c4e 453 Gene3D G3DSA:3.40.50.980 143 286 2.8E-8 T 22-04-2016 APT61_RS01385 903c814aea4db141eb22585027414c4e 453 Pfam PF00501 AMP-binding enzyme 131 307 2.0E-5 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 APT61_RS04365 1a7953622a80abaa0209d1c5bbb7224a 445 PANTHER PTHR33989 1 444 1.0E-141 T 22-04-2016 APT61_RS04365 1a7953622a80abaa0209d1c5bbb7224a 445 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 14 428 4.0E-108 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 APT61_RS04365 1a7953622a80abaa0209d1c5bbb7224a 445 PIRSF PIRSF006351 1 443 1.4E-132 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 APT61_RS04365 1a7953622a80abaa0209d1c5bbb7224a 445 Pfam PF02378 Phosphotransferase system, EIIC 29 360 1.2E-43 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS04365 1a7953622a80abaa0209d1c5bbb7224a 445 PANTHER PTHR33989:SF4 1 444 1.0E-141 T 22-04-2016 APT61_RS20860 1a75664b9bc659a1941e56fc010f5c86 93 Pfam PF15940 Family of unknown function 1 90 6.6E-42 T 22-04-2016 IPR016958 Uncharacterised conserved protein UCP030798 APT61_RS20860 1a75664b9bc659a1941e56fc010f5c86 93 PIRSF PIRSF030798 1 93 6.2E-44 T 22-04-2016 IPR016958 Uncharacterised conserved protein UCP030798 APT61_RS20860 1a75664b9bc659a1941e56fc010f5c86 93 ProDom PD064934 YJCB MEMBRANE INNER ECS5042 21 93 4.0E-27 T 22-04-2016 IPR016958 Uncharacterised conserved protein UCP030798 APT61_RS19705 d04209a62af9863b3c5f49087ae1562c 536 PANTHER PTHR23513:SF7 8 439 1.4E-131 T 22-04-2016 APT61_RS19705 d04209a62af9863b3c5f49087ae1562c 536 PANTHER PTHR23513 8 439 1.4E-131 T 22-04-2016 APT61_RS19705 d04209a62af9863b3c5f49087ae1562c 536 Pfam PF05977 Transmembrane secretion effector 18 533 7.7E-178 T 22-04-2016 IPR010290 Transmembrane secretion effector APT61_RS19705 d04209a62af9863b3c5f49087ae1562c 536 SUPERFAMILY SSF103473 24 413 3.79E-50 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS19705 d04209a62af9863b3c5f49087ae1562c 536 Gene3D G3DSA:1.20.1250.20 25 210 1.1E-24 T 22-04-2016 APT61_RS19705 d04209a62af9863b3c5f49087ae1562c 536 Gene3D G3DSA:1.20.1250.20 239 412 1.2E-16 T 22-04-2016 APT61_RS16855 589f0297a33e42757294b0a76b11fdd3 123 SUPERFAMILY SSF142906 11 119 9.55E-37 T 22-04-2016 APT61_RS16855 589f0297a33e42757294b0a76b11fdd3 123 Pfam PF04237 YjbR 15 106 1.2E-20 T 22-04-2016 IPR007351 Uncharacterised protein YjbR APT61_RS16855 589f0297a33e42757294b0a76b11fdd3 123 PANTHER PTHR35145 1 122 1.5E-73 T 22-04-2016 APT61_RS16855 589f0297a33e42757294b0a76b11fdd3 123 PANTHER PTHR35145:SF2 1 122 1.5E-73 T 22-04-2016 APT61_RS05705 562485e2d196454a6842b2b259c1c971 435 PANTHER PTHR23508 19 434 0.0 T 22-04-2016 APT61_RS05705 562485e2d196454a6842b2b259c1c971 435 Gene3D G3DSA:1.20.1250.20 15 230 3.5E-25 T 22-04-2016 APT61_RS05705 562485e2d196454a6842b2b259c1c971 435 Gene3D G3DSA:1.20.1250.20 234 431 4.6E-21 T 22-04-2016 APT61_RS05705 562485e2d196454a6842b2b259c1c971 435 ProSitePatterns PS00217 Sugar transport proteins signature 2. 136 161 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS05705 562485e2d196454a6842b2b259c1c971 435 Pfam PF00083 Sugar (and other) transporter 27 226 1.3E-25 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APT61_RS05705 562485e2d196454a6842b2b259c1c971 435 Pfam PF00083 Sugar (and other) transporter 228 422 4.0E-13 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APT61_RS05705 562485e2d196454a6842b2b259c1c971 435 ProSitePatterns PS00216 Sugar transport proteins signature 1. 302 319 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS05705 562485e2d196454a6842b2b259c1c971 435 SUPERFAMILY SSF103473 21 434 5.1E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS05705 562485e2d196454a6842b2b259c1c971 435 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 33 420 1.9E-141 T 22-04-2016 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 APT61_RS05705 562485e2d196454a6842b2b259c1c971 435 PANTHER PTHR23508:SF12 19 434 0.0 T 22-04-2016 APT61_RS16700 2eb825ab713b65cea56b7838dee49f2a 362 PANTHER PTHR32196 10 361 4.3E-137 T 22-04-2016 APT61_RS16700 2eb825ab713b65cea56b7838dee49f2a 362 PANTHER PTHR32196:SF21 10 361 4.3E-137 T 22-04-2016 APT61_RS16700 2eb825ab713b65cea56b7838dee49f2a 362 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 337 4.7E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS11125 5a2c61b88712d52166cb604c049b61ed 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 60 7.6E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS11125 5a2c61b88712d52166cb604c049b61ed 197 PANTHER PTHR30055:SF71 1 101 5.4E-21 T 22-04-2016 APT61_RS11125 5a2c61b88712d52166cb604c049b61ed 197 Gene3D G3DSA:1.10.357.10 5 168 3.2E-20 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS11125 5a2c61b88712d52166cb604c049b61ed 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 6.2E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS11125 5a2c61b88712d52166cb604c049b61ed 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 6.2E-5 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS11125 5a2c61b88712d52166cb604c049b61ed 197 SUPERFAMILY SSF46689 4 76 1.69E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS11125 5a2c61b88712d52166cb604c049b61ed 197 PANTHER PTHR30055 1 101 5.4E-21 T 22-04-2016 APT61_RS13185 6d1d479b840e9cd8f50de3f23074bd17 269 Gene3D G3DSA:3.60.10.10 1 267 1.0E-86 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APT61_RS13185 6d1d479b840e9cd8f50de3f23074bd17 269 SUPERFAMILY SSF56219 1 267 3.4E-87 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APT61_RS13185 6d1d479b840e9cd8f50de3f23074bd17 269 PANTHER PTHR22748 1 268 1.0E-137 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APT61_RS13185 6d1d479b840e9cd8f50de3f23074bd17 269 PANTHER PTHR22748:SF7 1 268 1.0E-137 T 22-04-2016 APT61_RS13185 6d1d479b840e9cd8f50de3f23074bd17 269 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 1.4E-92 T 22-04-2016 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 APT61_RS13185 6d1d479b840e9cd8f50de3f23074bd17 269 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 22-04-2016 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APT61_RS13185 6d1d479b840e9cd8f50de3f23074bd17 269 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 197 213 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APT61_RS13185 6d1d479b840e9cd8f50de3f23074bd17 269 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 5.6E-108 T 22-04-2016 APT61_RS13185 6d1d479b840e9cd8f50de3f23074bd17 269 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 22-04-2016 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 APT61_RS13185 6d1d479b840e9cd8f50de3f23074bd17 269 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 3.1E-29 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APT61_RS03155 84a45074e0fa37b8b987e75e3fd85ec2 519 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 173 1.6E-17 T 22-04-2016 IPR024478 4HB MCP domain APT61_RS03155 84a45074e0fa37b8b987e75e3fd85ec2 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 3.94E-53 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS03155 84a45074e0fa37b8b987e75e3fd85ec2 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 3.94E-53 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS03155 84a45074e0fa37b8b987e75e3fd85ec2 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 3.94E-53 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS03155 84a45074e0fa37b8b987e75e3fd85ec2 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 3.94E-53 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS03155 84a45074e0fa37b8b987e75e3fd85ec2 519 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 3.94E-53 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS03155 84a45074e0fa37b8b987e75e3fd85ec2 519 PANTHER PTHR32089:SF63 67 515 3.0E-145 T 22-04-2016 APT61_RS03155 84a45074e0fa37b8b987e75e3fd85ec2 519 SUPERFAMILY SSF58104 232 515 7.32E-68 T 22-04-2016 APT61_RS03155 84a45074e0fa37b8b987e75e3fd85ec2 519 Pfam PF00672 HAMP domain 192 259 1.7E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS03155 84a45074e0fa37b8b987e75e3fd85ec2 519 SMART SM00283 265 512 5.5E-77 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS03155 84a45074e0fa37b8b987e75e3fd85ec2 519 Gene3D G3DSA:1.10.287.950 280 484 3.7E-54 T 22-04-2016 APT61_RS03155 84a45074e0fa37b8b987e75e3fd85ec2 519 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 326 511 1.3E-51 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS03155 84a45074e0fa37b8b987e75e3fd85ec2 519 PANTHER PTHR32089 67 515 3.0E-145 T 22-04-2016 APT61_RS03155 84a45074e0fa37b8b987e75e3fd85ec2 519 SMART SM00304 212 264 3.4E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS07375 2c4d5d9293a3e8e854c706e4397defaa 385 PANTHER PTHR30177 89 379 9.9E-161 T 22-04-2016 APT61_RS07375 2c4d5d9293a3e8e854c706e4397defaa 385 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 195 383 3.0E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07375 2c4d5d9293a3e8e854c706e4397defaa 385 Gene3D G3DSA:1.10.3720.10 166 368 2.9E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07375 2c4d5d9293a3e8e854c706e4397defaa 385 PANTHER PTHR30177:SF8 89 379 9.9E-161 T 22-04-2016 APT61_RS07375 2c4d5d9293a3e8e854c706e4397defaa 385 SUPERFAMILY SSF161098 172 371 4.06E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS08930 a645ef65b41e4bae94c2031b8c58910f 577 PANTHER PTHR32507:SF7 1 576 5.0E-298 T 22-04-2016 IPR030151 K(+)/H(+) antiporter NhaP GO:0005451|GO:0006813|GO:0016021 APT61_RS08930 a645ef65b41e4bae94c2031b8c58910f 577 Pfam PF03471 Transporter associated domain 493 571 1.3E-10 T 22-04-2016 IPR005170 Transporter-associated domain APT61_RS08930 a645ef65b41e4bae94c2031b8c58910f 577 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 576 49.487 T 22-04-2016 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 APT61_RS08930 a645ef65b41e4bae94c2031b8c58910f 577 Gene3D G3DSA:3.30.70.1450 420 483 4.6E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS08930 a645ef65b41e4bae94c2031b8c58910f 577 SUPERFAMILY SSF116726 418 483 5.62E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS08930 a645ef65b41e4bae94c2031b8c58910f 577 Pfam PF02080 TrkA-C domain 421 483 1.1E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS08930 a645ef65b41e4bae94c2031b8c58910f 577 SMART SM01091 492 573 5.7E-14 T 22-04-2016 IPR005170 Transporter-associated domain APT61_RS08930 a645ef65b41e4bae94c2031b8c58910f 577 Pfam PF00999 Sodium/hydrogen exchanger family 15 388 2.3E-57 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 APT61_RS08930 a645ef65b41e4bae94c2031b8c58910f 577 PANTHER PTHR32507 1 576 5.0E-298 T 22-04-2016 APT61_RS08930 a645ef65b41e4bae94c2031b8c58910f 577 SUPERFAMILY SSF56176 497 571 1.31E-9 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APT61_RS08930 a645ef65b41e4bae94c2031b8c58910f 577 Gene3D G3DSA:3.30.465.10 497 571 5.1E-10 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APT61_RS01565 485f1476a921a4aaf908fbab9653ee27 356 SMART SM00382 29 212 1.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS01565 485f1476a921a4aaf908fbab9653ee27 356 SUPERFAMILY SSF50331 237 355 8.26E-29 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APT61_RS01565 485f1476a921a4aaf908fbab9653ee27 356 SUPERFAMILY SSF52540 4 243 1.82E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01565 485f1476a921a4aaf908fbab9653ee27 356 Gene3D G3DSA:2.40.50.100 342 356 7.8E-9 T 22-04-2016 APT61_RS01565 485f1476a921a4aaf908fbab9653ee27 356 Gene3D G3DSA:2.40.50.100 240 282 7.8E-9 T 22-04-2016 APT61_RS01565 485f1476a921a4aaf908fbab9653ee27 356 Pfam PF08402 TOBE domain 278 348 1.5E-9 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APT61_RS01565 485f1476a921a4aaf908fbab9653ee27 356 Gene3D G3DSA:3.40.50.300 4 235 5.4E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS01565 485f1476a921a4aaf908fbab9653ee27 356 PANTHER PTHR24220 5 292 9.9E-167 T 22-04-2016 APT61_RS01565 485f1476a921a4aaf908fbab9653ee27 356 Gene3D G3DSA:2.40.50.140 283 341 1.2E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS01565 485f1476a921a4aaf908fbab9653ee27 356 PANTHER PTHR24220:SF151 5 292 9.9E-167 T 22-04-2016 APT61_RS01565 485f1476a921a4aaf908fbab9653ee27 356 Pfam PF00005 ABC transporter 21 162 8.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS01565 485f1476a921a4aaf908fbab9653ee27 356 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS08590 3c37194573ba45b13b5fe8fe94443f00 314 SUPERFAMILY SSF53807 27 312 1.77E-76 T 22-04-2016 APT61_RS08590 3c37194573ba45b13b5fe8fe94443f00 314 PANTHER PTHR30477:SF1 132 298 6.5E-95 T 22-04-2016 APT61_RS08590 3c37194573ba45b13b5fe8fe94443f00 314 PANTHER PTHR30477:SF1 4 115 6.5E-95 T 22-04-2016 APT61_RS08590 3c37194573ba45b13b5fe8fe94443f00 314 PANTHER PTHR30477 132 298 6.5E-95 T 22-04-2016 APT61_RS08590 3c37194573ba45b13b5fe8fe94443f00 314 PANTHER PTHR30477 4 115 6.5E-95 T 22-04-2016 APT61_RS08590 3c37194573ba45b13b5fe8fe94443f00 314 Gene3D G3DSA:3.40.50.1980 202 312 4.0E-31 T 22-04-2016 APT61_RS08590 3c37194573ba45b13b5fe8fe94443f00 314 Gene3D G3DSA:3.40.50.1980 16 201 2.7E-46 T 22-04-2016 APT61_RS08590 3c37194573ba45b13b5fe8fe94443f00 314 Pfam PF01297 Zinc-uptake complex component A periplasmic 28 310 6.6E-58 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 APT61_RS15580 b5545ad29c9b736845e9664914c9292e 810 Pfam PF01228 Glycine radical 688 791 5.4E-30 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 APT61_RS15580 b5545ad29c9b736845e9664914c9292e 810 Pfam PF02901 Pyruvate formate lyase-like 10 671 2.8E-209 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 APT61_RS15580 b5545ad29c9b736845e9664914c9292e 810 PANTHER PTHR30191:SF6 6 810 0.0 T 22-04-2016 APT61_RS15580 b5545ad29c9b736845e9664914c9292e 810 PIRSF PIRSF000379 32 810 1.5E-192 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APT61_RS15580 b5545ad29c9b736845e9664914c9292e 810 SUPERFAMILY SSF51998 3 809 2.2E-229 T 22-04-2016 APT61_RS15580 b5545ad29c9b736845e9664914c9292e 810 PANTHER PTHR30191 6 810 0.0 T 22-04-2016 APT61_RS15580 b5545ad29c9b736845e9664914c9292e 810 Gene3D G3DSA:3.20.70.20 8 809 5.8E-266 T 22-04-2016 APT61_RS15580 b5545ad29c9b736845e9664914c9292e 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site APT61_RS15580 b5545ad29c9b736845e9664914c9292e 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 8 810 0.0 T 22-04-2016 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 APT61_RS14630 b40affe464ede4fc4ebed185cf6e74cc 359 PANTHER PTHR24220 5 288 4.7E-129 T 22-04-2016 APT61_RS14630 b40affe464ede4fc4ebed185cf6e74cc 359 Gene3D G3DSA:3.40.50.300 2 242 1.9E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14630 b40affe464ede4fc4ebed185cf6e74cc 359 SMART SM00382 30 227 6.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS14630 b40affe464ede4fc4ebed185cf6e74cc 359 Pfam PF00005 ABC transporter 21 169 4.6E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS14630 b40affe464ede4fc4ebed185cf6e74cc 359 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS14630 b40affe464ede4fc4ebed185cf6e74cc 359 SUPERFAMILY SSF52540 4 251 7.01E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14630 b40affe464ede4fc4ebed185cf6e74cc 359 PANTHER PTHR24220:SF151 5 288 4.7E-129 T 22-04-2016 APT61_RS14630 b40affe464ede4fc4ebed185cf6e74cc 359 SUPERFAMILY SSF50331 244 351 6.8E-9 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APT61_RS20135 8a6f6129557e368c9c7f6a8f5dd2c483 429 Pfam PF02040 Arsenical pump membrane protein 5 421 5.5E-156 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 APT61_RS20135 8a6f6129557e368c9c7f6a8f5dd2c483 429 PANTHER PTHR10283 4 427 5.4E-158 T 22-04-2016 APT61_RS20135 8a6f6129557e368c9c7f6a8f5dd2c483 429 PANTHER PTHR10283:SF21 4 427 5.4E-158 T 22-04-2016 APT61_RS20135 8a6f6129557e368c9c7f6a8f5dd2c483 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 426 1.8E-211 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 APT61_RS20135 8a6f6129557e368c9c7f6a8f5dd2c483 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 5.8E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 APT61_RS20135 8a6f6129557e368c9c7f6a8f5dd2c483 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 5.8E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 APT61_RS20135 8a6f6129557e368c9c7f6a8f5dd2c483 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 5.8E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 APT61_RS20135 8a6f6129557e368c9c7f6a8f5dd2c483 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 5.8E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 APT61_RS20135 8a6f6129557e368c9c7f6a8f5dd2c483 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 5.8E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 APT61_RS20135 8a6f6129557e368c9c7f6a8f5dd2c483 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 5.8E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 APT61_RS20135 8a6f6129557e368c9c7f6a8f5dd2c483 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 5.8E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 APT61_RS20135 8a6f6129557e368c9c7f6a8f5dd2c483 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 5.8E-123 T 22-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 APT61_RS12860 f186656bf5f6b825d8920d2b365f3312 222 SUPERFAMILY SSF161098 11 208 3.79E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS12860 f186656bf5f6b825d8920d2b365f3312 222 Gene3D G3DSA:1.10.3720.10 11 220 1.5E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS12860 f186656bf5f6b825d8920d2b365f3312 222 PANTHER PTHR30450 1 222 5.4E-120 T 22-04-2016 APT61_RS12860 f186656bf5f6b825d8920d2b365f3312 222 PANTHER PTHR30450:SF1 1 222 5.4E-120 T 22-04-2016 APT61_RS12860 f186656bf5f6b825d8920d2b365f3312 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 222 3.4E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10640 77da678f787973885f76b2c7f2e5a868 336 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 325 2.6E-98 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APT61_RS10640 77da678f787973885f76b2c7f2e5a868 336 PANTHER PTHR30365 1 336 1.3E-171 T 22-04-2016 APT61_RS10640 77da678f787973885f76b2c7f2e5a868 336 PANTHER PTHR30365:SF4 1 336 1.3E-171 T 22-04-2016 APT61_RS10640 77da678f787973885f76b2c7f2e5a868 336 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 330 5.6E-47 T 22-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 APT61_RS10670 5a29c90efef97b42c3499108aafc8d77 381 Pfam PF13416 Bacterial extracellular solute-binding protein 56 325 5.8E-29 T 22-04-2016 APT61_RS10670 5a29c90efef97b42c3499108aafc8d77 381 PANTHER PTHR30222:SF5 1 327 5.2E-79 T 22-04-2016 APT61_RS10670 5a29c90efef97b42c3499108aafc8d77 381 Gene3D G3DSA:3.40.190.10 147 299 1.1E-29 T 22-04-2016 APT61_RS10670 5a29c90efef97b42c3499108aafc8d77 381 PANTHER PTHR30222 1 327 5.2E-79 T 22-04-2016 APT61_RS10670 5a29c90efef97b42c3499108aafc8d77 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 136 152 4.2E-8 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS10670 5a29c90efef97b42c3499108aafc8d77 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 276 295 4.2E-8 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS10670 5a29c90efef97b42c3499108aafc8d77 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 62 83 4.2E-8 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 APT61_RS10670 5a29c90efef97b42c3499108aafc8d77 381 Gene3D G3DSA:3.40.190.10 300 327 1.5E-29 T 22-04-2016 APT61_RS10670 5a29c90efef97b42c3499108aafc8d77 381 Gene3D G3DSA:3.40.190.10 34 145 1.5E-29 T 22-04-2016 APT61_RS10670 5a29c90efef97b42c3499108aafc8d77 381 SUPERFAMILY SSF53850 33 339 8.03E-57 T 22-04-2016 APT61_RS09995 1e436cf1ecd3ec704ebf60ddc021a61a 63 Pfam PF13617 YnbE-like lipoprotein 10 61 3.3E-28 T 22-04-2016 IPR025985 YnbE-like lipoprotein APT61_RS09995 1e436cf1ecd3ec704ebf60ddc021a61a 63 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 16 63 2.0E-18 T 22-04-2016 APT61_RS04085 49853f973f542fba48ecb92a5ed39a07 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 1.1E-57 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS04085 49853f973f542fba48ecb92a5ed39a07 219 Gene3D G3DSA:3.40.50.1360 1 136 1.7E-58 T 22-04-2016 APT61_RS04085 49853f973f542fba48ecb92a5ed39a07 219 PANTHER PTHR11934 1 219 2.9E-146 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS04085 49853f973f542fba48ecb92a5ed39a07 219 Gene3D G3DSA:3.30.70.260 137 196 9.1E-29 T 22-04-2016 APT61_RS04085 49853f973f542fba48ecb92a5ed39a07 219 PANTHER PTHR11934:SF11 1 219 2.9E-146 T 22-04-2016 APT61_RS04085 49853f973f542fba48ecb92a5ed39a07 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 1.7E-70 T 22-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS04085 49853f973f542fba48ecb92a5ed39a07 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.012 T 22-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS04085 49853f973f542fba48ecb92a5ed39a07 219 SUPERFAMILY SSF100950 2 146 1.3E-46 T 22-04-2016 APT61_RS04085 49853f973f542fba48ecb92a5ed39a07 219 SUPERFAMILY SSF75445 127 198 2.49E-23 T 22-04-2016 APT61_RS19900 64576256c275522295447f16072a8cb7 43 Pfam PF08052 PyrBI operon leader peptide 10 43 3.7E-10 T 22-04-2016 IPR012602 PyrBI operon leader peptide GO:0019856 APT61_RS04535 fabd1405044fad5bbeaced8cdb4d4703 366 PIRSF PIRSF028774 1 360 9.8E-192 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 APT61_RS04535 fabd1405044fad5bbeaced8cdb4d4703 366 PANTHER PTHR37524 1 360 8.3E-232 T 22-04-2016 APT61_RS04535 fabd1405044fad5bbeaced8cdb4d4703 366 Pfam PF01728 FtsJ-like methyltransferase 186 279 6.8E-8 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 APT61_RS04535 fabd1405044fad5bbeaced8cdb4d4703 366 Gene3D G3DSA:3.40.50.150 184 316 2.8E-14 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS04535 fabd1405044fad5bbeaced8cdb4d4703 366 SUPERFAMILY SSF53335 184 296 3.1E-12 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS04535 fabd1405044fad5bbeaced8cdb4d4703 366 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 86.108 T 22-04-2016 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 APT61_RS04535 fabd1405044fad5bbeaced8cdb4d4703 366 PANTHER PTHR37524:SF2 1 360 8.3E-232 T 22-04-2016 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 PANTHER PTHR30376 2 284 4.7E-129 T 22-04-2016 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 282 2.4E-34 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 SUPERFAMILY SSF88946 15 122 3.27E-39 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 Pfam PF04545 Sigma-70, region 4 229 281 1.3E-16 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 SUPERFAMILY SSF88659 202 284 1.14E-18 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 PRINTS PR00046 Major sigma-70 factor signature 253 268 4.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 PRINTS PR00046 Major sigma-70 factor signature 268 279 4.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 4.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 4.9E-19 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 Pfam PF04542 Sigma-70 region 2 53 122 6.2E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 285 55.098 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 Gene3D G3DSA:1.10.10.10 225 283 1.6E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 Gene3D G3DSA:1.10.601.10 14 122 1.5E-34 T 22-04-2016 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 284 1.2E-129 T 22-04-2016 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 Pfam PF00140 Sigma-70 factor, region 1.2 17 40 9.0E-5 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 APT61_RS01500 06a6baae25529c6e2d9e2dac2916608c 285 PIRSF PIRSF000770 7 285 1.4E-33 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 APT61_RS11480 a58f8701135b6eed759d932065c7848b 460 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 259 270 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APT61_RS11480 a58f8701135b6eed759d932065c7848b 460 Gene3D G3DSA:3.40.309.10 246 430 2.1E-59 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS11480 a58f8701135b6eed759d932065c7848b 460 Pfam PF00171 Aldehyde dehydrogenase family 9 455 9.3E-135 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS11480 a58f8701135b6eed759d932065c7848b 460 SUPERFAMILY SSF53720 6 457 5.63E-134 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS11480 a58f8701135b6eed759d932065c7848b 460 PANTHER PTHR11699 11 460 1.3E-244 T 22-04-2016 APT61_RS11480 a58f8701135b6eed759d932065c7848b 460 Gene3D G3DSA:3.40.605.10 5 245 1.9E-68 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS11480 a58f8701135b6eed759d932065c7848b 460 PANTHER PTHR11699:SF28 11 460 1.3E-244 T 22-04-2016 APT61_RS00805 1dde03b4dcc5f0a44b8715c369947da4 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 5.9E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS00805 1dde03b4dcc5f0a44b8715c369947da4 296 PANTHER PTHR30126 1 296 1.9E-199 T 22-04-2016 APT61_RS00805 1dde03b4dcc5f0a44b8715c369947da4 296 SUPERFAMILY SSF53850 89 294 3.08E-32 T 22-04-2016 APT61_RS00805 1dde03b4dcc5f0a44b8715c369947da4 296 PANTHER PTHR30126:SF14 1 296 1.9E-199 T 22-04-2016 APT61_RS00805 1dde03b4dcc5f0a44b8715c369947da4 296 SUPERFAMILY SSF46785 2 111 5.28E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00805 1dde03b4dcc5f0a44b8715c369947da4 296 Gene3D G3DSA:3.40.190.10 82 196 2.0E-23 T 22-04-2016 APT61_RS00805 1dde03b4dcc5f0a44b8715c369947da4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS00805 1dde03b4dcc5f0a44b8715c369947da4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS00805 1dde03b4dcc5f0a44b8715c369947da4 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.8E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS00805 1dde03b4dcc5f0a44b8715c369947da4 296 Gene3D G3DSA:1.10.10.10 2 81 7.8E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS00805 1dde03b4dcc5f0a44b8715c369947da4 296 Gene3D G3DSA:3.40.190.10 197 252 5.9E-9 T 22-04-2016 APT61_RS00805 1dde03b4dcc5f0a44b8715c369947da4 296 Pfam PF03466 LysR substrate binding domain 89 293 2.7E-37 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS06000 d084baca2a4179eb24829fccff075d3c 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.524 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06000 d084baca2a4179eb24829fccff075d3c 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.8E-53 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06000 d084baca2a4179eb24829fccff075d3c 143 SMART SM00562 3 140 1.6E-84 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06000 d084baca2a4179eb24829fccff075d3c 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 22-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06000 d084baca2a4179eb24829fccff075d3c 143 SUPERFAMILY SSF54919 1 141 1.44E-57 T 22-04-2016 APT61_RS06000 d084baca2a4179eb24829fccff075d3c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.3E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06000 d084baca2a4179eb24829fccff075d3c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.3E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06000 d084baca2a4179eb24829fccff075d3c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.3E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06000 d084baca2a4179eb24829fccff075d3c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.3E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06000 d084baca2a4179eb24829fccff075d3c 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.3E-39 T 22-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 APT61_RS06000 d084baca2a4179eb24829fccff075d3c 143 Gene3D G3DSA:3.30.70.141 1 140 1.2E-58 T 22-04-2016 APT61_RS06000 d084baca2a4179eb24829fccff075d3c 143 PANTHER PTHR11349 1 143 3.5E-77 T 22-04-2016 APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 PANTHER PTHR11851 411 927 0.0 T 22-04-2016 APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 PANTHER PTHR11851 1 394 0.0 T 22-04-2016 APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 75 98 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 SUPERFAMILY SSF63411 33 262 3.87E-50 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 SUPERFAMILY SSF63411 266 502 6.98E-65 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 PANTHER PTHR11851:SF135 411 927 0.0 T 22-04-2016 APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 PANTHER PTHR11851:SF135 1 394 0.0 T 22-04-2016 APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 Gene3D G3DSA:3.30.830.10 274 506 8.2E-64 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 SUPERFAMILY SSF63411 736 955 3.84E-45 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 Gene3D G3DSA:3.30.830.10 30 264 3.5E-59 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 SUPERFAMILY SSF63411 504 730 8.83E-46 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 Pfam PF00675 Insulinase (Peptidase family M16) 54 191 2.1E-37 T 22-04-2016 IPR011765 Peptidase M16, N-terminal APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 Pfam PF16187 Middle or third domain of peptidase_M16 400 675 5.0E-53 T 22-04-2016 IPR032632 Peptidase M16, middle/third domain APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 Pfam PF05193 Peptidase M16 inactive domain 681 856 2.4E-15 T 22-04-2016 IPR007863 Peptidase M16, C-terminal APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 Pfam PF05193 Peptidase M16 inactive domain 215 392 3.2E-17 T 22-04-2016 IPR007863 Peptidase M16, C-terminal APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 Gene3D G3DSA:3.30.830.10 507 732 8.6E-64 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APT61_RS04460 509ee2e4e9696e0ef70e9080adf27968 960 Gene3D G3DSA:3.30.830.10 733 956 5.8E-59 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APT61_RS10510 58cbc6a6abed403a36a96c023be2c385 150 SUPERFAMILY SSF74653 66 129 5.1E-10 T 22-04-2016 APT61_RS10510 58cbc6a6abed403a36a96c023be2c385 150 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 69 126 3.1E-7 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 APT61_RS01335 c683047a229780a66219cbd81e59bb59 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 8.3E-42 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal APT61_RS01335 c683047a229780a66219cbd81e59bb59 409 SUPERFAMILY SSF53901 3 252 2.46E-54 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS01335 c683047a229780a66219cbd81e59bb59 409 SMART SM00825 Beta-ketoacyl synthase 5 378 1.1E-11 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain APT61_RS01335 c683047a229780a66219cbd81e59bb59 409 PANTHER PTHR11712 3 408 1.3E-107 T 22-04-2016 APT61_RS01335 c683047a229780a66219cbd81e59bb59 409 Gene3D G3DSA:3.40.47.10 2 260 1.6E-55 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS01335 c683047a229780a66219cbd81e59bb59 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site APT61_RS01335 c683047a229780a66219cbd81e59bb59 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 364 1.1E-29 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal APT61_RS01335 c683047a229780a66219cbd81e59bb59 409 SUPERFAMILY SSF53901 216 408 4.57E-60 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS01335 c683047a229780a66219cbd81e59bb59 409 Gene3D G3DSA:3.40.47.10 264 408 3.1E-48 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 APT61_RS03905 a74a032265f203a2e5f0e72061595c18 236 PANTHER PTHR36111:SF1 2 236 5.4E-157 T 22-04-2016 APT61_RS03905 a74a032265f203a2e5f0e72061595c18 236 PANTHER PTHR36111 2 236 5.4E-157 T 22-04-2016 APT61_RS03905 a74a032265f203a2e5f0e72061595c18 236 Pfam PF04474 Protein of unknown function (DUF554) 3 228 1.2E-66 T 22-04-2016 IPR007563 Protein of unknown function DUF554 APT61_RS13105 1bd051d13ea926af9703fbf480fecece 252 SUPERFAMILY SSF88713 2 252 1.69E-71 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APT61_RS13105 1bd051d13ea926af9703fbf480fecece 252 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 249 38.436 T 22-04-2016 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 APT61_RS13105 1bd051d13ea926af9703fbf480fecece 252 Pfam PF04794 YdjC-like protein 5 240 5.8E-56 T 22-04-2016 IPR006879 Chitooligosaccharide deacetylase ChbG-like APT61_RS13105 1bd051d13ea926af9703fbf480fecece 252 PANTHER PTHR31609 1 252 3.4E-90 T 22-04-2016 APT61_RS13105 1bd051d13ea926af9703fbf480fecece 252 Gene3D G3DSA:3.20.20.370 4 252 2.9E-77 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APT61_RS15355 5142ccf54f18f4e7fafac1a41543da87 561 PANTHER PTHR30445 3 558 0.0 T 22-04-2016 APT61_RS15355 5142ccf54f18f4e7fafac1a41543da87 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 1.1E-37 T 22-04-2016 IPR006512 YidE/YbjL duplication APT61_RS15355 5142ccf54f18f4e7fafac1a41543da87 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 391 541 3.5E-45 T 22-04-2016 IPR006512 YidE/YbjL duplication APT61_RS15355 5142ccf54f18f4e7fafac1a41543da87 561 PANTHER PTHR30445:SF4 3 558 0.0 T 22-04-2016 APT61_RS15355 5142ccf54f18f4e7fafac1a41543da87 561 Gene3D G3DSA:3.30.70.1450 228 282 7.1E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS15355 5142ccf54f18f4e7fafac1a41543da87 561 Pfam PF06826 Predicted Permease Membrane Region 17 182 9.1E-40 T 22-04-2016 IPR006512 YidE/YbjL duplication APT61_RS15355 5142ccf54f18f4e7fafac1a41543da87 561 Pfam PF06826 Predicted Permease Membrane Region 385 554 8.6E-43 T 22-04-2016 IPR006512 YidE/YbjL duplication APT61_RS15355 5142ccf54f18f4e7fafac1a41543da87 561 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 57.544 T 22-04-2016 IPR023017 Transport protein YbjL, putative APT61_RS15355 5142ccf54f18f4e7fafac1a41543da87 561 SUPERFAMILY SSF116726 291 374 2.62E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS15355 5142ccf54f18f4e7fafac1a41543da87 561 Pfam PF02080 TrkA-C domain 227 281 5.9E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS15355 5142ccf54f18f4e7fafac1a41543da87 561 Pfam PF02080 TrkA-C domain 305 371 1.9E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS15355 5142ccf54f18f4e7fafac1a41543da87 561 Gene3D G3DSA:3.30.70.1450 303 374 2.5E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS15355 5142ccf54f18f4e7fafac1a41543da87 561 SUPERFAMILY SSF116726 227 282 2.88E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 APT61_RS21855 7c5c14143b3ade087ad3834f2e057226 267 SUPERFAMILY SSF53850 28 266 3.8E-78 T 22-04-2016 APT61_RS21855 7c5c14143b3ade087ad3834f2e057226 267 Pfam PF03180 NLPA lipoprotein 28 266 8.0E-92 T 22-04-2016 IPR004872 Lipoprotein NlpA family APT61_RS21855 7c5c14143b3ade087ad3834f2e057226 267 PIRSF PIRSF002854 1 267 4.9E-94 T 22-04-2016 IPR004872 Lipoprotein NlpA family APT61_RS21855 7c5c14143b3ade087ad3834f2e057226 267 Gene3D G3DSA:3.40.190.10 25 157 1.3E-53 T 22-04-2016 APT61_RS21855 7c5c14143b3ade087ad3834f2e057226 267 PANTHER PTHR30429 2 267 5.3E-141 T 22-04-2016 IPR004872 Lipoprotein NlpA family APT61_RS21855 7c5c14143b3ade087ad3834f2e057226 267 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 9 266 7.8E-144 T 22-04-2016 IPR004872 Lipoprotein NlpA family APT61_RS21855 7c5c14143b3ade087ad3834f2e057226 267 PANTHER PTHR30429:SF1 2 267 5.3E-141 T 22-04-2016 APT61_RS03510 240909d36e85068d2a56545a24815fd6 204 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 194 1.5E-82 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APT61_RS03510 240909d36e85068d2a56545a24815fd6 204 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.481 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APT61_RS03510 240909d36e85068d2a56545a24815fd6 204 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 7.1E-50 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APT61_RS03510 240909d36e85068d2a56545a24815fd6 204 SMART SM01207 10 185 1.1E-85 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APT61_RS03510 240909d36e85068d2a56545a24815fd6 204 PANTHER PTHR30309 1 204 3.8E-101 T 22-04-2016 APT61_RS03510 240909d36e85068d2a56545a24815fd6 204 PANTHER PTHR30309:SF0 1 204 3.8E-101 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 APT61_RS20085 69c46aedfd93d90d9bd2e4c0cb8e0ffd 1258 PANTHER PTHR36985 1 1258 0.0 T 22-04-2016 APT61_RS20085 69c46aedfd93d90d9bd2e4c0cb8e0ffd 1258 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 922 1258 1.1E-67 T 22-04-2016 IPR007452 Translocation and assembly module TamB APT61_RS02460 a24ccdaafb13a6d21a5a6792ec35308b 90 Pfam PF01337 Barstar (barnase inhibitor) 5 81 7.7E-5 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) APT61_RS02460 a24ccdaafb13a6d21a5a6792ec35308b 90 SUPERFAMILY SSF52038 1 88 1.23E-26 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) APT61_RS02460 a24ccdaafb13a6d21a5a6792ec35308b 90 Gene3D G3DSA:3.30.370.10 1 84 3.3E-13 T 22-04-2016 IPR000468 Barstar (barnase inhibitor) APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 Pfam PF00384 Molybdopterin oxidoreductase 61 488 1.1E-89 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 Gene3D G3DSA:2.40.40.20 528 686 1.7E-54 T 22-04-2016 APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 Pfam PF01568 Molydopterin dinucleotide binding domain 576 683 2.1E-29 T 22-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 PANTHER PTHR11615:SF112 1 706 2.5E-238 T 22-04-2016 APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 7 686 5.1E-273 T 22-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 SUPERFAMILY SSF50692 566 701 2.71E-43 T 22-04-2016 IPR009010 Aspartate decarboxylase-like domain APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 Gene3D G3DSA:2.20.25.90 1 54 2.7E-19 T 22-04-2016 APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 PANTHER PTHR11615 1 706 2.5E-238 T 22-04-2016 APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 9.7E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 SUPERFAMILY SSF53706 1 563 7.59E-193 T 22-04-2016 APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 Gene3D G3DSA:3.40.50.740 61 136 1.1E-82 T 22-04-2016 APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 Gene3D G3DSA:3.40.50.740 318 340 1.1E-82 T 22-04-2016 APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 Gene3D G3DSA:3.40.50.740 376 526 1.1E-82 T 22-04-2016 APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 SMART SM00926 1 54 5.7E-16 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 Gene3D G3DSA:3.40.228.10 138 317 2.2E-62 T 22-04-2016 APT61_RS05060 717f8a8caecf1e170a49a8aa315ed7c8 716 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 435 452 - T 22-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 APT61_RS17980 1d6aa361b7a9f8d9683d5979ca0f46e2 264 Pfam PF04205 FMN-binding domain 149 243 4.7E-16 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APT61_RS17980 1d6aa361b7a9f8d9683d5979ca0f46e2 264 SMART SM00900 149 247 2.5E-29 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 APT61_RS17980 1d6aa361b7a9f8d9683d5979ca0f46e2 264 PIRSF PIRSF009437 2 262 3.4E-102 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 APT61_RS17980 1d6aa361b7a9f8d9683d5979ca0f46e2 264 PANTHER PTHR37838 1 264 1.1E-106 T 22-04-2016 APT61_RS17980 1d6aa361b7a9f8d9683d5979ca0f46e2 264 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 8 259 36.341 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 APT61_RS17980 1d6aa361b7a9f8d9683d5979ca0f46e2 264 PANTHER PTHR37838:SF1 1 264 1.1E-106 T 22-04-2016 APT61_RS17980 1d6aa361b7a9f8d9683d5979ca0f46e2 264 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 7 255 1.6E-95 T 22-04-2016 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 APT61_RS16420 cb41e0e90d41e2e5cfa73ffb4c92816d 370 PANTHER PTHR30474:SF1 1 370 2.6E-182 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 APT61_RS16420 cb41e0e90d41e2e5cfa73ffb4c92816d 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 2.3E-137 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 APT61_RS16420 cb41e0e90d41e2e5cfa73ffb4c92816d 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 APT61_RS16420 cb41e0e90d41e2e5cfa73ffb4c92816d 370 Pfam PF01098 Cell cycle protein 20 364 2.2E-125 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APT61_RS16420 cb41e0e90d41e2e5cfa73ffb4c92816d 370 PANTHER PTHR30474 1 370 2.6E-182 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APT61_RS07565 259af6f3f16c1f928cf56c0efff10870 88 ProDom PD865043 PLASMID SPA-ORF10 3'REGION CYTOPLASMIC ORF-10 SPAS STY1854 44 88 0.005 T 22-04-2016 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 APT61_RS07565 259af6f3f16c1f928cf56c0efff10870 88 Pfam PF10798 Biofilm development protein YmgB/AriR 30 87 4.3E-23 T 22-04-2016 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 APT61_RS19190 6d1d7aa4ef1b5b81246d11f3cad82ef4 225 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 221 8.0E-74 T 22-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 APT61_RS19190 6d1d7aa4ef1b5b81246d11f3cad82ef4 225 Gene3D G3DSA:3.40.50.1000 92 223 2.0E-42 T 22-04-2016 IPR023214 HAD-like domain APT61_RS19190 6d1d7aa4ef1b5b81246d11f3cad82ef4 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 90 194 6.2E-21 T 22-04-2016 IPR023214 HAD-like domain APT61_RS19190 6d1d7aa4ef1b5b81246d11f3cad82ef4 225 Gene3D G3DSA:1.10.150.240 15 91 6.6E-18 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APT61_RS19190 6d1d7aa4ef1b5b81246d11f3cad82ef4 225 PANTHER PTHR12725 1 222 6.7E-52 T 22-04-2016 APT61_RS19190 6d1d7aa4ef1b5b81246d11f3cad82ef4 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 61 195 2.0E-9 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS19190 6d1d7aa4ef1b5b81246d11f3cad82ef4 225 PANTHER PTHR12725:SF57 1 222 6.7E-52 T 22-04-2016 APT61_RS19190 6d1d7aa4ef1b5b81246d11f3cad82ef4 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 8.32E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS19190 6d1d7aa4ef1b5b81246d11f3cad82ef4 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 12 23 8.32E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS19190 6d1d7aa4ef1b5b81246d11f3cad82ef4 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 8.32E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS19190 6d1d7aa4ef1b5b81246d11f3cad82ef4 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 8.32E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS19190 6d1d7aa4ef1b5b81246d11f3cad82ef4 225 SUPERFAMILY SSF56784 3 222 5.37E-46 T 22-04-2016 IPR023214 HAD-like domain APT61_RS19190 6d1d7aa4ef1b5b81246d11f3cad82ef4 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 189 3.7E-16 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS17680 17dc5ca09948cd58a282d33eef6b3524 433 PANTHER PTHR11662 6 422 3.7E-173 T 22-04-2016 APT61_RS17680 17dc5ca09948cd58a282d33eef6b3524 433 Pfam PF07690 Major Facilitator Superfamily 25 385 1.9E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS17680 17dc5ca09948cd58a282d33eef6b3524 433 PANTHER PTHR11662:SF286 6 422 3.7E-173 T 22-04-2016 APT61_RS17680 17dc5ca09948cd58a282d33eef6b3524 433 SUPERFAMILY SSF103473 10 419 1.83E-71 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS17680 17dc5ca09948cd58a282d33eef6b3524 433 Gene3D G3DSA:1.20.1250.20 232 420 3.5E-35 T 22-04-2016 APT61_RS17680 17dc5ca09948cd58a282d33eef6b3524 433 Gene3D G3DSA:1.20.1250.20 11 211 2.2E-49 T 22-04-2016 APT61_RS17680 17dc5ca09948cd58a282d33eef6b3524 433 PIRSF PIRSF002808 2 432 4.5E-120 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 APT61_RS15665 3aaf83c3e19653d7efd728beca1b5c33 219 PANTHER PTHR30614:SF13 1 219 1.2E-175 T 22-04-2016 APT61_RS15665 3aaf83c3e19653d7efd728beca1b5c33 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 111 1.5E-31 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APT61_RS15665 3aaf83c3e19653d7efd728beca1b5c33 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 4.8E-24 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15665 3aaf83c3e19653d7efd728beca1b5c33 219 PANTHER PTHR30614 1 219 1.2E-175 T 22-04-2016 APT61_RS15665 3aaf83c3e19653d7efd728beca1b5c33 219 SUPERFAMILY SSF161098 13 202 7.33E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15665 3aaf83c3e19653d7efd728beca1b5c33 219 Gene3D G3DSA:1.10.3720.10 13 217 3.6E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS17255 e4f69ba357442b2d3fff3cf40ab6cde1 592 PANTHER PTHR24221:SF256 1 584 0.0 T 22-04-2016 APT61_RS17255 e4f69ba357442b2d3fff3cf40ab6cde1 592 SUPERFAMILY SSF90123 12 331 4.05E-70 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS17255 e4f69ba357442b2d3fff3cf40ab6cde1 592 SMART SM00382 366 557 3.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS17255 e4f69ba357442b2d3fff3cf40ab6cde1 592 Pfam PF00005 ABC transporter 357 505 1.2E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS17255 e4f69ba357442b2d3fff3cf40ab6cde1 592 PANTHER PTHR24221 1 584 0.0 T 22-04-2016 APT61_RS17255 e4f69ba357442b2d3fff3cf40ab6cde1 592 SUPERFAMILY SSF52540 337 576 1.52E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17255 e4f69ba357442b2d3fff3cf40ab6cde1 592 Pfam PF00664 ABC transporter transmembrane region 27 295 5.5E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS17255 e4f69ba357442b2d3fff3cf40ab6cde1 592 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS17255 e4f69ba357442b2d3fff3cf40ab6cde1 592 Gene3D G3DSA:1.20.1560.10 12 325 1.6E-75 T 22-04-2016 APT61_RS17255 e4f69ba357442b2d3fff3cf40ab6cde1 592 Gene3D G3DSA:3.40.50.300 341 581 6.4E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07765 9e7426f959e85ca4666a632c933aef14 299 PANTHER PTHR10491:SF4 1 295 4.5E-98 T 22-04-2016 APT61_RS07765 9e7426f959e85ca4666a632c933aef14 299 PANTHER PTHR10491 1 295 4.5E-98 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family APT61_RS07765 9e7426f959e85ca4666a632c933aef14 299 Gene3D G3DSA:3.40.50.720 1 234 6.3E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07765 9e7426f959e85ca4666a632c933aef14 299 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 292 1.4E-96 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family APT61_RS07765 9e7426f959e85ca4666a632c933aef14 299 SUPERFAMILY SSF51735 1 294 8.42E-102 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS07765 9e7426f959e85ca4666a632c933aef14 299 Pfam PF04321 RmlD substrate binding domain 1 293 2.1E-107 T 22-04-2016 IPR029903 RmlD-like substrate binding domain APT61_RS01880 2887118e702e05ca39af80477c498a07 187 PRINTS PR00097 Anthranilate synthase component II signature 47 56 5.1E-37 T 22-04-2016 APT61_RS01880 2887118e702e05ca39af80477c498a07 187 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.1E-37 T 22-04-2016 APT61_RS01880 2887118e702e05ca39af80477c498a07 187 PRINTS PR00097 Anthranilate synthase component II signature 119 131 5.1E-37 T 22-04-2016 APT61_RS01880 2887118e702e05ca39af80477c498a07 187 PRINTS PR00097 Anthranilate synthase component II signature 164 177 5.1E-37 T 22-04-2016 APT61_RS01880 2887118e702e05ca39af80477c498a07 187 PRINTS PR00097 Anthranilate synthase component II signature 74 85 5.1E-37 T 22-04-2016 APT61_RS01880 2887118e702e05ca39af80477c498a07 187 PRINTS PR00097 Anthranilate synthase component II signature 99 107 5.1E-37 T 22-04-2016 APT61_RS01880 2887118e702e05ca39af80477c498a07 187 PANTHER PTHR11922:SF7 1 185 1.0E-96 T 22-04-2016 APT61_RS01880 2887118e702e05ca39af80477c498a07 187 SUPERFAMILY SSF52317 1 186 4.08E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS01880 2887118e702e05ca39af80477c498a07 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 5.4E-14 T 22-04-2016 APT61_RS01880 2887118e702e05ca39af80477c498a07 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 5.4E-14 T 22-04-2016 APT61_RS01880 2887118e702e05ca39af80477c498a07 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 5.4E-14 T 22-04-2016 APT61_RS01880 2887118e702e05ca39af80477c498a07 187 Pfam PF00117 Glutamine amidotransferase class-I 3 186 4.3E-55 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APT61_RS01880 2887118e702e05ca39af80477c498a07 187 Gene3D G3DSA:3.40.50.880 1 186 1.7E-67 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS01880 2887118e702e05ca39af80477c498a07 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 2.1E-5 T 22-04-2016 APT61_RS01880 2887118e702e05ca39af80477c498a07 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.1E-5 T 22-04-2016 APT61_RS01880 2887118e702e05ca39af80477c498a07 187 PANTHER PTHR11922 1 185 1.0E-96 T 22-04-2016 APT61_RS01880 2887118e702e05ca39af80477c498a07 187 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 8.6E-92 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 APT61_RS10540 a22cd511be990a9f4cb6e47d2ff5d732 389 SUPERFAMILY SSF53383 10 386 1.46E-97 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS10540 a22cd511be990a9f4cb6e47d2ff5d732 389 Gene3D G3DSA:3.90.1150.10 276 383 3.8E-17 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS10540 a22cd511be990a9f4cb6e47d2ff5d732 389 PANTHER PTHR11751 12 389 7.7E-125 T 22-04-2016 APT61_RS10540 a22cd511be990a9f4cb6e47d2ff5d732 389 Pfam PF00155 Aminotransferase class I and II 32 383 1.0E-56 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS10540 a22cd511be990a9f4cb6e47d2ff5d732 389 Gene3D G3DSA:3.40.640.10 47 275 6.5E-74 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS10540 a22cd511be990a9f4cb6e47d2ff5d732 389 PANTHER PTHR11751:SF301 12 389 7.7E-125 T 22-04-2016 APT61_RS01970 e26e94dd8bf712904ba4e292be26b8d3 184 Pfam PF02525 Flavodoxin-like fold 7 172 1.8E-39 T 22-04-2016 IPR003680 Flavodoxin-like fold APT61_RS01970 e26e94dd8bf712904ba4e292be26b8d3 184 SUPERFAMILY SSF52218 7 175 8.38E-47 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS01970 e26e94dd8bf712904ba4e292be26b8d3 184 Gene3D G3DSA:3.40.50.360 6 176 1.0E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS01970 e26e94dd8bf712904ba4e292be26b8d3 184 PANTHER PTHR10204:SF42 6 177 2.5E-82 T 22-04-2016 APT61_RS01970 e26e94dd8bf712904ba4e292be26b8d3 184 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 2 184 48.802 T 22-04-2016 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 APT61_RS01970 e26e94dd8bf712904ba4e292be26b8d3 184 PANTHER PTHR10204 6 177 2.5E-82 T 22-04-2016 APT61_RS13950 621cbe7de8b89609e9a1cd4bdb01deb9 264 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APT61_RS13950 621cbe7de8b89609e9a1cd4bdb01deb9 264 Gene3D G3DSA:3.20.20.140 2 257 1.3E-86 T 22-04-2016 APT61_RS13950 621cbe7de8b89609e9a1cd4bdb01deb9 264 PANTHER PTHR10060 1 258 1.6E-137 T 22-04-2016 IPR001130 TatD family GO:0016788 APT61_RS13950 621cbe7de8b89609e9a1cd4bdb01deb9 264 SUPERFAMILY SSF51556 1 259 1.27E-87 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS13950 621cbe7de8b89609e9a1cd4bdb01deb9 264 PANTHER PTHR10060:SF20 1 258 1.6E-137 T 22-04-2016 APT61_RS13950 621cbe7de8b89609e9a1cd4bdb01deb9 264 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 5.7E-95 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 APT61_RS13950 621cbe7de8b89609e9a1cd4bdb01deb9 264 Pfam PF01026 TatD related DNase 4 255 1.3E-75 T 22-04-2016 IPR001130 TatD family GO:0016788 APT61_RS13950 621cbe7de8b89609e9a1cd4bdb01deb9 264 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 APT61_RS13950 621cbe7de8b89609e9a1cd4bdb01deb9 264 PIRSF PIRSF005902 1 259 4.3E-75 T 22-04-2016 IPR001130 TatD family GO:0016788 APT61_RS10675 1f5b36af1d339b03dc7afe917fdd1fd3 337 Pfam PF00005 ABC transporter 21 162 1.4E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS10675 1f5b36af1d339b03dc7afe917fdd1fd3 337 PANTHER PTHR24220:SF150 6 248 6.4E-132 T 22-04-2016 APT61_RS10675 1f5b36af1d339b03dc7afe917fdd1fd3 337 PANTHER PTHR24220 6 248 6.4E-132 T 22-04-2016 APT61_RS10675 1f5b36af1d339b03dc7afe917fdd1fd3 337 Gene3D G3DSA:3.40.50.300 4 235 2.0E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10675 1f5b36af1d339b03dc7afe917fdd1fd3 337 SMART SM00382 29 212 1.4E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS10675 1f5b36af1d339b03dc7afe917fdd1fd3 337 SUPERFAMILY SSF52540 5 241 3.93E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10675 1f5b36af1d339b03dc7afe917fdd1fd3 337 SUPERFAMILY SSF50331 244 336 2.21E-10 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APT61_RS10675 1f5b36af1d339b03dc7afe917fdd1fd3 337 Pfam PF08402 TOBE domain 257 331 3.8E-16 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APT61_RS10675 1f5b36af1d339b03dc7afe917fdd1fd3 337 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS03090 a04374fed08b318d8c3dcc2079cd06c1 162 PANTHER PTHR30399 1 162 7.6E-108 T 22-04-2016 APT61_RS03090 a04374fed08b318d8c3dcc2079cd06c1 162 Pfam PF01863 Protein of unknown function DUF45 93 149 4.9E-10 T 22-04-2016 IPR002725 Protein of unknown function DUF45 APT61_RS03090 a04374fed08b318d8c3dcc2079cd06c1 162 PANTHER PTHR30399:SF4 1 162 7.6E-108 T 22-04-2016 APT61_RS21905 f19c8f92f4924b7cfbb2f33436d7433b 459 Gene3D G3DSA:2.40.170.10 81 459 1.5E-91 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS21905 f19c8f92f4924b7cfbb2f33436d7433b 459 SUPERFAMILY SSF56935 80 459 4.4E-91 T 22-04-2016 APT61_RS21905 f19c8f92f4924b7cfbb2f33436d7433b 459 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 357 452 0.008 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS21905 f19c8f92f4924b7cfbb2f33436d7433b 459 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 108 207 3.0E-49 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS21905 f19c8f92f4924b7cfbb2f33436d7433b 459 PANTHER PTHR38762 56 459 5.6E-12 T 22-04-2016 APT61_RS21905 f19c8f92f4924b7cfbb2f33436d7433b 459 Pfam PF02264 LamB porin 82 459 4.6E-78 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS11370 f1c258c3b4b20c3327ad78c4ef60b0c2 286 Gene3D G3DSA:3.10.310.10 119 262 3.6E-44 T 22-04-2016 APT61_RS11370 f1c258c3b4b20c3327ad78c4ef60b0c2 286 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 4 274 30.775 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS11370 f1c258c3b4b20c3327ad78c4ef60b0c2 286 PANTHER PTHR31689 6 278 6.1E-89 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS11370 f1c258c3b4b20c3327ad78c4ef60b0c2 286 SUPERFAMILY SSF54506 5 129 3.92E-30 T 22-04-2016 APT61_RS11370 f1c258c3b4b20c3327ad78c4ef60b0c2 286 Pfam PF01678 Diaminopimelate epimerase 153 266 1.7E-25 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS11370 f1c258c3b4b20c3327ad78c4ef60b0c2 286 Pfam PF01678 Diaminopimelate epimerase 6 123 2.6E-23 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS11370 f1c258c3b4b20c3327ad78c4ef60b0c2 286 Gene3D G3DSA:3.10.310.10 4 118 7.9E-37 T 22-04-2016 APT61_RS11370 f1c258c3b4b20c3327ad78c4ef60b0c2 286 SUPERFAMILY SSF54506 138 269 8.11E-41 T 22-04-2016 APT61_RS11370 f1c258c3b4b20c3327ad78c4ef60b0c2 286 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 6 269 2.9E-67 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS14065 6daaead16cb4011f4719dba2cf9b0d3c 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 3.6E-26 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APT61_RS14065 6daaead16cb4011f4719dba2cf9b0d3c 260 PANTHER PTHR30435:SF19 1 260 1.2E-139 T 22-04-2016 APT61_RS14065 6daaead16cb4011f4719dba2cf9b0d3c 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 3.1E-117 T 22-04-2016 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 APT61_RS14065 6daaead16cb4011f4719dba2cf9b0d3c 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 8.2E-29 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G APT61_RS14065 6daaead16cb4011f4719dba2cf9b0d3c 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 1.9E-49 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G APT61_RS14065 6daaead16cb4011f4719dba2cf9b0d3c 260 PANTHER PTHR30435 1 260 1.2E-139 T 22-04-2016 APT61_RS14065 6daaead16cb4011f4719dba2cf9b0d3c 260 SUPERFAMILY SSF117143 93 222 7.59E-35 T 22-04-2016 APT61_RS14065 6daaead16cb4011f4719dba2cf9b0d3c 260 Pfam PF00460 Flagella basal body rod protein 5 35 8.6E-14 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APT61_RS14065 6daaead16cb4011f4719dba2cf9b0d3c 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site APT61_RS22160 19953a89aca8ae27256cb43c4413d50e 257 SMART SM00382 35 237 8.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS22160 19953a89aca8ae27256cb43c4413d50e 257 PANTHER PTHR24220 12 252 1.1E-197 T 22-04-2016 APT61_RS22160 19953a89aca8ae27256cb43c4413d50e 257 Gene3D G3DSA:3.40.50.300 10 251 1.0E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS22160 19953a89aca8ae27256cb43c4413d50e 257 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 11 257 9.6E-121 T 22-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 APT61_RS22160 19953a89aca8ae27256cb43c4413d50e 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS22160 19953a89aca8ae27256cb43c4413d50e 257 SUPERFAMILY SSF52540 10 243 2.9E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS22160 19953a89aca8ae27256cb43c4413d50e 257 PANTHER PTHR24220:SF560 12 252 1.1E-197 T 22-04-2016 APT61_RS22160 19953a89aca8ae27256cb43c4413d50e 257 Pfam PF00005 ABC transporter 26 181 5.9E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS10800 1508c03927c643bcc5c0ecee28f7087c 132 SUPERFAMILY SSF51182 6 131 2.22E-30 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS10800 1508c03927c643bcc5c0ecee28f7087c 132 PANTHER PTHR33570:SF5 1 131 1.0E-53 T 22-04-2016 APT61_RS10800 1508c03927c643bcc5c0ecee28f7087c 132 PANTHER PTHR33570 1 131 1.0E-53 T 22-04-2016 APT61_RS10800 1508c03927c643bcc5c0ecee28f7087c 132 Gene3D G3DSA:2.60.120.10 13 129 1.3E-33 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS10800 1508c03927c643bcc5c0ecee28f7087c 132 Pfam PF07883 Cupin domain 41 104 2.8E-10 T 22-04-2016 IPR013096 Cupin 2, conserved barrel APT61_RS19685 3436db5c28d3909c489cc49e17a22bc0 69 Pfam PF07235 Protein of unknown function (DUF1427) 5 46 2.5E-20 T 22-04-2016 IPR009872 Protein of unknown function DUF1427 APT61_RS19685 3436db5c28d3909c489cc49e17a22bc0 69 TIGRFAM TIGR03510 XapX: XapX domain 5 47 1.6E-19 T 22-04-2016 IPR020017 XapX domain APT61_RS06145 f33759eed7e88dcf0c256f8cc1864012 476 Pfam PF00232 Glycosyl hydrolase family 1 4 473 2.7E-134 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS06145 f33759eed7e88dcf0c256f8cc1864012 476 SUPERFAMILY SSF51445 2 469 2.12E-166 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS06145 f33759eed7e88dcf0c256f8cc1864012 476 PANTHER PTHR10353 4 476 1.1E-238 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS06145 f33759eed7e88dcf0c256f8cc1864012 476 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site APT61_RS06145 f33759eed7e88dcf0c256f8cc1864012 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 1.3E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS06145 f33759eed7e88dcf0c256f8cc1864012 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 1.3E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS06145 f33759eed7e88dcf0c256f8cc1864012 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 438 450 1.3E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS06145 f33759eed7e88dcf0c256f8cc1864012 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 1.3E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS06145 f33759eed7e88dcf0c256f8cc1864012 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 430 1.3E-16 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 APT61_RS06145 f33759eed7e88dcf0c256f8cc1864012 476 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site APT61_RS06145 f33759eed7e88dcf0c256f8cc1864012 476 Gene3D G3DSA:3.20.20.80 3 475 4.1E-154 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS06145 f33759eed7e88dcf0c256f8cc1864012 476 PANTHER PTHR10353:SF35 4 476 1.1E-238 T 22-04-2016 APT61_RS10825 d9e3de6d768cbcc90b2d7220d54ba8a8 331 SUPERFAMILY SSF51679 4 322 1.57E-63 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS10825 d9e3de6d768cbcc90b2d7220d54ba8a8 331 Pfam PF00296 Luciferase-like monooxygenase 18 299 3.6E-28 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS10825 d9e3de6d768cbcc90b2d7220d54ba8a8 331 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 5 323 3.3E-104 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 APT61_RS10825 d9e3de6d768cbcc90b2d7220d54ba8a8 331 Gene3D G3DSA:3.20.20.30 4 322 7.5E-72 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS10825 d9e3de6d768cbcc90b2d7220d54ba8a8 331 PANTHER PTHR30137 1 323 1.9E-74 T 22-04-2016 APT61_RS10825 d9e3de6d768cbcc90b2d7220d54ba8a8 331 PANTHER PTHR30137:SF6 1 323 1.9E-74 T 22-04-2016 APT61_RS08105 7958044946999526c42db4dcd15c787c 560 PANTHER PTHR30046:SF0 1 327 1.7E-212 T 22-04-2016 APT61_RS08105 7958044946999526c42db4dcd15c787c 560 PANTHER PTHR30046:SF0 348 560 1.7E-212 T 22-04-2016 APT61_RS08105 7958044946999526c42db4dcd15c787c 560 PANTHER PTHR30046 1 327 1.7E-212 T 22-04-2016 APT61_RS08105 7958044946999526c42db4dcd15c787c 560 PANTHER PTHR30046 348 560 1.7E-212 T 22-04-2016 APT61_RS08105 7958044946999526c42db4dcd15c787c 560 Pfam PF01514 Secretory protein of YscJ/FliF family 32 221 8.1E-76 T 22-04-2016 IPR006182 Secretory protein YscJ/FliF APT61_RS08105 7958044946999526c42db4dcd15c787c 560 PRINTS PR01009 Flagellar M-ring protein signature 365 389 8.0E-45 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 APT61_RS08105 7958044946999526c42db4dcd15c787c 560 PRINTS PR01009 Flagellar M-ring protein signature 266 284 8.0E-45 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 APT61_RS08105 7958044946999526c42db4dcd15c787c 560 PRINTS PR01009 Flagellar M-ring protein signature 122 140 8.0E-45 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 APT61_RS08105 7958044946999526c42db4dcd15c787c 560 PRINTS PR01009 Flagellar M-ring protein signature 154 168 8.0E-45 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 APT61_RS08105 7958044946999526c42db4dcd15c787c 560 PRINTS PR01009 Flagellar M-ring protein signature 197 215 8.0E-45 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 APT61_RS08105 7958044946999526c42db4dcd15c787c 560 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 10 557 4.3E-206 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 APT61_RS08105 7958044946999526c42db4dcd15c787c 560 Pfam PF08345 Flagellar M-ring protein C-terminal 253 437 8.6E-51 T 22-04-2016 IPR013556 Flagellar M-ring C-terminal APT61_RS08105 7958044946999526c42db4dcd15c787c 560 PIRSF PIRSF004862 3 560 1.6E-174 T 22-04-2016 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 APT61_RS09255 3a0334285aa5262e1bf1022c8d52427d 292 Gene3D G3DSA:1.10.3720.10 93 287 6.9E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09255 3a0334285aa5262e1bf1022c8d52427d 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 275 2.9E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09255 3a0334285aa5262e1bf1022c8d52427d 292 PANTHER PTHR30151:SF7 25 292 4.3E-88 T 22-04-2016 APT61_RS09255 3a0334285aa5262e1bf1022c8d52427d 292 TIGRFAM TIGR01183 ntrB: nitrate ABC transporter, permease protein 84 278 2.8E-71 T 22-04-2016 IPR005889 Nitrate transport permease GO:0015112|GO:0015706|GO:0016021 APT61_RS09255 3a0334285aa5262e1bf1022c8d52427d 292 SUPERFAMILY SSF161098 99 277 4.58E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09255 3a0334285aa5262e1bf1022c8d52427d 292 PANTHER PTHR30151 25 292 4.3E-88 T 22-04-2016 APT61_RS00425 0fa533f6c3657a1b1d65fb07d1af15bb 276 SUPERFAMILY SSF53639 1 271 1.86E-72 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS00425 0fa533f6c3657a1b1d65fb07d1af15bb 276 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 238 8.9E-34 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS00425 0fa533f6c3657a1b1d65fb07d1af15bb 276 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 1 272 57.779 T 22-04-2016 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19|UniPathway: UPA00541 APT61_RS00425 0fa533f6c3657a1b1d65fb07d1af15bb 276 PANTHER PTHR22789:SF4 68 272 1.6E-134 T 22-04-2016 APT61_RS00425 0fa533f6c3657a1b1d65fb07d1af15bb 276 PANTHER PTHR22789:SF4 1 39 1.6E-134 T 22-04-2016 APT61_RS00425 0fa533f6c3657a1b1d65fb07d1af15bb 276 Gene3D G3DSA:3.40.225.10 2 272 3.7E-105 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS00425 0fa533f6c3657a1b1d65fb07d1af15bb 276 SMART SM01007 11 239 9.1E-29 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal APT61_RS00425 0fa533f6c3657a1b1d65fb07d1af15bb 276 PANTHER PTHR22789 68 272 1.6E-134 T 22-04-2016 APT61_RS00425 0fa533f6c3657a1b1d65fb07d1af15bb 276 PANTHER PTHR22789 1 39 1.6E-134 T 22-04-2016 APT61_RS00425 0fa533f6c3657a1b1d65fb07d1af15bb 276 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 1 272 2.9E-137 T 22-04-2016 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19|UniPathway: UPA00541 APT61_RS11860 59a23cb57d4d39a6e57254242c45d21d 178 Gene3D G3DSA:3.40.630.30 2 174 9.5E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS11860 59a23cb57d4d39a6e57254242c45d21d 178 PANTHER PTHR13256 1 154 1.7E-32 T 22-04-2016 APT61_RS11860 59a23cb57d4d39a6e57254242c45d21d 178 Pfam PF13302 Acetyltransferase (GNAT) domain 7 148 5.4E-27 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS11860 59a23cb57d4d39a6e57254242c45d21d 178 SUPERFAMILY SSF55729 2 153 2.98E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS04575 5ce9f13d63e0238b5fe58aba2f7eade8 108 Gene3D G3DSA:1.20.1440.40 1 104 1.3E-41 T 22-04-2016 IPR023376 YqcC-like domain APT61_RS04575 5ce9f13d63e0238b5fe58aba2f7eade8 108 PIRSF PIRSF006257 1 108 2.7E-40 T 22-04-2016 IPR007384 Protein of unknown function UCP006257 APT61_RS04575 5ce9f13d63e0238b5fe58aba2f7eade8 108 Pfam PF04287 tRNA pseudouridine synthase C 7 103 9.1E-36 T 22-04-2016 IPR023376 YqcC-like domain APT61_RS04575 5ce9f13d63e0238b5fe58aba2f7eade8 108 PANTHER PTHR39586 2 108 1.4E-41 T 22-04-2016 APT61_RS04575 5ce9f13d63e0238b5fe58aba2f7eade8 108 SUPERFAMILY SSF158452 1 106 3.01E-39 T 22-04-2016 IPR023376 YqcC-like domain APT61_RS05385 0c61b4b065b991162d6a15d2c01d418f 144 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 140 9.9E-32 T 22-04-2016 IPR006750 Putative inner membrane exporter, YdcZ APT61_RS05385 0c61b4b065b991162d6a15d2c01d418f 144 PANTHER PTHR34821:SF2 1 143 1.1E-16 T 22-04-2016 APT61_RS05385 0c61b4b065b991162d6a15d2c01d418f 144 PANTHER PTHR34821 1 143 1.1E-16 T 22-04-2016 APT61_RS20670 fe591085f34dc3b627023b7bd0adac7e 194 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 190 1.2E-57 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 APT61_RS20670 fe591085f34dc3b627023b7bd0adac7e 194 PIRSF PIRSF020680 1 194 1.1E-63 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 APT61_RS20670 fe591085f34dc3b627023b7bd0adac7e 194 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 192 3.2E-61 T 22-04-2016 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 APT61_RS20670 fe591085f34dc3b627023b7bd0adac7e 194 SUPERFAMILY SSF159709 13 193 2.35E-57 T 22-04-2016 APT61_RS08180 e91f330797beb9f80da47675242a2b29 328 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 12 328 1.9E-139 T 22-04-2016 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 APT61_RS08180 e91f330797beb9f80da47675242a2b29 328 PIRSF PIRSF006278 1 328 6.7E-95 T 22-04-2016 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase APT61_RS08180 e91f330797beb9f80da47675242a2b29 328 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 1 328 75.293 T 22-04-2016 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 APT61_RS08180 e91f330797beb9f80da47675242a2b29 328 Gene3D G3DSA:3.40.50.1100 112 325 2.1E-68 T 22-04-2016 APT61_RS08180 e91f330797beb9f80da47675242a2b29 328 PANTHER PTHR10314 4 317 3.2E-165 T 22-04-2016 APT61_RS08180 e91f330797beb9f80da47675242a2b29 328 SUPERFAMILY SSF53686 7 326 8.25E-87 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS08180 e91f330797beb9f80da47675242a2b29 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 316 5.2E-54 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS08180 e91f330797beb9f80da47675242a2b29 328 PANTHER PTHR10314:SF105 4 317 3.2E-165 T 22-04-2016 APT61_RS08310 2ca8255d8e9faa9a783918888910b34e 403 Pfam PF03222 Tryptophan/tyrosine permease family 3 391 1.8E-135 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APT61_RS08310 2ca8255d8e9faa9a783918888910b34e 403 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 22-04-2016 IPR013061 Tryptophan/tryrosine permease, conserved site APT61_RS08310 2ca8255d8e9faa9a783918888910b34e 403 PANTHER PTHR32195 1 399 3.2E-212 T 22-04-2016 APT61_RS08310 2ca8255d8e9faa9a783918888910b34e 403 PANTHER PTHR32195:SF17 1 399 3.2E-212 T 22-04-2016 APT61_RS08310 2ca8255d8e9faa9a783918888910b34e 403 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 8.5E-139 T 22-04-2016 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 APT61_RS08310 2ca8255d8e9faa9a783918888910b34e 403 PRINTS PR00166 Aromatic amino acid permease signature 337 356 1.3E-88 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS08310 2ca8255d8e9faa9a783918888910b34e 403 PRINTS PR00166 Aromatic amino acid permease signature 37 56 1.3E-88 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS08310 2ca8255d8e9faa9a783918888910b34e 403 PRINTS PR00166 Aromatic amino acid permease signature 221 240 1.3E-88 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS08310 2ca8255d8e9faa9a783918888910b34e 403 PRINTS PR00166 Aromatic amino acid permease signature 182 204 1.3E-88 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS08310 2ca8255d8e9faa9a783918888910b34e 403 PRINTS PR00166 Aromatic amino acid permease signature 282 301 1.3E-88 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS08310 2ca8255d8e9faa9a783918888910b34e 403 PRINTS PR00166 Aromatic amino acid permease signature 316 334 1.3E-88 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS08310 2ca8255d8e9faa9a783918888910b34e 403 PRINTS PR00166 Aromatic amino acid permease signature 148 168 1.3E-88 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS08310 2ca8255d8e9faa9a783918888910b34e 403 PRINTS PR00166 Aromatic amino acid permease signature 10 33 1.3E-88 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS08310 2ca8255d8e9faa9a783918888910b34e 403 PRINTS PR00166 Aromatic amino acid permease signature 82 102 1.3E-88 T 22-04-2016 IPR002091 Aromatic amino acid permease GO:0006865|GO:0016020 APT61_RS16055 ddbae2c1000307c7ca61fac0149ffb68 94 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 2 93 6.4E-40 T 22-04-2016 IPR011846 Cyd operon protein YbgE APT61_RS16055 ddbae2c1000307c7ca61fac0149ffb68 94 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 14 91 8.9E-33 T 22-04-2016 IPR011846 Cyd operon protein YbgE APT61_RS09470 c85f7b0c5363b2f48a1d12fae77e2236 90 Pfam PF05957 Bacterial protein of unknown function (DUF883) 11 90 7.6E-12 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB APT61_RS09470 c85f7b0c5363b2f48a1d12fae77e2236 90 SUPERFAMILY SSF69047 15 67 3.79E-5 T 22-04-2016 IPR008462 CsbD-like APT61_RS09470 c85f7b0c5363b2f48a1d12fae77e2236 90 Gene3D G3DSA:1.10.1470.10 15 67 1.4E-7 T 22-04-2016 IPR008462 CsbD-like APT61_RS02300 90adbb12c534003115cfcaf11fb40b92 367 PANTHER PTHR30085:SF3 64 367 9.8E-188 T 22-04-2016 APT61_RS02300 90adbb12c534003115cfcaf11fb40b92 367 PANTHER PTHR30085 64 367 9.8E-188 T 22-04-2016 APT61_RS02300 90adbb12c534003115cfcaf11fb40b92 367 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 156 252 3.3E-19 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APT61_RS02300 90adbb12c534003115cfcaf11fb40b92 367 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 174 360 5.0E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS02300 90adbb12c534003115cfcaf11fb40b92 367 Gene3D G3DSA:1.10.3720.10 153 361 8.1E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS02300 90adbb12c534003115cfcaf11fb40b92 367 SUPERFAMILY SSF161098 154 346 4.45E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS17985 5f1cd4d186b7f8610ac71008c4e45012 412 PANTHER PTHR30578:SF1 3 412 8.0E-258 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APT61_RS17985 5f1cd4d186b7f8610ac71008c4e45012 412 PIRSF PIRSF016055 1 412 7.8E-199 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APT61_RS17985 5f1cd4d186b7f8610ac71008c4e45012 412 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 2 412 36.994 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APT61_RS17985 5f1cd4d186b7f8610ac71008c4e45012 412 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 3 408 1.5E-193 T 22-04-2016 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0022904|GO:0055114 APT61_RS17985 5f1cd4d186b7f8610ac71008c4e45012 412 PANTHER PTHR30578 3 412 8.0E-258 T 22-04-2016 APT61_RS17985 5f1cd4d186b7f8610ac71008c4e45012 412 Pfam PF03116 NQR2, RnfD, RnfE family 41 405 1.1E-107 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 APT61_RS17935 f99aaa5a767df4afd4d8b8dfcec4a966 414 Hamap MF_01063 Esterase FrsA [frsA]. 1 414 62.035 T 22-04-2016 IPR010520 UPF0255 family APT61_RS17935 f99aaa5a767df4afd4d8b8dfcec4a966 414 Gene3D G3DSA:3.40.50.1820 157 301 1.3E-26 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS17935 f99aaa5a767df4afd4d8b8dfcec4a966 414 Gene3D G3DSA:3.40.50.1820 346 411 1.3E-26 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS17935 f99aaa5a767df4afd4d8b8dfcec4a966 414 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 2.3E-205 T 22-04-2016 IPR010520 UPF0255 family APT61_RS17935 f99aaa5a767df4afd4d8b8dfcec4a966 414 SUPERFAMILY SSF53474 46 413 3.09E-53 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS09190 795056e3d4bcc3ac67420d2c1f0187c1 360 SMART SM00937 63 178 1.6E-71 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APT61_RS09190 795056e3d4bcc3ac67420d2c1f0187c1 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APT61_RS09190 795056e3d4bcc3ac67420d2c1f0187c1 360 Gene3D G3DSA:1.20.58.410 6 93 3.2E-18 T 22-04-2016 APT61_RS09190 795056e3d4bcc3ac67420d2c1f0187c1 360 Pfam PF03462 PCRF domain 13 203 5.0E-76 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 APT61_RS09190 795056e3d4bcc3ac67420d2c1f0187c1 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 9.0E-176 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APT61_RS09190 795056e3d4bcc3ac67420d2c1f0187c1 360 Pfam PF00472 RF-1 domain 216 321 3.6E-41 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APT61_RS09190 795056e3d4bcc3ac67420d2c1f0187c1 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.151 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 APT61_RS09190 795056e3d4bcc3ac67420d2c1f0187c1 360 SUPERFAMILY SSF75620 12 353 1.19E-136 T 22-04-2016 APT61_RS09190 795056e3d4bcc3ac67420d2c1f0187c1 360 Gene3D G3DSA:3.30.160.20 215 288 1.6E-35 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain APT61_RS21000 1bc515013cfb4a8256b93dcab051f9a3 136 Pfam PF06146 Phosphate-starvation-inducible E 63 123 8.7E-17 T 22-04-2016 IPR020948 Phosphate-starvation-induced PsiE-like APT61_RS21000 1bc515013cfb4a8256b93dcab051f9a3 136 PANTHER PTHR37819 1 136 5.1E-50 T 22-04-2016 APT61_RS21000 1bc515013cfb4a8256b93dcab051f9a3 136 PANTHER PTHR37819:SF1 1 136 5.1E-50 T 22-04-2016 APT61_RS21000 1bc515013cfb4a8256b93dcab051f9a3 136 PIRSF PIRSF029598 1 136 2.0E-52 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 APT61_RS21000 1bc515013cfb4a8256b93dcab051f9a3 136 Hamap MF_01048 Protein PsiE [psiE]. 3 136 25.385 T 22-04-2016 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 APT61_RS04120 701cee4eda9f31ad63492d0957301a66 392 SUPERFAMILY SSF51905 265 381 1.11E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS04120 701cee4eda9f31ad63492d0957301a66 392 SUPERFAMILY SSF51905 2 175 1.11E-53 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS04120 701cee4eda9f31ad63492d0957301a66 392 Pfam PF01494 FAD binding domain 2 337 9.1E-28 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 APT61_RS04120 701cee4eda9f31ad63492d0957301a66 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 1.7E-141 T 22-04-2016 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 KEGG: 00130+1.14.13.-|KEGG: 00140+1.14.13.-|KEGG: 00232+1.14.13.-|KEGG: 00261+1.14.13.-|KEGG: 00340+1.14.13.-|KEGG: 00360+1.14.13.-|KEGG: 00361+1.14.13.-|KEGG: 00362+1.14.13.-|KEGG: 00363+1.14.13.-|KEGG: 00380+1.14.13.-|KEGG: 00403+1.14.13.-|KEGG: 00590+1.14.13.-|KEGG: 00591+1.14.13.-|KEGG: 00622+1.14.13.-|KEGG: 00623+1.14.13.-|KEGG: 00624+1.14.13.-|KEGG: 00625+1.14.13.-|KEGG: 00626+1.14.13.-|KEGG: 00627+1.14.13.-|KEGG: 00640+1.14.13.-|KEGG: 00643+1.14.13.-|KEGG: 00830+1.14.13.-|KEGG: 00903+1.14.13.-|KEGG: 00904+1.14.13.-|KEGG: 00905+1.14.13.-|KEGG: 00906+1.14.13.-|KEGG: 00930+1.14.13.-|KEGG: 00940+1.14.13.-|KEGG: 00941+1.14.13.-|KEGG: 00943+1.14.13.-|KEGG: 00945+1.14.13.-|KEGG: 00950+1.14.13.-|KEGG: 00966+1.14.13.-|KEGG: 00980+1.14.13.-|KEGG: 00982+1.14.13.-|KEGG: 00983+1.14.13.-|UniPathway: UPA00232 APT61_RS04120 701cee4eda9f31ad63492d0957301a66 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 22-04-2016 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 UniPathway: UPA00232 APT61_RS04120 701cee4eda9f31ad63492d0957301a66 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 387 9.1E-134 T 22-04-2016 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 UniPathway: UPA00232 APT61_RS04120 701cee4eda9f31ad63492d0957301a66 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 4.6E-14 T 22-04-2016 APT61_RS04120 701cee4eda9f31ad63492d0957301a66 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 4.6E-14 T 22-04-2016 APT61_RS04120 701cee4eda9f31ad63492d0957301a66 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 4.6E-14 T 22-04-2016 APT61_RS04120 701cee4eda9f31ad63492d0957301a66 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 4.6E-14 T 22-04-2016 APT61_RS04120 701cee4eda9f31ad63492d0957301a66 392 PANTHER PTHR13789:SF214 1 392 3.3E-198 T 22-04-2016 APT61_RS04120 701cee4eda9f31ad63492d0957301a66 392 Gene3D G3DSA:3.50.50.60 266 354 1.9E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS04120 701cee4eda9f31ad63492d0957301a66 392 Gene3D G3DSA:3.50.50.60 2 180 1.9E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS04120 701cee4eda9f31ad63492d0957301a66 392 PANTHER PTHR13789 1 392 3.3E-198 T 22-04-2016 APT61_RS15605 fbaa3291ad8a26abcb6ae299ef6a5ce8 346 Pfam PF00248 Aldo/keto reductase family 15 320 1.4E-83 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS15605 fbaa3291ad8a26abcb6ae299ef6a5ce8 346 PANTHER PTHR11732 1 339 5.6E-134 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS15605 fbaa3291ad8a26abcb6ae299ef6a5ce8 346 SUPERFAMILY SSF51430 1 320 6.94E-104 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS15605 fbaa3291ad8a26abcb6ae299ef6a5ce8 346 Gene3D G3DSA:3.20.20.100 9 326 6.6E-108 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS07350 ee2bfce6ce7f53455b0c51d9ef668528 306 SUPERFAMILY SSF56601 2 277 1.04E-60 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS07350 ee2bfce6ce7f53455b0c51d9ef668528 306 PANTHER PTHR21581:SF8 6 304 1.4E-181 T 22-04-2016 APT61_RS07350 ee2bfce6ce7f53455b0c51d9ef668528 306 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 261 2.8E-83 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 APT61_RS07350 ee2bfce6ce7f53455b0c51d9ef668528 306 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 7.46E-14 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APT61_RS07350 ee2bfce6ce7f53455b0c51d9ef668528 306 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 7.46E-14 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APT61_RS07350 ee2bfce6ce7f53455b0c51d9ef668528 306 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 7.46E-14 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 APT61_RS07350 ee2bfce6ce7f53455b0c51d9ef668528 306 PANTHER PTHR21581 6 304 1.4E-181 T 22-04-2016 APT61_RS07350 ee2bfce6ce7f53455b0c51d9ef668528 306 Gene3D G3DSA:3.40.710.10 23 277 3.3E-63 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 2.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 2.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 2.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 PRINTS PR00083 Histidinol dehydrogenase signature 109 136 2.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 PRINTS PR00083 Histidinol dehydrogenase signature 168 194 2.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 2.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 2.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 PRINTS PR00083 Histidinol dehydrogenase signature 198 223 2.9E-101 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 Pfam PF00815 Histidinol dehydrogenase 28 427 2.9E-163 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 SUPERFAMILY SSF53720 7 427 6.08E-88 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 36 426 2.4E-158 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 PANTHER PTHR21256:SF14 6 433 5.1E-295 T 22-04-2016 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 427 40.752 T 22-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 PIRSF PIRSF000099 1 430 5.1E-167 T 22-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 Gene3D G3DSA:3.40.50.1980 29 240 5.1E-81 T 22-04-2016 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 PANTHER PTHR21256 6 433 5.1E-295 T 22-04-2016 APT61_RS07855 6eb472c940791db9dda2ce72be7f861f 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 22-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 APT61_RS08985 fa3a442d81e69d6b96c190d03304dea3 461 TIGRFAM TIGR02332 HpaX: 4-hydroxyphenylacetate permease 32 444 3.5E-218 T 22-04-2016 IPR012707 4-hydroxyphenylacetate permease GO:1900754|GO:1901241 APT61_RS08985 fa3a442d81e69d6b96c190d03304dea3 461 Pfam PF07690 Major Facilitator Superfamily 44 418 2.4E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS08985 fa3a442d81e69d6b96c190d03304dea3 461 PANTHER PTHR11662:SF267 25 461 1.6E-262 T 22-04-2016 APT61_RS08985 fa3a442d81e69d6b96c190d03304dea3 461 Gene3D G3DSA:1.20.1250.20 34 235 3.6E-43 T 22-04-2016 APT61_RS08985 fa3a442d81e69d6b96c190d03304dea3 461 SUPERFAMILY SSF103473 1 458 2.62E-80 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS08985 fa3a442d81e69d6b96c190d03304dea3 461 Gene3D G3DSA:1.20.1250.20 274 457 5.7E-16 T 22-04-2016 APT61_RS08985 fa3a442d81e69d6b96c190d03304dea3 461 PANTHER PTHR11662 25 461 1.6E-262 T 22-04-2016 APT61_RS06860 97a2e03a0016ad310733e8927553e3ae 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 APT61_RS06860 97a2e03a0016ad310733e8927553e3ae 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 APT61_RS06860 97a2e03a0016ad310733e8927553e3ae 325 Pfam PF00146 NADH dehydrogenase 17 317 8.4E-121 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APT61_RS06860 97a2e03a0016ad310733e8927553e3ae 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 23.992 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APT61_RS06860 97a2e03a0016ad310733e8927553e3ae 325 PANTHER PTHR11432:SF8 1 321 1.7E-242 T 22-04-2016 APT61_RS06860 97a2e03a0016ad310733e8927553e3ae 325 PANTHER PTHR11432 1 321 1.7E-242 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 SUPERFAMILY SSF51735 1 246 3.29E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 3.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 Gene3D G3DSA:3.40.50.720 1 246 1.4E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 0.0061 T 22-04-2016 APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 PANTHER PTHR24322 12 139 6.9E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 PANTHER PTHR24322 156 188 6.9E-50 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 3.6E-12 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16580 9a620fb738d1977ad2369d2c35701d48 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 1.4E-58 T 22-04-2016 APT61_RS19305 59d9652c42fca69e76a5d9fcc6ce4fd2 429 PANTHER PTHR11820:SF8 99 193 1.1E-143 T 22-04-2016 APT61_RS19305 59d9652c42fca69e76a5d9fcc6ce4fd2 429 PANTHER PTHR11820:SF8 218 426 1.1E-143 T 22-04-2016 APT61_RS19305 59d9652c42fca69e76a5d9fcc6ce4fd2 429 Gene3D G3DSA:3.90.850.10 3 206 2.3E-48 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APT61_RS19305 59d9652c42fca69e76a5d9fcc6ce4fd2 429 PANTHER PTHR11820 99 193 1.1E-143 T 22-04-2016 APT61_RS19305 59d9652c42fca69e76a5d9fcc6ce4fd2 429 PANTHER PTHR11820 218 426 1.1E-143 T 22-04-2016 APT61_RS19305 59d9652c42fca69e76a5d9fcc6ce4fd2 429 SUPERFAMILY SSF56529 221 426 3.66E-73 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APT61_RS19305 59d9652c42fca69e76a5d9fcc6ce4fd2 429 SUPERFAMILY SSF56529 2 207 1.44E-51 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APT61_RS19305 59d9652c42fca69e76a5d9fcc6ce4fd2 429 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 214 425 1.6E-111 T 22-04-2016 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68|UniPathway: UPA00208|UniPathway: UPA00208 APT61_RS19305 59d9652c42fca69e76a5d9fcc6ce4fd2 429 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 226 423 5.1E-60 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APT61_RS19305 59d9652c42fca69e76a5d9fcc6ce4fd2 429 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 5 203 8.9E-39 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APT61_RS19305 59d9652c42fca69e76a5d9fcc6ce4fd2 429 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 3 203 1.3E-81 T 22-04-2016 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68|UniPathway: UPA00208|UniPathway: UPA00208 APT61_RS19305 59d9652c42fca69e76a5d9fcc6ce4fd2 429 Gene3D G3DSA:3.90.850.10 218 427 8.3E-79 T 22-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 APT61_RS09010 dc7d8cd22c9855d001d7b0ae7ac270c5 170 Gene3D G3DSA:3.10.450.50 7 160 2.7E-25 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS09010 dc7d8cd22c9855d001d7b0ae7ac270c5 170 SUPERFAMILY SSF54427 4 159 2.18E-20 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS09010 dc7d8cd22c9855d001d7b0ae7ac270c5 170 Pfam PF13577 SnoaL-like domain 10 146 2.0E-15 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain APT61_RS03665 84032bb61025bcf20bacc55245d1bcec 193 PANTHER PTHR10204:SF36 1 193 8.7E-134 T 22-04-2016 APT61_RS03665 84032bb61025bcf20bacc55245d1bcec 193 Gene3D G3DSA:3.40.50.360 1 192 5.9E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS03665 84032bb61025bcf20bacc55245d1bcec 193 Pfam PF02525 Flavodoxin-like fold 3 188 1.1E-35 T 22-04-2016 IPR003680 Flavodoxin-like fold APT61_RS03665 84032bb61025bcf20bacc55245d1bcec 193 PANTHER PTHR10204 1 193 8.7E-134 T 22-04-2016 APT61_RS03665 84032bb61025bcf20bacc55245d1bcec 193 SUPERFAMILY SSF52218 1 192 8.78E-42 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS16235 42c3b16b5d8d01903fc9288016fe6af3 176 TIGRFAM TIGR01752 flav_long: flavodoxin 4 169 1.7E-76 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 APT61_RS16235 42c3b16b5d8d01903fc9288016fe6af3 176 PIRSF PIRSF038996 1 172 2.6E-70 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 APT61_RS16235 42c3b16b5d8d01903fc9288016fe6af3 176 Gene3D G3DSA:3.40.50.360 1 168 4.6E-63 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS16235 42c3b16b5d8d01903fc9288016fe6af3 176 PANTHER PTHR19384 141 175 7.1E-111 T 22-04-2016 APT61_RS16235 42c3b16b5d8d01903fc9288016fe6af3 176 PANTHER PTHR19384 1 120 7.1E-111 T 22-04-2016 APT61_RS16235 42c3b16b5d8d01903fc9288016fe6af3 176 SUPERFAMILY SSF52218 4 169 3.74E-53 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS16235 42c3b16b5d8d01903fc9288016fe6af3 176 Pfam PF00258 Flavodoxin 6 160 1.9E-33 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 APT61_RS16235 42c3b16b5d8d01903fc9288016fe6af3 176 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 APT61_RS16235 42c3b16b5d8d01903fc9288016fe6af3 176 PANTHER PTHR19384:SF77 141 175 7.1E-111 T 22-04-2016 APT61_RS16235 42c3b16b5d8d01903fc9288016fe6af3 176 PANTHER PTHR19384:SF77 1 120 7.1E-111 T 22-04-2016 APT61_RS08200 fff3e9d62c774efbc48718c7106d0bfb 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 1.5E-38 T 22-04-2016 IPR019705 Protein of unknown function DUF2594 APT61_RS08110 ad18e227c0e3091d0bf4849cbacabdc7 104 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 2 104 2.5E-33 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APT61_RS08110 ad18e227c0e3091d0bf4849cbacabdc7 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 104 17.208 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APT61_RS08110 ad18e227c0e3091d0bf4849cbacabdc7 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 19 104 7.0E-25 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APT61_RS08110 ad18e227c0e3091d0bf4849cbacabdc7 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 3.1E-21 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APT61_RS08110 ad18e227c0e3091d0bf4849cbacabdc7 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 33 49 3.1E-21 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APT61_RS08110 ad18e227c0e3091d0bf4849cbacabdc7 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 3.1E-21 T 22-04-2016 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 APT61_RS08110 ad18e227c0e3091d0bf4849cbacabdc7 104 PANTHER PTHR34653 1 104 3.5E-24 T 22-04-2016 APT61_RS04480 3ab6f0e42da6346979844898b2d6676b 398 Gene3D G3DSA:3.40.630.40 169 266 5.0E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APT61_RS04480 3ab6f0e42da6346979844898b2d6676b 398 Gene3D G3DSA:3.40.630.40 313 389 5.0E-58 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APT61_RS04480 3ab6f0e42da6346979844898b2d6676b 398 PANTHER PTHR30404:SF0 1 390 4.8E-134 T 22-04-2016 APT61_RS04480 3ab6f0e42da6346979844898b2d6676b 398 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 171 385 3.6E-49 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APT61_RS04480 3ab6f0e42da6346979844898b2d6676b 398 SUPERFAMILY SSF53187 312 388 1.26E-51 T 22-04-2016 APT61_RS04480 3ab6f0e42da6346979844898b2d6676b 398 SUPERFAMILY SSF53187 169 265 1.26E-51 T 22-04-2016 APT61_RS04480 3ab6f0e42da6346979844898b2d6676b 398 SMART SM00646 231 385 1.7E-68 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 APT61_RS04480 3ab6f0e42da6346979844898b2d6676b 398 Pfam PF11741 AMIN domain 20 123 4.9E-27 T 22-04-2016 IPR021731 AMIN domain APT61_RS04480 3ab6f0e42da6346979844898b2d6676b 398 PANTHER PTHR30404 1 390 4.8E-134 T 22-04-2016 APT61_RS02610 59606d1f4ea4f8b038293b21f5d5658a 217 Gene3D G3DSA:3.40.50.880 1 216 5.5E-99 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS02610 59606d1f4ea4f8b038293b21f5d5658a 217 PIRSF PIRSF006320 1 216 1.4E-103 T 22-04-2016 IPR026041 Enhancing lycopene biosynthesis protein 2 APT61_RS02610 59606d1f4ea4f8b038293b21f5d5658a 217 PANTHER PTHR10224 1 217 1.2E-120 T 22-04-2016 APT61_RS02610 59606d1f4ea4f8b038293b21f5d5658a 217 SUPERFAMILY SSF52317 1 216 1.13E-63 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS22050 ed131ba622eb8b027a9146451937764d 338 Gene3D G3DSA:3.40.50.720 164 281 1.2E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS22050 ed131ba622eb8b027a9146451937764d 338 Pfam PF00107 Zinc-binding dehydrogenase 171 298 1.9E-19 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APT61_RS22050 ed131ba622eb8b027a9146451937764d 338 SUPERFAMILY SSF50129 1 170 6.24E-50 T 22-04-2016 IPR011032 GroES-like APT61_RS22050 ed131ba622eb8b027a9146451937764d 338 SMART SM00829 7 302 0.0017 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APT61_RS22050 ed131ba622eb8b027a9146451937764d 338 SUPERFAMILY SSF51735 138 302 6.76E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS22050 ed131ba622eb8b027a9146451937764d 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 130 9.5E-32 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 APT61_RS22050 ed131ba622eb8b027a9146451937764d 338 Gene3D G3DSA:3.90.180.10 1 163 6.8E-57 T 22-04-2016 IPR011032 GroES-like APT61_RS22050 ed131ba622eb8b027a9146451937764d 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 APT61_RS22050 ed131ba622eb8b027a9146451937764d 338 PANTHER PTHR11695:SF38 12 338 1.3E-109 T 22-04-2016 APT61_RS22050 ed131ba622eb8b027a9146451937764d 338 PANTHER PTHR11695 12 338 1.3E-109 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS19195 7a9529bd41e0f2825760ff9cbcecd8f3 147 Gene3D G3DSA:3.40.630.30 3 146 8.4E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS19195 7a9529bd41e0f2825760ff9cbcecd8f3 147 PANTHER PTHR23091 3 146 5.3E-36 T 22-04-2016 APT61_RS19195 7a9529bd41e0f2825760ff9cbcecd8f3 147 Pfam PF00583 Acetyltransferase (GNAT) family 47 120 1.3E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS19195 7a9529bd41e0f2825760ff9cbcecd8f3 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 142 6.2E-44 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 APT61_RS19195 7a9529bd41e0f2825760ff9cbcecd8f3 147 SUPERFAMILY SSF55729 3 146 2.19E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS19195 7a9529bd41e0f2825760ff9cbcecd8f3 147 PANTHER PTHR23091:SF247 3 146 5.3E-36 T 22-04-2016 APT61_RS14180 a7a9d8dc266661412af4bc78bacfbb3c 416 Gene3D G3DSA:1.20.1250.20 214 396 7.8E-30 T 22-04-2016 APT61_RS14180 a7a9d8dc266661412af4bc78bacfbb3c 416 Gene3D G3DSA:1.20.1250.20 11 194 2.7E-39 T 22-04-2016 APT61_RS14180 a7a9d8dc266661412af4bc78bacfbb3c 416 PANTHER PTHR23504 1 393 2.3E-119 T 22-04-2016 APT61_RS14180 a7a9d8dc266661412af4bc78bacfbb3c 416 SUPERFAMILY SSF103473 9 245 1.31E-46 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS14180 a7a9d8dc266661412af4bc78bacfbb3c 416 PRINTS PR01035 Tetracycline resistance protein signature 23 39 5.8E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS14180 a7a9d8dc266661412af4bc78bacfbb3c 416 PRINTS PR01035 Tetracycline resistance protein signature 85 109 5.8E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS14180 a7a9d8dc266661412af4bc78bacfbb3c 416 PRINTS PR01035 Tetracycline resistance protein signature 112 133 5.8E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS14180 a7a9d8dc266661412af4bc78bacfbb3c 416 PRINTS PR01035 Tetracycline resistance protein signature 142 164 5.8E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS14180 a7a9d8dc266661412af4bc78bacfbb3c 416 PRINTS PR01035 Tetracycline resistance protein signature 311 331 5.8E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS14180 a7a9d8dc266661412af4bc78bacfbb3c 416 PRINTS PR01035 Tetracycline resistance protein signature 346 369 5.8E-12 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS14180 a7a9d8dc266661412af4bc78bacfbb3c 416 Pfam PF07690 Major Facilitator Superfamily 18 261 4.0E-35 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS14180 a7a9d8dc266661412af4bc78bacfbb3c 416 PANTHER PTHR23504:SF14 1 393 2.3E-119 T 22-04-2016 APT61_RS14180 a7a9d8dc266661412af4bc78bacfbb3c 416 SUPERFAMILY SSF103473 215 403 6.93E-30 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS14180 a7a9d8dc266661412af4bc78bacfbb3c 416 Hamap MF_01528 Multidrug resistance protein MdtG [mdtG]. 1 404 49.191 T 22-04-2016 IPR023692 Multidrug resistance protein MdtG GO:0005215|GO:0005886 APT61_RS08955 ea01e4e2ba5e1953b344d1eeb15a8160 544 PANTHER PTHR23403:SF13 17 544 0.0 T 22-04-2016 APT61_RS08955 ea01e4e2ba5e1953b344d1eeb15a8160 544 PRINTS PR00744 Glycosyl hydrolase family 37 signature 436 452 1.4E-48 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS08955 ea01e4e2ba5e1953b344d1eeb15a8160 544 PRINTS PR00744 Glycosyl hydrolase family 37 signature 189 207 1.4E-48 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS08955 ea01e4e2ba5e1953b344d1eeb15a8160 544 PRINTS PR00744 Glycosyl hydrolase family 37 signature 329 346 1.4E-48 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS08955 ea01e4e2ba5e1953b344d1eeb15a8160 544 PRINTS PR00744 Glycosyl hydrolase family 37 signature 263 280 1.4E-48 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS08955 ea01e4e2ba5e1953b344d1eeb15a8160 544 PRINTS PR00744 Glycosyl hydrolase family 37 signature 372 388 1.4E-48 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS08955 ea01e4e2ba5e1953b344d1eeb15a8160 544 PRINTS PR00744 Glycosyl hydrolase family 37 signature 513 526 1.4E-48 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS08955 ea01e4e2ba5e1953b344d1eeb15a8160 544 PRINTS PR00744 Glycosyl hydrolase family 37 signature 297 314 1.4E-48 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS08955 ea01e4e2ba5e1953b344d1eeb15a8160 544 PANTHER PTHR23403 17 544 0.0 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS08955 ea01e4e2ba5e1953b344d1eeb15a8160 544 ProSitePatterns PS00928 Trehalase signature 2. 443 452 - T 22-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS08955 ea01e4e2ba5e1953b344d1eeb15a8160 544 Hamap MF_01060 Periplasmic trehalase [treA]. 1 531 82.449 T 22-04-2016 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 APT61_RS08955 ea01e4e2ba5e1953b344d1eeb15a8160 544 ProSitePatterns PS00927 Trehalase signature 1. 147 160 - T 22-04-2016 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS08955 ea01e4e2ba5e1953b344d1eeb15a8160 544 Pfam PF01204 Trehalase 53 528 2.3E-168 T 22-04-2016 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28 APT61_RS08955 ea01e4e2ba5e1953b344d1eeb15a8160 544 SUPERFAMILY SSF48208 36 532 3.5E-167 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APT61_RS05380 a1b0f83bceba6f5960b7b8db408ca95c 161 PANTHER PTHR34821 1 158 1.3E-27 T 22-04-2016 APT61_RS05380 a1b0f83bceba6f5960b7b8db408ca95c 161 PANTHER PTHR34821:SF2 1 158 1.3E-27 T 22-04-2016 APT61_RS05380 a1b0f83bceba6f5960b7b8db408ca95c 161 Pfam PF04657 Putative inner membrane exporter, YdcZ 5 139 1.2E-33 T 22-04-2016 IPR006750 Putative inner membrane exporter, YdcZ APT61_RS19515 21c3b281b16f6c5e0cf22d83f4d23b5c 456 PANTHER PTHR11699 1 456 2.9E-298 T 22-04-2016 APT61_RS19515 21c3b281b16f6c5e0cf22d83f4d23b5c 456 SUPERFAMILY SSF53720 3 455 5.5E-146 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS19515 21c3b281b16f6c5e0cf22d83f4d23b5c 456 Pfam PF00171 Aldehyde dehydrogenase family 3 452 3.4E-141 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS19515 21c3b281b16f6c5e0cf22d83f4d23b5c 456 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 228 235 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APT61_RS19515 21c3b281b16f6c5e0cf22d83f4d23b5c 456 Gene3D G3DSA:3.40.309.10 242 427 6.0E-66 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS19515 21c3b281b16f6c5e0cf22d83f4d23b5c 456 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 256 267 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APT61_RS19515 21c3b281b16f6c5e0cf22d83f4d23b5c 456 PANTHER PTHR11699:SF205 1 456 2.9E-298 T 22-04-2016 APT61_RS19515 21c3b281b16f6c5e0cf22d83f4d23b5c 456 Gene3D G3DSA:3.40.605.10 3 241 4.2E-69 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS01360 a2fb4c9a303e33cbc8651d5b061bc618 773 Pfam PF03176 MMPL family 254 398 2.0E-8 T 22-04-2016 IPR004869 Membrane transport protein, MMPL domain GO:0016020 APT61_RS01360 a2fb4c9a303e33cbc8651d5b061bc618 773 SUPERFAMILY SSF82866 639 767 3.14E-17 T 22-04-2016 APT61_RS01360 a2fb4c9a303e33cbc8651d5b061bc618 773 SUPERFAMILY SSF82866 225 405 7.19E-21 T 22-04-2016 APT61_RS01360 a2fb4c9a303e33cbc8651d5b061bc618 773 Gene3D G3DSA:1.20.1640.10 245 405 1.8E-19 T 22-04-2016 APT61_RS01360 a2fb4c9a303e33cbc8651d5b061bc618 773 Gene3D G3DSA:1.20.1640.10 607 706 7.4E-11 T 22-04-2016 APT61_RS12990 1b80996f5092273aa0208f0f03d89839 154 SUPERFAMILY SSF54001 33 154 3.27E-38 T 22-04-2016 APT61_RS12990 1b80996f5092273aa0208f0f03d89839 154 Gene3D G3DSA:3.90.1720.10 39 154 6.7E-39 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS12990 1b80996f5092273aa0208f0f03d89839 154 PANTHER PTHR21666 15 154 3.1E-40 T 22-04-2016 APT61_RS12990 1b80996f5092273aa0208f0f03d89839 154 Pfam PF00877 NlpC/P60 family 47 153 9.7E-30 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS12965 3bc9d121b5c2cf647a91779bd2715dd9 273 SUPERFAMILY SSF53807 21 266 2.51E-47 T 22-04-2016 APT61_RS12965 3bc9d121b5c2cf647a91779bd2715dd9 273 Gene3D G3DSA:3.40.50.1980 21 139 1.5E-24 T 22-04-2016 APT61_RS12965 3bc9d121b5c2cf647a91779bd2715dd9 273 Gene3D G3DSA:3.40.50.1980 140 267 2.7E-17 T 22-04-2016 APT61_RS12965 3bc9d121b5c2cf647a91779bd2715dd9 273 Pfam PF01497 Periplasmic binding protein 23 248 3.7E-32 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 APT61_RS12965 3bc9d121b5c2cf647a91779bd2715dd9 273 PANTHER PTHR30535:SF4 21 268 1.1E-83 T 22-04-2016 APT61_RS12965 3bc9d121b5c2cf647a91779bd2715dd9 273 PANTHER PTHR30535 21 268 1.1E-83 T 22-04-2016 APT61_RS15455 3d6e4de479888a5dd7189b750c3eb785 372 Gene3D G3DSA:2.120.10.30 11 370 2.5E-109 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like APT61_RS15455 3d6e4de479888a5dd7189b750c3eb785 372 Pfam PF07995 Glucose / Sorbosone dehydrogenase 34 366 1.9E-131 T 22-04-2016 IPR012938 Glucose/Sorbosone dehydrogenase GO:0005975|GO:0016901|GO:0048038 APT61_RS15455 3d6e4de479888a5dd7189b750c3eb785 372 PANTHER PTHR19328 20 369 4.6E-83 T 22-04-2016 APT61_RS15455 3d6e4de479888a5dd7189b750c3eb785 372 SUPERFAMILY SSF50952 21 370 3.53E-45 T 22-04-2016 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 APT61_RS17990 da25cb8bbd21a73383ec2a8b8c064ef7 447 PANTHER PTHR37839 1 447 2.0E-215 T 22-04-2016 APT61_RS17990 da25cb8bbd21a73383ec2a8b8c064ef7 447 PANTHER PTHR37839:SF1 1 447 2.0E-215 T 22-04-2016 APT61_RS17990 da25cb8bbd21a73383ec2a8b8c064ef7 447 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 447 2.9E-182 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 APT61_RS17990 da25cb8bbd21a73383ec2a8b8c064ef7 447 Pfam PF11973 NQRA C-terminal domain 262 310 5.4E-18 T 22-04-2016 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 APT61_RS17990 da25cb8bbd21a73383ec2a8b8c064ef7 447 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 447 46.218 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 APT61_RS17990 da25cb8bbd21a73383ec2a8b8c064ef7 447 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 257 1.5E-109 T 22-04-2016 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 APT61_RS19010 bab4f65d34dd6326cfebe0b457a3cd0a 357 Gene3D G3DSA:1.10.3470.10 26 355 3.6E-98 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS19010 bab4f65d34dd6326cfebe0b457a3cd0a 357 SUPERFAMILY SSF81345 20 352 1.96E-78 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS19010 bab4f65d34dd6326cfebe0b457a3cd0a 357 Pfam PF01032 FecCD transport family 38 352 1.6E-85 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS19010 bab4f65d34dd6326cfebe0b457a3cd0a 357 PANTHER PTHR30472 16 357 6.4E-160 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS19010 bab4f65d34dd6326cfebe0b457a3cd0a 357 PANTHER PTHR30472:SF25 16 357 6.4E-160 T 22-04-2016 APT61_RS15735 9486fdeeacb497e37949a1b0cc1b58d2 167 Gene3D G3DSA:2.60.40.1090 22 167 3.2E-30 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APT61_RS15735 9486fdeeacb497e37949a1b0cc1b58d2 167 PANTHER PTHR33420 5 167 5.8E-31 T 22-04-2016 APT61_RS15735 9486fdeeacb497e37949a1b0cc1b58d2 167 SUPERFAMILY SSF49401 22 167 1.94E-28 T 22-04-2016 IPR008966 Adhesion domain APT61_RS15735 9486fdeeacb497e37949a1b0cc1b58d2 167 Pfam PF00419 Fimbrial protein 24 167 1.3E-11 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 0.0088 T 22-04-2016 APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 PANTHER PTHR24322 155 186 2.3E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 PANTHER PTHR24322 10 137 2.3E-49 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 1.0E-68 T 22-04-2016 APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.7E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.4E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.4E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.4E-13 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 SUPERFAMILY SSF51735 4 248 3.66E-82 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05185 79bae5d8fb700a845ac5c138c3d7b535 249 Gene3D G3DSA:3.40.50.720 3 248 2.2E-83 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS19600 06733246a8b9ac06c289b0ccb8a03315 159 Gene3D G3DSA:1.20.1290.10 2 146 1.6E-49 T 22-04-2016 IPR029032 AhpD-like APT61_RS19600 06733246a8b9ac06c289b0ccb8a03315 159 Pfam PF02627 Carboxymuconolactone decarboxylase family 12 93 2.7E-18 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS19600 06733246a8b9ac06c289b0ccb8a03315 159 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 78 4.2E-16 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS19600 06733246a8b9ac06c289b0ccb8a03315 159 SUPERFAMILY SSF69118 5 145 1.11E-42 T 22-04-2016 IPR029032 AhpD-like APT61_RS07390 5b3644934311e5ac2aa83c5dc96fe8f5 244 SUPERFAMILY SSF46955 3 92 2.88E-19 T 22-04-2016 IPR009061 Putative DNA-binding domain APT61_RS07390 5b3644934311e5ac2aa83c5dc96fe8f5 244 PANTHER PTHR30204:SF19 1 241 6.9E-105 T 22-04-2016 APT61_RS07390 5b3644934311e5ac2aa83c5dc96fe8f5 244 SMART SM00422 4 73 2.9E-25 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS07390 5b3644934311e5ac2aa83c5dc96fe8f5 244 Pfam PF13411 MerR HTH family regulatory protein 4 71 1.5E-17 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS07390 5b3644934311e5ac2aa83c5dc96fe8f5 244 PANTHER PTHR30204 1 241 6.9E-105 T 22-04-2016 APT61_RS07390 5b3644934311e5ac2aa83c5dc96fe8f5 244 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS07390 5b3644934311e5ac2aa83c5dc96fe8f5 244 Gene3D G3DSA:1.10.1660.10 4 107 7.1E-20 T 22-04-2016 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 375 381 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 PRINTS PR01836 Magnesium-transporting ATPase signature 407 420 3.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 PRINTS PR01836 Magnesium-transporting ATPase signature 854 875 3.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 PRINTS PR01836 Magnesium-transporting ATPase signature 717 728 3.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 PRINTS PR01836 Magnesium-transporting ATPase signature 749 762 3.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 PRINTS PR01836 Magnesium-transporting ATPase signature 699 714 3.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 PRINTS PR01836 Magnesium-transporting ATPase signature 804 825 3.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 PRINTS PR01836 Magnesium-transporting ATPase signature 286 302 3.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 PRINTS PR01836 Magnesium-transporting ATPase signature 303 322 3.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 PRINTS PR01836 Magnesium-transporting ATPase signature 769 785 3.5E-84 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 PANTHER PTHR24093 46 900 0.0 T 22-04-2016 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 609 730 4.1E-31 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 125 407 3.7E-36 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 PANTHER PTHR24093:SF356 46 900 0.0 T 22-04-2016 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 SUPERFAMILY SSF81665 274 367 3.53E-100 T 22-04-2016 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 SUPERFAMILY SSF81665 690 898 3.53E-100 T 22-04-2016 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 SUPERFAMILY SSF81665 50 157 3.53E-100 T 22-04-2016 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 Pfam PF00690 Cation transporter/ATPase, N-terminus 50 114 3.9E-13 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 Gene3D G3DSA:2.70.150.10 63 99 3.2E-41 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 Gene3D G3DSA:2.70.150.10 152 273 3.2E-41 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 SUPERFAMILY SSF81653 170 272 2.35E-28 T 22-04-2016 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 Pfam PF00122 E1-E2 ATPase 125 364 3.2E-57 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 Gene3D G3DSA:3.40.1110.10 365 548 1.1E-36 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 Gene3D G3DSA:1.20.1110.10 610 892 2.4E-67 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 Gene3D G3DSA:1.20.1110.10 100 151 2.4E-67 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 SMART SM00831 46 119 2.0E-6 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 39 900 0.0 T 22-04-2016 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 Pfam PF00689 Cation transporting ATPase, C-terminus 724 890 3.0E-14 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 Pfam PF00702 haloacid dehalogenase-like hydrolase 369 655 5.9E-19 T 22-04-2016 APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 SUPERFAMILY SSF56784 534 685 6.95E-39 T 22-04-2016 IPR023214 HAD-like domain APT61_RS19930 379bed7b4aaa97d3b69bf2d462d4ba6c 900 SUPERFAMILY SSF81660 342 545 2.62E-40 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 APT61_RS00395 e386dc533369e5c24ba2fcf80703f921 104 PANTHER PTHR34389 1 103 2.6E-58 T 22-04-2016 APT61_RS00395 e386dc533369e5c24ba2fcf80703f921 104 PANTHER PTHR34389:SF2 1 103 2.6E-58 T 22-04-2016 APT61_RS00395 e386dc533369e5c24ba2fcf80703f921 104 Pfam PF05336 Domain of unknown function (DUF718) 3 103 4.2E-30 T 22-04-2016 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 UniPathway: UPA00125 APT61_RS00395 e386dc533369e5c24ba2fcf80703f921 104 SUPERFAMILY SSF54909 1 103 1.07E-38 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS00395 e386dc533369e5c24ba2fcf80703f921 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 32.253 T 22-04-2016 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 UniPathway: UPA00125 APT61_RS00395 e386dc533369e5c24ba2fcf80703f921 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 103 6.2E-57 T 22-04-2016 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 UniPathway: UPA00125 APT61_RS08160 2f850bb5fb80af6df7e068266e68886c 266 Gene3D G3DSA:3.90.550.10 6 188 4.7E-7 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS08160 2f850bb5fb80af6df7e068266e68886c 266 Pfam PF00535 Glycosyl transferase family 2 9 84 6.1E-6 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APT61_RS08160 2f850bb5fb80af6df7e068266e68886c 266 SUPERFAMILY SSF53448 5 192 2.25E-18 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS20770 18550af8f3a6a823874ed7a32f3af047 224 Pfam PF08238 Sel1 repeat 175 210 2.6E-4 T 22-04-2016 IPR006597 Sel1-like repeat APT61_RS20770 18550af8f3a6a823874ed7a32f3af047 224 Pfam PF08238 Sel1 repeat 115 130 30.0 T 22-04-2016 IPR006597 Sel1-like repeat APT61_RS20770 18550af8f3a6a823874ed7a32f3af047 224 Pfam PF08238 Sel1 repeat 138 170 3.9E-4 T 22-04-2016 IPR006597 Sel1-like repeat APT61_RS20770 18550af8f3a6a823874ed7a32f3af047 224 Pfam PF08238 Sel1 repeat 33 64 0.034 T 22-04-2016 IPR006597 Sel1-like repeat APT61_RS20770 18550af8f3a6a823874ed7a32f3af047 224 PANTHER PTHR11102:SF11 18 211 8.8E-22 T 22-04-2016 APT61_RS20770 18550af8f3a6a823874ed7a32f3af047 224 PANTHER PTHR11102 18 211 8.8E-22 T 22-04-2016 APT61_RS20770 18550af8f3a6a823874ed7a32f3af047 224 Gene3D G3DSA:1.25.40.10 24 221 4.4E-31 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS20770 18550af8f3a6a823874ed7a32f3af047 224 SMART SM00671 137 172 2.1E-5 T 22-04-2016 IPR006597 Sel1-like repeat APT61_RS20770 18550af8f3a6a823874ed7a32f3af047 224 SMART SM00671 33 64 0.0045 T 22-04-2016 IPR006597 Sel1-like repeat APT61_RS20770 18550af8f3a6a823874ed7a32f3af047 224 SMART SM00671 174 211 0.061 T 22-04-2016 IPR006597 Sel1-like repeat APT61_RS20770 18550af8f3a6a823874ed7a32f3af047 224 SMART SM00671 97 132 130.0 T 22-04-2016 IPR006597 Sel1-like repeat APT61_RS20770 18550af8f3a6a823874ed7a32f3af047 224 SUPERFAMILY SSF48452 24 92 1.86E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS20770 18550af8f3a6a823874ed7a32f3af047 224 SUPERFAMILY SSF81901 75 212 7.85E-18 T 22-04-2016 APT61_RS01550 5c053744f52201d437f867a5219cc029 438 Pfam PF13416 Bacterial extracellular solute-binding protein 44 367 4.4E-43 T 22-04-2016 APT61_RS01550 5c053744f52201d437f867a5219cc029 438 SUPERFAMILY SSF53850 25 425 2.02E-77 T 22-04-2016 APT61_RS01550 5c053744f52201d437f867a5219cc029 438 PANTHER PTHR30061 1 438 1.2E-177 T 22-04-2016 APT61_RS01550 5c053744f52201d437f867a5219cc029 438 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 22-04-2016 IPR006061 Solute-binding family 1, conserved site GO:0005215|GO:0006810 APT61_RS01550 5c053744f52201d437f867a5219cc029 438 Gene3D G3DSA:3.40.190.10 145 345 9.8E-41 T 22-04-2016 APT61_RS01550 5c053744f52201d437f867a5219cc029 438 PANTHER PTHR30061:SF7 1 438 1.2E-177 T 22-04-2016 APT61_RS12995 a341d9fb21ffd2b0a38b3218fb027572 251 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS12995 a341d9fb21ffd2b0a38b3218fb027572 251 Gene3D G3DSA:3.40.50.300 16 230 2.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12995 a341d9fb21ffd2b0a38b3218fb027572 251 PANTHER PTHR24220:SF462 2 246 5.6E-114 T 22-04-2016 APT61_RS12995 a341d9fb21ffd2b0a38b3218fb027572 251 SUPERFAMILY SSF52540 16 225 3.77E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12995 a341d9fb21ffd2b0a38b3218fb027572 251 PANTHER PTHR24220 2 246 5.6E-114 T 22-04-2016 APT61_RS12995 a341d9fb21ffd2b0a38b3218fb027572 251 SMART SM00382 25 210 3.3E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS12995 a341d9fb21ffd2b0a38b3218fb027572 251 Pfam PF00005 ABC transporter 16 162 1.2E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS19935 e67e226990fb5e5773ce9f21915768fb 315 Gene3D G3DSA:1.10.260.40 3 53 2.1E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS19935 e67e226990fb5e5773ce9f21915768fb 315 SUPERFAMILY SSF47413 3 60 1.33E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS19935 e67e226990fb5e5773ce9f21915768fb 315 Pfam PF13377 Periplasmic binding protein-like domain 168 314 5.9E-18 T 22-04-2016 APT61_RS19935 e67e226990fb5e5773ce9f21915768fb 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS19935 e67e226990fb5e5773ce9f21915768fb 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS19935 e67e226990fb5e5773ce9f21915768fb 315 SUPERFAMILY SSF53822 63 314 1.26E-57 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS19935 e67e226990fb5e5773ce9f21915768fb 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 314 3.8E-165 T 22-04-2016 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 APT61_RS19935 e67e226990fb5e5773ce9f21915768fb 315 SMART SM00354 4 74 2.4E-31 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS19935 e67e226990fb5e5773ce9f21915768fb 315 Gene3D G3DSA:3.40.50.2300 54 174 1.2E-18 T 22-04-2016 APT61_RS19935 e67e226990fb5e5773ce9f21915768fb 315 PANTHER PTHR30146:SF42 4 309 9.5E-205 T 22-04-2016 APT61_RS19935 e67e226990fb5e5773ce9f21915768fb 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 5.8E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS19935 e67e226990fb5e5773ce9f21915768fb 315 Gene3D G3DSA:3.40.50.2300 175 279 2.6E-38 T 22-04-2016 APT61_RS19935 e67e226990fb5e5773ce9f21915768fb 315 PANTHER PTHR30146 4 309 9.5E-205 T 22-04-2016 APT61_RS19935 e67e226990fb5e5773ce9f21915768fb 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS12765 9bb184718d9a0ac60d07395d51e3dacd 536 SUPERFAMILY SSF51905 1 214 5.57E-16 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS12765 9bb184718d9a0ac60d07395d51e3dacd 536 Pfam PF13454 FAD-NAD(P)-binding 5 164 9.9E-29 T 22-04-2016 APT61_RS12765 9bb184718d9a0ac60d07395d51e3dacd 536 Gene3D G3DSA:3.40.50.720 123 216 9.2E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS12765 9bb184718d9a0ac60d07395d51e3dacd 536 Gene3D G3DSA:3.40.50.720 2 67 9.2E-20 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS04015 b37ce1ba8db5e384d52ad8858de56e99 165 PANTHER PTHR38773 2 163 2.5E-88 T 22-04-2016 APT61_RS04015 b37ce1ba8db5e384d52ad8858de56e99 165 Hamap MF_00746 Protein SprT [sprT]. 12 165 39.967 T 22-04-2016 IPR023483 Uncharacterised protein family SprT APT61_RS04015 b37ce1ba8db5e384d52ad8858de56e99 165 SMART SM00731 16 165 3.6E-60 T 22-04-2016 IPR006640 SprT-like APT61_RS04015 b37ce1ba8db5e384d52ad8858de56e99 165 Pfam PF10263 SprT-like family 21 161 1.6E-27 T 22-04-2016 IPR006640 SprT-like APT61_RS19310 c2fc763a283a15bbae7fc38a904a5efe 488 SUPERFAMILY SSF53720 3 480 7.46E-168 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS19310 c2fc763a283a15bbae7fc38a904a5efe 488 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 4 487 1.3E-223 T 22-04-2016 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 KEGG: 00010+1.2.1.-|KEGG: 00220+1.2.1.-|KEGG: 00260+1.2.1.-|KEGG: 00281+1.2.1.-|KEGG: 00300+1.2.1.-|KEGG: 00330+1.2.1.-|KEGG: 00380+1.2.1.-|KEGG: 00620+1.2.1.-|KEGG: 00624+1.2.1.-|KEGG: 00626+1.2.1.-|KEGG: 00640+1.2.1.-|KEGG: 00903+1.2.1.-|UniPathway: UPA00208 APT61_RS19310 c2fc763a283a15bbae7fc38a904a5efe 488 Gene3D G3DSA:3.40.309.10 258 449 9.0E-69 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS19310 c2fc763a283a15bbae7fc38a904a5efe 488 PANTHER PTHR11699:SF213 1 486 1.7E-275 T 22-04-2016 APT61_RS19310 c2fc763a283a15bbae7fc38a904a5efe 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APT61_RS19310 c2fc763a283a15bbae7fc38a904a5efe 488 Gene3D G3DSA:3.40.605.10 2 257 9.6E-98 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS19310 c2fc763a283a15bbae7fc38a904a5efe 488 PANTHER PTHR11699 1 486 1.7E-275 T 22-04-2016 APT61_RS19310 c2fc763a283a15bbae7fc38a904a5efe 488 Pfam PF00171 Aldehyde dehydrogenase family 16 474 1.4E-171 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS19310 c2fc763a283a15bbae7fc38a904a5efe 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APT61_RS03890 bd0200889b9690097d46d7598a65a405 113 SUPERFAMILY SSF51197 4 101 4.53E-32 T 22-04-2016 APT61_RS03890 bd0200889b9690097d46d7598a65a405 113 PIRSF PIRSF020632 3 112 8.5E-60 T 22-04-2016 IPR014510 Tellurite resistance predicted, YeaR APT61_RS03890 bd0200889b9690097d46d7598a65a405 113 Gene3D G3DSA:2.60.120.10 2 111 9.3E-43 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS03890 bd0200889b9690097d46d7598a65a405 113 Pfam PF09313 Domain of unknown function (DUF1971) 14 94 5.9E-26 T 22-04-2016 IPR015392 Domain of unknown function DUF1971 APT61_RS05360 67d6ce842eb617138ecccabca8058e76 164 SUPERFAMILY SSF47240 1 154 9.92E-51 T 22-04-2016 IPR009078 Ferritin-like superfamily APT61_RS05360 67d6ce842eb617138ecccabca8058e76 164 PANTHER PTHR30565 1 163 1.6E-72 T 22-04-2016 APT61_RS05360 67d6ce842eb617138ecccabca8058e76 164 Pfam PF05974 Domain of unknown function (DUF892) 6 163 3.0E-56 T 22-04-2016 IPR010287 Domain of unknown function DUF892 APT61_RS05360 67d6ce842eb617138ecccabca8058e76 164 Gene3D G3DSA:1.20.1260.10 1 163 1.4E-65 T 22-04-2016 IPR012347 Ferritin-related APT61_RS07070 c8ed7e4203041edf122684cd87987856 394 SUPERFAMILY SSF103473 14 388 5.49E-57 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS07070 c8ed7e4203041edf122684cd87987856 394 Pfam PF07690 Major Facilitator Superfamily 243 388 2.8E-14 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS07070 c8ed7e4203041edf122684cd87987856 394 Pfam PF07690 Major Facilitator Superfamily 22 209 3.3E-24 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS07070 c8ed7e4203041edf122684cd87987856 394 PANTHER PTHR23518:SF2 10 388 3.5E-101 T 22-04-2016 APT61_RS07070 c8ed7e4203041edf122684cd87987856 394 PANTHER PTHR23518 10 388 3.5E-101 T 22-04-2016 APT61_RS07070 c8ed7e4203041edf122684cd87987856 394 Gene3D G3DSA:1.20.1250.20 15 199 1.1E-25 T 22-04-2016 APT61_RS07070 c8ed7e4203041edf122684cd87987856 394 Gene3D G3DSA:1.20.1250.20 223 387 1.7E-20 T 22-04-2016 APT61_RS18760 4681cc198ad38f944bf63114f16a4d8e 138 PANTHER PTHR39515 1 138 1.1E-17 T 22-04-2016 APT61_RS18760 4681cc198ad38f944bf63114f16a4d8e 138 SUPERFAMILY SSF46785 29 136 1.26E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18760 4681cc198ad38f944bf63114f16a4d8e 138 Pfam PF01047 MarR family 33 87 1.0E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS18760 4681cc198ad38f944bf63114f16a4d8e 138 PANTHER PTHR39515:SF1 1 138 1.1E-17 T 22-04-2016 APT61_RS18760 4681cc198ad38f944bf63114f16a4d8e 138 Gene3D G3DSA:1.10.10.10 20 137 1.5E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18760 4681cc198ad38f944bf63114f16a4d8e 138 SMART SM00347 23 123 3.8E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS21270 5900ac924cd8079713fd0d6d867d7994 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 3.9E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS21270 5900ac924cd8079713fd0d6d867d7994 300 SUPERFAMILY SSF161098 93 280 8.37E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS21270 5900ac924cd8079713fd0d6d867d7994 300 Gene3D G3DSA:1.10.3720.10 88 296 2.1E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS21270 5900ac924cd8079713fd0d6d867d7994 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 2.1E-15 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT61_RS21270 5900ac924cd8079713fd0d6d867d7994 300 PANTHER PTHR30465 10 300 3.0E-142 T 22-04-2016 APT61_RS21270 5900ac924cd8079713fd0d6d867d7994 300 PANTHER PTHR30465:SF10 10 300 3.0E-142 T 22-04-2016 APT61_RS08530 104ed4df89d1cd5184c4973c6340fc32 246 PANTHER PTHR10108 1 241 1.9E-113 T 22-04-2016 APT61_RS08530 104ed4df89d1cd5184c4973c6340fc32 246 Gene3D G3DSA:3.40.50.150 19 241 2.0E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS08530 104ed4df89d1cd5184c4973c6340fc32 246 PANTHER PTHR10108:SF809 1 241 1.9E-113 T 22-04-2016 APT61_RS08530 104ed4df89d1cd5184c4973c6340fc32 246 SUPERFAMILY SSF53335 20 242 1.53E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS08530 104ed4df89d1cd5184c4973c6340fc32 246 PIRSF PIRSF006325 1 243 1.5E-131 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 APT61_RS08530 104ed4df89d1cd5184c4973c6340fc32 246 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 1.6E-132 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 APT61_RS08530 104ed4df89d1cd5184c4973c6340fc32 246 Pfam PF13649 Methyltransferase domain 60 158 2.3E-13 T 22-04-2016 APT61_RS08530 104ed4df89d1cd5184c4973c6340fc32 246 Hamap MF_01589 tRNA (cmo5U34)-methyltransferase [cmoA]. 3 242 42.477 T 22-04-2016 IPR005271 tRNA (cmo5U34)-methyltransferase GO:0002098|GO:0016300 APT61_RS09525 a63d9f9aadb8f94ac650f241c472423f 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 145 2.6E-34 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS09525 a63d9f9aadb8f94ac650f241c472423f 163 SUPERFAMILY SSF141452 3 160 5.36E-40 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS09525 a63d9f9aadb8f94ac650f241c472423f 163 PANTHER PTHR34319 1 163 3.0E-70 T 22-04-2016 APT61_RS09525 a63d9f9aadb8f94ac650f241c472423f 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 3.4E-42 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS09525 a63d9f9aadb8f94ac650f241c472423f 163 Gene3D G3DSA:2.30.110.20 1 159 1.3E-30 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS09525 a63d9f9aadb8f94ac650f241c472423f 163 PANTHER PTHR34319:SF2 1 163 3.0E-70 T 22-04-2016 APT61_RS11300 cec2d92474465598c5033fbab4594534 234 SUPERFAMILY SSF46894 161 232 4.08E-18 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS11300 cec2d92474465598c5033fbab4594534 234 Gene3D G3DSA:1.10.10.10 160 232 4.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11300 cec2d92474465598c5033fbab4594534 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 208 220 1.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS11300 cec2d92474465598c5033fbab4594534 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 192 1.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS11300 cec2d92474465598c5033fbab4594534 234 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 208 1.9E-11 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS11300 cec2d92474465598c5033fbab4594534 234 Pfam PF00196 Bacterial regulatory proteins, luxR family 177 230 9.3E-15 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS11300 cec2d92474465598c5033fbab4594534 234 SMART SM00421 175 232 1.9E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 PANTHER PTHR11575 1 543 7.7E-249 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 SUPERFAMILY SSF55816 363 543 2.62E-54 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 Gene3D G3DSA:3.60.21.10 28 361 7.5E-97 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 PANTHER PTHR11575:SF27 1 543 7.7E-249 T 22-04-2016 APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 509 4.4E-32 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 SUPERFAMILY SSF56300 27 361 1.12E-95 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 PRINTS PR01607 Apyrase family signature 283 303 2.1E-62 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 PRINTS PR01607 Apyrase family signature 484 503 2.1E-62 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 PRINTS PR01607 Apyrase family signature 207 224 2.1E-62 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 PRINTS PR01607 Apyrase family signature 238 261 2.1E-62 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 PRINTS PR01607 Apyrase family signature 417 440 2.1E-62 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 PRINTS PR01607 Apyrase family signature 32 50 2.1E-62 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 Gene3D G3DSA:3.90.780.10 363 540 2.9E-56 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 APT61_RS17085 0a5504bf664b3229fae6c722a47fc8aa 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 2.3E-17 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APT61_RS18035 1b3136130401c06f5a3848621dfe6513 238 Gene3D G3DSA:3.40.50.150 77 206 2.0E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS18035 1b3136130401c06f5a3848621dfe6513 238 SUPERFAMILY SSF53335 77 207 6.16E-17 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS18035 1b3136130401c06f5a3848621dfe6513 238 PANTHER PTHR10108:SF836 77 219 4.5E-86 T 22-04-2016 APT61_RS18035 1b3136130401c06f5a3848621dfe6513 238 Pfam PF08241 Methyltransferase domain 77 125 1.1E-9 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 APT61_RS18035 1b3136130401c06f5a3848621dfe6513 238 PANTHER PTHR10108 77 219 4.5E-86 T 22-04-2016 APT61_RS02065 cf13c6811d5017a3d62f69e24c4fb146 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 34.057 T 22-04-2016 IPR013005 50S ribosomal protein uL4 APT61_RS02065 cf13c6811d5017a3d62f69e24c4fb146 201 Gene3D G3DSA:3.40.1370.10 54 201 1.7E-59 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APT61_RS02065 cf13c6811d5017a3d62f69e24c4fb146 201 PANTHER PTHR10746 11 200 3.8E-94 T 22-04-2016 IPR013005 50S ribosomal protein uL4 APT61_RS02065 cf13c6811d5017a3d62f69e24c4fb146 201 SUPERFAMILY SSF52166 10 200 4.71E-73 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 APT61_RS02065 cf13c6811d5017a3d62f69e24c4fb146 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 5.1E-75 T 22-04-2016 IPR013005 50S ribosomal protein uL4 APT61_RS02065 cf13c6811d5017a3d62f69e24c4fb146 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 3.8E-64 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 APT61_RS01395 31c22af4c2c44ef510a1ff1af279bf1d 84 Pfam PF00550 Phosphopantetheine attachment site 11 77 3.7E-12 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS01395 31c22af4c2c44ef510a1ff1af279bf1d 84 Gene3D G3DSA:1.10.1200.10 4 82 6.8E-19 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS01395 31c22af4c2c44ef510a1ff1af279bf1d 84 SUPERFAMILY SSF47336 6 82 4.58E-18 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS01395 31c22af4c2c44ef510a1ff1af279bf1d 84 Hamap MF_01217 Acyl carrier protein [acpP]. 7 81 13.84 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APT61_RS01395 31c22af4c2c44ef510a1ff1af279bf1d 84 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 40 79 0.006 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 APT61_RS07790 29495149e3c825574449403b18c54efe 378 SUPERFAMILY SSF53756 22 374 8.64E-51 T 22-04-2016 APT61_RS07790 29495149e3c825574449403b18c54efe 378 Pfam PF00534 Glycosyl transferases group 1 196 355 5.9E-25 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APT61_RS07790 29495149e3c825574449403b18c54efe 378 Gene3D G3DSA:3.40.50.2000 195 355 5.6E-20 T 22-04-2016 APT61_RS07790 29495149e3c825574449403b18c54efe 378 PANTHER PTHR12526 141 376 2.7E-36 T 22-04-2016 APT61_RS02665 da8a82d53fc468ef7e60cd86cf18d5dd 328 Pfam PF00571 CBS domain 274 325 1.5E-5 T 22-04-2016 IPR000644 CBS domain APT61_RS02665 da8a82d53fc468ef7e60cd86cf18d5dd 328 Pfam PF00571 CBS domain 208 261 8.9E-5 T 22-04-2016 IPR000644 CBS domain APT61_RS02665 da8a82d53fc468ef7e60cd86cf18d5dd 328 PIRSF PIRSF004692 1 328 4.2E-133 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APT61_RS02665 da8a82d53fc468ef7e60cd86cf18d5dd 328 PANTHER PTHR11911:SF90 180 325 1.6E-43 T 22-04-2016 APT61_RS02665 da8a82d53fc468ef7e60cd86cf18d5dd 328 Pfam PF01380 SIS domain 46 177 2.0E-33 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APT61_RS02665 da8a82d53fc468ef7e60cd86cf18d5dd 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 7.2E-126 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 APT61_RS02665 da8a82d53fc468ef7e60cd86cf18d5dd 328 SUPERFAMILY SSF53697 13 326 1.85E-67 T 22-04-2016 APT61_RS02665 da8a82d53fc468ef7e60cd86cf18d5dd 328 Gene3D G3DSA:3.10.580.10 197 325 1.8E-37 T 22-04-2016 APT61_RS02665 da8a82d53fc468ef7e60cd86cf18d5dd 328 PANTHER PTHR11911 180 325 1.6E-43 T 22-04-2016 APT61_RS02665 da8a82d53fc468ef7e60cd86cf18d5dd 328 Gene3D G3DSA:3.40.50.10490 17 196 2.7E-51 T 22-04-2016 APT61_RS16390 fbd71aafd3bc791dc393145274ebff61 192 PANTHER PTHR38098 1 173 1.2E-61 T 22-04-2016 APT61_RS16390 fbd71aafd3bc791dc393145274ebff61 192 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 4 164 25.014 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 APT61_RS16390 fbd71aafd3bc791dc393145274ebff61 192 Gene3D G3DSA:3.30.160.150 19 169 7.8E-59 T 22-04-2016 APT61_RS16390 fbd71aafd3bc791dc393145274ebff61 192 Pfam PF04390 Lipopolysaccharide-assembly 11 159 1.7E-21 T 22-04-2016 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 APT61_RS16390 fbd71aafd3bc791dc393145274ebff61 192 PANTHER PTHR38098:SF1 1 173 1.2E-61 T 22-04-2016 APT61_RS05900 e7d11f7578ace4674182970d087cbc14 212 Pfam PF06226 Protein of unknown function (DUF1007) 10 211 7.3E-65 T 22-04-2016 IPR010412 Protein of unknown function DUF1007 APT61_RS05900 e7d11f7578ace4674182970d087cbc14 212 PIRSF PIRSF008159 1 212 1.3E-70 T 22-04-2016 IPR016537 Uncharacterised conserved protein UCP008159, APT61_RS09090 602a903f8b0a286017ee4b7022657332 133 SUPERFAMILY SSF54427 5 126 8.25E-27 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS09090 602a903f8b0a286017ee4b7022657332 133 TIGRFAM TIGR02246 TIGR02246: conserved hypothetical protein 8 120 4.9E-10 T 22-04-2016 IPR011944 Steroid delta5-4-isomerase KEGG: 00140+5.3.3.1|KEGG: 00984+5.3.3.1|MetaCyc: PWY-2582|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-699|MetaCyc: PWY-7299 APT61_RS09090 602a903f8b0a286017ee4b7022657332 133 Pfam PF13474 SnoaL-like domain 8 115 3.4E-9 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain APT61_RS09090 602a903f8b0a286017ee4b7022657332 133 Gene3D G3DSA:3.10.450.50 8 118 3.9E-14 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS19895 122e47ed093550cbcd8323f17dadf1b2 150 Pfam PF04074 Domain of unknown function (DUF386) 1 147 9.2E-47 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APT61_RS19895 122e47ed093550cbcd8323f17dadf1b2 150 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 148 4.0E-59 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APT61_RS19895 122e47ed093550cbcd8323f17dadf1b2 150 SUPERFAMILY SSF51197 1 148 1.21E-44 T 22-04-2016 APT61_RS19895 122e47ed093550cbcd8323f17dadf1b2 150 Gene3D G3DSA:2.60.120.370 1 147 6.8E-51 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family APT61_RS19895 122e47ed093550cbcd8323f17dadf1b2 150 PANTHER PTHR34986 2 148 6.7E-76 T 22-04-2016 APT61_RS19895 122e47ed093550cbcd8323f17dadf1b2 150 PANTHER PTHR34986:SF1 2 148 6.7E-76 T 22-04-2016 APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 PANTHER PTHR24322:SF366 151 183 5.9E-61 T 22-04-2016 APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 PANTHER PTHR24322:SF366 12 135 5.9E-61 T 22-04-2016 APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 6.8E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 6.8E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 6.8E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.8E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.8E-37 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 PANTHER PTHR24322 151 183 5.9E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 PANTHER PTHR24322 12 135 5.9E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 1.0E-4 T 22-04-2016 APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 5.6E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 5.6E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 SUPERFAMILY SSF51735 7 246 6.12E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 246 6.0E-61 T 22-04-2016 APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS11225 db569e32200d98495e8e135db84cb4f4 249 Gene3D G3DSA:3.40.50.720 3 246 3.5E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10375 0031be12ecd7dbbee4c27505c753d42b 114 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 105 2.8E-21 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS10375 0031be12ecd7dbbee4c27505c753d42b 114 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 43 90 5.7E-19 T 22-04-2016 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS10375 0031be12ecd7dbbee4c27505c753d42b 114 Gene3D G3DSA:1.20.1290.10 3 111 4.0E-36 T 22-04-2016 IPR029032 AhpD-like APT61_RS10375 0031be12ecd7dbbee4c27505c753d42b 114 PANTHER PTHR33930:SF2 1 109 1.5E-29 T 22-04-2016 APT61_RS10375 0031be12ecd7dbbee4c27505c753d42b 114 SUPERFAMILY SSF69118 5 111 4.84E-30 T 22-04-2016 IPR029032 AhpD-like APT61_RS10375 0031be12ecd7dbbee4c27505c753d42b 114 PANTHER PTHR33930 1 109 1.5E-29 T 22-04-2016 APT61_RS17670 9899eebe8b7eefcf154e1cc60511ca05 209 PANTHER PTHR26402:SF612 2 201 4.0E-115 T 22-04-2016 APT61_RS17670 9899eebe8b7eefcf154e1cc60511ca05 209 SUPERFAMILY SSF46894 134 206 5.44E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS17670 9899eebe8b7eefcf154e1cc60511ca05 209 Pfam PF00072 Response regulator receiver domain 4 116 1.7E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS17670 9899eebe8b7eefcf154e1cc60511ca05 209 SUPERFAMILY SSF52172 1 118 2.7E-29 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS17670 9899eebe8b7eefcf154e1cc60511ca05 209 PANTHER PTHR26402 2 201 4.0E-115 T 22-04-2016 APT61_RS17670 9899eebe8b7eefcf154e1cc60511ca05 209 Gene3D G3DSA:1.10.10.10 146 205 3.9E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17670 9899eebe8b7eefcf154e1cc60511ca05 209 Gene3D G3DSA:3.40.50.2300 1 145 1.4E-33 T 22-04-2016 APT61_RS17670 9899eebe8b7eefcf154e1cc60511ca05 209 SMART SM00421 143 200 3.6E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS17670 9899eebe8b7eefcf154e1cc60511ca05 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS17670 9899eebe8b7eefcf154e1cc60511ca05 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 1.5E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS17670 9899eebe8b7eefcf154e1cc60511ca05 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 1.5E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS17670 9899eebe8b7eefcf154e1cc60511ca05 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 1.5E-12 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS17670 9899eebe8b7eefcf154e1cc60511ca05 209 SMART SM00448 2 115 5.1E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS17670 9899eebe8b7eefcf154e1cc60511ca05 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 4.2E-20 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 Gene3D G3DSA:1.10.150.200 339 456 8.2E-8 T 22-04-2016 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 Gene3D G3DSA:1.10.10.470 530 639 3.0E-29 T 22-04-2016 IPR013797 Maltooligosyl trehalose synthase, N-terminal MetaCyc: PWY-2661 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 Gene3D G3DSA:3.20.20.80 240 313 4.9E-71 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 Gene3D G3DSA:3.20.20.80 490 529 4.9E-71 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 Gene3D G3DSA:3.20.20.80 3 95 4.9E-71 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 Gene3D G3DSA:3.20.20.80 646 770 4.9E-71 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 3 835 7.1E-297 T 22-04-2016 IPR012767 Malto-oligosyltrehalose synthase MetaCyc: PWY-2661 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 PANTHER PTHR10357:SF166 192 347 3.4E-143 T 22-04-2016 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 PANTHER PTHR10357:SF166 642 770 3.4E-143 T 22-04-2016 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 PANTHER PTHR10357:SF166 1 123 3.4E-143 T 22-04-2016 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 Gene3D G3DSA:3.30.1590.10 96 224 3.4E-38 T 22-04-2016 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 PANTHER PTHR10357 192 347 3.4E-143 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 PANTHER PTHR10357 642 770 3.4E-143 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 PANTHER PTHR10357 1 123 3.4E-143 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 Pfam PF00128 Alpha amylase, catalytic domain 25 111 2.6E-18 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 SUPERFAMILY SSF51445 3 413 1.57E-125 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 SUPERFAMILY SSF51445 440 737 1.57E-125 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS11250 5f6f811c1ec63aca3454d334bfdecfc1 838 SMART SM00642 11 444 1.6E-7 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS16400 12e1c1f164b4387b535a9bbf0fd5bd28 217 Gene3D G3DSA:3.40.50.620 6 215 1.1E-65 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS16400 12e1c1f164b4387b535a9bbf0fd5bd28 217 PANTHER PTHR12039 1 217 2.8E-61 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APT61_RS16400 12e1c1f164b4387b535a9bbf0fd5bd28 217 SUPERFAMILY SSF52374 4 212 1.9E-56 T 22-04-2016 APT61_RS16400 12e1c1f164b4387b535a9bbf0fd5bd28 217 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 212 8.9E-60 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APT61_RS16400 12e1c1f164b4387b535a9bbf0fd5bd28 217 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 68 1.2E-11 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APT61_RS16400 12e1c1f164b4387b535a9bbf0fd5bd28 217 Pfam PF01467 Cytidylyltransferase-like 7 187 1.4E-34 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 APT61_RS16400 12e1c1f164b4387b535a9bbf0fd5bd28 217 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 213 29.572 T 22-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 APT61_RS09660 462a721a5ba73f2398e01c3b99bbe06b 546 PANTHER PTHR30290:SF28 18 546 0.0 T 22-04-2016 APT61_RS09660 462a721a5ba73f2398e01c3b99bbe06b 546 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 456 1.1E-83 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS09660 462a721a5ba73f2398e01c3b99bbe06b 546 PANTHER PTHR30290 18 546 0.0 T 22-04-2016 APT61_RS09660 462a721a5ba73f2398e01c3b99bbe06b 546 Gene3D G3DSA:3.10.105.10 292 507 1.1E-55 T 22-04-2016 APT61_RS09660 462a721a5ba73f2398e01c3b99bbe06b 546 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 83 105 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site APT61_RS09660 462a721a5ba73f2398e01c3b99bbe06b 546 Gene3D G3DSA:3.90.76.10 43 222 4.6E-44 T 22-04-2016 APT61_RS09660 462a721a5ba73f2398e01c3b99bbe06b 546 PIRSF PIRSF002741 1 542 3.1E-91 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APT61_RS09660 462a721a5ba73f2398e01c3b99bbe06b 546 SUPERFAMILY SSF53850 35 536 4.16E-133 T 22-04-2016 APT61_RS09790 bdd8edb7d96c9376381476e9851fb088 289 SMART SM00530 12 83 5.3E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS09790 bdd8edb7d96c9376381476e9851fb088 289 SUPERFAMILY SSF47413 2 78 6.82E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS09790 bdd8edb7d96c9376381476e9851fb088 289 PANTHER PTHR35010:SF2 4 285 1.2E-88 T 22-04-2016 APT61_RS09790 bdd8edb7d96c9376381476e9851fb088 289 Pfam PF13560 Helix-turn-helix domain 9 86 4.0E-19 T 22-04-2016 APT61_RS09790 bdd8edb7d96c9376381476e9851fb088 289 Gene3D G3DSA:1.10.260.40 6 79 2.2E-16 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS09790 bdd8edb7d96c9376381476e9851fb088 289 PANTHER PTHR35010 4 285 1.2E-88 T 22-04-2016 APT61_RS20685 3889552848e9284e9a3cffbffd4ae3a9 251 Gene3D G3DSA:3.40.50.300 3 246 7.4E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20685 3889552848e9284e9a3cffbffd4ae3a9 251 PIRSF PIRSF037116 1 251 5.6E-139 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK APT61_RS20685 3889552848e9284e9a3cffbffd4ae3a9 251 SUPERFAMILY SSF52540 2 247 1.78E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20685 3889552848e9284e9a3cffbffd4ae3a9 251 PANTHER PTHR24220 6 251 1.4E-144 T 22-04-2016 APT61_RS20685 3889552848e9284e9a3cffbffd4ae3a9 251 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 2 249 2.1E-121 T 22-04-2016 IPR012700 Phosphonate C-P lyase system, PhnK APT61_RS20685 3889552848e9284e9a3cffbffd4ae3a9 251 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS20685 3889552848e9284e9a3cffbffd4ae3a9 251 PANTHER PTHR24220:SF554 6 251 1.4E-144 T 22-04-2016 APT61_RS20685 3889552848e9284e9a3cffbffd4ae3a9 251 Pfam PF00005 ABC transporter 21 172 1.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS20685 3889552848e9284e9a3cffbffd4ae3a9 251 SMART SM00382 29 222 2.9E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS13675 471147ad667c64a3dcbd8e1d92d7df53 165 PANTHER PTHR38107 1 163 1.7E-48 T 22-04-2016 APT61_RS13675 471147ad667c64a3dcbd8e1d92d7df53 165 SUPERFAMILY SSF53955 5 160 1.38E-53 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS13675 471147ad667c64a3dcbd8e1d92d7df53 165 Gene3D G3DSA:1.10.530.40 31 160 4.6E-52 T 22-04-2016 IPR023347 Lysozyme domain GO:0003796 APT61_RS13675 471147ad667c64a3dcbd8e1d92d7df53 165 PANTHER PTHR38107:SF2 1 163 1.7E-48 T 22-04-2016 APT61_RS13675 471147ad667c64a3dcbd8e1d92d7df53 165 Pfam PF00959 Phage lysozyme 45 151 3.0E-24 T 22-04-2016 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 APT61_RS21010 3e3deeb25adc1f135c1018507d44fccf 449 PIRSF PIRSF000726 2 449 3.1E-151 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS21010 3e3deeb25adc1f135c1018507d44fccf 449 Pfam PF00696 Amino acid kinase family 4 277 1.8E-47 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS21010 3e3deeb25adc1f135c1018507d44fccf 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 4 449 1.3E-144 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS21010 3e3deeb25adc1f135c1018507d44fccf 449 SUPERFAMILY SSF53633 5 291 2.75E-75 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS21010 3e3deeb25adc1f135c1018507d44fccf 449 PANTHER PTHR21499 2 449 7.6E-143 T 22-04-2016 APT61_RS21010 3e3deeb25adc1f135c1018507d44fccf 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 4 449 2.3E-133 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS21010 3e3deeb25adc1f135c1018507d44fccf 449 SUPERFAMILY SSF55021 297 393 9.73E-16 T 22-04-2016 APT61_RS21010 3e3deeb25adc1f135c1018507d44fccf 449 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 APT61_RS21010 3e3deeb25adc1f135c1018507d44fccf 449 SUPERFAMILY SSF55021 372 448 2.23E-13 T 22-04-2016 APT61_RS21010 3e3deeb25adc1f135c1018507d44fccf 449 PANTHER PTHR21499:SF3 2 449 7.6E-143 T 22-04-2016 APT61_RS21010 3e3deeb25adc1f135c1018507d44fccf 449 Gene3D G3DSA:3.40.1160.10 106 294 5.6E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS21010 3e3deeb25adc1f135c1018507d44fccf 449 Gene3D G3DSA:3.40.1160.10 3 53 5.6E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 APT61_RS06020 2a3ebe6837c29ff48094ef35b0bc0dbe 424 SUPERFAMILY SSF55681 5 318 8.36E-104 T 22-04-2016 APT61_RS06020 2a3ebe6837c29ff48094ef35b0bc0dbe 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 6.5E-155 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APT61_RS06020 2a3ebe6837c29ff48094ef35b0bc0dbe 424 PANTHER PTHR11476 2 424 5.8E-237 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APT61_RS06020 2a3ebe6837c29ff48094ef35b0bc0dbe 424 SUPERFAMILY SSF52954 329 423 4.09E-24 T 22-04-2016 IPR004154 Anticodon-binding APT61_RS06020 2a3ebe6837c29ff48094ef35b0bc0dbe 424 Gene3D G3DSA:3.40.50.800 328 422 3.1E-31 T 22-04-2016 IPR004154 Anticodon-binding APT61_RS06020 2a3ebe6837c29ff48094ef35b0bc0dbe 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 7.8E-48 T 22-04-2016 APT61_RS06020 2a3ebe6837c29ff48094ef35b0bc0dbe 424 PANTHER PTHR11476:SF9 2 424 5.8E-237 T 22-04-2016 APT61_RS06020 2a3ebe6837c29ff48094ef35b0bc0dbe 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.329 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 APT61_RS06020 2a3ebe6837c29ff48094ef35b0bc0dbe 424 Pfam PF03129 Anticodon binding domain 341 419 1.6E-10 T 22-04-2016 IPR004154 Anticodon-binding APT61_RS06020 2a3ebe6837c29ff48094ef35b0bc0dbe 424 Gene3D G3DSA:3.30.930.10 4 185 1.2E-97 T 22-04-2016 APT61_RS06020 2a3ebe6837c29ff48094ef35b0bc0dbe 424 Gene3D G3DSA:3.30.930.10 221 320 1.2E-97 T 22-04-2016 APT61_RS06020 2a3ebe6837c29ff48094ef35b0bc0dbe 424 PIRSF PIRSF001549 2 423 4.5E-129 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 APT61_RS16835 460b7210e51fda6d6a2899227d104591 714 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 66 712 3.6E-127 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APT61_RS16835 460b7210e51fda6d6a2899227d104591 714 PANTHER PTHR32552:SF17 55 714 2.8E-174 T 22-04-2016 APT61_RS16835 460b7210e51fda6d6a2899227d104591 714 PANTHER PTHR32552:SF17 6 33 2.8E-174 T 22-04-2016 APT61_RS16835 460b7210e51fda6d6a2899227d104591 714 Gene3D G3DSA:2.170.130.10 43 172 7.0E-34 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS16835 460b7210e51fda6d6a2899227d104591 714 Pfam PF00593 TonB dependent receptor 473 713 2.2E-29 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS16835 460b7210e51fda6d6a2899227d104591 714 PANTHER PTHR32552 55 714 2.8E-174 T 22-04-2016 APT61_RS16835 460b7210e51fda6d6a2899227d104591 714 PANTHER PTHR32552 6 33 2.8E-174 T 22-04-2016 APT61_RS16835 460b7210e51fda6d6a2899227d104591 714 SUPERFAMILY SSF56935 21 714 7.14E-133 T 22-04-2016 APT61_RS16835 460b7210e51fda6d6a2899227d104591 714 Pfam PF07715 TonB-dependent Receptor Plug Domain 65 164 8.1E-21 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS16835 460b7210e51fda6d6a2899227d104591 714 Gene3D G3DSA:2.40.170.20 179 714 3.8E-148 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS09210 1fd5c408ce3a55165f92a9634f4774c2 284 Gene3D G3DSA:3.20.20.70 18 281 4.3E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS09210 1fd5c408ce3a55165f92a9634f4774c2 284 SUPERFAMILY SSF51569 3 277 7.05E-103 T 22-04-2016 APT61_RS09210 1fd5c408ce3a55165f92a9634f4774c2 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.262 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APT61_RS09210 1fd5c408ce3a55165f92a9634f4774c2 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 4.1E-117 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APT61_RS09210 1fd5c408ce3a55165f92a9634f4774c2 284 Pfam PF00793 DAHP synthetase I family 10 274 2.9E-66 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APT61_RS09210 1fd5c408ce3a55165f92a9634f4774c2 284 PANTHER PTHR21057 1 284 6.7E-228 T 22-04-2016 APT61_RS09210 1fd5c408ce3a55165f92a9634f4774c2 284 PANTHER PTHR21057:SF6 1 284 6.7E-228 T 22-04-2016 APT61_RS04600 a0c2367eee39c5132154be8caaf671af 446 Pfam PF13378 Enolase C-terminal domain-like 189 405 5.1E-37 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS04600 a0c2367eee39c5132154be8caaf671af 446 PANTHER PTHR13794 173 431 0.0 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APT61_RS04600 a0c2367eee39c5132154be8caaf671af 446 SMART SM00922 185 285 2.1E-17 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APT61_RS04600 a0c2367eee39c5132154be8caaf671af 446 PANTHER PTHR13794 7 152 0.0 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APT61_RS04600 a0c2367eee39c5132154be8caaf671af 446 SUPERFAMILY SSF51604 139 414 4.04E-82 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS04600 a0c2367eee39c5132154be8caaf671af 446 PANTHER PTHR13794:SF47 7 152 0.0 T 22-04-2016 APT61_RS04600 a0c2367eee39c5132154be8caaf671af 446 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 6 446 4.7E-268 T 22-04-2016 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499|UniPathway: UPA00564 APT61_RS04600 a0c2367eee39c5132154be8caaf671af 446 Gene3D G3DSA:3.30.390.10 11 118 6.6E-8 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS04600 a0c2367eee39c5132154be8caaf671af 446 Gene3D G3DSA:3.20.20.120 119 398 1.0E-101 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS04600 a0c2367eee39c5132154be8caaf671af 446 SUPERFAMILY SSF54826 8 137 1.54E-29 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS04600 a0c2367eee39c5132154be8caaf671af 446 PANTHER PTHR13794:SF47 173 431 0.0 T 22-04-2016 APT61_RS03170 025f87b4b607584863d8607d85abe3bf 389 SUPERFAMILY SSF46565 197 289 6.88E-6 T 22-04-2016 IPR001623 DnaJ domain APT61_RS03170 025f87b4b607584863d8607d85abe3bf 389 Gene3D G3DSA:1.10.287.110 248 288 3.6E-4 T 22-04-2016 IPR001623 DnaJ domain APT61_RS14985 2cc1938a264c57419f75895793514106 586 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 9.9E-167 T 22-04-2016 IPR003776 YcaO-like domain APT61_RS14985 2cc1938a264c57419f75895793514106 586 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 9.0E-82 T 22-04-2016 IPR003776 YcaO-like domain APT61_RS17485 25ea6ca3540479cb2100256fdb74cdce 193 PANTHER PTHR38764:SF1 2 193 2.8E-91 T 22-04-2016 APT61_RS17485 25ea6ca3540479cb2100256fdb74cdce 193 Pfam PF04336 Protein of unknown function, DUF479 81 185 6.8E-30 T 22-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 APT61_RS17485 25ea6ca3540479cb2100256fdb74cdce 193 PIRSF PIRSF011489 1 193 3.8E-83 T 22-04-2016 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 APT61_RS17485 25ea6ca3540479cb2100256fdb74cdce 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 53.646 T 22-04-2016 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 APT61_RS17485 25ea6ca3540479cb2100256fdb74cdce 193 PANTHER PTHR38764 2 193 2.8E-91 T 22-04-2016 APT61_RS02805 11e3be50239cfe113db5d1b526c46c65 150 PANTHER PTHR33867 1 150 1.3E-57 T 22-04-2016 APT61_RS02805 11e3be50239cfe113db5d1b526c46c65 150 SUPERFAMILY SSF75420 3 81 2.88E-24 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal APT61_RS02805 11e3be50239cfe113db5d1b526c46c65 150 Pfam PF02576 Putative ribosome maturation factor RimP 11 146 2.8E-47 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 APT61_RS02805 11e3be50239cfe113db5d1b526c46c65 150 SUPERFAMILY SSF74942 83 150 2.09E-16 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal APT61_RS02805 11e3be50239cfe113db5d1b526c46c65 150 PANTHER PTHR33867:SF1 1 150 1.3E-57 T 22-04-2016 APT61_RS02805 11e3be50239cfe113db5d1b526c46c65 150 Gene3D G3DSA:3.30.300.70 2 79 1.4E-32 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal APT61_RS02805 11e3be50239cfe113db5d1b526c46c65 150 Gene3D G3DSA:2.30.30.180 87 147 5.9E-12 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal APT61_RS02805 11e3be50239cfe113db5d1b526c46c65 150 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 150 23.473 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 APT61_RS18355 b28ea452a0fcbea4468871d699fe1ed3 809 SMART SM00847 388 491 3.0E-13 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 APT61_RS18355 b28ea452a0fcbea4468871d699fe1ed3 809 SMART SM00487 5 186 2.3E-19 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain APT61_RS18355 b28ea452a0fcbea4468871d699fe1ed3 809 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 808 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type APT61_RS18355 b28ea452a0fcbea4468871d699fe1ed3 809 Gene3D G3DSA:3.40.50.300 192 339 2.5E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18355 b28ea452a0fcbea4468871d699fe1ed3 809 SMART SM00490 226 328 3.9E-13 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS18355 b28ea452a0fcbea4468871d699fe1ed3 809 Pfam PF08482 ATP-dependent helicase C-terminal 664 796 1.4E-52 T 22-04-2016 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal APT61_RS18355 b28ea452a0fcbea4468871d699fe1ed3 809 Gene3D G3DSA:3.40.50.300 4 160 4.1E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18355 b28ea452a0fcbea4468871d699fe1ed3 809 Pfam PF00271 Helicase conserved C-terminal domain 205 327 4.0E-11 T 22-04-2016 IPR001650 Helicase, C-terminal APT61_RS18355 b28ea452a0fcbea4468871d699fe1ed3 809 PIRSF PIRSF005496 1 809 0.0 T 22-04-2016 IPR010225 RNA helicase, ATP-dependent DEAH box, HrpB-type APT61_RS18355 b28ea452a0fcbea4468871d699fe1ed3 809 Pfam PF00270 DEAD/DEAH box helicase 21 164 3.1E-9 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 APT61_RS18355 b28ea452a0fcbea4468871d699fe1ed3 809 PANTHER PTHR18934 4 424 2.4E-148 T 22-04-2016 APT61_RS18355 b28ea452a0fcbea4468871d699fe1ed3 809 Pfam PF04408 Helicase associated domain (HA2) 389 469 6.3E-11 T 22-04-2016 IPR007502 Helicase-associated domain GO:0004386 APT61_RS18355 b28ea452a0fcbea4468871d699fe1ed3 809 SUPERFAMILY SSF52540 14 428 2.25E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS09800 09adf95725c2233b7ffa9952b5af94e9 163 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 7 157 2.9E-54 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 APT61_RS09800 09adf95725c2233b7ffa9952b5af94e9 163 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 158 2.2E-50 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 APT61_RS09800 09adf95725c2233b7ffa9952b5af94e9 163 PANTHER PTHR35850:SF2 1 163 6.8E-72 T 22-04-2016 APT61_RS09800 09adf95725c2233b7ffa9952b5af94e9 163 PIRSF PIRSF028301 1 163 5.0E-53 T 22-04-2016 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 APT61_RS09800 09adf95725c2233b7ffa9952b5af94e9 163 PANTHER PTHR35850 1 163 6.8E-72 T 22-04-2016 APT61_RS12390 8279127ff899fdccd5564bf6c65b1ace 125 Pfam PF16931 Putative phage holin 1 118 4.3E-25 T 22-04-2016 IPR032637 Putative phage holin-like APT61_RS14885 2f0fe3acb0bdd98cf5a47adb2a9aa5a1 182 SUPERFAMILY SSF55166 68 182 1.81E-32 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APT61_RS14885 2f0fe3acb0bdd98cf5a47adb2a9aa5a1 182 PANTHER PTHR37425 1 182 8.5E-79 T 22-04-2016 APT61_RS14885 2f0fe3acb0bdd98cf5a47adb2a9aa5a1 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 7.7E-62 T 22-04-2016 IPR010275 Protein of unknown function DUF882 APT61_RS14885 2f0fe3acb0bdd98cf5a47adb2a9aa5a1 182 Gene3D G3DSA:3.30.1380.10 67 182 1.4E-29 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APT61_RS12620 661fd6cdc1ecb2205bf98f63b146c5be 453 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 289 452 1.0E-48 T 22-04-2016 IPR000160 GGDEF domain APT61_RS12620 661fd6cdc1ecb2205bf98f63b146c5be 453 SMART SM00267 279 452 8.7E-59 T 22-04-2016 IPR000160 GGDEF domain APT61_RS12620 661fd6cdc1ecb2205bf98f63b146c5be 453 PANTHER PTHR10799 106 241 1.3E-31 T 22-04-2016 APT61_RS12620 661fd6cdc1ecb2205bf98f63b146c5be 453 PANTHER PTHR10799 322 449 1.3E-31 T 22-04-2016 APT61_RS12620 661fd6cdc1ecb2205bf98f63b146c5be 453 Gene3D G3DSA:3.30.70.270 292 452 7.2E-52 T 22-04-2016 APT61_RS12620 661fd6cdc1ecb2205bf98f63b146c5be 453 Pfam PF00990 Diguanylate cyclase, GGDEF domain 291 448 5.6E-49 T 22-04-2016 IPR000160 GGDEF domain APT61_RS12620 661fd6cdc1ecb2205bf98f63b146c5be 453 SUPERFAMILY SSF55073 295 452 4.16E-46 T 22-04-2016 IPR029787 Nucleotide cyclase APT61_RS12620 661fd6cdc1ecb2205bf98f63b146c5be 453 Pfam PF17158 Membrane-associated sensor, integral membrane domain 40 276 1.4E-78 T 22-04-2016 IPR033424 Membrane-associated sensor domain APT61_RS12620 661fd6cdc1ecb2205bf98f63b146c5be 453 PANTHER PTHR10799:SF750 106 241 1.3E-31 T 22-04-2016 APT61_RS12620 661fd6cdc1ecb2205bf98f63b146c5be 453 PANTHER PTHR10799:SF750 322 449 1.3E-31 T 22-04-2016 APT61_RS12515 0cd4d9710c44bd0ceb9826130f19bff6 409 Pfam PF00589 Phage integrase family 203 390 2.9E-17 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS12515 0cd4d9710c44bd0ceb9826130f19bff6 409 Gene3D G3DSA:1.10.150.130 80 188 3.2E-4 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APT61_RS12515 0cd4d9710c44bd0ceb9826130f19bff6 409 PANTHER PTHR30349:SF36 11 408 4.3E-111 T 22-04-2016 APT61_RS12515 0cd4d9710c44bd0ceb9826130f19bff6 409 Pfam PF12167 Domain of unknown function (DUF3596) 3 67 1.1E-23 T 22-04-2016 IPR022000 Domain of unknown function (DUF3596) APT61_RS12515 0cd4d9710c44bd0ceb9826130f19bff6 409 SUPERFAMILY SSF56349 80 400 9.18E-50 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APT61_RS12515 0cd4d9710c44bd0ceb9826130f19bff6 409 PANTHER PTHR30349 11 408 4.3E-111 T 22-04-2016 APT61_RS12515 0cd4d9710c44bd0ceb9826130f19bff6 409 Gene3D G3DSA:1.10.443.10 198 401 2.6E-36 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS05905 ec4b40354c2e70f4b828d8b3f2e07e9b 321 PANTHER PTHR40659 1 321 3.1E-77 T 22-04-2016 APT61_RS05905 ec4b40354c2e70f4b828d8b3f2e07e9b 321 Pfam PF03824 High-affinity nickel-transport protein 184 312 1.6E-17 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 APT61_RS05905 ec4b40354c2e70f4b828d8b3f2e07e9b 321 Pfam PF03824 High-affinity nickel-transport protein 68 174 1.3E-21 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 APT61_RS20390 036370086db8d54cda68b7702c55fcc3 181 PANTHER PTHR11046:SF1 3 181 1.2E-126 T 22-04-2016 APT61_RS20390 036370086db8d54cda68b7702c55fcc3 181 PANTHER PTHR11046 3 181 1.2E-126 T 22-04-2016 APT61_RS20390 036370086db8d54cda68b7702c55fcc3 181 SMART SM00479 7 180 1.6E-20 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APT61_RS20390 036370086db8d54cda68b7702c55fcc3 181 Pfam PF00929 Exonuclease 9 170 1.2E-37 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III APT61_RS20390 036370086db8d54cda68b7702c55fcc3 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 44.929 T 22-04-2016 IPR022894 Oligoribonuclease GO:0016788 APT61_RS20390 036370086db8d54cda68b7702c55fcc3 181 Gene3D G3DSA:3.30.420.10 4 180 7.4E-72 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS20390 036370086db8d54cda68b7702c55fcc3 181 SUPERFAMILY SSF53098 3 180 2.18E-49 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS01555 ae36fdb29b55fe8fab9e73e53dcdace3 295 Gene3D G3DSA:1.10.3720.10 62 291 2.0E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS01555 ae36fdb29b55fe8fab9e73e53dcdace3 295 PANTHER PTHR32243 5 293 2.5E-111 T 22-04-2016 APT61_RS01555 ae36fdb29b55fe8fab9e73e53dcdace3 295 PANTHER PTHR32243:SF13 5 293 2.5E-111 T 22-04-2016 APT61_RS01555 ae36fdb29b55fe8fab9e73e53dcdace3 295 SUPERFAMILY SSF161098 56 282 1.24E-49 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS01555 ae36fdb29b55fe8fab9e73e53dcdace3 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 293 2.4E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS11915 470de0c80337899925890046e530df7b 255 SUPERFAMILY SSF56925 116 254 3.37E-23 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS11915 470de0c80337899925890046e530df7b 255 Pfam PF01298 Transferrin binding protein-like solute binding protein 115 253 5.0E-14 T 22-04-2016 IPR001677 Solute-binding protein, transferrin-binding protein-like GO:0016020 APT61_RS19940 dffbb2490052dfb2469f4d898579553b 472 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 1.3E-217 T 22-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 APT61_RS19940 dffbb2490052dfb2469f4d898579553b 472 Pfam PF02378 Phosphotransferase system, EIIC 112 404 9.6E-32 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS19940 dffbb2490052dfb2469f4d898579553b 472 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS19940 dffbb2490052dfb2469f4d898579553b 472 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 4.8E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS19940 dffbb2490052dfb2469f4d898579553b 472 Gene3D G3DSA:3.30.1360.60 6 83 1.2E-23 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS19940 dffbb2490052dfb2469f4d898579553b 472 PANTHER PTHR30175 1 466 1.1E-261 T 22-04-2016 APT61_RS19940 dffbb2490052dfb2469f4d898579553b 472 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.6E-13 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS19940 dffbb2490052dfb2469f4d898579553b 472 SUPERFAMILY SSF55604 10 81 4.58E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS19940 dffbb2490052dfb2469f4d898579553b 472 PANTHER PTHR30175:SF4 1 466 1.1E-261 T 22-04-2016 APT61_RS02360 c9ea9500a91adc98b7eb94a4874294c3 483 Pfam PF00474 Sodium:solute symporter family 36 432 1.9E-138 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS02360 c9ea9500a91adc98b7eb94a4874294c3 483 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APT61_RS02360 c9ea9500a91adc98b7eb94a4874294c3 483 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 22-04-2016 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 APT61_RS02360 c9ea9500a91adc98b7eb94a4874294c3 483 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 471 1.3E-228 T 22-04-2016 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 APT61_RS02360 c9ea9500a91adc98b7eb94a4874294c3 483 PANTHER PTHR11819:SF125 2 471 8.6E-289 T 22-04-2016 APT61_RS02360 c9ea9500a91adc98b7eb94a4874294c3 483 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 1.2E-112 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS02360 c9ea9500a91adc98b7eb94a4874294c3 483 PANTHER PTHR11819 2 471 8.6E-289 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS18365 4cee8b716ec091870985e835ecfdf475 234 Pfam PF03749 Sugar fermentation stimulation protein 13 225 2.5E-76 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein APT61_RS18365 4cee8b716ec091870985e835ecfdf475 234 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 57.886 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein APT61_RS18365 4cee8b716ec091870985e835ecfdf475 234 PANTHER PTHR30545:SF2 1 232 5.9E-91 T 22-04-2016 APT61_RS18365 4cee8b716ec091870985e835ecfdf475 234 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 2 233 4.1E-88 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein APT61_RS18365 4cee8b716ec091870985e835ecfdf475 234 PANTHER PTHR30545 1 232 5.9E-91 T 22-04-2016 APT61_RS18615 73c01dceea80a9389f3b58cc3f538f43 417 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 46 413 41.743 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 APT61_RS18615 73c01dceea80a9389f3b58cc3f538f43 417 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 362 386 - T 22-04-2016 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 APT61_RS18615 73c01dceea80a9389f3b58cc3f538f43 417 Pfam PF01098 Cell cycle protein 51 405 2.8E-127 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APT61_RS18615 73c01dceea80a9389f3b58cc3f538f43 417 PANTHER PTHR30474:SF2 27 417 3.0E-188 T 22-04-2016 APT61_RS18615 73c01dceea80a9389f3b58cc3f538f43 417 PANTHER PTHR30474 27 417 3.0E-188 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 APT61_RS18615 73c01dceea80a9389f3b58cc3f538f43 417 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 48 403 1.3E-133 T 22-04-2016 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 APT61_RS01090 19db950f0d2c6584083669e394a46d12 175 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 7.6E-32 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 APT61_RS01090 19db950f0d2c6584083669e394a46d12 175 PANTHER PTHR33162:SF4 2 174 5.5E-68 T 22-04-2016 APT61_RS01090 19db950f0d2c6584083669e394a46d12 175 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.6E-33 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APT61_RS01090 19db950f0d2c6584083669e394a46d12 175 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.6E-33 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APT61_RS01090 19db950f0d2c6584083669e394a46d12 175 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.6E-33 T 22-04-2016 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 APT61_RS01090 19db950f0d2c6584083669e394a46d12 175 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 157 19.115 T 22-04-2016 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 APT61_RS01090 19db950f0d2c6584083669e394a46d12 175 PANTHER PTHR33162 2 174 5.5E-68 T 22-04-2016 APT61_RS07015 e6f67307d28c3ccd6e349dfef8d4b080 890 Gene3D G3DSA:1.20.120.160 776 889 7.6E-33 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APT61_RS07015 e6f67307d28c3ccd6e349dfef8d4b080 890 Gene3D G3DSA:3.30.565.10 525 682 1.3E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07015 e6f67307d28c3ccd6e349dfef8d4b080 890 Pfam PF01627 Hpt domain 811 870 2.1E-10 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APT61_RS07015 e6f67307d28c3ccd6e349dfef8d4b080 890 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 15 890 24.42 T 22-04-2016 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 APT61_RS07015 e6f67307d28c3ccd6e349dfef8d4b080 890 SUPERFAMILY SSF55874 512 677 3.61E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07015 e6f67307d28c3ccd6e349dfef8d4b080 890 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 566 677 3.9E-11 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07015 e6f67307d28c3ccd6e349dfef8d4b080 890 Pfam PF16359 RcsD-ABL domain 688 789 2.4E-39 T 22-04-2016 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain APT61_RS07015 e6f67307d28c3ccd6e349dfef8d4b080 890 PANTHER PTHR26402 145 272 1.4E-86 T 22-04-2016 APT61_RS07015 e6f67307d28c3ccd6e349dfef8d4b080 890 PANTHER PTHR26402 94 110 1.4E-86 T 22-04-2016 APT61_RS07015 e6f67307d28c3ccd6e349dfef8d4b080 890 PANTHER PTHR26402:SF603 145 272 1.4E-86 T 22-04-2016 APT61_RS07015 e6f67307d28c3ccd6e349dfef8d4b080 890 PANTHER PTHR26402:SF603 94 110 1.4E-86 T 22-04-2016 APT61_RS07015 e6f67307d28c3ccd6e349dfef8d4b080 890 SMART SM00387 566 679 3.4E-5 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07015 e6f67307d28c3ccd6e349dfef8d4b080 890 SUPERFAMILY SSF47226 805 889 4.97E-21 T 22-04-2016 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 APT61_RS14130 fd2eabfba7497a584333c420f4c46559 402 PANTHER PTHR23517:SF2 1 392 1.3E-181 T 22-04-2016 APT61_RS14130 fd2eabfba7497a584333c420f4c46559 402 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 41.049 T 22-04-2016 IPR022855 Multidrug resistance protein MdtH APT61_RS14130 fd2eabfba7497a584333c420f4c46559 402 SUPERFAMILY SSF103473 12 393 6.02E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS14130 fd2eabfba7497a584333c420f4c46559 402 Gene3D G3DSA:1.20.1250.20 206 386 4.0E-19 T 22-04-2016 APT61_RS14130 fd2eabfba7497a584333c420f4c46559 402 Gene3D G3DSA:1.20.1250.20 19 186 5.6E-26 T 22-04-2016 APT61_RS14130 fd2eabfba7497a584333c420f4c46559 402 Pfam PF07690 Major Facilitator Superfamily 20 239 3.7E-22 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS14130 fd2eabfba7497a584333c420f4c46559 402 PANTHER PTHR23517 1 392 1.3E-181 T 22-04-2016 APT61_RS12180 e05216816332b5c515b6533cd3162383 309 Gene3D G3DSA:3.50.14.10 7 212 3.3E-79 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 APT61_RS12180 e05216816332b5c515b6533cd3162383 309 Gene3D G3DSA:3.50.14.10 235 281 1.9E-13 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 APT61_RS12180 e05216816332b5c515b6533cd3162383 309 SUPERFAMILY SSF56596 6 308 1.27E-118 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 APT61_RS12180 e05216816332b5c515b6533cd3162383 309 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 55.499 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 APT61_RS12180 e05216816332b5c515b6533cd3162383 309 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 9.8E-149 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 APT61_RS12180 e05216816332b5c515b6533cd3162383 309 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 2.5E-134 T 22-04-2016 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 APT61_RS16590 0f4a262fdec0b170d5fc961badd427ca 701 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 596 3.2E-35 T 22-04-2016 IPR025299 CstA, C-terminal domain APT61_RS16590 0f4a262fdec0b170d5fc961badd427ca 701 PANTHER PTHR30252:SF2 5 696 0.0 T 22-04-2016 APT61_RS16590 0f4a262fdec0b170d5fc961badd427ca 701 Pfam PF02554 Carbon starvation protein CstA 32 403 6.9E-169 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 APT61_RS16590 0f4a262fdec0b170d5fc961badd427ca 701 PANTHER PTHR30252 5 696 0.0 T 22-04-2016 APT61_RS15420 e703efd1e916215b62e29d5a1028c6fa 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 1.9E-57 T 22-04-2016 IPR000150 Cof protein GO:0016787 APT61_RS15420 e703efd1e916215b62e29d5a1028c6fa 272 Gene3D G3DSA:3.30.1240.10 84 178 5.0E-30 T 22-04-2016 APT61_RS15420 e703efd1e916215b62e29d5a1028c6fa 272 SUPERFAMILY SSF56784 1 263 7.98E-63 T 22-04-2016 IPR023214 HAD-like domain APT61_RS15420 e703efd1e916215b62e29d5a1028c6fa 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 232 2.3E-18 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APT61_RS15420 e703efd1e916215b62e29d5a1028c6fa 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 22-04-2016 APT61_RS15420 e703efd1e916215b62e29d5a1028c6fa 272 PANTHER PTHR10000:SF27 1 265 6.1E-110 T 22-04-2016 APT61_RS15420 e703efd1e916215b62e29d5a1028c6fa 272 Gene3D G3DSA:3.40.50.1000 1 74 4.3E-46 T 22-04-2016 IPR023214 HAD-like domain APT61_RS15420 e703efd1e916215b62e29d5a1028c6fa 272 Gene3D G3DSA:3.40.50.1000 179 264 4.3E-46 T 22-04-2016 IPR023214 HAD-like domain APT61_RS15420 e703efd1e916215b62e29d5a1028c6fa 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 5.1E-53 T 22-04-2016 IPR023214 HAD-like domain APT61_RS15420 e703efd1e916215b62e29d5a1028c6fa 272 PANTHER PTHR10000 1 265 6.1E-110 T 22-04-2016 APT61_RS21340 e759988dab1309fe99d58152bf0fc7ea 249 Pfam PF01261 Xylose isomerase-like TIM barrel 113 206 8.4E-7 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS21340 e759988dab1309fe99d58152bf0fc7ea 249 SUPERFAMILY SSF51658 4 248 1.18E-60 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS21340 e759988dab1309fe99d58152bf0fc7ea 249 Gene3D G3DSA:3.20.20.150 3 248 2.9E-82 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS09240 d780de49c3a02a843418cd33ef0024d1 117 Pfam PF02635 DsrE/DsrF-like family 2 117 1.5E-22 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein APT61_RS09240 d780de49c3a02a843418cd33ef0024d1 117 SUPERFAMILY SSF75169 1 117 9.03E-35 T 22-04-2016 IPR027396 DsrEFH-like APT61_RS09240 d780de49c3a02a843418cd33ef0024d1 117 PANTHER PTHR34874 2 117 2.5E-79 T 22-04-2016 APT61_RS09240 d780de49c3a02a843418cd33ef0024d1 117 PANTHER PTHR34874:SF2 2 117 2.5E-79 T 22-04-2016 APT61_RS09240 d780de49c3a02a843418cd33ef0024d1 117 Gene3D G3DSA:3.40.1260.10 1 117 4.8E-45 T 22-04-2016 IPR027396 DsrEFH-like APT61_RS02060 a4ffa77c17ca05961fee845a1b285c77 209 Gene3D G3DSA:2.40.30.10 158 207 5.8E-8 T 22-04-2016 APT61_RS02060 a4ffa77c17ca05961fee845a1b285c77 209 Gene3D G3DSA:2.40.30.10 3 32 5.8E-8 T 22-04-2016 APT61_RS02060 a4ffa77c17ca05961fee845a1b285c77 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site APT61_RS02060 a4ffa77c17ca05961fee845a1b285c77 209 PANTHER PTHR11229 1 208 7.2E-123 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02060 a4ffa77c17ca05961fee845a1b285c77 209 Gene3D G3DSA:4.10.960.10 77 157 7.3E-35 T 22-04-2016 APT61_RS02060 a4ffa77c17ca05961fee845a1b285c77 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.681 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02060 a4ffa77c17ca05961fee845a1b285c77 209 SUPERFAMILY SSF50447 1 208 2.56E-80 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APT61_RS02060 a4ffa77c17ca05961fee845a1b285c77 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 4.3E-92 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02060 a4ffa77c17ca05961fee845a1b285c77 209 Pfam PF00297 Ribosomal protein L3 45 182 4.5E-14 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS03210 ed4a01ddd3f5ac7796e7ebfd831ddfce 329 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 107 125 - T 22-04-2016 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APT61_RS03210 ed4a01ddd3f5ac7796e7ebfd831ddfce 329 SUPERFAMILY SSF48208 21 327 1.23E-85 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APT61_RS03210 ed4a01ddd3f5ac7796e7ebfd831ddfce 329 Gene3D G3DSA:1.50.10.10 25 328 4.8E-75 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APT61_RS03210 ed4a01ddd3f5ac7796e7ebfd831ddfce 329 Pfam PF01270 Glycosyl hydrolases family 8 11 328 5.3E-106 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APT61_RS03210 ed4a01ddd3f5ac7796e7ebfd831ddfce 329 PRINTS PR00735 Glycosyl hydrolase family 8 signature 236 245 1.5E-26 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APT61_RS03210 ed4a01ddd3f5ac7796e7ebfd831ddfce 329 PRINTS PR00735 Glycosyl hydrolase family 8 signature 107 125 1.5E-26 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APT61_RS03210 ed4a01ddd3f5ac7796e7ebfd831ddfce 329 PRINTS PR00735 Glycosyl hydrolase family 8 signature 171 188 1.5E-26 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APT61_RS03210 ed4a01ddd3f5ac7796e7ebfd831ddfce 329 PRINTS PR00735 Glycosyl hydrolase family 8 signature 49 62 1.5E-26 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APT61_RS03210 ed4a01ddd3f5ac7796e7ebfd831ddfce 329 PRINTS PR00735 Glycosyl hydrolase family 8 signature 316 329 1.5E-26 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APT61_RS03210 ed4a01ddd3f5ac7796e7ebfd831ddfce 329 PRINTS PR00735 Glycosyl hydrolase family 8 signature 211 222 1.5E-26 T 22-04-2016 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 APT61_RS07250 36953334d547c607be311593256d5a95 385 Pfam PF04235 Protein of unknown function (DUF418) 215 374 8.1E-47 T 22-04-2016 IPR007349 Domain of unknown function DUF418 APT61_RS07250 36953334d547c607be311593256d5a95 385 PANTHER PTHR30590 2 377 2.9E-141 T 22-04-2016 APT61_RS07250 36953334d547c607be311593256d5a95 385 PANTHER PTHR30590:SF2 2 377 2.9E-141 T 22-04-2016 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 Pfam PF00672 HAMP domain 196 263 2.5E-16 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 Gene3D G3DSA:1.10.287.950 284 488 1.4E-63 T 22-04-2016 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.7E-91 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.7E-91 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 1.7E-91 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 1.7E-91 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.7E-91 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 1.7E-91 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.7E-91 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 SMART SM00319 44 182 1.3E-67 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 SMART SM00304 216 268 1.1E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 515 7.8E-68 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 PANTHER PTHR32089:SF48 1 519 1.2E-211 T 22-04-2016 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 SUPERFAMILY SSF58104 236 521 4.84E-76 T 22-04-2016 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 SMART SM00283 269 516 1.5E-94 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 PANTHER PTHR32089 1 519 1.2E-211 T 22-04-2016 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 Gene3D G3DSA:1.20.120.30 35 181 9.9E-62 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 SUPERFAMILY SSF47170 25 183 4.71E-51 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS19295 6176f2a554c3a0f4337208c3e61c6a52 554 Pfam PF02203 Tar ligand binding domain homologue 1 176 1.3E-57 T 22-04-2016 IPR003122 Chemotaxis methyl-accepting receptor, ligand-binding GO:0004888|GO:0006935|GO:0007165|GO:0016020 APT61_RS16905 ae09005a2b8e3b329f090b7a337fcb83 413 SUPERFAMILY SSF103473 16 408 3.14E-35 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS16905 ae09005a2b8e3b329f090b7a337fcb83 413 PANTHER PTHR23522 10 406 2.5E-129 T 22-04-2016 APT61_RS16905 ae09005a2b8e3b329f090b7a337fcb83 413 PANTHER PTHR23522:SF1 10 406 2.5E-129 T 22-04-2016 APT61_RS16905 ae09005a2b8e3b329f090b7a337fcb83 413 Gene3D G3DSA:1.20.1250.20 212 406 1.1E-24 T 22-04-2016 APT61_RS16905 ae09005a2b8e3b329f090b7a337fcb83 413 Gene3D G3DSA:1.20.1250.20 22 194 9.1E-6 T 22-04-2016 APT61_RS16905 ae09005a2b8e3b329f090b7a337fcb83 413 Pfam PF03825 Nucleoside H+ symporter 21 409 4.9E-100 T 22-04-2016 APT61_RS20095 563838c8949354468a750affef896544 213 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 38.582 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APT61_RS20095 563838c8949354468a750affef896544 213 Gene3D G3DSA:3.30.1060.10 7 199 5.8E-80 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APT61_RS20095 563838c8949354468a750affef896544 213 PANTHER PTHR10173:SF6 3 201 2.8E-105 T 22-04-2016 APT61_RS20095 563838c8949354468a750affef896544 213 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 1.5E-67 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APT61_RS20095 563838c8949354468a750affef896544 213 SUPERFAMILY SSF55068 5 208 4.97E-84 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APT61_RS20095 563838c8949354468a750affef896544 213 PANTHER PTHR10173 3 201 2.8E-105 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 APT61_RS20095 563838c8949354468a750affef896544 213 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 45 199 6.3E-71 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 APT61_RS11510 5ebbd5ee191ea966ee330c012ba50ea4 406 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 229 393 1.0E-33 T 22-04-2016 IPR031475 Putative nucleotide-binding C-terminal domain APT61_RS11510 5ebbd5ee191ea966ee330c012ba50ea4 406 Pfam PF07005 Putative sugar-binding N-terminal domain 10 218 5.2E-53 T 22-04-2016 IPR010737 Putative sugar-binding, N-terminal domain APT61_RS11510 5ebbd5ee191ea966ee330c012ba50ea4 406 SUPERFAMILY SSF142764 11 400 1.44E-93 T 22-04-2016 APT61_RS11510 5ebbd5ee191ea966ee330c012ba50ea4 406 Gene3D G3DSA:3.40.250.10 314 357 4.5E-4 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS11510 5ebbd5ee191ea966ee330c012ba50ea4 406 Gene3D G3DSA:3.40.250.10 253 254 4.5E-4 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS11510 5ebbd5ee191ea966ee330c012ba50ea4 406 Gene3D G3DSA:3.40.250.10 160 192 4.5E-4 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS22090 69eec56e1783a7b528a99d6c29d22876 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.768 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APT61_RS22090 69eec56e1783a7b528a99d6c29d22876 119 SUPERFAMILY SSF54211 5 116 5.06E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold APT61_RS22090 69eec56e1783a7b528a99d6c29d22876 119 PANTHER PTHR33992 2 116 4.0E-43 T 22-04-2016 APT61_RS22090 69eec56e1783a7b528a99d6c29d22876 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 115 1.1E-37 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APT61_RS22090 69eec56e1783a7b528a99d6c29d22876 119 Pfam PF00825 Ribonuclease P 6 111 1.3E-33 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APT61_RS22090 69eec56e1783a7b528a99d6c29d22876 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 22-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 APT61_RS22090 69eec56e1783a7b528a99d6c29d22876 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 105 2.0E-44 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 APT61_RS22090 69eec56e1783a7b528a99d6c29d22876 119 Gene3D G3DSA:3.30.230.10 5 116 4.5E-35 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup APT61_RS11265 84237b812bfbfa9c1ad15f2258fd4b6e 245 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 1 245 30.72 T 22-04-2016 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 APT61_RS11265 84237b812bfbfa9c1ad15f2258fd4b6e 245 Gene3D G3DSA:3.60.21.10 3 211 1.9E-23 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS11265 84237b812bfbfa9c1ad15f2258fd4b6e 245 Pfam PF00149 Calcineurin-like phosphoesterase 2 189 1.5E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 APT61_RS11265 84237b812bfbfa9c1ad15f2258fd4b6e 245 SUPERFAMILY SSF56300 1 243 2.31E-39 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like APT61_RS16410 8f5dd132e3f0a2c4bfe03264f7383417 155 PANTHER PTHR33603:SF1 1 154 2.7E-69 T 22-04-2016 APT61_RS16410 8f5dd132e3f0a2c4bfe03264f7383417 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 27.033 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS16410 8f5dd132e3f0a2c4bfe03264f7383417 155 PIRSF PIRSF004505 1 154 1.8E-40 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS16410 8f5dd132e3f0a2c4bfe03264f7383417 155 Gene3D G3DSA:3.40.1280.10 2 154 8.2E-53 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT61_RS16410 8f5dd132e3f0a2c4bfe03264f7383417 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 155 3.1E-86 T 22-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS16410 8f5dd132e3f0a2c4bfe03264f7383417 155 PANTHER PTHR33603 1 154 2.7E-69 T 22-04-2016 APT61_RS16410 8f5dd132e3f0a2c4bfe03264f7383417 155 SUPERFAMILY SSF75217 2 153 4.13E-50 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APT61_RS16410 8f5dd132e3f0a2c4bfe03264f7383417 155 Pfam PF02590 Predicted SPOUT methyltransferase 2 153 3.6E-46 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 APT61_RS05630 52ec41d5e083156be8cbcaaea13534b6 356 Pfam PF00793 DAHP synthetase I family 37 340 2.9E-107 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 APT61_RS05630 52ec41d5e083156be8cbcaaea13534b6 356 Gene3D G3DSA:3.20.20.70 10 348 1.8E-153 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS05630 52ec41d5e083156be8cbcaaea13534b6 356 PANTHER PTHR21225 1 347 5.6E-226 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APT61_RS05630 52ec41d5e083156be8cbcaaea13534b6 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 9 350 1.5E-172 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APT61_RS05630 52ec41d5e083156be8cbcaaea13534b6 356 PIRSF PIRSF001361 1 354 6.9E-164 T 22-04-2016 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 APT61_RS05630 52ec41d5e083156be8cbcaaea13534b6 356 SUPERFAMILY SSF51569 8 345 1.05E-134 T 22-04-2016 APT61_RS17805 48f6ac8e1434f8a78c4973716a2b9cb4 500 Gene3D G3DSA:3.40.605.10 22 281 1.6E-96 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS17805 48f6ac8e1434f8a78c4973716a2b9cb4 500 Gene3D G3DSA:3.40.309.10 282 465 1.4E-63 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS17805 48f6ac8e1434f8a78c4973716a2b9cb4 500 Pfam PF00171 Aldehyde dehydrogenase family 30 490 2.9E-168 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS17805 48f6ac8e1434f8a78c4973716a2b9cb4 500 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APT61_RS17805 48f6ac8e1434f8a78c4973716a2b9cb4 500 SUPERFAMILY SSF53720 20 495 1.15E-162 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS17805 48f6ac8e1434f8a78c4973716a2b9cb4 500 PANTHER PTHR11699 1 499 8.3E-280 T 22-04-2016 APT61_RS17805 48f6ac8e1434f8a78c4973716a2b9cb4 500 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 296 307 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APT61_RS17805 48f6ac8e1434f8a78c4973716a2b9cb4 500 PANTHER PTHR11699:SF174 1 499 8.3E-280 T 22-04-2016 APT61_RS04965 f9934c7602728adf3ad65952419ba4e8 373 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 371 1.7E-169 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 APT61_RS04965 f9934c7602728adf3ad65952419ba4e8 373 PANTHER PTHR30149:SF0 2 373 8.4E-203 T 22-04-2016 APT61_RS04965 f9934c7602728adf3ad65952419ba4e8 373 PANTHER PTHR30149 2 373 8.4E-203 T 22-04-2016 APT61_RS04965 f9934c7602728adf3ad65952419ba4e8 373 Pfam PF01924 Hydrogenase formation hypA family 16 367 3.5E-152 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 APT61_RS04965 f9934c7602728adf3ad65952419ba4e8 373 PIRSF PIRSF005622 1 372 7.0E-158 T 22-04-2016 IPR002780 Hydrogenase formation HypD protein GO:0046872 APT61_RS01400 9b5df6e90f19b1557ee46b7e127b9ec0 85 Gene3D G3DSA:1.10.1200.10 2 83 5.4E-16 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS01400 9b5df6e90f19b1557ee46b7e127b9ec0 85 Pfam PF00550 Phosphopantetheine attachment site 8 62 5.3E-7 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS01400 9b5df6e90f19b1557ee46b7e127b9ec0 85 SUPERFAMILY SSF47336 2 83 2.75E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain APT61_RS09060 1373bc36b62603fdae39baf48b3fcb69 371 SMART SM00922 146 244 4.3E-19 T 22-04-2016 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal APT61_RS09060 1373bc36b62603fdae39baf48b3fcb69 371 PANTHER PTHR13794 2 370 1.2E-99 T 22-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 APT61_RS09060 1373bc36b62603fdae39baf48b3fcb69 371 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 128 2.7E-29 T 22-04-2016 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain APT61_RS09060 1373bc36b62603fdae39baf48b3fcb69 371 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 194 225 - T 22-04-2016 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 APT61_RS09060 1373bc36b62603fdae39baf48b3fcb69 371 SUPERFAMILY SSF51604 116 370 1.26E-60 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS09060 1373bc36b62603fdae39baf48b3fcb69 371 Gene3D G3DSA:3.30.390.10 2 124 3.2E-42 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS09060 1373bc36b62603fdae39baf48b3fcb69 371 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 5 371 7.4E-146 T 22-04-2016 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 APT61_RS09060 1373bc36b62603fdae39baf48b3fcb69 371 Pfam PF13378 Enolase C-terminal domain-like 154 363 1.1E-43 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS09060 1373bc36b62603fdae39baf48b3fcb69 371 SUPERFAMILY SSF54826 3 129 2.5E-32 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 APT61_RS09060 1373bc36b62603fdae39baf48b3fcb69 371 PANTHER PTHR13794:SF55 2 370 1.2E-99 T 22-04-2016 APT61_RS09060 1373bc36b62603fdae39baf48b3fcb69 371 Gene3D G3DSA:3.20.20.120 125 358 8.2E-60 T 22-04-2016 IPR029065 Enolase C-terminal domain-like APT61_RS06690 49ccd6b61a3ed1b83e7e6269f5a377ce 219 Pfam PF09335 SNARE associated Golgi protein 49 176 1.4E-25 T 22-04-2016 IPR032816 SNARE associated Golgi protein APT61_RS06690 49ccd6b61a3ed1b83e7e6269f5a377ce 219 PANTHER PTHR30353:SF0 1 219 1.4E-102 T 22-04-2016 APT61_RS06690 49ccd6b61a3ed1b83e7e6269f5a377ce 219 PANTHER PTHR30353 1 219 1.4E-102 T 22-04-2016 IPR032818 DedA family APT61_RS04105 c88cda93f66bb1b51131eff7782c19f7 109 PANTHER PTHR34981:SF1 2 109 1.5E-31 T 22-04-2016 APT61_RS04105 c88cda93f66bb1b51131eff7782c19f7 109 SUPERFAMILY SSF102829 6 94 6.67E-26 T 22-04-2016 IPR007838 Cell division protein ZapA-like APT61_RS04105 c88cda93f66bb1b51131eff7782c19f7 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 38.373 T 22-04-2016 IPR023771 Cell division protein ZapA, eubacteria APT61_RS04105 c88cda93f66bb1b51131eff7782c19f7 109 PANTHER PTHR34981 2 109 1.5E-31 T 22-04-2016 APT61_RS04105 c88cda93f66bb1b51131eff7782c19f7 109 Pfam PF05164 Cell division protein ZapA 6 90 2.4E-20 T 22-04-2016 IPR007838 Cell division protein ZapA-like APT61_RS10680 00fe60ed9711fdd8d5355ec706f8411f 314 PANTHER PTHR30193:SF5 30 308 2.2E-102 T 22-04-2016 APT61_RS10680 00fe60ed9711fdd8d5355ec706f8411f 314 SUPERFAMILY SSF161098 28 308 3.01E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10680 00fe60ed9711fdd8d5355ec706f8411f 314 PANTHER PTHR30193 30 308 2.2E-102 T 22-04-2016 APT61_RS10680 00fe60ed9711fdd8d5355ec706f8411f 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 308 2.1E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10680 00fe60ed9711fdd8d5355ec706f8411f 314 Gene3D G3DSA:1.10.3720.10 39 308 8.2E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS02990 101f980c3eca454d9be649476d1632e3 443 PANTHER PTHR35334 11 443 0.0 T 22-04-2016 APT61_RS02990 101f980c3eca454d9be649476d1632e3 443 PANTHER PTHR35334:SF4 11 443 0.0 T 22-04-2016 APT61_RS15780 d450d4e2e8329c4a9854841167631446 253 Gene3D G3DSA:3.60.10.10 3 251 5.5E-24 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APT61_RS15780 d450d4e2e8329c4a9854841167631446 253 PANTHER PTHR15822:SF7 1 251 9.1E-112 T 22-04-2016 APT61_RS15780 d450d4e2e8329c4a9854841167631446 253 SUPERFAMILY SSF56219 8 251 2.49E-53 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APT61_RS15780 d450d4e2e8329c4a9854841167631446 253 PANTHER PTHR15822 1 251 9.1E-112 T 22-04-2016 APT61_RS15780 d450d4e2e8329c4a9854841167631446 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 13 244 1.0E-22 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase APT61_RS02865 ba8ec2ece2d2b78fd713e73985767783 331 Pfam PF01136 Peptidase family U32 76 330 1.1E-67 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS02865 ba8ec2ece2d2b78fd713e73985767783 331 PANTHER PTHR30217:SF3 240 330 6.3E-226 T 22-04-2016 APT61_RS02865 ba8ec2ece2d2b78fd713e73985767783 331 PANTHER PTHR30217:SF3 1 218 6.3E-226 T 22-04-2016 APT61_RS02865 ba8ec2ece2d2b78fd713e73985767783 331 SUPERFAMILY SSF51391 11 162 5.23E-6 T 22-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 APT61_RS02865 ba8ec2ece2d2b78fd713e73985767783 331 PANTHER PTHR30217 240 330 6.3E-226 T 22-04-2016 APT61_RS02865 ba8ec2ece2d2b78fd713e73985767783 331 PANTHER PTHR30217 1 218 6.3E-226 T 22-04-2016 APT61_RS02865 ba8ec2ece2d2b78fd713e73985767783 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS06720 76a20cf53bc0e166f8e5b1eaf7263760 189 SUPERFAMILY SSF52507 2 187 1.83E-59 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APT61_RS06720 76a20cf53bc0e166f8e5b1eaf7263760 189 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 36.925 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 APT61_RS06720 76a20cf53bc0e166f8e5b1eaf7263760 189 Gene3D G3DSA:3.40.50.1950 2 188 1.9E-77 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APT61_RS06720 76a20cf53bc0e166f8e5b1eaf7263760 189 Pfam PF02441 Flavoprotein 2 127 1.2E-26 T 22-04-2016 IPR003382 Flavoprotein GO:0003824 APT61_RS06720 76a20cf53bc0e166f8e5b1eaf7263760 189 PANTHER PTHR30108:SF10 2 188 1.1E-124 T 22-04-2016 APT61_RS06720 76a20cf53bc0e166f8e5b1eaf7263760 189 PANTHER PTHR30108 2 188 1.1E-124 T 22-04-2016 APT61_RS06720 76a20cf53bc0e166f8e5b1eaf7263760 189 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 2.7E-70 T 22-04-2016 IPR004507 Flavin prenyltransferase UbiX/Pad1 APT61_RS20865 ff98c1904f370cf8cade199ba4d27840 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 176 6.0E-62 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APT61_RS20865 ff98c1904f370cf8cade199ba4d27840 176 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 39.622 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APT61_RS20865 ff98c1904f370cf8cade199ba4d27840 176 SUPERFAMILY SSF50249 4 176 1.65E-62 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS20865 ff98c1904f370cf8cade199ba4d27840 176 Pfam PF00436 Single-strand binding protein family 6 112 1.0E-41 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 APT61_RS20865 ff98c1904f370cf8cade199ba4d27840 176 PIRSF PIRSF002070 2 163 1.9E-41 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APT61_RS20865 ff98c1904f370cf8cade199ba4d27840 176 PANTHER PTHR10302 4 176 7.4E-56 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 APT61_RS20865 ff98c1904f370cf8cade199ba4d27840 176 Gene3D G3DSA:2.40.50.140 4 176 1.6E-57 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS07740 903a248a18e904679a63996d92eea687 426 PANTHER PTHR36836:SF1 1 84 6.1E-161 T 22-04-2016 APT61_RS07740 903a248a18e904679a63996d92eea687 426 PANTHER PTHR36836:SF1 104 426 6.1E-161 T 22-04-2016 APT61_RS07740 903a248a18e904679a63996d92eea687 426 PANTHER PTHR36836 1 84 6.1E-161 T 22-04-2016 APT61_RS07740 903a248a18e904679a63996d92eea687 426 PANTHER PTHR36836 104 426 6.1E-161 T 22-04-2016 APT61_RS07740 903a248a18e904679a63996d92eea687 426 TIGRFAM TIGR04006 wcaK: colanic acid biosynthesis pyruvyl transferase WcaK 1 426 6.6E-279 T 22-04-2016 IPR023918 Colanic acid biosynthesis, pyruvyl transferase, WcaK KEGG: 00231+2.-.-.-|UniPathway: UPA00936 APT61_RS07740 903a248a18e904679a63996d92eea687 426 Pfam PF04230 Polysaccharide pyruvyl transferase 13 356 5.7E-38 T 22-04-2016 IPR007345 Polysaccharide pyruvyl transferase APT61_RS01115 e236747bde785f5fcbe40e2694f240b1 233 Gene3D G3DSA:2.40.30.10 3 98 9.9E-30 T 22-04-2016 APT61_RS01115 e236747bde785f5fcbe40e2694f240b1 233 PANTHER PTHR19370:SF119 4 233 2.7E-142 T 22-04-2016 APT61_RS01115 e236747bde785f5fcbe40e2694f240b1 233 SUPERFAMILY SSF52343 100 231 1.83E-36 T 22-04-2016 APT61_RS01115 e236747bde785f5fcbe40e2694f240b1 233 SUPERFAMILY SSF63380 3 97 2.15E-21 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APT61_RS01115 e236747bde785f5fcbe40e2694f240b1 233 Gene3D G3DSA:3.40.50.80 100 231 5.0E-39 T 22-04-2016 APT61_RS01115 e236747bde785f5fcbe40e2694f240b1 233 PANTHER PTHR19370 4 233 2.7E-142 T 22-04-2016 APT61_RS01115 e236747bde785f5fcbe40e2694f240b1 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 1.2E-5 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APT61_RS01115 e236747bde785f5fcbe40e2694f240b1 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 4.0E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APT61_RS01115 e236747bde785f5fcbe40e2694f240b1 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 4.0E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APT61_RS01115 e236747bde785f5fcbe40e2694f240b1 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 4.0E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APT61_RS01115 e236747bde785f5fcbe40e2694f240b1 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 4.0E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APT61_RS01115 e236747bde785f5fcbe40e2694f240b1 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 4.0E-14 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APT61_RS01115 e236747bde785f5fcbe40e2694f240b1 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 3.3E-21 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APT61_RS16795 2875e027eb32315745a543b6b298c8e1 81 Pfam PF10820 Protein of unknown function (DUF2543) 1 81 5.4E-47 T 22-04-2016 IPR020251 Uncharacterised protein family, YmjA APT61_RS16795 2875e027eb32315745a543b6b298c8e1 81 ProDom PD059807 YMJA ECS1872 1 81 5.0E-31 T 22-04-2016 IPR020251 Uncharacterised protein family, YmjA APT61_RS12605 6361823594c0000d869d943990382986 107 SUPERFAMILY SSF141488 27 104 1.83E-22 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor APT61_RS12605 6361823594c0000d869d943990382986 107 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 33 94 1.2E-16 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor APT61_RS14035 426fcc49f0fe43d02a29a7077547a2db 404 PANTHER PTHR23501 1 399 1.6E-98 T 22-04-2016 APT61_RS14035 426fcc49f0fe43d02a29a7077547a2db 404 PANTHER PTHR23501:SF79 1 399 1.6E-98 T 22-04-2016 APT61_RS14035 426fcc49f0fe43d02a29a7077547a2db 404 Gene3D G3DSA:1.20.1250.20 13 189 1.7E-17 T 22-04-2016 APT61_RS14035 426fcc49f0fe43d02a29a7077547a2db 404 Gene3D G3DSA:1.20.1250.20 213 390 3.1E-13 T 22-04-2016 APT61_RS14035 426fcc49f0fe43d02a29a7077547a2db 404 Pfam PF07690 Major Facilitator Superfamily 18 327 5.6E-27 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS14035 426fcc49f0fe43d02a29a7077547a2db 404 SUPERFAMILY SSF103473 6 388 9.29E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS20050 878fe2869dbc5d99ab8390bcf8b52084 333 PANTHER PTHR32196 1 326 3.5E-211 T 22-04-2016 APT61_RS20050 878fe2869dbc5d99ab8390bcf8b52084 333 PANTHER PTHR32196:SF23 1 326 3.5E-211 T 22-04-2016 APT61_RS20050 878fe2869dbc5d99ab8390bcf8b52084 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 304 1.8E-41 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS03520 432015aa3f2a7abc633705b0fa2e64df 272 PANTHER PTHR30622 3 272 3.9E-148 T 22-04-2016 APT61_RS03520 432015aa3f2a7abc633705b0fa2e64df 272 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 271 18.784 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APT61_RS03520 432015aa3f2a7abc633705b0fa2e64df 272 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 264 5.2E-106 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APT61_RS03520 432015aa3f2a7abc633705b0fa2e64df 272 Pfam PF02673 Bacitracin resistance protein BacA 10 265 6.4E-83 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 APT61_RS03520 432015aa3f2a7abc633705b0fa2e64df 272 PANTHER PTHR30622:SF3 3 272 3.9E-148 T 22-04-2016 APT61_RS12675 1fbdcaf4db71284b65dffe5c3dffdcc9 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APT61_RS12675 1fbdcaf4db71284b65dffe5c3dffdcc9 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 22-04-2016 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APT61_RS12675 1fbdcaf4db71284b65dffe5c3dffdcc9 135 SUPERFAMILY SSF54593 1 130 2.01E-35 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS12675 1fbdcaf4db71284b65dffe5c3dffdcc9 135 PANTHER PTHR10374 1 125 7.5E-63 T 22-04-2016 APT61_RS12675 1fbdcaf4db71284b65dffe5c3dffdcc9 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 2.4E-68 T 22-04-2016 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|UniPathway: UPA00619 APT61_RS12675 1fbdcaf4db71284b65dffe5c3dffdcc9 135 Gene3D G3DSA:3.10.180.10 1 127 1.3E-47 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS12675 1fbdcaf4db71284b65dffe5c3dffdcc9 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 4.2E-24 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APT61_RS13400 10facc1fe7fe0b63f8a31fd9bf83175c 264 PANTHER PTHR36180 31 140 6.3E-24 T 22-04-2016 APT61_RS13400 10facc1fe7fe0b63f8a31fd9bf83175c 264 PANTHER PTHR36180:SF1 31 140 6.3E-24 T 22-04-2016 APT61_RS13400 10facc1fe7fe0b63f8a31fd9bf83175c 264 Pfam PF08346 AntA/AntB antirepressor 46 116 4.2E-22 T 22-04-2016 IPR013557 AntA/AntB antirepressor APT61_RS16975 e384bfc843f9f8675ab35f8fb4fefcc8 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 2.0E-146 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 APT61_RS16975 e384bfc843f9f8675ab35f8fb4fefcc8 461 Pfam PF09190 DALR domain 341 402 1.4E-24 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APT61_RS16975 e384bfc843f9f8675ab35f8fb4fefcc8 461 Gene3D G3DSA:3.40.50.620 20 305 1.9E-114 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS16975 e384bfc843f9f8675ab35f8fb4fefcc8 461 Gene3D G3DSA:1.20.120.640 306 392 2.9E-29 T 22-04-2016 APT61_RS16975 e384bfc843f9f8675ab35f8fb4fefcc8 461 SUPERFAMILY SSF47323 316 460 9.15E-44 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS16975 e384bfc843f9f8675ab35f8fb4fefcc8 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.713 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APT61_RS16975 e384bfc843f9f8675ab35f8fb4fefcc8 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APT61_RS16975 e384bfc843f9f8675ab35f8fb4fefcc8 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APT61_RS16975 e384bfc843f9f8675ab35f8fb4fefcc8 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APT61_RS16975 e384bfc843f9f8675ab35f8fb4fefcc8 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APT61_RS16975 e384bfc843f9f8675ab35f8fb4fefcc8 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 2.2E-198 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 APT61_RS16975 e384bfc843f9f8675ab35f8fb4fefcc8 461 SUPERFAMILY SSF52374 1 313 3.22E-105 T 22-04-2016 APT61_RS16975 e384bfc843f9f8675ab35f8fb4fefcc8 461 SMART SM00840 341 402 1.4E-27 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 APT61_RS16975 e384bfc843f9f8675ab35f8fb4fefcc8 461 PANTHER PTHR10890 1 460 4.5E-265 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 APT61_RS00040 6e45b0d844c47b1e56c7a1a0fefe0b13 483 PANTHER PTHR36846 1 483 1.3E-133 T 22-04-2016 APT61_RS00040 6e45b0d844c47b1e56c7a1a0fefe0b13 483 Hamap MF_01626 Protein ViaA [viaA]. 1 483 58.067 T 22-04-2016 IPR023481 Uncharacterised protein family ViaA APT61_RS00040 6e45b0d844c47b1e56c7a1a0fefe0b13 483 Pfam PF05762 VWA domain containing CoxE-like protein 321 458 8.0E-9 T 22-04-2016 IPR008912 Uncharacterised protein family CoxE-like APT61_RS00040 6e45b0d844c47b1e56c7a1a0fefe0b13 483 SMART SM00327 319 483 3.7E-9 T 22-04-2016 IPR002035 von Willebrand factor, type A APT61_RS00040 6e45b0d844c47b1e56c7a1a0fefe0b13 483 SUPERFAMILY SSF53300 318 459 5.38E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A APT61_RS06520 de8b95ed5acaede6d14391cd8b4988f9 238 SUPERFAMILY SSF53474 32 208 4.16E-21 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS06520 de8b95ed5acaede6d14391cd8b4988f9 238 Pfam PF00326 Prolyl oligopeptidase family 65 206 4.5E-5 T 22-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 APT61_RS06520 de8b95ed5acaede6d14391cd8b4988f9 238 Gene3D G3DSA:3.40.50.1820 29 208 6.3E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS12470 c4ddd026ff5b13a6b010130311d8f3c3 72 Gene3D G3DSA:1.10.260.40 1 71 3.1E-22 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS12470 c4ddd026ff5b13a6b010130311d8f3c3 72 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 4 66 6.3E-19 T 22-04-2016 IPR031856 Putative bacterial antitoxin YdaS APT61_RS12470 c4ddd026ff5b13a6b010130311d8f3c3 72 SUPERFAMILY SSF47413 4 63 1.64E-8 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS18720 bc3ae4a74131940f137d524e25dd755d 301 PANTHER PTHR10366:SF475 2 289 8.9E-82 T 22-04-2016 APT61_RS18720 bc3ae4a74131940f137d524e25dd755d 301 SUPERFAMILY SSF51735 1 280 1.9E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS18720 bc3ae4a74131940f137d524e25dd755d 301 Gene3D G3DSA:3.40.50.720 1 281 7.4E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS18720 bc3ae4a74131940f137d524e25dd755d 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 210 4.0E-14 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APT61_RS18720 bc3ae4a74131940f137d524e25dd755d 301 PANTHER PTHR10366 2 289 8.9E-82 T 22-04-2016 APT61_RS02880 3e1f70c287176fc73c0574aefc92deaf 99 PANTHER PTHR34477:SF1 2 98 7.5E-42 T 22-04-2016 APT61_RS02880 3e1f70c287176fc73c0574aefc92deaf 99 SUPERFAMILY SSF82771 3 71 3.14E-11 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APT61_RS02880 3e1f70c287176fc73c0574aefc92deaf 99 Pfam PF01541 GIY-YIG catalytic domain 2 74 4.1E-13 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APT61_RS02880 3e1f70c287176fc73c0574aefc92deaf 99 PANTHER PTHR34477 2 98 7.5E-42 T 22-04-2016 APT61_RS01320 8785c0e9c3af075cb695466a0e52c502 217 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 14 204 1.4E-34 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial APT61_RS01320 8785c0e9c3af075cb695466a0e52c502 217 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 13 195 1.2E-25 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 APT61_RS01320 8785c0e9c3af075cb695466a0e52c502 217 SUPERFAMILY SSF56784 15 210 7.13E-20 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01320 8785c0e9c3af075cb695466a0e52c502 217 Pfam PF12710 haloacid dehalogenase-like hydrolase 15 193 2.1E-25 T 22-04-2016 APT61_RS01320 8785c0e9c3af075cb695466a0e52c502 217 Gene3D G3DSA:3.40.50.1000 83 204 1.3E-23 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01585 b4c0b4fda26979d72ccbe02b6dea677b 162 Gene3D G3DSA:3.40.630.30 2 161 4.1E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS01585 b4c0b4fda26979d72ccbe02b6dea677b 162 PANTHER PTHR23091:SF262 1 161 1.4E-69 T 22-04-2016 APT61_RS01585 b4c0b4fda26979d72ccbe02b6dea677b 162 PANTHER PTHR23091 1 161 1.4E-69 T 22-04-2016 APT61_RS01585 b4c0b4fda26979d72ccbe02b6dea677b 162 Pfam PF00583 Acetyltransferase (GNAT) family 56 137 8.4E-17 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS01585 b4c0b4fda26979d72ccbe02b6dea677b 162 SUPERFAMILY SSF55729 4 161 1.24E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS18605 10c6d7dc1e1e264f5d36e78b2918d7cd 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 3.7E-183 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS18605 10c6d7dc1e1e264f5d36e78b2918d7cd 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.322 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 APT61_RS18605 10c6d7dc1e1e264f5d36e78b2918d7cd 491 PANTHER PTHR23135:SF5 14 469 1.5E-228 T 22-04-2016 APT61_RS18605 10c6d7dc1e1e264f5d36e78b2918d7cd 491 Gene3D G3DSA:3.40.50.720 20 107 1.7E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS18605 10c6d7dc1e1e264f5d36e78b2918d7cd 491 Pfam PF08245 Mur ligase middle domain 124 304 2.1E-28 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18605 10c6d7dc1e1e264f5d36e78b2918d7cd 491 PANTHER PTHR23135 14 469 1.5E-228 T 22-04-2016 APT61_RS18605 10c6d7dc1e1e264f5d36e78b2918d7cd 491 Pfam PF01225 Mur ligase family, catalytic domain 21 118 2.1E-29 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18605 10c6d7dc1e1e264f5d36e78b2918d7cd 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 417 2.1E-19 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS18605 10c6d7dc1e1e264f5d36e78b2918d7cd 491 SUPERFAMILY SSF53244 323 476 5.13E-44 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS18605 10c6d7dc1e1e264f5d36e78b2918d7cd 491 SUPERFAMILY SSF51984 20 106 2.49E-29 T 22-04-2016 APT61_RS18605 10c6d7dc1e1e264f5d36e78b2918d7cd 491 Gene3D G3DSA:3.40.1190.10 108 325 5.6E-86 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS18605 10c6d7dc1e1e264f5d36e78b2918d7cd 491 Gene3D G3DSA:3.90.190.20 326 477 9.0E-54 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 APT61_RS18605 10c6d7dc1e1e264f5d36e78b2918d7cd 491 SUPERFAMILY SSF53623 105 322 9.81E-75 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 APT61_RS00535 bf065b298fc02150dab51ff42341214a 79 Pfam PF06005 Protein of unknown function (DUF904) 1 78 2.2E-27 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 APT61_RS00535 bf065b298fc02150dab51ff42341214a 79 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 18.376 T 22-04-2016 IPR009252 Cell division protein ZapB GO:0000917|GO:0005737|GO:0043093 APT61_RS00785 d691e5fe714687fd61536b81992c5753 89 Pfam PF13710 ACT domain 13 73 3.4E-28 T 22-04-2016 APT61_RS00785 d691e5fe714687fd61536b81992c5753 89 Gene3D G3DSA:3.30.70.260 1 74 4.8E-14 T 22-04-2016 APT61_RS00785 d691e5fe714687fd61536b81992c5753 89 SUPERFAMILY SSF55021 3 74 1.04E-12 T 22-04-2016 APT61_RS06900 e6d1f465aa54796b91a143e5f5678fa6 305 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 40.373 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 APT61_RS06900 e6d1f465aa54796b91a143e5f5678fa6 305 Pfam PF12706 Beta-lactamase superfamily domain 202 270 1.9E-7 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS06900 e6d1f465aa54796b91a143e5f5678fa6 305 Pfam PF12706 Beta-lactamase superfamily domain 37 155 3.5E-11 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS06900 e6d1f465aa54796b91a143e5f5678fa6 305 Gene3D G3DSA:3.60.15.10 1 157 9.3E-87 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS06900 e6d1f465aa54796b91a143e5f5678fa6 305 Gene3D G3DSA:3.60.15.10 196 305 9.3E-87 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS06900 e6d1f465aa54796b91a143e5f5678fa6 305 PANTHER PTHR12553 1 152 1.2E-95 T 22-04-2016 APT61_RS06900 e6d1f465aa54796b91a143e5f5678fa6 305 PANTHER PTHR12553 183 276 1.2E-95 T 22-04-2016 APT61_RS06900 e6d1f465aa54796b91a143e5f5678fa6 305 SUPERFAMILY SSF56281 1 304 8.86E-88 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS06900 e6d1f465aa54796b91a143e5f5678fa6 305 SMART SM00849 18 202 0.0017 T 22-04-2016 IPR001279 Metallo-beta-lactamase APT61_RS06900 e6d1f465aa54796b91a143e5f5678fa6 305 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 304 3.5E-106 T 22-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 APT61_RS21465 cfa0aa3952a5662766b7cb3834069e21 246 Pfam PF06629 MltA-interacting protein MipA 26 246 7.2E-46 T 22-04-2016 IPR010583 MltA-interacting MipA APT61_RS21465 cfa0aa3952a5662766b7cb3834069e21 246 PANTHER PTHR38776 3 246 2.2E-67 T 22-04-2016 APT61_RS04520 29864f9b1ae32244cb19a6b0277211d4 75 PANTHER PTHR37011:SF2 1 75 2.6E-41 T 22-04-2016 APT61_RS04520 29864f9b1ae32244cb19a6b0277211d4 75 SUPERFAMILY SSF50182 23 73 1.31E-19 T 22-04-2016 IPR010920 LSM domain APT61_RS04520 29864f9b1ae32244cb19a6b0277211d4 75 PANTHER PTHR37011 1 75 2.6E-41 T 22-04-2016 APT61_RS04520 29864f9b1ae32244cb19a6b0277211d4 75 Gene3D G3DSA:2.30.30.100 20 75 1.0E-32 T 22-04-2016 APT61_RS04520 29864f9b1ae32244cb19a6b0277211d4 75 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 72 1.6E-25 T 22-04-2016 IPR010305 Protein of unknown function DUF903 APT61_RS06750 30f82a33a7fc85dc7f1762d08f2155e3 169 SUPERFAMILY SSF55729 2 164 4.58E-39 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS06750 30f82a33a7fc85dc7f1762d08f2155e3 169 PANTHER PTHR13256 3 164 1.7E-34 T 22-04-2016 APT61_RS06750 30f82a33a7fc85dc7f1762d08f2155e3 169 Gene3D G3DSA:3.40.630.30 3 164 2.0E-40 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS06750 30f82a33a7fc85dc7f1762d08f2155e3 169 PANTHER PTHR13256:SF10 3 164 1.7E-34 T 22-04-2016 APT61_RS06750 30f82a33a7fc85dc7f1762d08f2155e3 169 Pfam PF13302 Acetyltransferase (GNAT) domain 8 140 2.2E-27 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS04400 7f9056f32dd1732c6fad3f65ee9b9c17 346 PANTHER PTHR11732 1 139 7.2E-212 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS04400 7f9056f32dd1732c6fad3f65ee9b9c17 346 PANTHER PTHR11732 157 346 7.2E-212 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS04400 7f9056f32dd1732c6fad3f65ee9b9c17 346 Pfam PF00248 Aldo/keto reductase family 16 337 7.8E-72 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS04400 7f9056f32dd1732c6fad3f65ee9b9c17 346 PRINTS PR00069 Aldo-keto reductase signature 164 181 2.2E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS04400 7f9056f32dd1732c6fad3f65ee9b9c17 346 PRINTS PR00069 Aldo-keto reductase signature 116 134 2.2E-8 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS04400 7f9056f32dd1732c6fad3f65ee9b9c17 346 Gene3D G3DSA:3.20.20.100 1 343 4.3E-105 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS04400 7f9056f32dd1732c6fad3f65ee9b9c17 346 SUPERFAMILY SSF51430 1 344 3.67E-105 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS04400 7f9056f32dd1732c6fad3f65ee9b9c17 346 PANTHER PTHR11732:SF112 1 139 7.2E-212 T 22-04-2016 APT61_RS04400 7f9056f32dd1732c6fad3f65ee9b9c17 346 PANTHER PTHR11732:SF112 157 346 7.2E-212 T 22-04-2016 APT61_RS01475 4ef7c6cca8251ae80ce8bb39fd56e15b 93 PANTHER PTHR38775:SF1 2 93 3.2E-25 T 22-04-2016 APT61_RS01475 4ef7c6cca8251ae80ce8bb39fd56e15b 93 PANTHER PTHR38775 2 93 3.2E-25 T 22-04-2016 APT61_RS01475 4ef7c6cca8251ae80ce8bb39fd56e15b 93 Pfam PF06611 Protein of unknown function (DUF1145) 3 60 1.8E-23 T 22-04-2016 IPR009525 Protein of unknown function DUF1145 APT61_RS00135 940c43f9ff98955a80ff1a8113814255 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 45.563 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 APT61_RS00135 940c43f9ff98955a80ff1a8113814255 328 PANTHER PTHR39573:SF1 2 328 1.0E-183 T 22-04-2016 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 APT61_RS00135 940c43f9ff98955a80ff1a8113814255 328 Gene3D G3DSA:3.90.1200.10 106 325 2.4E-45 T 22-04-2016 APT61_RS00135 940c43f9ff98955a80ff1a8113814255 328 SUPERFAMILY SSF56112 6 327 1.31E-89 T 22-04-2016 IPR011009 Protein kinase-like domain APT61_RS00135 940c43f9ff98955a80ff1a8113814255 328 PANTHER PTHR39573 2 328 1.0E-183 T 22-04-2016 APT61_RS00135 940c43f9ff98955a80ff1a8113814255 328 Pfam PF01636 Phosphotransferase enzyme family 32 256 9.8E-41 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase APT61_RS01755 e6603742ee68e98d2a1300a5039d45c7 133 SMART SM00363 9 72 5.1E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS01755 e6603742ee68e98d2a1300a5039d45c7 133 PIRSF PIRSF016821 6 133 1.8E-40 T 22-04-2016 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 APT61_RS01755 e6603742ee68e98d2a1300a5039d45c7 133 Pfam PF01479 S4 domain 9 53 6.4E-13 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS01755 e6603742ee68e98d2a1300a5039d45c7 133 PANTHER PTHR11079:SF70 1 109 1.5E-31 T 22-04-2016 APT61_RS01755 e6603742ee68e98d2a1300a5039d45c7 133 PANTHER PTHR11079 1 109 1.5E-31 T 22-04-2016 APT61_RS01755 e6603742ee68e98d2a1300a5039d45c7 133 SUPERFAMILY SSF55174 9 104 1.03E-30 T 22-04-2016 APT61_RS01755 e6603742ee68e98d2a1300a5039d45c7 133 Gene3D G3DSA:3.10.290.10 8 103 3.9E-39 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 APT61_RS09180 67b991dbb98a12fa0ee3bbcfcf1f6c1e 203 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 2 202 28.658 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 APT61_RS09180 67b991dbb98a12fa0ee3bbcfcf1f6c1e 203 Pfam PF03550 Outer membrane lipoprotein LolB 46 200 4.1E-48 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 APT61_RS09180 67b991dbb98a12fa0ee3bbcfcf1f6c1e 203 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 3 202 2.8E-85 T 22-04-2016 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 APT61_RS09180 67b991dbb98a12fa0ee3bbcfcf1f6c1e 203 PANTHER PTHR30634 1 203 3.8E-64 T 22-04-2016 APT61_RS09180 67b991dbb98a12fa0ee3bbcfcf1f6c1e 203 Gene3D G3DSA:2.50.20.10 10 202 4.2E-68 T 22-04-2016 APT61_RS09180 67b991dbb98a12fa0ee3bbcfcf1f6c1e 203 SUPERFAMILY SSF89392 17 202 1.53E-53 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX APT61_RS09180 67b991dbb98a12fa0ee3bbcfcf1f6c1e 203 PANTHER PTHR30634:SF11 1 203 3.8E-64 T 22-04-2016 APT61_RS00420 aef8a4d94cbec1493d33620cd7c93097 328 TIGRFAM TIGR02637 RhaS: rhamnose ABC transporter, rhamnose-binding protein 26 326 3.0E-135 T 22-04-2016 IPR013459 Rhamnose-binding protein GO:0015762 APT61_RS00420 aef8a4d94cbec1493d33620cd7c93097 328 Gene3D G3DSA:3.40.50.2300 150 280 3.2E-33 T 22-04-2016 APT61_RS00420 aef8a4d94cbec1493d33620cd7c93097 328 Gene3D G3DSA:3.40.50.2300 23 149 3.9E-32 T 22-04-2016 APT61_RS00420 aef8a4d94cbec1493d33620cd7c93097 328 SUPERFAMILY SSF53822 23 324 5.1E-68 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS00420 aef8a4d94cbec1493d33620cd7c93097 328 Pfam PF13407 Periplasmic binding protein domain 26 285 1.3E-59 T 22-04-2016 IPR025997 Periplasmic binding protein APT61_RS00420 aef8a4d94cbec1493d33620cd7c93097 328 PANTHER PTHR32196 23 289 2.3E-85 T 22-04-2016 APT61_RS00420 aef8a4d94cbec1493d33620cd7c93097 328 PANTHER PTHR32196:SF1 23 289 2.3E-85 T 22-04-2016 IPR030159 Autoinducer 2-binding protein LsrB/rhamnose-binding protein RhaS GO:0043190 APT61_RS03460 2d55968fa0443c5de72706955b98f09f 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 1.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS03460 2d55968fa0443c5de72706955b98f09f 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 1.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS03460 2d55968fa0443c5de72706955b98f09f 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 1.0E-9 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS03460 2d55968fa0443c5de72706955b98f09f 215 Gene3D G3DSA:3.40.50.2300 2 126 5.0E-18 T 22-04-2016 APT61_RS03460 2d55968fa0443c5de72706955b98f09f 215 PANTHER PTHR26402 3 209 1.0E-31 T 22-04-2016 APT61_RS03460 2d55968fa0443c5de72706955b98f09f 215 Gene3D G3DSA:1.10.10.10 127 211 3.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS03460 2d55968fa0443c5de72706955b98f09f 215 SMART SM00448 3 122 2.4E-4 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS03460 2d55968fa0443c5de72706955b98f09f 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.8E-17 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS03460 2d55968fa0443c5de72706955b98f09f 215 SMART SM00421 148 205 2.2E-18 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS03460 2d55968fa0443c5de72706955b98f09f 215 SUPERFAMILY SSF46894 147 211 2.82E-17 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS03460 2d55968fa0443c5de72706955b98f09f 215 SUPERFAMILY SSF52172 2 138 2.28E-15 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS03460 2d55968fa0443c5de72706955b98f09f 215 Pfam PF00072 Response regulator receiver domain 6 122 6.4E-10 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS03460 2d55968fa0443c5de72706955b98f09f 215 PANTHER PTHR26402:SF458 3 209 1.0E-31 T 22-04-2016 APT61_RS17740 ca3087f39175b94fb4d8e127c1badf01 328 PRINTS PR00069 Aldo-keto reductase signature 146 163 5.4E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS17740 ca3087f39175b94fb4d8e127c1badf01 328 PRINTS PR00069 Aldo-keto reductase signature 39 63 5.4E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS17740 ca3087f39175b94fb4d8e127c1badf01 328 PANTHER PTHR11732 1 317 1.7E-121 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS17740 ca3087f39175b94fb4d8e127c1badf01 328 Pfam PF00248 Aldo/keto reductase family 15 315 2.5E-76 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS17740 ca3087f39175b94fb4d8e127c1badf01 328 Gene3D G3DSA:3.20.20.100 1 316 5.1E-99 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS17740 ca3087f39175b94fb4d8e127c1badf01 328 SUPERFAMILY SSF51430 1 317 1.31E-97 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS19245 91863be586be3f4d5c78ac69c9f09212 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 135 149 2.4E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19245 91863be586be3f4d5c78ac69c9f09212 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 177 2.4E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19245 91863be586be3f4d5c78ac69c9f09212 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 165 2.4E-6 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19245 91863be586be3f4d5c78ac69c9f09212 211 SUPERFAMILY SSF46894 127 189 2.75E-14 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS19245 91863be586be3f4d5c78ac69c9f09212 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 187 4.6E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19245 91863be586be3f4d5c78ac69c9f09212 211 SMART SM00421 132 189 3.3E-14 T 22-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 APT61_RS19245 91863be586be3f4d5c78ac69c9f09212 211 Gene3D G3DSA:1.10.10.10 135 189 1.1E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15875 6c4ba427bc1ff07e9ff9d2d7aac55f60 561 Pfam PF01175 Urocanase 11 546 6.6E-264 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 APT61_RS15875 6c4ba427bc1ff07e9ff9d2d7aac55f60 561 TIGRFAM TIGR01228 hutU: urocanate hydratase 9 553 2.8E-304 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 APT61_RS15875 6c4ba427bc1ff07e9ff9d2d7aac55f60 561 SUPERFAMILY SSF111326 7 554 2.09E-262 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 APT61_RS15875 6c4ba427bc1ff07e9ff9d2d7aac55f60 561 Hamap MF_00577 Urocanate hydratase [hutU]. 3 555 50.283 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 APT61_RS15875 6c4ba427bc1ff07e9ff9d2d7aac55f60 561 ProSitePatterns PS01233 Urocanase signature. 441 456 - T 22-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 APT61_RS15875 6c4ba427bc1ff07e9ff9d2d7aac55f60 561 PIRSF PIRSF001423 2 560 9.3E-297 T 22-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 APT61_RS15875 6c4ba427bc1ff07e9ff9d2d7aac55f60 561 Gene3D G3DSA:3.40.1770.10 7 140 9.4E-165 T 22-04-2016 APT61_RS15875 6c4ba427bc1ff07e9ff9d2d7aac55f60 561 Gene3D G3DSA:3.40.1770.10 359 554 9.4E-165 T 22-04-2016 APT61_RS15875 6c4ba427bc1ff07e9ff9d2d7aac55f60 561 PANTHER PTHR12216 8 554 0.0 T 22-04-2016 APT61_RS15875 6c4ba427bc1ff07e9ff9d2d7aac55f60 561 Gene3D G3DSA:3.40.50.10730 141 348 4.8E-96 T 22-04-2016 APT61_RS15875 6c4ba427bc1ff07e9ff9d2d7aac55f60 561 PANTHER PTHR12216:SF3 8 554 0.0 T 22-04-2016 APT61_RS02500 d98235ebf739fe27aa620368573615c5 374 SUPERFAMILY SSF52540 67 208 4.82E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS02500 d98235ebf739fe27aa620368573615c5 374 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 374 53.177 T 22-04-2016 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 APT61_RS02500 d98235ebf739fe27aa620368573615c5 374 PANTHER PTHR12169:SF11 1 374 2.4E-203 T 22-04-2016 APT61_RS02500 d98235ebf739fe27aa620368573615c5 374 PANTHER PTHR12169 1 374 2.4E-203 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 APT61_RS02500 d98235ebf739fe27aa620368573615c5 374 Pfam PF03969 AFG1-like ATPase 5 371 4.4E-161 T 22-04-2016 IPR005654 ATPase, AFG1-like GO:0005524 APT61_RS02500 d98235ebf739fe27aa620368573615c5 374 Gene3D G3DSA:3.40.50.300 2 184 4.4E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11010 71fabb51fc57d0ca8a034c6e18064a1a 463 SUPERFAMILY SSF103473 14 459 3.79E-37 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11010 71fabb51fc57d0ca8a034c6e18064a1a 463 PANTHER PTHR23515:SF1 394 459 1.8E-260 T 22-04-2016 APT61_RS11010 71fabb51fc57d0ca8a034c6e18064a1a 463 PANTHER PTHR23515:SF1 13 374 1.8E-260 T 22-04-2016 APT61_RS11010 71fabb51fc57d0ca8a034c6e18064a1a 463 Pfam PF07690 Major Facilitator Superfamily 43 419 2.3E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS11010 71fabb51fc57d0ca8a034c6e18064a1a 463 TIGRFAM TIGR00886 2A0108: nitrite transporter 34 415 1.4E-103 T 22-04-2016 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 APT61_RS11010 71fabb51fc57d0ca8a034c6e18064a1a 463 Gene3D G3DSA:1.20.1250.20 33 232 1.2E-13 T 22-04-2016 APT61_RS11010 71fabb51fc57d0ca8a034c6e18064a1a 463 Gene3D G3DSA:1.20.1250.20 253 456 1.2E-9 T 22-04-2016 APT61_RS11010 71fabb51fc57d0ca8a034c6e18064a1a 463 PANTHER PTHR23515 394 459 1.8E-260 T 22-04-2016 APT61_RS11010 71fabb51fc57d0ca8a034c6e18064a1a 463 PANTHER PTHR23515 13 374 1.8E-260 T 22-04-2016 APT61_RS03470 599813e39f2e02f4aadfe53f5fcf0678 223 Pfam PF01730 UreF 37 180 9.1E-32 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 APT61_RS03470 599813e39f2e02f4aadfe53f5fcf0678 223 Hamap MF_01385 Urease accessory protein UreF [ureF]. 5 223 28.779 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 APT61_RS03470 599813e39f2e02f4aadfe53f5fcf0678 223 PIRSF PIRSF009467 2 223 1.7E-64 T 22-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 APT61_RS03470 599813e39f2e02f4aadfe53f5fcf0678 223 PANTHER PTHR33620 1 223 4.6E-25 T 22-04-2016 APT61_RS09540 c2ff0847b20bc329fd709874d45a7037 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS09540 c2ff0847b20bc329fd709874d45a7037 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 198 2.1E-4 T 22-04-2016 APT61_RS09540 c2ff0847b20bc329fd709874d45a7037 253 Pfam PF00106 short chain dehydrogenase 14 208 1.2E-53 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09540 c2ff0847b20bc329fd709874d45a7037 253 PANTHER PTHR24322:SF337 165 196 8.2E-102 T 22-04-2016 APT61_RS09540 c2ff0847b20bc329fd709874d45a7037 253 PANTHER PTHR24322:SF337 17 149 8.2E-102 T 22-04-2016 APT61_RS09540 c2ff0847b20bc329fd709874d45a7037 253 Gene3D G3DSA:3.40.50.720 7 247 9.6E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS09540 c2ff0847b20bc329fd709874d45a7037 253 PANTHER PTHR24322 165 196 8.2E-102 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09540 c2ff0847b20bc329fd709874d45a7037 253 PANTHER PTHR24322 17 149 8.2E-102 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09540 c2ff0847b20bc329fd709874d45a7037 253 SUPERFAMILY SSF51735 10 244 1.87E-67 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS09540 c2ff0847b20bc329fd709874d45a7037 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.4E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09540 c2ff0847b20bc329fd709874d45a7037 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 3.4E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09540 c2ff0847b20bc329fd709874d45a7037 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 3.4E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09540 c2ff0847b20bc329fd709874d45a7037 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 3.4E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS09540 c2ff0847b20bc329fd709874d45a7037 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 3.4E-21 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS16705 d933e963eb42597cfebb4869e0bc9472 317 Gene3D G3DSA:1.10.10.10 14 61 1.4E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS16705 d933e963eb42597cfebb4869e0bc9472 317 PANTHER PTHR34294 6 316 3.2E-78 T 22-04-2016 APT61_RS16705 d933e963eb42597cfebb4869e0bc9472 317 Pfam PF01047 MarR family 14 51 8.1E-6 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS16705 d933e963eb42597cfebb4869e0bc9472 317 SUPERFAMILY SSF46785 13 65 4.77E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS16705 d933e963eb42597cfebb4869e0bc9472 317 SUPERFAMILY SSF100950 63 314 3.22E-67 T 22-04-2016 APT61_RS16705 d933e963eb42597cfebb4869e0bc9472 317 Gene3D G3DSA:3.40.50.1360 62 315 1.0E-76 T 22-04-2016 APT61_RS16705 d933e963eb42597cfebb4869e0bc9472 317 Pfam PF04198 Putative sugar-binding domain 63 315 1.6E-64 T 22-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 APT61_RS01260 1e0a0ffc87f069b1e840185c4cc24afa 134 SUPERFAMILY SSF141571 49 126 2.75E-7 T 22-04-2016 APT61_RS11940 5ade52782a1dea56eb4be1559b7ef921 436 PANTHER PTHR22935 98 434 6.8E-60 T 22-04-2016 APT61_RS11940 5ade52782a1dea56eb4be1559b7ef921 436 SUPERFAMILY SSF56601 62 414 2.67E-77 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS11940 5ade52782a1dea56eb4be1559b7ef921 436 Gene3D G3DSA:3.40.710.10 106 407 5.6E-48 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS11940 5ade52782a1dea56eb4be1559b7ef921 436 Pfam PF00144 Beta-lactamase 116 415 4.8E-42 T 22-04-2016 IPR001466 Beta-lactamase-related APT61_RS11940 5ade52782a1dea56eb4be1559b7ef921 436 PANTHER PTHR22935:SF2 98 434 6.8E-60 T 22-04-2016 APT61_RS18910 ca3a253a1946ae09941df757af439e0c 176 Pfam PF02525 Flavodoxin-like fold 2 167 3.5E-40 T 22-04-2016 IPR003680 Flavodoxin-like fold APT61_RS18910 ca3a253a1946ae09941df757af439e0c 176 Hamap MF_01414 Glutathione-regulated potassium-efflux system ancillary protein KefF [kefF]. 1 173 54.462 T 22-04-2016 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 APT61_RS18910 ca3a253a1946ae09941df757af439e0c 176 SUPERFAMILY SSF52218 2 172 9.54E-48 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS18910 ca3a253a1946ae09941df757af439e0c 176 Gene3D G3DSA:3.40.50.360 2 172 5.2E-48 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS18910 ca3a253a1946ae09941df757af439e0c 176 PANTHER PTHR10204:SF41 1 172 8.6E-124 T 22-04-2016 APT61_RS18910 ca3a253a1946ae09941df757af439e0c 176 PANTHER PTHR10204 1 172 8.6E-124 T 22-04-2016 APT61_RS03750 f6fc01123bffe369f6b5e093f83d373b 298 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 190 218 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS03750 f6fc01123bffe369f6b5e093f83d373b 298 SUPERFAMILY SSF51735 52 297 5.67E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS03750 f6fc01123bffe369f6b5e093f83d373b 298 PANTHER PTHR24322 203 235 2.1E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS03750 f6fc01123bffe369f6b5e093f83d373b 298 PANTHER PTHR24322 58 187 2.1E-57 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS03750 f6fc01123bffe369f6b5e093f83d373b 298 PANTHER PTHR24322:SF564 203 235 2.1E-57 T 22-04-2016 APT61_RS03750 f6fc01123bffe369f6b5e093f83d373b 298 PANTHER PTHR24322:SF564 58 187 2.1E-57 T 22-04-2016 APT61_RS03750 f6fc01123bffe369f6b5e093f83d373b 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 193 1.6E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS03750 f6fc01123bffe369f6b5e093f83d373b 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 259 279 1.6E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS03750 f6fc01123bffe369f6b5e093f83d373b 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 55 72 1.6E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS03750 f6fc01123bffe369f6b5e093f83d373b 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 222 1.6E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS03750 f6fc01123bffe369f6b5e093f83d373b 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 142 1.6E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS03750 f6fc01123bffe369f6b5e093f83d373b 298 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 241 1.6E-31 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS03750 f6fc01123bffe369f6b5e093f83d373b 298 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 63 295 3.3E-56 T 22-04-2016 APT61_RS03750 f6fc01123bffe369f6b5e093f83d373b 298 Gene3D G3DSA:3.40.50.720 49 296 1.5E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS03365 73af97958f1ae9582aff6b43bbe83192 192 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 115 3.0E-40 T 22-04-2016 IPR006531 Gp5 N-terminal APT61_RS03365 73af97958f1ae9582aff6b43bbe83192 192 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 190 3.0E-64 T 22-04-2016 IPR013046 Phage baseplate assembly protein V/Gp45 APT61_RS08445 b798d3e5297ec0e3b2dfdad6067cbba8 794 PANTHER PTHR30451:SF5 28 794 5.3E-196 T 22-04-2016 APT61_RS08445 b798d3e5297ec0e3b2dfdad6067cbba8 794 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 278 288 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site APT61_RS08445 b798d3e5297ec0e3b2dfdad6067cbba8 794 Pfam PF13953 PapC C-terminal domain 717 775 4.5E-7 T 22-04-2016 IPR025949 PapC-like, C-terminal domain APT61_RS08445 b798d3e5297ec0e3b2dfdad6067cbba8 794 PANTHER PTHR30451 28 794 5.3E-196 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APT61_RS08445 b798d3e5297ec0e3b2dfdad6067cbba8 794 Pfam PF00577 Outer membrane usher protein 227 697 5.3E-35 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APT61_RS04250 f0cd38e2dfc29b222f6b4333cb82942d 409 Pfam PF03222 Tryptophan/tyrosine permease family 16 376 5.0E-8 T 22-04-2016 IPR018227 Tryptophan/tyrosine permease GO:0003333 APT61_RS04250 f0cd38e2dfc29b222f6b4333cb82942d 409 PANTHER PTHR35334 1 409 0.0 T 22-04-2016 APT61_RS04250 f0cd38e2dfc29b222f6b4333cb82942d 409 PANTHER PTHR35334:SF3 1 409 0.0 T 22-04-2016 APT61_RS10730 aac0354de8ed5282da275fb4c3834cd5 532 PANTHER PTHR30290:SF14 10 525 1.3E-186 T 22-04-2016 APT61_RS10730 aac0354de8ed5282da275fb4c3834cd5 532 SUPERFAMILY SSF53850 27 523 9.95E-152 T 22-04-2016 APT61_RS10730 aac0354de8ed5282da275fb4c3834cd5 532 PANTHER PTHR30290 10 525 1.3E-186 T 22-04-2016 APT61_RS10730 aac0354de8ed5282da275fb4c3834cd5 532 Gene3D G3DSA:3.10.105.10 290 503 2.9E-69 T 22-04-2016 APT61_RS10730 aac0354de8ed5282da275fb4c3834cd5 532 Gene3D G3DSA:3.90.76.10 37 217 3.9E-46 T 22-04-2016 APT61_RS10730 aac0354de8ed5282da275fb4c3834cd5 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 451 1.1E-97 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS10730 aac0354de8ed5282da275fb4c3834cd5 532 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 77 99 - T 22-04-2016 IPR023765 Solute-binding protein family 5, conserved site APT61_RS10730 aac0354de8ed5282da275fb4c3834cd5 532 PIRSF PIRSF002741 3 532 3.1E-112 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APT61_RS16425 7b8d3bccfe1f3e6ae58657cadc8ff73c 383 SUPERFAMILY SSF50685 81 161 1.74E-6 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APT61_RS16425 7b8d3bccfe1f3e6ae58657cadc8ff73c 383 Pfam PF05036 Sporulation related domain 309 379 7.9E-16 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APT61_RS16425 7b8d3bccfe1f3e6ae58657cadc8ff73c 383 PANTHER PTHR34183:SF1 4 234 1.8E-125 T 22-04-2016 APT61_RS16425 7b8d3bccfe1f3e6ae58657cadc8ff73c 383 PANTHER PTHR34183:SF1 305 383 1.8E-125 T 22-04-2016 APT61_RS16425 7b8d3bccfe1f3e6ae58657cadc8ff73c 383 SUPERFAMILY SSF110997 309 379 1.28E-15 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APT61_RS16425 7b8d3bccfe1f3e6ae58657cadc8ff73c 383 Gene3D G3DSA:3.30.70.1070 306 380 3.0E-16 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APT61_RS16425 7b8d3bccfe1f3e6ae58657cadc8ff73c 383 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 82 181 1.6E-28 T 22-04-2016 IPR012997 Rare lipoprotein A APT61_RS16425 7b8d3bccfe1f3e6ae58657cadc8ff73c 383 Pfam PF03330 Lytic transglycolase 80 167 1.8E-19 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain APT61_RS16425 7b8d3bccfe1f3e6ae58657cadc8ff73c 383 PANTHER PTHR34183 4 234 1.8E-125 T 22-04-2016 APT61_RS16425 7b8d3bccfe1f3e6ae58657cadc8ff73c 383 PANTHER PTHR34183 305 383 1.8E-125 T 22-04-2016 APT61_RS11160 3f9b5425e1baa6d89b0b9266de0bfe9c 400 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 314 7.9E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS11160 3f9b5425e1baa6d89b0b9266de0bfe9c 400 PANTHER PTHR22912 5 324 6.0E-25 T 22-04-2016 APT61_RS11160 3f9b5425e1baa6d89b0b9266de0bfe9c 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.4E-17 T 22-04-2016 APT61_RS11160 3f9b5425e1baa6d89b0b9266de0bfe9c 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 2.4E-17 T 22-04-2016 APT61_RS11160 3f9b5425e1baa6d89b0b9266de0bfe9c 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.4E-17 T 22-04-2016 APT61_RS11160 3f9b5425e1baa6d89b0b9266de0bfe9c 400 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.4E-17 T 22-04-2016 APT61_RS11160 3f9b5425e1baa6d89b0b9266de0bfe9c 400 SUPERFAMILY SSF51905 1 323 2.07E-34 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS11160 3f9b5425e1baa6d89b0b9266de0bfe9c 400 Gene3D G3DSA:3.50.50.60 116 323 2.5E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS11160 3f9b5425e1baa6d89b0b9266de0bfe9c 400 Gene3D G3DSA:3.50.50.60 1 115 1.7E-15 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS11160 3f9b5425e1baa6d89b0b9266de0bfe9c 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 293 6.0E-7 T 22-04-2016 APT61_RS11160 3f9b5425e1baa6d89b0b9266de0bfe9c 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 6.0E-7 T 22-04-2016 APT61_RS11160 3f9b5425e1baa6d89b0b9266de0bfe9c 400 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 6.0E-7 T 22-04-2016 APT61_RS03505 1f34b7e50f2e1d2da0fe982105c7938e 488 Gene3D G3DSA:1.20.1250.20 291 477 1.9E-9 T 22-04-2016 APT61_RS03505 1f34b7e50f2e1d2da0fe982105c7938e 488 Gene3D G3DSA:1.20.1250.20 48 229 2.4E-22 T 22-04-2016 APT61_RS03505 1f34b7e50f2e1d2da0fe982105c7938e 488 PANTHER PTHR24064 24 483 5.9E-46 T 22-04-2016 APT61_RS03505 1f34b7e50f2e1d2da0fe982105c7938e 488 PANTHER PTHR24064:SF168 24 483 5.9E-46 T 22-04-2016 APT61_RS03505 1f34b7e50f2e1d2da0fe982105c7938e 488 SUPERFAMILY SSF103473 41 483 5.1E-56 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS03505 1f34b7e50f2e1d2da0fe982105c7938e 488 Pfam PF00083 Sugar (and other) transporter 48 465 2.4E-37 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APT61_RS01465 26fb6a716cd07dd9fcab689c1556c26f 208 Pfam PF07947 YhhN-like protein 26 206 9.8E-41 T 22-04-2016 IPR012506 YhhN-like GO:0016021 APT61_RS21915 a9ea7c4b422809680020b44154b68e9c 397 PANTHER PTHR23501 18 396 5.3E-269 T 22-04-2016 APT61_RS21915 a9ea7c4b422809680020b44154b68e9c 397 Gene3D G3DSA:1.20.1250.20 207 394 4.5E-10 T 22-04-2016 APT61_RS21915 a9ea7c4b422809680020b44154b68e9c 397 Gene3D G3DSA:1.20.1250.20 24 206 2.7E-25 T 22-04-2016 APT61_RS21915 a9ea7c4b422809680020b44154b68e9c 397 Pfam PF07690 Major Facilitator Superfamily 27 344 6.9E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS21915 a9ea7c4b422809680020b44154b68e9c 397 PANTHER PTHR23501:SF90 18 396 5.3E-269 T 22-04-2016 APT61_RS21915 a9ea7c4b422809680020b44154b68e9c 397 SUPERFAMILY SSF103473 12 393 4.71E-52 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS05805 204a60da240f6fef588ad5ef12423c7f 235 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.35 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APT61_RS05805 204a60da240f6fef588ad5ef12423c7f 235 SUPERFAMILY SSF57863 86 166 4.45E-8 T 22-04-2016 APT61_RS05805 204a60da240f6fef588ad5ef12423c7f 235 Pfam PF02565 Recombination protein O C terminal 83 226 1.5E-21 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APT61_RS05805 204a60da240f6fef588ad5ef12423c7f 235 Pfam PF11967 Recombination protein O N terminal 4 76 3.8E-23 T 22-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal APT61_RS05805 204a60da240f6fef588ad5ef12423c7f 235 Gene3D G3DSA:2.40.50.140 6 76 2.0E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS05805 204a60da240f6fef588ad5ef12423c7f 235 PANTHER PTHR33991 1 235 5.8E-65 T 22-04-2016 APT61_RS05805 204a60da240f6fef588ad5ef12423c7f 235 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 1.4E-37 T 22-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 APT61_RS05805 204a60da240f6fef588ad5ef12423c7f 235 SUPERFAMILY SSF50249 4 75 1.1E-14 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS14785 9cfe6e37dc72b9b472f5dc5eac42fb27 172 Gene3D G3DSA:3.10.129.10 2 169 3.7E-61 T 22-04-2016 IPR029069 HotDog domain APT61_RS14785 9cfe6e37dc72b9b472f5dc5eac42fb27 172 SUPERFAMILY SSF54637 3 169 4.06E-56 T 22-04-2016 IPR029069 HotDog domain APT61_RS14785 9cfe6e37dc72b9b472f5dc5eac42fb27 172 Pfam PF07977 FabA-like domain 29 158 3.8E-54 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APT61_RS14785 9cfe6e37dc72b9b472f5dc5eac42fb27 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 8.9E-98 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APT61_RS14785 9cfe6e37dc72b9b472f5dc5eac42fb27 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.767 T 22-04-2016 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APT61_RS19680 043e89165990bbb5c7112a8e5d807608 85 TIGRFAM TIGR03510 XapX: XapX domain 5 48 4.4E-17 T 22-04-2016 IPR020017 XapX domain APT61_RS19680 043e89165990bbb5c7112a8e5d807608 85 Pfam PF07235 Protein of unknown function (DUF1427) 2 75 2.6E-29 T 22-04-2016 IPR009872 Protein of unknown function DUF1427 APT61_RS03580 145c90a2ea2c6394db39a363ab5328e0 257 Hamap MF_00548 Zinc transporter ZupT [zupT]. 1 252 30.014 T 22-04-2016 IPR023498 Zinc transporter ZupT APT61_RS03580 145c90a2ea2c6394db39a363ab5328e0 257 PANTHER PTHR11040:SF56 5 254 5.7E-75 T 22-04-2016 APT61_RS03580 145c90a2ea2c6394db39a363ab5328e0 257 PANTHER PTHR11040 5 254 5.7E-75 T 22-04-2016 APT61_RS03580 145c90a2ea2c6394db39a363ab5328e0 257 Pfam PF02535 ZIP Zinc transporter 7 91 1.8E-7 T 22-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 APT61_RS03580 145c90a2ea2c6394db39a363ab5328e0 257 Pfam PF02535 ZIP Zinc transporter 94 246 6.3E-25 T 22-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 APT61_RS13695 f4c9428a032d386e714aec709401f45a 118 Pfam PF05866 Endodeoxyribonuclease RusA 48 114 1.2E-13 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APT61_RS13695 f4c9428a032d386e714aec709401f45a 118 Gene3D G3DSA:3.30.1330.70 48 114 6.0E-7 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APT61_RS13695 f4c9428a032d386e714aec709401f45a 118 SUPERFAMILY SSF103084 44 114 1.96E-9 T 22-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 APT61_RS08080 d2a624e8fb50f00be533eb3d6b5c6df3 399 PANTHER PTHR37533 195 399 2.6E-62 T 22-04-2016 APT61_RS08080 d2a624e8fb50f00be533eb3d6b5c6df3 399 PRINTS PR01007 Flagellar hook-length control protein signature 302 317 9.5E-81 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APT61_RS08080 d2a624e8fb50f00be533eb3d6b5c6df3 399 PRINTS PR01007 Flagellar hook-length control protein signature 284 302 9.5E-81 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APT61_RS08080 d2a624e8fb50f00be533eb3d6b5c6df3 399 PRINTS PR01007 Flagellar hook-length control protein signature 2 15 9.5E-81 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APT61_RS08080 d2a624e8fb50f00be533eb3d6b5c6df3 399 PRINTS PR01007 Flagellar hook-length control protein signature 382 398 9.5E-81 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APT61_RS08080 d2a624e8fb50f00be533eb3d6b5c6df3 399 PRINTS PR01007 Flagellar hook-length control protein signature 21 38 9.5E-81 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APT61_RS08080 d2a624e8fb50f00be533eb3d6b5c6df3 399 PRINTS PR01007 Flagellar hook-length control protein signature 236 258 9.5E-81 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APT61_RS08080 d2a624e8fb50f00be533eb3d6b5c6df3 399 PRINTS PR01007 Flagellar hook-length control protein signature 127 150 9.5E-81 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APT61_RS08080 d2a624e8fb50f00be533eb3d6b5c6df3 399 PRINTS PR01007 Flagellar hook-length control protein signature 259 281 9.5E-81 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APT61_RS08080 d2a624e8fb50f00be533eb3d6b5c6df3 399 PRINTS PR01007 Flagellar hook-length control protein signature 317 340 9.5E-81 T 22-04-2016 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 APT61_RS08080 d2a624e8fb50f00be533eb3d6b5c6df3 399 PANTHER PTHR37533:SF2 195 399 2.6E-62 T 22-04-2016 APT61_RS08080 d2a624e8fb50f00be533eb3d6b5c6df3 399 Pfam PF02120 Flagellar hook-length control protein FliK 272 351 1.1E-19 T 22-04-2016 IPR021136 Flagellar hook-length control protein-like, C-terminal APT61_RS13120 b73c1c7b451791fbc6aaf1289064ffab 118 PANTHER PTHR34382 11 118 1.6E-50 T 22-04-2016 APT61_RS13120 b73c1c7b451791fbc6aaf1289064ffab 118 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 22 115 4.4E-33 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS13120 b73c1c7b451791fbc6aaf1289064ffab 118 Gene3D G3DSA:1.20.58.80 17 117 2.3E-41 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS13120 b73c1c7b451791fbc6aaf1289064ffab 118 PANTHER PTHR34382:SF2 11 118 1.6E-50 T 22-04-2016 APT61_RS13120 b73c1c7b451791fbc6aaf1289064ffab 118 SUPERFAMILY SSF46973 17 116 1.16E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS13120 b73c1c7b451791fbc6aaf1289064ffab 118 PIRSF PIRSF000699 13 118 2.1E-39 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS08755 4b981798a53a5d2707c88112a0e282da 47 Hamap MF_01596 PhoP/PhoQ regulator MgrB [mgrB]. 1 47 19.042 T 22-04-2016 IPR020907 PhoP/PhoQ regulator MgrB APT61_RS08755 4b981798a53a5d2707c88112a0e282da 47 Pfam PF13998 MgrB protein 19 47 4.7E-17 T 22-04-2016 IPR020907 PhoP/PhoQ regulator MgrB APT61_RS07535 b923bf49025d9e52ca244a74f69cb7ee 257 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS07535 b923bf49025d9e52ca244a74f69cb7ee 257 Pfam PF00005 ABC transporter 22 167 1.0E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS07535 b923bf49025d9e52ca244a74f69cb7ee 257 PANTHER PTHR24220 3 242 2.4E-95 T 22-04-2016 APT61_RS07535 b923bf49025d9e52ca244a74f69cb7ee 257 SUPERFAMILY SSF52540 1 230 5.33E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07535 b923bf49025d9e52ca244a74f69cb7ee 257 Gene3D G3DSA:3.40.50.300 1 252 1.1E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07535 b923bf49025d9e52ca244a74f69cb7ee 257 PANTHER PTHR24220:SF336 3 242 2.4E-95 T 22-04-2016 APT61_RS07535 b923bf49025d9e52ca244a74f69cb7ee 257 SMART SM00382 30 216 5.8E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS09905 d4f97865c492e5b8f3963787fd5bb4ac 436 PANTHER PTHR37024 7 430 2.7E-34 T 22-04-2016 APT61_RS09905 d4f97865c492e5b8f3963787fd5bb4ac 436 PANTHER PTHR37024:SF1 7 430 2.7E-34 T 22-04-2016 APT61_RS09905 d4f97865c492e5b8f3963787fd5bb4ac 436 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 112 2.4E-20 T 22-04-2016 IPR010657 ImpA, N-terminal APT61_RS09905 d4f97865c492e5b8f3963787fd5bb4ac 436 Pfam PF12486 Type VI secretion system, EvfB, or VasL 287 431 1.0E-48 T 22-04-2016 IPR021069 ImpA, C-terminal APT61_RS05880 b5dcdbca5bffaa66920dbf7f2b564ab9 417 Gene3D G3DSA:3.40.640.10 37 285 3.6E-108 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS05880 b5dcdbca5bffaa66920dbf7f2b564ab9 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APT61_RS05880 b5dcdbca5bffaa66920dbf7f2b564ab9 417 SUPERFAMILY SSF53383 6 416 4.76E-185 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS05880 b5dcdbca5bffaa66920dbf7f2b564ab9 417 PANTHER PTHR11680:SF9 1 416 0.0 T 22-04-2016 APT61_RS05880 b5dcdbca5bffaa66920dbf7f2b564ab9 417 PANTHER PTHR11680 1 416 0.0 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APT61_RS05880 b5dcdbca5bffaa66920dbf7f2b564ab9 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 1.1E-189 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APT61_RS05880 b5dcdbca5bffaa66920dbf7f2b564ab9 417 PIRSF PIRSF000412 1 417 1.3E-175 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APT61_RS05880 b5dcdbca5bffaa66920dbf7f2b564ab9 417 Gene3D G3DSA:3.90.1150.10 286 416 3.7E-56 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS05880 b5dcdbca5bffaa66920dbf7f2b564ab9 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.494 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 APT61_RS18860 f6b657e9d337a081b8451897220b6edb 219 Pfam PF00849 RNA pseudouridylate synthase 22 169 9.0E-31 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS18860 f6b657e9d337a081b8451897220b6edb 219 PANTHER PTHR11079 3 218 8.2E-79 T 22-04-2016 APT61_RS18860 f6b657e9d337a081b8451897220b6edb 219 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS18860 f6b657e9d337a081b8451897220b6edb 219 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 7 218 1.3E-59 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS18860 f6b657e9d337a081b8451897220b6edb 219 PANTHER PTHR11079:SF86 3 218 8.2E-79 T 22-04-2016 APT61_RS18860 f6b657e9d337a081b8451897220b6edb 219 SUPERFAMILY SSF55120 8 216 8.48E-64 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS16750 3a41b98c11919073cf82c4778a4a40d0 1088 Gene3D G3DSA:3.40.50.300 545 617 7.6E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16750 3a41b98c11919073cf82c4778a4a40d0 1088 Gene3D G3DSA:3.40.50.300 421 498 7.6E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16750 3a41b98c11919073cf82c4778a4a40d0 1088 TIGRFAM TIGR02562 cas3_yersinia: CRISPR-associated helicase Cas3, subtype I-F/YPEST 1 1085 0.0 T 22-04-2016 IPR013395 Helicase Cas3, CRISPR-associated, Yersinia-type APT61_RS16750 3a41b98c11919073cf82c4778a4a40d0 1088 SUPERFAMILY SSF52540 816 860 1.33E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16750 3a41b98c11919073cf82c4778a4a40d0 1088 SUPERFAMILY SSF52540 420 468 1.33E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16750 3a41b98c11919073cf82c4778a4a40d0 1088 SUPERFAMILY SSF52540 543 617 1.33E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16750 3a41b98c11919073cf82c4778a4a40d0 1088 SUPERFAMILY SSF52540 696 785 1.33E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03560 4135a50abdad4222c481bb3cac538c41 353 Gene3D G3DSA:2.60.40.1090 226 353 3.0E-4 T 22-04-2016 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 APT61_RS03560 4135a50abdad4222c481bb3cac538c41 353 SUPERFAMILY SSF49401 227 353 2.88E-6 T 22-04-2016 IPR008966 Adhesion domain APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 SUPERFAMILY SSF51735 3 167 2.37E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 22-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 SUPERFAMILY SSF56327 173 441 2.07E-77 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 PANTHER PTHR32092:SF5 2 443 6.5E-254 T 22-04-2016 APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 4.2E-51 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 4.2E-51 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 4.2E-51 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 4.2E-51 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 4.2E-51 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 4.2E-51 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 4.2E-51 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 199 415 6.3E-36 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 Gene3D G3DSA:3.40.50.720 3 168 1.2E-72 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 PANTHER PTHR32092 2 443 6.5E-254 T 22-04-2016 APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 4.7E-75 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 APT61_RS13110 23f2f0a322c336f914584d5403065f1a 451 Gene3D G3DSA:3.90.110.10 170 439 4.9E-86 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 SMART SM00388 240 304 1.1E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 SUPERFAMILY SSF158472 188 236 9.15E-10 T 22-04-2016 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 1.3E-12 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 PANTHER PTHR24423:SF531 181 462 2.3E-168 T 22-04-2016 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 PANTHER PTHR24423:SF531 1 10 2.3E-168 T 22-04-2016 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 Gene3D G3DSA:3.30.565.10 291 460 8.3E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 SUPERFAMILY SSF47384 223 304 1.14E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 460 1.3E-19 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 PANTHER PTHR24423 181 462 2.3E-168 T 22-04-2016 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 PANTHER PTHR24423 1 10 2.3E-168 T 22-04-2016 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 Pfam PF00672 HAMP domain 168 235 1.3E-15 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 SMART SM00304 187 239 2.7E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 SMART SM00387 349 461 1.2E-35 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 304 5.6E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 Gene3D G3DSA:1.10.287.130 232 290 3.7E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 APT61_RS07595 1954d491d72fd9aa96c2027b1fdb6226 467 SUPERFAMILY SSF55874 293 459 1.02E-39 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain APT61_RS07910 44cfe43443a21c6d8812230d692e51c6 491 PIRSF PIRSF006603 17 474 1.2E-68 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APT61_RS07910 44cfe43443a21c6d8812230d692e51c6 491 Pfam PF01554 MatE 37 197 8.7E-36 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APT61_RS07910 44cfe43443a21c6d8812230d692e51c6 491 Pfam PF01554 MatE 267 428 8.0E-20 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APT61_RS07910 44cfe43443a21c6d8812230d692e51c6 491 TIGRFAM TIGR00797 matE: MATE efflux family protein 37 441 2.4E-66 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APT61_RS07910 44cfe43443a21c6d8812230d692e51c6 491 PANTHER PTHR11206:SF95 29 491 2.1E-104 T 22-04-2016 APT61_RS07910 44cfe43443a21c6d8812230d692e51c6 491 PANTHER PTHR11206 29 491 2.1E-104 T 22-04-2016 APT61_RS08500 9ff7234a7cbe6d5d73a989bb6cf8559e 527 Pfam PF13347 MFS/sugar transport protein 13 451 1.0E-56 T 22-04-2016 APT61_RS08500 9ff7234a7cbe6d5d73a989bb6cf8559e 527 PANTHER PTHR11328:SF24 1 492 4.4E-81 T 22-04-2016 APT61_RS08500 9ff7234a7cbe6d5d73a989bb6cf8559e 527 Gene3D G3DSA:1.20.1250.20 19 221 6.7E-16 T 22-04-2016 APT61_RS08500 9ff7234a7cbe6d5d73a989bb6cf8559e 527 Gene3D G3DSA:1.20.1250.20 250 444 1.9E-6 T 22-04-2016 APT61_RS08500 9ff7234a7cbe6d5d73a989bb6cf8559e 527 PANTHER PTHR11328 1 492 4.4E-81 T 22-04-2016 APT61_RS08500 9ff7234a7cbe6d5d73a989bb6cf8559e 527 SUPERFAMILY SSF103473 10 448 2.49E-33 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS13345 f7ba0b6f527b25d1c7eb9d78fdcc72b6 1046 Pfam PF06791 Prophage tail length tape measure protein 214 423 1.8E-65 T 22-04-2016 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal APT61_RS13345 f7ba0b6f527b25d1c7eb9d78fdcc72b6 1046 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 814 888 2.4E-11 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APT61_RS13345 f7ba0b6f527b25d1c7eb9d78fdcc72b6 1046 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 693 998 1.6E-34 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.6E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 2.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.1E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 PANTHER PTHR24322 153 184 1.7E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 PANTHER PTHR24322 7 137 1.7E-47 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 184 0.002 T 22-04-2016 APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 4.0E-55 T 22-04-2016 APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 SUPERFAMILY SSF51735 3 242 2.57E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 243 5.3E-135 T 22-04-2016 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 APT61_RS01340 dfc39d4dab4328ddbd7b314d11b4f9f4 243 Gene3D G3DSA:3.40.50.720 3 242 6.3E-71 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS21200 10a3ae934b94c91cb560b8c7f84c7899 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 3.2E-31 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APT61_RS21200 10a3ae934b94c91cb560b8c7f84c7899 121 SUPERFAMILY SSF48300 3 57 3.53E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS21200 10a3ae934b94c91cb560b8c7f84c7899 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.559 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS21200 10a3ae934b94c91cb560b8c7f84c7899 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 3.9E-17 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS21200 10a3ae934b94c91cb560b8c7f84c7899 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 3.5E-48 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS21200 10a3ae934b94c91cb560b8c7f84c7899 121 SUPERFAMILY SSF54736 50 121 4.19E-25 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APT61_RS21200 10a3ae934b94c91cb560b8c7f84c7899 121 Gene3D G3DSA:1.20.5.710 2 50 7.3E-23 T 22-04-2016 APT61_RS21200 10a3ae934b94c91cb560b8c7f84c7899 121 Gene3D G3DSA:3.30.1390.10 51 121 3.5E-34 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like APT61_RS21200 10a3ae934b94c91cb560b8c7f84c7899 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 4.0E-27 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 APT61_RS17385 ff81b7b67abc9b59566318b058ae4859 197 PANTHER PTHR11019:SF4 1 194 8.8E-75 T 22-04-2016 APT61_RS17385 ff81b7b67abc9b59566318b058ae4859 197 Pfam PF01965 DJ-1/PfpI family 4 170 1.6E-47 T 22-04-2016 IPR002818 DJ-1/PfpI APT61_RS17385 ff81b7b67abc9b59566318b058ae4859 197 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 183 1.4E-62 T 22-04-2016 IPR006287 DJ-1 APT61_RS17385 ff81b7b67abc9b59566318b058ae4859 197 PANTHER PTHR11019 1 194 8.8E-75 T 22-04-2016 APT61_RS17385 ff81b7b67abc9b59566318b058ae4859 197 SUPERFAMILY SSF52317 5 188 8.32E-49 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS17385 ff81b7b67abc9b59566318b058ae4859 197 Gene3D G3DSA:3.40.50.880 2 188 4.5E-58 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS16565 e54004f8d6798eac81104db514ebb983 331 PANTHER PTHR32196:SF21 2 331 2.5E-105 T 22-04-2016 APT61_RS16565 e54004f8d6798eac81104db514ebb983 331 PANTHER PTHR32196 2 331 2.5E-105 T 22-04-2016 APT61_RS16565 e54004f8d6798eac81104db514ebb983 331 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 323 7.4E-36 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 SUPERFAMILY SSF52833 1 101 1.23E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 Gene3D G3DSA:3.40.30.10 1 94 4.1E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 Gene3D G3DSA:3.50.50.60 324 510 8.5E-40 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 Gene3D G3DSA:3.40.30.10 105 196 1.7E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 SUPERFAMILY SSF51905 207 513 6.79E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 Pfam PF13192 Thioredoxin domain 126 194 1.5E-7 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PANTHER PTHR22912 199 514 1.5E-215 T 22-04-2016 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 2.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 2.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 2.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 2.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 2.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 2.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 2.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 2.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 2.0E-66 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 517 1.1E-239 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 503 2.0E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 5.6E-38 T 22-04-2016 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 5.6E-38 T 22-04-2016 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 5.6E-38 T 22-04-2016 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 5.6E-38 T 22-04-2016 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 5.6E-38 T 22-04-2016 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PIRSF PIRSF000238 1 520 6.1E-262 T 22-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 Gene3D G3DSA:3.50.50.60 211 323 1.9E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 PANTHER PTHR22912:SF107 199 514 1.5E-215 T 22-04-2016 APT61_RS16510 977cbccca42fb26a0a8128531bca22c0 520 SUPERFAMILY SSF52833 106 197 1.94E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS02505 3e85653d56dfdcdb6b3a989cad103ee3 142 Pfam PF00572 Ribosomal protein L13 15 138 8.1E-57 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APT61_RS02505 3e85653d56dfdcdb6b3a989cad103ee3 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 1.5E-67 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 APT61_RS02505 3e85653d56dfdcdb6b3a989cad103ee3 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.422 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APT61_RS02505 3e85653d56dfdcdb6b3a989cad103ee3 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 22-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 APT61_RS02505 3e85653d56dfdcdb6b3a989cad103ee3 142 PIRSF PIRSF002181 1 142 4.4E-51 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APT61_RS02505 3e85653d56dfdcdb6b3a989cad103ee3 142 PANTHER PTHR11545 1 142 1.2E-80 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 APT61_RS02505 3e85653d56dfdcdb6b3a989cad103ee3 142 SUPERFAMILY SSF52161 1 140 2.75E-60 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APT61_RS02505 3e85653d56dfdcdb6b3a989cad103ee3 142 Gene3D G3DSA:3.90.1180.10 3 141 6.6E-65 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 APT61_RS18495 a284760326f7456c6690154a9af3aae5 254 SUPERFAMILY SSF48008 95 234 1.31E-19 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS18495 a284760326f7456c6690154a9af3aae5 254 SMART SM00345 15 74 3.0E-29 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS18495 a284760326f7456c6690154a9af3aae5 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.5E-25 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS18495 a284760326f7456c6690154a9af3aae5 254 SUPERFAMILY SSF46785 6 76 3.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18495 a284760326f7456c6690154a9af3aae5 254 PANTHER PTHR11751:SF355 93 115 4.6E-51 T 22-04-2016 APT61_RS18495 a284760326f7456c6690154a9af3aae5 254 PANTHER PTHR11751:SF355 1 77 4.6E-51 T 22-04-2016 APT61_RS18495 a284760326f7456c6690154a9af3aae5 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.9E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS18495 a284760326f7456c6690154a9af3aae5 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.9E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS18495 a284760326f7456c6690154a9af3aae5 254 Pfam PF07729 FCD domain 99 226 4.4E-17 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS18495 a284760326f7456c6690154a9af3aae5 254 Gene3D G3DSA:1.20.120.530 95 238 1.5E-17 T 22-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal APT61_RS18495 a284760326f7456c6690154a9af3aae5 254 SMART SM00895 99 227 2.6E-16 T 22-04-2016 IPR011711 GntR, C-terminal APT61_RS18495 a284760326f7456c6690154a9af3aae5 254 Gene3D G3DSA:1.10.10.10 7 76 1.7E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18495 a284760326f7456c6690154a9af3aae5 254 PANTHER PTHR11751 93 115 4.6E-51 T 22-04-2016 APT61_RS18495 a284760326f7456c6690154a9af3aae5 254 PANTHER PTHR11751 1 77 4.6E-51 T 22-04-2016 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 Pfam PF13090 Polyphosphate kinase C-terminal domain 331 676 5.4E-145 T 22-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 SUPERFAMILY SSF140356 3 105 2.62E-33 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 677 3.9E-258 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 6.9E-31 T 22-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 Gene3D G3DSA:3.30.870.10 500 682 1.3E-68 T 22-04-2016 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 Pfam PF02503 Polyphosphate kinase middle domain 119 319 6.0E-42 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 PANTHER PTHR30218 1 686 0.0 T 22-04-2016 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 PANTHER PTHR30218:SF0 1 686 0.0 T 22-04-2016 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 SUPERFAMILY SSF143724 107 313 1.33E-59 T 22-04-2016 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 SUPERFAMILY SSF56024 315 496 4.4E-58 T 22-04-2016 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 Gene3D G3DSA:3.30.1840.10 106 300 4.5E-52 T 22-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 SUPERFAMILY SSF56024 501 682 1.1E-69 T 22-04-2016 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 Hamap MF_00347 Polyphosphate kinase [ppk]. 4 681 35.766 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 PIRSF PIRSF015589 1 685 5.5E-243 T 22-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 APT61_RS06130 a9545be309a2fb9aede9d3de60c6feb2 686 Gene3D G3DSA:3.30.870.10 315 499 1.3E-75 T 22-04-2016 APT61_RS19100 c6cb4ebb163b22a3470e09f2b1276e56 108 Pfam PF01371 Trp repressor protein 17 102 1.0E-28 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 APT61_RS19100 c6cb4ebb163b22a3470e09f2b1276e56 108 SUPERFAMILY SSF48295 5 105 1.83E-29 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 APT61_RS19100 c6cb4ebb163b22a3470e09f2b1276e56 108 Gene3D G3DSA:1.10.1270.10 10 107 1.6E-46 T 22-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 APT61_RS19100 c6cb4ebb163b22a3470e09f2b1276e56 108 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 10 101 1.0E-38 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 APT61_RS19100 c6cb4ebb163b22a3470e09f2b1276e56 108 PANTHER PTHR38025 1 108 8.7E-46 T 22-04-2016 APT61_RS19100 c6cb4ebb163b22a3470e09f2b1276e56 108 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 24.293 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 APT61_RS19100 c6cb4ebb163b22a3470e09f2b1276e56 108 PIRSF PIRSF003196 7 108 3.0E-40 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 APT61_RS19100 c6cb4ebb163b22a3470e09f2b1276e56 108 PANTHER PTHR38025:SF1 1 108 8.7E-46 T 22-04-2016 APT61_RS19100 c6cb4ebb163b22a3470e09f2b1276e56 108 TIGRFAM TIGR01321 TrpR: trp operon repressor 11 102 4.0E-40 T 22-04-2016 IPR013335 Trp repressor, bacterial GO:0006355 APT61_RS06550 b41ec6f1e7bab5efbe14f4b3c4fa9589 449 Gene3D G3DSA:1.20.1600.10 17 421 3.7E-61 T 22-04-2016 APT61_RS06550 b41ec6f1e7bab5efbe14f4b3c4fa9589 449 PANTHER PTHR30026:SF4 1 444 1.1E-67 T 22-04-2016 APT61_RS06550 b41ec6f1e7bab5efbe14f4b3c4fa9589 449 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 430 5.9E-88 T 22-04-2016 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 APT61_RS06550 b41ec6f1e7bab5efbe14f4b3c4fa9589 449 PANTHER PTHR30026 1 444 1.1E-67 T 22-04-2016 APT61_RS06550 b41ec6f1e7bab5efbe14f4b3c4fa9589 449 Pfam PF02321 Outer membrane efflux protein 25 216 1.3E-23 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APT61_RS06550 b41ec6f1e7bab5efbe14f4b3c4fa9589 449 Pfam PF02321 Outer membrane efflux protein 234 403 1.1E-24 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APT61_RS06550 b41ec6f1e7bab5efbe14f4b3c4fa9589 449 SUPERFAMILY SSF56954 24 430 1.83E-77 T 22-04-2016 APT61_RS15975 98b6d9be0cf683b5d2953a3912efb388 239 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 231 4.6E-71 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APT61_RS15975 98b6d9be0cf683b5d2953a3912efb388 239 Pfam PF04973 Nicotinamide mononucleotide transporter 23 226 1.1E-51 T 22-04-2016 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 APT61_RS15975 98b6d9be0cf683b5d2953a3912efb388 239 PANTHER PTHR36122 133 239 5.6E-122 T 22-04-2016 APT61_RS15975 98b6d9be0cf683b5d2953a3912efb388 239 PANTHER PTHR36122 1 110 5.6E-122 T 22-04-2016 APT61_RS15975 98b6d9be0cf683b5d2953a3912efb388 239 PANTHER PTHR36122:SF2 133 239 5.6E-122 T 22-04-2016 APT61_RS15975 98b6d9be0cf683b5d2953a3912efb388 239 PANTHER PTHR36122:SF2 1 110 5.6E-122 T 22-04-2016 APT61_RS02415 21827f973446eac183651e6c90f89b48 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 2.7E-43 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 APT61_RS02415 21827f973446eac183651e6c90f89b48 162 PANTHER PTHR37484 1 162 4.8E-74 T 22-04-2016 APT61_RS02415 21827f973446eac183651e6c90f89b48 162 PIRSF PIRSF018472 2 162 2.0E-57 T 22-04-2016 IPR026034 Cell shape-determining protein MreD, proteobacterial type APT61_RS02415 21827f973446eac183651e6c90f89b48 162 Pfam PF04093 rod shape-determining protein MreD 5 155 2.8E-45 T 22-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 APT61_RS13435 80bd0c35a52ef97cffb567dc77aaf129 428 PANTHER PTHR30510 1 428 4.7E-196 T 22-04-2016 APT61_RS13435 80bd0c35a52ef97cffb567dc77aaf129 428 Pfam PF04285 Protein of unknown function (DUF444) 4 422 4.3E-186 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 APT61_RS13435 80bd0c35a52ef97cffb567dc77aaf129 428 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 424 41.923 T 22-04-2016 IPR006698 Uncharacterised protein family UPF0229 APT61_RS10950 461d46fcdb32fffc578b2ed953418bc0 205 SUPERFAMILY SSF50494 56 196 6.14E-12 T 22-04-2016 IPR009003 Peptidase S1, PA clan APT61_RS10950 461d46fcdb32fffc578b2ed953418bc0 205 Gene3D G3DSA:2.40.10.10 108 198 1.0E-5 T 22-04-2016 APT61_RS16200 4b233bb9089450b27445cc8577547cee 191 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 32.661 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 APT61_RS16200 4b233bb9089450b27445cc8577547cee 191 Pfam PF02669 K+-transporting ATPase, c chain 5 186 1.5E-65 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 APT61_RS16200 4b233bb9089450b27445cc8577547cee 191 PANTHER PTHR30042 1 189 3.4E-84 T 22-04-2016 APT61_RS16200 4b233bb9089450b27445cc8577547cee 191 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 187 5.5E-80 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 APT61_RS16200 4b233bb9089450b27445cc8577547cee 191 PANTHER PTHR30042:SF2 1 189 3.4E-84 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 APT61_RS16200 4b233bb9089450b27445cc8577547cee 191 PIRSF PIRSF001296 1 191 1.3E-70 T 22-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 APT61_RS21255 2e5866ca586b4b05b44e41009b46a65f 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 187.498 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APT61_RS21255 2e5866ca586b4b05b44e41009b46a65f 316 PIRSF PIRSF000545 1 316 1.1E-147 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APT61_RS21255 2e5866ca586b4b05b44e41009b46a65f 316 PANTHER PTHR10285 278 316 6.9E-173 T 22-04-2016 APT61_RS21255 2e5866ca586b4b05b44e41009b46a65f 316 PANTHER PTHR10285 1 262 6.9E-173 T 22-04-2016 APT61_RS21255 2e5866ca586b4b05b44e41009b46a65f 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 245 1.1E-13 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 APT61_RS21255 2e5866ca586b4b05b44e41009b46a65f 316 PANTHER PTHR10285:SF7 278 316 6.9E-173 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APT61_RS21255 2e5866ca586b4b05b44e41009b46a65f 316 PANTHER PTHR10285:SF7 1 262 6.9E-173 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APT61_RS21255 2e5866ca586b4b05b44e41009b46a65f 316 SUPERFAMILY SSF52540 10 315 4.57E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21255 2e5866ca586b4b05b44e41009b46a65f 316 Gene3D G3DSA:3.40.50.300 10 316 3.4E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS21255 2e5866ca586b4b05b44e41009b46a65f 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 1.1E-173 T 22-04-2016 IPR004566 Bacterial pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 APT61_RS00570 53efd7e5274780de568c4186ba039f4f 327 PANTHER PTHR11064 80 327 1.9E-103 T 22-04-2016 APT61_RS00570 53efd7e5274780de568c4186ba039f4f 327 SUPERFAMILY SSF110997 252 323 1.96E-19 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APT61_RS00570 53efd7e5274780de568c4186ba039f4f 327 Pfam PF05036 Sporulation related domain 254 321 2.3E-16 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APT61_RS00570 53efd7e5274780de568c4186ba039f4f 327 Hamap MF_02039 Cell division protein FtsN [ftsN]. 36 327 34.088 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 APT61_RS00570 53efd7e5274780de568c4186ba039f4f 327 PANTHER PTHR11064:SF39 80 327 1.9E-103 T 22-04-2016 APT61_RS00570 53efd7e5274780de568c4186ba039f4f 327 Gene3D G3DSA:3.30.70.1070 249 324 5.6E-31 T 22-04-2016 IPR007730 Sporulation-related domain GO:0042834 APT61_RS00570 53efd7e5274780de568c4186ba039f4f 327 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 323 4.3E-95 T 22-04-2016 IPR011930 Cell division protein FtsN GO:0005515 APT61_RS11330 77ade9591b3f9377ccfe1e933243716f 393 PANTHER PTHR11751 13 389 2.2E-104 T 22-04-2016 APT61_RS11330 77ade9591b3f9377ccfe1e933243716f 393 PANTHER PTHR11751:SF294 13 389 2.2E-104 T 22-04-2016 APT61_RS11330 77ade9591b3f9377ccfe1e933243716f 393 SUPERFAMILY SSF53383 5 391 1.28E-100 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS11330 77ade9591b3f9377ccfe1e933243716f 393 Gene3D G3DSA:3.90.1150.10 277 391 3.0E-11 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS11330 77ade9591b3f9377ccfe1e933243716f 393 Gene3D G3DSA:3.40.640.10 60 276 2.4E-77 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS11330 77ade9591b3f9377ccfe1e933243716f 393 Pfam PF00155 Aminotransferase class I and II 61 389 8.7E-39 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS14000 40299711304df7218c87b50234370cf1 334 PANTHER PTHR30100 1 334 6.2E-138 T 22-04-2016 APT61_RS14000 40299711304df7218c87b50234370cf1 334 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 329 7.4E-139 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APT61_RS14000 40299711304df7218c87b50234370cf1 334 PANTHER PTHR30100:SF1 1 334 6.2E-138 T 22-04-2016 APT61_RS14000 40299711304df7218c87b50234370cf1 334 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 334 142.805 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APT61_RS14000 40299711304df7218c87b50234370cf1 334 Gene3D G3DSA:3.40.718.10 1 329 1.0E-131 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 APT61_RS14000 40299711304df7218c87b50234370cf1 334 Pfam PF02504 Fatty acid synthesis protein 1 321 1.9E-122 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 APT61_RS14000 40299711304df7218c87b50234370cf1 334 PIRSF PIRSF002465 1 334 1.8E-123 T 22-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 APT61_RS14000 40299711304df7218c87b50234370cf1 334 SUPERFAMILY SSF53659 1 330 5.35E-101 T 22-04-2016 APT61_RS21810 42d16b7d86a3a75803390d548569850b 96 Gene3D G3DSA:2.10.260.10 39 64 3.2E-4 T 22-04-2016 APT61_RS21810 42d16b7d86a3a75803390d548569850b 96 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 17 65 1.4E-15 T 22-04-2016 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 APT61_RS08025 15b91e92ff0154f7d62aa7dd339c74ea 270 PANTHER PTHR10000 1 266 2.1E-113 T 22-04-2016 APT61_RS08025 15b91e92ff0154f7d62aa7dd339c74ea 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 230 8.2E-32 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APT61_RS08025 15b91e92ff0154f7d62aa7dd339c74ea 270 Gene3D G3DSA:3.30.980.20 94 178 2.0E-34 T 22-04-2016 APT61_RS08025 15b91e92ff0154f7d62aa7dd339c74ea 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 10 83 2.8E-9 T 22-04-2016 IPR023214 HAD-like domain APT61_RS08025 15b91e92ff0154f7d62aa7dd339c74ea 270 PANTHER PTHR10000:SF19 1 266 2.1E-113 T 22-04-2016 APT61_RS08025 15b91e92ff0154f7d62aa7dd339c74ea 270 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 174 267 4.1E-7 T 22-04-2016 IPR006380 Sucrose-phosphatase, N-terminal APT61_RS08025 15b91e92ff0154f7d62aa7dd339c74ea 270 Gene3D G3DSA:3.40.50.1000 179 264 8.3E-36 T 22-04-2016 IPR023214 HAD-like domain APT61_RS08025 15b91e92ff0154f7d62aa7dd339c74ea 270 Gene3D G3DSA:3.40.50.1000 9 89 8.3E-36 T 22-04-2016 IPR023214 HAD-like domain APT61_RS08025 15b91e92ff0154f7d62aa7dd339c74ea 270 TIGRFAM TIGR02463 MPGP_rel: mannosyl-3-phosphoglycerate phosphatase homolog 9 232 6.2E-87 T 22-04-2016 APT61_RS08025 15b91e92ff0154f7d62aa7dd339c74ea 270 SUPERFAMILY SSF56784 5 232 1.49E-40 T 22-04-2016 IPR023214 HAD-like domain APT61_RS08025 15b91e92ff0154f7d62aa7dd339c74ea 270 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 9 267 9.5E-90 T 22-04-2016 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 APT61_RS06165 ab466286be0491f179241155454eb9ab 119 Gene3D G3DSA:3.40.30.10 4 118 4.4E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS06165 ab466286be0491f179241155454eb9ab 119 PANTHER PTHR30041:SF4 3 118 2.2E-67 T 22-04-2016 APT61_RS06165 ab466286be0491f179241155454eb9ab 119 Pfam PF03960 ArsC family 8 117 6.1E-22 T 22-04-2016 IPR006660 Arsenate reductase-like APT61_RS06165 ab466286be0491f179241155454eb9ab 119 SUPERFAMILY SSF52833 5 118 6.38E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS06165 ab466286be0491f179241155454eb9ab 119 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 117 2.6E-48 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 APT61_RS06165 ab466286be0491f179241155454eb9ab 119 PANTHER PTHR30041 3 118 2.2E-67 T 22-04-2016 APT61_RS03950 650b3fbd016fa279d7fe3578aaf83b87 120 PANTHER PTHR38590:SF1 1 118 2.3E-49 T 22-04-2016 APT61_RS03950 650b3fbd016fa279d7fe3578aaf83b87 120 PANTHER PTHR38590 1 118 2.3E-49 T 22-04-2016 APT61_RS03950 650b3fbd016fa279d7fe3578aaf83b87 120 Gene3D G3DSA:3.40.960.10 69 111 0.001 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 APT61_RS03950 650b3fbd016fa279d7fe3578aaf83b87 120 SUPERFAMILY SSF52980 6 117 4.61E-23 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APT61_RS03950 650b3fbd016fa279d7fe3578aaf83b87 120 Pfam PF04480 Protein of unknown function (DUF559) 4 110 2.4E-45 T 22-04-2016 IPR007569 Domain of unknown function DUF559 APT61_RS19740 d7c42cd2c17af5605254c1c958f81e4a 367 PIRSF PIRSF003109 4 364 8.1E-103 T 22-04-2016 IPR014407 McrBC 5-methylcytosine restriction system component, bacterial APT61_RS19740 d7c42cd2c17af5605254c1c958f81e4a 367 Pfam PF10117 McrBC 5-methylcytosine restriction system component 11 307 3.4E-19 T 22-04-2016 IPR019292 5-methylcytosine restriction system component APT61_RS08150 ef2110ec69f1589d53c081b6d22be22a 278 PANTHER PTHR30244:SF1 2 278 1.6E-113 T 22-04-2016 APT61_RS08150 ef2110ec69f1589d53c081b6d22be22a 278 Gene3D G3DSA:1.20.1330.10 53 234 6.0E-55 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APT61_RS08150 ef2110ec69f1589d53c081b6d22be22a 278 SUPERFAMILY SSF64518 1 278 7.59E-92 T 22-04-2016 APT61_RS08150 ef2110ec69f1589d53c081b6d22be22a 278 PANTHER PTHR30244 2 278 1.6E-113 T 22-04-2016 APT61_RS08150 ef2110ec69f1589d53c081b6d22be22a 278 Pfam PF00669 Bacterial flagellin N-terminal helical region 4 142 6.2E-44 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APT61_RS08150 ef2110ec69f1589d53c081b6d22be22a 278 PRINTS PR00207 Flagellin signature 110 133 1.0E-26 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 APT61_RS08150 ef2110ec69f1589d53c081b6d22be22a 278 PRINTS PR00207 Flagellin signature 75 94 1.0E-26 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 APT61_RS08150 ef2110ec69f1589d53c081b6d22be22a 278 PRINTS PR00207 Flagellin signature 36 53 1.0E-26 T 22-04-2016 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 APT61_RS08150 ef2110ec69f1589d53c081b6d22be22a 278 Pfam PF00700 Bacterial flagellin C-terminal helical region 192 277 1.1E-30 T 22-04-2016 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 APT61_RS07240 6e4a75bd49c64aa6af2612b5ce1d965e 377 SUPERFAMILY SSF103473 5 372 7.32E-20 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS07240 6e4a75bd49c64aa6af2612b5ce1d965e 377 Gene3D G3DSA:1.20.1250.20 9 187 1.7E-6 T 22-04-2016 APT61_RS07240 6e4a75bd49c64aa6af2612b5ce1d965e 377 PANTHER PTHR23537 3 367 1.8E-52 T 22-04-2016 APT61_RS07240 6e4a75bd49c64aa6af2612b5ce1d965e 377 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 13 370 1.5E-87 T 22-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB APT61_RS07240 6e4a75bd49c64aa6af2612b5ce1d965e 377 PANTHER PTHR23537:SF1 3 367 1.8E-52 T 22-04-2016 APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 PANTHER PTHR32176:SF0 8 444 5.9E-270 T 22-04-2016 APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 SUPERFAMILY SSF51658 8 442 6.58E-174 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 Gene3D G3DSA:3.20.20.150 7 443 1.6E-213 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 PRINTS PR00688 Xylose isomerase signature 337 348 7.5E-86 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 PRINTS PR00688 Xylose isomerase signature 211 230 7.5E-86 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 PRINTS PR00688 Xylose isomerase signature 233 257 7.5E-86 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 PRINTS PR00688 Xylose isomerase signature 304 315 7.5E-86 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 PRINTS PR00688 Xylose isomerase signature 96 118 7.5E-86 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 PRINTS PR00688 Xylose isomerase signature 137 157 7.5E-86 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 PRINTS PR00688 Xylose isomerase signature 275 302 7.5E-86 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 PRINTS PR00688 Xylose isomerase signature 160 179 7.5E-86 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 PRINTS PR00688 Xylose isomerase signature 184 205 7.5E-86 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 8 441 3.3E-219 T 22-04-2016 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 PANTHER PTHR32176 8 444 5.9E-270 T 22-04-2016 APT61_RS21405 9c3ab39bb2d211091d9cb4acc9e5a66e 444 Hamap MF_00455 Xylose isomerase [xylA]. 15 441 53.574 T 22-04-2016 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 APT61_RS01760 7159b206a9b8aff6cc6dacebcad732d3 227 Gene3D G3DSA:3.40.50.1000 10 191 7.8E-29 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01760 7159b206a9b8aff6cc6dacebcad732d3 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 1.4E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS01760 7159b206a9b8aff6cc6dacebcad732d3 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 1.4E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS01760 7159b206a9b8aff6cc6dacebcad732d3 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 1.4E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS01760 7159b206a9b8aff6cc6dacebcad732d3 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 1.4E-6 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS01760 7159b206a9b8aff6cc6dacebcad732d3 227 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 7.4E-17 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS01760 7159b206a9b8aff6cc6dacebcad732d3 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 6.1E-10 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01760 7159b206a9b8aff6cc6dacebcad732d3 227 SUPERFAMILY SSF56784 6 214 4.35E-45 T 22-04-2016 IPR023214 HAD-like domain APT61_RS01760 7159b206a9b8aff6cc6dacebcad732d3 227 PANTHER PTHR18901:SF7 1 221 8.2E-136 T 22-04-2016 APT61_RS01760 7159b206a9b8aff6cc6dacebcad732d3 227 PANTHER PTHR18901 1 221 8.2E-136 T 22-04-2016 APT61_RS13525 7e729667ca3b60409db36ccfd2384787 66 Pfam PF08971 Glycogen synthesis protein 7 59 6.4E-20 T 22-04-2016 IPR015065 Surface composition regulator APT61_RS13525 7e729667ca3b60409db36ccfd2384787 66 Gene3D G3DSA:1.20.970.20 8 64 7.3E-23 T 22-04-2016 IPR015065 Surface composition regulator APT61_RS13525 7e729667ca3b60409db36ccfd2384787 66 SUPERFAMILY SSF109747 8 60 5.89E-16 T 22-04-2016 IPR015065 Surface composition regulator APT61_RS13525 7e729667ca3b60409db36ccfd2384787 66 ProDom PD054490 GLYCOGEN GLGS SYNTHESIS BIOSYNTHESIS DEPENDENT BIOSYNTHESIS RPOS 3D-STRUCTURE 6 66 7.0E-9 T 22-04-2016 IPR015065 Surface composition regulator APT61_RS01960 49add429d47a2a273ed7d555518ef0c1 312 Gene3D G3DSA:3.40.190.10 98 185 2.1E-12 T 22-04-2016 APT61_RS01960 49add429d47a2a273ed7d555518ef0c1 312 PANTHER PTHR30346:SF0 7 312 5.5E-57 T 22-04-2016 APT61_RS01960 49add429d47a2a273ed7d555518ef0c1 312 SUPERFAMILY SSF53850 98 303 1.75E-29 T 22-04-2016 APT61_RS01960 49add429d47a2a273ed7d555518ef0c1 312 PANTHER PTHR30346 7 312 5.5E-57 T 22-04-2016 APT61_RS01960 49add429d47a2a273ed7d555518ef0c1 312 SUPERFAMILY SSF46785 9 90 2.27E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01960 49add429d47a2a273ed7d555518ef0c1 312 Gene3D G3DSA:1.10.10.10 9 94 5.7E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01960 49add429d47a2a273ed7d555518ef0c1 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 63 1.0E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS01960 49add429d47a2a273ed7d555518ef0c1 312 Gene3D G3DSA:3.40.190.10 186 271 1.2E-18 T 22-04-2016 APT61_RS01960 49add429d47a2a273ed7d555518ef0c1 312 Pfam PF03466 LysR substrate binding domain 97 296 1.4E-35 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS12270 e10d962c58c03b0118a0f4c7c48fd05f 116 Pfam PF05939 Phage minor tail protein 4 111 1.0E-20 T 22-04-2016 IPR010265 Bacteriophage lambda, GpM, minor tail APT61_RS17655 895c99000fb39fa399156932b3ab5564 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 267 1.5E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS17655 895c99000fb39fa399156932b3ab5564 275 PANTHER PTHR30151 11 275 3.9E-121 T 22-04-2016 APT61_RS17655 895c99000fb39fa399156932b3ab5564 275 Gene3D G3DSA:1.10.3720.10 71 269 2.4E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS17655 895c99000fb39fa399156932b3ab5564 275 PANTHER PTHR30151:SF0 11 275 3.9E-121 T 22-04-2016 APT61_RS17655 895c99000fb39fa399156932b3ab5564 275 SUPERFAMILY SSF161098 75 257 6.54E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS17870 e6acebad833e08572bc8b198b48c5f4e 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 127 9.1E-17 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APT61_RS17870 e6acebad833e08572bc8b198b48c5f4e 133 Gene3D G3DSA:3.10.180.10 5 130 5.6E-29 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS17870 e6acebad833e08572bc8b198b48c5f4e 133 SUPERFAMILY SSF54593 1 131 1.48E-29 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS15650 c8d2a5f5c44213d8f1127e205600d546 295 SUPERFAMILY SSF103481 46 136 2.75E-6 T 22-04-2016 APT61_RS15650 c8d2a5f5c44213d8f1127e205600d546 295 PANTHER PTHR22911:SF37 6 295 2.7E-116 T 22-04-2016 APT61_RS15650 c8d2a5f5c44213d8f1127e205600d546 295 Pfam PF00892 EamA-like transporter family 148 277 1.4E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS15650 c8d2a5f5c44213d8f1127e205600d546 295 PANTHER PTHR22911 6 295 2.7E-116 T 22-04-2016 APT61_RS15650 c8d2a5f5c44213d8f1127e205600d546 295 SUPERFAMILY SSF103481 184 278 1.5E-8 T 22-04-2016 APT61_RS08795 23ee35f920c2eee66872ea9bacfa68f1 283 PANTHER PTHR32502 4 283 1.3E-179 T 22-04-2016 APT61_RS08795 23ee35f920c2eee66872ea9bacfa68f1 283 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 12 281 7.5E-112 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 APT61_RS08795 23ee35f920c2eee66872ea9bacfa68f1 283 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 11 281 2.7E-146 T 22-04-2016 IPR018405 Phosphotransferase system, mannose/fructose/sorbose family IID component, subgroup GO:0009401|GO:0016021 APT61_RS08795 23ee35f920c2eee66872ea9bacfa68f1 283 PANTHER PTHR32502:SF5 4 283 1.3E-179 T 22-04-2016 APT61_RS01235 1756e04566fa1b93f62e971c4fee4f06 252 SUPERFAMILY SSF51735 4 251 5.19E-68 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS01235 1756e04566fa1b93f62e971c4fee4f06 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 1.8E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01235 1756e04566fa1b93f62e971c4fee4f06 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 1.8E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01235 1756e04566fa1b93f62e971c4fee4f06 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 1.8E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01235 1756e04566fa1b93f62e971c4fee4f06 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 2.3E-51 T 22-04-2016 APT61_RS01235 1756e04566fa1b93f62e971c4fee4f06 252 Gene3D G3DSA:3.40.50.720 2 251 4.4E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS01235 1756e04566fa1b93f62e971c4fee4f06 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 6.1E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01235 1756e04566fa1b93f62e971c4fee4f06 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 6.1E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01235 1756e04566fa1b93f62e971c4fee4f06 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 6.1E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01235 1756e04566fa1b93f62e971c4fee4f06 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.1E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01235 1756e04566fa1b93f62e971c4fee4f06 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 6.1E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01235 1756e04566fa1b93f62e971c4fee4f06 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.1E-32 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01235 1756e04566fa1b93f62e971c4fee4f06 252 PANTHER PTHR24322 157 188 3.8E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS01235 1756e04566fa1b93f62e971c4fee4f06 252 PANTHER PTHR24322 8 141 3.8E-41 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS13960 7f87a16ddc9b04dce8834bf418142f1c 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 200 1.4E-66 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APT61_RS13960 7f87a16ddc9b04dce8834bf418142f1c 213 Pfam PF02223 Thymidylate kinase 8 200 6.8E-58 T 22-04-2016 APT61_RS13960 7f87a16ddc9b04dce8834bf418142f1c 213 Hamap MF_00165 Thymidylate kinase [tmk]. 4 208 28.222 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APT61_RS13960 7f87a16ddc9b04dce8834bf418142f1c 213 PANTHER PTHR10344 1 212 4.3E-73 T 22-04-2016 APT61_RS13960 7f87a16ddc9b04dce8834bf418142f1c 213 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 22-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 APT61_RS13960 7f87a16ddc9b04dce8834bf418142f1c 213 SUPERFAMILY SSF52540 1 210 5.34E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13960 7f87a16ddc9b04dce8834bf418142f1c 213 Gene3D G3DSA:3.40.50.300 5 209 3.1E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05040 fd7f0f4a00fc3a2ca68488870b13a17a 314 Pfam PF13391 HNH endonuclease 215 264 9.9E-8 T 22-04-2016 IPR003615 HNH nuclease APT61_RS17280 9fb3eb0fa16f220c61105c2cf830c417 566 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 3.5E-37 T 22-04-2016 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain APT61_RS17280 9fb3eb0fa16f220c61105c2cf830c417 566 PANTHER PTHR30290 120 562 4.9E-283 T 22-04-2016 APT61_RS17280 9fb3eb0fa16f220c61105c2cf830c417 566 PANTHER PTHR30290 22 82 4.9E-283 T 22-04-2016 APT61_RS17280 9fb3eb0fa16f220c61105c2cf830c417 566 SUPERFAMILY SSF53850 116 561 3.08E-57 T 22-04-2016 APT61_RS17280 9fb3eb0fa16f220c61105c2cf830c417 566 PANTHER PTHR30290:SF19 120 562 4.9E-283 T 22-04-2016 APT61_RS17280 9fb3eb0fa16f220c61105c2cf830c417 566 PANTHER PTHR30290:SF19 22 82 4.9E-283 T 22-04-2016 APT61_RS17280 9fb3eb0fa16f220c61105c2cf830c417 566 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 303 8.1E-15 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS17280 9fb3eb0fa16f220c61105c2cf830c417 566 Gene3D G3DSA:3.90.76.10 133 272 1.2E-18 T 22-04-2016 APT61_RS17280 9fb3eb0fa16f220c61105c2cf830c417 566 Gene3D G3DSA:3.10.105.10 416 533 1.6E-4 T 22-04-2016 APT61_RS02215 398a1470e3260473e78862fae84efa9f 315 PANTHER PTHR11138 5 307 4.9E-125 T 22-04-2016 APT61_RS02215 398a1470e3260473e78862fae84efa9f 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.439 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS02215 398a1470e3260473e78862fae84efa9f 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 2.4E-29 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS02215 398a1470e3260473e78862fae84efa9f 315 SUPERFAMILY SSF50486 208 309 3.61E-36 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 APT61_RS02215 398a1470e3260473e78862fae84efa9f 315 Gene3D G3DSA:3.10.25.10 210 307 3.5E-36 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS02215 398a1470e3260473e78862fae84efa9f 315 Pfam PF00551 Formyl transferase 6 183 3.4E-54 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS02215 398a1470e3260473e78862fae84efa9f 315 SUPERFAMILY SSF53328 4 207 1.83E-68 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS02215 398a1470e3260473e78862fae84efa9f 315 Gene3D G3DSA:3.40.50.170 4 208 3.1E-75 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS02215 398a1470e3260473e78862fae84efa9f 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 1.2E-120 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS02215 398a1470e3260473e78862fae84efa9f 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 22-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 APT61_RS06910 482b5d4c558eb2cf79f465f980b2edde 101 PANTHER PTHR35893 1 101 1.1E-65 T 22-04-2016 APT61_RS06910 482b5d4c558eb2cf79f465f980b2edde 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 10 101 1.6E-28 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB APT61_RS06910 482b5d4c558eb2cf79f465f980b2edde 101 PANTHER PTHR35893:SF1 1 101 1.1E-65 T 22-04-2016 APT61_RS07255 d66df4439817ec27922945ea16309288 341 SMART SM00354 1 71 8.4E-35 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS07255 d66df4439817ec27922945ea16309288 341 Pfam PF13377 Periplasmic binding protein-like domain 169 329 1.6E-34 T 22-04-2016 APT61_RS07255 d66df4439817ec27922945ea16309288 341 Gene3D G3DSA:3.40.50.2300 58 166 3.2E-48 T 22-04-2016 APT61_RS07255 d66df4439817ec27922945ea16309288 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS07255 d66df4439817ec27922945ea16309288 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-20 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS07255 d66df4439817ec27922945ea16309288 341 PANTHER PTHR30146:SF55 1 333 8.8E-204 T 22-04-2016 APT61_RS07255 d66df4439817ec27922945ea16309288 341 SUPERFAMILY SSF47413 1 59 4.93E-19 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS07255 d66df4439817ec27922945ea16309288 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.4E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS07255 d66df4439817ec27922945ea16309288 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.4E-7 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS07255 d66df4439817ec27922945ea16309288 341 SUPERFAMILY SSF53822 61 330 5.1E-79 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS07255 d66df4439817ec27922945ea16309288 341 Gene3D G3DSA:1.10.260.40 2 57 5.6E-27 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS07255 d66df4439817ec27922945ea16309288 341 Gene3D G3DSA:3.40.50.2300 167 330 3.4E-49 T 22-04-2016 APT61_RS07255 d66df4439817ec27922945ea16309288 341 PANTHER PTHR30146 1 333 8.8E-204 T 22-04-2016 APT61_RS19070 d84843c3e8b8a28ba2b932215dd299af 228 PANTHER PTHR12029 3 180 9.9E-90 T 22-04-2016 APT61_RS19070 d84843c3e8b8a28ba2b932215dd299af 228 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 2 225 1.8E-69 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APT61_RS19070 d84843c3e8b8a28ba2b932215dd299af 228 PANTHER PTHR12029:SF54 3 180 9.9E-90 T 22-04-2016 APT61_RS19070 d84843c3e8b8a28ba2b932215dd299af 228 PIRSF PIRSF004808 1 228 1.0E-60 T 22-04-2016 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APT61_RS19070 d84843c3e8b8a28ba2b932215dd299af 228 Pfam PF00588 SpoU rRNA Methylase family 3 153 3.2E-32 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APT61_RS19070 d84843c3e8b8a28ba2b932215dd299af 228 SUPERFAMILY SSF75217 2 156 5.23E-32 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APT61_RS19070 d84843c3e8b8a28ba2b932215dd299af 228 Gene3D G3DSA:3.40.1280.10 3 159 1.6E-29 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT61_RS10635 20bdeac805fbcd44142bbaa3a2bfae5b 76 ProDom PD057831 YNCJ PRECURSOR SIGNAL PERIPLASMIC STY1461 1 76 3.0E-34 T 22-04-2016 IPR020117 Uncharacterised protein family YncJ APT61_RS10635 20bdeac805fbcd44142bbaa3a2bfae5b 76 Pfam PF10829 Protein of unknown function (DUF2554) 1 76 3.3E-49 T 22-04-2016 IPR020117 Uncharacterised protein family YncJ APT61_RS07335 536fec66f55f836607597c4c79c0c7bc 186 PANTHER PTHR30353:SF8 1 185 4.5E-100 T 22-04-2016 APT61_RS07335 536fec66f55f836607597c4c79c0c7bc 186 PANTHER PTHR30353 1 185 4.5E-100 T 22-04-2016 IPR032818 DedA family APT61_RS07335 536fec66f55f836607597c4c79c0c7bc 186 Pfam PF09335 SNARE associated Golgi protein 23 143 5.5E-17 T 22-04-2016 IPR032816 SNARE associated Golgi protein APT61_RS20590 a0b61ab96000e7b19075b019d020f53c 403 Pfam PF13440 Polysaccharide biosynthesis protein 105 311 8.8E-5 T 22-04-2016 APT61_RS12780 de9fafac4534f915e60f1ec7e48403fa 379 Gene3D G3DSA:3.10.450.50 241 373 1.3E-20 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS12780 de9fafac4534f915e60f1ec7e48403fa 379 Gene3D G3DSA:3.10.450.50 63 192 7.2E-9 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS12780 de9fafac4534f915e60f1ec7e48403fa 379 SUPERFAMILY SSF54427 238 371 4.73E-27 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS12780 de9fafac4534f915e60f1ec7e48403fa 379 Pfam PF07366 SnoaL-like polyketide cyclase 242 371 4.7E-17 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain APT61_RS12780 de9fafac4534f915e60f1ec7e48403fa 379 Pfam PF07366 SnoaL-like polyketide cyclase 63 189 5.6E-7 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain APT61_RS12780 de9fafac4534f915e60f1ec7e48403fa 379 SUPERFAMILY SSF54427 56 198 9.76E-24 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS06985 c386360b36bb620f196650d9123e659f 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 APT61_RS06985 c386360b36bb620f196650d9123e659f 376 SUPERFAMILY SSF47240 3 340 7.87E-116 T 22-04-2016 IPR009078 Ferritin-like superfamily APT61_RS06985 c386360b36bb620f196650d9123e659f 376 PANTHER PTHR23409:SF23 197 376 1.6E-277 T 22-04-2016 APT61_RS06985 c386360b36bb620f196650d9123e659f 376 PANTHER PTHR23409:SF23 1 173 1.6E-277 T 22-04-2016 APT61_RS06985 c386360b36bb620f196650d9123e659f 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 1.3E-48 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APT61_RS06985 c386360b36bb620f196650d9123e659f 376 Gene3D G3DSA:1.10.620.20 3 340 7.2E-127 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 APT61_RS06985 c386360b36bb620f196650d9123e659f 376 PANTHER PTHR23409 197 376 1.6E-277 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APT61_RS06985 c386360b36bb620f196650d9123e659f 376 PANTHER PTHR23409 1 173 1.6E-277 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 APT61_RS03565 823fc55f88b5d014935aef0da0cc9d02 244 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 99 116 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site APT61_RS03565 823fc55f88b5d014935aef0da0cc9d02 244 PANTHER PTHR30251:SF5 10 232 1.5E-100 T 22-04-2016 APT61_RS03565 823fc55f88b5d014935aef0da0cc9d02 244 Gene3D G3DSA:2.60.40.1070 152 231 5.1E-20 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APT61_RS03565 823fc55f88b5d014935aef0da0cc9d02 244 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 166 222 2.7E-11 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APT61_RS03565 823fc55f88b5d014935aef0da0cc9d02 244 PRINTS PR00969 Pili chaperone signature 160 175 1.4E-26 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APT61_RS03565 823fc55f88b5d014935aef0da0cc9d02 244 PRINTS PR00969 Pili chaperone signature 24 33 1.4E-26 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APT61_RS03565 823fc55f88b5d014935aef0da0cc9d02 244 PRINTS PR00969 Pili chaperone signature 100 117 1.4E-26 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APT61_RS03565 823fc55f88b5d014935aef0da0cc9d02 244 PRINTS PR00969 Pili chaperone signature 70 91 1.4E-26 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APT61_RS03565 823fc55f88b5d014935aef0da0cc9d02 244 PRINTS PR00969 Pili chaperone signature 123 138 1.4E-26 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APT61_RS03565 823fc55f88b5d014935aef0da0cc9d02 244 Gene3D G3DSA:2.60.40.360 24 141 1.3E-41 T 22-04-2016 IPR008962 PapD-like APT61_RS03565 823fc55f88b5d014935aef0da0cc9d02 244 PANTHER PTHR30251 10 232 1.5E-100 T 22-04-2016 APT61_RS03565 823fc55f88b5d014935aef0da0cc9d02 244 SUPERFAMILY SSF49354 24 141 2.41E-35 T 22-04-2016 IPR008962 PapD-like APT61_RS03565 823fc55f88b5d014935aef0da0cc9d02 244 SUPERFAMILY SSF49584 152 231 3.92E-16 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APT61_RS03565 823fc55f88b5d014935aef0da0cc9d02 244 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 141 2.5E-35 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 APT61_RS20165 0a3d64eabb6b32faa624e9a706727ca4 321 PANTHER PTHR12715 1 314 9.2E-172 T 22-04-2016 APT61_RS20165 0a3d64eabb6b32faa624e9a706727ca4 321 SUPERFAMILY SSF103481 43 134 1.83E-9 T 22-04-2016 APT61_RS20165 0a3d64eabb6b32faa624e9a706727ca4 321 PANTHER PTHR12715:SF21 1 314 9.2E-172 T 22-04-2016 APT61_RS20165 0a3d64eabb6b32faa624e9a706727ca4 321 Pfam PF00892 EamA-like transporter family 3 134 1.3E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS16450 22475b734aebc264208cfb6168b68345 321 Gene3D G3DSA:3.20.20.70 55 312 1.9E-71 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS16450 22475b734aebc264208cfb6168b68345 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 157.194 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APT61_RS16450 22475b734aebc264208cfb6168b68345 321 PANTHER PTHR10949 4 321 4.9E-183 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APT61_RS16450 22475b734aebc264208cfb6168b68345 321 SMART SM00729 84 293 1.9E-14 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APT61_RS16450 22475b734aebc264208cfb6168b68345 321 SUPERFAMILY SSF102114 53 317 9.16E-68 T 22-04-2016 APT61_RS16450 22475b734aebc264208cfb6168b68345 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 1.8E-6 T 22-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APT61_RS16450 22475b734aebc264208cfb6168b68345 321 PIRSF PIRSF005963 2 321 2.3E-132 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APT61_RS16450 22475b734aebc264208cfb6168b68345 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 3.2E-162 T 22-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 APT61_RS16450 22475b734aebc264208cfb6168b68345 321 Pfam PF04055 Radical SAM superfamily 91 251 2.5E-14 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS21280 1d66f865ffe4a1ab83214491efb696e1 535 Gene3D G3DSA:3.90.76.10 39 219 2.1E-49 T 22-04-2016 APT61_RS21280 1d66f865ffe4a1ab83214491efb696e1 535 PIRSF PIRSF002741 22 535 1.2E-120 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APT61_RS21280 1d66f865ffe4a1ab83214491efb696e1 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 2.4E-107 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS21280 1d66f865ffe4a1ab83214491efb696e1 535 PANTHER PTHR30290:SF14 1 535 2.7E-229 T 22-04-2016 APT61_RS21280 1d66f865ffe4a1ab83214491efb696e1 535 Gene3D G3DSA:3.10.105.10 290 504 4.2E-70 T 22-04-2016 APT61_RS21280 1d66f865ffe4a1ab83214491efb696e1 535 PANTHER PTHR30290 1 535 2.7E-229 T 22-04-2016 APT61_RS21280 1d66f865ffe4a1ab83214491efb696e1 535 SUPERFAMILY SSF53850 29 534 3.08E-162 T 22-04-2016 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 ProSitePatterns PS00543 HlyD family secretion proteins signature. 418 440 - T 22-04-2016 IPR006144 Secretion protein HlyD, conserved site GO:0008565|GO:0009306|GO:0016020 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 Pfam PF13533 Biotin-lipoyl like 87 116 1.6E-5 T 22-04-2016 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 375 398 2.7E-44 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 418 433 2.7E-44 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 433 453 2.7E-44 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 48 71 2.7E-44 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 90 110 2.7E-44 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 351 375 2.7E-44 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 318 339 2.7E-44 T 22-04-2016 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 SUPERFAMILY SSF111369 82 140 1.29E-5 T 22-04-2016 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 PANTHER PTHR30386:SF4 165 454 4.8E-131 T 22-04-2016 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 PANTHER PTHR30386:SF4 8 133 4.8E-131 T 22-04-2016 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 Gene3D G3DSA:2.40.50.100 303 337 5.2E-16 T 22-04-2016 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 Gene3D G3DSA:2.40.50.100 81 112 5.2E-16 T 22-04-2016 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 38 454 5.6E-131 T 22-04-2016 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 PANTHER PTHR30386 165 454 4.8E-131 T 22-04-2016 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 PANTHER PTHR30386 8 133 4.8E-131 T 22-04-2016 APT61_RS06560 64999a97297dfa9f0c89ed15e0e012bc 454 Pfam PF13437 HlyD family secretion protein 306 416 2.7E-19 T 22-04-2016 APT61_RS02680 da6c8cd56564e8e35a17ca63aac83c10 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 4.9E-105 T 22-04-2016 IPR003453 ABC transport permease subunit MlaE, Proteobacteria APT61_RS02680 da6c8cd56564e8e35a17ca63aac83c10 260 PANTHER PTHR30188 1 259 1.0E-123 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APT61_RS02680 da6c8cd56564e8e35a17ca63aac83c10 260 PANTHER PTHR30188:SF4 1 259 1.0E-123 T 22-04-2016 APT61_RS02680 da6c8cd56564e8e35a17ca63aac83c10 260 Pfam PF02405 Permease MlaE 44 256 1.0E-72 T 22-04-2016 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 APT61_RS17820 397bbb293d4a8328429be9c5c91eb10c 460 PANTHER PTHR23511 7 436 5.0E-85 T 22-04-2016 APT61_RS17820 397bbb293d4a8328429be9c5c91eb10c 460 Pfam PF00083 Sugar (and other) transporter 52 436 1.2E-54 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APT61_RS17820 397bbb293d4a8328429be9c5c91eb10c 460 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS17820 397bbb293d4a8328429be9c5c91eb10c 460 SUPERFAMILY SSF103473 6 436 2.88E-73 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS17820 397bbb293d4a8328429be9c5c91eb10c 460 Gene3D G3DSA:1.20.1250.20 25 201 1.2E-22 T 22-04-2016 APT61_RS17820 397bbb293d4a8328429be9c5c91eb10c 460 Gene3D G3DSA:1.20.1250.20 249 435 1.2E-20 T 22-04-2016 APT61_RS04785 fd29dfa86d4fe7924deb19c436552d8e 345 SUPERFAMILY SSF81345 13 341 1.83E-76 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS04785 fd29dfa86d4fe7924deb19c436552d8e 345 Gene3D G3DSA:1.10.3470.10 19 344 2.3E-100 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS04785 fd29dfa86d4fe7924deb19c436552d8e 345 PANTHER PTHR30472 19 345 8.0E-95 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS04785 fd29dfa86d4fe7924deb19c436552d8e 345 Pfam PF01032 FecCD transport family 25 341 3.8E-88 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS14390 a92618f8d8cc8be5248185a0dddc6f7c 230 PANTHER PTHR11080 1 221 1.0E-87 T 22-04-2016 APT61_RS14390 a92618f8d8cc8be5248185a0dddc6f7c 230 Pfam PF00857 Isochorismatase family 18 215 6.9E-40 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS14390 a92618f8d8cc8be5248185a0dddc6f7c 230 Hamap MF_00830 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB [rutB]. 1 228 61.095 T 22-04-2016 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 APT61_RS14390 a92618f8d8cc8be5248185a0dddc6f7c 230 PANTHER PTHR11080:SF19 1 221 1.0E-87 T 22-04-2016 APT61_RS14390 a92618f8d8cc8be5248185a0dddc6f7c 230 SUPERFAMILY SSF52499 4 221 9.03E-57 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS14390 a92618f8d8cc8be5248185a0dddc6f7c 230 Gene3D G3DSA:3.40.50.850 4 224 8.5E-65 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS14390 a92618f8d8cc8be5248185a0dddc6f7c 230 TIGRFAM TIGR03614 RutB: pyrimidine utilization protein B 3 224 3.7E-134 T 22-04-2016 IPR019916 Isochorismatase, RutB GO:0016811 KEGG: 00240+3.5.1.110|KEGG: 00311+3.5.1.11 APT61_RS18985 1391ac3648b20d6bc55efbeed6a72214 299 Pfam PF03466 LysR substrate binding domain 96 284 1.5E-10 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS18985 1391ac3648b20d6bc55efbeed6a72214 299 PANTHER PTHR30293 2 296 4.6E-222 T 22-04-2016 APT61_RS18985 1391ac3648b20d6bc55efbeed6a72214 299 SUPERFAMILY SSF46785 2 85 2.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18985 1391ac3648b20d6bc55efbeed6a72214 299 Gene3D G3DSA:3.40.190.10 97 227 1.1E-6 T 22-04-2016 APT61_RS18985 1391ac3648b20d6bc55efbeed6a72214 299 Gene3D G3DSA:1.10.10.10 3 83 9.8E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18985 1391ac3648b20d6bc55efbeed6a72214 299 PANTHER PTHR30293:SF2 2 296 4.6E-222 T 22-04-2016 APT61_RS18985 1391ac3648b20d6bc55efbeed6a72214 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.0E-15 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS18985 1391ac3648b20d6bc55efbeed6a72214 299 SUPERFAMILY SSF53850 90 287 1.49E-25 T 22-04-2016 APT61_RS15470 9eb0e860de616618aa137d5ff1cfdea8 336 Gene3D G3DSA:3.40.50.10490 21 160 1.2E-20 T 22-04-2016 APT61_RS15470 9eb0e860de616618aa137d5ff1cfdea8 336 SUPERFAMILY SSF53697 19 335 5.24E-51 T 22-04-2016 APT61_RS15470 9eb0e860de616618aa137d5ff1cfdea8 336 PANTHER PTHR10937 17 335 6.6E-139 T 22-04-2016 APT61_RS15470 9eb0e860de616618aa137d5ff1cfdea8 336 PANTHER PTHR10937:SF7 17 335 6.6E-139 T 22-04-2016 APT61_RS15470 9eb0e860de616618aa137d5ff1cfdea8 336 Gene3D G3DSA:3.40.50.10490 165 259 5.1E-6 T 22-04-2016 APT61_RS15470 9eb0e860de616618aa137d5ff1cfdea8 336 Pfam PF01380 SIS domain 58 135 2.9E-13 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 APT61_RS15470 9eb0e860de616618aa137d5ff1cfdea8 336 PIRSF PIRSF009290 1 336 5.4E-101 T 22-04-2016 IPR024713 Fructosamine deglycase FrlB APT61_RS19175 45c32bf1936ed0a48466d0d3bddcd685 356 PANTHER PTHR14226 1 356 1.7E-146 T 22-04-2016 APT61_RS19175 45c32bf1936ed0a48466d0d3bddcd685 356 SUPERFAMILY SSF52151 22 279 2.25E-41 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 APT61_RS19175 45c32bf1936ed0a48466d0d3bddcd685 356 Pfam PF01734 Patatin-like phospholipase 27 195 1.5E-19 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 APT61_RS19175 45c32bf1936ed0a48466d0d3bddcd685 356 PANTHER PTHR14226:SF25 1 356 1.7E-146 T 22-04-2016 APT61_RS19175 45c32bf1936ed0a48466d0d3bddcd685 356 Gene3D G3DSA:3.40.1090.10 27 195 4.3E-6 T 22-04-2016 APT61_RS21275 b1ee667271a589eab7439aefdeac6248 339 PANTHER PTHR30465:SF0 194 337 1.0E-154 T 22-04-2016 APT61_RS21275 b1ee667271a589eab7439aefdeac6248 339 PANTHER PTHR30465:SF0 1 169 1.0E-154 T 22-04-2016 APT61_RS21275 b1ee667271a589eab7439aefdeac6248 339 SUPERFAMILY SSF161098 89 160 3.11E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS21275 b1ee667271a589eab7439aefdeac6248 339 SUPERFAMILY SSF161098 200 322 3.11E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS21275 b1ee667271a589eab7439aefdeac6248 339 PANTHER PTHR30465 194 337 1.0E-154 T 22-04-2016 APT61_RS21275 b1ee667271a589eab7439aefdeac6248 339 PANTHER PTHR30465 1 169 1.0E-154 T 22-04-2016 APT61_RS21275 b1ee667271a589eab7439aefdeac6248 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 7.2E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS21275 b1ee667271a589eab7439aefdeac6248 339 Gene3D G3DSA:1.10.3720.10 86 160 1.3E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS21275 b1ee667271a589eab7439aefdeac6248 339 Gene3D G3DSA:1.10.3720.10 192 332 1.3E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS18415 21a4e73eb4d591ebacd7fb2e4f4d83f9 256 Pfam PF01061 ABC-2 type transporter 9 218 4.0E-38 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 APT61_RS18415 21a4e73eb4d591ebacd7fb2e4f4d83f9 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.8E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APT61_RS18415 21a4e73eb4d591ebacd7fb2e4f4d83f9 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 1.8E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APT61_RS18415 21a4e73eb4d591ebacd7fb2e4f4d83f9 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.8E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APT61_RS18415 21a4e73eb4d591ebacd7fb2e4f4d83f9 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.8E-7 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APT61_RS18415 21a4e73eb4d591ebacd7fb2e4f4d83f9 256 PIRSF PIRSF006648 11 252 3.7E-20 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APT61_RS09895 03d1e284786ea82aeb513a87d86a643c 180 PANTHER PTHR37625:SF1 14 179 2.3E-53 T 22-04-2016 APT61_RS09895 03d1e284786ea82aeb513a87d86a643c 180 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 13 158 4.0E-27 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN APT61_RS09895 03d1e284786ea82aeb513a87d86a643c 180 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 22 168 1.2E-37 T 22-04-2016 IPR017734 Type VI secretion system, lipoprotein SciN APT61_RS09895 03d1e284786ea82aeb513a87d86a643c 180 PANTHER PTHR37625 14 179 2.3E-53 T 22-04-2016 APT61_RS07150 82916a046b3cca35b2d57001baac666b 189 PANTHER PTHR21666 69 186 4.7E-85 T 22-04-2016 APT61_RS07150 82916a046b3cca35b2d57001baac666b 189 PANTHER PTHR21666:SF210 69 186 4.7E-85 T 22-04-2016 APT61_RS07150 82916a046b3cca35b2d57001baac666b 189 Pfam PF00877 NlpC/P60 family 80 184 3.6E-34 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS07150 82916a046b3cca35b2d57001baac666b 189 SUPERFAMILY SSF54001 69 186 9.22E-41 T 22-04-2016 APT61_RS07150 82916a046b3cca35b2d57001baac666b 189 Gene3D G3DSA:3.90.1720.10 69 187 4.2E-45 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- APT61_RS16495 5f79d86e470e09e126b19561425c97d1 136 PANTHER PTHR30437:SF5 1 134 1.3E-69 T 22-04-2016 APT61_RS16495 5f79d86e470e09e126b19561425c97d1 136 Gene3D G3DSA:3.10.50.30 46 136 1.9E-28 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APT61_RS16495 5f79d86e470e09e126b19561425c97d1 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 123 2.2E-19 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APT61_RS16495 5f79d86e470e09e126b19561425c97d1 136 Gene3D G3DSA:1.10.286.20 1 44 1.6E-20 T 22-04-2016 APT61_RS16495 5f79d86e470e09e126b19561425c97d1 136 PANTHER PTHR30437 1 134 1.3E-69 T 22-04-2016 APT61_RS16495 5f79d86e470e09e126b19561425c97d1 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 42.438 T 22-04-2016 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 APT61_RS16495 5f79d86e470e09e126b19561425c97d1 136 Pfam PF14760 Rnk N-terminus 4 42 1.6E-11 T 22-04-2016 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain APT61_RS16495 5f79d86e470e09e126b19561425c97d1 136 SUPERFAMILY SSF54534 49 125 1.57E-17 T 22-04-2016 APT61_RS07745 94df1e834973387f76d0dfeddf5cb8c3 406 Pfam PF13439 Glycosyltransferase Family 4 15 210 9.8E-8 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT61_RS07745 94df1e834973387f76d0dfeddf5cb8c3 406 SUPERFAMILY SSF53756 94 405 8.52E-60 T 22-04-2016 APT61_RS07745 94df1e834973387f76d0dfeddf5cb8c3 406 SUPERFAMILY SSF53756 14 53 8.52E-60 T 22-04-2016 APT61_RS07745 94df1e834973387f76d0dfeddf5cb8c3 406 PANTHER PTHR12526 1 39 4.2E-79 T 22-04-2016 APT61_RS07745 94df1e834973387f76d0dfeddf5cb8c3 406 PANTHER PTHR12526 56 406 4.2E-79 T 22-04-2016 APT61_RS07745 94df1e834973387f76d0dfeddf5cb8c3 406 TIGRFAM TIGR04005 wcaL: colanic acid biosynthesis glycosyltransferase WcaL 1 406 1.2E-250 T 22-04-2016 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL KEGG: 00540+2.4.-.-|UniPathway: UPA00936 APT61_RS07745 94df1e834973387f76d0dfeddf5cb8c3 406 Gene3D G3DSA:3.40.50.2000 218 371 1.1E-24 T 22-04-2016 APT61_RS07745 94df1e834973387f76d0dfeddf5cb8c3 406 Pfam PF00534 Glycosyl transferases group 1 217 368 6.6E-39 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APT61_RS07745 94df1e834973387f76d0dfeddf5cb8c3 406 PANTHER PTHR12526:SF374 1 39 4.2E-79 T 22-04-2016 APT61_RS07745 94df1e834973387f76d0dfeddf5cb8c3 406 PANTHER PTHR12526:SF374 56 406 4.2E-79 T 22-04-2016 APT61_RS05025 85d6d9f47396af060db6ac6d91433818 151 PANTHER PTHR30302 1 139 3.0E-57 T 22-04-2016 APT61_RS05025 85d6d9f47396af060db6ac6d91433818 151 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 3 141 1.2E-60 T 22-04-2016 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 APT61_RS05025 85d6d9f47396af060db6ac6d91433818 151 SUPERFAMILY SSF53163 4 141 2.62E-34 T 22-04-2016 IPR023430 Peptidase HybD-like domain APT61_RS05025 85d6d9f47396af060db6ac6d91433818 151 PANTHER PTHR30302:SF4 1 139 3.0E-57 T 22-04-2016 APT61_RS05025 85d6d9f47396af060db6ac6d91433818 151 PRINTS PR00446 Hydrogen uptake protein signature 15 26 4.3E-11 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APT61_RS05025 85d6d9f47396af060db6ac6d91433818 151 PRINTS PR00446 Hydrogen uptake protein signature 56 66 4.3E-11 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APT61_RS05025 85d6d9f47396af060db6ac6d91433818 151 PRINTS PR00446 Hydrogen uptake protein signature 67 83 4.3E-11 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APT61_RS05025 85d6d9f47396af060db6ac6d91433818 151 PRINTS PR00446 Hydrogen uptake protein signature 3 15 4.3E-11 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APT61_RS05025 85d6d9f47396af060db6ac6d91433818 151 PRINTS PR00446 Hydrogen uptake protein signature 33 50 4.3E-11 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APT61_RS05025 85d6d9f47396af060db6ac6d91433818 151 Pfam PF01750 Hydrogenase maturation protease 29 140 2.1E-27 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APT61_RS05025 85d6d9f47396af060db6ac6d91433818 151 Gene3D G3DSA:3.40.50.1450 5 140 3.8E-24 T 22-04-2016 IPR023430 Peptidase HybD-like domain APT61_RS05025 85d6d9f47396af060db6ac6d91433818 151 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 140 6.2E-35 T 22-04-2016 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 APT61_RS02155 da8cbe33a0baceca6b15a79a5be0f043 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 7.8E-32 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P APT61_RS02155 da8cbe33a0baceca6b15a79a5be0f043 144 PANTHER PTHR12934 1 144 1.2E-73 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APT61_RS02155 da8cbe33a0baceca6b15a79a5be0f043 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 9.1E-51 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 APT61_RS02155 da8cbe33a0baceca6b15a79a5be0f043 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.392 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 APT61_RS02155 da8cbe33a0baceca6b15a79a5be0f043 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 22-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02155 da8cbe33a0baceca6b15a79a5be0f043 144 SUPERFAMILY SSF52080 4 143 3.4E-46 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P APT61_RS02155 da8cbe33a0baceca6b15a79a5be0f043 144 Gene3D G3DSA:3.100.10.10 32 143 1.2E-26 T 22-04-2016 APT61_RS03850 97540ed2795a8f5bea3abb3978da8b43 967 Gene3D G3DSA:2.40.128.130 680 967 9.8E-60 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS03850 97540ed2795a8f5bea3abb3978da8b43 967 Pfam PF03797 Autotransporter beta-domain 687 955 5.8E-53 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS03850 97540ed2795a8f5bea3abb3978da8b43 967 SMART SM00869 687 957 6.8E-52 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS03850 97540ed2795a8f5bea3abb3978da8b43 967 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 580 967 9.7E-28 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 APT61_RS03850 97540ed2795a8f5bea3abb3978da8b43 967 SUPERFAMILY SSF103515 656 967 4.58E-56 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS09405 ace12039b7dcae12e705877cfb3e1fa2 306 SUPERFAMILY SSF161098 89 290 2.78E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09405 ace12039b7dcae12e705877cfb3e1fa2 306 PANTHER PTHR30465 1 306 8.9E-165 T 22-04-2016 APT61_RS09405 ace12039b7dcae12e705877cfb3e1fa2 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.2E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09405 ace12039b7dcae12e705877cfb3e1fa2 306 Gene3D G3DSA:1.10.3720.10 88 302 7.9E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS09405 ace12039b7dcae12e705877cfb3e1fa2 306 PANTHER PTHR30465:SF74 1 306 8.9E-165 T 22-04-2016 APT61_RS10655 d410f9354af3b4a7ff0a4d779da03126 160 PANTHER PTHR34319:SF2 1 160 6.0E-95 T 22-04-2016 APT61_RS10655 d410f9354af3b4a7ff0a4d779da03126 160 SUPERFAMILY SSF141452 2 159 6.67E-41 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS10655 d410f9354af3b4a7ff0a4d779da03126 160 Gene3D G3DSA:2.30.110.20 1 150 2.3E-29 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS10655 d410f9354af3b4a7ff0a4d779da03126 160 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 2.4E-33 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS10655 d410f9354af3b4a7ff0a4d779da03126 160 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 159 1.5E-46 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS10655 d410f9354af3b4a7ff0a4d779da03126 160 PANTHER PTHR34319 1 160 6.0E-95 T 22-04-2016 APT61_RS11710 75f34e34c0f539e67891587a9f6633f4 459 SUPERFAMILY SSF103473 10 435 7.19E-61 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11710 75f34e34c0f539e67891587a9f6633f4 459 Pfam PF07690 Major Facilitator Superfamily 21 351 7.5E-29 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS11710 75f34e34c0f539e67891587a9f6633f4 459 Gene3D G3DSA:1.20.1250.20 242 432 4.7E-19 T 22-04-2016 APT61_RS11710 75f34e34c0f539e67891587a9f6633f4 459 Gene3D G3DSA:1.20.1250.20 21 220 5.0E-24 T 22-04-2016 APT61_RS11710 75f34e34c0f539e67891587a9f6633f4 459 PANTHER PTHR23508 1 451 0.0 T 22-04-2016 APT61_RS11710 75f34e34c0f539e67891587a9f6633f4 459 PANTHER PTHR23508:SF6 1 451 0.0 T 22-04-2016 APT61_RS21425 7e985c9f54ea850abac0cff1083e84d0 392 SUPERFAMILY SSF53822 10 298 2.03E-43 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS21425 7e985c9f54ea850abac0cff1083e84d0 392 SMART SM00342 301 384 8.9E-31 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS21425 7e985c9f54ea850abac0cff1083e84d0 392 SUPERFAMILY SSF46689 338 387 5.73E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS21425 7e985c9f54ea850abac0cff1083e84d0 392 PANTHER PTHR30146 8 320 1.6E-174 T 22-04-2016 APT61_RS21425 7e985c9f54ea850abac0cff1083e84d0 392 Gene3D G3DSA:1.10.10.60 282 335 1.9E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS21425 7e985c9f54ea850abac0cff1083e84d0 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 353 368 1.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS21425 7e985c9f54ea850abac0cff1083e84d0 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 368 384 1.3E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS21425 7e985c9f54ea850abac0cff1083e84d0 392 Gene3D G3DSA:3.40.50.2300 96 277 8.3E-28 T 22-04-2016 APT61_RS21425 7e985c9f54ea850abac0cff1083e84d0 392 PANTHER PTHR30146:SF24 8 320 1.6E-174 T 22-04-2016 APT61_RS21425 7e985c9f54ea850abac0cff1083e84d0 392 SUPERFAMILY SSF46689 284 332 1.37E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS21425 7e985c9f54ea850abac0cff1083e84d0 392 Pfam PF12833 Helix-turn-helix domain 309 386 1.1E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS21425 7e985c9f54ea850abac0cff1083e84d0 392 Pfam PF13377 Periplasmic binding protein-like domain 113 277 5.9E-36 T 22-04-2016 APT61_RS21425 7e985c9f54ea850abac0cff1083e84d0 392 Gene3D G3DSA:1.10.10.60 338 387 5.0E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS21425 7e985c9f54ea850abac0cff1083e84d0 392 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 338 380 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS01295 49ce9b36d7686acf4f096cdc49737457 111 Pfam PF10625 Universal stress protein B (UspB) 1 106 7.0E-54 T 22-04-2016 IPR019598 Universal stress protein B APT61_RS01295 49ce9b36d7686acf4f096cdc49737457 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 38.974 T 22-04-2016 IPR019598 Universal stress protein B APT61_RS14060 d7db66ef8b767aaee36060253a8533f7 232 PRINTS PR01008 Flagellar L-ring protein signature 209 223 2.6E-36 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APT61_RS14060 d7db66ef8b767aaee36060253a8533f7 232 PRINTS PR01008 Flagellar L-ring protein signature 146 161 2.6E-36 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APT61_RS14060 d7db66ef8b767aaee36060253a8533f7 232 PRINTS PR01008 Flagellar L-ring protein signature 193 207 2.6E-36 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APT61_RS14060 d7db66ef8b767aaee36060253a8533f7 232 PRINTS PR01008 Flagellar L-ring protein signature 73 85 2.6E-36 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APT61_RS14060 d7db66ef8b767aaee36060253a8533f7 232 PRINTS PR01008 Flagellar L-ring protein signature 172 188 2.6E-36 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APT61_RS14060 d7db66ef8b767aaee36060253a8533f7 232 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 230 28.188 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APT61_RS14060 d7db66ef8b767aaee36060253a8533f7 232 Pfam PF02107 Flagellar L-ring protein 47 231 7.6E-61 T 22-04-2016 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 APT61_RS14060 d7db66ef8b767aaee36060253a8533f7 232 PANTHER PTHR34933 1 232 1.5E-83 T 22-04-2016 APT61_RS14060 d7db66ef8b767aaee36060253a8533f7 232 PANTHER PTHR34933:SF1 1 232 1.5E-83 T 22-04-2016 APT61_RS14175 0b08f8d75afd72fa66ac596d4eb8a94c 308 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 299 7.4E-109 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APT61_RS14175 0b08f8d75afd72fa66ac596d4eb8a94c 308 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 308 3.9E-143 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 APT61_RS14175 0b08f8d75afd72fa66ac596d4eb8a94c 308 PIRSF PIRSF026649 2 308 8.2E-103 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APT61_RS14175 0b08f8d75afd72fa66ac596d4eb8a94c 308 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 308 50.435 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 APT61_RS14175 0b08f8d75afd72fa66ac596d4eb8a94c 308 PANTHER PTHR30606 2 308 1.4E-173 T 22-04-2016 APT61_RS14175 0b08f8d75afd72fa66ac596d4eb8a94c 308 PANTHER PTHR30606:SF5 2 308 1.4E-173 T 22-04-2016 APT61_RS05010 be40347523ff1b734aefdc266b97b905 181 PANTHER PTHR10849:SF11 1 137 1.0E-69 T 22-04-2016 APT61_RS05010 be40347523ff1b734aefdc266b97b905 181 SUPERFAMILY SSF54862 18 110 1.13E-22 T 22-04-2016 APT61_RS05010 be40347523ff1b734aefdc266b97b905 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS05010 be40347523ff1b734aefdc266b97b905 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS05010 be40347523ff1b734aefdc266b97b905 181 Gene3D G3DSA:3.30.70.20 3 93 2.0E-21 T 22-04-2016 APT61_RS05010 be40347523ff1b734aefdc266b97b905 181 Pfam PF12838 4Fe-4S dicluster domain 39 89 6.8E-13 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS05010 be40347523ff1b734aefdc266b97b905 181 PANTHER PTHR10849 1 137 1.0E-69 T 22-04-2016 APT61_RS11765 262fb51ed32088e7e093397e9aea8d9c 599 Gene3D G3DSA:3.90.1300.10 6 453 4.2E-105 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS11765 262fb51ed32088e7e093397e9aea8d9c 599 Gene3D G3DSA:3.10.490.10 479 542 7.0E-4 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like APT61_RS11765 262fb51ed32088e7e093397e9aea8d9c 599 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 43 596 3.8E-229 T 22-04-2016 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 APT61_RS11765 262fb51ed32088e7e093397e9aea8d9c 599 SUPERFAMILY SSF75304 5 453 3.01E-109 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS11765 262fb51ed32088e7e093397e9aea8d9c 599 PANTHER PTHR11895 6 458 5.2E-153 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS11765 262fb51ed32088e7e093397e9aea8d9c 599 PANTHER PTHR11895:SF24 6 458 5.2E-153 T 22-04-2016 APT61_RS11765 262fb51ed32088e7e093397e9aea8d9c 599 Pfam PF01425 Amidase 25 441 8.4E-76 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS12155 3adeeb023f693b6ae7280d3533664f63 238 SUPERFAMILY SSF46894 133 232 9.64E-26 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS12155 3adeeb023f693b6ae7280d3533664f63 238 Gene3D G3DSA:3.40.50.2300 2 122 1.1E-29 T 22-04-2016 APT61_RS12155 3adeeb023f693b6ae7280d3533664f63 238 Gene3D G3DSA:1.10.10.10 134 233 2.9E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS12155 3adeeb023f693b6ae7280d3533664f63 238 Pfam PF00072 Response regulator receiver domain 4 112 1.1E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS12155 3adeeb023f693b6ae7280d3533664f63 238 SMART SM00448 2 112 1.3E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS12155 3adeeb023f693b6ae7280d3533664f63 238 PANTHER PTHR26402 2 238 2.9E-153 T 22-04-2016 APT61_RS12155 3adeeb023f693b6ae7280d3533664f63 238 SMART SM00862 155 231 1.6E-19 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS12155 3adeeb023f693b6ae7280d3533664f63 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 6.5E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS12155 3adeeb023f693b6ae7280d3533664f63 238 PANTHER PTHR26402:SF548 2 238 2.9E-153 T 22-04-2016 APT61_RS12155 3adeeb023f693b6ae7280d3533664f63 238 SUPERFAMILY SSF52172 2 121 3.84E-30 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS17060 7f344f9a174706c979e196d83bedd42c 237 Pfam PF11340 Protein of unknown function (DUF3142) 93 176 9.2E-20 T 22-04-2016 IPR021488 Protein of unknown function DUF3142 APT61_RS14590 3f598564d5d703bfc28483dbe33b07eb 88 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 85 3.4E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS14590 3f598564d5d703bfc28483dbe33b07eb 88 PANTHER PTHR33843:SF2 1 88 1.7E-24 T 22-04-2016 APT61_RS14590 3f598564d5d703bfc28483dbe33b07eb 88 PANTHER PTHR33843 1 88 1.7E-24 T 22-04-2016 APT61_RS14590 3f598564d5d703bfc28483dbe33b07eb 88 Gene3D G3DSA:3.40.50.270 1 85 1.8E-15 T 22-04-2016 APT61_RS14590 3f598564d5d703bfc28483dbe33b07eb 88 SUPERFAMILY SSF52794 1 86 2.22E-21 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS18555 f4a12aa080a9bbca4540b6fdd28ea9a4 247 Pfam PF07072 Protein of unknown function (DUF1342) 19 225 1.6E-79 T 22-04-2016 IPR009777 Cell division protein ZapD APT61_RS18555 f4a12aa080a9bbca4540b6fdd28ea9a4 247 Gene3D G3DSA:1.10.3900.10 13 173 1.3E-66 T 22-04-2016 APT61_RS18555 f4a12aa080a9bbca4540b6fdd28ea9a4 247 PANTHER PTHR39455 1 247 5.6E-119 T 22-04-2016 APT61_RS18555 f4a12aa080a9bbca4540b6fdd28ea9a4 247 Hamap MF_01092 Cell division protein ZapD [zapD]. 4 247 33.169 T 22-04-2016 IPR009777 Cell division protein ZapD APT61_RS18555 f4a12aa080a9bbca4540b6fdd28ea9a4 247 Gene3D G3DSA:2.60.440.10 174 247 1.4E-35 T 22-04-2016 IPR027462 Z ring-associated protein D, C-terminal domain APT61_RS18555 f4a12aa080a9bbca4540b6fdd28ea9a4 247 PANTHER PTHR39455:SF1 1 247 5.6E-119 T 22-04-2016 APT61_RS18555 f4a12aa080a9bbca4540b6fdd28ea9a4 247 SUPERFAMILY SSF160950 3 247 1.57E-91 T 22-04-2016 APT61_RS01025 0222ba7ccb1f302dfafe295bdd43d008 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 19 200 2.5E-57 T 22-04-2016 IPR004778 Homoserine/Threonine efflux protein GO:0016021 APT61_RS01025 0222ba7ccb1f302dfafe295bdd43d008 206 PANTHER PTHR30086 1 206 8.3E-116 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS01025 0222ba7ccb1f302dfafe295bdd43d008 206 PANTHER PTHR30086:SF14 1 206 8.3E-116 T 22-04-2016 APT61_RS01025 0222ba7ccb1f302dfafe295bdd43d008 206 PIRSF PIRSF006324 1 205 1.0E-53 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS01025 0222ba7ccb1f302dfafe295bdd43d008 206 Pfam PF01810 LysE type translocator 14 202 3.7E-46 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS01070 7b9f2e5a714226600b4cc38ba22b23b9 251 PANTHER PTHR10108:SF864 1 251 2.9E-186 T 22-04-2016 APT61_RS01070 7b9f2e5a714226600b4cc38ba22b23b9 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APT61_RS01070 7b9f2e5a714226600b4cc38ba22b23b9 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 22-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APT61_RS01070 7b9f2e5a714226600b4cc38ba22b23b9 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 2.1E-88 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APT61_RS01070 7b9f2e5a714226600b4cc38ba22b23b9 251 Gene3D G3DSA:3.40.50.150 23 247 4.6E-60 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS01070 7b9f2e5a714226600b4cc38ba22b23b9 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 18 250 3.3E-110 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APT61_RS01070 7b9f2e5a714226600b4cc38ba22b23b9 251 PANTHER PTHR10108 1 251 2.9E-186 T 22-04-2016 APT61_RS01070 7b9f2e5a714226600b4cc38ba22b23b9 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.131 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 APT61_RS01070 7b9f2e5a714226600b4cc38ba22b23b9 251 SUPERFAMILY SSF53335 19 249 9.29E-53 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS08380 2f57a89e26cb1ec3eaeb71db6f52f8d9 268 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 18 210 6.5E-21 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APT61_RS08380 2f57a89e26cb1ec3eaeb71db6f52f8d9 268 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 13 240 1.7E-65 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 APT61_RS08380 2f57a89e26cb1ec3eaeb71db6f52f8d9 268 Gene3D G3DSA:3.40.50.1000 165 250 5.0E-46 T 22-04-2016 IPR023214 HAD-like domain APT61_RS08380 2f57a89e26cb1ec3eaeb71db6f52f8d9 268 Gene3D G3DSA:3.40.50.1000 16 90 5.0E-46 T 22-04-2016 IPR023214 HAD-like domain APT61_RS08380 2f57a89e26cb1ec3eaeb71db6f52f8d9 268 PANTHER PTHR10788 1 248 1.5E-117 T 22-04-2016 APT61_RS08380 2f57a89e26cb1ec3eaeb71db6f52f8d9 268 Pfam PF02358 Trehalose-phosphatase 18 231 1.2E-52 T 22-04-2016 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 APT61_RS08380 2f57a89e26cb1ec3eaeb71db6f52f8d9 268 PANTHER PTHR10788:SF42 1 248 1.5E-117 T 22-04-2016 APT61_RS08380 2f57a89e26cb1ec3eaeb71db6f52f8d9 268 SUPERFAMILY SSF56784 18 242 1.57E-40 T 22-04-2016 IPR023214 HAD-like domain APT61_RS11885 229e43e2f922875e8774e39e8eac3a84 258 Pfam PF00561 alpha/beta hydrolase fold 22 120 5.6E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS11885 229e43e2f922875e8774e39e8eac3a84 258 Gene3D G3DSA:3.40.50.1820 6 251 2.2E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS11885 229e43e2f922875e8774e39e8eac3a84 258 SUPERFAMILY SSF53474 5 252 8.42E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS11885 229e43e2f922875e8774e39e8eac3a84 258 PANTHER PTHR10992:SF859 3 254 1.3E-46 T 22-04-2016 APT61_RS11885 229e43e2f922875e8774e39e8eac3a84 258 PANTHER PTHR10992 3 254 1.3E-46 T 22-04-2016 APT61_RS17365 1bb8773f9b620679b89e5d5062164f59 295 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 56 78 - T 22-04-2016 IPR030470 UbiA prenyltransferase conserved site APT61_RS17365 1bb8773f9b620679b89e5d5062164f59 295 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 1 283 17.954 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 APT61_RS17365 1bb8773f9b620679b89e5d5062164f59 295 PANTHER PTHR11048 1 295 7.6E-160 T 22-04-2016 APT61_RS17365 1bb8773f9b620679b89e5d5062164f59 295 PANTHER PTHR11048:SF20 1 295 7.6E-160 T 22-04-2016 APT61_RS17365 1bb8773f9b620679b89e5d5062164f59 295 Pfam PF01040 UbiA prenyltransferase family 18 264 4.9E-59 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 APT61_RS17365 1bb8773f9b620679b89e5d5062164f59 295 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 3 281 4.7E-91 T 22-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 APT61_RS20230 7e70d3ae7b8bd4225bfb5f99ab8efbec 91 Gene3D G3DSA:3.30.1660.10 24 91 2.4E-21 T 22-04-2016 IPR025543 Dodecin-like APT61_RS20230 7e70d3ae7b8bd4225bfb5f99ab8efbec 91 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 3.8E-18 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS20230 7e70d3ae7b8bd4225bfb5f99ab8efbec 91 PANTHER PTHR34156:SF6 1 91 4.7E-43 T 22-04-2016 APT61_RS20230 7e70d3ae7b8bd4225bfb5f99ab8efbec 91 SUPERFAMILY SSF159871 1 91 1.96E-21 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS20230 7e70d3ae7b8bd4225bfb5f99ab8efbec 91 PANTHER PTHR34156 1 91 4.7E-43 T 22-04-2016 APT61_RS21585 423b1761d554a685de80fde9bac4bfcc 314 Gene3D G3DSA:3.20.20.370 14 248 3.6E-109 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APT61_RS21585 423b1761d554a685de80fde9bac4bfcc 314 Pfam PF04748 Divergent polysaccharide deacetylase 28 238 5.1E-77 T 22-04-2016 IPR006837 Protein of unknown function DUF610, YibQ APT61_RS21585 423b1761d554a685de80fde9bac4bfcc 314 PANTHER PTHR30105 1 255 8.1E-102 T 22-04-2016 APT61_RS21585 423b1761d554a685de80fde9bac4bfcc 314 SUPERFAMILY SSF88713 24 238 1.2E-73 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APT61_RS15535 035a6a8debe90d0645fbbfea9640fa68 303 PANTHER PTHR30465 18 303 2.1E-224 T 22-04-2016 APT61_RS15535 035a6a8debe90d0645fbbfea9640fa68 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 2.0E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15535 035a6a8debe90d0645fbbfea9640fa68 303 SUPERFAMILY SSF161098 96 283 1.31E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15535 035a6a8debe90d0645fbbfea9640fa68 303 PANTHER PTHR30465:SF57 18 303 2.1E-224 T 22-04-2016 APT61_RS15535 035a6a8debe90d0645fbbfea9640fa68 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 72 1.9E-14 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain APT61_RS15535 035a6a8debe90d0645fbbfea9640fa68 303 Gene3D G3DSA:1.10.3720.10 93 299 9.4E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS20345 63de0019adcc9d7bc88c322bd27bf927 316 Gene3D G3DSA:1.10.287.890 207 289 4.1E-33 T 22-04-2016 APT61_RS20345 63de0019adcc9d7bc88c322bd27bf927 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 309 29.294 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APT61_RS20345 63de0019adcc9d7bc88c322bd27bf927 316 Pfam PF01715 IPP transferase 46 290 9.6E-85 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APT61_RS20345 63de0019adcc9d7bc88c322bd27bf927 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 300 3.9E-121 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 APT61_RS20345 63de0019adcc9d7bc88c322bd27bf927 316 PANTHER PTHR11088 1 300 3.8E-120 T 22-04-2016 APT61_RS20345 63de0019adcc9d7bc88c322bd27bf927 316 Gene3D G3DSA:3.40.50.300 10 178 1.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20345 63de0019adcc9d7bc88c322bd27bf927 316 SUPERFAMILY SSF52540 13 157 4.09E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10555 004897ab809e53c0c8303e379b3dccca 182 Pfam PF13302 Acetyltransferase (GNAT) domain 14 154 2.3E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS10555 004897ab809e53c0c8303e379b3dccca 182 PANTHER PTHR13256:SF22 1 179 1.1E-42 T 22-04-2016 APT61_RS10555 004897ab809e53c0c8303e379b3dccca 182 SUPERFAMILY SSF55729 8 179 1.1E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS10555 004897ab809e53c0c8303e379b3dccca 182 Gene3D G3DSA:3.40.630.30 3 179 1.0E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS10555 004897ab809e53c0c8303e379b3dccca 182 PANTHER PTHR13256 1 179 1.1E-42 T 22-04-2016 APT61_RS10135 835139ec13982dac71331d33acf927b2 402 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 192 397 1.0E-34 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APT61_RS10135 835139ec13982dac71331d33acf927b2 402 Pfam PF00072 Response regulator receiver domain 6 117 8.2E-30 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS10135 835139ec13982dac71331d33acf927b2 402 SMART SM00331 165 397 2.5E-23 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 APT61_RS10135 835139ec13982dac71331d33acf927b2 402 SMART SM00448 4 117 1.9E-41 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS10135 835139ec13982dac71331d33acf927b2 402 SUPERFAMILY SSF52172 2 144 7.4E-40 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS10135 835139ec13982dac71331d33acf927b2 402 Gene3D G3DSA:3.40.50.2300 4 129 5.1E-39 T 22-04-2016 APT61_RS10135 835139ec13982dac71331d33acf927b2 402 PANTHER PTHR26402 4 149 7.7E-42 T 22-04-2016 APT61_RS03080 d2e7faaffefa9d74d9d2bb3379050225 322 Pfam PF03741 Integral membrane protein TerC family 80 282 2.1E-55 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 APT61_RS03080 d2e7faaffefa9d74d9d2bb3379050225 322 PANTHER PTHR30238:SF0 5 322 6.9E-159 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 APT61_RS03080 d2e7faaffefa9d74d9d2bb3379050225 322 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 312 1.4E-120 T 22-04-2016 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 APT61_RS03080 d2e7faaffefa9d74d9d2bb3379050225 322 PANTHER PTHR30238 5 322 6.9E-159 T 22-04-2016 APT61_RS07755 f333cd1755f0ad896f197b2f9cc31aba 298 PANTHER PTHR22572:SF118 5 284 4.4E-199 T 22-04-2016 APT61_RS07755 f333cd1755f0ad896f197b2f9cc31aba 298 Pfam PF00483 Nucleotidyl transferase 5 274 8.6E-23 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 APT61_RS07755 f333cd1755f0ad896f197b2f9cc31aba 298 TIGRFAM TIGR01105 galF: regulatory protein GalF 1 296 2.1E-202 T 22-04-2016 IPR005774 UTP-glucose pyrophosphorylase, regulatory subunit GO:0006011|GO:0030234 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|UniPathway: UPA00030|UniPathway: UPA00215 APT61_RS07755 f333cd1755f0ad896f197b2f9cc31aba 298 Gene3D G3DSA:3.90.550.10 4 276 1.1E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS07755 f333cd1755f0ad896f197b2f9cc31aba 298 SUPERFAMILY SSF53448 3 284 1.37E-56 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS07755 f333cd1755f0ad896f197b2f9cc31aba 298 PANTHER PTHR22572 5 284 4.4E-199 T 22-04-2016 APT61_RS13245 e09134ef81486e62cd4db2b9b289748b 347 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 3.2E-134 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 APT61_RS13245 e09134ef81486e62cd4db2b9b289748b 347 SUPERFAMILY SSF55326 7 161 2.54E-40 T 22-04-2016 APT61_RS13245 e09134ef81486e62cd4db2b9b289748b 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 341 5.4E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS13245 e09134ef81486e62cd4db2b9b289748b 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 1.6E-18 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APT61_RS13245 e09134ef81486e62cd4db2b9b289748b 347 PANTHER PTHR10256 1 346 1.5E-161 T 22-04-2016 APT61_RS13245 e09134ef81486e62cd4db2b9b289748b 347 SUPERFAMILY SSF56042 164 339 4.04E-49 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS13245 e09134ef81486e62cd4db2b9b289748b 347 Gene3D G3DSA:3.30.1330.10 29 162 3.8E-32 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APT61_RS13245 e09134ef81486e62cd4db2b9b289748b 347 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 44.934 T 22-04-2016 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 APT61_RS13245 e09134ef81486e62cd4db2b9b289748b 347 Gene3D G3DSA:3.90.650.10 176 343 1.9E-18 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS13245 e09134ef81486e62cd4db2b9b289748b 347 PIRSF PIRSF036407 1 346 4.5E-116 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 APT61_RS18780 4e572fe306252e131d1b1e98f6f5eeb4 339 SUPERFAMILY SSF53474 48 339 2.43E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS18780 4e572fe306252e131d1b1e98f6f5eeb4 339 Gene3D G3DSA:3.40.50.1820 34 339 7.1E-89 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS18780 4e572fe306252e131d1b1e98f6f5eeb4 339 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 104 120 - T 22-04-2016 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 APT61_RS18780 4e572fe306252e131d1b1e98f6f5eeb4 339 Pfam PF07859 alpha/beta hydrolase fold 105 311 2.8E-67 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APT61_RS18780 4e572fe306252e131d1b1e98f6f5eeb4 339 PANTHER PTHR23024 86 339 4.9E-93 T 22-04-2016 APT61_RS18780 4e572fe306252e131d1b1e98f6f5eeb4 339 PANTHER PTHR23024:SF128 86 339 4.9E-93 T 22-04-2016 APT61_RS05895 39d382242513490a108a83123fabe707 425 PANTHER PTHR30185:SF4 179 344 7.7E-16 T 22-04-2016 APT61_RS05895 39d382242513490a108a83123fabe707 425 Pfam PF00874 PRD domain 242 328 4.2E-13 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS05895 39d382242513490a108a83123fabe707 425 SUPERFAMILY SSF63520 231 332 6.93E-17 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS05895 39d382242513490a108a83123fabe707 425 Gene3D G3DSA:1.10.1790.10 231 332 8.3E-17 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS05895 39d382242513490a108a83123fabe707 425 PANTHER PTHR30185 179 344 7.7E-16 T 22-04-2016 APT61_RS15410 5e3685ab02357c5922bf762312017899 180 SUPERFAMILY SSF48498 99 176 9.9E-5 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS15410 5e3685ab02357c5922bf762312017899 180 SUPERFAMILY SSF46689 2 81 6.16E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS15410 5e3685ab02357c5922bf762312017899 180 Gene3D G3DSA:1.10.357.10 9 177 1.1E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS15410 5e3685ab02357c5922bf762312017899 180 PANTHER PTHR30055 1 179 6.5E-80 T 22-04-2016 APT61_RS15410 5e3685ab02357c5922bf762312017899 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 1.2E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS15410 5e3685ab02357c5922bf762312017899 180 PANTHER PTHR30055:SF91 1 179 6.5E-80 T 22-04-2016 APT61_RS03260 2c7fb22e72c4c253f3716cf2435004e8 75 PANTHER PTHR38777 1 75 4.7E-21 T 22-04-2016 APT61_RS03260 2c7fb22e72c4c253f3716cf2435004e8 75 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 1.2E-17 T 22-04-2016 IPR012783 Zinc finger, C4 DksA/TraR-type APT61_RS03260 2c7fb22e72c4c253f3716cf2435004e8 75 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 31 64 1.4E-9 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APT61_RS03260 2c7fb22e72c4c253f3716cf2435004e8 75 SUPERFAMILY SSF57716 35 71 2.28E-7 T 22-04-2016 APT61_RS03260 2c7fb22e72c4c253f3716cf2435004e8 75 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 35 59 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site APT61_RS03260 2c7fb22e72c4c253f3716cf2435004e8 75 PANTHER PTHR38777:SF1 1 75 4.7E-21 T 22-04-2016 APT61_RS10855 0bfa7115cafc7f2c75704eb691754795 257 SMART SM00382 33 230 7.9E-19 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS10855 0bfa7115cafc7f2c75704eb691754795 257 Gene3D G3DSA:3.40.50.300 9 254 9.5E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10855 0bfa7115cafc7f2c75704eb691754795 257 PANTHER PTHR24220:SF327 10 257 7.0E-121 T 22-04-2016 APT61_RS10855 0bfa7115cafc7f2c75704eb691754795 257 PIRSF PIRSF039085 5 257 1.7E-105 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 APT61_RS10855 0bfa7115cafc7f2c75704eb691754795 257 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS10855 0bfa7115cafc7f2c75704eb691754795 257 SUPERFAMILY SSF52540 9 252 8.16E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS10855 0bfa7115cafc7f2c75704eb691754795 257 Pfam PF00005 ABC transporter 24 182 3.8E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS10855 0bfa7115cafc7f2c75704eb691754795 257 PANTHER PTHR24220 10 257 7.0E-121 T 22-04-2016 APT61_RS07900 139254261e5b5fc6f706d173e2114f94 111 PANTHER PTHR39591 1 111 8.2E-62 T 22-04-2016 APT61_RS07900 139254261e5b5fc6f706d173e2114f94 111 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 8 102 25.56 T 22-04-2016 IPR007458 Protein of unknown function DUF496 APT61_RS07900 139254261e5b5fc6f706d173e2114f94 111 Pfam PF04363 Protein of unknown function (DUF496) 8 99 1.0E-45 T 22-04-2016 IPR007458 Protein of unknown function DUF496 APT61_RS07900 139254261e5b5fc6f706d173e2114f94 111 PIRSF PIRSF028773 1 111 6.8E-54 T 22-04-2016 IPR007458 Protein of unknown function DUF496 APT61_RS07900 139254261e5b5fc6f706d173e2114f94 111 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 11 98 1.0E-42 T 22-04-2016 IPR007458 Protein of unknown function DUF496 APT61_RS19395 8fcb8e084a21418f4a75e617c76469fa 400 TIGRFAM TIGR01010 BexC_CtrB_KpsE: polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family 43 400 2.4E-133 T 22-04-2016 IPR005705 Polysaccharide export inner-membrane protein, BexC/CtrB/KpsE/VexD GO:0006859|GO:0009276|GO:0015542 APT61_RS19395 8fcb8e084a21418f4a75e617c76469fa 400 Pfam PF02706 Chain length determinant protein 53 185 4.8E-5 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APT61_RS06250 46016c17610d9629b2e179a940fe2d3e 197 SUPERFAMILY SSF55811 17 192 8.12E-49 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS06250 46016c17610d9629b2e179a940fe2d3e 197 Gene3D G3DSA:3.90.79.10 11 191 1.7E-56 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS06250 46016c17610d9629b2e179a940fe2d3e 197 Pfam PF00293 NUDIX domain 51 169 1.8E-9 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APT61_RS06250 46016c17610d9629b2e179a940fe2d3e 197 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 12 191 4.2E-71 T 22-04-2016 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 APT61_RS06250 46016c17610d9629b2e179a940fe2d3e 197 PANTHER PTHR11839 9 195 1.9E-40 T 22-04-2016 APT61_RS06685 b2ed72e201d8ad54b2706c7df98d2772 270 Gene3D G3DSA:3.30.70.660 115 250 1.2E-46 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS06685 b2ed72e201d8ad54b2706c7df98d2772 270 PANTHER PTHR11142 8 268 1.0E-103 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS06685 b2ed72e201d8ad54b2706c7df98d2772 270 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 11 247 6.2E-80 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS06685 b2ed72e201d8ad54b2706c7df98d2772 270 PIRSF PIRSF001430 9 261 1.4E-77 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS06685 b2ed72e201d8ad54b2706c7df98d2772 270 Gene3D G3DSA:3.30.70.580 9 113 4.5E-39 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS06685 b2ed72e201d8ad54b2706c7df98d2772 270 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 10 252 36.133 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS06685 b2ed72e201d8ad54b2706c7df98d2772 270 SUPERFAMILY SSF55120 9 265 8.06E-93 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS06685 b2ed72e201d8ad54b2706c7df98d2772 270 Pfam PF01416 tRNA pseudouridine synthase 17 112 1.9E-8 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS06685 b2ed72e201d8ad54b2706c7df98d2772 270 Pfam PF01416 tRNA pseudouridine synthase 151 253 7.4E-30 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS19890 54d3f6fbec213e3cd520fe60c032a4c5 302 PANTHER PTHR12128:SF28 1 301 5.4E-193 T 22-04-2016 APT61_RS19890 54d3f6fbec213e3cd520fe60c032a4c5 302 Pfam PF00701 Dihydrodipicolinate synthetase family 7 298 3.0E-88 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS19890 54d3f6fbec213e3cd520fe60c032a4c5 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 1.9E-24 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS19890 54d3f6fbec213e3cd520fe60c032a4c5 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 1.9E-24 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS19890 54d3f6fbec213e3cd520fe60c032a4c5 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 1.9E-24 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS19890 54d3f6fbec213e3cd520fe60c032a4c5 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 1.9E-24 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS19890 54d3f6fbec213e3cd520fe60c032a4c5 302 Gene3D G3DSA:3.20.20.70 2 301 3.5E-92 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS19890 54d3f6fbec213e3cd520fe60c032a4c5 302 SUPERFAMILY SSF51569 3 300 6.07E-85 T 22-04-2016 APT61_RS19890 54d3f6fbec213e3cd520fe60c032a4c5 302 PANTHER PTHR12128 1 301 5.4E-193 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS19890 54d3f6fbec213e3cd520fe60c032a4c5 302 PIRSF PIRSF001365 2 301 4.3E-87 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS19890 54d3f6fbec213e3cd520fe60c032a4c5 302 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 43 60 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS19890 54d3f6fbec213e3cd520fe60c032a4c5 302 SMART SM01130 6 300 9.2E-103 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 APT61_RS19890 54d3f6fbec213e3cd520fe60c032a4c5 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 169 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 APT61_RS02895 bc035bfb06647bf1d87c5f7b73e31d76 214 PANTHER PTHR14097:SF7 3 214 6.9E-69 T 22-04-2016 APT61_RS02895 bc035bfb06647bf1d87c5f7b73e31d76 214 Gene3D G3DSA:3.40.50.720 2 210 8.6E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02895 bc035bfb06647bf1d87c5f7b73e31d76 214 PANTHER PTHR14097 3 214 6.9E-69 T 22-04-2016 APT61_RS02895 bc035bfb06647bf1d87c5f7b73e31d76 214 Pfam PF13460 NAD(P)H-binding 8 188 5.0E-10 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02895 bc035bfb06647bf1d87c5f7b73e31d76 214 SUPERFAMILY SSF51735 2 196 5.21E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS03845 584c4e8890811deedefba73bdc302d8c 215 Pfam PF09997 Predicted membrane protein (DUF2238) 42 182 3.0E-55 T 22-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 APT61_RS03845 584c4e8890811deedefba73bdc302d8c 215 PIRSF PIRSF020606 1 204 2.5E-75 T 22-04-2016 IPR014509 Uncharacterised conserved protein UCP020606 APT61_RS07585 987236dfb7ce07689c1746d1a429e1e7 247 Gene3D G3DSA:1.10.1660.10 4 86 4.8E-21 T 22-04-2016 APT61_RS07585 987236dfb7ce07689c1746d1a429e1e7 247 PANTHER PTHR30204 1 238 1.1E-57 T 22-04-2016 APT61_RS07585 987236dfb7ce07689c1746d1a429e1e7 247 SMART SM00422 4 73 2.6E-26 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS07585 987236dfb7ce07689c1746d1a429e1e7 247 Pfam PF13411 MerR HTH family regulatory protein 4 72 3.4E-19 T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS07585 987236dfb7ce07689c1746d1a429e1e7 247 SUPERFAMILY SSF46955 3 88 1.28E-19 T 22-04-2016 IPR009061 Putative DNA-binding domain APT61_RS07585 987236dfb7ce07689c1746d1a429e1e7 247 PANTHER PTHR30204:SF19 1 238 1.1E-57 T 22-04-2016 APT61_RS07585 987236dfb7ce07689c1746d1a429e1e7 247 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 22-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 APT61_RS03465 fa6263b20d34e83a73ff9a1a380b807b 205 PANTHER PTHR31715 7 205 6.8E-124 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 APT61_RS03465 fa6263b20d34e83a73ff9a1a380b807b 205 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 8 204 9.6E-102 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 APT61_RS03465 fa6263b20d34e83a73ff9a1a380b807b 205 Hamap MF_01389 Urease accessory protein UreG [ureG]. 6 204 47.298 T 22-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 APT61_RS03465 fa6263b20d34e83a73ff9a1a380b807b 205 PIRSF PIRSF005624 2 204 7.7E-50 T 22-04-2016 APT61_RS03465 fa6263b20d34e83a73ff9a1a380b807b 205 SUPERFAMILY SSF52540 4 199 2.51E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03465 fa6263b20d34e83a73ff9a1a380b807b 205 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 178 5.3E-41 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain APT61_RS03465 fa6263b20d34e83a73ff9a1a380b807b 205 Gene3D G3DSA:3.40.50.300 7 181 1.5E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05565 d5fa403eab89469af0d48ecd86d80c3a 205 SUPERFAMILY SSF58014 50 146 1.44E-26 T 22-04-2016 APT61_RS05565 d5fa403eab89469af0d48ecd86d80c3a 205 Hamap MF_01151 Protein GrpE [grpE]. 3 202 20.445 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APT61_RS05565 d5fa403eab89469af0d48ecd86d80c3a 205 Gene3D G3DSA:3.90.20.20 43 145 1.0E-32 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil APT61_RS05565 d5fa403eab89469af0d48ecd86d80c3a 205 Gene3D G3DSA:2.30.22.10 146 204 1.8E-23 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APT61_RS05565 d5fa403eab89469af0d48ecd86d80c3a 205 PRINTS PR00773 GrpE protein signature 181 200 8.1E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APT61_RS05565 d5fa403eab89469af0d48ecd86d80c3a 205 PRINTS PR00773 GrpE protein signature 154 169 8.1E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APT61_RS05565 d5fa403eab89469af0d48ecd86d80c3a 205 PRINTS PR00773 GrpE protein signature 99 114 8.1E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APT61_RS05565 d5fa403eab89469af0d48ecd86d80c3a 205 PRINTS PR00773 GrpE protein signature 71 87 8.1E-26 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APT61_RS05565 d5fa403eab89469af0d48ecd86d80c3a 205 PANTHER PTHR21237 1 205 9.2E-60 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APT61_RS05565 d5fa403eab89469af0d48ecd86d80c3a 205 SUPERFAMILY SSF51064 147 203 5.1E-16 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 APT61_RS05565 d5fa403eab89469af0d48ecd86d80c3a 205 Pfam PF01025 GrpE 38 202 1.9E-45 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 APT61_RS20885 1d94dc74c4f840596fe8ebb4001acef9 237 Gene3D G3DSA:3.40.50.1000 33 236 5.8E-75 T 22-04-2016 IPR023214 HAD-like domain APT61_RS20885 1d94dc74c4f840596fe8ebb4001acef9 237 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 1 237 1.1E-109 T 22-04-2016 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 APT61_RS20885 1d94dc74c4f840596fe8ebb4001acef9 237 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 31 220 3.4E-36 T 22-04-2016 IPR005519 Acid phosphatase, class B-like APT61_RS20885 1d94dc74c4f840596fe8ebb4001acef9 237 PIRSF PIRSF017818 1 237 6.7E-113 T 22-04-2016 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 APT61_RS20885 1d94dc74c4f840596fe8ebb4001acef9 237 SUPERFAMILY SSF56784 31 237 6.68E-71 T 22-04-2016 IPR023214 HAD-like domain APT61_RS03395 77bf3587f5940e4cd0f1d5a714f41668 390 PANTHER PTHR35861 1 389 7.8E-142 T 22-04-2016 APT61_RS03395 77bf3587f5940e4cd0f1d5a714f41668 390 Pfam PF04984 Phage tail sheath protein 91 377 8.4E-57 T 22-04-2016 IPR007067 Tail sheath protein APT61_RS03395 77bf3587f5940e4cd0f1d5a714f41668 390 Pfam PF04984 Phage tail sheath protein 1 96 1.3E-15 T 22-04-2016 IPR007067 Tail sheath protein APT61_RS03395 77bf3587f5940e4cd0f1d5a714f41668 390 PANTHER PTHR35861:SF1 1 389 7.8E-142 T 22-04-2016 APT61_RS14350 35e771ebcbaed5c0973aae7fd862be66 277 TIGRFAM TIGR00145 TIGR00145: FTR1 family protein 1 267 2.6E-100 T 22-04-2016 IPR005217 Iron permease FTR1-like GO:0005381|GO:0005886|GO:0006827|GO:0033573 APT61_RS14350 35e771ebcbaed5c0973aae7fd862be66 277 PANTHER PTHR31632 1 265 2.1E-102 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 APT61_RS14350 35e771ebcbaed5c0973aae7fd862be66 277 SUPERFAMILY SSF103473 5 207 4.05E-6 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS14350 35e771ebcbaed5c0973aae7fd862be66 277 Pfam PF03239 Iron permease FTR1 family 1 254 3.2E-73 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 APT61_RS15775 dea3357d806cc1d8467c71a50c35a4ed 136 Pfam PF11076 Putative inner membrane protein YbhQ 1 132 9.8E-67 T 22-04-2016 IPR021303 Uncharacterised protein family, inner membrane, YbhQ APT61_RS06600 0596d1b3404d912d5514dc769fc1e7cf 94 Pfam PF04175 Protein of unknown function (DUF406) 3 94 4.5E-38 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 APT61_RS06600 0596d1b3404d912d5514dc769fc1e7cf 94 PANTHER PTHR38769:SF1 1 94 2.6E-30 T 22-04-2016 APT61_RS06600 0596d1b3404d912d5514dc769fc1e7cf 94 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 1 94 2.0E-42 T 22-04-2016 IPR005272 Conserved hypothetical protein CHP00743 APT61_RS06600 0596d1b3404d912d5514dc769fc1e7cf 94 PANTHER PTHR38769 1 94 2.6E-30 T 22-04-2016 APT61_RS06600 0596d1b3404d912d5514dc769fc1e7cf 94 Gene3D G3DSA:3.30.70.860 23 94 2.6E-33 T 22-04-2016 APT61_RS01275 6eea326275d182da37ef59d1e05040a3 280 SUPERFAMILY SSF53335 9 279 3.6E-100 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS01275 6eea326275d182da37ef59d1e05040a3 280 PANTHER PTHR37426 2 280 5.1E-168 T 22-04-2016 APT61_RS01275 6eea326275d182da37ef59d1e05040a3 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 2.3E-117 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 APT61_RS01275 6eea326275d182da37ef59d1e05040a3 280 PANTHER PTHR37426:SF1 2 280 5.1E-168 T 22-04-2016 APT61_RS01275 6eea326275d182da37ef59d1e05040a3 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 42.068 T 22-04-2016 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 APT61_RS01275 6eea326275d182da37ef59d1e05040a3 280 Gene3D G3DSA:3.40.50.150 1 280 1.3E-120 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS19155 4048359251fa195a1be451795d214310 259 Pfam PF01791 DeoC/LacD family aldolase 11 245 2.9E-51 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APT61_RS19155 4048359251fa195a1be451795d214310 259 SMART SM01133 10 246 4.5E-80 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 APT61_RS19155 4048359251fa195a1be451795d214310 259 PANTHER PTHR10889 9 257 1.3E-118 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APT61_RS19155 4048359251fa195a1be451795d214310 259 PIRSF PIRSF001357 5 255 1.3E-77 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APT61_RS19155 4048359251fa195a1be451795d214310 259 SUPERFAMILY SSF51569 6 246 1.36E-82 T 22-04-2016 APT61_RS19155 4048359251fa195a1be451795d214310 259 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 259 54.03 T 22-04-2016 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APT61_RS19155 4048359251fa195a1be451795d214310 259 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 232 2.8E-86 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 APT61_RS19155 4048359251fa195a1be451795d214310 259 Gene3D G3DSA:3.20.20.70 4 254 9.3E-94 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS14775 3b06cbda812b17a21f7f77fd1744ef07 151 Pfam PF06303 Organiser of macrodomain of Terminus of chromosome 1 147 3.2E-73 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 APT61_RS14775 3b06cbda812b17a21f7f77fd1744ef07 151 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 29.999 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 APT61_RS14775 3b06cbda812b17a21f7f77fd1744ef07 151 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 2.0E-67 T 22-04-2016 IPR009390 Macrodomain Ter protein, MatP GO:0043565 APT61_RS19040 17c5cbf746ad025b8866faf31f58c2a9 476 Pfam PF01235 Sodium:alanine symporter family 55 453 9.6E-142 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APT61_RS19040 17c5cbf746ad025b8866faf31f58c2a9 476 PANTHER PTHR30330 1 473 8.6E-260 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APT61_RS19040 17c5cbf746ad025b8866faf31f58c2a9 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 7.1E-48 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APT61_RS19040 17c5cbf746ad025b8866faf31f58c2a9 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 7.1E-48 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APT61_RS19040 17c5cbf746ad025b8866faf31f58c2a9 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 7.1E-48 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APT61_RS19040 17c5cbf746ad025b8866faf31f58c2a9 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 7.1E-48 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APT61_RS19040 17c5cbf746ad025b8866faf31f58c2a9 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 7.1E-48 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APT61_RS19040 17c5cbf746ad025b8866faf31f58c2a9 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 7.1E-48 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APT61_RS19040 17c5cbf746ad025b8866faf31f58c2a9 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 4.7E-148 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APT61_RS19040 17c5cbf746ad025b8866faf31f58c2a9 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 APT61_RS19040 17c5cbf746ad025b8866faf31f58c2a9 476 PANTHER PTHR30330:SF1 1 473 8.6E-260 T 22-04-2016 APT61_RS00625 c0ff8d1af18cc01def4701913577d822 220 PANTHER PTHR10683:SF14 1 219 1.2E-153 T 22-04-2016 APT61_RS00625 c0ff8d1af18cc01def4701913577d822 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS00625 c0ff8d1af18cc01def4701913577d822 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 6.1E-99 T 22-04-2016 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS00625 c0ff8d1af18cc01def4701913577d822 220 Gene3D G3DSA:3.20.20.70 1 215 3.3E-63 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS00625 c0ff8d1af18cc01def4701913577d822 220 Pfam PF00923 Transaldolase 3 206 8.4E-46 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS00625 c0ff8d1af18cc01def4701913577d822 220 PANTHER PTHR10683 1 219 1.2E-153 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS00625 c0ff8d1af18cc01def4701913577d822 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 49.396 T 22-04-2016 IPR023001 Fructose-6-phosphate aldolase GO:0016832 APT61_RS00625 c0ff8d1af18cc01def4701913577d822 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 APT61_RS00625 c0ff8d1af18cc01def4701913577d822 220 SUPERFAMILY SSF51569 1 218 1.78E-64 T 22-04-2016 APT61_RS04425 7df023fe4ed03359a984b3789b86091e 290 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.263 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APT61_RS04425 7df023fe4ed03359a984b3789b86091e 290 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 286 1.4E-105 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APT61_RS04425 7df023fe4ed03359a984b3789b86091e 290 PANTHER PTHR30589 2 290 4.1E-128 T 22-04-2016 APT61_RS04425 7df023fe4ed03359a984b3789b86091e 290 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APT61_RS04425 7df023fe4ed03359a984b3789b86091e 290 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 5.4E-77 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 APT61_RS04425 7df023fe4ed03359a984b3789b86091e 290 PANTHER PTHR30589:SF0 2 290 4.1E-128 T 22-04-2016 APT61_RS10150 79aa6451ca7412976e7b1f3d1ad3cd23 201 PANTHER PTHR10204:SF16 1 201 2.6E-116 T 22-04-2016 APT61_RS10150 79aa6451ca7412976e7b1f3d1ad3cd23 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.32 T 22-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 APT61_RS10150 79aa6451ca7412976e7b1f3d1ad3cd23 201 Gene3D G3DSA:3.40.50.360 1 199 4.2E-68 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS10150 79aa6451ca7412976e7b1f3d1ad3cd23 201 Pfam PF02525 Flavodoxin-like fold 3 195 2.1E-46 T 22-04-2016 IPR003680 Flavodoxin-like fold APT61_RS10150 79aa6451ca7412976e7b1f3d1ad3cd23 201 PANTHER PTHR10204 1 201 2.6E-116 T 22-04-2016 APT61_RS10150 79aa6451ca7412976e7b1f3d1ad3cd23 201 SUPERFAMILY SSF52218 1 199 4.89E-58 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS16485 956de91332b02b3368ad88df5b555d17 269 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 76 83 - T 22-04-2016 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 APT61_RS16485 956de91332b02b3368ad88df5b555d17 269 SUPERFAMILY SSF55895 34 262 4.71E-26 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 APT61_RS16485 956de91332b02b3368ad88df5b555d17 269 Pfam PF00445 Ribonuclease T2 family 39 237 2.6E-12 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 APT61_RS16485 956de91332b02b3368ad88df5b555d17 269 Gene3D G3DSA:3.90.730.10 34 264 1.4E-29 T 22-04-2016 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 APT61_RS16485 956de91332b02b3368ad88df5b555d17 269 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 149 160 - T 22-04-2016 IPR033130 Ribonuclease T2, His active site 2 APT61_RS07270 c7448f0555d8c0f1d45b73c9318fe14e 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 9.7E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS07270 c7448f0555d8c0f1d45b73c9318fe14e 336 PANTHER PTHR32196:SF18 1 336 1.1E-231 T 22-04-2016 IPR030158 Galactoside transport system permease protein MglC GO:0008643|GO:0016021 APT61_RS07270 c7448f0555d8c0f1d45b73c9318fe14e 336 PANTHER PTHR32196 1 336 1.1E-231 T 22-04-2016 APT61_RS14980 47bee5872e5829094659719f564b7028 230 Gene3D G3DSA:3.30.240.20 95 168 9.0E-23 T 22-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain APT61_RS14980 47bee5872e5829094659719f564b7028 230 Pfam PF04239 Protein of unknown function (DUF421) 104 169 4.3E-15 T 22-04-2016 IPR007353 Protein of unknown function DUF421 APT61_RS14980 47bee5872e5829094659719f564b7028 230 PANTHER PTHR34582 4 228 5.7E-88 T 22-04-2016 APT61_RS14980 47bee5872e5829094659719f564b7028 230 PANTHER PTHR34582:SF6 4 228 5.7E-88 T 22-04-2016 APT61_RS14980 47bee5872e5829094659719f564b7028 230 Gene3D G3DSA:3.20.70.20 194 230 8.8E-4 T 22-04-2016 APT61_RS19605 4ecf28b17eb64605c1bc2768994f55b1 463 SUPERFAMILY SSF53383 102 451 3.25E-78 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS19605 4ecf28b17eb64605c1bc2768994f55b1 463 SUPERFAMILY SSF46785 3 69 6.8E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19605 4ecf28b17eb64605c1bc2768994f55b1 463 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 2.7E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS19605 4ecf28b17eb64605c1bc2768994f55b1 463 PANTHER PTHR11751:SF10 80 451 4.7E-95 T 22-04-2016 APT61_RS19605 4ecf28b17eb64605c1bc2768994f55b1 463 PANTHER PTHR11751 80 451 4.7E-95 T 22-04-2016 APT61_RS19605 4ecf28b17eb64605c1bc2768994f55b1 463 SMART SM00345 8 67 6.3E-11 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS19605 4ecf28b17eb64605c1bc2768994f55b1 463 Gene3D G3DSA:1.10.10.10 5 70 2.6E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19605 4ecf28b17eb64605c1bc2768994f55b1 463 Gene3D G3DSA:3.40.640.10 138 349 2.0E-52 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS19605 4ecf28b17eb64605c1bc2768994f55b1 463 Pfam PF00155 Aminotransferase class I and II 127 393 1.0E-21 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS19230 74495190ea9a6e6ed802b128810894a8 262 Pfam PF06276 Ferric iron reductase FhuF-like transporter 93 236 1.9E-31 T 22-04-2016 IPR022770 Ferric iron reductase FhuF domain APT61_RS19230 74495190ea9a6e6ed802b128810894a8 262 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 241 261 2.7E-7 T 22-04-2016 IPR024726 Ferric iron reductase, C-terminal GO:0051537 APT61_RS19230 74495190ea9a6e6ed802b128810894a8 262 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 87 262 4.4E-68 T 22-04-2016 IPR008090 Ferric iron reductase APT61_RS19230 74495190ea9a6e6ed802b128810894a8 262 PRINTS PR01714 Ferric iron reductase signature 215 231 2.0E-61 T 22-04-2016 IPR008090 Ferric iron reductase APT61_RS19230 74495190ea9a6e6ed802b128810894a8 262 PRINTS PR01714 Ferric iron reductase signature 16 32 2.0E-61 T 22-04-2016 IPR008090 Ferric iron reductase APT61_RS19230 74495190ea9a6e6ed802b128810894a8 262 PRINTS PR01714 Ferric iron reductase signature 241 259 2.0E-61 T 22-04-2016 IPR008090 Ferric iron reductase APT61_RS19230 74495190ea9a6e6ed802b128810894a8 262 PRINTS PR01714 Ferric iron reductase signature 93 108 2.0E-61 T 22-04-2016 IPR008090 Ferric iron reductase APT61_RS19230 74495190ea9a6e6ed802b128810894a8 262 PRINTS PR01714 Ferric iron reductase signature 197 212 2.0E-61 T 22-04-2016 IPR008090 Ferric iron reductase APT61_RS19230 74495190ea9a6e6ed802b128810894a8 262 PRINTS PR01714 Ferric iron reductase signature 125 139 2.0E-61 T 22-04-2016 IPR008090 Ferric iron reductase APT61_RS19230 74495190ea9a6e6ed802b128810894a8 262 PRINTS PR01714 Ferric iron reductase signature 173 189 2.0E-61 T 22-04-2016 IPR008090 Ferric iron reductase APT61_RS19230 74495190ea9a6e6ed802b128810894a8 262 PRINTS PR01714 Ferric iron reductase signature 56 73 2.0E-61 T 22-04-2016 IPR008090 Ferric iron reductase APT61_RS17445 af55859c3beba834b84e6b5fe0d79eaf 294 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 294 2.0E-83 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 APT61_RS17445 af55859c3beba834b84e6b5fe0d79eaf 294 SUPERFAMILY SSF111364 32 294 4.05E-88 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 APT61_RS17445 af55859c3beba834b84e6b5fe0d79eaf 294 Gene3D G3DSA:2.40.230.20 25 294 1.8E-104 T 22-04-2016 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 APT61_RS17445 af55859c3beba834b84e6b5fe0d79eaf 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 240 259 9.4E-113 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APT61_RS17445 af55859c3beba834b84e6b5fe0d79eaf 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 55 79 9.4E-113 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APT61_RS17445 af55859c3beba834b84e6b5fe0d79eaf 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 89 110 9.4E-113 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APT61_RS17445 af55859c3beba834b84e6b5fe0d79eaf 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 115 135 9.4E-113 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APT61_RS17445 af55859c3beba834b84e6b5fe0d79eaf 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 270 293 9.4E-113 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APT61_RS17445 af55859c3beba834b84e6b5fe0d79eaf 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 150 175 9.4E-113 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APT61_RS17445 af55859c3beba834b84e6b5fe0d79eaf 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 182 205 9.4E-113 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APT61_RS17445 af55859c3beba834b84e6b5fe0d79eaf 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 28 50 9.4E-113 T 22-04-2016 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 APT61_RS08520 ee7f233619af099de1ef3641e5a4b280 247 Gene3D G3DSA:3.20.20.380 3 244 1.1E-95 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 APT61_RS08520 ee7f233619af099de1ef3641e5a4b280 247 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 243 39.45 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 APT61_RS08520 ee7f233619af099de1ef3641e5a4b280 247 PANTHER PTHR12598:SF0 2 247 5.4E-107 T 22-04-2016 APT61_RS08520 ee7f233619af099de1ef3641e5a4b280 247 PANTHER PTHR12598 2 247 5.4E-107 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 APT61_RS08520 ee7f233619af099de1ef3641e5a4b280 247 SUPERFAMILY SSF110395 3 244 1.14E-77 T 22-04-2016 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 APT61_RS08520 ee7f233619af099de1ef3641e5a4b280 247 Pfam PF03932 CutC family 3 200 1.7E-79 T 22-04-2016 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 APT61_RS01380 a1f63b6bb0c981dc10b843a22c55db01 117 SUPERFAMILY SSF54637 8 107 7.46E-17 T 22-04-2016 IPR029069 HotDog domain APT61_RS01380 a1f63b6bb0c981dc10b843a22c55db01 117 Gene3D G3DSA:3.10.129.10 9 104 2.0E-16 T 22-04-2016 IPR029069 HotDog domain APT61_RS01380 a1f63b6bb0c981dc10b843a22c55db01 117 Pfam PF07977 FabA-like domain 16 88 1.6E-5 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 APT61_RS01380 a1f63b6bb0c981dc10b843a22c55db01 117 PIRSF PIRSF030962 1 117 1.3E-50 T 22-04-2016 IPR016962 Dehydrase, ECs4332, predicted APT61_RS03980 9a36395ce5768f2afb018422f9cb208f 325 Pfam PF00437 Type II/IV secretion system protein 111 266 8.0E-41 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APT61_RS03980 9a36395ce5768f2afb018422f9cb208f 325 SUPERFAMILY SSF52540 4 323 4.88E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03980 9a36395ce5768f2afb018422f9cb208f 325 PANTHER PTHR30486:SF6 1 325 4.9E-153 T 22-04-2016 APT61_RS03980 9a36395ce5768f2afb018422f9cb208f 325 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 189 203 - T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 APT61_RS03980 9a36395ce5768f2afb018422f9cb208f 325 PANTHER PTHR30486 1 325 4.9E-153 T 22-04-2016 APT61_RS03980 9a36395ce5768f2afb018422f9cb208f 325 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 324 1.3E-125 T 22-04-2016 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 APT61_RS03980 9a36395ce5768f2afb018422f9cb208f 325 Gene3D G3DSA:3.40.50.300 98 323 2.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13085 eff355424b3f0c409aafac8df14d3b25 196 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 161 4.7E-34 T 22-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase APT61_RS13085 eff355424b3f0c409aafac8df14d3b25 196 PANTHER PTHR35531 1 193 1.6E-67 T 22-04-2016 APT61_RS13085 eff355424b3f0c409aafac8df14d3b25 196 PIRSF PIRSF030780 1 195 3.4E-119 T 22-04-2016 IPR016956 Inner membrane protein YdjM APT61_RS13085 eff355424b3f0c409aafac8df14d3b25 196 PANTHER PTHR35531:SF1 1 193 1.6E-67 T 22-04-2016 APT61_RS13850 0d16366723c9e1038bcdc4e6ff34e91a 273 Gene3D G3DSA:3.30.1600.10 149 193 5.2E-26 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain APT61_RS13850 0d16366723c9e1038bcdc4e6ff34e91a 273 Gene3D G3DSA:3.30.1600.10 57 96 5.2E-26 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain APT61_RS13850 0d16366723c9e1038bcdc4e6ff34e91a 273 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 41 271 61.42 T 22-04-2016 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 APT61_RS13850 0d16366723c9e1038bcdc4e6ff34e91a 273 SUPERFAMILY SSF52467 41 269 2.95E-73 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS13850 0d16366723c9e1038bcdc4e6ff34e91a 273 Pfam PF02146 Sir2 family 48 221 4.8E-50 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 APT61_RS13850 0d16366723c9e1038bcdc4e6ff34e91a 273 PANTHER PTHR11085 37 269 2.8E-79 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 APT61_RS13850 0d16366723c9e1038bcdc4e6ff34e91a 273 PANTHER PTHR11085:SF17 37 269 2.8E-79 T 22-04-2016 APT61_RS13850 0d16366723c9e1038bcdc4e6ff34e91a 273 Gene3D G3DSA:3.40.50.1220 200 266 5.2E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS13850 0d16366723c9e1038bcdc4e6ff34e91a 273 Gene3D G3DSA:3.40.50.1220 38 56 5.2E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS13850 0d16366723c9e1038bcdc4e6ff34e91a 273 Gene3D G3DSA:3.40.50.1220 106 148 5.2E-41 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS10370 81a6768c33234d076f5bc63a59cafe47 225 Gene3D G3DSA:2.60.120.10 137 213 2.9E-5 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS10370 81a6768c33234d076f5bc63a59cafe47 225 Gene3D G3DSA:2.60.120.10 16 125 2.2E-37 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS10370 81a6768c33234d076f5bc63a59cafe47 225 Pfam PF12973 ChrR Cupin-like domain 19 108 1.3E-37 T 22-04-2016 IPR025979 ChrR-like cupin domain APT61_RS10370 81a6768c33234d076f5bc63a59cafe47 225 Pfam PF12973 ChrR Cupin-like domain 134 213 7.6E-8 T 22-04-2016 IPR025979 ChrR-like cupin domain APT61_RS10370 81a6768c33234d076f5bc63a59cafe47 225 SUPERFAMILY SSF51182 127 217 5.2E-14 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS10370 81a6768c33234d076f5bc63a59cafe47 225 SUPERFAMILY SSF51182 3 124 2.24E-34 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS08540 fafe8158ac65c72d1ace9b2a361d9fbf 272 Pfam PF01904 Protein of unknown function DUF72 21 249 4.1E-51 T 22-04-2016 IPR002763 Protein of unknown function DUF72 APT61_RS08540 fafe8158ac65c72d1ace9b2a361d9fbf 272 PANTHER PTHR30348 1 271 4.2E-86 T 22-04-2016 APT61_RS08540 fafe8158ac65c72d1ace9b2a361d9fbf 272 SUPERFAMILY SSF117396 1 252 1.31E-64 T 22-04-2016 IPR002763 Protein of unknown function DUF72 APT61_RS08540 fafe8158ac65c72d1ace9b2a361d9fbf 272 PANTHER PTHR30348:SF3 1 271 4.2E-86 T 22-04-2016 APT61_RS08540 fafe8158ac65c72d1ace9b2a361d9fbf 272 Gene3D G3DSA:3.20.20.410 1 257 6.6E-70 T 22-04-2016 IPR002763 Protein of unknown function DUF72 APT61_RS00790 244c21717afbc02b6ab3d07e1e3cc488 309 Gene3D G3DSA:3.30.470.10 7 130 3.5E-42 T 22-04-2016 APT61_RS00790 244c21717afbc02b6ab3d07e1e3cc488 309 PANTHER PTHR11825:SF7 1 306 9.0E-134 T 22-04-2016 APT61_RS00790 244c21717afbc02b6ab3d07e1e3cc488 309 Pfam PF01063 Amino-transferase class IV 36 268 3.1E-49 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APT61_RS00790 244c21717afbc02b6ab3d07e1e3cc488 309 PANTHER PTHR11825 1 306 9.0E-134 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APT61_RS00790 244c21717afbc02b6ab3d07e1e3cc488 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 1.1E-144 T 22-04-2016 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|UniPathway: UPA00047|UniPathway: UPA00048|UniPathway: UPA00049 APT61_RS00790 244c21717afbc02b6ab3d07e1e3cc488 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 22-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 APT61_RS00790 244c21717afbc02b6ab3d07e1e3cc488 309 SUPERFAMILY SSF56752 7 308 2.62E-104 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 APT61_RS00790 244c21717afbc02b6ab3d07e1e3cc488 309 Gene3D G3DSA:3.20.10.10 135 295 3.3E-57 T 22-04-2016 APT61_RS03710 dd21c050892e43102089de4509702f5b 275 SUPERFAMILY SSF51430 5 268 4.32E-88 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS03710 dd21c050892e43102089de4509702f5b 275 Gene3D G3DSA:3.20.20.100 4 271 1.9E-99 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS03710 dd21c050892e43102089de4509702f5b 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APT61_RS03710 dd21c050892e43102089de4509702f5b 275 PANTHER PTHR11732 3 274 3.4E-130 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS03710 dd21c050892e43102089de4509702f5b 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APT61_RS03710 dd21c050892e43102089de4509702f5b 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 APT61_RS03710 dd21c050892e43102089de4509702f5b 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 4.2E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS03710 dd21c050892e43102089de4509702f5b 275 PRINTS PR00069 Aldo-keto reductase signature 37 61 4.2E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS03710 dd21c050892e43102089de4509702f5b 275 PRINTS PR00069 Aldo-keto reductase signature 123 140 4.2E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS03710 dd21c050892e43102089de4509702f5b 275 PRINTS PR00069 Aldo-keto reductase signature 157 186 4.2E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS03710 dd21c050892e43102089de4509702f5b 275 PRINTS PR00069 Aldo-keto reductase signature 91 109 4.2E-45 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS03710 dd21c050892e43102089de4509702f5b 275 Pfam PF00248 Aldo/keto reductase family 18 261 7.2E-47 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS19695 80a3a49b5354c6d7dbd06e1fcf7197db 623 Pfam PF07969 Amidohydrolase family 54 538 1.4E-122 T 22-04-2016 IPR013108 Amidohydrolase 3 APT61_RS19695 80a3a49b5354c6d7dbd06e1fcf7197db 623 PANTHER PTHR22642 1 556 4.7E-165 T 22-04-2016 APT61_RS19695 80a3a49b5354c6d7dbd06e1fcf7197db 623 SUPERFAMILY SSF51338 4 66 4.98E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS19695 80a3a49b5354c6d7dbd06e1fcf7197db 623 SUPERFAMILY SSF51338 497 543 4.98E-21 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS19695 80a3a49b5354c6d7dbd06e1fcf7197db 623 SUPERFAMILY SSF51556 65 127 1.05E-46 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS19695 80a3a49b5354c6d7dbd06e1fcf7197db 623 SUPERFAMILY SSF51556 207 497 1.05E-46 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS19695 80a3a49b5354c6d7dbd06e1fcf7197db 623 PANTHER PTHR22642:SF2 1 556 4.7E-165 T 22-04-2016 APT61_RS19695 80a3a49b5354c6d7dbd06e1fcf7197db 623 Gene3D G3DSA:3.20.20.140 207 490 4.4E-20 T 22-04-2016 APT61_RS19695 80a3a49b5354c6d7dbd06e1fcf7197db 623 Gene3D G3DSA:2.30.40.10 497 539 1.2E-16 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS19695 80a3a49b5354c6d7dbd06e1fcf7197db 623 Gene3D G3DSA:2.30.40.10 5 67 1.2E-16 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 PANTHER PTHR24322:SF564 199 231 3.3E-65 T 22-04-2016 APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 PANTHER PTHR24322:SF564 54 183 3.3E-65 T 22-04-2016 APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 Gene3D G3DSA:3.40.50.720 45 291 7.8E-80 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 59 290 6.1E-57 T 22-04-2016 APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 189 2.4E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 218 2.4E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 255 275 2.4E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 138 2.4E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 237 2.4E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 51 68 2.4E-35 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 SUPERFAMILY SSF51735 49 291 4.86E-78 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 PANTHER PTHR24322 199 231 3.3E-65 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 PANTHER PTHR24322 54 183 3.3E-65 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 138 1.4E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 179 187 1.4E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS14505 89de07d2cb58d483f0845899f1a67385 294 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 199 218 1.4E-9 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS03535 e5900442ca7531a5f113d76d66e17ae3 433 SMART SM01118 2 202 1.6E-39 T 22-04-2016 IPR023577 CYTH domain APT61_RS03535 e5900442ca7531a5f113d76d66e17ae3 433 Gene3D G3DSA:2.40.320.10 1 211 1.7E-40 T 22-04-2016 IPR023577 CYTH domain APT61_RS03535 e5900442ca7531a5f113d76d66e17ae3 433 SUPERFAMILY SSF55154 1 218 5.07E-50 T 22-04-2016 IPR033469 CYTH-like domain APT61_RS03535 e5900442ca7531a5f113d76d66e17ae3 433 PANTHER PTHR39569:SF1 2 433 3.1E-137 T 22-04-2016 APT61_RS03535 e5900442ca7531a5f113d76d66e17ae3 433 Pfam PF01928 CYTH domain 3 196 2.9E-36 T 22-04-2016 IPR023577 CYTH domain APT61_RS03535 e5900442ca7531a5f113d76d66e17ae3 433 PANTHER PTHR39569 2 433 3.1E-137 T 22-04-2016 APT61_RS19340 18e6a562c1d35280442e7a82a98d38d8 296 Pfam PF12833 Helix-turn-helix domain 212 290 2.8E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS19340 18e6a562c1d35280442e7a82a98d38d8 296 SUPERFAMILY SSF46689 244 291 1.16E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19340 18e6a562c1d35280442e7a82a98d38d8 296 PANTHER PTHR11019 31 291 1.1E-92 T 22-04-2016 APT61_RS19340 18e6a562c1d35280442e7a82a98d38d8 296 Pfam PF07883 Cupin domain 38 99 2.9E-7 T 22-04-2016 IPR013096 Cupin 2, conserved barrel APT61_RS19340 18e6a562c1d35280442e7a82a98d38d8 296 Gene3D G3DSA:1.10.10.60 242 292 3.1E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS19340 18e6a562c1d35280442e7a82a98d38d8 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 258 273 1.1E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS19340 18e6a562c1d35280442e7a82a98d38d8 296 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 273 289 1.1E-6 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS19340 18e6a562c1d35280442e7a82a98d38d8 296 SMART SM00342 206 289 1.9E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS19340 18e6a562c1d35280442e7a82a98d38d8 296 PANTHER PTHR11019:SF45 31 291 1.1E-92 T 22-04-2016 APT61_RS19340 18e6a562c1d35280442e7a82a98d38d8 296 SUPERFAMILY SSF51182 40 123 5.34E-11 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS19340 18e6a562c1d35280442e7a82a98d38d8 296 Gene3D G3DSA:2.60.120.10 38 100 2.4E-8 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS19340 18e6a562c1d35280442e7a82a98d38d8 296 TIGRFAM TIGR02297 HpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA 6 291 4.6E-117 T 22-04-2016 IPR011983 4-hydroxyphenylacetate catabolism regulatory protein HpaA APT61_RS19340 18e6a562c1d35280442e7a82a98d38d8 296 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 243 285 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS18420 eb2c33c9a59c034d350f7c953ef08bf9 308 Gene3D G3DSA:3.40.50.300 3 229 1.3E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18420 eb2c33c9a59c034d350f7c953ef08bf9 308 SMART SM00382 30 213 6.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS18420 eb2c33c9a59c034d350f7c953ef08bf9 308 PANTHER PTHR24220:SF305 6 303 5.1E-192 T 22-04-2016 APT61_RS18420 eb2c33c9a59c034d350f7c953ef08bf9 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS18420 eb2c33c9a59c034d350f7c953ef08bf9 308 SUPERFAMILY SSF52540 4 233 7.58E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS18420 eb2c33c9a59c034d350f7c953ef08bf9 308 Pfam PF00005 ABC transporter 21 165 3.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS18420 eb2c33c9a59c034d350f7c953ef08bf9 308 PANTHER PTHR24220 6 303 5.1E-192 T 22-04-2016 APT61_RS01305 feb042ad171bda7926b0da15baaa5189 498 Pfam PF01384 Phosphate transporter family 30 487 8.7E-86 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APT61_RS01305 feb042ad171bda7926b0da15baaa5189 498 PANTHER PTHR11101:SF59 2 498 0.0 T 22-04-2016 APT61_RS01305 feb042ad171bda7926b0da15baaa5189 498 PANTHER PTHR11101 2 498 0.0 T 22-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 APT61_RS14875 254b270291315aa34eabff217ea54554 396 Pfam PF00155 Aminotransferase class I and II 28 392 1.1E-92 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS14875 254b270291315aa34eabff217ea54554 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 APT61_RS14875 254b270291315aa34eabff217ea54554 396 PANTHER PTHR11879 1 395 3.0E-281 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APT61_RS14875 254b270291315aa34eabff217ea54554 396 PANTHER PTHR11879:SF11 1 395 3.0E-281 T 22-04-2016 APT61_RS14875 254b270291315aa34eabff217ea54554 396 Gene3D G3DSA:3.40.640.10 45 315 1.4E-108 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS14875 254b270291315aa34eabff217ea54554 396 SUPERFAMILY SSF53383 1 396 4.66E-117 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS14875 254b270291315aa34eabff217ea54554 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 1.3E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APT61_RS14875 254b270291315aa34eabff217ea54554 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 1.3E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APT61_RS14875 254b270291315aa34eabff217ea54554 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 1.3E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APT61_RS14875 254b270291315aa34eabff217ea54554 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 1.3E-39 T 22-04-2016 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 APT61_RS20140 13392c9dbdde778df7518b55fae55f35 141 PANTHER PTHR30041 1 136 1.7E-53 T 22-04-2016 APT61_RS20140 13392c9dbdde778df7518b55fae55f35 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 7.2E-40 T 22-04-2016 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 APT61_RS20140 13392c9dbdde778df7518b55fae55f35 141 PANTHER PTHR30041:SF0 1 136 1.7E-53 T 22-04-2016 APT61_RS20140 13392c9dbdde778df7518b55fae55f35 141 SUPERFAMILY SSF52833 3 137 1.39E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS20140 13392c9dbdde778df7518b55fae55f35 141 Gene3D G3DSA:3.40.30.10 1 141 3.0E-60 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS20140 13392c9dbdde778df7518b55fae55f35 141 Pfam PF03960 ArsC family 7 114 2.1E-19 T 22-04-2016 IPR006660 Arsenate reductase-like APT61_RS15135 ed3ecd58a883d6699f5b3cd55a5b990a 322 Pfam PF00175 Oxidoreductase NAD-binding domain 116 211 4.4E-7 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APT61_RS15135 ed3ecd58a883d6699f5b3cd55a5b990a 322 Gene3D G3DSA:2.40.30.10 10 105 2.7E-18 T 22-04-2016 APT61_RS15135 ed3ecd58a883d6699f5b3cd55a5b990a 322 PANTHER PTHR19370:SF89 8 247 8.9E-126 T 22-04-2016 APT61_RS15135 ed3ecd58a883d6699f5b3cd55a5b990a 322 SUPERFAMILY SSF54292 221 321 1.22E-23 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS15135 ed3ecd58a883d6699f5b3cd55a5b990a 322 Gene3D G3DSA:3.40.50.80 106 225 7.8E-23 T 22-04-2016 APT61_RS15135 ed3ecd58a883d6699f5b3cd55a5b990a 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 55 69 1.2E-5 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APT61_RS15135 ed3ecd58a883d6699f5b3cd55a5b990a 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 1.2E-5 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APT61_RS15135 ed3ecd58a883d6699f5b3cd55a5b990a 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 1.2E-5 T 22-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 APT61_RS15135 ed3ecd58a883d6699f5b3cd55a5b990a 322 PANTHER PTHR19370 8 247 8.9E-126 T 22-04-2016 APT61_RS15135 ed3ecd58a883d6699f5b3cd55a5b990a 322 Gene3D G3DSA:3.10.20.30 226 321 5.1E-24 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS15135 ed3ecd58a883d6699f5b3cd55a5b990a 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 255 315 6.9E-13 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS15135 ed3ecd58a883d6699f5b3cd55a5b990a 322 SUPERFAMILY SSF63380 9 105 4.64E-21 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APT61_RS15135 ed3ecd58a883d6699f5b3cd55a5b990a 322 Pfam PF00970 Oxidoreductase FAD-binding domain 18 104 3.1E-7 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APT61_RS15135 ed3ecd58a883d6699f5b3cd55a5b990a 322 SUPERFAMILY SSF52343 102 232 1.96E-24 T 22-04-2016 APT61_RS02255 87c73f062ce6701be763a4f56b63ebd3 184 Gene3D G3DSA:2.160.10.10 6 177 1.6E-43 T 22-04-2016 APT61_RS02255 87c73f062ce6701be763a4f56b63ebd3 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 3.9E-8 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS02255 87c73f062ce6701be763a4f56b63ebd3 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 47 6.6E-5 T 22-04-2016 IPR001451 Hexapeptide repeat APT61_RS02255 87c73f062ce6701be763a4f56b63ebd3 184 SUPERFAMILY SSF51161 4 176 8.46E-45 T 22-04-2016 IPR011004 Trimeric LpxA-like APT61_RS02255 87c73f062ce6701be763a4f56b63ebd3 184 PANTHER PTHR13061 21 182 1.6E-70 T 22-04-2016 APT61_RS20575 c7661904230a98f2705ff42909ad0647 403 PANTHER PTHR12526 1 145 3.4E-54 T 22-04-2016 APT61_RS20575 c7661904230a98f2705ff42909ad0647 403 PANTHER PTHR12526 178 403 3.4E-54 T 22-04-2016 APT61_RS20575 c7661904230a98f2705ff42909ad0647 403 Pfam PF13439 Glycosyltransferase Family 4 14 220 8.7E-15 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT61_RS20575 c7661904230a98f2705ff42909ad0647 403 SUPERFAMILY SSF53756 1 400 1.79E-71 T 22-04-2016 APT61_RS20575 c7661904230a98f2705ff42909ad0647 403 Pfam PF00534 Glycosyl transferases group 1 227 376 2.1E-24 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APT61_RS20575 c7661904230a98f2705ff42909ad0647 403 Gene3D G3DSA:3.40.50.2000 227 376 2.4E-22 T 22-04-2016 APT61_RS04705 44301f86778173ad7b27cbe7157b9e1e 201 PANTHER PTHR11055 3 199 7.6E-134 T 22-04-2016 APT61_RS04705 44301f86778173ad7b27cbe7157b9e1e 201 Gene3D G3DSA:3.40.50.300 6 200 1.6E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04705 44301f86778173ad7b27cbe7157b9e1e 201 Pfam PF01583 Adenylylsulphate kinase 27 180 1.1E-72 T 22-04-2016 APT61_RS04705 44301f86778173ad7b27cbe7157b9e1e 201 SUPERFAMILY SSF52540 23 193 5.25E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04705 44301f86778173ad7b27cbe7157b9e1e 201 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 26 197 38.354 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 APT61_RS04705 44301f86778173ad7b27cbe7157b9e1e 201 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 10 193 8.7E-88 T 22-04-2016 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: REACT_13433|UniPathway: UPA00140 APT61_RS00085 5a622139ad4d70b862b05e203b563e73 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 3.5E-8 T 22-04-2016 APT61_RS00085 5a622139ad4d70b862b05e203b563e73 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 3.5E-8 T 22-04-2016 APT61_RS00085 5a622139ad4d70b862b05e203b563e73 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 200 218 3.5E-8 T 22-04-2016 APT61_RS00085 5a622139ad4d70b862b05e203b563e73 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 3.5E-8 T 22-04-2016 APT61_RS00085 5a622139ad4d70b862b05e203b563e73 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 3.5E-8 T 22-04-2016 APT61_RS00085 5a622139ad4d70b862b05e203b563e73 475 PANTHER PTHR23501 4 475 3.9E-299 T 22-04-2016 APT61_RS00085 5a622139ad4d70b862b05e203b563e73 475 Pfam PF07690 Major Facilitator Superfamily 17 406 6.1E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS00085 5a622139ad4d70b862b05e203b563e73 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 432 5.6E-77 T 22-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 APT61_RS00085 5a622139ad4d70b862b05e203b563e73 475 Gene3D G3DSA:1.20.1250.20 259 454 2.8E-16 T 22-04-2016 APT61_RS00085 5a622139ad4d70b862b05e203b563e73 475 Gene3D G3DSA:1.20.1250.20 14 189 3.8E-26 T 22-04-2016 APT61_RS00085 5a622139ad4d70b862b05e203b563e73 475 SUPERFAMILY SSF103473 14 195 1.31E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS00085 5a622139ad4d70b862b05e203b563e73 475 SUPERFAMILY SSF103473 245 453 1.31E-58 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS00085 5a622139ad4d70b862b05e203b563e73 475 PANTHER PTHR23501:SF1 4 475 3.9E-299 T 22-04-2016 APT61_RS09600 7d511a9b146a58cb91666de3461f31ab 72 Pfam PF05433 Glycine zipper 2TM domain 34 70 9.0E-8 T 22-04-2016 IPR008816 Glycine zipper 2TM domain GO:0019867 APT61_RS15035 0a71d96a7253b6283957d157173ef69d 447 Gene3D G3DSA:1.20.272.10 249 347 5.3E-42 T 22-04-2016 APT61_RS15035 0a71d96a7253b6283957d157173ef69d 447 SMART SM00382 49 165 2.8E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS15035 0a71d96a7253b6283957d157173ef69d 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 7.3E-66 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal APT61_RS15035 0a71d96a7253b6283957d157173ef69d 447 PANTHER PTHR13779 11 447 1.5E-198 T 22-04-2016 APT61_RS15035 0a71d96a7253b6283957d157173ef69d 447 Gene3D G3DSA:1.10.3710.10 348 444 4.2E-35 T 22-04-2016 APT61_RS15035 0a71d96a7253b6283957d157173ef69d 447 Pfam PF16193 AAA C-terminal domain 188 267 4.9E-21 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain APT61_RS15035 0a71d96a7253b6283957d157173ef69d 447 Gene3D G3DSA:3.40.50.300 12 153 8.4E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15035 0a71d96a7253b6283957d157173ef69d 447 SUPERFAMILY SSF52540 7 232 8.52E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15035 0a71d96a7253b6283957d157173ef69d 447 SUPERFAMILY SSF48019 252 434 3.57E-72 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 APT61_RS15035 0a71d96a7253b6283957d157173ef69d 447 PANTHER PTHR13779:SF7 11 447 1.5E-198 T 22-04-2016 APT61_RS15035 0a71d96a7253b6283957d157173ef69d 447 Gene3D G3DSA:1.10.8.60 154 223 2.8E-8 T 22-04-2016 APT61_RS15035 0a71d96a7253b6283957d157173ef69d 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 1.2E-16 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 Pfam PF13538 UvrD-like helicase C-terminal domain 532 578 2.4E-15 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 Pfam PF13604 AAA domain 154 314 6.6E-32 T 22-04-2016 APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 SUPERFAMILY SSF52540 7 359 1.86E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 PANTHER PTHR10887 596 606 1.6E-85 T 22-04-2016 APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 PANTHER PTHR10887 146 318 1.6E-85 T 22-04-2016 APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 PANTHER PTHR10887 11 81 1.6E-85 T 22-04-2016 APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 SUPERFAMILY SSF52540 280 377 1.15E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 SUPERFAMILY SSF52540 433 601 1.15E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 Gene3D G3DSA:3.40.50.300 349 377 1.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 Gene3D G3DSA:3.40.50.300 111 317 1.1E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 15 603 54.205 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 9 600 1.6E-194 T 22-04-2016 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 Gene3D G3DSA:3.40.50.300 524 581 1.1E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 PANTHER PTHR10887:SF351 596 606 1.6E-85 T 22-04-2016 APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 PANTHER PTHR10887:SF351 146 318 1.6E-85 T 22-04-2016 APT61_RS04470 3bd8c97762def5f45d2d0af7ee87e3ba 606 PANTHER PTHR10887:SF351 11 81 1.6E-85 T 22-04-2016 APT61_RS05665 91b28a77749585883e4fcdc765d03b75 243 SUPERFAMILY SSF64438 3 242 1.79E-87 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic APT61_RS05665 91b28a77749585883e4fcdc765d03b75 243 PANTHER PTHR30616 1 243 6.1E-151 T 22-04-2016 APT61_RS05665 91b28a77749585883e4fcdc765d03b75 243 Gene3D G3DSA:3.60.140.10 3 242 3.8E-98 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase APT61_RS05665 91b28a77749585883e4fcdc765d03b75 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 5.1E-77 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase APT61_RS05665 91b28a77749585883e4fcdc765d03b75 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 27 242 5.4E-76 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase APT61_RS05665 91b28a77749585883e4fcdc765d03b75 243 PANTHER PTHR30616:SF3 1 243 6.1E-151 T 22-04-2016 APT61_RS17765 fb9bce7a9a3f3a82ad764ed1d4113821 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 4.6E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS17765 fb9bce7a9a3f3a82ad764ed1d4113821 299 PANTHER PTHR30537 1 299 2.0E-171 T 22-04-2016 APT61_RS17765 fb9bce7a9a3f3a82ad764ed1d4113821 299 Pfam PF03466 LysR substrate binding domain 90 294 7.8E-35 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS17765 fb9bce7a9a3f3a82ad764ed1d4113821 299 SUPERFAMILY SSF46785 5 90 5.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17765 fb9bce7a9a3f3a82ad764ed1d4113821 299 Gene3D G3DSA:1.10.10.10 5 80 9.7E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17765 fb9bce7a9a3f3a82ad764ed1d4113821 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS17765 fb9bce7a9a3f3a82ad764ed1d4113821 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS17765 fb9bce7a9a3f3a82ad764ed1d4113821 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.5E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS17765 fb9bce7a9a3f3a82ad764ed1d4113821 299 Gene3D G3DSA:3.40.190.10 84 148 4.8E-5 T 22-04-2016 APT61_RS17765 fb9bce7a9a3f3a82ad764ed1d4113821 299 PANTHER PTHR30537:SF1 1 299 2.0E-171 T 22-04-2016 APT61_RS17765 fb9bce7a9a3f3a82ad764ed1d4113821 299 Gene3D G3DSA:3.40.190.10 164 265 3.8E-24 T 22-04-2016 APT61_RS17765 fb9bce7a9a3f3a82ad764ed1d4113821 299 SUPERFAMILY SSF53850 90 294 2.17E-39 T 22-04-2016 APT61_RS22025 548feb3dc1cce8d35e68f4d9dea2dbee 109 Pfam PF07119 Protein of unknown function (DUF1375) 13 76 1.1E-11 T 22-04-2016 IPR010780 Protein of unknown function DUF1375 APT61_RS04020 041fecfb974ed8346b182acc717505e6 465 ProSitePatterns PS00216 Sugar transport proteins signature 1. 308 324 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS04020 041fecfb974ed8346b182acc717505e6 465 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 9 448 7.0E-151 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APT61_RS04020 041fecfb974ed8346b182acc717505e6 465 ProSitePatterns PS00217 Sugar transport proteins signature 2. 115 140 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS04020 041fecfb974ed8346b182acc717505e6 465 PRINTS PR00171 Sugar transporter signature 27 37 1.5E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APT61_RS04020 041fecfb974ed8346b182acc717505e6 465 PRINTS PR00171 Sugar transporter signature 110 129 1.5E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APT61_RS04020 041fecfb974ed8346b182acc717505e6 465 PRINTS PR00171 Sugar transporter signature 376 388 1.5E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APT61_RS04020 041fecfb974ed8346b182acc717505e6 465 PRINTS PR00171 Sugar transporter signature 263 273 1.5E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APT61_RS04020 041fecfb974ed8346b182acc717505e6 465 PRINTS PR00171 Sugar transporter signature 353 374 1.5E-23 T 22-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 APT61_RS04020 041fecfb974ed8346b182acc717505e6 465 Pfam PF00083 Sugar (and other) transporter 19 451 4.5E-140 T 22-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 APT61_RS04020 041fecfb974ed8346b182acc717505e6 465 PANTHER PTHR23500:SF119 15 461 1.2E-235 T 22-04-2016 APT61_RS04020 041fecfb974ed8346b182acc717505e6 465 SUPERFAMILY SSF103473 11 449 2.49E-79 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS04020 041fecfb974ed8346b182acc717505e6 465 Gene3D G3DSA:1.20.1250.20 21 207 1.0E-29 T 22-04-2016 APT61_RS04020 041fecfb974ed8346b182acc717505e6 465 Gene3D G3DSA:1.20.1250.20 245 449 3.0E-26 T 22-04-2016 APT61_RS04020 041fecfb974ed8346b182acc717505e6 465 PANTHER PTHR23500 15 461 1.2E-235 T 22-04-2016 APT61_RS08060 f6d94d62b8836d6d094973b8064ff8db 124 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 25 93 4.4E-23 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 APT61_RS08060 f6d94d62b8836d6d094973b8064ff8db 124 PANTHER PTHR38766 1 124 1.3E-32 T 22-04-2016 APT61_RS08060 f6d94d62b8836d6d094973b8064ff8db 124 Pfam PF04347 Flagellar biosynthesis protein, FliO 37 119 1.1E-21 T 22-04-2016 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 APT61_RS08060 f6d94d62b8836d6d094973b8064ff8db 124 PANTHER PTHR38766:SF1 1 124 1.3E-32 T 22-04-2016 APT61_RS17300 ddc1be0c9cdea8af2aa16d3573e7b4c2 623 Gene3D G3DSA:3.10.50.40 259 380 4.2E-29 T 22-04-2016 APT61_RS17300 ddc1be0c9cdea8af2aa16d3573e7b4c2 623 Pfam PF13145 PPIC-type PPIASE domain 248 369 4.7E-23 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 APT61_RS17300 ddc1be0c9cdea8af2aa16d3573e7b4c2 623 SUPERFAMILY SSF109998 203 241 6.28E-38 T 22-04-2016 IPR027304 Trigger factor/SurA domain APT61_RS17300 ddc1be0c9cdea8af2aa16d3573e7b4c2 623 SUPERFAMILY SSF109998 40 169 6.28E-38 T 22-04-2016 IPR027304 Trigger factor/SurA domain APT61_RS17300 ddc1be0c9cdea8af2aa16d3573e7b4c2 623 PANTHER PTHR10657 1 175 3.3E-250 T 22-04-2016 APT61_RS17300 ddc1be0c9cdea8af2aa16d3573e7b4c2 623 PANTHER PTHR10657 203 516 3.3E-250 T 22-04-2016 APT61_RS17300 ddc1be0c9cdea8af2aa16d3573e7b4c2 623 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 295 316 - T 22-04-2016 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site APT61_RS17300 ddc1be0c9cdea8af2aa16d3573e7b4c2 623 SUPERFAMILY SSF54534 225 355 3.66E-22 T 22-04-2016 APT61_RS17300 ddc1be0c9cdea8af2aa16d3573e7b4c2 623 Pfam PF13624 SurA N-terminal domain 1 165 5.8E-55 T 22-04-2016 APT61_RS17300 ddc1be0c9cdea8af2aa16d3573e7b4c2 623 PANTHER PTHR10657:SF13 1 175 3.3E-250 T 22-04-2016 APT61_RS17300 ddc1be0c9cdea8af2aa16d3573e7b4c2 623 PANTHER PTHR10657:SF13 203 516 3.3E-250 T 22-04-2016 APT61_RS15720 9a5bbcdd1e6c4ccc488798a37b9e57c3 224 Gene3D G3DSA:2.60.40.360 20 137 1.3E-44 T 22-04-2016 IPR008962 PapD-like APT61_RS15720 9a5bbcdd1e6c4ccc488798a37b9e57c3 224 SUPERFAMILY SSF49584 138 219 1.11E-21 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APT61_RS15720 9a5bbcdd1e6c4ccc488798a37b9e57c3 224 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 159 216 9.1E-13 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APT61_RS15720 9a5bbcdd1e6c4ccc488798a37b9e57c3 224 PRINTS PR00969 Pili chaperone signature 21 30 2.5E-38 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APT61_RS15720 9a5bbcdd1e6c4ccc488798a37b9e57c3 224 PRINTS PR00969 Pili chaperone signature 94 111 2.5E-38 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APT61_RS15720 9a5bbcdd1e6c4ccc488798a37b9e57c3 224 PRINTS PR00969 Pili chaperone signature 154 169 2.5E-38 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APT61_RS15720 9a5bbcdd1e6c4ccc488798a37b9e57c3 224 PRINTS PR00969 Pili chaperone signature 66 87 2.5E-38 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APT61_RS15720 9a5bbcdd1e6c4ccc488798a37b9e57c3 224 PRINTS PR00969 Pili chaperone signature 119 134 2.5E-38 T 22-04-2016 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 APT61_RS15720 9a5bbcdd1e6c4ccc488798a37b9e57c3 224 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 93 110 - T 22-04-2016 IPR018046 Pili assembly chaperone, conserved site APT61_RS15720 9a5bbcdd1e6c4ccc488798a37b9e57c3 224 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 20 137 7.8E-44 T 22-04-2016 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 APT61_RS15720 9a5bbcdd1e6c4ccc488798a37b9e57c3 224 PANTHER PTHR30251:SF9 1 224 9.7E-80 T 22-04-2016 APT61_RS15720 9a5bbcdd1e6c4ccc488798a37b9e57c3 224 SUPERFAMILY SSF49354 16 136 2.88E-42 T 22-04-2016 IPR008962 PapD-like APT61_RS15720 9a5bbcdd1e6c4ccc488798a37b9e57c3 224 Gene3D G3DSA:2.60.40.1070 139 220 3.0E-25 T 22-04-2016 IPR016148 Pili assembly chaperone, C-terminal APT61_RS15720 9a5bbcdd1e6c4ccc488798a37b9e57c3 224 PANTHER PTHR30251 1 224 9.7E-80 T 22-04-2016 APT61_RS07085 2067207392f64c92cd2264d43f1962ee 586 PANTHER PTHR10342 232 566 4.9E-147 T 22-04-2016 APT61_RS07085 2067207392f64c92cd2264d43f1962ee 586 PANTHER PTHR10342:SF215 232 566 4.9E-147 T 22-04-2016 APT61_RS07085 2067207392f64c92cd2264d43f1962ee 586 Gene3D G3DSA:3.40.720.10 261 521 2.2E-31 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APT61_RS07085 2067207392f64c92cd2264d43f1962ee 586 PIRSF PIRSF004950 6 586 1.3E-220 T 22-04-2016 IPR012159 Inner membrane protein YejM APT61_RS07085 2067207392f64c92cd2264d43f1962ee 586 Pfam PF00884 Sulfatase 260 500 1.8E-26 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APT61_RS07085 2067207392f64c92cd2264d43f1962ee 586 SUPERFAMILY SSF53649 257 577 2.75E-53 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APT61_RS07085 2067207392f64c92cd2264d43f1962ee 586 Pfam PF11893 Domain of unknown function (DUF3413) 6 252 3.6E-105 T 22-04-2016 IPR024588 Inner membrane protein YejM, N-terminal APT61_RS01030 84d2285ffd5e89f5610b2039329ca258 331 Pfam PF12146 Serine aminopeptidase, S33 53 313 1.4E-57 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 APT61_RS01030 84d2285ffd5e89f5610b2039329ca258 331 PANTHER PTHR11614:SF100 11 331 1.9E-164 T 22-04-2016 APT61_RS01030 84d2285ffd5e89f5610b2039329ca258 331 SUPERFAMILY SSF53474 251 329 1.07E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS01030 84d2285ffd5e89f5610b2039329ca258 331 SUPERFAMILY SSF53474 32 168 1.07E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS01030 84d2285ffd5e89f5610b2039329ca258 331 PANTHER PTHR11614 11 331 1.9E-164 T 22-04-2016 APT61_RS01030 84d2285ffd5e89f5610b2039329ca258 331 Gene3D G3DSA:3.40.50.1820 28 330 1.3E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS08780 ef2859041108343004ea59a057be0d9e 271 PANTHER PTHR10108 16 200 7.7E-45 T 22-04-2016 APT61_RS08780 ef2859041108343004ea59a057be0d9e 271 Gene3D G3DSA:3.40.50.150 72 206 3.6E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS08780 ef2859041108343004ea59a057be0d9e 271 PANTHER PTHR10108:SF886 16 200 7.7E-45 T 22-04-2016 APT61_RS08780 ef2859041108343004ea59a057be0d9e 271 SUPERFAMILY SSF53335 5 254 2.92E-47 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS08780 ef2859041108343004ea59a057be0d9e 271 PIRSF PIRSF018249 1 270 2.2E-87 T 22-04-2016 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 APT61_RS08780 ef2859041108343004ea59a057be0d9e 271 Pfam PF13649 Methyltransferase domain 89 174 1.4E-12 T 22-04-2016 APT61_RS20965 1cc393a4938e322b8a52dfa545782aa9 165 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 165 24.595 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 APT61_RS20965 1cc393a4938e322b8a52dfa545782aa9 165 Pfam PF04345 Chorismate lyase 16 165 3.0E-32 T 22-04-2016 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|UniPathway: UPA00232 APT61_RS20965 1cc393a4938e322b8a52dfa545782aa9 165 Gene3D G3DSA:3.40.1410.10 6 165 4.1E-55 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APT61_RS20965 1cc393a4938e322b8a52dfa545782aa9 165 PANTHER PTHR38683 1 165 1.4E-63 T 22-04-2016 APT61_RS20965 1cc393a4938e322b8a52dfa545782aa9 165 SUPERFAMILY SSF64288 5 165 2.19E-45 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain APT61_RS19850 eccb6b2b297d0c929b32412117a16154 255 PIRSF PIRSF020736 1 253 1.5E-89 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 APT61_RS19850 eccb6b2b297d0c929b32412117a16154 255 PANTHER PTHR42637 1 255 2.1E-104 T 22-04-2016 APT61_RS19850 eccb6b2b297d0c929b32412117a16154 255 Gene3D G3DSA:1.20.1260.10 105 253 4.1E-87 T 22-04-2016 IPR012347 Ferritin-related APT61_RS19850 eccb6b2b297d0c929b32412117a16154 255 Gene3D G3DSA:1.20.1260.10 5 57 4.1E-87 T 22-04-2016 IPR012347 Ferritin-related APT61_RS19850 eccb6b2b297d0c929b32412117a16154 255 SUPERFAMILY SSF47240 7 57 7.98E-73 T 22-04-2016 IPR009078 Ferritin-like superfamily APT61_RS19850 eccb6b2b297d0c929b32412117a16154 255 SUPERFAMILY SSF47240 105 252 7.98E-73 T 22-04-2016 IPR009078 Ferritin-like superfamily APT61_RS19850 eccb6b2b297d0c929b32412117a16154 255 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 5 248 8.8E-118 T 22-04-2016 IPR010386 tRNA-hydroxylase MiaE KEGG: 00231+1.-.-.-|KEGG: 00592+1.-.-.-|KEGG: 00633+1.-.-.-|KEGG: 00780+1.-.-.-|KEGG: 00860+1.-.-.-|KEGG: 00950+1.-.-.-|KEGG: 00981+1.-.-.-|UniPathway: UPA00729 APT61_RS19850 eccb6b2b297d0c929b32412117a16154 255 PANTHER PTHR42637:SF1 1 255 2.1E-104 T 22-04-2016 APT61_RS16720 f729054a9c4fbf17729a6e201a080582 472 PANTHER PTHR36120:SF1 5 471 6.1E-218 T 22-04-2016 APT61_RS16720 f729054a9c4fbf17729a6e201a080582 472 PANTHER PTHR36120 5 471 6.1E-218 T 22-04-2016 APT61_RS16720 f729054a9c4fbf17729a6e201a080582 472 Pfam PF02952 L-fucose isomerase, C-terminal domain 343 470 1.0E-35 T 22-04-2016 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25|UniPathway: UPA00563 APT61_RS16720 f729054a9c4fbf17729a6e201a080582 472 SUPERFAMILY SSF53743 6 325 1.7E-60 T 22-04-2016 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 APT61_RS20450 6903ede8e5015f24768e735063eebcd7 105 PANTHER PTHR30561:SF0 1 105 2.5E-54 T 22-04-2016 APT61_RS20450 6903ede8e5015f24768e735063eebcd7 105 SUPERFAMILY SSF103481 5 103 1.57E-20 T 22-04-2016 APT61_RS20450 6903ede8e5015f24768e735063eebcd7 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.6E-32 T 22-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 APT61_RS20450 6903ede8e5015f24768e735063eebcd7 105 PANTHER PTHR30561 1 105 2.5E-54 T 22-04-2016 APT61_RS15800 855a595100c560d1471e549a6c3a1adc 150 Gene3D G3DSA:3.90.1170.40 3 150 3.8E-57 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APT61_RS15800 855a595100c560d1471e549a6c3a1adc 150 PANTHER PTHR23404 18 150 1.5E-42 T 22-04-2016 APT61_RS15800 855a595100c560d1471e549a6c3a1adc 150 Pfam PF02391 MoaE protein 11 121 1.4E-36 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APT61_RS15800 855a595100c560d1471e549a6c3a1adc 150 SUPERFAMILY SSF54690 6 150 7.06E-54 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APT61_RS15800 855a595100c560d1471e549a6c3a1adc 150 PANTHER PTHR23404:SF2 18 150 1.5E-42 T 22-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 APT61_RS17880 5adb30bf9777de1ac9d824461d4523ff 190 SUPERFAMILY SSF160904 8 187 9.81E-45 T 22-04-2016 APT61_RS17880 5adb30bf9777de1ac9d824461d4523ff 190 Gene3D G3DSA:1.10.3300.10 7 188 5.4E-49 T 22-04-2016 IPR023286 ABATE domain APT61_RS17880 5adb30bf9777de1ac9d824461d4523ff 190 PANTHER PTHR35525:SF3 5 187 4.4E-41 T 22-04-2016 APT61_RS17880 5adb30bf9777de1ac9d824461d4523ff 190 PANTHER PTHR35525 5 187 4.4E-41 T 22-04-2016 APT61_RS17880 5adb30bf9777de1ac9d824461d4523ff 190 Pfam PF07336 Putative stress-induced transcription regulator 15 140 7.3E-21 T 22-04-2016 IPR010852 Putative stress-induced transcription regulator APT61_RS17880 5adb30bf9777de1ac9d824461d4523ff 190 Pfam PF11706 CGNR zinc finger 146 188 3.9E-18 T 22-04-2016 IPR021005 Zinc finger, CGNR APT61_RS19995 4429471cec4477632ea735f02f0521f3 99 TIGRFAM TIGR03578 EF_0831: conserved hypothetical protein EF_0831/AHA_3912 2 96 8.4E-43 T 22-04-2016 IPR020037 Protein of unknown function DUF4312 APT61_RS19995 4429471cec4477632ea735f02f0521f3 99 Pfam PF14189 Domain of unknown function (DUF4312) 5 88 8.2E-36 T 22-04-2016 IPR020037 Protein of unknown function DUF4312 APT61_RS12685 61f56001539ac58f2c3bd06a9d4c3c43 115 PIRSF PIRSF005894 1 108 1.3E-52 T 22-04-2016 IPR014434 Monothiol glutaredoxin APT61_RS12685 61f56001539ac58f2c3bd06a9d4c3c43 115 SUPERFAMILY SSF52833 2 104 8.57E-36 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS12685 61f56001539ac58f2c3bd06a9d4c3c43 115 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 3.7E-47 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related APT61_RS12685 61f56001539ac58f2c3bd06a9d4c3c43 115 Pfam PF00462 Glutaredoxin 17 81 1.1E-18 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APT61_RS12685 61f56001539ac58f2c3bd06a9d4c3c43 115 PANTHER PTHR10293 2 111 1.7E-60 T 22-04-2016 IPR004480 Monothiol glutaredoxin-related APT61_RS12685 61f56001539ac58f2c3bd06a9d4c3c43 115 Gene3D G3DSA:3.40.30.10 8 102 8.5E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS21380 ef29f7b8acf91952718d2580002c5774 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 4.5E-213 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21380 ef29f7b8acf91952718d2580002c5774 689 Gene3D G3DSA:1.10.730.10 581 678 1.5E-4 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS21380 ef29f7b8acf91952718d2580002c5774 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21380 ef29f7b8acf91952718d2580002c5774 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 9.9E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21380 ef29f7b8acf91952718d2580002c5774 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 9.9E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21380 ef29f7b8acf91952718d2580002c5774 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 9.9E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21380 ef29f7b8acf91952718d2580002c5774 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 9.9E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21380 ef29f7b8acf91952718d2580002c5774 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 9.9E-37 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21380 ef29f7b8acf91952718d2580002c5774 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 26.795 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 APT61_RS21380 ef29f7b8acf91952718d2580002c5774 689 SUPERFAMILY SSF109604 339 537 7.14E-18 T 22-04-2016 APT61_RS21380 ef29f7b8acf91952718d2580002c5774 689 Pfam PF05746 DALR anticodon binding domain 582 679 3.7E-8 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 APT61_RS21380 ef29f7b8acf91952718d2580002c5774 689 PANTHER PTHR30075 1 689 0.0 T 22-04-2016 APT61_RS14840 43b7e06da4a9c0c0d94277da36936f05 381 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 3.0E-187 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 APT61_RS14840 43b7e06da4a9c0c0d94277da36936f05 381 PANTHER PTHR30011 1 378 5.6E-213 T 22-04-2016 APT61_RS14840 43b7e06da4a9c0c0d94277da36936f05 381 Pfam PF00296 Luciferase-like monooxygenase 4 326 3.5E-85 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS14840 43b7e06da4a9c0c0d94277da36936f05 381 Gene3D G3DSA:3.20.20.30 287 350 5.3E-103 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS14840 43b7e06da4a9c0c0d94277da36936f05 381 Gene3D G3DSA:3.20.20.30 3 253 5.3E-103 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS14840 43b7e06da4a9c0c0d94277da36936f05 381 SUPERFAMILY SSF51679 3 349 7.07E-96 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 APT61_RS14840 43b7e06da4a9c0c0d94277da36936f05 381 PANTHER PTHR30011:SF1 1 378 5.6E-213 T 22-04-2016 APT61_RS14840 43b7e06da4a9c0c0d94277da36936f05 381 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 379 69.332 T 22-04-2016 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 APT61_RS02750 56331d7f4685b967a9e24a7f50de741a 477 PANTHER PTHR30023 23 473 4.2E-141 T 22-04-2016 APT61_RS02750 56331d7f4685b967a9e24a7f50de741a 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 1.9E-37 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APT61_RS02750 56331d7f4685b967a9e24a7f50de741a 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 286 308 1.9E-37 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APT61_RS02750 56331d7f4685b967a9e24a7f50de741a 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 1.9E-37 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APT61_RS02750 56331d7f4685b967a9e24a7f50de741a 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 1.9E-37 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APT61_RS02750 56331d7f4685b967a9e24a7f50de741a 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 1.9E-37 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APT61_RS02750 56331d7f4685b967a9e24a7f50de741a 477 SUPERFAMILY SSF56601 23 473 9.74E-99 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS02750 56331d7f4685b967a9e24a7f50de741a 477 PANTHER PTHR30023:SF0 23 473 4.2E-141 T 22-04-2016 APT61_RS02750 56331d7f4685b967a9e24a7f50de741a 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 20 468 2.3E-165 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APT61_RS02750 56331d7f4685b967a9e24a7f50de741a 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 47 447 5.8E-174 T 22-04-2016 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 APT61_RS02750 56331d7f4685b967a9e24a7f50de741a 477 Gene3D G3DSA:3.40.710.10 227 455 1.3E-66 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS18950 8340a7a4a01635f4b06a9b2d101b0bd0 301 SUPERFAMILY SSF46785 7 87 3.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18950 8340a7a4a01635f4b06a9b2d101b0bd0 301 PANTHER PTHR30537 1 297 5.6E-102 T 22-04-2016 APT61_RS18950 8340a7a4a01635f4b06a9b2d101b0bd0 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 8.5E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS18950 8340a7a4a01635f4b06a9b2d101b0bd0 301 Gene3D G3DSA:3.40.190.10 94 178 5.9E-23 T 22-04-2016 APT61_RS18950 8340a7a4a01635f4b06a9b2d101b0bd0 301 Gene3D G3DSA:1.10.10.10 7 86 2.3E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18950 8340a7a4a01635f4b06a9b2d101b0bd0 301 PANTHER PTHR30537:SF5 1 297 5.6E-102 T 22-04-2016 APT61_RS18950 8340a7a4a01635f4b06a9b2d101b0bd0 301 SUPERFAMILY SSF53850 93 297 2.79E-42 T 22-04-2016 APT61_RS18950 8340a7a4a01635f4b06a9b2d101b0bd0 301 Gene3D G3DSA:3.40.190.10 179 262 1.3E-22 T 22-04-2016 APT61_RS18950 8340a7a4a01635f4b06a9b2d101b0bd0 301 Pfam PF03466 LysR substrate binding domain 92 297 6.0E-42 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS15480 9bcd459832415841e3719a7b9a57dc8b 282 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 20 282 4.2E-102 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 APT61_RS15480 9bcd459832415841e3719a7b9a57dc8b 282 PANTHER PTHR32502:SF7 3 282 6.8E-170 T 22-04-2016 APT61_RS15480 9bcd459832415841e3719a7b9a57dc8b 282 PANTHER PTHR32502 3 282 6.8E-170 T 22-04-2016 APT61_RS04380 22bf9fd839d9b4677079c47fdd2a0ef2 158 SUPERFAMILY SSF55729 8 137 1.11E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS04380 22bf9fd839d9b4677079c47fdd2a0ef2 158 Gene3D G3DSA:3.40.630.30 8 133 3.8E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS04380 22bf9fd839d9b4677079c47fdd2a0ef2 158 Pfam PF13673 Acetyltransferase (GNAT) domain 49 133 1.8E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS18255 c3260b25d21e47edfa0a878297b7ab6a 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 APT61_RS18255 c3260b25d21e47edfa0a878297b7ab6a 283 Gene3D G3DSA:1.10.8.10 2 55 7.0E-28 T 22-04-2016 APT61_RS18255 c3260b25d21e47edfa0a878297b7ab6a 283 PANTHER PTHR11741 1 283 4.4E-144 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APT61_RS18255 c3260b25d21e47edfa0a878297b7ab6a 283 Gene3D G3DSA:1.10.286.20 183 226 5.7E-20 T 22-04-2016 APT61_RS18255 c3260b25d21e47edfa0a878297b7ab6a 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 79.619 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APT61_RS18255 c3260b25d21e47edfa0a878297b7ab6a 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 282 5.6E-121 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 APT61_RS18255 c3260b25d21e47edfa0a878297b7ab6a 283 SUPERFAMILY SSF54713 142 281 1.74E-53 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APT61_RS18255 c3260b25d21e47edfa0a878297b7ab6a 283 Pfam PF00889 Elongation factor TS 71 263 2.0E-66 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APT61_RS18255 c3260b25d21e47edfa0a878297b7ab6a 283 SUPERFAMILY SSF46934 4 54 2.24E-18 T 22-04-2016 IPR009060 UBA-like GO:0005515 APT61_RS18255 c3260b25d21e47edfa0a878297b7ab6a 283 SUPERFAMILY SSF54713 56 139 2.4E-20 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APT61_RS18255 c3260b25d21e47edfa0a878297b7ab6a 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 APT61_RS18255 c3260b25d21e47edfa0a878297b7ab6a 283 Gene3D G3DSA:3.30.479.20 227 262 2.4E-31 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APT61_RS18255 c3260b25d21e47edfa0a878297b7ab6a 283 Gene3D G3DSA:3.30.479.20 142 178 2.4E-31 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 APT61_RS01765 aa225f267b1c145a876a77b5a7608d92 711 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 704 0.0 T 22-04-2016 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 APT61_RS01765 aa225f267b1c145a876a77b5a7608d92 711 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 32 697 0.0 T 22-04-2016 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 APT61_RS08980 06553fc03e1f5d63d4db52b8140d3e20 398 Gene3D G3DSA:1.20.1250.20 213 389 5.1E-11 T 22-04-2016 APT61_RS08980 06553fc03e1f5d63d4db52b8140d3e20 398 Gene3D G3DSA:1.20.1250.20 19 200 1.9E-28 T 22-04-2016 APT61_RS08980 06553fc03e1f5d63d4db52b8140d3e20 398 SUPERFAMILY SSF103473 10 390 5.75E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS08980 06553fc03e1f5d63d4db52b8140d3e20 398 PANTHER PTHR23501:SF90 7 393 1.7E-107 T 22-04-2016 APT61_RS08980 06553fc03e1f5d63d4db52b8140d3e20 398 PANTHER PTHR23501 7 393 1.7E-107 T 22-04-2016 APT61_RS08980 06553fc03e1f5d63d4db52b8140d3e20 398 Pfam PF07690 Major Facilitator Superfamily 25 354 5.2E-30 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS15855 598fda4b4c938ea02c8b84be263f1656 346 SMART SM00729 43 255 2.8E-41 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 APT61_RS15855 598fda4b4c938ea02c8b84be263f1656 346 PANTHER PTHR22976 4 346 9.2E-198 T 22-04-2016 APT61_RS15855 598fda4b4c938ea02c8b84be263f1656 346 Gene3D G3DSA:3.20.20.70 6 314 8.0E-105 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS15855 598fda4b4c938ea02c8b84be263f1656 346 Pfam PF04055 Radical SAM superfamily 50 201 6.1E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS15855 598fda4b4c938ea02c8b84be263f1656 346 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.479 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APT61_RS15855 598fda4b4c938ea02c8b84be263f1656 346 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 6.8E-20 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APT61_RS15855 598fda4b4c938ea02c8b84be263f1656 346 PIRSF PIRSF001619 1 319 4.2E-139 T 22-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APT61_RS15855 598fda4b4c938ea02c8b84be263f1656 346 TIGRFAM TIGR00433 bioB: biotin synthase 15 310 2.8E-124 T 22-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APT61_RS15855 598fda4b4c938ea02c8b84be263f1656 346 PANTHER PTHR22976:SF1 4 346 9.2E-198 T 22-04-2016 APT61_RS15855 598fda4b4c938ea02c8b84be263f1656 346 SMART SM00876 220 312 1.0E-47 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 APT61_RS15855 598fda4b4c938ea02c8b84be263f1656 346 SUPERFAMILY SSF102114 5 313 1.28E-93 T 22-04-2016 APT61_RS03205 1c9b08663b358d9e1a51ea7b56c21cfe 155 Pfam PF03500 Cellulose synthase subunit D 38 130 1.2E-10 T 22-04-2016 IPR022798 Cellulose synthase subunit D, bacterial UniPathway: UPA00694 APT61_RS06295 a2877f9421c1451a74e8f98521897eb5 191 Pfam PF06572 Protein of unknown function (DUF1131) 24 190 2.9E-78 T 22-04-2016 IPR010938 Protein of unknown function DUF1131 APT61_RS06295 a2877f9421c1451a74e8f98521897eb5 191 Gene3D G3DSA:2.60.460.10 26 191 7.1E-77 T 22-04-2016 APT61_RS06295 a2877f9421c1451a74e8f98521897eb5 191 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 1 191 6.0E-74 T 22-04-2016 IPR010938 Protein of unknown function DUF1131 APT61_RS03690 26782356ececc402dc30fae653c70f1c 245 PANTHER PTHR10434 1 245 6.8E-172 T 22-04-2016 APT61_RS03690 26782356ececc402dc30fae653c70f1c 245 SUPERFAMILY SSF69593 2 241 4.58E-61 T 22-04-2016 APT61_RS03690 26782356ececc402dc30fae653c70f1c 245 PANTHER PTHR10434:SF20 1 245 6.8E-172 T 22-04-2016 APT61_RS03690 26782356ececc402dc30fae653c70f1c 245 Gene3D G3DSA:3.40.1130.10 56 213 8.5E-15 T 22-04-2016 APT61_RS03690 26782356ececc402dc30fae653c70f1c 245 SMART SM00563 67 182 2.6E-39 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APT61_RS03690 26782356ececc402dc30fae653c70f1c 245 Pfam PF01553 Acyltransferase 58 180 6.9E-31 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APT61_RS03690 26782356ececc402dc30fae653c70f1c 245 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 1.5E-49 T 22-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 APT61_RS10480 f64a0506d3b69d4a31feb8c3e1798deb 79 Pfam PF10798 Biofilm development protein YmgB/AriR 26 66 5.1E-6 T 22-04-2016 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 APT61_RS22020 f744ca0e1ce040372d751f9caf0cf338 136 SUPERFAMILY SSF49764 30 136 7.67E-20 T 22-04-2016 IPR008978 HSP20-like chaperone APT61_RS22020 f744ca0e1ce040372d751f9caf0cf338 136 Pfam PF00011 Hsp20/alpha crystallin family 41 136 8.4E-23 T 22-04-2016 IPR002068 Alpha crystallin/Hsp20 domain APT61_RS22020 f744ca0e1ce040372d751f9caf0cf338 136 PANTHER PTHR11527:SF122 1 136 8.0E-44 T 22-04-2016 APT61_RS22020 f744ca0e1ce040372d751f9caf0cf338 136 PANTHER PTHR11527 1 136 8.0E-44 T 22-04-2016 IPR031107 Small heat shock protein HSP20 APT61_RS22020 f744ca0e1ce040372d751f9caf0cf338 136 Gene3D G3DSA:2.60.40.790 4 136 1.6E-17 T 22-04-2016 IPR008978 HSP20-like chaperone APT61_RS22020 f744ca0e1ce040372d751f9caf0cf338 136 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 136 48.691 T 22-04-2016 IPR023728 Small heat shock protein IbpA APT61_RS20160 d9fa1933046ae7ac2777b0b018c3c54d 274 SUPERFAMILY SSF46689 222 271 7.17E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS20160 d9fa1933046ae7ac2777b0b018c3c54d 274 SUPERFAMILY SSF46689 170 219 7.62E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS20160 d9fa1933046ae7ac2777b0b018c3c54d 274 Pfam PF02311 AraC-like ligand binding domain 24 137 1.0E-21 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS20160 d9fa1933046ae7ac2777b0b018c3c54d 274 PANTHER PTHR11019 10 274 7.9E-52 T 22-04-2016 APT61_RS20160 d9fa1933046ae7ac2777b0b018c3c54d 274 Gene3D G3DSA:1.10.10.60 224 270 1.7E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS20160 d9fa1933046ae7ac2777b0b018c3c54d 274 SMART SM00342 186 268 1.3E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS20160 d9fa1933046ae7ac2777b0b018c3c54d 274 PANTHER PTHR11019:SF75 10 274 7.9E-52 T 22-04-2016 APT61_RS20160 d9fa1933046ae7ac2777b0b018c3c54d 274 Gene3D G3DSA:2.60.120.280 34 132 9.7E-10 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS20160 d9fa1933046ae7ac2777b0b018c3c54d 274 Pfam PF12833 Helix-turn-helix domain 192 269 5.6E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS20160 d9fa1933046ae7ac2777b0b018c3c54d 274 SUPERFAMILY SSF51215 32 139 1.44E-15 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 APT61_RS20160 d9fa1933046ae7ac2777b0b018c3c54d 274 Gene3D G3DSA:1.10.10.60 169 223 2.0E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS06140 e46d023821e598e9aa92b9ad56e23495 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 47.15 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APT61_RS06140 e46d023821e598e9aa92b9ad56e23495 345 SUPERFAMILY SSF56042 171 341 4.19E-64 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS06140 e46d023821e598e9aa92b9ad56e23495 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 164 4.3E-15 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APT61_RS06140 e46d023821e598e9aa92b9ad56e23495 345 Gene3D G3DSA:3.30.1330.10 22 170 9.4E-63 T 22-04-2016 IPR016188 PurM-like, N-terminal domain APT61_RS06140 e46d023821e598e9aa92b9ad56e23495 345 Gene3D G3DSA:3.90.650.10 171 343 2.8E-69 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS06140 e46d023821e598e9aa92b9ad56e23495 345 PANTHER PTHR10520 4 333 6.7E-226 T 22-04-2016 APT61_RS06140 e46d023821e598e9aa92b9ad56e23495 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 340 3.9E-39 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain APT61_RS06140 e46d023821e598e9aa92b9ad56e23495 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 4.1E-154 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 APT61_RS06140 e46d023821e598e9aa92b9ad56e23495 345 SUPERFAMILY SSF55326 7 170 8.97E-53 T 22-04-2016 APT61_RS17450 50d1eb38f4f9237cfcd554b577df8491 226 PANTHER PTHR30363:SF7 1 130 1.9E-61 T 22-04-2016 APT61_RS17450 50d1eb38f4f9237cfcd554b577df8491 226 Gene3D G3DSA:1.10.10.10 1 63 3.9E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS17450 50d1eb38f4f9237cfcd554b577df8491 226 PANTHER PTHR30363 1 130 1.9E-61 T 22-04-2016 APT61_RS17450 50d1eb38f4f9237cfcd554b577df8491 226 Pfam PF13280 WYL domain 139 224 5.2E-18 T 22-04-2016 IPR026881 WYL domain APT61_RS17450 50d1eb38f4f9237cfcd554b577df8491 226 Pfam PF08279 HTH domain 7 60 1.1E-16 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 APT61_RS17450 50d1eb38f4f9237cfcd554b577df8491 226 SUPERFAMILY SSF46785 5 62 3.18E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS15000 b2900112a57b1d26f64a53d0c88973ff 246 Pfam PF13353 4Fe-4S single cluster domain 16 140 1.0E-17 T 22-04-2016 APT61_RS15000 b2900112a57b1d26f64a53d0c88973ff 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 APT61_RS15000 b2900112a57b1d26f64a53d0c88973ff 246 Gene3D G3DSA:3.80.30.10 69 246 1.9E-69 T 22-04-2016 APT61_RS15000 b2900112a57b1d26f64a53d0c88973ff 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 4.2E-106 T 22-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 APT61_RS15000 b2900112a57b1d26f64a53d0c88973ff 246 Pfam PF04055 Radical SAM superfamily 24 178 3.4E-31 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 APT61_RS15000 b2900112a57b1d26f64a53d0c88973ff 246 SUPERFAMILY SSF102114 23 217 1.29E-23 T 22-04-2016 APT61_RS15000 b2900112a57b1d26f64a53d0c88973ff 246 PANTHER PTHR30352:SF9 1 246 8.1E-156 T 22-04-2016 APT61_RS15000 b2900112a57b1d26f64a53d0c88973ff 246 PANTHER PTHR30352 1 246 8.1E-156 T 22-04-2016 APT61_RS13765 028cf9640bc0aadd6acdb5bb8d295b0e 901 SUPERFAMILY SSF53098 717 899 7.59E-22 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS13765 028cf9640bc0aadd6acdb5bb8d295b0e 901 Pfam PF16473 3' exoribonuclease, RNase T-like 717 895 8.8E-54 T 22-04-2016 IPR033390 3'-5' exoribonuclease Rv2179c-like domain APT61_RS13765 028cf9640bc0aadd6acdb5bb8d295b0e 901 Pfam PF06630 Enterobacterial exodeoxyribonuclease VIII 4 106 1.4E-21 T 22-04-2016 IPR010584 Exodeoxyribonuclease 8 GO:0051908|GO:0090305 APT61_RS13765 028cf9640bc0aadd6acdb5bb8d295b0e 901 Gene3D G3DSA:3.30.420.10 790 888 6.0E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS09545 3b16b3820053280799c8bdf9e7bd16e0 348 PANTHER PTHR33209 2 348 6.4E-211 T 22-04-2016 APT61_RS09545 3b16b3820053280799c8bdf9e7bd16e0 348 Pfam PF01343 Peptidase family S49 160 308 4.5E-48 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 APT61_RS09545 3b16b3820053280799c8bdf9e7bd16e0 348 SUPERFAMILY SSF52096 239 298 1.09E-33 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS09545 3b16b3820053280799c8bdf9e7bd16e0 348 SUPERFAMILY SSF52096 95 208 1.09E-33 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS09545 3b16b3820053280799c8bdf9e7bd16e0 348 Gene3D G3DSA:3.90.226.10 270 303 5.6E-38 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS09545 3b16b3820053280799c8bdf9e7bd16e0 348 Gene3D G3DSA:3.90.226.10 97 204 5.6E-38 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS09545 3b16b3820053280799c8bdf9e7bd16e0 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 2.7E-59 T 22-04-2016 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 APT61_RS09545 3b16b3820053280799c8bdf9e7bd16e0 348 PANTHER PTHR33209:SF2 2 348 6.4E-211 T 22-04-2016 APT61_RS01415 7ad1782a8c393d1b052c38c6b246edaf 353 SUPERFAMILY SSF53335 96 340 7.89E-42 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS01415 7ad1782a8c393d1b052c38c6b246edaf 353 Pfam PF00891 O-methyltransferase 179 332 5.2E-17 T 22-04-2016 IPR001077 O-methyltransferase, family 2 GO:0008171 APT61_RS01415 7ad1782a8c393d1b052c38c6b246edaf 353 Gene3D G3DSA:3.40.50.150 97 345 5.1E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS01415 7ad1782a8c393d1b052c38c6b246edaf 353 PANTHER PTHR11746 1 284 5.9E-17 T 22-04-2016 APT61_RS20815 8c3c2fa493439859a2c478e49d9fba2e 136 Pfam PF03788 LrgA family 31 122 1.5E-25 T 22-04-2016 IPR005538 LrgA/CidA family GO:0016021 APT61_RS20815 8c3c2fa493439859a2c478e49d9fba2e 136 PANTHER PTHR33931 7 133 3.6E-58 T 22-04-2016 APT61_RS20815 8c3c2fa493439859a2c478e49d9fba2e 136 PANTHER PTHR33931:SF3 7 133 3.6E-58 T 22-04-2016 APT61_RS08710 e27256cc3324f69ccd7ebd2789e9fd71 877 PANTHER PTHR30462 1 877 0.0 T 22-04-2016 APT61_RS08710 e27256cc3324f69ccd7ebd2789e9fd71 877 Pfam PF02470 MlaD protein 748 809 3.9E-8 T 22-04-2016 IPR003399 Mce/MlaD APT61_RS08710 e27256cc3324f69ccd7ebd2789e9fd71 877 Pfam PF02470 MlaD protein 280 351 4.3E-8 T 22-04-2016 IPR003399 Mce/MlaD APT61_RS08710 e27256cc3324f69ccd7ebd2789e9fd71 877 Pfam PF02470 MlaD protein 46 137 1.9E-16 T 22-04-2016 IPR003399 Mce/MlaD APT61_RS08710 e27256cc3324f69ccd7ebd2789e9fd71 877 Pfam PF02470 MlaD protein 635 724 4.9E-11 T 22-04-2016 IPR003399 Mce/MlaD APT61_RS08710 e27256cc3324f69ccd7ebd2789e9fd71 877 Pfam PF02470 MlaD protein 163 220 4.4E-6 T 22-04-2016 IPR003399 Mce/MlaD APT61_RS08710 e27256cc3324f69ccd7ebd2789e9fd71 877 PANTHER PTHR30462:SF0 1 877 0.0 T 22-04-2016 APT61_RS01045 1c310042ffe7c44a150b1a3e955a2ebd 317 Gene3D G3DSA:3.40.190.10 90 177 4.9E-14 T 22-04-2016 APT61_RS01045 1c310042ffe7c44a150b1a3e955a2ebd 317 SUPERFAMILY SSF46785 2 109 2.72E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01045 1c310042ffe7c44a150b1a3e955a2ebd 317 Gene3D G3DSA:1.10.10.10 1 86 2.0E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS01045 1c310042ffe7c44a150b1a3e955a2ebd 317 PANTHER PTHR30126 1 303 5.1E-198 T 22-04-2016 APT61_RS01045 1c310042ffe7c44a150b1a3e955a2ebd 317 Pfam PF03466 LysR substrate binding domain 86 288 6.5E-42 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS01045 1c310042ffe7c44a150b1a3e955a2ebd 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 4.6E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS01045 1c310042ffe7c44a150b1a3e955a2ebd 317 SUPERFAMILY SSF53850 88 291 1.09E-39 T 22-04-2016 APT61_RS01045 1c310042ffe7c44a150b1a3e955a2ebd 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS01045 1c310042ffe7c44a150b1a3e955a2ebd 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS01045 1c310042ffe7c44a150b1a3e955a2ebd 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.1E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS01045 1c310042ffe7c44a150b1a3e955a2ebd 317 Gene3D G3DSA:3.40.190.10 178 253 8.0E-20 T 22-04-2016 APT61_RS01045 1c310042ffe7c44a150b1a3e955a2ebd 317 PANTHER PTHR30126:SF25 1 303 5.1E-198 T 22-04-2016 APT61_RS05525 81317c378a0afd6bfbbccbf3dd9c63a1 408 Gene3D G3DSA:1.10.443.10 215 383 2.2E-21 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS05525 81317c378a0afd6bfbbccbf3dd9c63a1 408 Gene3D G3DSA:1.10.150.130 105 204 2.9E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal APT61_RS05525 81317c378a0afd6bfbbccbf3dd9c63a1 408 PANTHER PTHR30629:SF2 2 399 4.2E-157 T 22-04-2016 APT61_RS05525 81317c378a0afd6bfbbccbf3dd9c63a1 408 SUPERFAMILY SSF56349 105 387 5.89E-53 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APT61_RS05525 81317c378a0afd6bfbbccbf3dd9c63a1 408 Pfam PF13356 Domain of unknown function (DUF4102) 8 95 1.9E-14 T 22-04-2016 IPR025166 Domain of unknown function DUF4102 APT61_RS05525 81317c378a0afd6bfbbccbf3dd9c63a1 408 Pfam PF00589 Phage integrase family 214 377 2.6E-29 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS05525 81317c378a0afd6bfbbccbf3dd9c63a1 408 PANTHER PTHR30629 2 399 4.2E-157 T 22-04-2016 APT61_RS13465 b7f7dcfdd1fba80f45b5ed2d6e75cb04 236 Pfam PF00117 Glutamine amidotransferase class-I 32 211 4.9E-13 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APT61_RS13465 b7f7dcfdd1fba80f45b5ed2d6e75cb04 236 Gene3D G3DSA:3.40.50.880 8 236 1.1E-40 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS13465 b7f7dcfdd1fba80f45b5ed2d6e75cb04 236 PANTHER PTHR11550 81 212 1.3E-35 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 APT61_RS13465 b7f7dcfdd1fba80f45b5ed2d6e75cb04 236 SUPERFAMILY SSF52317 9 235 8.25E-41 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS10560 d66b5929023f279046166c74fcbdfe94 326 PANTHER PTHR22572:SF13 43 142 2.2E-67 T 22-04-2016 APT61_RS10560 d66b5929023f279046166c74fcbdfe94 326 PANTHER PTHR22572:SF13 197 299 2.2E-67 T 22-04-2016 APT61_RS10560 d66b5929023f279046166c74fcbdfe94 326 PANTHER PTHR22572 43 142 2.2E-67 T 22-04-2016 APT61_RS10560 d66b5929023f279046166c74fcbdfe94 326 PANTHER PTHR22572 197 299 2.2E-67 T 22-04-2016 APT61_RS10560 d66b5929023f279046166c74fcbdfe94 326 SUPERFAMILY SSF51161 6 313 5.14E-59 T 22-04-2016 IPR011004 Trimeric LpxA-like APT61_RS10560 d66b5929023f279046166c74fcbdfe94 326 Gene3D G3DSA:2.160.10.10 51 132 2.1E-26 T 22-04-2016 APT61_RS10560 d66b5929023f279046166c74fcbdfe94 326 Gene3D G3DSA:2.160.10.10 242 301 2.1E-26 T 22-04-2016 APT61_RS00205 07c8c64d40955fe8727b1f1cf819a3ec 674 SUPERFAMILY SSF51445 230 579 8.04E-53 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS00205 07c8c64d40955fe8727b1f1cf819a3ec 674 PANTHER PTHR22762:SF90 111 666 3.2E-277 T 22-04-2016 APT61_RS00205 07c8c64d40955fe8727b1f1cf819a3ec 674 Pfam PF01055 Glycosyl hydrolases family 31 226 660 2.7E-74 T 22-04-2016 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 APT61_RS00205 07c8c64d40955fe8727b1f1cf819a3ec 674 SUPERFAMILY SSF74650 60 222 9.42E-21 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 APT61_RS00205 07c8c64d40955fe8727b1f1cf819a3ec 674 SUPERFAMILY SSF51011 581 659 2.16E-21 T 22-04-2016 APT61_RS00205 07c8c64d40955fe8727b1f1cf819a3ec 674 PANTHER PTHR22762 111 666 3.2E-277 T 22-04-2016 APT61_RS06490 7d54e98c01500d8468b5d4d603634891 413 Pfam PF00155 Aminotransferase class I and II 37 386 4.8E-60 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS06490 7d54e98c01500d8468b5d4d603634891 413 Gene3D G3DSA:3.90.1150.10 264 395 4.1E-44 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS06490 7d54e98c01500d8468b5d4d603634891 413 SUPERFAMILY SSF53383 9 394 1.75E-106 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS06490 7d54e98c01500d8468b5d4d603634891 413 PANTHER PTHR11751:SF302 18 402 7.0E-270 T 22-04-2016 APT61_RS06490 7d54e98c01500d8468b5d4d603634891 413 Gene3D G3DSA:3.40.640.10 50 263 7.0E-62 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS06490 7d54e98c01500d8468b5d4d603634891 413 PANTHER PTHR11751 18 402 7.0E-270 T 22-04-2016 APT61_RS09785 e31e8165f206d7c248beaff9e2a98250 301 PANTHER PTHR10366:SF475 2 292 1.7E-80 T 22-04-2016 APT61_RS09785 e31e8165f206d7c248beaff9e2a98250 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 217 1.0E-17 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 APT61_RS09785 e31e8165f206d7c248beaff9e2a98250 301 Gene3D G3DSA:3.40.50.720 1 234 1.5E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS09785 e31e8165f206d7c248beaff9e2a98250 301 PANTHER PTHR10366 2 292 1.7E-80 T 22-04-2016 APT61_RS09785 e31e8165f206d7c248beaff9e2a98250 301 SUPERFAMILY SSF51735 1 281 1.86E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11730 5d1c6256ffb7f63b7b7eb169a7bf2e0f 109 Pfam PF06932 Protein of unknown function (DUF1283) 28 109 1.6E-40 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 APT61_RS11730 5d1c6256ffb7f63b7b7eb169a7bf2e0f 109 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 4 109 3.0E-44 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 APT61_RS11730 5d1c6256ffb7f63b7b7eb169a7bf2e0f 109 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 1 109 26.233 T 22-04-2016 IPR009700 Protein of unknown function DUF1283 APT61_RS19335 537af5e19491b0a6dc526ef9729ada95 448 PANTHER PTHR11662 16 436 2.9E-265 T 22-04-2016 APT61_RS19335 537af5e19491b0a6dc526ef9729ada95 448 SUPERFAMILY SSF103473 10 437 6.54E-85 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS19335 537af5e19491b0a6dc526ef9729ada95 448 Pfam PF07690 Major Facilitator Superfamily 28 394 1.2E-47 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS19335 537af5e19491b0a6dc526ef9729ada95 448 Gene3D G3DSA:1.20.1250.20 20 220 3.1E-44 T 22-04-2016 APT61_RS19335 537af5e19491b0a6dc526ef9729ada95 448 Gene3D G3DSA:1.20.1250.20 249 429 2.5E-22 T 22-04-2016 APT61_RS19335 537af5e19491b0a6dc526ef9729ada95 448 PANTHER PTHR11662:SF267 16 436 2.9E-265 T 22-04-2016 APT61_RS19335 537af5e19491b0a6dc526ef9729ada95 448 TIGRFAM TIGR02332 HpaX: 4-hydroxyphenylacetate permease 16 420 9.1E-255 T 22-04-2016 IPR012707 4-hydroxyphenylacetate permease GO:1900754|GO:1901241 APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 5.4E-35 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.33 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 Gene3D G3DSA:3.30.1360.120 1 121 9.4E-43 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 Pfam PF01926 50S ribosome-binding GTPase 218 308 2.3E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 372 9.1E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 SUPERFAMILY SSF52540 72 152 1.29E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 SUPERFAMILY SSF52540 188 372 1.29E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 Gene3D G3DSA:1.20.120.430 248 271 1.0E-59 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 Gene3D G3DSA:1.20.120.430 122 182 1.0E-59 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 Gene3D G3DSA:1.20.120.430 384 454 1.0E-59 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 2.9E-99 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 Gene3D G3DSA:3.40.50.300 286 375 1.5E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 PANTHER PTHR11649:SF56 8 454 1.3E-178 T 22-04-2016 APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 Gene3D G3DSA:3.40.50.300 194 247 2.1E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 SUPERFAMILY SSF116878 379 454 2.09E-51 T 22-04-2016 APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 SUPERFAMILY SSF116878 121 220 2.09E-51 T 22-04-2016 APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 PANTHER PTHR11649 8 454 1.3E-178 T 22-04-2016 APT61_RS22100 620b3c7273f22a20c1f15f1cd97599db 454 Pfam PF12631 MnmE helical domain 123 451 2.0E-61 T 22-04-2016 IPR025867 MnmE, helical domain APT61_RS12585 b279b15614bb9c41d3901395f805fe41 201 Gene3D G3DSA:3.40.30.10 1 89 1.1E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS12585 b279b15614bb9c41d3901395f805fe41 201 SUPERFAMILY SSF47616 83 199 3.34E-30 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS12585 b279b15614bb9c41d3901395f805fe41 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 1.4E-15 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal APT61_RS12585 b279b15614bb9c41d3901395f805fe41 201 SUPERFAMILY SSF52833 1 75 1.69E-16 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS12585 b279b15614bb9c41d3901395f805fe41 201 Pfam PF13409 Glutathione S-transferase, N-terminal domain 14 74 1.1E-8 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APT61_RS12585 b279b15614bb9c41d3901395f805fe41 201 Gene3D G3DSA:1.20.1050.10 90 188 1.9E-40 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS12585 b279b15614bb9c41d3901395f805fe41 201 PANTHER PTHR11260:SF154 1 196 1.4E-128 T 22-04-2016 APT61_RS12585 b279b15614bb9c41d3901395f805fe41 201 PANTHER PTHR11260 1 196 1.4E-128 T 22-04-2016 APT61_RS09780 0f6b0b3e3ce953764e415b6164c310bc 538 Gene3D G3DSA:3.90.76.10 45 217 5.7E-48 T 22-04-2016 APT61_RS09780 0f6b0b3e3ce953764e415b6164c310bc 538 PANTHER PTHR30290:SF23 19 538 0.0 T 22-04-2016 APT61_RS09780 0f6b0b3e3ce953764e415b6164c310bc 538 Gene3D G3DSA:3.10.105.10 292 506 7.8E-63 T 22-04-2016 APT61_RS09780 0f6b0b3e3ce953764e415b6164c310bc 538 PANTHER PTHR30290 19 538 0.0 T 22-04-2016 APT61_RS09780 0f6b0b3e3ce953764e415b6164c310bc 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 78 454 1.1E-85 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS09780 0f6b0b3e3ce953764e415b6164c310bc 538 SUPERFAMILY SSF53850 32 532 2.5E-139 T 22-04-2016 APT61_RS09780 0f6b0b3e3ce953764e415b6164c310bc 538 PIRSF PIRSF002741 3 538 3.4E-112 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APT61_RS09225 cbebc10764b42ae736a202ffb5c6dabe 231 PANTHER PTHR12192 1 223 8.6E-117 T 22-04-2016 IPR006840 ChaC-like protein APT61_RS09225 cbebc10764b42ae736a202ffb5c6dabe 231 Gene3D G3DSA:3.10.490.10 41 209 1.1E-44 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like APT61_RS09225 cbebc10764b42ae736a202ffb5c6dabe 231 Pfam PF04752 ChaC-like protein 47 214 9.9E-51 T 22-04-2016 IPR006840 ChaC-like protein APT61_RS09225 cbebc10764b42ae736a202ffb5c6dabe 231 SUPERFAMILY SSF110857 47 160 3.79E-10 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like APT61_RS09225 cbebc10764b42ae736a202ffb5c6dabe 231 PANTHER PTHR12192:SF9 1 223 8.6E-117 T 22-04-2016 APT61_RS16170 0dcd7be1f782213a644b7ffb8e056e2a 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 234 9.5E-58 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APT61_RS16170 0dcd7be1f782213a644b7ffb8e056e2a 247 Gene3D G3DSA:3.40.1390.30 1 107 5.9E-40 T 22-04-2016 APT61_RS16170 0dcd7be1f782213a644b7ffb8e056e2a 247 Gene3D G3DSA:3.40.1390.30 108 214 1.3E-28 T 22-04-2016 APT61_RS16170 0dcd7be1f782213a644b7ffb8e056e2a 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 1.1E-78 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APT61_RS16170 0dcd7be1f782213a644b7ffb8e056e2a 247 PANTHER PTHR13799 1 243 8.0E-94 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APT61_RS16170 0dcd7be1f782213a644b7ffb8e056e2a 247 SUPERFAMILY SSF102705 1 246 2.09E-84 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 APT61_RS05485 6fcee289b147fcf8faec8035aac63199 101 Pfam PF03992 Antibiotic biosynthesis monooxygenase 7 80 1.7E-15 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain APT61_RS05485 6fcee289b147fcf8faec8035aac63199 101 PANTHER PTHR33336:SF5 7 100 6.4E-22 T 22-04-2016 APT61_RS05485 6fcee289b147fcf8faec8035aac63199 101 SUPERFAMILY SSF54909 7 99 1.86E-27 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS05485 6fcee289b147fcf8faec8035aac63199 101 Gene3D G3DSA:3.30.70.900 7 99 7.0E-29 T 22-04-2016 APT61_RS05485 6fcee289b147fcf8faec8035aac63199 101 PANTHER PTHR33336 7 100 6.4E-22 T 22-04-2016 APT61_RS16335 7e42b9230a7a328c90cc89f61f863f5d 348 Pfam PF02562 PhoH-like protein 118 321 3.8E-95 T 22-04-2016 IPR003714 PhoH-like protein GO:0005524 APT61_RS16335 7e42b9230a7a328c90cc89f61f863f5d 348 PANTHER PTHR30473:SF1 1 344 3.1E-210 T 22-04-2016 APT61_RS16335 7e42b9230a7a328c90cc89f61f863f5d 348 Gene3D G3DSA:3.40.50.300 118 321 1.1E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16335 7e42b9230a7a328c90cc89f61f863f5d 348 SUPERFAMILY SSF52540 117 293 3.62E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16335 7e42b9230a7a328c90cc89f61f863f5d 348 PANTHER PTHR30473 1 344 3.1E-210 T 22-04-2016 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 PANTHER PTHR34501:SF4 2 369 1.8E-264 T 22-04-2016 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 PANTHER PTHR34501 2 369 1.8E-264 T 22-04-2016 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 1.3E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.3E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.3E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 320 337 1.3E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 238 250 1.3E-17 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 Gene3D G3DSA:2.40.160.10 22 369 5.6E-109 T 22-04-2016 IPR023614 Porin domain APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 2.0E-71 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 PRINTS PR00183 E.coli/Salmonella-type porin signature 275 294 2.0E-71 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 2.0E-71 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 2.0E-71 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 2.0E-71 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 PRINTS PR00183 E.coli/Salmonella-type porin signature 244 261 2.0E-71 T 22-04-2016 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 SUPERFAMILY SSF56935 22 369 4.45E-86 T 22-04-2016 APT61_RS09960 519d0aa997335b936f5905cb07619c8d 369 Pfam PF00267 Gram-negative porin 27 369 1.5E-153 T 22-04-2016 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 APT61_RS00635 db6913a1478ab2c9412c1e15ec66eb60 359 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 10 335 8.5E-91 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 APT61_RS00635 db6913a1478ab2c9412c1e15ec66eb60 359 PANTHER PTHR30505:SF1 1 359 7.0E-160 T 22-04-2016 APT61_RS00635 db6913a1478ab2c9412c1e15ec66eb60 359 PANTHER PTHR30505 1 359 7.0E-160 T 22-04-2016 APT61_RS20420 14fcd41482fdde90e4c3ff01f8fef33e 325 Gene3D G3DSA:3.30.930.10 15 320 2.9E-74 T 22-04-2016 APT61_RS20420 14fcd41482fdde90e4c3ff01f8fef33e 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 321 2.2E-46 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS20420 14fcd41482fdde90e4c3ff01f8fef33e 325 PANTHER PTHR22594 15 324 2.4E-162 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 APT61_RS20420 14fcd41482fdde90e4c3ff01f8fef33e 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 57.827 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 APT61_RS20420 14fcd41482fdde90e4c3ff01f8fef33e 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 1.9E-133 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 APT61_RS20420 14fcd41482fdde90e4c3ff01f8fef33e 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 2.5E-6 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APT61_RS20420 14fcd41482fdde90e4c3ff01f8fef33e 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 2.5E-6 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 APT61_RS20420 14fcd41482fdde90e4c3ff01f8fef33e 325 SUPERFAMILY SSF55681 12 320 1.13E-83 T 22-04-2016 APT61_RS20420 14fcd41482fdde90e4c3ff01f8fef33e 325 PANTHER PTHR22594:SF7 15 324 2.4E-162 T 22-04-2016 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 APT61_RS04010 35ef325a5c5407e756fd1d1abe9e980e 235 Pfam PF04231 Endonuclease I 46 229 4.4E-45 T 22-04-2016 IPR007346 Endonuclease I GO:0004518 APT61_RS04010 35ef325a5c5407e756fd1d1abe9e980e 235 PANTHER PTHR33607 1 232 1.3E-68 T 22-04-2016 APT61_RS04010 35ef325a5c5407e756fd1d1abe9e980e 235 SUPERFAMILY SSF54060 26 230 2.0E-87 T 22-04-2016 APT61_RS07325 27eb55ed076eb6eac49e707646603529 472 PANTHER PTHR30203:SF6 10 470 2.4E-184 T 22-04-2016 APT61_RS07325 27eb55ed076eb6eac49e707646603529 472 PANTHER PTHR30203 10 470 2.4E-184 T 22-04-2016 APT61_RS07325 27eb55ed076eb6eac49e707646603529 472 Gene3D G3DSA:1.20.1600.10 49 470 1.4E-82 T 22-04-2016 APT61_RS07325 27eb55ed076eb6eac49e707646603529 472 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 17 468 4.8E-84 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APT61_RS07325 27eb55ed076eb6eac49e707646603529 472 SUPERFAMILY SSF56954 2 470 1.31E-80 T 22-04-2016 APT61_RS07325 27eb55ed076eb6eac49e707646603529 472 Pfam PF02321 Outer membrane efflux protein 287 466 1.8E-15 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APT61_RS07325 27eb55ed076eb6eac49e707646603529 472 Pfam PF02321 Outer membrane efflux protein 64 261 5.6E-19 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APT61_RS02910 fc02c302a3b695bd9cb479d60676ca6f 131 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 15 128 4.3E-52 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 APT61_RS02910 fc02c302a3b695bd9cb479d60676ca6f 131 PANTHER PTHR34039 12 131 8.6E-44 T 22-04-2016 APT61_RS02910 fc02c302a3b695bd9cb479d60676ca6f 131 Pfam PF02021 Uncharacterised protein family UPF0102 24 114 9.0E-26 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 APT61_RS02910 fc02c302a3b695bd9cb479d60676ca6f 131 PANTHER PTHR34039:SF1 12 131 8.6E-44 T 22-04-2016 APT61_RS02910 fc02c302a3b695bd9cb479d60676ca6f 131 SUPERFAMILY SSF52980 17 125 1.01E-23 T 22-04-2016 IPR011335 Restriction endonuclease type II-like APT61_RS02910 fc02c302a3b695bd9cb479d60676ca6f 131 Hamap MF_00048 UPF0102 protein YraN [yraN]. 16 128 24.243 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 APT61_RS02910 fc02c302a3b695bd9cb479d60676ca6f 131 Gene3D G3DSA:3.40.1350.10 24 129 2.4E-37 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 APT61_RS21335 3283bd06085121b54dfb8bf348023da2 338 PANTHER PTHR30146:SF27 6 336 1.2E-105 T 22-04-2016 APT61_RS21335 3283bd06085121b54dfb8bf348023da2 338 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 67 318 2.0E-22 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain APT61_RS21335 3283bd06085121b54dfb8bf348023da2 338 SUPERFAMILY SSF53822 64 320 2.75E-55 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS21335 3283bd06085121b54dfb8bf348023da2 338 PANTHER PTHR30146 6 336 1.2E-105 T 22-04-2016 APT61_RS21335 3283bd06085121b54dfb8bf348023da2 338 SUPERFAMILY SSF47413 6 65 1.13E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS21335 3283bd06085121b54dfb8bf348023da2 338 Gene3D G3DSA:3.40.50.2300 179 316 3.0E-25 T 22-04-2016 APT61_RS21335 3283bd06085121b54dfb8bf348023da2 338 SMART SM00354 6 77 5.4E-22 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS21335 3283bd06085121b54dfb8bf348023da2 338 Gene3D G3DSA:3.40.50.2300 60 178 2.9E-46 T 22-04-2016 APT61_RS21335 3283bd06085121b54dfb8bf348023da2 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 54 9.9E-10 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 APT61_RS21335 3283bd06085121b54dfb8bf348023da2 338 Gene3D G3DSA:1.10.260.40 7 59 9.4E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS18370 c5ad1293f37e5bb670de9350df2eea2f 151 PANTHER PTHR33823 8 149 1.3E-70 T 22-04-2016 APT61_RS18370 c5ad1293f37e5bb670de9350df2eea2f 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 29.872 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 APT61_RS18370 c5ad1293f37e5bb670de9350df2eea2f 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APT61_RS18370 c5ad1293f37e5bb670de9350df2eea2f 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 22-04-2016 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria APT61_RS18370 c5ad1293f37e5bb670de9350df2eea2f 151 PANTHER PTHR33823:SF2 8 149 1.3E-70 T 22-04-2016 APT61_RS18370 c5ad1293f37e5bb670de9350df2eea2f 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 22-04-2016 IPR020458 Zinc finger, DksA/TraR C4-type conserved site APT61_RS18370 c5ad1293f37e5bb670de9350df2eea2f 151 SUPERFAMILY SSF109635 9 109 3.01E-37 T 22-04-2016 APT61_RS18370 c5ad1293f37e5bb670de9350df2eea2f 151 SUPERFAMILY SSF57716 111 149 5.7E-10 T 22-04-2016 APT61_RS18370 c5ad1293f37e5bb670de9350df2eea2f 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 3.0E-51 T 22-04-2016 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 APT61_RS18370 c5ad1293f37e5bb670de9350df2eea2f 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 143 4.0E-10 T 22-04-2016 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 APT61_RS02825 8997b02fd23d7771a68d2741208677e8 314 SUPERFAMILY SSF88697 251 310 7.45E-14 T 22-04-2016 IPR015947 PUA-like domain APT61_RS02825 8997b02fd23d7771a68d2741208677e8 314 SUPERFAMILY SSF55120 11 246 7.19E-82 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS02825 8997b02fd23d7771a68d2741208677e8 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.479 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS02825 8997b02fd23d7771a68d2741208677e8 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 247 1.8E-23 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal APT61_RS02825 8997b02fd23d7771a68d2741208677e8 314 Gene3D G3DSA:2.30.130.10 250 312 2.9E-27 T 22-04-2016 IPR015947 PUA-like domain APT61_RS02825 8997b02fd23d7771a68d2741208677e8 314 PANTHER PTHR13767 2 309 2.0E-132 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS02825 8997b02fd23d7771a68d2741208677e8 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 3.4E-18 T 22-04-2016 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS02825 8997b02fd23d7771a68d2741208677e8 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 1.7E-57 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 APT61_RS02825 8997b02fd23d7771a68d2741208677e8 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 1.2E-92 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS02825 8997b02fd23d7771a68d2741208677e8 314 PANTHER PTHR13767:SF2 2 309 2.0E-132 T 22-04-2016 APT61_RS05550 ffff984ec463fb5f024dd3bc059b55c6 113 PANTHER PTHR37482 1 110 1.9E-54 T 22-04-2016 APT61_RS05550 ffff984ec463fb5f024dd3bc059b55c6 113 Pfam PF04355 SmpA / OmlA family 35 104 3.2E-27 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 APT61_RS05550 ffff984ec463fb5f024dd3bc059b55c6 113 PANTHER PTHR37482:SF1 1 110 1.9E-54 T 22-04-2016 APT61_RS05550 ffff984ec463fb5f024dd3bc059b55c6 113 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 33.266 T 22-04-2016 IPR026592 Outer membrane protein assembly factor BamE APT61_RS15770 15a72a909ee8634022e540327ec633e0 368 PANTHER PTHR30294 1 367 1.9E-301 T 22-04-2016 APT61_RS15770 15a72a909ee8634022e540327ec633e0 368 Pfam PF12698 ABC-2 family transporter protein 25 359 1.1E-47 T 22-04-2016 APT61_RS15770 15a72a909ee8634022e540327ec633e0 368 PANTHER PTHR30294:SF15 1 367 1.9E-301 T 22-04-2016 APT61_RS15770 15a72a909ee8634022e540327ec633e0 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 1.3E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APT61_RS15770 15a72a909ee8634022e540327ec633e0 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 1.3E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APT61_RS15770 15a72a909ee8634022e540327ec633e0 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 1.3E-6 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 APT61_RS17995 41d0aeff21f07ad9f34380cd2bc95686 246 Pfam PF03734 L,D-transpeptidase catalytic domain 45 159 1.5E-6 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 APT61_RS17995 41d0aeff21f07ad9f34380cd2bc95686 246 SUPERFAMILY SSF141523 42 159 4.97E-10 T 22-04-2016 APT61_RS17995 41d0aeff21f07ad9f34380cd2bc95686 246 PANTHER PTHR36699 6 246 6.0E-74 T 22-04-2016 APT61_RS15610 1b3aa78206c4afca45f10f3f5b14de3f 507 Gene3D G3DSA:1.20.1600.10 54 489 1.3E-123 T 22-04-2016 APT61_RS15610 1b3aa78206c4afca45f10f3f5b14de3f 507 Pfam PF02321 Outer membrane efflux protein 306 484 2.9E-31 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APT61_RS15610 1b3aa78206c4afca45f10f3f5b14de3f 507 Pfam PF02321 Outer membrane efflux protein 65 274 1.5E-32 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 APT61_RS15610 1b3aa78206c4afca45f10f3f5b14de3f 507 PANTHER PTHR30203:SF3 9 505 3.7E-132 T 22-04-2016 APT61_RS15610 1b3aa78206c4afca45f10f3f5b14de3f 507 PANTHER PTHR30203 9 505 3.7E-132 T 22-04-2016 APT61_RS15610 1b3aa78206c4afca45f10f3f5b14de3f 507 SUPERFAMILY SSF56954 56 489 3.66E-120 T 22-04-2016 APT61_RS15610 1b3aa78206c4afca45f10f3f5b14de3f 507 SUPERFAMILY SSF56954 2 29 3.66E-120 T 22-04-2016 APT61_RS15610 1b3aa78206c4afca45f10f3f5b14de3f 507 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 486 1.7E-123 T 22-04-2016 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 APT61_RS09205 425514b8fe3a6659fcce13a8de836fe7 269 Gene3D G3DSA:1.25.40.10 187 258 1.4E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS09205 425514b8fe3a6659fcce13a8de836fe7 269 Pfam PF13369 Transglutaminase-like superfamily 34 184 6.7E-40 T 22-04-2016 IPR032698 Protein SirB1, N-terminal APT61_RS09205 425514b8fe3a6659fcce13a8de836fe7 269 Pfam PF13371 Tetratricopeptide repeat 187 259 1.0E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 APT61_RS09205 425514b8fe3a6659fcce13a8de836fe7 269 PANTHER PTHR31350 24 261 7.4E-53 T 22-04-2016 APT61_RS14610 857ef7d788d57e0743ad4c57be616ee1 103 PANTHER PTHR30505 1 103 9.4E-40 T 22-04-2016 APT61_RS14610 857ef7d788d57e0743ad4c57be616ee1 103 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 88 3.4E-31 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 APT61_RS14610 857ef7d788d57e0743ad4c57be616ee1 103 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 95 1.6E-18 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS14610 857ef7d788d57e0743ad4c57be616ee1 103 SUPERFAMILY SSF52794 2 98 4.06E-34 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS14610 857ef7d788d57e0743ad4c57be616ee1 103 Gene3D G3DSA:3.40.50.2300 1 98 7.3E-39 T 22-04-2016 APT61_RS14910 6b4a51f01b875af4a4b6b857e99b6ca4 261 Gene3D G3DSA:3.40.50.150 6 235 3.0E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS14910 6b4a51f01b875af4a4b6b857e99b6ca4 261 PANTHER PTHR10108:SF919 1 220 4.3E-43 T 22-04-2016 APT61_RS14910 6b4a51f01b875af4a4b6b857e99b6ca4 261 PANTHER PTHR10108 1 220 4.3E-43 T 22-04-2016 APT61_RS14910 6b4a51f01b875af4a4b6b857e99b6ca4 261 Pfam PF13847 Methyltransferase domain 43 151 6.4E-19 T 22-04-2016 IPR025714 Methyltransferase domain APT61_RS14910 6b4a51f01b875af4a4b6b857e99b6ca4 261 SUPERFAMILY SSF53335 6 247 8.97E-40 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS16520 1abb6e643466a7ec3247d1a829195d30 298 SUPERFAMILY SSF53850 95 294 2.9E-28 T 22-04-2016 APT61_RS16520 1abb6e643466a7ec3247d1a829195d30 298 Gene3D G3DSA:3.40.190.10 188 271 4.2E-14 T 22-04-2016 APT61_RS16520 1abb6e643466a7ec3247d1a829195d30 298 Gene3D G3DSA:3.40.190.10 101 187 1.7E-5 T 22-04-2016 APT61_RS16520 1abb6e643466a7ec3247d1a829195d30 298 PANTHER PTHR30118 1 294 5.0E-133 T 22-04-2016 APT61_RS16520 1abb6e643466a7ec3247d1a829195d30 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 48 59 8.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS16520 1abb6e643466a7ec3247d1a829195d30 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 38 48 8.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS16520 1abb6e643466a7ec3247d1a829195d30 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 38 8.5E-5 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS16520 1abb6e643466a7ec3247d1a829195d30 298 Pfam PF03466 LysR substrate binding domain 101 294 1.8E-19 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS16520 1abb6e643466a7ec3247d1a829195d30 298 SUPERFAMILY SSF46785 8 91 8.16E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS16520 1abb6e643466a7ec3247d1a829195d30 298 PANTHER PTHR30118:SF2 1 294 5.0E-133 T 22-04-2016 APT61_RS16520 1abb6e643466a7ec3247d1a829195d30 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 2.9E-19 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS16520 1abb6e643466a7ec3247d1a829195d30 298 Gene3D G3DSA:1.10.10.10 5 89 3.8E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS18670 8c3cfb4e6c26f2f65e43f2226c766f80 574 SUPERFAMILY SSF52518 2 179 1.51E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS18670 8c3cfb4e6c26f2f65e43f2226c766f80 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 APT61_RS18670 8c3cfb4e6c26f2f65e43f2226c766f80 574 Gene3D G3DSA:3.40.50.1220 189 357 1.1E-67 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS18670 8c3cfb4e6c26f2f65e43f2226c766f80 574 PANTHER PTHR18968 2 574 0.0 T 22-04-2016 APT61_RS18670 8c3cfb4e6c26f2f65e43f2226c766f80 574 Gene3D G3DSA:3.40.50.970 2 173 1.5E-73 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS18670 8c3cfb4e6c26f2f65e43f2226c766f80 574 PANTHER PTHR18968:SF116 2 574 0.0 T 22-04-2016 APT61_RS18670 8c3cfb4e6c26f2f65e43f2226c766f80 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 545 3.2E-49 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 APT61_RS18670 8c3cfb4e6c26f2f65e43f2226c766f80 574 Gene3D G3DSA:3.40.50.970 358 557 1.2E-74 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS18670 8c3cfb4e6c26f2f65e43f2226c766f80 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 330 1.2E-46 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 APT61_RS18670 8c3cfb4e6c26f2f65e43f2226c766f80 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 168 2.7E-57 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 APT61_RS18670 8c3cfb4e6c26f2f65e43f2226c766f80 574 SUPERFAMILY SSF52467 189 362 2.03E-62 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain APT61_RS18670 8c3cfb4e6c26f2f65e43f2226c766f80 574 SUPERFAMILY SSF52518 371 567 8.04E-69 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold APT61_RS18670 8c3cfb4e6c26f2f65e43f2226c766f80 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 1.7E-278 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 APT61_RS14490 65c29dbf466723e1eaea6e44f1e61f6d 264 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 206 247 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 APT61_RS14490 65c29dbf466723e1eaea6e44f1e61f6d 264 PANTHER PTHR11019:SF138 5 259 1.4E-70 T 22-04-2016 APT61_RS14490 65c29dbf466723e1eaea6e44f1e61f6d 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 220 235 4.4E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS14490 65c29dbf466723e1eaea6e44f1e61f6d 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 235 251 4.4E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 APT61_RS14490 65c29dbf466723e1eaea6e44f1e61f6d 264 SUPERFAMILY SSF51182 11 171 1.99E-16 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS14490 65c29dbf466723e1eaea6e44f1e61f6d 264 Gene3D G3DSA:1.10.10.60 207 250 1.8E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS14490 65c29dbf466723e1eaea6e44f1e61f6d 264 Gene3D G3DSA:2.60.120.10 9 85 1.8E-10 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS14490 65c29dbf466723e1eaea6e44f1e61f6d 264 SUPERFAMILY SSF46689 155 203 2.69E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS14490 65c29dbf466723e1eaea6e44f1e61f6d 264 Pfam PF12833 Helix-turn-helix domain 176 251 2.3E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS14490 65c29dbf466723e1eaea6e44f1e61f6d 264 PANTHER PTHR11019 5 259 1.4E-70 T 22-04-2016 APT61_RS14490 65c29dbf466723e1eaea6e44f1e61f6d 264 SMART SM00342 169 251 1.6E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 APT61_RS14490 65c29dbf466723e1eaea6e44f1e61f6d 264 SUPERFAMILY SSF46689 206 252 1.93E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS14490 65c29dbf466723e1eaea6e44f1e61f6d 264 Pfam PF07883 Cupin domain 21 85 3.4E-7 T 22-04-2016 IPR013096 Cupin 2, conserved barrel APT61_RS14490 65c29dbf466723e1eaea6e44f1e61f6d 264 Gene3D G3DSA:1.10.10.60 148 206 7.8E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS17590 1cfbbda12fdc907873aace012173bd0c 407 PANTHER PTHR23504 4 406 3.8E-106 T 22-04-2016 APT61_RS17590 1cfbbda12fdc907873aace012173bd0c 407 Pfam PF07690 Major Facilitator Superfamily 11 302 1.5E-35 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS17590 1cfbbda12fdc907873aace012173bd0c 407 PANTHER PTHR23504:SF14 4 406 3.8E-106 T 22-04-2016 APT61_RS17590 1cfbbda12fdc907873aace012173bd0c 407 Gene3D G3DSA:1.20.1250.20 8 191 1.8E-37 T 22-04-2016 APT61_RS17590 1cfbbda12fdc907873aace012173bd0c 407 Gene3D G3DSA:1.20.1250.20 214 400 2.7E-28 T 22-04-2016 APT61_RS17590 1cfbbda12fdc907873aace012173bd0c 407 PRINTS PR01035 Tetracycline resistance protein signature 106 127 3.3E-11 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS17590 1cfbbda12fdc907873aace012173bd0c 407 PRINTS PR01035 Tetracycline resistance protein signature 341 364 3.3E-11 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS17590 1cfbbda12fdc907873aace012173bd0c 407 PRINTS PR01035 Tetracycline resistance protein signature 79 103 3.3E-11 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS17590 1cfbbda12fdc907873aace012173bd0c 407 PRINTS PR01035 Tetracycline resistance protein signature 17 33 3.3E-11 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS17590 1cfbbda12fdc907873aace012173bd0c 407 PRINTS PR01035 Tetracycline resistance protein signature 136 158 3.3E-11 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS17590 1cfbbda12fdc907873aace012173bd0c 407 SUPERFAMILY SSF103473 6 398 2.96E-67 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS06825 b07a871fec3b3b9216ccefd3cd63d722 312 SUPERFAMILY SSF53850 96 291 1.99E-27 T 22-04-2016 APT61_RS06825 b07a871fec3b3b9216ccefd3cd63d722 312 PANTHER PTHR30579 6 300 6.8E-216 T 22-04-2016 APT61_RS06825 b07a871fec3b3b9216ccefd3cd63d722 312 SUPERFAMILY SSF46785 10 89 2.9E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS06825 b07a871fec3b3b9216ccefd3cd63d722 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 7.1E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS06825 b07a871fec3b3b9216ccefd3cd63d722 312 Gene3D G3DSA:1.10.10.10 10 90 1.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS06825 b07a871fec3b3b9216ccefd3cd63d722 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS06825 b07a871fec3b3b9216ccefd3cd63d722 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS06825 b07a871fec3b3b9216ccefd3cd63d722 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.4E-6 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS06825 b07a871fec3b3b9216ccefd3cd63d722 312 Gene3D G3DSA:3.40.190.10 187 246 7.0E-10 T 22-04-2016 APT61_RS06825 b07a871fec3b3b9216ccefd3cd63d722 312 Gene3D G3DSA:3.40.190.10 96 186 4.7E-15 T 22-04-2016 APT61_RS06825 b07a871fec3b3b9216ccefd3cd63d722 312 Pfam PF03466 LysR substrate binding domain 97 272 1.3E-26 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS06825 b07a871fec3b3b9216ccefd3cd63d722 312 PANTHER PTHR30579:SF4 6 300 6.8E-216 T 22-04-2016 APT61_RS17615 792783b9039ab65b64c57f60d5f7d6b4 366 Pfam PF07759 Protein of unknown function (DUF1615) 51 364 9.5E-144 T 22-04-2016 IPR011673 Protein of unknown function DUF1615 APT61_RS17615 792783b9039ab65b64c57f60d5f7d6b4 366 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 21 363 6.0E-170 T 22-04-2016 IPR011673 Protein of unknown function DUF1615 APT61_RS18405 b001afe614ac4dfcfc49a6253915c3fa 415 SUPERFAMILY SSF88713 197 386 1.65E-29 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APT61_RS18405 b001afe614ac4dfcfc49a6253915c3fa 415 PANTHER PTHR32027:SF8 70 410 8.8E-145 T 22-04-2016 APT61_RS18405 b001afe614ac4dfcfc49a6253915c3fa 415 Pfam PF01522 Polysaccharide deacetylase 234 372 2.8E-21 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APT61_RS18405 b001afe614ac4dfcfc49a6253915c3fa 415 PANTHER PTHR32027 70 410 8.8E-145 T 22-04-2016 APT61_RS18405 b001afe614ac4dfcfc49a6253915c3fa 415 Gene3D G3DSA:3.20.20.370 208 379 2.1E-22 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 Gene3D G3DSA:1.10.490.10 2 140 6.7E-54 T 22-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 Pfam PF00042 Globin 7 102 2.8E-14 T 22-04-2016 IPR000971 Globin GO:0019825|GO:0020037 APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 SUPERFAMILY SSF46458 1 142 1.66E-37 T 22-04-2016 IPR009050 Globin-like APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 5.6E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 5.6E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 5.6E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 5.6E-6 T 22-04-2016 IPR001221 Phenol hydroxylase reductase GO:0055114 APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 SUPERFAMILY SSF52343 256 394 7.73E-37 T 22-04-2016 APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 55.906 T 22-04-2016 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 Pfam PF00970 Oxidoreductase FAD-binding domain 157 252 4.0E-10 T 22-04-2016 IPR008333 Oxidoreductase, FAD-binding domain APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 Gene3D G3DSA:2.40.30.10 149 254 5.5E-33 T 22-04-2016 APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 PANTHER PTHR22924:SF49 1 392 2.4E-124 T 22-04-2016 APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 Gene3D G3DSA:3.40.50.80 257 394 8.1E-34 T 22-04-2016 APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 PANTHER PTHR22924 1 392 2.4E-124 T 22-04-2016 APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 SUPERFAMILY SSF63380 148 253 1.57E-28 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 APT61_RS05875 f2b93116ad990087e01f3a3f89af42d8 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 372 4.2E-14 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 APT61_RS09245 072a47fb7ba98d80a3820c3623e839d7 384 Pfam PF03861 ANTAR domain 324 376 8.3E-18 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 APT61_RS09245 072a47fb7ba98d80a3820c3623e839d7 384 Pfam PF08376 Nitrate and nitrite sensing 38 271 1.8E-39 T 22-04-2016 IPR013587 Nitrate/nitrite sensing protein APT61_RS09245 072a47fb7ba98d80a3820c3623e839d7 384 SUPERFAMILY SSF52172 303 376 1.19E-15 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS09245 072a47fb7ba98d80a3820c3623e839d7 384 Gene3D G3DSA:1.10.10.10 324 381 3.2E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS09245 072a47fb7ba98d80a3820c3623e839d7 384 SMART SM01012 321 376 9.1E-20 T 22-04-2016 IPR005561 ANTAR domain GO:0003723 APT61_RS08940 8d9337875b25e92483104e3ef0fb03f9 203 PANTHER PTHR21666 22 203 1.2E-106 T 22-04-2016 APT61_RS08940 8d9337875b25e92483104e3ef0fb03f9 203 Hamap MF_01381 Endo-type membrane-bound lytic murein transglycosylase A [emtA]. 1 203 57.772 T 22-04-2016 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A GO:0008932|GO:0009279|GO:0016837|GO:0016998 APT61_RS08940 8d9337875b25e92483104e3ef0fb03f9 203 Pfam PF01464 Transglycosylase SLT domain 43 168 2.9E-27 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 APT61_RS08940 8d9337875b25e92483104e3ef0fb03f9 203 SUPERFAMILY SSF53955 37 200 2.82E-27 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS08940 8d9337875b25e92483104e3ef0fb03f9 203 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 60 88 - T 22-04-2016 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 APT61_RS08940 8d9337875b25e92483104e3ef0fb03f9 203 Gene3D G3DSA:1.10.530.10 34 201 4.3E-32 T 22-04-2016 APT61_RS08940 8d9337875b25e92483104e3ef0fb03f9 203 PANTHER PTHR21666:SF216 22 203 1.2E-106 T 22-04-2016 APT61_RS11640 d6ef4645bc94cfa94cc0d611c2094837 367 PANTHER PTHR30519 7 367 4.2E-183 T 22-04-2016 APT61_RS11640 d6ef4645bc94cfa94cc0d611c2094837 367 SUPERFAMILY SSF51726 11 367 2.49E-82 T 22-04-2016 APT61_RS11640 d6ef4645bc94cfa94cc0d611c2094837 367 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 12 347 7.7E-15 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 APT61_RS11640 d6ef4645bc94cfa94cc0d611c2094837 367 PANTHER PTHR30519:SF3 7 367 4.2E-183 T 22-04-2016 APT61_RS11640 d6ef4645bc94cfa94cc0d611c2094837 367 Gene3D G3DSA:3.20.20.210 5 367 5.3E-119 T 22-04-2016 APT61_RS09085 b81736f5af8d37690703567047ab04db 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 100 1.5E-17 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD APT61_RS01730 89778e7abb835a9973ffb37fd211a1d1 157 Gene3D G3DSA:1.10.287.180 1 75 4.3E-26 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APT61_RS01730 89778e7abb835a9973ffb37fd211a1d1 157 Gene3D G3DSA:3.10.50.30 76 155 9.5E-26 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APT61_RS01730 89778e7abb835a9973ffb37fd211a1d1 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 28.22 T 22-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 APT61_RS01730 89778e7abb835a9973ffb37fd211a1d1 157 PANTHER PTHR30437 1 155 1.1E-90 T 22-04-2016 APT61_RS01730 89778e7abb835a9973ffb37fd211a1d1 157 PANTHER PTHR30437:SF6 1 155 1.1E-90 T 22-04-2016 APT61_RS01730 89778e7abb835a9973ffb37fd211a1d1 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 22-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 APT61_RS01730 89778e7abb835a9973ffb37fd211a1d1 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 5.6E-22 T 22-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 APT61_RS01730 89778e7abb835a9973ffb37fd211a1d1 157 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 1.0E-84 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 APT61_RS01730 89778e7abb835a9973ffb37fd211a1d1 157 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 7.2E-26 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APT61_RS01730 89778e7abb835a9973ffb37fd211a1d1 157 SUPERFAMILY SSF46557 3 78 2.22E-27 T 22-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 APT61_RS01730 89778e7abb835a9973ffb37fd211a1d1 157 SUPERFAMILY SSF54534 80 155 6.15E-20 T 22-04-2016 APT61_RS01730 89778e7abb835a9973ffb37fd211a1d1 157 PIRSF PIRSF006092 1 157 3.3E-44 T 22-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 APT61_RS01730 89778e7abb835a9973ffb37fd211a1d1 157 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 53.336 T 22-04-2016 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 APT61_RS16930 86e454a2baef4f637bd595ff29783ac0 728 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 75 728 8.3E-121 T 22-04-2016 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 APT61_RS16930 86e454a2baef4f637bd595ff29783ac0 728 SUPERFAMILY SSF56935 65 728 4.58E-100 T 22-04-2016 APT61_RS16930 86e454a2baef4f637bd595ff29783ac0 728 SUPERFAMILY SSF56935 23 36 4.58E-100 T 22-04-2016 APT61_RS16930 86e454a2baef4f637bd595ff29783ac0 728 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 711 728 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site APT61_RS16930 86e454a2baef4f637bd595ff29783ac0 728 Gene3D G3DSA:2.170.130.10 25 182 3.4E-22 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS16930 86e454a2baef4f637bd595ff29783ac0 728 Pfam PF00593 TonB dependent receptor 489 726 5.0E-24 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS16930 86e454a2baef4f637bd595ff29783ac0 728 Gene3D G3DSA:2.40.170.20 189 728 5.8E-98 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS16930 86e454a2baef4f637bd595ff29783ac0 728 Pfam PF07715 TonB-dependent Receptor Plug Domain 74 170 1.9E-11 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS16930 86e454a2baef4f637bd595ff29783ac0 728 PANTHER PTHR32552:SF14 65 728 1.5E-215 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 APT61_RS16930 86e454a2baef4f637bd595ff29783ac0 728 PANTHER PTHR32552:SF14 11 36 1.5E-215 T 22-04-2016 IPR030149 TonB-dependent siderophore receptor FcuA/FatA GO:0004872|GO:0005506|GO:0009279|GO:0015891|GO:0016021 APT61_RS16930 86e454a2baef4f637bd595ff29783ac0 728 PANTHER PTHR32552 65 728 1.5E-215 T 22-04-2016 APT61_RS16930 86e454a2baef4f637bd595ff29783ac0 728 PANTHER PTHR32552 11 36 1.5E-215 T 22-04-2016 APT61_RS07035 24ca13ce83f315d4439493462aad59ce 216 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 19 210 1.9E-56 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like APT61_RS07035 24ca13ce83f315d4439493462aad59ce 216 PANTHER PTHR16557 34 216 8.1E-60 T 22-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 APT61_RS07035 24ca13ce83f315d4439493462aad59ce 216 PANTHER PTHR16557 3 15 8.1E-60 T 22-04-2016 IPR004574 Alkylated DNA repair protein AlkB GO:0006281|GO:0055114 APT61_RS07035 24ca13ce83f315d4439493462aad59ce 216 Gene3D G3DSA:2.60.120.590 14 213 1.2E-58 T 22-04-2016 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like APT61_RS07035 24ca13ce83f315d4439493462aad59ce 216 SUPERFAMILY SSF51197 15 212 2.75E-62 T 22-04-2016 APT61_RS14710 9c2a2f217751f573dcfb9a81d40f7be5 109 SUPERFAMILY SSF69721 2 109 3.66E-42 T 22-04-2016 IPR025526 DsrC-like domain APT61_RS14710 9c2a2f217751f573dcfb9a81d40f7be5 109 Gene3D G3DSA:3.30.1420.10 1 38 9.0E-13 T 22-04-2016 APT61_RS14710 9c2a2f217751f573dcfb9a81d40f7be5 109 PANTHER PTHR37010 1 109 1.8E-62 T 22-04-2016 APT61_RS14710 9c2a2f217751f573dcfb9a81d40f7be5 109 PIRSF PIRSF006223 2 109 4.8E-48 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE APT61_RS14710 9c2a2f217751f573dcfb9a81d40f7be5 109 PANTHER PTHR37010:SF1 1 109 1.8E-62 T 22-04-2016 APT61_RS14710 9c2a2f217751f573dcfb9a81d40f7be5 109 Pfam PF04358 DsrC like protein 4 109 2.9E-46 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE APT61_RS14710 9c2a2f217751f573dcfb9a81d40f7be5 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 3 109 6.6E-51 T 22-04-2016 IPR007453 Sulphur transfer protein DsrC/TusE APT61_RS14710 9c2a2f217751f573dcfb9a81d40f7be5 109 Gene3D G3DSA:1.10.10.370 39 109 7.7E-39 T 22-04-2016 APT61_RS11470 36641f02a05111fa38b0b766bdd25976 308 SUPERFAMILY SSF56601 7 308 2.11E-114 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS11470 36641f02a05111fa38b0b766bdd25976 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 5.2E-130 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APT61_RS11470 36641f02a05111fa38b0b766bdd25976 308 PANTHER PTHR12544 7 308 1.7E-163 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APT61_RS11470 36641f02a05111fa38b0b766bdd25976 308 Pfam PF04960 Glutaminase 24 308 1.1E-113 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APT61_RS11470 36641f02a05111fa38b0b766bdd25976 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 46.547 T 22-04-2016 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: REACT_13|Reactome: REACT_13685 APT61_RS11470 36641f02a05111fa38b0b766bdd25976 308 Gene3D G3DSA:3.40.710.10 7 308 1.9E-126 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like APT61_RS01225 a3fe31d54720af64ba7fc2567570c0cb 347 PANTHER PTHR30213 34 344 1.2E-87 T 22-04-2016 APT61_RS01225 a3fe31d54720af64ba7fc2567570c0cb 347 Pfam PF03631 Virulence factor BrkB 76 334 1.8E-49 T 22-04-2016 IPR017039 Virulence factor BrkB APT61_RS01225 a3fe31d54720af64ba7fc2567570c0cb 347 PANTHER PTHR30213:SF1 34 344 1.2E-87 T 22-04-2016 APT61_RS01225 a3fe31d54720af64ba7fc2567570c0cb 347 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 62 335 1.6E-124 T 22-04-2016 IPR005274 Inner membrane protein YhjD APT61_RS05595 97bc6d86713d54227835c9986c9694d1 255 Gene3D G3DSA:1.10.1270.20 161 251 1.4E-38 T 22-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APT61_RS05595 97bc6d86713d54227835c9986c9694d1 255 Gene3D G3DSA:3.40.1280.10 1 160 8.0E-68 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT61_RS05595 97bc6d86713d54227835c9986c9694d1 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 3.8E-72 T 22-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APT61_RS05595 97bc6d86713d54227835c9986c9694d1 255 PIRSF PIRSF000386 1 253 1.4E-104 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APT61_RS05595 97bc6d86713d54227835c9986c9694d1 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 235 1.8E-112 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APT61_RS05595 97bc6d86713d54227835c9986c9694d1 255 PANTHER PTHR32125 1 228 1.2E-124 T 22-04-2016 APT61_RS05595 97bc6d86713d54227835c9986c9694d1 255 PANTHER PTHR32125:SF1 1 228 1.2E-124 T 22-04-2016 APT61_RS05595 97bc6d86713d54227835c9986c9694d1 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 121.99 T 22-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 APT61_RS05595 97bc6d86713d54227835c9986c9694d1 255 SUPERFAMILY SSF75217 1 247 2.55E-103 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APT61_RS01430 5671007be169c69e27928489926cd0a3 185 Pfam PF08786 Domain of unknown function (DUF1795) 51 181 1.2E-29 T 22-04-2016 IPR014894 Protein DcrB APT61_RS08355 ee0f83296911ce076b89e1f7c5adf912 167 Pfam PF00210 Ferritin-like domain 7 143 2.5E-21 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APT61_RS08355 ee0f83296911ce076b89e1f7c5adf912 167 SUPERFAMILY SSF47240 5 158 1.24E-30 T 22-04-2016 IPR009078 Ferritin-like superfamily APT61_RS08355 ee0f83296911ce076b89e1f7c5adf912 167 PANTHER PTHR11431:SF40 1 164 3.1E-40 T 22-04-2016 APT61_RS08355 ee0f83296911ce076b89e1f7c5adf912 167 Gene3D G3DSA:1.20.1260.10 4 164 1.7E-32 T 22-04-2016 IPR012347 Ferritin-related APT61_RS08355 ee0f83296911ce076b89e1f7c5adf912 167 PANTHER PTHR11431 1 164 3.1E-40 T 22-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 APT61_RS13035 26f93ee9249180f35c81ee2d08c0a19c 144 SUPERFAMILY SSF54364 2 50 3.66E-19 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APT61_RS13035 26f93ee9249180f35c81ee2d08c0a19c 144 PANTHER PTHR10938 1 144 3.4E-61 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APT61_RS13035 26f93ee9249180f35c81ee2d08c0a19c 144 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 143 23.034 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APT61_RS13035 26f93ee9249180f35c81ee2d08c0a19c 144 SUPERFAMILY SSF55200 54 143 1.57E-35 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APT61_RS13035 26f93ee9249180f35c81ee2d08c0a19c 144 Gene3D G3DSA:3.30.110.10 51 143 4.4E-41 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APT61_RS13035 26f93ee9249180f35c81ee2d08c0a19c 144 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 55 141 4.1E-38 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 APT61_RS13035 26f93ee9249180f35c81ee2d08c0a19c 144 Gene3D G3DSA:3.10.20.80 1 50 1.1E-23 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APT61_RS13035 26f93ee9249180f35c81ee2d08c0a19c 144 ProSitePatterns PS00938 Initiation factor 3 signature. 30 43 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 APT61_RS13035 26f93ee9249180f35c81ee2d08c0a19c 144 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 48 1.2E-20 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 APT61_RS13035 26f93ee9249180f35c81ee2d08c0a19c 144 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 143 2.3E-67 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 APT61_RS19015 6ca4e6279c2f9dd9c89eb731aec9da19 258 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS19015 6ca4e6279c2f9dd9c89eb731aec9da19 258 Gene3D G3DSA:3.40.50.300 3 231 5.5E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19015 6ca4e6279c2f9dd9c89eb731aec9da19 258 PANTHER PTHR24220 6 241 5.6E-56 T 22-04-2016 APT61_RS19015 6ca4e6279c2f9dd9c89eb731aec9da19 258 SUPERFAMILY SSF52540 5 229 4.05E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS19015 6ca4e6279c2f9dd9c89eb731aec9da19 258 Pfam PF00005 ABC transporter 28 165 8.4E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS19015 6ca4e6279c2f9dd9c89eb731aec9da19 258 SMART SM00382 30 215 2.6E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS10525 734230ede044269c1a3fa1e7500eede3 447 PANTHER PTHR39479:SF2 1 447 4.9E-279 T 22-04-2016 APT61_RS10525 734230ede044269c1a3fa1e7500eede3 447 SMART SM01150 11 401 1.9E-225 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 APT61_RS10525 734230ede044269c1a3fa1e7500eede3 447 PANTHER PTHR39479 1 447 4.9E-279 T 22-04-2016 APT61_RS10525 734230ede044269c1a3fa1e7500eede3 447 Pfam PF07063 Domain of unknown function (DUF1338) 10 401 4.3E-118 T 22-04-2016 IPR009770 Domain of unknown function DUF1338 APT61_RS11295 e96fa403ea66d2aed4c90cf2bdcdb56e 479 Pfam PF01425 Amidase 34 467 5.7E-96 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS11295 e96fa403ea66d2aed4c90cf2bdcdb56e 479 PANTHER PTHR11895 11 478 8.7E-129 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS11295 e96fa403ea66d2aed4c90cf2bdcdb56e 479 Gene3D G3DSA:3.90.1300.10 12 478 9.5E-123 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS11295 e96fa403ea66d2aed4c90cf2bdcdb56e 479 ProSitePatterns PS00571 Amidases signature. 165 196 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS11295 e96fa403ea66d2aed4c90cf2bdcdb56e 479 SUPERFAMILY SSF75304 9 477 1.83E-119 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS16345 35c1394127c9a1717036bbbf6933ce59 292 SUPERFAMILY SSF56176 204 288 1.04E-24 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APT61_RS16345 35c1394127c9a1717036bbbf6933ce59 292 SMART SM01091 205 283 3.5E-31 T 22-04-2016 IPR005170 Transporter-associated domain APT61_RS16345 35c1394127c9a1717036bbbf6933ce59 292 Gene3D G3DSA:3.30.465.10 197 283 6.9E-32 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APT61_RS16345 35c1394127c9a1717036bbbf6933ce59 292 Pfam PF00571 CBS domain 140 189 2.8E-5 T 22-04-2016 IPR000644 CBS domain APT61_RS16345 35c1394127c9a1717036bbbf6933ce59 292 Pfam PF00571 CBS domain 69 124 6.1E-8 T 22-04-2016 IPR000644 CBS domain APT61_RS16345 35c1394127c9a1717036bbbf6933ce59 292 PANTHER PTHR22777:SF17 18 288 1.2E-131 T 22-04-2016 APT61_RS16345 35c1394127c9a1717036bbbf6933ce59 292 SMART SM00116 78 127 4.2 T 22-04-2016 IPR000644 CBS domain APT61_RS16345 35c1394127c9a1717036bbbf6933ce59 292 SMART SM00116 141 189 1.1 T 22-04-2016 IPR000644 CBS domain APT61_RS16345 35c1394127c9a1717036bbbf6933ce59 292 PANTHER PTHR22777 18 288 1.2E-131 T 22-04-2016 APT61_RS16345 35c1394127c9a1717036bbbf6933ce59 292 Pfam PF03471 Transporter associated domain 206 281 2.4E-23 T 22-04-2016 IPR005170 Transporter-associated domain APT61_RS16345 35c1394127c9a1717036bbbf6933ce59 292 SUPERFAMILY SSF54631 66 202 4.67E-33 T 22-04-2016 APT61_RS16345 35c1394127c9a1717036bbbf6933ce59 292 Gene3D G3DSA:3.10.580.10 55 196 1.6E-23 T 22-04-2016 APT61_RS12285 4ee721c00c94d0df948fb808f9c0472a 1015 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 650 967 6.8E-47 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APT61_RS12285 4ee721c00c94d0df948fb808f9c0472a 1015 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 784 859 3.3E-20 T 22-04-2016 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal APT61_RS12285 4ee721c00c94d0df948fb808f9c0472a 1015 Pfam PF06791 Prophage tail length tape measure protein 214 423 5.1E-53 T 22-04-2016 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal APT61_RS20185 75cabeed28d61954890ac7c587751913 220 PANTHER PTHR36438:SF1 1 220 3.0E-105 T 22-04-2016 APT61_RS20185 75cabeed28d61954890ac7c587751913 220 Pfam PF04405 Domain of Unknown function (DUF542) 5 58 8.0E-20 T 22-04-2016 IPR019903 Repair of iron centres family APT61_RS20185 75cabeed28d61954890ac7c587751913 220 Gene3D G3DSA:1.20.120.520 78 217 7.4E-26 T 22-04-2016 APT61_RS20185 75cabeed28d61954890ac7c587751913 220 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 216 8.5E-80 T 22-04-2016 IPR019903 Repair of iron centres family APT61_RS20185 75cabeed28d61954890ac7c587751913 220 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 220 51.22 T 22-04-2016 IPR023742 Iron-sulfur cluster repair protein YftE GO:0006950|GO:0030091 APT61_RS20185 75cabeed28d61954890ac7c587751913 220 PANTHER PTHR36438 1 220 3.0E-105 T 22-04-2016 APT61_RS20185 75cabeed28d61954890ac7c587751913 220 Pfam PF01814 Hemerythrin HHE cation binding domain 77 216 6.6E-26 T 22-04-2016 IPR012312 Haemerythrin-like APT61_RS07370 719a72fc79a1510758fe4618ebaa0fbb 305 SUPERFAMILY SSF53850 25 304 6.15E-60 T 22-04-2016 APT61_RS07370 719a72fc79a1510758fe4618ebaa0fbb 305 PANTHER PTHR30177:SF12 25 304 1.1E-136 T 22-04-2016 APT61_RS07370 719a72fc79a1510758fe4618ebaa0fbb 305 Gene3D G3DSA:3.40.190.10 254 305 1.4E-57 T 22-04-2016 APT61_RS07370 719a72fc79a1510758fe4618ebaa0fbb 305 Gene3D G3DSA:3.40.190.10 23 133 1.4E-57 T 22-04-2016 APT61_RS07370 719a72fc79a1510758fe4618ebaa0fbb 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 300 1.3E-60 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 APT61_RS07370 719a72fc79a1510758fe4618ebaa0fbb 305 Gene3D G3DSA:3.40.190.120 134 241 3.5E-27 T 22-04-2016 APT61_RS07370 719a72fc79a1510758fe4618ebaa0fbb 305 PANTHER PTHR30177 25 304 1.1E-136 T 22-04-2016 APT61_RS21580 f92421fbd7daa6be1195074e5d45d22c 427 PANTHER PTHR21666:SF213 6 427 2.4E-195 T 22-04-2016 APT61_RS21580 f92421fbd7daa6be1195074e5d45d22c 427 PANTHER PTHR21666 6 427 2.4E-195 T 22-04-2016 APT61_RS21580 f92421fbd7daa6be1195074e5d45d22c 427 Gene3D G3DSA:2.70.70.10 290 426 4.4E-36 T 22-04-2016 APT61_RS21580 f92421fbd7daa6be1195074e5d45d22c 427 Pfam PF01551 Peptidase family M23 328 421 1.4E-25 T 22-04-2016 IPR016047 Peptidase M23 APT61_RS21580 f92421fbd7daa6be1195074e5d45d22c 427 SUPERFAMILY SSF51261 244 425 5.75E-45 T 22-04-2016 IPR011055 Duplicated hybrid motif APT61_RS19590 c61d621166834b1ac41962dec10b61d5 471 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APT61_RS19590 c61d621166834b1ac41962dec10b61d5 471 PANTHER PTHR11699 9 470 5.6E-180 T 22-04-2016 APT61_RS19590 c61d621166834b1ac41962dec10b61d5 471 Gene3D G3DSA:3.40.605.10 6 257 1.1E-75 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS19590 c61d621166834b1ac41962dec10b61d5 471 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 243 250 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APT61_RS19590 c61d621166834b1ac41962dec10b61d5 471 SUPERFAMILY SSF53720 5 469 6.54E-148 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS19590 c61d621166834b1ac41962dec10b61d5 471 Pfam PF00171 Aldehyde dehydrogenase family 15 468 4.6E-153 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS19590 c61d621166834b1ac41962dec10b61d5 471 Gene3D G3DSA:3.40.309.10 258 444 9.6E-66 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 PANTHER PTHR23522:SF3 1 410 1.3E-46 T 22-04-2016 APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 SUPERFAMILY SSF103473 5 398 1.7E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 PANTHER PTHR23522 1 410 1.3E-46 T 22-04-2016 APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 PRINTS PR00174 LacY proton/sugar symporter family signature 144 162 1.0E-64 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 PRINTS PR00174 LacY proton/sugar symporter family signature 67 96 1.0E-64 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 PRINTS PR00174 LacY proton/sugar symporter family signature 277 303 1.0E-64 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 PRINTS PR00174 LacY proton/sugar symporter family signature 207 235 1.0E-64 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 PRINTS PR00174 LacY proton/sugar symporter family signature 253 274 1.0E-64 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 PRINTS PR00174 LacY proton/sugar symporter family signature 102 124 1.0E-64 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 PRINTS PR00174 LacY proton/sugar symporter family signature 308 327 1.0E-64 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 PRINTS PR00174 LacY proton/sugar symporter family signature 339 359 1.0E-64 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 Pfam PF01306 LacY proton/sugar symporter 5 400 3.3E-117 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 6 392 3.1E-117 T 22-04-2016 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 Gene3D G3DSA:1.20.1250.20 5 195 3.4E-31 T 22-04-2016 APT61_RS09135 f688bb48b00b30b11893bcf139360685 410 Gene3D G3DSA:1.20.1250.20 205 398 1.3E-37 T 22-04-2016 APT61_RS10235 da48d43e917f6a8a51e6cf5711bcd836 444 Gene3D G3DSA:3.40.640.10 117 336 8.0E-67 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS10235 da48d43e917f6a8a51e6cf5711bcd836 444 SMART SM00345 8 67 2.4E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS10235 da48d43e917f6a8a51e6cf5711bcd836 444 SUPERFAMILY SSF46785 4 70 4.12E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10235 da48d43e917f6a8a51e6cf5711bcd836 444 SUPERFAMILY SSF53383 84 438 8.2E-81 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS10235 da48d43e917f6a8a51e6cf5711bcd836 444 Gene3D G3DSA:1.10.10.10 3 69 1.0E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS10235 da48d43e917f6a8a51e6cf5711bcd836 444 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 1.1E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS10235 da48d43e917f6a8a51e6cf5711bcd836 444 PANTHER PTHR11751 86 439 1.5E-65 T 22-04-2016 APT61_RS10235 da48d43e917f6a8a51e6cf5711bcd836 444 Pfam PF00155 Aminotransferase class I and II 85 433 1.1E-32 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS10235 da48d43e917f6a8a51e6cf5711bcd836 444 Gene3D G3DSA:3.90.1150.10 339 441 1.6E-4 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS14480 1368a9f0d38bda7d3eabe235c6fa6b33 290 Pfam PF03466 LysR substrate binding domain 92 283 4.9E-24 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS14480 1368a9f0d38bda7d3eabe235c6fa6b33 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 69 4.3E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS14480 1368a9f0d38bda7d3eabe235c6fa6b33 290 Gene3D G3DSA:3.40.190.10 199 244 2.8E-8 T 22-04-2016 APT61_RS14480 1368a9f0d38bda7d3eabe235c6fa6b33 290 Gene3D G3DSA:3.40.190.10 90 198 1.1E-15 T 22-04-2016 APT61_RS14480 1368a9f0d38bda7d3eabe235c6fa6b33 290 PANTHER PTHR30579:SF0 6 251 1.7E-51 T 22-04-2016 APT61_RS14480 1368a9f0d38bda7d3eabe235c6fa6b33 290 PANTHER PTHR30579 6 251 1.7E-51 T 22-04-2016 APT61_RS14480 1368a9f0d38bda7d3eabe235c6fa6b33 290 SUPERFAMILY SSF53850 93 248 4.71E-22 T 22-04-2016 APT61_RS14480 1368a9f0d38bda7d3eabe235c6fa6b33 290 Gene3D G3DSA:1.10.10.10 8 86 1.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS14480 1368a9f0d38bda7d3eabe235c6fa6b33 290 SUPERFAMILY SSF46785 7 116 5.39E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS13690 9a044ceb229334e8cd8c2ee60273ab7f 338 Pfam PF06147 Protein of unknown function (DUF968) 130 335 8.4E-72 T 22-04-2016 IPR010373 Protein of unknown function DUF968 APT61_RS18900 1c08b8718540b9830767c0b519f203b3 159 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 22-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APT61_RS18900 1c08b8718540b9830767c0b519f203b3 159 Gene3D G3DSA:3.40.430.10 1 159 4.4E-60 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain APT61_RS18900 1c08b8718540b9830767c0b519f203b3 159 PANTHER PTHR22778 1 159 3.8E-49 T 22-04-2016 APT61_RS18900 1c08b8718540b9830767c0b519f203b3 159 SUPERFAMILY SSF53597 1 159 7.43E-57 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain APT61_RS18900 1c08b8718540b9830767c0b519f203b3 159 PRINTS PR00070 Dihydrofolate reductase signature 40 51 5.4E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APT61_RS18900 1c08b8718540b9830767c0b519f203b3 159 PRINTS PR00070 Dihydrofolate reductase signature 90 104 5.4E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APT61_RS18900 1c08b8718540b9830767c0b519f203b3 159 PRINTS PR00070 Dihydrofolate reductase signature 27 35 5.4E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APT61_RS18900 1c08b8718540b9830767c0b519f203b3 159 PRINTS PR00070 Dihydrofolate reductase signature 13 23 5.4E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APT61_RS18900 1c08b8718540b9830767c0b519f203b3 159 Pfam PF00186 Dihydrofolate reductase 1 158 1.0E-59 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APT61_RS18900 1c08b8718540b9830767c0b519f203b3 159 PANTHER PTHR22778:SF16 1 159 3.8E-49 T 22-04-2016 APT61_RS18900 1c08b8718540b9830767c0b519f203b3 159 PIRSF PIRSF000194 1 159 4.2E-58 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 APT61_RS02710 7cd8d4f0a37e7413a4b4bbac0a5b0e79 94 SUPERFAMILY SSF47413 3 71 8.44E-29 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS02710 7cd8d4f0a37e7413a4b4bbac0a5b0e79 94 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 2.7E-35 T 22-04-2016 APT61_RS02710 7cd8d4f0a37e7413a4b4bbac0a5b0e79 94 Gene3D G3DSA:1.10.260.40 6 72 1.1E-37 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS16915 eed8d180553326b6448e3a0ff4804d8f 99 Pfam PF13744 Helix-turn-helix domain 12 87 1.6E-12 T 22-04-2016 APT61_RS16915 eed8d180553326b6448e3a0ff4804d8f 99 SUPERFAMILY SSF47413 25 87 6.97E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS16915 eed8d180553326b6448e3a0ff4804d8f 99 Gene3D G3DSA:1.10.260.40 24 84 1.1E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS16915 eed8d180553326b6448e3a0ff4804d8f 99 SMART SM00530 31 86 1.5E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS21160 1584573d49d88da0e5cec03bdca64ebd 251 PANTHER PTHR10953:SF158 1 244 4.9E-132 T 22-04-2016 APT61_RS21160 1584573d49d88da0e5cec03bdca64ebd 251 Pfam PF00899 ThiF family 9 240 4.4E-63 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APT61_RS21160 1584573d49d88da0e5cec03bdca64ebd 251 SUPERFAMILY SSF69572 2 245 5.49E-81 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 APT61_RS21160 1584573d49d88da0e5cec03bdca64ebd 251 PANTHER PTHR10953 1 244 4.9E-132 T 22-04-2016 APT61_RS21160 1584573d49d88da0e5cec03bdca64ebd 251 Gene3D G3DSA:3.40.50.720 3 244 8.0E-74 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS03370 6623cf5ea260e526813263166e53b447 119 PANTHER PTHR35862:SF2 4 118 7.4E-38 T 22-04-2016 APT61_RS03370 6623cf5ea260e526813263166e53b447 119 Gene3D G3DSA:3.10.450.40 9 116 2.3E-35 T 22-04-2016 APT61_RS03370 6623cf5ea260e526813263166e53b447 119 PANTHER PTHR35862 4 118 7.4E-38 T 22-04-2016 APT61_RS03370 6623cf5ea260e526813263166e53b447 119 Pfam PF04965 Gene 25-like lysozyme 18 92 2.2E-14 T 22-04-2016 IPR007048 GpW/Gp25/anti-adapter protein IraD APT61_RS03370 6623cf5ea260e526813263166e53b447 119 SUPERFAMILY SSF160719 12 112 6.15E-27 T 22-04-2016 APT61_RS15340 1b56e9014f96ed48de6e4c9a3e7cdafb 240 PANTHER PTHR23026 1 185 2.6E-77 T 22-04-2016 APT61_RS15340 1b56e9014f96ed48de6e4c9a3e7cdafb 240 Gene3D G3DSA:3.40.109.10 2 239 2.1E-74 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APT61_RS15340 1b56e9014f96ed48de6e4c9a3e7cdafb 240 SUPERFAMILY SSF55469 1 239 5.23E-73 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 APT61_RS15340 1b56e9014f96ed48de6e4c9a3e7cdafb 240 PANTHER PTHR23026:SF98 1 185 2.6E-77 T 22-04-2016 APT61_RS15340 1b56e9014f96ed48de6e4c9a3e7cdafb 240 Pfam PF00881 Nitroreductase family 9 159 5.1E-16 T 22-04-2016 IPR029479 Nitroreductase APT61_RS15340 1b56e9014f96ed48de6e4c9a3e7cdafb 240 PIRSF PIRSF005426 1 240 1.6E-83 T 22-04-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 APT61_RS08270 b8a0ca97ca8dd31a9a5022d497bb85b9 93 Pfam PF00403 Heavy-metal-associated domain 24 83 1.7E-9 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APT61_RS08270 b8a0ca97ca8dd31a9a5022d497bb85b9 93 Gene3D G3DSA:3.30.70.100 20 87 2.2E-17 T 22-04-2016 APT61_RS08270 b8a0ca97ca8dd31a9a5022d497bb85b9 93 PRINTS PR00946 Mercury scavenger protein signature 74 88 3.2E-10 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 APT61_RS08270 b8a0ca97ca8dd31a9a5022d497bb85b9 93 PRINTS PR00946 Mercury scavenger protein signature 19 30 3.2E-10 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 APT61_RS08270 b8a0ca97ca8dd31a9a5022d497bb85b9 93 PRINTS PR00946 Mercury scavenger protein signature 30 46 3.2E-10 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 APT61_RS08270 b8a0ca97ca8dd31a9a5022d497bb85b9 93 PRINTS PR00946 Mercury scavenger protein signature 46 61 3.2E-10 T 22-04-2016 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 APT61_RS08270 b8a0ca97ca8dd31a9a5022d497bb85b9 93 SUPERFAMILY SSF55008 18 89 4.45E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 APT61_RS11270 ba2ccb5adf5603faa7180bc73bcc1b3d 418 Pfam PF07690 Major Facilitator Superfamily 19 357 3.0E-34 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS11270 ba2ccb5adf5603faa7180bc73bcc1b3d 418 PANTHER PTHR23513 16 402 6.7E-55 T 22-04-2016 APT61_RS11270 ba2ccb5adf5603faa7180bc73bcc1b3d 418 Gene3D G3DSA:1.20.1250.20 16 197 7.5E-21 T 22-04-2016 APT61_RS11270 ba2ccb5adf5603faa7180bc73bcc1b3d 418 SUPERFAMILY SSF103473 15 396 1.31E-43 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS11270 ba2ccb5adf5603faa7180bc73bcc1b3d 418 Gene3D G3DSA:1.20.1250.20 218 404 4.6E-11 T 22-04-2016 APT61_RS09880 9e55de1bd60d351c3bda1d9116d9d72d 528 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 29 485 5.3E-107 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 APT61_RS09880 9e55de1bd60d351c3bda1d9116d9d72d 528 Pfam PF06812 ImpA, N-terminal, type VI secretion system 34 138 5.1E-20 T 22-04-2016 IPR010657 ImpA, N-terminal APT61_RS09880 9e55de1bd60d351c3bda1d9116d9d72d 528 PANTHER PTHR37024 2 522 6.3E-136 T 22-04-2016 APT61_RS09880 9e55de1bd60d351c3bda1d9116d9d72d 528 PANTHER PTHR37024:SF1 2 522 6.3E-136 T 22-04-2016 APT61_RS09880 9e55de1bd60d351c3bda1d9116d9d72d 528 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 227 485 7.5E-78 T 22-04-2016 IPR017739 Type VI secretion system-associated, VCA0119 APT61_RS07835 478b78e1fdc195206f372bae1c57aaf5 245 Pfam PF00977 Histidine biosynthesis protein 1 234 2.2E-74 T 22-04-2016 IPR006062 Histidine biosynthesis GO:0000105 APT61_RS07835 478b78e1fdc195206f372bae1c57aaf5 245 Gene3D G3DSA:3.20.20.70 1 243 1.6E-78 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS07835 478b78e1fdc195206f372bae1c57aaf5 245 PANTHER PTHR21235 1 244 1.9E-114 T 22-04-2016 APT61_RS07835 478b78e1fdc195206f372bae1c57aaf5 245 SUPERFAMILY SSF51366 1 243 2.22E-65 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APT61_RS07835 478b78e1fdc195206f372bae1c57aaf5 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.1E-78 T 22-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 APT61_RS07835 478b78e1fdc195206f372bae1c57aaf5 245 PANTHER PTHR21235:SF15 1 244 1.9E-114 T 22-04-2016 APT61_RS07835 478b78e1fdc195206f372bae1c57aaf5 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.557 T 22-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 APT61_RS19715 f688a42f20de938a409c5194062395f0 141 SUPERFAMILY SSF54593 1 136 8.53E-31 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS19715 f688a42f20de938a409c5194062395f0 141 Gene3D G3DSA:3.10.180.10 1 123 5.5E-30 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS19715 f688a42f20de938a409c5194062395f0 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 114 4.7E-13 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APT61_RS19715 f688a42f20de938a409c5194062395f0 141 PANTHER PTHR10374 1 115 1.1E-28 T 22-04-2016 APT61_RS19715 f688a42f20de938a409c5194062395f0 141 PANTHER PTHR10374:SF9 1 115 1.1E-28 T 22-04-2016 APT61_RS10715 58cfeb37d2583c38af60712a4f10ce57 720 Pfam PF10139 Putative bacterial virulence factor 12 412 9.2E-57 T 22-04-2016 IPR017030 Virulence effector, SrfC APT61_RS10715 58cfeb37d2583c38af60712a4f10ce57 720 Pfam PF10139 Putative bacterial virulence factor 411 718 3.2E-27 T 22-04-2016 IPR017030 Virulence effector, SrfC APT61_RS20955 c1d70ca6c39904655c966dc81f9903e5 809 SUPERFAMILY SSF69593 243 488 3.66E-24 T 22-04-2016 APT61_RS20955 c1d70ca6c39904655c966dc81f9903e5 809 SMART SM00563 300 427 7.8E-28 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APT61_RS20955 c1d70ca6c39904655c966dc81f9903e5 809 PIRSF PIRSF500064 2 809 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APT61_RS20955 c1d70ca6c39904655c966dc81f9903e5 809 PANTHER PTHR12563:SF14 144 809 0.0 T 22-04-2016 APT61_RS20955 c1d70ca6c39904655c966dc81f9903e5 809 PANTHER PTHR12563:SF14 1 117 0.0 T 22-04-2016 APT61_RS20955 c1d70ca6c39904655c966dc81f9903e5 809 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APT61_RS20955 c1d70ca6c39904655c966dc81f9903e5 809 PANTHER PTHR12563 144 809 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APT61_RS20955 c1d70ca6c39904655c966dc81f9903e5 809 PANTHER PTHR12563 1 117 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APT61_RS20955 c1d70ca6c39904655c966dc81f9903e5 809 PIRSF PIRSF000437 19 809 0.0 T 22-04-2016 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APT61_RS20955 c1d70ca6c39904655c966dc81f9903e5 809 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 33.24 T 22-04-2016 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00557 APT61_RS20955 c1d70ca6c39904655c966dc81f9903e5 809 Pfam PF01553 Acyltransferase 282 424 3.8E-26 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APT61_RS20785 b8f83839a89b877fcd8efa6fc382d908 104 PANTHER PTHR38598 2 104 8.5E-49 T 22-04-2016 APT61_RS20785 b8f83839a89b877fcd8efa6fc382d908 104 Pfam PF04341 Protein of unknown function, DUF485 11 98 5.9E-34 T 22-04-2016 IPR007436 Protein of unknown function DUF485 APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 PANTHER PTHR24322:SF649 150 188 1.3E-34 T 22-04-2016 APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 PANTHER PTHR24322:SF649 6 134 1.3E-34 T 22-04-2016 APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 6.3E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 6.3E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 6.3E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 2.1E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.1E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 2.1E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.1E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 2.1E-17 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 Pfam PF00106 short chain dehydrogenase 3 189 7.7E-42 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 Gene3D G3DSA:3.40.50.720 3 253 1.6E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 SUPERFAMILY SSF51735 3 255 6.11E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 PANTHER PTHR24322 150 188 1.3E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS05335 5364419eb440291cfbe7d303cd9cdf06 328 PANTHER PTHR24322 6 134 1.3E-34 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS12335 bce133a6803b0bf9887374dc6f7bc043 378 Pfam PF11651 P22 coat protein - gene protein 5 114 265 2.2E-15 T 22-04-2016 IPR024659 Major capsid protein Gp5 APT61_RS03130 47b00951040ef8339d1ee97a92af676c 333 Gene3D G3DSA:3.40.50.2300 148 281 5.9E-33 T 22-04-2016 APT61_RS03130 47b00951040ef8339d1ee97a92af676c 333 PANTHER PTHR32196 15 324 1.7E-152 T 22-04-2016 APT61_RS03130 47b00951040ef8339d1ee97a92af676c 333 SUPERFAMILY SSF53822 21 333 2.36E-85 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS03130 47b00951040ef8339d1ee97a92af676c 333 Gene3D G3DSA:3.40.50.2300 22 147 1.3E-28 T 22-04-2016 APT61_RS03130 47b00951040ef8339d1ee97a92af676c 333 PANTHER PTHR32196:SF1 15 324 1.7E-152 T 22-04-2016 IPR030159 Autoinducer 2-binding protein LsrB/rhamnose-binding protein RhaS GO:0043190 APT61_RS03130 47b00951040ef8339d1ee97a92af676c 333 Pfam PF13407 Periplasmic binding protein domain 23 278 2.0E-53 T 22-04-2016 IPR025997 Periplasmic binding protein APT61_RS11365 f7677c01ab17de4dc1513f1f52ee886e 489 SMART SM00345 23 82 2.1E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS11365 f7677c01ab17de4dc1513f1f52ee886e 489 Pfam PF00155 Aminotransferase class I and II 162 433 8.3E-18 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS11365 f7677c01ab17de4dc1513f1f52ee886e 489 SUPERFAMILY SSF53383 132 489 6.27E-79 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS11365 f7677c01ab17de4dc1513f1f52ee886e 489 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 56 2.8E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS11365 f7677c01ab17de4dc1513f1f52ee886e 489 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 56 72 2.8E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS11365 f7677c01ab17de4dc1513f1f52ee886e 489 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 82 2.0E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS11365 f7677c01ab17de4dc1513f1f52ee886e 489 PANTHER PTHR11751 113 489 9.1E-102 T 22-04-2016 APT61_RS11365 f7677c01ab17de4dc1513f1f52ee886e 489 Gene3D G3DSA:3.40.640.10 169 381 1.2E-51 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS11365 f7677c01ab17de4dc1513f1f52ee886e 489 SUPERFAMILY SSF46785 21 86 3.23E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11365 f7677c01ab17de4dc1513f1f52ee886e 489 Gene3D G3DSA:1.10.10.10 20 86 3.2E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11365 f7677c01ab17de4dc1513f1f52ee886e 489 PANTHER PTHR11751:SF10 113 489 9.1E-102 T 22-04-2016 APT61_RS07230 6411c48faf85a3ab66fac01a150e44d7 656 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 37 - T 22-04-2016 IPR010916 TonB box, conserved site APT61_RS07230 6411c48faf85a3ab66fac01a150e44d7 656 Gene3D G3DSA:2.170.130.10 40 156 8.2E-45 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS07230 6411c48faf85a3ab66fac01a150e44d7 656 Gene3D G3DSA:2.40.170.20 157 656 7.5E-112 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS07230 6411c48faf85a3ab66fac01a150e44d7 656 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 639 656 - T 22-04-2016 IPR010917 TonB-dependent receptor, conserved site APT61_RS07230 6411c48faf85a3ab66fac01a150e44d7 656 Pfam PF07715 TonB-dependent Receptor Plug Domain 43 151 9.9E-33 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 APT61_RS07230 6411c48faf85a3ab66fac01a150e44d7 656 Pfam PF00593 TonB dependent receptor 394 655 8.0E-39 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 APT61_RS07230 6411c48faf85a3ab66fac01a150e44d7 656 PANTHER PTHR30069:SF2 30 557 1.3E-114 T 22-04-2016 APT61_RS07230 6411c48faf85a3ab66fac01a150e44d7 656 PANTHER PTHR30069 30 557 1.3E-114 T 22-04-2016 APT61_RS07230 6411c48faf85a3ab66fac01a150e44d7 656 SUPERFAMILY SSF56935 30 656 1.54E-129 T 22-04-2016 APT61_RS14560 3c008edaf46881dc1308bc656c0e1807 382 PANTHER PTHR13789 12 380 3.0E-56 T 22-04-2016 APT61_RS14560 3c008edaf46881dc1308bc656c0e1807 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 10 32 1.94E-10 T 22-04-2016 APT61_RS14560 3c008edaf46881dc1308bc656c0e1807 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 146 161 1.94E-10 T 22-04-2016 APT61_RS14560 3c008edaf46881dc1308bc656c0e1807 382 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 306 321 1.94E-10 T 22-04-2016 APT61_RS14560 3c008edaf46881dc1308bc656c0e1807 382 PANTHER PTHR13789:SF107 12 380 3.0E-56 T 22-04-2016 APT61_RS14560 3c008edaf46881dc1308bc656c0e1807 382 Gene3D G3DSA:3.50.50.60 8 172 1.5E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS14560 3c008edaf46881dc1308bc656c0e1807 382 Gene3D G3DSA:3.50.50.60 294 359 1.5E-23 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS14560 3c008edaf46881dc1308bc656c0e1807 382 Pfam PF01494 FAD binding domain 11 342 3.5E-12 T 22-04-2016 IPR002938 FAD-binding domain GO:0071949 APT61_RS14560 3c008edaf46881dc1308bc656c0e1807 382 SUPERFAMILY SSF54373 169 299 2.16E-37 T 22-04-2016 APT61_RS14560 3c008edaf46881dc1308bc656c0e1807 382 SUPERFAMILY SSF51905 8 170 2.95E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS14560 3c008edaf46881dc1308bc656c0e1807 382 SUPERFAMILY SSF51905 301 376 2.95E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS10215 94e4a71f3bad14eaef2be6d9f40fe00a 175 PANTHER PTHR30529:SF4 1 175 5.2E-129 T 22-04-2016 APT61_RS10215 94e4a71f3bad14eaef2be6d9f40fe00a 175 SUPERFAMILY SSF81342 4 172 3.53E-25 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APT61_RS10215 94e4a71f3bad14eaef2be6d9f40fe00a 175 PANTHER PTHR30529 1 175 5.2E-129 T 22-04-2016 APT61_RS10215 94e4a71f3bad14eaef2be6d9f40fe00a 175 Pfam PF01292 Prokaryotic cytochrome b561 5 172 2.1E-18 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APT61_RS16155 fbb16095b5f3be0be78cf5f853aed43d 244 PANTHER PTHR30292:SF0 1 244 8.8E-126 T 22-04-2016 APT61_RS16155 fbb16095b5f3be0be78cf5f853aed43d 244 Pfam PF03746 LamB/YcsF family 3 235 1.9E-93 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF APT61_RS16155 fbb16095b5f3be0be78cf5f853aed43d 244 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 43.215 T 22-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF APT61_RS16155 fbb16095b5f3be0be78cf5f853aed43d 244 PANTHER PTHR30292 1 244 8.8E-126 T 22-04-2016 APT61_RS16155 fbb16095b5f3be0be78cf5f853aed43d 244 SUPERFAMILY SSF88713 2 242 5.11E-92 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 APT61_RS20410 667b1cb7a03a667dd2f093f90d815361 62 ProDom PD069399 MEMBRANE INNER YJEO SIMILAR INTEGRAL ORF22 ESCHERICHIA TRANSMEMBRANE COLI 1 60 4.0E-11 T 22-04-2016 IPR022553 Protein of unknown function DUF2645 APT61_RS20410 667b1cb7a03a667dd2f093f90d815361 62 Pfam PF10840 Protein of unknown function (DUF2645) 3 60 1.6E-11 T 22-04-2016 IPR022553 Protein of unknown function DUF2645 APT61_RS12835 87b37ffd694594c1a46d1386acb7df2d 160 Pfam PF03928 Haem-degrading 29 154 2.0E-26 T 22-04-2016 IPR005624 Haem-degrading APT61_RS12835 87b37ffd694594c1a46d1386acb7df2d 160 PANTHER PTHR34309:SF1 4 155 2.3E-29 T 22-04-2016 APT61_RS12835 87b37ffd694594c1a46d1386acb7df2d 160 SUPERFAMILY SSF143744 23 156 8.76E-33 T 22-04-2016 APT61_RS12835 87b37ffd694594c1a46d1386acb7df2d 160 PANTHER PTHR34309 4 155 2.3E-29 T 22-04-2016 APT61_RS19255 ae0de2ef1af2931cde1e34858c15e8e2 258 Pfam PF06738 Putative threonine/serine exporter 13 252 4.4E-69 T 22-04-2016 IPR010619 Putative threonine/serine exporter APT61_RS19255 ae0de2ef1af2931cde1e34858c15e8e2 258 PANTHER PTHR34390 1 257 4.6E-146 T 22-04-2016 APT61_RS19255 ae0de2ef1af2931cde1e34858c15e8e2 258 PANTHER PTHR34390:SF2 1 257 4.6E-146 T 22-04-2016 APT61_RS11740 cd7a87288469821eb7af11d02f5ff8b2 101 Pfam PF06649 Protein of unknown function (DUF1161) 26 79 2.4E-20 T 22-04-2016 IPR010595 Protein of unknown function DUF1161 APT61_RS11740 cd7a87288469821eb7af11d02f5ff8b2 101 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 23 79 8.0E-22 T 22-04-2016 IPR010595 Protein of unknown function DUF1161 APT61_RS12525 1185b7454bbf3e6d3080be5599fbcdcb 346 PANTHER PTHR22604 1 343 3.1E-142 T 22-04-2016 APT61_RS12525 1185b7454bbf3e6d3080be5599fbcdcb 346 SUPERFAMILY SSF51735 2 190 2.76E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS12525 1185b7454bbf3e6d3080be5599fbcdcb 346 Gene3D G3DSA:3.40.50.720 1 130 1.2E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS12525 1185b7454bbf3e6d3080be5599fbcdcb 346 PANTHER PTHR22604:SF53 1 343 3.1E-142 T 22-04-2016 APT61_RS12525 1185b7454bbf3e6d3080be5599fbcdcb 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 3.2E-15 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APT61_RS12525 1185b7454bbf3e6d3080be5599fbcdcb 346 Gene3D G3DSA:3.30.360.10 131 339 1.2E-31 T 22-04-2016 APT61_RS12525 1185b7454bbf3e6d3080be5599fbcdcb 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 4.1E-26 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APT61_RS14745 5582971ba4adf1513afaafb2499ef3a1 684 Gene3D G3DSA:3.40.50.300 196 333 2.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14745 5582971ba4adf1513afaafb2499ef3a1 684 Gene3D G3DSA:3.40.50.300 395 492 2.4E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14745 5582971ba4adf1513afaafb2499ef3a1 684 PANTHER PTHR11070 99 677 0.0 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 APT61_RS14745 5582971ba4adf1513afaafb2499ef3a1 684 Gene3D G3DSA:3.40.50.300 501 675 3.3E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14745 5582971ba4adf1513afaafb2499ef3a1 684 SUPERFAMILY SSF52540 195 330 6.95E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14745 5582971ba4adf1513afaafb2499ef3a1 684 SUPERFAMILY SSF52540 385 676 6.95E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14745 5582971ba4adf1513afaafb2499ef3a1 684 Pfam PF13361 UvrD-like helicase C-terminal domain 542 663 4.2E-14 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 APT61_RS14745 5582971ba4adf1513afaafb2499ef3a1 684 PANTHER PTHR11070:SF26 99 677 0.0 T 22-04-2016 APT61_RS14745 5582971ba4adf1513afaafb2499ef3a1 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 4.8E-61 T 22-04-2016 IPR022161 DNA helicase IV, N-terminal domain APT61_RS14745 5582971ba4adf1513afaafb2499ef3a1 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 488 3.7E-42 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 APT61_RS09065 cae2e881be48767dec5bbc65594a5c39 94 SUPERFAMILY SSF54909 1 93 6.43E-38 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS09065 cae2e881be48767dec5bbc65594a5c39 94 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 1.3E-44 T 22-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 APT61_RS09065 cae2e881be48767dec5bbc65594a5c39 94 Pfam PF02426 Muconolactone delta-isomerase 1 90 1.1E-41 T 22-04-2016 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 APT61_RS09065 cae2e881be48767dec5bbc65594a5c39 94 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 3.0E-14 T 22-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 APT61_RS09065 cae2e881be48767dec5bbc65594a5c39 94 PIRSF PIRSF001486 1 94 8.1E-48 T 22-04-2016 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185|UniPathway: UPA00157 APT61_RS10125 c6b2e2fa7f9ca001d9e84dc6c3deb159 372 Pfam PF10129 OpgC protein 1 365 1.3E-56 T 22-04-2016 IPR014550 Uncharacterised conserved protein UCP028704, OpgC APT61_RS10125 c6b2e2fa7f9ca001d9e84dc6c3deb159 372 PANTHER PTHR38592 1 371 1.9E-20 T 22-04-2016 APT61_RS20705 29249b493c37575df4a8c311dfae480f 144 Pfam PF00583 Acetyltransferase (GNAT) family 52 134 4.1E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS20705 29249b493c37575df4a8c311dfae480f 144 SUPERFAMILY SSF55729 3 139 4.9E-27 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS20705 29249b493c37575df4a8c311dfae480f 144 PANTHER PTHR23091 1 133 2.3E-81 T 22-04-2016 APT61_RS20705 29249b493c37575df4a8c311dfae480f 144 PANTHER PTHR23091:SF230 1 133 2.3E-81 T 22-04-2016 APT61_RS20705 29249b493c37575df4a8c311dfae480f 144 Gene3D G3DSA:3.40.630.30 2 142 5.9E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS19595 756e3b9b634119c4369d9fec98f760bf 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 65 1.9E-18 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 APT61_RS19595 756e3b9b634119c4369d9fec98f760bf 300 Gene3D G3DSA:1.10.10.10 8 83 1.8E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19595 756e3b9b634119c4369d9fec98f760bf 300 PANTHER PTHR30537 1 294 1.3E-120 T 22-04-2016 APT61_RS19595 756e3b9b634119c4369d9fec98f760bf 300 Gene3D G3DSA:3.40.190.10 84 129 5.5E-4 T 22-04-2016 APT61_RS19595 756e3b9b634119c4369d9fec98f760bf 300 SUPERFAMILY SSF46785 9 112 4.21E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19595 756e3b9b634119c4369d9fec98f760bf 300 Gene3D G3DSA:3.40.190.10 163 264 2.1E-20 T 22-04-2016 APT61_RS19595 756e3b9b634119c4369d9fec98f760bf 300 Pfam PF03466 LysR substrate binding domain 90 295 3.9E-39 T 22-04-2016 IPR005119 LysR, substrate-binding APT61_RS19595 756e3b9b634119c4369d9fec98f760bf 300 PANTHER PTHR30537:SF28 1 294 1.3E-120 T 22-04-2016 APT61_RS19595 756e3b9b634119c4369d9fec98f760bf 300 SUPERFAMILY SSF53850 89 295 3.08E-41 T 22-04-2016 APT61_RS14255 3be89a0fd5379c1bb4bbd731d1da9344 163 Pfam PF06496 Protein of unknown function (DUF1097) 11 145 1.0E-38 T 22-04-2016 IPR009476 Protein of unknown function DUF1097 APT61_RS21980 1ed37af091cb1a34719b912c56ce8e24 148 Pfam PF13673 Acetyltransferase (GNAT) domain 39 138 5.0E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS21980 1ed37af091cb1a34719b912c56ce8e24 148 Gene3D G3DSA:3.40.630.30 31 134 5.8E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS21980 1ed37af091cb1a34719b912c56ce8e24 148 SUPERFAMILY SSF55729 11 134 1.39E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS11530 d30bbfa7e228f4079c91c86bffc11d41 389 PANTHER PTHR33307 331 382 6.0E-80 T 22-04-2016 APT61_RS11530 d30bbfa7e228f4079c91c86bffc11d41 389 PANTHER PTHR33307 30 284 6.0E-80 T 22-04-2016 APT61_RS11530 d30bbfa7e228f4079c91c86bffc11d41 389 Gene3D G3DSA:2.120.10.10 27 273 3.5E-68 T 22-04-2016 IPR011040 Sialidases APT61_RS11530 d30bbfa7e228f4079c91c86bffc11d41 389 Gene3D G3DSA:2.120.10.10 305 386 3.5E-68 T 22-04-2016 IPR011040 Sialidases APT61_RS11530 d30bbfa7e228f4079c91c86bffc11d41 389 PANTHER PTHR33307:SF3 331 382 6.0E-80 T 22-04-2016 APT61_RS11530 d30bbfa7e228f4079c91c86bffc11d41 389 PANTHER PTHR33307:SF3 30 284 6.0E-80 T 22-04-2016 APT61_RS11530 d30bbfa7e228f4079c91c86bffc11d41 389 SUPERFAMILY SSF50939 28 269 8.69E-58 T 22-04-2016 IPR011040 Sialidases APT61_RS11530 d30bbfa7e228f4079c91c86bffc11d41 389 SUPERFAMILY SSF50939 303 385 8.69E-58 T 22-04-2016 IPR011040 Sialidases APT61_RS11530 d30bbfa7e228f4079c91c86bffc11d41 389 Pfam PF13088 BNR repeat-like domain 43 365 1.6E-68 T 22-04-2016 IPR011040 Sialidases APT61_RS04095 2e59d4ae912c6a7870d3d89de8c7a017 198 PIRSF PIRSF006806 6 195 1.2E-35 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APT61_RS04095 2e59d4ae912c6a7870d3d89de8c7a017 198 SUPERFAMILY SSF100950 10 198 6.84E-56 T 22-04-2016 APT61_RS04095 2e59d4ae912c6a7870d3d89de8c7a017 198 PANTHER PTHR23407:SF1 2 198 2.6E-71 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APT61_RS04095 2e59d4ae912c6a7870d3d89de8c7a017 198 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 192 4.5E-52 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APT61_RS04095 2e59d4ae912c6a7870d3d89de8c7a017 198 Gene3D G3DSA:3.40.50.10420 11 197 1.4E-58 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain APT61_RS04095 2e59d4ae912c6a7870d3d89de8c7a017 198 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 12 192 1.4E-43 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase APT61_RS04095 2e59d4ae912c6a7870d3d89de8c7a017 198 PANTHER PTHR23407 2 198 2.6E-71 T 22-04-2016 APT61_RS06355 359cf3476191888a0f3329cdfe798949 253 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 9 249 28.867 T 22-04-2016 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 APT61_RS06355 359cf3476191888a0f3329cdfe798949 253 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 231 1.7E-43 T 22-04-2016 APT61_RS06355 359cf3476191888a0f3329cdfe798949 253 PANTHER PTHR37468 2 249 7.4E-107 T 22-04-2016 APT61_RS18230 914e87c58d556867b7bfc2252de774e2 285 PANTHER PTHR13773 2 279 4.0E-94 T 22-04-2016 APT61_RS18230 914e87c58d556867b7bfc2252de774e2 285 Pfam PF01148 Cytidylyltransferase family 4 278 1.2E-70 T 22-04-2016 APT61_RS18230 914e87c58d556867b7bfc2252de774e2 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 22-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 APT61_RS06230 68eaa4f16e24951bc6ee7e297fbd3c49 118 Pfam PF03960 ArsC family 5 113 6.4E-17 T 22-04-2016 IPR006660 Arsenate reductase-like APT61_RS06230 68eaa4f16e24951bc6ee7e297fbd3c49 118 SUPERFAMILY SSF52833 1 114 4.01E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS06230 68eaa4f16e24951bc6ee7e297fbd3c49 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 113 1.1E-34 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR APT61_RS06230 68eaa4f16e24951bc6ee7e297fbd3c49 118 PANTHER PTHR30041 1 115 4.3E-43 T 22-04-2016 APT61_RS06230 68eaa4f16e24951bc6ee7e297fbd3c49 118 PANTHER PTHR30041:SF3 1 115 4.3E-43 T 22-04-2016 APT61_RS06230 68eaa4f16e24951bc6ee7e297fbd3c49 118 Gene3D G3DSA:3.40.30.10 1 115 2.6E-42 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS20445 6b5806da48ad741749d512d7c620f869 176 PANTHER PTHR10612 1 175 2.0E-47 T 22-04-2016 APT61_RS20445 6b5806da48ad741749d512d7c620f869 176 SUPERFAMILY SSF50814 14 174 3.43E-46 T 22-04-2016 IPR011038 Calycin-like APT61_RS20445 6b5806da48ad741749d512d7c620f869 176 Gene3D G3DSA:2.40.128.20 2 176 3.2E-54 T 22-04-2016 IPR012674 Calycin APT61_RS20445 6b5806da48ad741749d512d7c620f869 176 PRINTS PR01171 Bacterial lipocalin signature 121 129 4.7E-40 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APT61_RS20445 6b5806da48ad741749d512d7c620f869 176 PRINTS PR01171 Bacterial lipocalin signature 51 67 4.7E-40 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APT61_RS20445 6b5806da48ad741749d512d7c620f869 176 PRINTS PR01171 Bacterial lipocalin signature 136 147 4.7E-40 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APT61_RS20445 6b5806da48ad741749d512d7c620f869 176 PRINTS PR01171 Bacterial lipocalin signature 104 118 4.7E-40 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APT61_RS20445 6b5806da48ad741749d512d7c620f869 176 PRINTS PR01171 Bacterial lipocalin signature 34 48 4.7E-40 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APT61_RS20445 6b5806da48ad741749d512d7c620f869 176 PRINTS PR01171 Bacterial lipocalin signature 163 173 4.7E-40 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APT61_RS20445 6b5806da48ad741749d512d7c620f869 176 PRINTS PR01171 Bacterial lipocalin signature 70 79 4.7E-40 T 22-04-2016 IPR002446 Lipocalin, bacterial GO:0005215 APT61_RS20445 6b5806da48ad741749d512d7c620f869 176 PIRSF PIRSF036893 1 176 7.5E-48 T 22-04-2016 IPR022271 Lipocalin, ApoD type APT61_RS20445 6b5806da48ad741749d512d7c620f869 176 Pfam PF08212 Lipocalin-like domain 35 174 7.6E-46 T 22-04-2016 IPR000566 Lipocalin/cytosolic fatty-acid binding domain APT61_RS21545 f605fd405b950a0d462777fe3771f70b 156 SUPERFAMILY SSF75217 1 152 7.19E-46 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases APT61_RS21545 f605fd405b950a0d462777fe3771f70b 156 PANTHER PTHR12029 1 156 3.8E-80 T 22-04-2016 APT61_RS21545 f605fd405b950a0d462777fe3771f70b 156 PIRSF PIRSF029256 1 154 1.2E-70 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APT61_RS21545 f605fd405b950a0d462777fe3771f70b 156 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 3.1E-73 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APT61_RS21545 f605fd405b950a0d462777fe3771f70b 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.331 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 APT61_RS21545 f605fd405b950a0d462777fe3771f70b 156 Gene3D G3DSA:3.40.1280.10 1 153 4.9E-70 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal APT61_RS21545 f605fd405b950a0d462777fe3771f70b 156 PANTHER PTHR12029:SF31 1 156 3.8E-80 T 22-04-2016 APT61_RS21545 f605fd405b950a0d462777fe3771f70b 156 Pfam PF00588 SpoU rRNA Methylase family 2 142 3.0E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 APT61_RS18975 80bbd8431ebbcb2ef2680c47ed6d0e69 312 SMART SM00904 183 307 1.5E-61 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APT61_RS18975 80bbd8431ebbcb2ef2680c47ed6d0e69 312 Pfam PF06574 FAD synthetase 12 167 1.2E-57 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APT61_RS18975 80bbd8431ebbcb2ef2680c47ed6d0e69 312 PANTHER PTHR22749 1 308 5.3E-144 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 APT61_RS18975 80bbd8431ebbcb2ef2680c47ed6d0e69 312 SUPERFAMILY SSF82114 174 307 4.8E-43 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APT61_RS18975 80bbd8431ebbcb2ef2680c47ed6d0e69 312 Gene3D G3DSA:2.40.30.30 180 307 1.5E-38 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 APT61_RS18975 80bbd8431ebbcb2ef2680c47ed6d0e69 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 1.7E-115 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APT61_RS18975 80bbd8431ebbcb2ef2680c47ed6d0e69 312 Pfam PF01687 Riboflavin kinase 184 306 1.3E-36 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 APT61_RS18975 80bbd8431ebbcb2ef2680c47ed6d0e69 312 Gene3D G3DSA:3.40.50.620 1 179 6.7E-69 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS18975 80bbd8431ebbcb2ef2680c47ed6d0e69 312 PANTHER PTHR22749:SF0 1 308 5.3E-144 T 22-04-2016 APT61_RS18975 80bbd8431ebbcb2ef2680c47ed6d0e69 312 PIRSF PIRSF004491 1 311 1.0E-102 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 APT61_RS18975 80bbd8431ebbcb2ef2680c47ed6d0e69 312 SUPERFAMILY SSF52374 15 175 1.15E-34 T 22-04-2016 APT61_RS08825 a99546146fbd50d4a417b3fa94c08cf0 192 PANTHER PTHR12992 8 192 6.1E-57 T 22-04-2016 APT61_RS08825 a99546146fbd50d4a417b3fa94c08cf0 192 Gene3D G3DSA:3.90.79.10 29 185 1.5E-39 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS08825 a99546146fbd50d4a417b3fa94c08cf0 192 SUPERFAMILY SSF55811 9 181 8.12E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS08825 a99546146fbd50d4a417b3fa94c08cf0 192 Pfam PF00293 NUDIX domain 30 142 3.2E-14 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APT61_RS08825 a99546146fbd50d4a417b3fa94c08cf0 192 ProSitePatterns PS01293 Nudix CoA signature. 47 67 - T 22-04-2016 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 APT61_RS12000 a4b231818430f036882b99f21221acdc 299 PANTHER PTHR30177 23 299 1.9E-111 T 22-04-2016 APT61_RS12000 a4b231818430f036882b99f21221acdc 299 Gene3D G3DSA:3.40.190.120 125 237 7.3E-34 T 22-04-2016 APT61_RS12000 a4b231818430f036882b99f21221acdc 299 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 294 5.7E-65 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 APT61_RS12000 a4b231818430f036882b99f21221acdc 299 Gene3D G3DSA:3.40.190.10 243 299 8.7E-53 T 22-04-2016 APT61_RS12000 a4b231818430f036882b99f21221acdc 299 Gene3D G3DSA:3.40.190.10 23 124 8.7E-53 T 22-04-2016 APT61_RS12000 a4b231818430f036882b99f21221acdc 299 PANTHER PTHR30177:SF9 23 299 1.9E-111 T 22-04-2016 APT61_RS12000 a4b231818430f036882b99f21221acdc 299 SUPERFAMILY SSF53850 24 298 1.24E-62 T 22-04-2016 APT61_RS06445 505ffd8b12e6620c96f5f2f195f02c44 395 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 393 2.8E-58 T 22-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 APT61_RS06445 505ffd8b12e6620c96f5f2f195f02c44 395 Pfam PF07670 Nucleoside recognition 92 189 1.1E-7 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APT61_RS06445 505ffd8b12e6620c96f5f2f195f02c44 395 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 393 1.4E-140 T 22-04-2016 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 APT61_RS06445 505ffd8b12e6620c96f5f2f195f02c44 395 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 3.5E-21 T 22-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 APT61_RS06445 505ffd8b12e6620c96f5f2f195f02c44 395 PANTHER PTHR10590 1 395 9.1E-254 T 22-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 APT61_RS06445 505ffd8b12e6620c96f5f2f195f02c44 395 PANTHER PTHR10590:SF13 1 395 9.1E-254 T 22-04-2016 APT61_RS11565 09a41ab3b694f51ec4f00a09d8f99967 221 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 11 213 5.8E-34 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APT61_RS11565 09a41ab3b694f51ec4f00a09d8f99967 221 PANTHER PTHR33508 1 221 3.0E-125 T 22-04-2016 APT61_RS11565 09a41ab3b694f51ec4f00a09d8f99967 221 PANTHER PTHR33508:SF2 1 221 3.0E-125 T 22-04-2016 APT61_RS11565 09a41ab3b694f51ec4f00a09d8f99967 221 Pfam PF01914 MarC family integral membrane protein 7 217 7.0E-64 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APT61_RS17720 ac103b653d31f580ee4faa3b8333c07b 520 Pfam PF02264 LamB porin 91 520 6.4E-103 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS17720 ac103b653d31f580ee4faa3b8333c07b 520 SUPERFAMILY SSF56935 88 520 1.28E-101 T 22-04-2016 APT61_RS17720 ac103b653d31f580ee4faa3b8333c07b 520 Gene3D G3DSA:2.40.170.10 87 520 4.8E-126 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS17720 ac103b653d31f580ee4faa3b8333c07b 520 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 95 515 2.0E-108 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS17720 ac103b653d31f580ee4faa3b8333c07b 520 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 53 3.4E-15 T 22-04-2016 IPR021570 LamB-type porin N-terminal domain APT61_RS17720 ac103b653d31f580ee4faa3b8333c07b 520 PANTHER PTHR38762 127 520 8.8E-19 T 22-04-2016 APT61_RS15840 c309763a75b7b744f5ba3410a84bb3ba 239 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 11 181 4.5E-62 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APT61_RS15840 c309763a75b7b744f5ba3410a84bb3ba 239 SUPERFAMILY SSF52540 9 214 3.35E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15840 c309763a75b7b744f5ba3410a84bb3ba 239 PIRSF PIRSF006755 6 233 4.3E-80 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APT61_RS15840 c309763a75b7b744f5ba3410a84bb3ba 239 Pfam PF13500 AAA domain 9 212 2.1E-38 T 22-04-2016 APT61_RS15840 c309763a75b7b744f5ba3410a84bb3ba 239 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 7 217 29.366 T 22-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 APT61_RS15840 c309763a75b7b744f5ba3410a84bb3ba 239 PANTHER PTHR21343 7 230 2.6E-112 T 22-04-2016 APT61_RS15840 c309763a75b7b744f5ba3410a84bb3ba 239 Gene3D G3DSA:3.40.50.300 9 218 1.6E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15840 c309763a75b7b744f5ba3410a84bb3ba 239 PANTHER PTHR21343:SF13 7 230 2.6E-112 T 22-04-2016 APT61_RS21030 540f128dc7966eb47f2934e3ffbf22c6 314 Pfam PF01758 Sodium Bile acid symporter family 36 213 4.0E-40 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 APT61_RS21030 540f128dc7966eb47f2934e3ffbf22c6 314 PANTHER PTHR10361 1 297 3.4E-90 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 APT61_RS08335 65c67033129f2a309c6eb7921d57be4c 212 Gene3D G3DSA:3.40.1400.10 1 210 2.8E-95 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APT61_RS08335 65c67033129f2a309c6eb7921d57be4c 212 Pfam PF02502 Ribose/Galactose Isomerase 3 144 2.3E-29 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APT61_RS08335 65c67033129f2a309c6eb7921d57be4c 212 SUPERFAMILY SSF89623 1 161 4.71E-36 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APT61_RS08335 65c67033129f2a309c6eb7921d57be4c 212 PANTHER PTHR30345:SF0 1 210 1.9E-37 T 22-04-2016 APT61_RS08335 65c67033129f2a309c6eb7921d57be4c 212 PANTHER PTHR30345 1 210 1.9E-37 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 APT61_RS08335 65c67033129f2a309c6eb7921d57be4c 212 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 6.8E-23 T 22-04-2016 IPR022133 Ribose-5-phosphate isomerase, C-terminal APT61_RS13425 f21492310c75be8cd902730b6b131692 248 Pfam PF06629 MltA-interacting protein MipA 28 248 8.1E-53 T 22-04-2016 IPR010583 MltA-interacting MipA APT61_RS13425 f21492310c75be8cd902730b6b131692 248 PANTHER PTHR38776 4 248 3.5E-87 T 22-04-2016 APT61_RS13425 f21492310c75be8cd902730b6b131692 248 SUPERFAMILY SSF56925 132 248 5.89E-5 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS13425 f21492310c75be8cd902730b6b131692 248 SUPERFAMILY SSF56925 20 95 5.89E-5 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS13425 f21492310c75be8cd902730b6b131692 248 Gene3D G3DSA:2.40.160.20 11 95 1.3E-5 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS13425 f21492310c75be8cd902730b6b131692 248 Gene3D G3DSA:2.40.160.20 130 248 1.3E-5 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS21790 6d8f19fe787e64120a3ddfcfeac70b13 359 PANTHER PTHR39639 1 189 1.0E-21 T 22-04-2016 APT61_RS21790 6d8f19fe787e64120a3ddfcfeac70b13 359 Pfam PF03235 Protein of unknown function DUF262 39 113 7.5E-17 T 22-04-2016 IPR004919 Domain of unknown function DUF262 APT61_RS12580 127b714c722bfa5cd26062e460dc7e5a 502 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 18 486 2.9E-140 T 22-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 APT61_RS12580 127b714c722bfa5cd26062e460dc7e5a 502 PANTHER PTHR11654:SF99 239 497 2.1E-248 T 22-04-2016 APT61_RS12580 127b714c722bfa5cd26062e460dc7e5a 502 PANTHER PTHR11654:SF99 5 221 2.1E-248 T 22-04-2016 APT61_RS12580 127b714c722bfa5cd26062e460dc7e5a 502 SUPERFAMILY SSF103473 15 213 2.49E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS12580 127b714c722bfa5cd26062e460dc7e5a 502 SUPERFAMILY SSF103473 258 488 2.49E-28 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS12580 127b714c722bfa5cd26062e460dc7e5a 502 Gene3D G3DSA:1.20.1250.20 22 202 2.8E-20 T 22-04-2016 APT61_RS12580 127b714c722bfa5cd26062e460dc7e5a 502 Gene3D G3DSA:1.20.1250.20 276 486 1.3E-9 T 22-04-2016 APT61_RS12580 127b714c722bfa5cd26062e460dc7e5a 502 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 153 165 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS12580 127b714c722bfa5cd26062e460dc7e5a 502 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 78 102 - T 22-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS12580 127b714c722bfa5cd26062e460dc7e5a 502 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 490 50.123 T 22-04-2016 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0015197|GO:0016020 APT61_RS12580 127b714c722bfa5cd26062e460dc7e5a 502 Pfam PF00854 POT family 90 446 1.3E-88 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS12580 127b714c722bfa5cd26062e460dc7e5a 502 PANTHER PTHR11654 239 497 2.1E-248 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS12580 127b714c722bfa5cd26062e460dc7e5a 502 PANTHER PTHR11654 5 221 2.1E-248 T 22-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS18745 e98aa18d5e8bdcb9b55a32f7115fd6bc 399 Pfam PF07690 Major Facilitator Superfamily 10 352 7.1E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS18745 e98aa18d5e8bdcb9b55a32f7115fd6bc 399 PANTHER PTHR23502 4 382 3.1E-106 T 22-04-2016 APT61_RS18745 e98aa18d5e8bdcb9b55a32f7115fd6bc 399 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 3 382 3.4E-70 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 APT61_RS18745 e98aa18d5e8bdcb9b55a32f7115fd6bc 399 PRINTS PR01035 Tetracycline resistance protein signature 129 151 1.3E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS18745 e98aa18d5e8bdcb9b55a32f7115fd6bc 399 PRINTS PR01035 Tetracycline resistance protein signature 44 63 1.3E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS18745 e98aa18d5e8bdcb9b55a32f7115fd6bc 399 PRINTS PR01035 Tetracycline resistance protein signature 14 30 1.3E-5 T 22-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 APT61_RS18745 e98aa18d5e8bdcb9b55a32f7115fd6bc 399 PANTHER PTHR23502:SF19 4 382 3.1E-106 T 22-04-2016 APT61_RS18745 e98aa18d5e8bdcb9b55a32f7115fd6bc 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 74 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS18745 e98aa18d5e8bdcb9b55a32f7115fd6bc 399 SUPERFAMILY SSF103473 5 383 1.83E-54 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS18745 e98aa18d5e8bdcb9b55a32f7115fd6bc 399 Gene3D G3DSA:1.20.1250.20 202 383 4.1E-8 T 22-04-2016 APT61_RS18745 e98aa18d5e8bdcb9b55a32f7115fd6bc 399 Gene3D G3DSA:1.20.1250.20 5 183 1.8E-28 T 22-04-2016 APT61_RS08810 40c2674a2177857aa78a4ff34397e5e0 519 SUPERFAMILY SSF54631 288 422 4.04E-22 T 22-04-2016 APT61_RS08810 40c2674a2177857aa78a4ff34397e5e0 519 Gene3D G3DSA:3.30.465.10 414 510 8.8E-20 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 APT61_RS08810 40c2674a2177857aa78a4ff34397e5e0 519 PANTHER PTHR22777:SF15 1 519 0.0 T 22-04-2016 APT61_RS08810 40c2674a2177857aa78a4ff34397e5e0 519 PANTHER PTHR22777 1 519 0.0 T 22-04-2016 APT61_RS08810 40c2674a2177857aa78a4ff34397e5e0 519 SMART SM01091 431 512 3.7E-17 T 22-04-2016 IPR005170 Transporter-associated domain APT61_RS08810 40c2674a2177857aa78a4ff34397e5e0 519 SUPERFAMILY SSF56176 433 518 6.27E-16 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 APT61_RS08810 40c2674a2177857aa78a4ff34397e5e0 519 Pfam PF03741 Integral membrane protein TerC family 14 203 4.1E-49 T 22-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 APT61_RS08810 40c2674a2177857aa78a4ff34397e5e0 519 Gene3D G3DSA:3.10.580.10 286 413 3.2E-11 T 22-04-2016 APT61_RS08810 40c2674a2177857aa78a4ff34397e5e0 519 Pfam PF03471 Transporter associated domain 433 510 1.6E-14 T 22-04-2016 IPR005170 Transporter-associated domain APT61_RS00455 5b0bcea41c6edc8f98f9656006ba876a 224 Gene3D G3DSA:2.40.33.20 3 223 1.7E-83 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like APT61_RS00455 5b0bcea41c6edc8f98f9656006ba876a 224 PANTHER PTHR30212:SF2 10 223 5.6E-74 T 22-04-2016 APT61_RS00455 5b0bcea41c6edc8f98f9656006ba876a 224 SUPERFAMILY SSF50800 4 223 4.66E-74 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain APT61_RS00455 5b0bcea41c6edc8f98f9656006ba876a 224 Pfam PF03473 MOSC domain 47 158 6.0E-20 T 22-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 APT61_RS00455 5b0bcea41c6edc8f98f9656006ba876a 224 PANTHER PTHR30212 10 223 5.6E-74 T 22-04-2016 APT61_RS00455 5b0bcea41c6edc8f98f9656006ba876a 224 Pfam PF03475 3-alpha domain 169 209 2.5E-13 T 22-04-2016 IPR005163 3-alpha domain APT61_RS12005 233f5b6d31d1e4342782be865f46eddb 215 SUPERFAMILY SSF161098 11 204 1.16E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS12005 233f5b6d31d1e4342782be865f46eddb 215 PANTHER PTHR30177:SF4 1 215 7.2E-88 T 22-04-2016 APT61_RS12005 233f5b6d31d1e4342782be865f46eddb 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 205 6.6E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS12005 233f5b6d31d1e4342782be865f46eddb 215 PANTHER PTHR30177 1 215 7.2E-88 T 22-04-2016 APT61_RS12005 233f5b6d31d1e4342782be865f46eddb 215 Gene3D G3DSA:1.10.3720.10 9 203 5.0E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS21910 d03b1d182db6f1fac4920b9a73a2c9ac 301 PANTHER PTHR22911 1 300 5.0E-65 T 22-04-2016 APT61_RS21910 d03b1d182db6f1fac4920b9a73a2c9ac 301 PANTHER PTHR22911:SF23 1 300 5.0E-65 T 22-04-2016 APT61_RS21910 d03b1d182db6f1fac4920b9a73a2c9ac 301 SUPERFAMILY SSF103481 43 148 3.14E-7 T 22-04-2016 APT61_RS21910 d03b1d182db6f1fac4920b9a73a2c9ac 301 SUPERFAMILY SSF103481 191 296 8.24E-14 T 22-04-2016 APT61_RS21910 d03b1d182db6f1fac4920b9a73a2c9ac 301 Pfam PF00892 EamA-like transporter family 158 290 5.1E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS21910 d03b1d182db6f1fac4920b9a73a2c9ac 301 Pfam PF00892 EamA-like transporter family 6 145 5.5E-20 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS14795 df965bc5dc31671c1da40a7ae867179a 545 PANTHER PTHR30462:SF2 1 545 0.0 T 22-04-2016 APT61_RS14795 df965bc5dc31671c1da40a7ae867179a 545 PANTHER PTHR30462 1 545 0.0 T 22-04-2016 APT61_RS14795 df965bc5dc31671c1da40a7ae867179a 545 Pfam PF02470 MlaD protein 158 222 3.9E-7 T 22-04-2016 IPR003399 Mce/MlaD APT61_RS14795 df965bc5dc31671c1da40a7ae867179a 545 Pfam PF02470 MlaD protein 43 133 8.3E-9 T 22-04-2016 IPR003399 Mce/MlaD APT61_RS14795 df965bc5dc31671c1da40a7ae867179a 545 Pfam PF02470 MlaD protein 285 388 2.6E-13 T 22-04-2016 IPR003399 Mce/MlaD APT61_RS08945 9f654a9b9e968f0e6c2a48d4d4063349 243 Pfam PF07317 Flagellar regulator YcgR 8 109 2.4E-26 T 22-04-2016 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal APT61_RS08945 9f654a9b9e968f0e6c2a48d4d4063349 243 Gene3D G3DSA:2.40.10.220 113 242 2.9E-37 T 22-04-2016 APT61_RS08945 9f654a9b9e968f0e6c2a48d4d4063349 243 Pfam PF07238 PilZ domain 112 229 5.3E-10 T 22-04-2016 IPR009875 PilZ domain GO:0035438 APT61_RS08945 9f654a9b9e968f0e6c2a48d4d4063349 243 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 3 239 28.885 T 22-04-2016 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 APT61_RS08945 9f654a9b9e968f0e6c2a48d4d4063349 243 Gene3D G3DSA:2.30.110.10 11 110 1.0E-8 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS04560 0093327b21ce3b4da38c69a2eb513c44 280 Gene3D G3DSA:3.30.1130.10 20 137 8.1E-44 T 22-04-2016 APT61_RS04560 0093327b21ce3b4da38c69a2eb513c44 280 PANTHER PTHR34354:SF1 1 280 5.5E-111 T 22-04-2016 APT61_RS04560 0093327b21ce3b4da38c69a2eb513c44 280 SUPERFAMILY SSF55620 184 267 3.04E-10 T 22-04-2016 APT61_RS04560 0093327b21ce3b4da38c69a2eb513c44 280 PIRSF PIRSF004750 5 280 1.1E-128 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS04560 0093327b21ce3b4da38c69a2eb513c44 280 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 280 166.966 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS04560 0093327b21ce3b4da38c69a2eb513c44 280 PANTHER PTHR34354 1 280 5.5E-111 T 22-04-2016 APT61_RS04560 0093327b21ce3b4da38c69a2eb513c44 280 Gene3D G3DSA:3.30.1130.10 144 279 6.0E-57 T 22-04-2016 APT61_RS04560 0093327b21ce3b4da38c69a2eb513c44 280 Pfam PF14489 QueF-like protein 194 268 2.4E-27 T 22-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS04560 0093327b21ce3b4da38c69a2eb513c44 280 TIGRFAM TIGR03138 QueF: queuine synthase 10 280 5.1E-129 T 22-04-2016 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS04560 0093327b21ce3b4da38c69a2eb513c44 280 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 20 130 2.4E-48 T 22-04-2016 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 APT61_RS18920 e824a84e731590633d63a9401a8f6da5 77 PANTHER PTHR37011 3 77 1.3E-32 T 22-04-2016 APT61_RS18920 e824a84e731590633d63a9401a8f6da5 77 Pfam PF06004 Bacterial protein of unknown function (DUF903) 26 74 7.5E-19 T 22-04-2016 IPR010305 Protein of unknown function DUF903 APT61_RS18920 e824a84e731590633d63a9401a8f6da5 77 PANTHER PTHR37011:SF2 3 77 1.3E-32 T 22-04-2016 APT61_RS18920 e824a84e731590633d63a9401a8f6da5 77 Gene3D G3DSA:2.30.30.100 21 77 1.4E-28 T 22-04-2016 APT61_RS18920 e824a84e731590633d63a9401a8f6da5 77 SUPERFAMILY SSF50182 23 75 7.63E-15 T 22-04-2016 IPR010920 LSM domain APT61_RS18740 71f5ec2c947a198d5f07efca1e9aa133 328 PANTHER PTHR11732 256 328 2.1E-78 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS18740 71f5ec2c947a198d5f07efca1e9aa133 328 PANTHER PTHR11732 1 238 2.1E-78 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS18740 71f5ec2c947a198d5f07efca1e9aa133 328 Gene3D G3DSA:3.20.20.100 1 319 3.0E-73 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS18740 71f5ec2c947a198d5f07efca1e9aa133 328 SUPERFAMILY SSF51430 1 324 1.11E-74 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS18740 71f5ec2c947a198d5f07efca1e9aa133 328 Pfam PF00248 Aldo/keto reductase family 15 316 1.5E-61 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS18740 71f5ec2c947a198d5f07efca1e9aa133 328 PRINTS PR00069 Aldo-keto reductase signature 138 155 1.1E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS18740 71f5ec2c947a198d5f07efca1e9aa133 328 PRINTS PR00069 Aldo-keto reductase signature 42 66 1.1E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS18740 71f5ec2c947a198d5f07efca1e9aa133 328 PRINTS PR00069 Aldo-keto reductase signature 106 124 1.1E-5 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS10055 96f90e31be9f1891ecf189806038dceb 261 Gene3D G3DSA:1.10.12.10 203 261 1.2E-20 T 22-04-2016 IPR014748 Crontonase, C-terminal APT61_RS10055 96f90e31be9f1891ecf189806038dceb 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 260 1.4E-62 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APT61_RS10055 96f90e31be9f1891ecf189806038dceb 261 TIGRFAM TIGR02280 PaaB1: phenylacetate degradation probable enoyl-CoA hydratase PaaB 4 261 8.7E-142 T 22-04-2016 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB GO:0010124 KEGG: 00360+5.3.3.18|UniPathway: UPA00930 APT61_RS10055 96f90e31be9f1891ecf189806038dceb 261 PANTHER PTHR11941 1 258 3.1E-119 T 22-04-2016 APT61_RS10055 96f90e31be9f1891ecf189806038dceb 261 SUPERFAMILY SSF52096 1 260 1.1E-85 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS10055 96f90e31be9f1891ecf189806038dceb 261 Gene3D G3DSA:3.90.226.10 2 201 1.5E-67 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS10055 96f90e31be9f1891ecf189806038dceb 261 PANTHER PTHR11941:SF76 1 258 3.1E-119 T 22-04-2016 APT61_RS10255 c1d354337ca5ca3406480f23644e0dff 225 Gene3D G3DSA:2.50.20.10 147 211 7.8E-6 T 22-04-2016 APT61_RS10255 c1d354337ca5ca3406480f23644e0dff 225 Pfam PF03888 MucB/RseB N-terminal domain 126 219 1.2E-6 T 22-04-2016 IPR033434 MucB/RseB, N-terminal APT61_RS03225 d619bfb52058d0f90e5022e79a4fcfda 339 PANTHER PTHR30349 80 330 1.9E-36 T 22-04-2016 APT61_RS03225 d619bfb52058d0f90e5022e79a4fcfda 339 Gene3D G3DSA:1.10.443.10 173 330 7.6E-43 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS03225 d619bfb52058d0f90e5022e79a4fcfda 339 Pfam PF00589 Phage integrase family 173 320 9.0E-23 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 APT61_RS03225 d619bfb52058d0f90e5022e79a4fcfda 339 SUPERFAMILY SSF56349 61 329 1.97E-45 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 APT61_RS03225 d619bfb52058d0f90e5022e79a4fcfda 339 PANTHER PTHR30349:SF20 80 330 1.9E-36 T 22-04-2016 APT61_RS15825 e2d618772112a73baf782837cf816f83 302 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 261 1.8E-97 T 22-04-2016 IPR010119 Gluconeogenesis factor APT61_RS15825 e2d618772112a73baf782837cf816f83 302 Gene3D G3DSA:3.40.50.10680 82 299 4.3E-49 T 22-04-2016 APT61_RS15825 e2d618772112a73baf782837cf816f83 302 SUPERFAMILY SSF142338 11 294 1.83E-83 T 22-04-2016 APT61_RS15825 e2d618772112a73baf782837cf816f83 302 Pfam PF01933 Uncharacterised protein family UPF0052 12 287 4.1E-75 T 22-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 APT61_RS15825 e2d618772112a73baf782837cf816f83 302 Hamap MF_00973 Gluconeogenesis factor. 8 300 31.766 T 22-04-2016 IPR010119 Gluconeogenesis factor APT61_RS15825 e2d618772112a73baf782837cf816f83 302 PANTHER PTHR30135 1 302 6.0E-108 T 22-04-2016 APT61_RS15375 c87f48cd93578c8de53eef4122f0badc 492 Pfam PF01593 Flavin containing amine oxidoreductase 12 486 2.2E-39 T 22-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 APT61_RS15375 c87f48cd93578c8de53eef4122f0badc 492 SUPERFAMILY SSF51905 3 317 3.02E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS15375 c87f48cd93578c8de53eef4122f0badc 492 SUPERFAMILY SSF51905 448 490 3.02E-71 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS15375 c87f48cd93578c8de53eef4122f0badc 492 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 4 490 7.8E-224 T 22-04-2016 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 APT61_RS15375 c87f48cd93578c8de53eef4122f0badc 492 PANTHER PTHR10668:SF4 5 483 2.5E-107 T 22-04-2016 APT61_RS15375 c87f48cd93578c8de53eef4122f0badc 492 PANTHER PTHR10668 5 483 2.5E-107 T 22-04-2016 APT61_RS15375 c87f48cd93578c8de53eef4122f0badc 492 Gene3D G3DSA:3.50.50.60 199 354 2.7E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS15375 c87f48cd93578c8de53eef4122f0badc 492 Gene3D G3DSA:3.50.50.60 3 94 2.7E-32 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 APT61_RS15375 c87f48cd93578c8de53eef4122f0badc 492 ProSitePatterns PS00982 Bacterial-type phytoene dehydrogenase signature. 458 478 - T 22-04-2016 IPR008150 Phytoene dehydrogenase, bacterial-type, conserved site APT61_RS15860 5a04d273cae54fc16efd9c76dfad4f9f 435 SUPERFAMILY SSF53383 7 428 6.05E-137 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS15860 5a04d273cae54fc16efd9c76dfad4f9f 435 Gene3D G3DSA:3.40.640.10 68 334 5.3E-93 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS15860 5a04d273cae54fc16efd9c76dfad4f9f 435 PANTHER PTHR11986 10 435 1.7E-217 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS15860 5a04d273cae54fc16efd9c76dfad4f9f 435 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 19 427 3.3E-184 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 APT61_RS15860 5a04d273cae54fc16efd9c76dfad4f9f 435 PANTHER PTHR11986:SF8 10 435 1.7E-217 T 22-04-2016 APT61_RS15860 5a04d273cae54fc16efd9c76dfad4f9f 435 Pfam PF00202 Aminotransferase class-III 32 426 4.3E-130 T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS15860 5a04d273cae54fc16efd9c76dfad4f9f 435 Gene3D G3DSA:3.90.1150.10 7 67 7.7E-62 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS15860 5a04d273cae54fc16efd9c76dfad4f9f 435 Gene3D G3DSA:3.90.1150.10 338 429 7.7E-62 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS15860 5a04d273cae54fc16efd9c76dfad4f9f 435 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 285 - T 22-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 APT61_RS15860 5a04d273cae54fc16efd9c76dfad4f9f 435 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 7 430 51.418 T 22-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 APT61_RS04200 895e2a5de942ec4e5d04708c92ad8812 237 PANTHER PTHR35272 1 237 1.3E-112 T 22-04-2016 APT61_RS04200 895e2a5de942ec4e5d04708c92ad8812 237 SUPERFAMILY SSF54423 23 81 4.45E-18 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal APT61_RS04200 895e2a5de942ec4e5d04708c92ad8812 237 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 76 1.9E-16 T 22-04-2016 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal APT61_RS04200 895e2a5de942ec4e5d04708c92ad8812 237 Gene3D G3DSA:3.40.30.10 99 233 7.6E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS04200 895e2a5de942ec4e5d04708c92ad8812 237 Gene3D G3DSA:3.10.450.70 22 82 7.4E-28 T 22-04-2016 IPR009094 Disulphide bond isomerase, DsbC, N-terminal APT61_RS04200 895e2a5de942ec4e5d04708c92ad8812 237 PANTHER PTHR35272:SF3 1 237 1.3E-112 T 22-04-2016 APT61_RS04200 895e2a5de942ec4e5d04708c92ad8812 237 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 APT61_RS04200 895e2a5de942ec4e5d04708c92ad8812 237 SUPERFAMILY SSF52833 86 233 6.73E-43 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS04200 895e2a5de942ec4e5d04708c92ad8812 237 Pfam PF13098 Thioredoxin-like domain 104 227 8.5E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS03060 7c839a6b6242afaa45cc7cf62a23f3a1 432 PANTHER PTHR11662:SF285 1 423 7.8E-270 T 22-04-2016 APT61_RS03060 7c839a6b6242afaa45cc7cf62a23f3a1 432 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 17 411 6.1E-121 T 22-04-2016 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 APT61_RS03060 7c839a6b6242afaa45cc7cf62a23f3a1 432 SUPERFAMILY SSF103473 3 415 8.63E-78 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS03060 7c839a6b6242afaa45cc7cf62a23f3a1 432 Gene3D G3DSA:1.20.1250.20 7 199 9.7E-44 T 22-04-2016 APT61_RS03060 7c839a6b6242afaa45cc7cf62a23f3a1 432 Pfam PF07690 Major Facilitator Superfamily 16 287 1.8E-46 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS03060 7c839a6b6242afaa45cc7cf62a23f3a1 432 PANTHER PTHR11662 1 423 7.8E-270 T 22-04-2016 APT61_RS03060 7c839a6b6242afaa45cc7cf62a23f3a1 432 Gene3D G3DSA:1.20.1250.20 223 419 5.4E-17 T 22-04-2016 APT61_RS19495 46da4680f0f0a8be16f9bffc265c26d5 67 PANTHER PTHR38453:SF2 1 67 7.2E-56 T 22-04-2016 APT61_RS19495 46da4680f0f0a8be16f9bffc265c26d5 67 PANTHER PTHR38453 1 67 7.2E-56 T 22-04-2016 APT61_RS19495 46da4680f0f0a8be16f9bffc265c26d5 67 Pfam PF04328 Protein of unknown function (DUF466) 6 67 1.9E-27 T 22-04-2016 IPR007423 Protein of unknown function DUF466 APT61_RS21975 b825485984bfe467480be6c7a9c260b2 29 TIGRFAM TIGR04459 TisB_tox: type I toxin-antitoxin system toxin TisB 1 29 1.9E-17 T 22-04-2016 IPR025211 Toxin TisB, type I toxin-antitoxin system GO:0005253|GO:0005887|GO:0009432|GO:0022611 APT61_RS21975 b825485984bfe467480be6c7a9c260b2 29 Pfam PF13939 Toxin TisB, type I toxin-antitoxin system 1 27 2.1E-16 T 22-04-2016 IPR025211 Toxin TisB, type I toxin-antitoxin system GO:0005253|GO:0005887|GO:0009432|GO:0022611 APT61_RS21035 e60d81c365e8e97d796c95ee7cbde0ba 90 Pfam PF11656 YjbD family (DUF3811) 4 90 1.6E-37 T 22-04-2016 IPR020317 Uncharacterised protein family YjbD APT61_RS21035 e60d81c365e8e97d796c95ee7cbde0ba 90 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 4 90 6.0E-36 T 22-04-2016 IPR020317 Uncharacterised protein family YjbD APT61_RS08300 0566e7e6ae8294cff9fe56a75c959271 373 PANTHER PTHR30483:SF20 18 373 1.9E-119 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS08300 0566e7e6ae8294cff9fe56a75c959271 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 69 87 5.5E-28 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS08300 0566e7e6ae8294cff9fe56a75c959271 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 28 44 5.5E-28 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS08300 0566e7e6ae8294cff9fe56a75c959271 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 333 348 5.5E-28 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS08300 0566e7e6ae8294cff9fe56a75c959271 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 282 295 5.5E-28 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS08300 0566e7e6ae8294cff9fe56a75c959271 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 50 66 5.5E-28 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 APT61_RS08300 0566e7e6ae8294cff9fe56a75c959271 373 Pfam PF13458 Periplasmic binding protein 28 367 2.3E-66 T 22-04-2016 IPR028081 Leucine-binding protein domain APT61_RS08300 0566e7e6ae8294cff9fe56a75c959271 373 SUPERFAMILY SSF53822 27 371 1.6E-93 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS08300 0566e7e6ae8294cff9fe56a75c959271 373 Gene3D G3DSA:3.40.50.2300 27 227 7.3E-71 T 22-04-2016 APT61_RS08300 0566e7e6ae8294cff9fe56a75c959271 373 PANTHER PTHR30483 18 373 1.9E-119 T 22-04-2016 APT61_RS04180 f9387aa5ccd4b0beba671a7440ff5cc1 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 74 8.1E-25 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase APT61_RS04180 f9387aa5ccd4b0beba671a7440ff5cc1 88 SUPERFAMILY SSF109910 1 78 5.62E-26 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase APT61_RS04180 f9387aa5ccd4b0beba671a7440ff5cc1 88 Gene3D G3DSA:1.10.150.250 2 85 8.7E-31 T 22-04-2016 IPR005631 Flavinator of succinate dehydrogenase APT61_RS04180 f9387aa5ccd4b0beba671a7440ff5cc1 88 PANTHER PTHR39585:SF1 1 88 6.4E-38 T 22-04-2016 APT61_RS04180 f9387aa5ccd4b0beba671a7440ff5cc1 88 PANTHER PTHR39585 1 88 6.4E-38 T 22-04-2016 APT61_RS03820 a6ccfe93e14c38ca475cb17c7e31ec16 529 PANTHER PTHR30290 1 527 2.7E-130 T 22-04-2016 APT61_RS03820 a6ccfe93e14c38ca475cb17c7e31ec16 529 Gene3D G3DSA:3.10.105.10 298 495 1.6E-45 T 22-04-2016 APT61_RS03820 a6ccfe93e14c38ca475cb17c7e31ec16 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 86 444 1.3E-85 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain APT61_RS03820 a6ccfe93e14c38ca475cb17c7e31ec16 529 PIRSF PIRSF002741 1 528 2.3E-115 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 APT61_RS03820 a6ccfe93e14c38ca475cb17c7e31ec16 529 PANTHER PTHR30290:SF9 1 527 2.7E-130 T 22-04-2016 APT61_RS03820 a6ccfe93e14c38ca475cb17c7e31ec16 529 Gene3D G3DSA:3.40.190.10 152 297 7.0E-42 T 22-04-2016 APT61_RS03820 a6ccfe93e14c38ca475cb17c7e31ec16 529 SUPERFAMILY SSF53850 39 524 1.27E-121 T 22-04-2016 APT61_RS21205 916a07782712c5e247d5291a7c3efcb3 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS21205 916a07782712c5e247d5291a7c3efcb3 165 PANTHER PTHR11560 1 165 2.4E-60 T 22-04-2016 APT61_RS21205 916a07782712c5e247d5291a7c3efcb3 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.535 T 22-04-2016 IPR022973 Ribosomal protein L10 APT61_RS21205 916a07782712c5e247d5291a7c3efcb3 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 161 1.0E-4 T 22-04-2016 APT61_RS21205 916a07782712c5e247d5291a7c3efcb3 165 Pfam PF00466 Ribosomal protein L10 5 101 5.6E-25 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 APT61_RS21205 916a07782712c5e247d5291a7c3efcb3 165 SUPERFAMILY SSF160369 4 160 3.01E-47 T 22-04-2016 APT61_RS09155 f270ccd6984c8faf787709e9944694ad 91 Pfam PF10762 Protein of unknown function (DUF2583) 1 88 1.0E-45 T 22-04-2016 IPR019698 Protein of unknown function DUF2583 APT61_RS15510 d1bcd97605f6e3e160a369843750e6fe 145 Pfam PF00583 Acetyltransferase (GNAT) family 57 132 3.0E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS15510 d1bcd97605f6e3e160a369843750e6fe 145 PANTHER PTHR10545 2 145 4.6E-37 T 22-04-2016 APT61_RS15510 d1bcd97605f6e3e160a369843750e6fe 145 Gene3D G3DSA:3.40.630.30 2 132 4.0E-33 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS15510 d1bcd97605f6e3e160a369843750e6fe 145 PANTHER PTHR10545:SF39 2 145 4.6E-37 T 22-04-2016 IPR032962 Acetyltransferase HPA2/HPA3 GO:0016746 APT61_RS15510 d1bcd97605f6e3e160a369843750e6fe 145 SUPERFAMILY SSF55729 1 132 7.2E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS04245 8124fbf004e92ae397b726d58ea19efd 90 PANTHER PTHR31435:SF3 1 90 1.1E-22 T 22-04-2016 APT61_RS04245 8124fbf004e92ae397b726d58ea19efd 90 Pfam PF14542 GCN5-related N-acetyl-transferase 9 87 6.3E-21 T 22-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase APT61_RS04245 8124fbf004e92ae397b726d58ea19efd 90 PANTHER PTHR31435 1 90 1.1E-22 T 22-04-2016 APT61_RS04245 8124fbf004e92ae397b726d58ea19efd 90 SUPERFAMILY SSF55729 2 88 6.85E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS04245 8124fbf004e92ae397b726d58ea19efd 90 Gene3D G3DSA:3.40.630.30 1 89 8.3E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS01200 f07ce7f61d954e03eb65fbcd0bb6b651 475 Gene3D G3DSA:3.30.830.10 26 252 2.1E-21 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 APT61_RS01200 f07ce7f61d954e03eb65fbcd0bb6b651 475 PANTHER PTHR11851 1 473 5.1E-84 T 22-04-2016 APT61_RS01200 f07ce7f61d954e03eb65fbcd0bb6b651 475 SUPERFAMILY SSF63411 319 460 5.76E-7 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APT61_RS01200 f07ce7f61d954e03eb65fbcd0bb6b651 475 Pfam PF05193 Peptidase M16 inactive domain 201 377 2.1E-17 T 22-04-2016 IPR007863 Peptidase M16, C-terminal APT61_RS01200 f07ce7f61d954e03eb65fbcd0bb6b651 475 PANTHER PTHR11851:SF136 1 473 5.1E-84 T 22-04-2016 APT61_RS01200 f07ce7f61d954e03eb65fbcd0bb6b651 475 SUPERFAMILY SSF63411 29 239 8.21E-25 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 APT61_RS01200 f07ce7f61d954e03eb65fbcd0bb6b651 475 Pfam PF00675 Insulinase (Peptidase family M16) 50 157 3.4E-8 T 22-04-2016 IPR011765 Peptidase M16, N-terminal APT61_RS02395 77ad338bbda0d7991a55fea0c28c6531 324 Gene3D G3DSA:3.90.180.10 1 86 2.9E-7 T 22-04-2016 IPR011032 GroES-like APT61_RS02395 77ad338bbda0d7991a55fea0c28c6531 324 PANTHER PTHR11695 15 323 3.4E-171 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 APT61_RS02395 77ad338bbda0d7991a55fea0c28c6531 324 PANTHER PTHR11695:SF13 15 323 3.4E-171 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI APT61_RS02395 77ad338bbda0d7991a55fea0c28c6531 324 Gene3D G3DSA:3.40.50.720 125 289 4.9E-79 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02395 77ad338bbda0d7991a55fea0c28c6531 324 SUPERFAMILY SSF51735 115 288 1.64E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS02395 77ad338bbda0d7991a55fea0c28c6531 324 SMART SM00829 12 321 0.0022 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 APT61_RS02395 77ad338bbda0d7991a55fea0c28c6531 324 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 323 2.9E-138 T 22-04-2016 IPR014188 Acrylyl-CoA reductase AcuI APT61_RS02395 77ad338bbda0d7991a55fea0c28c6531 324 SUPERFAMILY SSF50129 1 145 1.12E-42 T 22-04-2016 IPR011032 GroES-like APT61_RS02395 77ad338bbda0d7991a55fea0c28c6531 324 Pfam PF00107 Zinc-binding dehydrogenase 158 266 1.4E-14 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 APT61_RS07775 d3736535205f4b7e33c2694bab4cab4b 420 PANTHER PTHR30250 2 411 3.0E-34 T 22-04-2016 APT61_RS07775 d3736535205f4b7e33c2694bab4cab4b 420 Pfam PF01943 Polysaccharide biosynthesis protein 3 280 6.4E-22 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 APT61_RS07775 d3736535205f4b7e33c2694bab4cab4b 420 PANTHER PTHR30250:SF0 2 411 3.0E-34 T 22-04-2016 APT61_RS11200 9ffc8a9ca443ac8b0602de1f1a42a913 45 Pfam PF08136 30S ribosomal protein subunit S22 family 1 42 2.2E-26 T 22-04-2016 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 APT61_RS11200 9ffc8a9ca443ac8b0602de1f1a42a913 45 ProDom PD049510 RIBOSOMAL S22 30S RIBONUCLEOPROTEIN SUBUNIT D RIBOSOME- SEQUENCING DIRECT ASSOCIATED 1 41 3.0E-11 T 22-04-2016 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 APT61_RS17370 be4fdd4da80209e234df8c5ef1f6617d 457 PANTHER PTHR23510:SF6 1 400 3.9E-262 T 22-04-2016 APT61_RS17370 be4fdd4da80209e234df8c5ef1f6617d 457 PANTHER PTHR23510 1 400 3.9E-262 T 22-04-2016 APT61_RS17370 be4fdd4da80209e234df8c5ef1f6617d 457 SUPERFAMILY SSF103473 12 391 3.53E-64 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS17370 be4fdd4da80209e234df8c5ef1f6617d 457 Pfam PF07690 Major Facilitator Superfamily 20 345 8.2E-40 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS17370 be4fdd4da80209e234df8c5ef1f6617d 457 Gene3D G3DSA:1.20.1250.20 212 393 5.8E-21 T 22-04-2016 APT61_RS17370 be4fdd4da80209e234df8c5ef1f6617d 457 Gene3D G3DSA:1.20.1250.20 13 196 4.4E-35 T 22-04-2016 APT61_RS13460 6389021bc616e88a09650a7980ded098 395 TIGRFAM TIGR00896 CynX: cyanate transporter 15 368 3.1E-132 T 22-04-2016 IPR004747 Cyanate transport system protein GO:0016021 APT61_RS13460 6389021bc616e88a09650a7980ded098 395 Gene3D G3DSA:1.20.1250.20 207 389 6.7E-18 T 22-04-2016 APT61_RS13460 6389021bc616e88a09650a7980ded098 395 Gene3D G3DSA:1.20.1250.20 14 193 6.4E-16 T 22-04-2016 APT61_RS13460 6389021bc616e88a09650a7980ded098 395 Pfam PF07690 Major Facilitator Superfamily 21 349 6.1E-19 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS13460 6389021bc616e88a09650a7980ded098 395 PANTHER PTHR23523 1 394 1.2E-168 T 22-04-2016 APT61_RS13460 6389021bc616e88a09650a7980ded098 395 SUPERFAMILY SSF103473 7 389 8.89E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS13460 6389021bc616e88a09650a7980ded098 395 PANTHER PTHR23523:SF2 1 394 1.2E-168 T 22-04-2016 APT61_RS16080 c0df8f86526708a106594cff3a4781a1 638 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 149 6.4E-31 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS16080 c0df8f86526708a106594cff3a4781a1 638 PANTHER PTHR30505 43 638 3.0E-218 T 22-04-2016 APT61_RS16080 c0df8f86526708a106594cff3a4781a1 638 SUPERFAMILY SSF52794 166 261 1.71E-30 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS16080 c0df8f86526708a106594cff3a4781a1 638 Gene3D G3DSA:3.40.930.10 1 150 1.3E-38 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS16080 c0df8f86526708a106594cff3a4781a1 638 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 168 258 2.4E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 APT61_RS16080 c0df8f86526708a106594cff3a4781a1 638 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS16080 c0df8f86526708a106594cff3a4781a1 638 PANTHER PTHR30505:SF0 43 638 3.0E-218 T 22-04-2016 APT61_RS16080 c0df8f86526708a106594cff3a4781a1 638 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 276 622 3.0E-81 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 APT61_RS16080 c0df8f86526708a106594cff3a4781a1 638 Gene3D G3DSA:3.40.50.2300 164 262 3.0E-36 T 22-04-2016 APT61_RS16080 c0df8f86526708a106594cff3a4781a1 638 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 134 3.0E-35 T 22-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- APT61_RS16080 c0df8f86526708a106594cff3a4781a1 638 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 167 246 4.4E-23 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 APT61_RS16080 c0df8f86526708a106594cff3a4781a1 638 Pfam PF02378 Phosphotransferase system, EIIC 293 542 5.1E-8 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS16080 c0df8f86526708a106594cff3a4781a1 638 SUPERFAMILY SSF55804 1 150 7.19E-31 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 APT61_RS16120 60a5edcdb3eec528e37cfeef7fc6942e 115 PIRSF PIRSF000169 1 115 1.2E-40 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 APT61_RS16120 60a5edcdb3eec528e37cfeef7fc6942e 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 105 2.0E-6 T 22-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 APT61_RS16120 60a5edcdb3eec528e37cfeef7fc6942e 115 PANTHER PTHR38689:SF1 2 115 2.8E-58 T 22-04-2016 APT61_RS16120 60a5edcdb3eec528e37cfeef7fc6942e 115 PANTHER PTHR38689 2 115 2.8E-58 T 22-04-2016 APT61_RS16120 60a5edcdb3eec528e37cfeef7fc6942e 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 6.4E-36 T 22-04-2016 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 UniPathway: UPA00223 APT61_RS16120 60a5edcdb3eec528e37cfeef7fc6942e 115 SUPERFAMILY SSF81343 5 115 6.05E-30 T 22-04-2016 APT61_RS16120 60a5edcdb3eec528e37cfeef7fc6942e 115 Gene3D G3DSA:1.20.1300.10 1 115 5.2E-39 T 22-04-2016 APT61_RS08375 be35c920ccec32c64141c5f2c8ba3bc2 326 PANTHER PTHR32196 18 326 1.7E-243 T 22-04-2016 APT61_RS08375 be35c920ccec32c64141c5f2c8ba3bc2 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 56 313 2.2E-43 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS08375 be35c920ccec32c64141c5f2c8ba3bc2 326 PANTHER PTHR32196:SF37 18 326 1.7E-243 T 22-04-2016 APT61_RS14790 abc99380aef80547df4afaa3482be51a 187 SUPERFAMILY SSF159594 23 184 1.2E-29 T 22-04-2016 APT61_RS14790 abc99380aef80547df4afaa3482be51a 187 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 25 180 3.8E-40 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component APT61_RS14790 abc99380aef80547df4afaa3482be51a 187 Gene3D G3DSA:3.40.50.10610 14 181 3.6E-15 T 22-04-2016 IPR005586 ABC-type transport auxiliary lipoprotein component APT61_RS11785 bf9e1703e6b264ca5a75c72683bb3c38 258 SUPERFAMILY SSF52540 3 217 9.58E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11785 bf9e1703e6b264ca5a75c72683bb3c38 258 SMART SM00382 28 218 1.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS11785 bf9e1703e6b264ca5a75c72683bb3c38 258 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS11785 bf9e1703e6b264ca5a75c72683bb3c38 258 Gene3D G3DSA:3.40.50.300 3 218 8.6E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11785 bf9e1703e6b264ca5a75c72683bb3c38 258 PANTHER PTHR24220 5 216 1.4E-84 T 22-04-2016 APT61_RS11785 bf9e1703e6b264ca5a75c72683bb3c38 258 Pfam PF00005 ABC transporter 19 168 2.3E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS21530 41c61368581639e6b05bab98cdca31bd 551 PANTHER PTHR30003:SF0 2 551 0.0 T 22-04-2016 APT61_RS21530 41c61368581639e6b05bab98cdca31bd 551 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 544 1.1E-236 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APT61_RS21530 41c61368581639e6b05bab98cdca31bd 551 PANTHER PTHR30003 2 551 0.0 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APT61_RS21530 41c61368581639e6b05bab98cdca31bd 551 Pfam PF02652 L-lactate permease 16 542 7.5E-230 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 APT61_RS20800 080cd2360ea1f0b860e56ae051ed43af 431 PANTHER PTHR22604 274 428 4.2E-164 T 22-04-2016 APT61_RS20800 080cd2360ea1f0b860e56ae051ed43af 431 PANTHER PTHR22604 1 216 4.2E-164 T 22-04-2016 APT61_RS20800 080cd2360ea1f0b860e56ae051ed43af 431 Gene3D G3DSA:3.30.360.10 147 219 1.0E-51 T 22-04-2016 APT61_RS20800 080cd2360ea1f0b860e56ae051ed43af 431 Gene3D G3DSA:3.30.360.10 276 420 1.0E-51 T 22-04-2016 APT61_RS20800 080cd2360ea1f0b860e56ae051ed43af 431 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 220 1.7E-18 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APT61_RS20800 080cd2360ea1f0b860e56ae051ed43af 431 Gene3D G3DSA:3.40.50.720 2 146 1.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS20800 080cd2360ea1f0b860e56ae051ed43af 431 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 129 1.5E-17 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APT61_RS20800 080cd2360ea1f0b860e56ae051ed43af 431 PANTHER PTHR22604:SF128 274 428 4.2E-164 T 22-04-2016 APT61_RS20800 080cd2360ea1f0b860e56ae051ed43af 431 PANTHER PTHR22604:SF128 1 216 4.2E-164 T 22-04-2016 APT61_RS20800 080cd2360ea1f0b860e56ae051ed43af 431 SUPERFAMILY SSF55347 275 329 2.49E-29 T 22-04-2016 APT61_RS20800 080cd2360ea1f0b860e56ae051ed43af 431 SUPERFAMILY SSF55347 136 220 2.49E-29 T 22-04-2016 APT61_RS20800 080cd2360ea1f0b860e56ae051ed43af 431 SUPERFAMILY SSF51735 3 162 6.57E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS11110 6abf4eced1f3507565998f026e7c574a 274 PIRSF PIRSF028756 1 273 1.5E-116 T 22-04-2016 IPR016898 Polyphosphate kinase 2 APT61_RS11110 6abf4eced1f3507565998f026e7c574a 274 SUPERFAMILY SSF52540 52 241 8.49E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11110 6abf4eced1f3507565998f026e7c574a 274 PANTHER PTHR34383 21 274 4.5E-139 T 22-04-2016 APT61_RS11110 6abf4eced1f3507565998f026e7c574a 274 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 21 245 1.6E-97 T 22-04-2016 IPR022488 Polyphosphate kinase-2-related APT61_RS11110 6abf4eced1f3507565998f026e7c574a 274 Gene3D G3DSA:3.40.50.300 10 257 3.1E-102 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS11110 6abf4eced1f3507565998f026e7c574a 274 TIGRFAM TIGR03707 PPK2_P_aer: polyphosphate kinase 2 22 247 5.7E-108 T 22-04-2016 IPR022486 Polyphosphate kinase 2, PA0141 GO:0006793|GO:0008976 APT61_RS11110 6abf4eced1f3507565998f026e7c574a 274 PANTHER PTHR34383:SF1 21 274 4.5E-139 T 22-04-2016 APT61_RS09465 b36ac5048f2ea7545a60231d24b12233 210 Pfam PF03922 OmpW family 22 210 4.6E-67 T 22-04-2016 IPR005618 Outer membrane protein, OmpW GO:0019867 APT61_RS09465 b36ac5048f2ea7545a60231d24b12233 210 Gene3D G3DSA:2.40.160.20 21 210 1.9E-70 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS09465 b36ac5048f2ea7545a60231d24b12233 210 PANTHER PTHR36920 1 210 2.8E-87 T 22-04-2016 APT61_RS09465 b36ac5048f2ea7545a60231d24b12233 210 PANTHER PTHR36920:SF1 1 210 2.8E-87 T 22-04-2016 APT61_RS09465 b36ac5048f2ea7545a60231d24b12233 210 SUPERFAMILY SSF56925 22 210 1.52E-24 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS11415 127fd0985df751e1933e6e67bc8ae7ea 252 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 251 43.877 T 22-04-2016 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 APT61_RS11415 127fd0985df751e1933e6e67bc8ae7ea 252 Gene3D G3DSA:1.10.150.290 133 230 1.4E-29 T 22-04-2016 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 APT61_RS11415 127fd0985df751e1933e6e67bc8ae7ea 252 PANTHER PTHR10108:SF890 3 229 3.9E-93 T 22-04-2016 APT61_RS11415 127fd0985df751e1933e6e67bc8ae7ea 252 Pfam PF13489 Methyltransferase domain 12 176 6.2E-15 T 22-04-2016 APT61_RS11415 127fd0985df751e1933e6e67bc8ae7ea 252 PANTHER PTHR10108 3 229 3.9E-93 T 22-04-2016 APT61_RS11415 127fd0985df751e1933e6e67bc8ae7ea 252 SUPERFAMILY SSF53335 22 238 2.05E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS11415 127fd0985df751e1933e6e67bc8ae7ea 252 Gene3D G3DSA:3.40.50.150 11 132 1.1E-23 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS09580 36d03d61b1c77bf6deda69ce9223354f 102 Pfam PF06305 Protein of unknown function (DUF1049) 23 85 7.6E-20 T 22-04-2016 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 APT61_RS09580 36d03d61b1c77bf6deda69ce9223354f 102 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.7 T 22-04-2016 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 APT61_RS17585 f284bf595009e3d744ee46a2918bc6c7 86 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 2 85 6.2E-28 T 22-04-2016 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 APT61_RS13135 b5f1e68c5cb5073cab4dfc78264fccca 113 Pfam PF04355 SmpA / OmlA family 32 96 2.6E-11 T 22-04-2016 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 Gene3D G3DSA:3.40.50.720 2 240 1.1E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 Pfam PF00106 short chain dehydrogenase 3 191 1.7E-39 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 SUPERFAMILY SSF51735 2 240 2.6E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 PANTHER PTHR24322 146 178 1.1E-104 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 PANTHER PTHR24322 7 130 1.1E-104 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 0.0011 T 22-04-2016 APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 PANTHER PTHR24322:SF463 146 178 1.1E-104 T 22-04-2016 APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 PANTHER PTHR24322:SF463 7 130 1.1E-104 T 22-04-2016 APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 4.1E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 4.1E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 4.1E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.1E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 4.1E-19 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 4.2E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 4.2E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS17035 6a4314193da50ec4d99fce689e09962b 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 4.2E-5 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS03570 54b8f13974529f502ed5ca8da28a80ca 840 Pfam PF13954 PapC N-terminal domain 37 181 7.3E-36 T 22-04-2016 IPR025885 PapC, N-terminal domain GO:0005515 APT61_RS03570 54b8f13974529f502ed5ca8da28a80ca 840 SUPERFAMILY SSF141729 35 158 3.14E-29 T 22-04-2016 APT61_RS03570 54b8f13974529f502ed5ca8da28a80ca 840 Pfam PF00577 Outer membrane usher protein 198 752 1.0E-171 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APT61_RS03570 54b8f13974529f502ed5ca8da28a80ca 840 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 313 323 - T 22-04-2016 IPR018030 Fimbrial membrane usher, conserved site APT61_RS03570 54b8f13974529f502ed5ca8da28a80ca 840 PANTHER PTHR30451:SF4 2 840 0.0 T 22-04-2016 APT61_RS03570 54b8f13974529f502ed5ca8da28a80ca 840 PANTHER PTHR30451 2 840 0.0 T 22-04-2016 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 APT61_RS03570 54b8f13974529f502ed5ca8da28a80ca 840 Pfam PF13953 PapC C-terminal domain 765 819 1.4E-9 T 22-04-2016 IPR025949 PapC-like, C-terminal domain APT61_RS18945 735879f12886b328ca4a7487b9e268ad 210 PANTHER PTHR11777:SF7 15 210 4.2E-32 T 22-04-2016 APT61_RS18945 735879f12886b328ca4a7487b9e268ad 210 SUPERFAMILY SSF55186 85 202 2.62E-20 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 APT61_RS18945 735879f12886b328ca4a7487b9e268ad 210 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 167 195 9.4E-5 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 APT61_RS18945 735879f12886b328ca4a7487b9e268ad 210 PANTHER PTHR11777 15 210 4.2E-32 T 22-04-2016 APT61_RS18945 735879f12886b328ca4a7487b9e268ad 210 SUPERFAMILY SSF50447 1 82 3.88E-14 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain APT61_RS21365 fc78735018f74c5ff5d9eb1494f3f694 236 Pfam PF11254 Protein of unknown function (DUF3053) 15 229 1.4E-88 T 22-04-2016 IPR021413 Protein of unknown function DUF3053 APT61_RS22130 9c1f73e346bf37f12356fc9ae5c18c90 188 SUPERFAMILY SSF52218 6 179 3.22E-45 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS22130 9c1f73e346bf37f12356fc9ae5c18c90 188 Pfam PF03358 NADPH-dependent FMN reductase 6 148 4.0E-40 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APT61_RS22130 9c1f73e346bf37f12356fc9ae5c18c90 188 Gene3D G3DSA:3.40.50.360 2 187 2.7E-52 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS22130 9c1f73e346bf37f12356fc9ae5c18c90 188 PANTHER PTHR30543:SF6 1 187 1.6E-74 T 22-04-2016 APT61_RS22130 9c1f73e346bf37f12356fc9ae5c18c90 188 PANTHER PTHR30543 1 187 1.6E-74 T 22-04-2016 APT61_RS04940 da23361030a35831bd3641d096623c6b 331 SUPERFAMILY SSF53850 24 329 4.75E-92 T 22-04-2016 APT61_RS04940 da23361030a35831bd3641d096623c6b 331 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 312 3.7E-53 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 APT61_RS04940 da23361030a35831bd3641d096623c6b 331 Gene3D G3DSA:3.40.190.10 264 330 4.7E-57 T 22-04-2016 APT61_RS04940 da23361030a35831bd3641d096623c6b 331 Gene3D G3DSA:3.40.190.10 23 112 4.7E-57 T 22-04-2016 APT61_RS04940 da23361030a35831bd3641d096623c6b 331 Gene3D G3DSA:3.40.190.100 113 263 1.4E-54 T 22-04-2016 APT61_RS20480 44e81e0a5b093a50189e9e7869458567 117 Pfam PF13698 Domain of unknown function (DUF4156) 23 115 1.3E-30 T 22-04-2016 IPR025294 Protein of unknown function DUF4156 APT61_RS14430 55cbbf3caa27a37fd191f17e4afd6b80 198 PANTHER PTHR30546 1 197 2.1E-132 T 22-04-2016 APT61_RS14430 55cbbf3caa27a37fd191f17e4afd6b80 198 Gene3D G3DSA:3.40.50.360 1 198 5.7E-74 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS14430 55cbbf3caa27a37fd191f17e4afd6b80 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 196 1.6E-96 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 APT61_RS14430 55cbbf3caa27a37fd191f17e4afd6b80 198 Pfam PF03358 NADPH-dependent FMN reductase 3 141 1.3E-14 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 APT61_RS14430 55cbbf3caa27a37fd191f17e4afd6b80 198 SUPERFAMILY SSF52218 1 197 1.06E-62 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS14430 55cbbf3caa27a37fd191f17e4afd6b80 198 PANTHER PTHR30546:SF10 1 197 2.1E-132 T 22-04-2016 APT61_RS14430 55cbbf3caa27a37fd191f17e4afd6b80 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 198 40.44 T 22-04-2016 IPR010089 Flavoprotein WrbA GO:0010181|GO:0045892 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.62E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.62E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.62E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.62E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.62E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.62E-40 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 Gene3D G3DSA:3.40.50.720 6 252 1.0E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 PANTHER PTHR24322 15 142 3.7E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 PANTHER PTHR24322 158 190 3.7E-61 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 4.0E-57 T 22-04-2016 APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 8.3E-137 T 22-04-2016 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 SUPERFAMILY SSF51735 9 252 7.55E-77 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 8.11E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 8.11E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.11E-14 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 PANTHER PTHR24322:SF402 15 142 3.7E-61 T 22-04-2016 APT61_RS04305 48d4ad4b50499d8a5993d67b991dfcc0 253 PANTHER PTHR24322:SF402 158 190 3.7E-61 T 22-04-2016 APT61_RS11795 43b0bcb12a106a6c0189fc7e19ac2666 352 SUPERFAMILY SSF53850 35 246 2.9E-34 T 22-04-2016 APT61_RS11795 43b0bcb12a106a6c0189fc7e19ac2666 352 Gene3D G3DSA:3.40.190.10 126 235 1.8E-13 T 22-04-2016 APT61_RS11795 43b0bcb12a106a6c0189fc7e19ac2666 352 Pfam PF09084 NMT1/THI5 like 58 238 4.4E-11 T 22-04-2016 IPR015168 SsuA/THI5-like APT61_RS11795 43b0bcb12a106a6c0189fc7e19ac2666 352 TIGRFAM TIGR03427 ABC_peri_uca: ABC transporter periplasmic binding protein, urea carboxylase region 27 352 6.0E-165 T 22-04-2016 IPR017793 ABC transporter, urea utilisation-associated, substrate-binding protein APT61_RS01020 026ec6aeceabd0d6e9b35d2b8461e6f1 206 PIRSF PIRSF006324 1 206 8.9E-42 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS01020 026ec6aeceabd0d6e9b35d2b8461e6f1 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 3.1E-65 T 22-04-2016 IPR004778 Homoserine/Threonine efflux protein GO:0016021 APT61_RS01020 026ec6aeceabd0d6e9b35d2b8461e6f1 206 PANTHER PTHR30086:SF1 1 206 1.2E-133 T 22-04-2016 APT61_RS01020 026ec6aeceabd0d6e9b35d2b8461e6f1 206 PANTHER PTHR30086 1 206 1.2E-133 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS01020 026ec6aeceabd0d6e9b35d2b8461e6f1 206 Pfam PF01810 LysE type translocator 14 205 1.3E-55 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS14415 61a21a3c7a6197c4c169024bba56d4cc 442 PANTHER PTHR11119 6 428 2.3E-181 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS14415 61a21a3c7a6197c4c169024bba56d4cc 442 Pfam PF00860 Permease family 31 400 3.3E-100 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS14415 61a21a3c7a6197c4c169024bba56d4cc 442 TIGRFAM TIGR03616 RutG: pyrimidine utilization transport protein G 1 428 6.7E-245 T 22-04-2016 IPR019918 Pyrimidine permease RutG, predicted GO:0006864|GO:0015218 APT61_RS14415 61a21a3c7a6197c4c169024bba56d4cc 442 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 348 368 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APT61_RS14415 61a21a3c7a6197c4c169024bba56d4cc 442 PANTHER PTHR11119:SF49 6 428 2.3E-181 T 22-04-2016 APT61_RS14415 61a21a3c7a6197c4c169024bba56d4cc 442 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 26 424 6.5E-115 T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 APT61_RS21950 f81e095cdd737e4982a97042ab266b84 95 Pfam PF13710 ACT domain 17 77 2.0E-9 T 22-04-2016 APT61_RS21950 f81e095cdd737e4982a97042ab266b84 95 PANTHER PTHR30239:SF4 1 93 1.8E-61 T 22-04-2016 APT61_RS21950 f81e095cdd737e4982a97042ab266b84 95 SUPERFAMILY SSF55021 8 79 2.8E-16 T 22-04-2016 APT61_RS21950 f81e095cdd737e4982a97042ab266b84 95 PANTHER PTHR30239 1 93 1.8E-61 T 22-04-2016 APT61_RS21950 f81e095cdd737e4982a97042ab266b84 95 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 14 77 4.0E-15 T 22-04-2016 APT61_RS21950 f81e095cdd737e4982a97042ab266b84 95 Gene3D G3DSA:3.30.70.260 9 80 3.3E-21 T 22-04-2016 APT61_RS08790 8190fba1ff75022d2d6158f5c2c6aaa7 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 7 148 5.0E-55 T 22-04-2016 IPR009328 Protein of unknown function DUF986 APT61_RS08790 8190fba1ff75022d2d6158f5c2c6aaa7 152 PIRSF PIRSF020687 1 152 1.6E-63 T 22-04-2016 IPR009328 Protein of unknown function DUF986 APT61_RS08790 8190fba1ff75022d2d6158f5c2c6aaa7 152 Pfam PF06173 Protein of unknown function (DUF986) 4 150 9.0E-61 T 22-04-2016 IPR009328 Protein of unknown function DUF986 APT61_RS08790 8190fba1ff75022d2d6158f5c2c6aaa7 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 30.213 T 22-04-2016 IPR009328 Protein of unknown function DUF986 APT61_RS08125 9baab0c0e60feb66f131c8bc18d3c0e7 137 Pfam PF13987 YedD-like protein 25 129 4.0E-51 T 22-04-2016 IPR025596 YedD-like protein APT61_RS22150 7fc7a596587afe6628b56b07f401ecc5 512 Pfam PF02264 LamB porin 101 512 7.9E-82 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS22150 7fc7a596587afe6628b56b07f401ecc5 512 Gene3D G3DSA:2.40.170.10 99 512 2.3E-112 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS22150 7fc7a596587afe6628b56b07f401ecc5 512 PANTHER PTHR38762 75 512 8.1E-177 T 22-04-2016 APT61_RS22150 7fc7a596587afe6628b56b07f401ecc5 512 SUPERFAMILY SSF56935 99 512 8.55E-95 T 22-04-2016 APT61_RS22150 7fc7a596587afe6628b56b07f401ecc5 512 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 106 507 0.0 T 22-04-2016 IPR003192 Porin, LamB type GO:0006810|GO:0016020 APT61_RS22150 7fc7a596587afe6628b56b07f401ecc5 512 Pfam PF11471 Maltoporin periplasmic N-terminal extension 3 52 8.8E-11 T 22-04-2016 IPR021570 LamB-type porin N-terminal domain APT61_RS21760 e66aee66ed1ce48430291faee570d581 400 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 6.8E-200 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 APT61_RS21760 e66aee66ed1ce48430291faee570d581 400 Pfam PF03616 Sodium/glutamate symporter 2 366 7.5E-164 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 APT61_RS21760 e66aee66ed1ce48430291faee570d581 400 PANTHER PTHR36178 1 400 9.7E-205 T 22-04-2016 APT61_RS21760 e66aee66ed1ce48430291faee570d581 400 PANTHER PTHR36178:SF1 1 400 9.7E-205 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 APT61_RS01280 4e3875a5f34ad66f3ed3f675ece3e3b5 680 Pfam PF01432 Peptidase family M3 222 677 1.4E-174 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 APT61_RS01280 4e3875a5f34ad66f3ed3f675ece3e3b5 680 Gene3D G3DSA:1.20.1050.40 7 138 7.9E-25 T 22-04-2016 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal APT61_RS01280 4e3875a5f34ad66f3ed3f675ece3e3b5 680 PANTHER PTHR11804 3 678 0.0 T 22-04-2016 APT61_RS01280 4e3875a5f34ad66f3ed3f675ece3e3b5 680 Gene3D G3DSA:1.10.1370.10 140 349 4.5E-147 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APT61_RS01280 4e3875a5f34ad66f3ed3f675ece3e3b5 680 Gene3D G3DSA:1.10.1370.10 505 678 4.5E-147 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 APT61_RS01280 4e3875a5f34ad66f3ed3f675ece3e3b5 680 SUPERFAMILY SSF55486 1 677 1.22E-213 T 22-04-2016 APT61_RS01280 4e3875a5f34ad66f3ed3f675ece3e3b5 680 Gene3D G3DSA:3.40.390.10 360 504 1.2E-60 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 APT61_RS01280 4e3875a5f34ad66f3ed3f675ece3e3b5 680 PANTHER PTHR11804:SF8 3 678 0.0 T 22-04-2016 APT61_RS14915 4b4024ccd4c935d0ab7eb0a3a9010bde 267 Pfam PF02698 DUF218 domain 89 221 1.7E-26 T 22-04-2016 IPR003848 Domain of unknown function DUF218 APT61_RS14915 4b4024ccd4c935d0ab7eb0a3a9010bde 267 PANTHER PTHR30336:SF1 11 267 5.8E-72 T 22-04-2016 APT61_RS14915 4b4024ccd4c935d0ab7eb0a3a9010bde 267 PANTHER PTHR30336 11 267 5.8E-72 T 22-04-2016 APT61_RS14915 4b4024ccd4c935d0ab7eb0a3a9010bde 267 Gene3D G3DSA:3.40.50.620 83 217 2.5E-15 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS06275 d6feb8009cf7f009e5846a5a388ce6b7 299 PANTHER PTHR10755 6 299 2.6E-190 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS06275 d6feb8009cf7f009e5846a5a388ce6b7 299 Pfam PF01218 Coproporphyrinogen III oxidase 8 299 4.2E-133 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS06275 d6feb8009cf7f009e5846a5a388ce6b7 299 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 22-04-2016 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS06275 d6feb8009cf7f009e5846a5a388ce6b7 299 PIRSF PIRSF000166 1 299 1.5E-129 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS06275 d6feb8009cf7f009e5846a5a388ce6b7 299 Gene3D G3DSA:3.40.1500.10 3 299 3.9E-137 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS06275 d6feb8009cf7f009e5846a5a388ce6b7 299 PRINTS PR00073 Coprogen oxidase signature 160 189 9.9E-89 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS06275 d6feb8009cf7f009e5846a5a388ce6b7 299 PRINTS PR00073 Coprogen oxidase signature 123 145 9.9E-89 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS06275 d6feb8009cf7f009e5846a5a388ce6b7 299 PRINTS PR00073 Coprogen oxidase signature 232 259 9.9E-89 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS06275 d6feb8009cf7f009e5846a5a388ce6b7 299 PRINTS PR00073 Coprogen oxidase signature 29 45 9.9E-89 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS06275 d6feb8009cf7f009e5846a5a388ce6b7 299 PRINTS PR00073 Coprogen oxidase signature 46 67 9.9E-89 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS06275 d6feb8009cf7f009e5846a5a388ce6b7 299 PRINTS PR00073 Coprogen oxidase signature 260 286 9.9E-89 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS06275 d6feb8009cf7f009e5846a5a388ce6b7 299 PRINTS PR00073 Coprogen oxidase signature 88 112 9.9E-89 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS06275 d6feb8009cf7f009e5846a5a388ce6b7 299 SUPERFAMILY SSF102886 3 298 1.31E-137 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS06275 d6feb8009cf7f009e5846a5a388ce6b7 299 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 275 57.678 T 22-04-2016 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 APT61_RS05560 2b5948c2119167c6a365887b8b049c99 292 Pfam PF01513 ATP-NAD kinase 8 271 5.2E-80 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APT61_RS05560 2b5948c2119167c6a365887b8b049c99 292 Gene3D G3DSA:2.60.200.30 150 261 2.8E-42 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APT61_RS05560 2b5948c2119167c6a365887b8b049c99 292 PANTHER PTHR20275 5 291 5.0E-114 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APT61_RS05560 2b5948c2119167c6a365887b8b049c99 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 32.985 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APT61_RS05560 2b5948c2119167c6a365887b8b049c99 292 SUPERFAMILY SSF111331 7 289 5.1E-92 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain APT61_RS05560 2b5948c2119167c6a365887b8b049c99 292 Gene3D G3DSA:3.40.50.10330 2 149 5.8E-41 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 APT61_RS17270 62b009d89f5df50bb5712daa3f107eda 348 PANTHER PTHR10314:SF126 1 345 1.2E-204 T 22-04-2016 APT61_RS17270 62b009d89f5df50bb5712daa3f107eda 348 SUPERFAMILY SSF53686 16 332 1.18E-69 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS17270 62b009d89f5df50bb5712daa3f107eda 348 Gene3D G3DSA:3.40.50.1100 46 140 1.3E-21 T 22-04-2016 APT61_RS17270 62b009d89f5df50bb5712daa3f107eda 348 Gene3D G3DSA:3.40.50.1100 141 331 4.1E-41 T 22-04-2016 APT61_RS17270 62b009d89f5df50bb5712daa3f107eda 348 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 314 1.9E-44 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme APT61_RS17270 62b009d89f5df50bb5712daa3f107eda 348 PANTHER PTHR10314 1 345 1.2E-204 T 22-04-2016 APT61_RS04445 6635841529328d43a545f9afb26f7f57 134 Pfam PF10713 Protein of unknown function (DUF2509) 15 131 8.3E-32 T 22-04-2016 IPR019652 Protein of unknown function DUF2509 APT61_RS10115 3112034451d5cba070d10225c96a7285 443 Pfam PF11329 Protein of unknown function (DUF3131) 66 421 5.4E-93 T 22-04-2016 IPR021478 Protein of unknown function DUF3131 APT61_RS13800 0e5bef3a856733410bd3cad6a7613df9 209 Pfam PF04356 Protein of unknown function (DUF489) 7 199 9.8E-74 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 APT61_RS13800 0e5bef3a856733410bd3cad6a7613df9 209 SUPERFAMILY SSF101322 2 208 1.96E-80 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 APT61_RS13800 0e5bef3a856733410bd3cad6a7613df9 209 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 207 36.238 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 APT61_RS13800 0e5bef3a856733410bd3cad6a7613df9 209 PANTHER PTHR38100:SF1 2 209 1.6E-101 T 22-04-2016 APT61_RS13800 0e5bef3a856733410bd3cad6a7613df9 209 PANTHER PTHR38100 2 209 1.6E-101 T 22-04-2016 APT61_RS13800 0e5bef3a856733410bd3cad6a7613df9 209 Gene3D G3DSA:1.10.3890.10 2 209 1.3E-86 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 APT61_RS13800 0e5bef3a856733410bd3cad6a7613df9 209 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 205 3.0E-91 T 22-04-2016 IPR007451 Uncharacterised protein family UPF0274 APT61_RS13860 fe925abf40a05fdff028b59abc2f7936 414 Pfam PF12704 MacB-like periplasmic core domain 27 239 4.3E-15 T 22-04-2016 IPR025857 MacB-like periplasmic core domain APT61_RS13860 fe925abf40a05fdff028b59abc2f7936 414 PANTHER PTHR30489:SF0 3 414 1.6E-91 T 22-04-2016 APT61_RS13860 fe925abf40a05fdff028b59abc2f7936 414 Pfam PF02687 FtsX-like permease family 274 407 1.8E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APT61_RS13860 fe925abf40a05fdff028b59abc2f7936 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 5 414 1.7E-230 T 22-04-2016 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 APT61_RS13860 fe925abf40a05fdff028b59abc2f7936 414 PANTHER PTHR30489 3 414 1.6E-91 T 22-04-2016 APT61_RS13860 fe925abf40a05fdff028b59abc2f7936 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 2.8E-166 T 22-04-2016 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 APT61_RS10305 1dec7585f31999f40e8accb9cda4933c 217 Pfam PF00106 short chain dehydrogenase 4 180 2.3E-27 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS10305 1dec7585f31999f40e8accb9cda4933c 217 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 80 97 1.2E-6 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APT61_RS10305 1dec7585f31999f40e8accb9cda4933c 217 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 8 25 1.2E-6 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APT61_RS10305 1dec7585f31999f40e8accb9cda4933c 217 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 100 120 1.2E-6 T 22-04-2016 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 APT61_RS10305 1dec7585f31999f40e8accb9cda4933c 217 SUPERFAMILY SSF51735 4 187 4.89E-34 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10305 1dec7585f31999f40e8accb9cda4933c 217 PANTHER PTHR24322:SF315 6 134 3.8E-26 T 22-04-2016 APT61_RS10305 1dec7585f31999f40e8accb9cda4933c 217 PANTHER PTHR24322:SF315 150 182 3.8E-26 T 22-04-2016 APT61_RS10305 1dec7585f31999f40e8accb9cda4933c 217 Gene3D G3DSA:3.40.50.720 11 176 1.8E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS10305 1dec7585f31999f40e8accb9cda4933c 217 PANTHER PTHR24322 6 134 3.8E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS10305 1dec7585f31999f40e8accb9cda4933c 217 PANTHER PTHR24322 150 182 3.8E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR APT61_RS06945 90b692ccf1bd2e4c187fca38e6420c52 179 SUPERFAMILY SSF56925 55 175 3.22E-6 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS06945 90b692ccf1bd2e4c187fca38e6420c52 179 Gene3D G3DSA:2.40.160.10 23 175 7.4E-8 T 22-04-2016 IPR023614 Porin domain APT61_RS06945 90b692ccf1bd2e4c187fca38e6420c52 179 Pfam PF07437 YfaZ precursor 1 179 6.4E-78 T 22-04-2016 IPR009998 YfaZ APT61_RS21770 d54469421e28fc06390bc85b181b61f4 570 Pfam PF05170 AsmA family 1 539 5.3E-24 T 22-04-2016 IPR007844 AsmA APT61_RS12715 4fff36242de45ff44c965adc5b979caf 398 SUPERFAMILY SSF103473 7 375 1.83E-60 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS12715 4fff36242de45ff44c965adc5b979caf 398 Gene3D G3DSA:1.20.1250.20 190 376 1.0E-11 T 22-04-2016 APT61_RS12715 4fff36242de45ff44c965adc5b979caf 398 Pfam PF07690 Major Facilitator Superfamily 15 341 1.1E-42 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS12715 4fff36242de45ff44c965adc5b979caf 398 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 379 1.8E-127 T 22-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 APT61_RS12715 4fff36242de45ff44c965adc5b979caf 398 PANTHER PTHR23502 7 398 3.5E-201 T 22-04-2016 APT61_RS12715 4fff36242de45ff44c965adc5b979caf 398 PANTHER PTHR23502:SF28 7 398 3.5E-201 T 22-04-2016 APT61_RS12715 4fff36242de45ff44c965adc5b979caf 398 Gene3D G3DSA:1.20.1250.20 9 189 2.1E-29 T 22-04-2016 APT61_RS03305 e0d477edcfd951b7658322e3e6e6acb7 277 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 277 6.9E-116 T 22-04-2016 IPR009228 Capsid scaffolding protein GpO GO:0019069 APT61_RS17155 349501f6d07993a5fe49ae1b7f3782d5 217 Gene3D G3DSA:1.10.10.60 45 62 3.2E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS17155 349501f6d07993a5fe49ae1b7f3782d5 217 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site APT61_RS17155 349501f6d07993a5fe49ae1b7f3782d5 217 SUPERFAMILY SSF46689 1 67 1.6E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS17155 349501f6d07993a5fe49ae1b7f3782d5 217 PANTHER PTHR30328 1 214 4.9E-137 T 22-04-2016 APT61_RS17155 349501f6d07993a5fe49ae1b7f3782d5 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.4E-19 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS17155 349501f6d07993a5fe49ae1b7f3782d5 217 Gene3D G3DSA:1.10.357.10 63 209 6.5E-15 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS17155 349501f6d07993a5fe49ae1b7f3782d5 217 Gene3D G3DSA:1.10.10.60 6 44 4.2E-21 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS17155 349501f6d07993a5fe49ae1b7f3782d5 217 SUPERFAMILY SSF48498 84 200 1.91E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS17155 349501f6d07993a5fe49ae1b7f3782d5 217 PANTHER PTHR30328:SF26 1 214 4.9E-137 T 22-04-2016 APT61_RS17155 349501f6d07993a5fe49ae1b7f3782d5 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.0E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS17155 349501f6d07993a5fe49ae1b7f3782d5 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.0E-12 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS17155 349501f6d07993a5fe49ae1b7f3782d5 217 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 204 1.2E-49 T 22-04-2016 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 PANTHER PTHR10357:SF11 223 320 3.0E-121 T 22-04-2016 APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 PANTHER PTHR10357:SF11 434 672 3.0E-121 T 22-04-2016 APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 PANTHER PTHR10357:SF11 57 130 3.0E-121 T 22-04-2016 APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 PANTHER PTHR10357:SF11 349 410 3.0E-121 T 22-04-2016 APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 PANTHER PTHR10357:SF11 163 207 3.0E-121 T 22-04-2016 APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 PIRSF PIRSF036917 1 676 0.0 T 22-04-2016 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 Pfam PF00128 Alpha amylase, catalytic domain 226 594 3.3E-38 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 SUPERFAMILY SSF51445 374 643 8.07E-75 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 SUPERFAMILY SSF51445 178 318 8.07E-75 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 PANTHER PTHR10357 223 320 3.0E-121 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 PANTHER PTHR10357 434 672 3.0E-121 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 PANTHER PTHR10357 57 130 3.0E-121 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 PANTHER PTHR10357 349 410 3.0E-121 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 PANTHER PTHR10357 163 207 3.0E-121 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 Gene3D G3DSA:3.20.20.80 183 644 4.1E-85 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS21435 d78f29a7049163299cc7dd4e0c50e441 676 SMART SM00642 193 637 1.6E-81 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS21370 ffed92ae41a58cf7d5acdabec69a327d 96 SMART SM00530 37 91 0.0025 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS21370 ffed92ae41a58cf7d5acdabec69a327d 96 SUPERFAMILY SSF47413 39 83 1.34E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS21370 ffed92ae41a58cf7d5acdabec69a327d 96 PANTHER PTHR36511:SF1 1 95 1.1E-56 T 22-04-2016 APT61_RS21370 ffed92ae41a58cf7d5acdabec69a327d 96 PANTHER PTHR36511 1 95 1.1E-56 T 22-04-2016 APT61_RS21370 ffed92ae41a58cf7d5acdabec69a327d 96 Pfam PF01381 Helix-turn-helix 40 82 2.4E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 APT61_RS21370 ffed92ae41a58cf7d5acdabec69a327d 96 Gene3D G3DSA:1.10.260.40 40 88 1.0E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 APT61_RS19075 74faffb38831638de0547b999442f28c 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 3.7E-18 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS19075 74faffb38831638de0547b999442f28c 238 Gene3D G3DSA:3.40.50.2300 2 123 6.1E-36 T 22-04-2016 APT61_RS19075 74faffb38831638de0547b999442f28c 238 PANTHER PTHR26402 4 238 2.5E-156 T 22-04-2016 APT61_RS19075 74faffb38831638de0547b999442f28c 238 SMART SM00448 4 114 2.3E-38 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS19075 74faffb38831638de0547b999442f28c 238 PANTHER PTHR26402:SF586 4 238 2.5E-156 T 22-04-2016 APT61_RS19075 74faffb38831638de0547b999442f28c 238 SUPERFAMILY SSF52172 2 125 2.85E-36 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS19075 74faffb38831638de0547b999442f28c 238 SUPERFAMILY SSF46894 136 234 2.81E-21 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 APT61_RS19075 74faffb38831638de0547b999442f28c 238 SMART SM00862 156 232 2.2E-14 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 APT61_RS19075 74faffb38831638de0547b999442f28c 238 Gene3D G3DSA:1.10.10.10 135 233 3.9E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19075 74faffb38831638de0547b999442f28c 238 Pfam PF00072 Response regulator receiver domain 6 113 4.3E-27 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS14475 f2ce64ac45692878cf6f79399339115a 100 Pfam PF02627 Carboxymuconolactone decarboxylase family 15 98 4.7E-21 T 22-04-2016 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS14475 f2ce64ac45692878cf6f79399339115a 100 PANTHER PTHR33570 8 94 6.1E-29 T 22-04-2016 APT61_RS14475 f2ce64ac45692878cf6f79399339115a 100 PANTHER PTHR33570:SF1 8 94 6.1E-29 T 22-04-2016 APT61_RS14475 f2ce64ac45692878cf6f79399339115a 100 Gene3D G3DSA:1.20.1290.10 7 97 2.2E-24 T 22-04-2016 IPR029032 AhpD-like APT61_RS14475 f2ce64ac45692878cf6f79399339115a 100 SUPERFAMILY SSF69118 8 99 2.88E-29 T 22-04-2016 IPR029032 AhpD-like APT61_RS19690 992ed83b1befc0956f5268b2e693b439 230 Gene3D G3DSA:3.40.50.850 7 209 2.5E-44 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS19690 992ed83b1befc0956f5268b2e693b439 230 PANTHER PTHR14119:SF1 1 205 9.2E-114 T 22-04-2016 APT61_RS19690 992ed83b1befc0956f5268b2e693b439 230 SUPERFAMILY SSF52499 5 207 2.75E-44 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS19690 992ed83b1befc0956f5268b2e693b439 230 PANTHER PTHR14119 1 205 9.2E-114 T 22-04-2016 APT61_RS19690 992ed83b1befc0956f5268b2e693b439 230 Pfam PF00857 Isochorismatase family 16 168 2.8E-27 T 22-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 APT61_RS12895 81a573570be9bca14d4c649e7691b2b2 423 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 132 409 2.1E-87 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 APT61_RS12895 81a573570be9bca14d4c649e7691b2b2 423 PANTHER PTHR30508:SF0 31 418 8.5E-136 T 22-04-2016 APT61_RS12895 81a573570be9bca14d4c649e7691b2b2 423 SUPERFAMILY SSF101960 12 420 1.1E-111 T 22-04-2016 APT61_RS12895 81a573570be9bca14d4c649e7691b2b2 423 Pfam PF01458 Uncharacterized protein family (UPF0051) 170 393 7.3E-71 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 APT61_RS12895 81a573570be9bca14d4c649e7691b2b2 423 PANTHER PTHR30508 31 418 8.5E-136 T 22-04-2016 APT61_RS03255 69e9502139c415d21b42c9994ccff5d0 77 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 9 77 3.0E-29 T 22-04-2016 IPR020126 Protein of unknown function DUF2732 APT61_RS03255 69e9502139c415d21b42c9994ccff5d0 77 Pfam PF10809 Protein of unknown function (DUF2732) 1 76 4.0E-27 T 22-04-2016 IPR020126 Protein of unknown function DUF2732 APT61_RS13740 8bfd653102a7bad73325215fd648afbf 184 Gene3D G3DSA:1.10.3600.10 31 145 1.9E-15 T 22-04-2016 IPR009364 Putative bacterial toxin ydaT APT61_RS13740 8bfd653102a7bad73325215fd648afbf 184 Pfam PF06254 Putative bacterial toxin ydaT 71 151 1.9E-10 T 22-04-2016 IPR009364 Putative bacterial toxin ydaT APT61_RS05835 d09f492cdd9900cc8372860307881282 450 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS05835 d09f492cdd9900cc8372860307881282 450 PANTHER PTHR30175 1 447 2.6E-207 T 22-04-2016 APT61_RS05835 d09f492cdd9900cc8372860307881282 450 Pfam PF00367 phosphotransferase system, EIIB 10 42 6.0E-11 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 APT61_RS05835 d09f492cdd9900cc8372860307881282 450 PANTHER PTHR30175:SF3 1 447 2.6E-207 T 22-04-2016 APT61_RS05835 d09f492cdd9900cc8372860307881282 450 Gene3D G3DSA:3.30.1360.60 6 83 1.4E-23 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS05835 d09f492cdd9900cc8372860307881282 450 SUPERFAMILY SSF55604 7 82 2.48E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 APT61_RS05835 d09f492cdd9900cc8372860307881282 450 Pfam PF02378 Phosphotransferase system, EIIC 114 388 1.5E-33 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 APT61_RS03775 4be3083f8bc674c517edab67df1ddd76 346 PANTHER PTHR11732 13 330 4.1E-179 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS03775 4be3083f8bc674c517edab67df1ddd76 346 Gene3D G3DSA:3.20.20.100 12 331 3.1E-87 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS03775 4be3083f8bc674c517edab67df1ddd76 346 PANTHER PTHR11732:SF191 13 330 4.1E-179 T 22-04-2016 APT61_RS03775 4be3083f8bc674c517edab67df1ddd76 346 Pfam PF00248 Aldo/keto reductase family 28 332 1.1E-77 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS03775 4be3083f8bc674c517edab67df1ddd76 346 SUPERFAMILY SSF51430 13 331 1.7E-87 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS13585 67af1ca972b29f9189f87e4191e865a8 251 Pfam PF05100 Phage minor tail protein L 24 248 1.4E-90 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APT61_RS13585 67af1ca972b29f9189f87e4191e865a8 251 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 6 247 6.3E-64 T 22-04-2016 IPR006487 Bacteriophage lambda, GpL, minor tail APT61_RS20760 5015b6d970c946380915b4775d6654e9 139 Gene3D G3DSA:3.40.50.740 61 136 4.8E-25 T 22-04-2016 APT61_RS20760 5015b6d970c946380915b4775d6654e9 139 SUPERFAMILY SSF53706 1 139 3.4E-48 T 22-04-2016 APT61_RS20760 5015b6d970c946380915b4775d6654e9 139 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 2.0E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS20760 5015b6d970c946380915b4775d6654e9 139 SMART SM00926 1 54 3.1E-14 T 22-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 APT61_RS20760 5015b6d970c946380915b4775d6654e9 139 Pfam PF00384 Molybdopterin oxidoreductase 61 138 1.9E-17 T 22-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 APT61_RS20760 5015b6d970c946380915b4775d6654e9 139 Gene3D G3DSA:2.20.25.90 1 54 4.6E-20 T 22-04-2016 APT61_RS20760 5015b6d970c946380915b4775d6654e9 139 PANTHER PTHR11615:SF112 1 139 1.1E-48 T 22-04-2016 APT61_RS20760 5015b6d970c946380915b4775d6654e9 139 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 6 23 - T 22-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 APT61_RS20760 5015b6d970c946380915b4775d6654e9 139 PANTHER PTHR11615 1 139 1.1E-48 T 22-04-2016 APT61_RS13865 180b8f57fbaa29c7844c9bcd1f466d0e 233 Gene3D G3DSA:3.40.50.300 5 225 7.3E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13865 180b8f57fbaa29c7844c9bcd1f466d0e 233 PANTHER PTHR24220 7 230 3.7E-129 T 22-04-2016 APT61_RS13865 180b8f57fbaa29c7844c9bcd1f466d0e 233 PANTHER PTHR24220:SF111 7 230 3.7E-129 T 22-04-2016 APT61_RS13865 180b8f57fbaa29c7844c9bcd1f466d0e 233 Pfam PF00005 ABC transporter 25 173 3.3E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS13865 180b8f57fbaa29c7844c9bcd1f466d0e 233 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 1.8E-110 T 22-04-2016 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 APT61_RS13865 180b8f57fbaa29c7844c9bcd1f466d0e 233 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS13865 180b8f57fbaa29c7844c9bcd1f466d0e 233 SUPERFAMILY SSF52540 5 224 2.03E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13865 180b8f57fbaa29c7844c9bcd1f466d0e 233 SMART SM00382 34 222 1.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS17440 44977d5d82ca388249f8132d97eda7ed 179 Gene3D G3DSA:2.60.40.1620 43 177 2.2E-69 T 22-04-2016 IPR021658 Domain of unknown function DUF3251 APT61_RS17440 44977d5d82ca388249f8132d97eda7ed 179 Pfam PF11622 Protein of unknown function (DUF3251) 20 177 3.6E-78 T 22-04-2016 IPR021658 Domain of unknown function DUF3251 APT61_RS08735 5981343835e0dadc78d0cba73f67f0ac 293 PANTHER PTHR10120:SF19 1 290 9.0E-115 T 22-04-2016 APT61_RS08735 5981343835e0dadc78d0cba73f67f0ac 293 Gene3D G3DSA:3.30.2010.10 69 156 2.6E-32 T 22-04-2016 APT61_RS08735 5981343835e0dadc78d0cba73f67f0ac 293 Pfam PF01435 Peptidase family M48 75 288 2.4E-39 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 APT61_RS08735 5981343835e0dadc78d0cba73f67f0ac 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 26.861 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 APT61_RS08735 5981343835e0dadc78d0cba73f67f0ac 293 PANTHER PTHR10120 1 290 9.0E-115 T 22-04-2016 APT61_RS01890 d850c1071b786b06c57e8f283424210f 695 PANTHER PTHR30509:SF4 1 690 0.0 T 22-04-2016 APT61_RS01890 d850c1071b786b06c57e8f283424210f 695 PANTHER PTHR30509 1 690 0.0 T 22-04-2016 APT61_RS01890 d850c1071b786b06c57e8f283424210f 695 Pfam PF13515 Fusaric acid resistance protein-like 377 498 2.0E-18 T 22-04-2016 APT61_RS01890 d850c1071b786b06c57e8f283424210f 695 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 673 1.2E-228 T 22-04-2016 IPR010020 Integral membrane protein, YccS/YhfK APT61_RS01890 d850c1071b786b06c57e8f283424210f 695 Pfam PF12805 FUSC-like inner membrane protein yccS 63 330 1.2E-72 T 22-04-2016 IPR032692 Integral membrane protein YccS, N-terminal APT61_RS20280 98af7f7c4d798b7ca02b21a1a0204427 102 Pfam PF07338 Protein of unknown function (DUF1471) 46 101 1.4E-15 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS20280 98af7f7c4d798b7ca02b21a1a0204427 102 Gene3D G3DSA:3.30.1660.10 36 102 2.7E-15 T 22-04-2016 IPR025543 Dodecin-like APT61_RS20280 98af7f7c4d798b7ca02b21a1a0204427 102 SUPERFAMILY SSF159871 3 101 1.19E-17 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS06385 b8bcf603bf1db08fa8b674291eb529c3 113 Pfam PF14282 FlxA-like protein 18 104 4.6E-13 T 22-04-2016 IPR025577 FlxA-like protein APT61_RS10000 4c2c47bb93863a91eac3c147a166594e 106 PIRSF PIRSF025560 1 106 7.6E-38 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 APT61_RS10000 4c2c47bb93863a91eac3c147a166594e 106 Pfam PF07027 Protein of unknown function (DUF1318) 18 106 4.5E-29 T 22-04-2016 IPR008309 Uncharacterised conserved protein UCP025560 APT61_RS09925 a070e39265350bc75edfb02a83456936 322 Gene3D G3DSA:1.10.287.950 71 274 9.5E-51 T 22-04-2016 APT61_RS09925 a070e39265350bc75edfb02a83456936 322 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 110 302 1.3E-49 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS09925 a070e39265350bc75edfb02a83456936 322 SUPERFAMILY SSF58104 23 304 1.7E-59 T 22-04-2016 APT61_RS09925 a070e39265350bc75edfb02a83456936 322 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 154 181 1.0E-42 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS09925 a070e39265350bc75edfb02a83456936 322 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 77 106 1.0E-42 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS09925 a070e39265350bc75edfb02a83456936 322 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 183 212 1.0E-42 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS09925 a070e39265350bc75edfb02a83456936 322 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 231 260 1.0E-42 T 22-04-2016 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 APT61_RS09925 a070e39265350bc75edfb02a83456936 322 PANTHER PTHR32089 1 306 2.5E-138 T 22-04-2016 APT61_RS09925 a070e39265350bc75edfb02a83456936 322 PANTHER PTHR32089:SF48 1 306 2.5E-138 T 22-04-2016 APT61_RS09925 a070e39265350bc75edfb02a83456936 322 SMART SM00283 56 303 5.0E-72 T 22-04-2016 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 APT61_RS14205 db6f8054d681be3201324c3be6bcbeaa 386 PANTHER PTHR36927 1 375 2.3E-62 T 22-04-2016 APT61_RS14205 db6f8054d681be3201324c3be6bcbeaa 386 Pfam PF01757 Acyltransferase family 10 357 1.3E-34 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 APT61_RS14205 db6f8054d681be3201324c3be6bcbeaa 386 Hamap MF_01066 Glucans biosynthesis protein C [mdoC]. 1 386 47.073 T 22-04-2016 IPR023723 Glucan biosynthesis protein C GO:0016741 UniPathway: UPA00637 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 125 133 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 Gene3D G3DSA:1.10.441.10 273 286 2.9E-24 T 22-04-2016 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 Gene3D G3DSA:1.10.441.10 140 230 2.9E-24 T 22-04-2016 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 Pfam PF01238 Phosphomannose isomerase type I 1 355 1.1E-110 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 381 2.9E-126 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 PANTHER PTHR10309:SF0 1 373 1.1E-137 T 22-04-2016 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 Gene3D G3DSA:2.60.120.10 287 373 4.3E-10 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 PANTHER PTHR10309 1 373 1.1E-137 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 Gene3D G3DSA:2.60.120.10 237 272 9.0E-64 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 Gene3D G3DSA:2.60.120.10 6 139 9.0E-64 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 254 279 - T 22-04-2016 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 PIRSF PIRSF001480 1 390 8.7E-107 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 5.9E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 PRINTS PR00714 Phosphomannose isomerase type I signature 235 254 5.9E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 5.9E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 PRINTS PR00714 Phosphomannose isomerase type I signature 125 148 5.9E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 PRINTS PR00714 Phosphomannose isomerase type I signature 273 292 5.9E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 PRINTS PR00714 Phosphomannose isomerase type I signature 219 234 5.9E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 PRINTS PR00714 Phosphomannose isomerase type I signature 254 273 5.9E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 PRINTS PR00714 Phosphomannose isomerase type I signature 80 101 5.9E-74 T 22-04-2016 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|UniPathway: UPA00126 APT61_RS12195 cbe64a7e688d551beb3157e60db2e183 390 SUPERFAMILY SSF51182 1 373 4.02E-99 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS03345 2b51d93c5048ce362cf803b87bc6b666 141 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 3 135 5.5E-51 T 22-04-2016 IPR020000 Bacteriophage P2, LysB APT61_RS18520 69303669c8880f8cec2b799641719b06 187 SMART SM00644 16 166 9.8E-58 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APT61_RS18520 69303669c8880f8cec2b799641719b06 187 PANTHER PTHR30417:SF4 1 186 2.0E-93 T 22-04-2016 APT61_RS18520 69303669c8880f8cec2b799641719b06 187 SUPERFAMILY SSF55846 2 181 8.24E-68 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APT61_RS18520 69303669c8880f8cec2b799641719b06 187 PANTHER PTHR30417 1 186 2.0E-93 T 22-04-2016 APT61_RS18520 69303669c8880f8cec2b799641719b06 187 Gene3D G3DSA:3.40.80.10 3 181 2.4E-70 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APT61_RS18520 69303669c8880f8cec2b799641719b06 187 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 59 167 2.3E-19 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 APT61_RS17335 15d70e274f96363702d3f8eb58b34b43 192 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 19 2.3E-5 T 22-04-2016 IPR012640 Membrane lipoprotein, lipid attachment site APT61_RS17335 15d70e274f96363702d3f8eb58b34b43 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 6.4E-52 T 22-04-2016 IPR005619 Uncharacterised protein family, YajG APT61_RS08420 a9480b309054ab6ce5e5f99955a430db 167 SUPERFAMILY SSF50341 16 156 6.54E-40 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APT61_RS08420 a9480b309054ab6ce5e5f99955a430db 167 Gene3D G3DSA:2.30.30.40 93 144 1.6E-9 T 22-04-2016 APT61_RS08420 a9480b309054ab6ce5e5f99955a430db 167 PANTHER PTHR22617 1 167 1.6E-61 T 22-04-2016 APT61_RS08420 a9480b309054ab6ce5e5f99955a430db 167 SMART SM00260 14 151 2.4E-48 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APT61_RS08420 a9480b309054ab6ce5e5f99955a430db 167 Gene3D G3DSA:2.40.50.180 56 92 1.8E-10 T 22-04-2016 APT61_RS08420 a9480b309054ab6ce5e5f99955a430db 167 Pfam PF01584 CheW-like domain 18 154 7.0E-37 T 22-04-2016 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 APT61_RS08030 1239da42005425afe87ff25950a66575 75 Pfam PF10733 Protein of unknown function (DUF2525) 18 75 6.0E-30 T 22-04-2016 IPR019669 Uncharacterised bacterial stress protein YodD APT61_RS05350 76ca6d81b64cea4221afaad16bfa66c4 290 PANTHER PTHR30565:SF3 2 273 1.3E-133 T 22-04-2016 APT61_RS05350 76ca6d81b64cea4221afaad16bfa66c4 290 PANTHER PTHR30565 2 273 1.3E-133 T 22-04-2016 APT61_RS05350 76ca6d81b64cea4221afaad16bfa66c4 290 Pfam PF05067 Manganese containing catalase 1 286 1.1E-90 T 22-04-2016 IPR007760 Manganese catalase APT61_RS05350 76ca6d81b64cea4221afaad16bfa66c4 290 SUPERFAMILY SSF47240 1 285 1.3E-82 T 22-04-2016 IPR009078 Ferritin-like superfamily APT61_RS05350 76ca6d81b64cea4221afaad16bfa66c4 290 Gene3D G3DSA:1.20.1260.10 1 199 3.9E-75 T 22-04-2016 IPR012347 Ferritin-related APT61_RS22165 ca74cf9f898e3ebf649f99e5c30a9ed3 296 Gene3D G3DSA:1.10.3720.10 26 295 4.2E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS22165 ca74cf9f898e3ebf649f99e5c30a9ed3 296 PANTHER PTHR30425 5 295 7.0E-137 T 22-04-2016 APT61_RS22165 ca74cf9f898e3ebf649f99e5c30a9ed3 296 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 294 1.0E-84 T 22-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 APT61_RS22165 ca74cf9f898e3ebf649f99e5c30a9ed3 296 PANTHER PTHR30425:SF0 5 295 7.0E-137 T 22-04-2016 APT61_RS22165 ca74cf9f898e3ebf649f99e5c30a9ed3 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 289 2.0E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS22165 ca74cf9f898e3ebf649f99e5c30a9ed3 296 SUPERFAMILY SSF161098 33 286 2.75E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS10570 28f5d98c502c89585bfbb10e3b0c3589 198 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 2 196 3.5E-99 T 22-04-2016 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 APT61_RS10570 28f5d98c502c89585bfbb10e3b0c3589 198 PANTHER PTHR10108 4 185 4.9E-81 T 22-04-2016 APT61_RS10570 28f5d98c502c89585bfbb10e3b0c3589 198 SUPERFAMILY SSF53335 2 197 2.7E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS10570 28f5d98c502c89585bfbb10e3b0c3589 198 PANTHER PTHR10108:SF927 4 185 4.9E-81 T 22-04-2016 APT61_RS10570 28f5d98c502c89585bfbb10e3b0c3589 198 Gene3D G3DSA:3.40.50.150 3 196 8.2E-37 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS10570 28f5d98c502c89585bfbb10e3b0c3589 198 Pfam PF03848 Tellurite resistance protein TehB 3 193 4.0E-99 T 22-04-2016 IPR015985 Tellurite resistance methyltransferase TehB-like domain APT61_RS16220 aca84f46e060578f218f7ba7fec3582c 180 Pfam PF03925 SeqA protein C-terminal domain 70 178 3.6E-50 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 APT61_RS16220 aca84f46e060578f218f7ba7fec3582c 180 PIRSF PIRSF019401 1 180 2.1E-51 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 APT61_RS16220 aca84f46e060578f218f7ba7fec3582c 180 Gene3D G3DSA:1.10.1220.10 1 40 6.0E-26 T 22-04-2016 IPR013321 Arc-type ribbon-helix-helix GO:0006355 APT61_RS16220 aca84f46e060578f218f7ba7fec3582c 180 SUPERFAMILY SSF47598 1 34 7.34E-14 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APT61_RS16220 aca84f46e060578f218f7ba7fec3582c 180 Gene3D G3DSA:1.20.1380.10 67 180 6.2E-55 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 APT61_RS16220 aca84f46e060578f218f7ba7fec3582c 180 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 180 44.51 T 22-04-2016 IPR005621 Negative modulator of initiation of replicationr SeqA GO:0003677|GO:0032297 APT61_RS16220 aca84f46e060578f218f7ba7fec3582c 180 SUPERFAMILY SSF82808 65 180 3.79E-49 T 22-04-2016 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 APT61_RS04755 9d8f7fbb12d694c6eb693c2db8103628 125 PIRSF PIRSF029394 1 125 1.2E-48 T 22-04-2016 IPR016918 Uncharacterised conserved protein UCP029394 APT61_RS04755 9d8f7fbb12d694c6eb693c2db8103628 125 SUPERFAMILY SSF54427 4 123 2.76E-35 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS04755 9d8f7fbb12d694c6eb693c2db8103628 125 Pfam PF14534 Domain of unknown function (DUF4440) 22 117 4.6E-7 T 22-04-2016 IPR027843 Domain of unknown function DUF4440 APT61_RS04755 9d8f7fbb12d694c6eb693c2db8103628 125 Gene3D G3DSA:3.10.450.50 3 123 8.2E-40 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS05540 5ef17a3344ae33cf0b08a9bbf29e60f2 145 SUPERFAMILY SSF55961 1 143 7.54E-35 T 22-04-2016 APT61_RS05540 5ef17a3344ae33cf0b08a9bbf29e60f2 145 PANTHER PTHR12901 1 142 1.8E-64 T 22-04-2016 APT61_RS05540 5ef17a3344ae33cf0b08a9bbf29e60f2 145 PANTHER PTHR12901:SF7 1 142 1.8E-64 T 22-04-2016 APT61_RS05540 5ef17a3344ae33cf0b08a9bbf29e60f2 145 Gene3D G3DSA:3.30.530.20 1 142 3.4E-48 T 22-04-2016 IPR023393 START-like domain APT61_RS05540 5ef17a3344ae33cf0b08a9bbf29e60f2 145 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 135 1.2E-32 T 22-04-2016 IPR005031 Coenzyme Q-binding protein COQ10, START domain APT61_RS19455 0c316f4bf8e59e52cda4d8057587088b 182 SUPERFAMILY SSF51182 1 180 1.38E-82 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS19455 0c316f4bf8e59e52cda4d8057587088b 182 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 176 7.6E-79 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APT61_RS19455 0c316f4bf8e59e52cda4d8057587088b 182 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 166 8.0E-76 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APT61_RS19455 0c316f4bf8e59e52cda4d8057587088b 182 Gene3D G3DSA:2.60.120.10 1 180 4.1E-87 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS19455 0c316f4bf8e59e52cda4d8057587088b 182 PANTHER PTHR21047 1 182 1.2E-79 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APT61_RS19455 0c316f4bf8e59e52cda4d8057587088b 182 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 2 179 2.8E-84 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 APT61_RS06820 6c8a8fe95bb655933a11b751c739b149 404 SUPERFAMILY SSF53383 7 401 4.54E-94 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS06820 6c8a8fe95bb655933a11b751c739b149 404 Pfam PF00155 Aminotransferase class I and II 58 394 1.0E-46 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS06820 6c8a8fe95bb655933a11b751c739b149 404 PANTHER PTHR11751:SF303 9 399 6.7E-197 T 22-04-2016 APT61_RS06820 6c8a8fe95bb655933a11b751c739b149 404 Gene3D G3DSA:3.40.640.10 51 279 2.4E-68 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS06820 6c8a8fe95bb655933a11b751c739b149 404 PANTHER PTHR11751 9 399 6.7E-197 T 22-04-2016 APT61_RS06820 6c8a8fe95bb655933a11b751c739b149 404 Gene3D G3DSA:3.90.1150.10 280 403 4.3E-39 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS09810 aa7eb2b94c94c58bc9701aec24064c22 446 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 444 9.0E-125 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 APT61_RS09810 aa7eb2b94c94c58bc9701aec24064c22 446 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 443 1.3E-132 T 22-04-2016 IPR010263 Type VI secretion protein, VC_A0114 APT61_RS09810 aa7eb2b94c94c58bc9701aec24064c22 446 PANTHER PTHR35566 1 446 4.0E-192 T 22-04-2016 APT61_RS09810 aa7eb2b94c94c58bc9701aec24064c22 446 PANTHER PTHR35566:SF3 1 446 4.0E-192 T 22-04-2016 APT61_RS16730 a09efc59eb8dc71367c53268a09a7c2a 184 TIGRFAM TIGR02563 cas_Csy4: CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST 4 184 4.4E-57 T 22-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 APT61_RS16730 a09efc59eb8dc71367c53268a09a7c2a 184 Pfam PF09618 CRISPR-associated protein (Cas_Csy4) 4 184 3.7E-63 T 22-04-2016 IPR013396 CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST GO:0004519|GO:0043571 APT61_RS20980 31a0eadb8000ce31b5bdfddc7561c280 369 Pfam PF08402 TOBE domain 281 353 1.2E-11 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 APT61_RS20980 31a0eadb8000ce31b5bdfddc7561c280 369 PANTHER PTHR24220 5 335 2.2E-192 T 22-04-2016 APT61_RS20980 31a0eadb8000ce31b5bdfddc7561c280 369 Gene3D G3DSA:3.40.50.300 3 236 6.5E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20980 31a0eadb8000ce31b5bdfddc7561c280 369 SMART SM00382 28 211 8.9E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS20980 31a0eadb8000ce31b5bdfddc7561c280 369 SUPERFAMILY SSF50331 236 364 2.67E-31 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal APT61_RS20980 31a0eadb8000ce31b5bdfddc7561c280 369 Gene3D G3DSA:2.40.50.100 239 287 1.2E-22 T 22-04-2016 APT61_RS20980 31a0eadb8000ce31b5bdfddc7561c280 369 SUPERFAMILY SSF52540 4 243 1.12E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20980 31a0eadb8000ce31b5bdfddc7561c280 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS20980 31a0eadb8000ce31b5bdfddc7561c280 369 Pfam PF00005 ABC transporter 20 161 1.5E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS20980 31a0eadb8000ce31b5bdfddc7561c280 369 Gene3D G3DSA:2.40.50.140 288 345 7.5E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS20980 31a0eadb8000ce31b5bdfddc7561c280 369 PANTHER PTHR24220:SF572 5 335 2.2E-192 T 22-04-2016 APT61_RS16245 0901572bb4cd84f658796f51dad18b34 109 Pfam PF13982 YbfN-like lipoprotein 21 107 6.8E-43 T 22-04-2016 IPR025727 YbfN-like lipoprotein APT61_RS01615 5e2e170c013e6708507d308fd55807b0 197 Pfam PF01914 MarC family integral membrane protein 2 195 1.3E-63 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APT61_RS01615 5e2e170c013e6708507d308fd55807b0 197 PANTHER PTHR33508:SF4 1 197 1.8E-95 T 22-04-2016 APT61_RS01615 5e2e170c013e6708507d308fd55807b0 197 PANTHER PTHR33508 1 197 1.8E-95 T 22-04-2016 APT61_RS01615 5e2e170c013e6708507d308fd55807b0 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 191 1.7E-31 T 22-04-2016 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 APT61_RS11075 934233be87b4e67facba8664f1662e26 216 Pfam PF11153 Protein of unknown function (DUF2931) 5 214 3.9E-45 T 22-04-2016 IPR021326 Protein of unknown function DUF2931 APT61_RS20430 b5d72a1aff9789ace2d678cb2e33cb86 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 APT61_RS20430 b5d72a1aff9789ace2d678cb2e33cb86 244 SUPERFAMILY SSF54292 3 106 3.85E-28 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 APT61_RS20430 b5d72a1aff9789ace2d678cb2e33cb86 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site APT61_RS20430 b5d72a1aff9789ace2d678cb2e33cb86 244 Gene3D G3DSA:3.10.20.30 2 106 3.5E-33 T 22-04-2016 IPR012675 Beta-grasp domain APT61_RS20430 b5d72a1aff9789ace2d678cb2e33cb86 244 Gene3D G3DSA:1.10.1060.10 107 231 1.2E-36 T 22-04-2016 APT61_RS20430 b5d72a1aff9789ace2d678cb2e33cb86 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 3.1E-31 T 22-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APT61_RS20430 b5d72a1aff9789ace2d678cb2e33cb86 244 SUPERFAMILY SSF46548 107 229 3.84E-31 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 APT61_RS20430 b5d72a1aff9789ace2d678cb2e33cb86 244 PANTHER PTHR11921 2 229 4.1E-100 T 22-04-2016 APT61_RS20430 b5d72a1aff9789ace2d678cb2e33cb86 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 7.5E-97 T 22-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 APT61_RS20430 b5d72a1aff9789ace2d678cb2e33cb86 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 1.4E-11 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain APT61_RS19815 4ab1a03cd1a5c1e0dcdec67d2c5415b2 81 Pfam PF04606 Ogr/Delta-like zinc finger 3 48 1.9E-16 T 22-04-2016 IPR007684 Zinc finger, Ogr/Delta-type APT61_RS13470 6a32bc21d57c5891895c6b9577809db9 114 PANTHER PTHR36849:SF1 1 114 3.1E-45 T 22-04-2016 APT61_RS13470 6a32bc21d57c5891895c6b9577809db9 114 PANTHER PTHR36849 1 114 3.1E-45 T 22-04-2016 APT61_RS13470 6a32bc21d57c5891895c6b9577809db9 114 Pfam PF04343 Protein of unknown function, DUF488 4 111 4.0E-31 T 22-04-2016 IPR007438 Protein of unknown function DUF488 APT61_RS00495 fc0752da2598744d06a0428c6592d10d 434 PANTHER PTHR10283 14 432 2.0E-17 T 22-04-2016 APT61_RS00495 fc0752da2598744d06a0428c6592d10d 434 Pfam PF00939 Sodium:sulfate symporter transmembrane region 15 433 1.1E-22 T 22-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 APT61_RS06765 18efcd197cbe2cbf1b75c91468e6acb3 209 Gene3D G3DSA:1.20.1050.10 84 201 4.4E-47 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS06765 18efcd197cbe2cbf1b75c91468e6acb3 209 SUPERFAMILY SSF52833 1 84 3.39E-21 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS06765 18efcd197cbe2cbf1b75c91468e6acb3 209 PANTHER PTHR11260 1 209 1.5E-65 T 22-04-2016 APT61_RS06765 18efcd197cbe2cbf1b75c91468e6acb3 209 SUPERFAMILY SSF47616 78 206 5.32E-35 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS06765 18efcd197cbe2cbf1b75c91468e6acb3 209 Pfam PF00043 Glutathione S-transferase, C-terminal domain 134 197 5.7E-10 T 22-04-2016 IPR004046 Glutathione S-transferase, C-terminal APT61_RS06765 18efcd197cbe2cbf1b75c91468e6acb3 209 Gene3D G3DSA:3.40.30.10 1 83 5.6E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS06765 18efcd197cbe2cbf1b75c91468e6acb3 209 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 1.4E-11 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APT61_RS06765 18efcd197cbe2cbf1b75c91468e6acb3 209 PANTHER PTHR11260:SF285 1 209 1.5E-65 T 22-04-2016 APT61_RS09690 a484b710222ed4cd710ded14b2ce583e 565 PANTHER PTHR10357:SF132 84 344 3.2E-164 T 22-04-2016 APT61_RS09690 a484b710222ed4cd710ded14b2ce583e 565 PANTHER PTHR10357:SF132 393 549 3.2E-164 T 22-04-2016 APT61_RS09690 a484b710222ed4cd710ded14b2ce583e 565 PANTHER PTHR10357 84 344 3.2E-164 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS09690 a484b710222ed4cd710ded14b2ce583e 565 PANTHER PTHR10357 393 549 3.2E-164 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 APT61_RS09690 a484b710222ed4cd710ded14b2ce583e 565 Gene3D G3DSA:3.20.20.80 213 486 8.6E-105 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS09690 a484b710222ed4cd710ded14b2ce583e 565 Gene3D G3DSA:3.20.20.80 50 137 8.6E-105 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS09690 a484b710222ed4cd710ded14b2ce583e 565 Gene3D G3DSA:3.90.400.10 138 206 4.7E-23 T 22-04-2016 APT61_RS09690 a484b710222ed4cd710ded14b2ce583e 565 Gene3D G3DSA:2.60.40.1180 496 563 3.0E-17 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta APT61_RS09690 a484b710222ed4cd710ded14b2ce583e 565 Pfam PF00128 Alpha amylase, catalytic domain 87 342 7.4E-18 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS09690 a484b710222ed4cd710ded14b2ce583e 565 PIRSF PIRSF003059 6 564 1.1E-204 T 22-04-2016 IPR016377 Sucrose phosphorylase GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 APT61_RS09690 a484b710222ed4cd710ded14b2ce583e 565 SMART SM00642 15 484 1.0E-5 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 APT61_RS09690 a484b710222ed4cd710ded14b2ce583e 565 SUPERFAMILY SSF51445 401 549 2.9E-80 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS09690 a484b710222ed4cd710ded14b2ce583e 565 SUPERFAMILY SSF51445 48 361 2.9E-80 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS10495 da0ea2917d0ba8cd77c80beb3abea2f4 91 PANTHER PTHR33677 1 91 7.0E-30 T 22-04-2016 APT61_RS10495 da0ea2917d0ba8cd77c80beb3abea2f4 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 83 1.8E-20 T 22-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 APT61_RS21935 c585b897fec57ae6d1fe96e44564448b 438 SUPERFAMILY SSF103473 13 427 1.7E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS21935 c585b897fec57ae6d1fe96e44564448b 438 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 21 424 5.1E-96 T 22-04-2016 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 APT61_RS21935 c585b897fec57ae6d1fe96e44564448b 438 PANTHER PTHR23514:SF11 1 180 2.0E-228 T 22-04-2016 APT61_RS21935 c585b897fec57ae6d1fe96e44564448b 438 PANTHER PTHR23514:SF11 198 435 2.0E-228 T 22-04-2016 APT61_RS21935 c585b897fec57ae6d1fe96e44564448b 438 PANTHER PTHR23514 1 180 2.0E-228 T 22-04-2016 APT61_RS21935 c585b897fec57ae6d1fe96e44564448b 438 PANTHER PTHR23514 198 435 2.0E-228 T 22-04-2016 APT61_RS21935 c585b897fec57ae6d1fe96e44564448b 438 Pfam PF07690 Major Facilitator Superfamily 45 274 2.4E-12 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS21935 c585b897fec57ae6d1fe96e44564448b 438 Pfam PF07690 Major Facilitator Superfamily 293 435 3.4E-9 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS21935 c585b897fec57ae6d1fe96e44564448b 438 Gene3D G3DSA:1.20.1250.20 23 234 5.8E-13 T 22-04-2016 APT61_RS21935 c585b897fec57ae6d1fe96e44564448b 438 Gene3D G3DSA:1.20.1250.20 253 432 6.4E-13 T 22-04-2016 APT61_RS08990 9377b8c249a2b29bb6346886f6e08f12 154 Pfam PF01047 MarR family 47 101 5.4E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS08990 9377b8c249a2b29bb6346886f6e08f12 154 SUPERFAMILY SSF46785 12 153 3.54E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS08990 9377b8c249a2b29bb6346886f6e08f12 154 SMART SM00347 37 137 1.7E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 APT61_RS08990 9377b8c249a2b29bb6346886f6e08f12 154 Gene3D G3DSA:1.10.10.10 8 153 6.8E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS08990 9377b8c249a2b29bb6346886f6e08f12 154 PANTHER PTHR33164 14 154 7.9E-20 T 22-04-2016 APT61_RS03045 12ae501f959e078040dbaac522f8a846 126 Pfam PF13721 SecD export protein N-terminal TM region 13 103 7.7E-15 T 22-04-2016 IPR027398 SecD export protein N-terminal TM domain APT61_RS03045 12ae501f959e078040dbaac522f8a846 126 Hamap MF_00904 Modulator protein MzrA [mzrA]. 2 115 25.865 T 22-04-2016 IPR026574 Modulator protein MzrA APT61_RS17525 f2478b6400bb3b3db506e6feb49c6d50 1043 SUPERFAMILY SSF52540 895 1029 1.48E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17525 f2478b6400bb3b3db506e6feb49c6d50 1043 SUPERFAMILY SSF52540 1 223 1.48E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17525 f2478b6400bb3b3db506e6feb49c6d50 1043 SUPERFAMILY SSF52540 823 837 1.48E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17525 f2478b6400bb3b3db506e6feb49c6d50 1043 TIGRFAM TIGR00618 sbcc: exonuclease SbcC 1 1035 2.3E-268 T 22-04-2016 IPR004592 Nuclease SbcC, gammaproteobacteria type APT61_RS17525 f2478b6400bb3b3db506e6feb49c6d50 1043 Pfam PF13476 AAA domain 5 222 1.9E-29 T 22-04-2016 APT61_RS17525 f2478b6400bb3b3db506e6feb49c6d50 1043 Pfam PF13558 Putative exonuclease SbcCD, C subunit 928 997 1.1E-14 T 22-04-2016 APT61_RS17525 f2478b6400bb3b3db506e6feb49c6d50 1043 PANTHER PTHR32114 2 1042 9.7E-134 T 22-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 APT61_RS17525 f2478b6400bb3b3db506e6feb49c6d50 1043 PANTHER PTHR32114:SF2 2 1042 9.7E-134 T 22-04-2016 APT61_RS17525 f2478b6400bb3b3db506e6feb49c6d50 1043 Gene3D G3DSA:3.40.50.300 1 174 8.3E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17525 f2478b6400bb3b3db506e6feb49c6d50 1043 Gene3D G3DSA:3.40.50.300 906 1030 8.3E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17525 f2478b6400bb3b3db506e6feb49c6d50 1043 Gene3D G3DSA:3.40.50.300 789 790 8.3E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17525 f2478b6400bb3b3db506e6feb49c6d50 1043 Gene3D G3DSA:3.40.50.300 175 266 1.1E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS13310 e50aba7cb5332ecea2fbe4b5d79b8786 71 SUPERFAMILY SSF50249 3 70 1.96E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS13310 e50aba7cb5332ecea2fbe4b5d79b8786 71 SMART SM00357 6 71 1.5E-6 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 APT61_RS13310 e50aba7cb5332ecea2fbe4b5d79b8786 71 Gene3D G3DSA:2.40.50.140 5 70 1.4E-10 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS13310 e50aba7cb5332ecea2fbe4b5d79b8786 71 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 9.7E-16 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 APT61_RS13310 e50aba7cb5332ecea2fbe4b5d79b8786 71 PIRSF PIRSF002599 1 71 1.1E-10 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 APT61_RS06725 9359dbc860a4a122b027c04dc37952b5 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 APT61_RS06725 9359dbc860a4a122b027c04dc37952b5 260 PANTHER PTHR18966:SF227 26 253 1.6E-157 T 22-04-2016 APT61_RS06725 9359dbc860a4a122b027c04dc37952b5 260 SMART SM00062 27 256 1.1E-77 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS06725 9359dbc860a4a122b027c04dc37952b5 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 1.9E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS06725 9359dbc860a4a122b027c04dc37952b5 260 Gene3D G3DSA:3.40.190.10 115 213 1.0E-31 T 22-04-2016 APT61_RS06725 9359dbc860a4a122b027c04dc37952b5 260 Gene3D G3DSA:3.40.190.10 26 113 4.2E-44 T 22-04-2016 APT61_RS06725 9359dbc860a4a122b027c04dc37952b5 260 Gene3D G3DSA:3.40.190.10 215 257 4.2E-44 T 22-04-2016 APT61_RS06725 9359dbc860a4a122b027c04dc37952b5 260 PANTHER PTHR18966 26 253 1.6E-157 T 22-04-2016 APT61_RS06725 9359dbc860a4a122b027c04dc37952b5 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 2.3E-99 T 22-04-2016 IPR005768 Lysine-arginine-ornithine-binding periplasmic protein GO:0005215|GO:0006810|GO:0030288 APT61_RS06725 9359dbc860a4a122b027c04dc37952b5 260 SUPERFAMILY SSF53850 26 257 6.45E-65 T 22-04-2016 APT61_RS04255 7f044aa8484b2593d3f5f6c213e792c3 153 Pfam PF05232 Chlorhexidine efflux transporter 9 72 5.0E-24 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter APT61_RS04255 7f044aa8484b2593d3f5f6c213e792c3 153 Pfam PF05232 Chlorhexidine efflux transporter 77 139 7.3E-22 T 22-04-2016 IPR007896 Chlorhexidine efflux transporter APT61_RS04255 7f044aa8484b2593d3f5f6c213e792c3 153 PANTHER PTHR42641:SF2 1 151 4.1E-87 T 22-04-2016 APT61_RS04255 7f044aa8484b2593d3f5f6c213e792c3 153 PANTHER PTHR42641 1 151 4.1E-87 T 22-04-2016 APT61_RS21660 ff510746907bef5557ace8a1a3069b9e 256 SUPERFAMILY SSF53448 3 148 1.5E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS21660 ff510746907bef5557ace8a1a3069b9e 256 Gene3D G3DSA:3.90.550.10 4 128 4.7E-16 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS21660 ff510746907bef5557ace8a1a3069b9e 256 Pfam PF00535 Glycosyl transferase family 2 6 146 2.4E-18 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APT61_RS21660 ff510746907bef5557ace8a1a3069b9e 256 PANTHER PTHR10859:SF99 4 132 9.9E-28 T 22-04-2016 APT61_RS21660 ff510746907bef5557ace8a1a3069b9e 256 PANTHER PTHR10859 4 132 9.9E-28 T 22-04-2016 APT61_RS13290 8b7351638390c1876db91a0563f17cc7 284 SUPERFAMILY SSF51430 3 273 2.1E-77 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS13290 8b7351638390c1876db91a0563f17cc7 284 Gene3D G3DSA:3.20.20.100 10 273 4.9E-76 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS13290 8b7351638390c1876db91a0563f17cc7 284 Pfam PF00248 Aldo/keto reductase family 17 270 5.3E-53 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain APT61_RS13290 8b7351638390c1876db91a0563f17cc7 284 PRINTS PR00069 Aldo-keto reductase signature 97 115 3.8E-16 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS13290 8b7351638390c1876db91a0563f17cc7 284 PRINTS PR00069 Aldo-keto reductase signature 206 230 3.8E-16 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS13290 8b7351638390c1876db91a0563f17cc7 284 PRINTS PR00069 Aldo-keto reductase signature 127 144 3.8E-16 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 APT61_RS13290 8b7351638390c1876db91a0563f17cc7 284 PANTHER PTHR11732 2 273 4.3E-116 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta APT61_RS13290 8b7351638390c1876db91a0563f17cc7 284 PANTHER PTHR11732:SF98 2 273 4.3E-116 T 22-04-2016 APT61_RS17490 d9e7bd98a1a9ebe2e98c580bba9f157f 200 Gene3D G3DSA:3.40.30.10 4 159 1.4E-55 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS17490 d9e7bd98a1a9ebe2e98c580bba9f157f 200 SUPERFAMILY SSF52833 1 193 6.68E-65 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS17490 d9e7bd98a1a9ebe2e98c580bba9f157f 200 Pfam PF00578 AhpC/TSA family 5 139 1.8E-33 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS17490 d9e7bd98a1a9ebe2e98c580bba9f157f 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 4.5E-11 T 22-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 APT61_RS17490 d9e7bd98a1a9ebe2e98c580bba9f157f 200 Gene3D G3DSA:3.30.1020.10 160 194 2.6E-14 T 22-04-2016 APT61_RS17490 d9e7bd98a1a9ebe2e98c580bba9f157f 200 PIRSF PIRSF000239 1 198 1.9E-58 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 APT61_RS17490 d9e7bd98a1a9ebe2e98c580bba9f157f 200 PANTHER PTHR10681 1 193 4.4E-85 T 22-04-2016 APT61_RS15125 75fab64ea8f4bc614707d432e05274d6 299 Pfam PF03956 Membrane protein of unknown function (DUF340) 113 297 1.0E-56 T 22-04-2016 IPR005642 Lysine exporter LysO APT61_RS15125 75fab64ea8f4bc614707d432e05274d6 299 PANTHER PTHR35804:SF1 2 298 3.6E-96 T 22-04-2016 APT61_RS15125 75fab64ea8f4bc614707d432e05274d6 299 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 135 296 1.0E-68 T 22-04-2016 IPR005642 Lysine exporter LysO APT61_RS15125 75fab64ea8f4bc614707d432e05274d6 299 PANTHER PTHR35804 2 298 3.6E-96 T 22-04-2016 APT61_RS04580 18f221342518d5cc97edbf1008c47a67 257 PANTHER PTHR11079:SF60 3 245 1.8E-93 T 22-04-2016 APT61_RS04580 18f221342518d5cc97edbf1008c47a67 257 SUPERFAMILY SSF55120 3 243 1.02E-61 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS04580 18f221342518d5cc97edbf1008c47a67 257 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS04580 18f221342518d5cc97edbf1008c47a67 257 PANTHER PTHR11079 3 245 1.8E-93 T 22-04-2016 APT61_RS04580 18f221342518d5cc97edbf1008c47a67 257 Pfam PF00849 RNA pseudouridylate synthase 11 170 5.4E-29 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS08900 bf45a8b62f439534332a90e60e792378 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 1.4E-44 T 22-04-2016 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 APT61_RS08900 bf45a8b62f439534332a90e60e792378 176 Gene3D G3DSA:1.20.1550.10 1 174 2.2E-70 T 22-04-2016 IPR023380 Disulphide bond formation protein DsbB-like domain APT61_RS08900 bf45a8b62f439534332a90e60e792378 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.008 T 22-04-2016 IPR022920 Disulphide bond formation protein DsbB APT61_RS08900 bf45a8b62f439534332a90e60e792378 176 SUPERFAMILY SSF158442 15 161 1.7E-45 T 22-04-2016 APT61_RS08900 bf45a8b62f439534332a90e60e792378 176 PANTHER PTHR36570 1 176 8.3E-100 T 22-04-2016 APT61_RS08900 bf45a8b62f439534332a90e60e792378 176 PANTHER PTHR36570:SF2 1 176 8.3E-100 T 22-04-2016 APT61_RS04780 e801bb9e94f1eb9e8e71774c45c5a92f 253 PANTHER PTHR24220:SF309 4 246 4.1E-85 T 22-04-2016 APT61_RS04780 e801bb9e94f1eb9e8e71774c45c5a92f 253 Pfam PF00005 ABC transporter 18 167 2.8E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS04780 e801bb9e94f1eb9e8e71774c45c5a92f 253 Gene3D G3DSA:3.40.50.300 4 235 2.4E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04780 e801bb9e94f1eb9e8e71774c45c5a92f 253 SMART SM00382 27 242 7.0E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS04780 e801bb9e94f1eb9e8e71774c45c5a92f 253 SUPERFAMILY SSF52540 3 225 1.04E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS04780 e801bb9e94f1eb9e8e71774c45c5a92f 253 PANTHER PTHR24220 4 246 4.1E-85 T 22-04-2016 APT61_RS08295 6e8b5fce663929ac55b38584e9dbff1e 304 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 288 2.6E-52 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS08295 6e8b5fce663929ac55b38584e9dbff1e 304 PANTHER PTHR11795:SF371 5 304 9.5E-131 T 22-04-2016 APT61_RS08295 6e8b5fce663929ac55b38584e9dbff1e 304 PANTHER PTHR11795 5 304 9.5E-131 T 22-04-2016 APT61_RS14095 dda4f6d87c09385d95418f9cc1515b1a 218 Pfam PF13144 Chaperone for flagella basal body P-ring formation 25 214 3.6E-42 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal APT61_RS14095 dda4f6d87c09385d95418f9cc1515b1a 218 SMART SM00858 94 156 3.4E-11 T 22-04-2016 IPR013974 SAF domain APT61_RS14095 dda4f6d87c09385d95418f9cc1515b1a 218 Gene3D G3DSA:3.90.1210.10 93 132 1.0E-4 T 22-04-2016 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal APT61_RS14095 dda4f6d87c09385d95418f9cc1515b1a 218 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 83 216 1.1E-38 T 22-04-2016 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal APT61_RS14095 dda4f6d87c09385d95418f9cc1515b1a 218 PANTHER PTHR36307 30 217 2.5E-35 T 22-04-2016 APT61_RS00770 921a3ae63e9db9bf474e56e20dacb5dd 112 Pfam PF04219 Protein of unknown function, DUF 10 98 7.4E-40 T 22-04-2016 IPR007335 Protein of unknown function DUF413 APT61_RS14920 81d27aa6f8ad0a909afc48d7d73427e8 297 SUPERFAMILY SSF56112 14 270 6.12E-21 T 22-04-2016 IPR011009 Protein kinase-like domain APT61_RS14920 81d27aa6f8ad0a909afc48d7d73427e8 297 Pfam PF01636 Phosphotransferase enzyme family 64 236 3.8E-8 T 22-04-2016 IPR002575 Aminoglycoside phosphotransferase APT61_RS10930 dc81108e52ff9bb70e9369265efd063f 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 8.3E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS10930 dc81108e52ff9bb70e9369265efd063f 193 Gene3D G3DSA:1.10.357.10 1 188 1.4E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS10930 dc81108e52ff9bb70e9369265efd063f 193 Pfam PF13977 Bacterial transcriptional repressor 82 163 1.4E-10 T 22-04-2016 APT61_RS10930 dc81108e52ff9bb70e9369265efd063f 193 SUPERFAMILY SSF46689 3 71 1.9E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS10930 dc81108e52ff9bb70e9369265efd063f 193 SUPERFAMILY SSF48498 85 188 6.81E-12 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS10930 dc81108e52ff9bb70e9369265efd063f 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 7.1E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS10930 dc81108e52ff9bb70e9369265efd063f 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 7.1E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS10930 dc81108e52ff9bb70e9369265efd063f 193 PANTHER PTHR30055 1 193 1.1E-19 T 22-04-2016 APT61_RS16535 346a6c89d7026735b639356c26c7f30e 229 TIGRFAM TIGR01691 enolase-ppase: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 222 1.0E-102 T 22-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 APT61_RS16535 346a6c89d7026735b639356c26c7f30e 229 Pfam PF00702 haloacid dehalogenase-like hydrolase 2 196 2.2E-7 T 22-04-2016 APT61_RS16535 346a6c89d7026735b639356c26c7f30e 229 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 108 196 3.5E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS16535 346a6c89d7026735b639356c26c7f30e 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 114 127 2.4E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS16535 346a6c89d7026735b639356c26c7f30e 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 191 204 2.4E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS16535 346a6c89d7026735b639356c26c7f30e 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 2.4E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS16535 346a6c89d7026735b639356c26c7f30e 229 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 164 184 2.4E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS16535 346a6c89d7026735b639356c26c7f30e 229 SUPERFAMILY SSF56784 1 222 3.12E-61 T 22-04-2016 IPR023214 HAD-like domain APT61_RS16535 346a6c89d7026735b639356c26c7f30e 229 Hamap MF_01681 Enolase-phosphatase E1 [mtnC]. 1 222 41.731 T 22-04-2016 IPR023943 Enolase-phosphatase E1 GO:0000287|GO:0019509|GO:0043874 KEGG: 00270+3.1.3.77|UniPathway: UPA00904|UniPathway: UPA00904 APT61_RS16535 346a6c89d7026735b639356c26c7f30e 229 Gene3D G3DSA:3.40.50.1000 1 221 1.9E-24 T 22-04-2016 IPR023214 HAD-like domain APT61_RS16535 346a6c89d7026735b639356c26c7f30e 229 PANTHER PTHR20371 2 204 3.6E-96 T 22-04-2016 APT61_RS10065 3b9abe114e3c56018d1da676b5ad1e68 140 PANTHER PTHR12418:SF24 5 127 6.3E-49 T 22-04-2016 APT61_RS10065 3b9abe114e3c56018d1da676b5ad1e68 140 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 18 130 3.4E-38 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain APT61_RS10065 3b9abe114e3c56018d1da676b5ad1e68 140 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 20 132 7.5E-50 T 22-04-2016 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 KEGG: 00360+3.1.2.-|KEGG: 00362+3.1.2.-|KEGG: 00592+3.1.2.-|KEGG: 00903+3.1.2.- APT61_RS10065 3b9abe114e3c56018d1da676b5ad1e68 140 Gene3D G3DSA:3.10.129.10 3 134 5.5E-49 T 22-04-2016 IPR029069 HotDog domain APT61_RS10065 3b9abe114e3c56018d1da676b5ad1e68 140 SUPERFAMILY SSF54637 1 128 7.48E-31 T 22-04-2016 IPR029069 HotDog domain APT61_RS10065 3b9abe114e3c56018d1da676b5ad1e68 140 Pfam PF03061 Thioesterase superfamily 50 122 7.9E-19 T 22-04-2016 IPR006683 Thioesterase domain APT61_RS10065 3b9abe114e3c56018d1da676b5ad1e68 140 PANTHER PTHR12418 5 127 6.3E-49 T 22-04-2016 APT61_RS01285 387773aa1aa95e569a66e5caf7ad4d80 254 SUPERFAMILY SSF53335 14 246 3.89E-75 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS01285 387773aa1aa95e569a66e5caf7ad4d80 254 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 37.792 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 APT61_RS01285 387773aa1aa95e569a66e5caf7ad4d80 254 PANTHER PTHR36112:SF1 8 253 1.7E-145 T 22-04-2016 APT61_RS01285 387773aa1aa95e569a66e5caf7ad4d80 254 Gene3D G3DSA:3.40.50.150 57 247 1.5E-74 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS01285 387773aa1aa95e569a66e5caf7ad4d80 254 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 3.8E-105 T 22-04-2016 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 APT61_RS01285 387773aa1aa95e569a66e5caf7ad4d80 254 Gene3D G3DSA:3.40.1630.10 1 56 1.1E-26 T 22-04-2016 APT61_RS01285 387773aa1aa95e569a66e5caf7ad4d80 254 PANTHER PTHR36112 8 253 1.7E-145 T 22-04-2016 APT61_RS15215 74827d557d44589867025241aecafb99 402 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 163 191 - T 22-04-2016 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 APT61_RS15215 74827d557d44589867025241aecafb99 402 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 401 3.0E-144 T 22-04-2016 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 APT61_RS15215 74827d557d44589867025241aecafb99 402 Pfam PF00482 Type II secretion system (T2SS), protein F 272 391 2.9E-21 T 22-04-2016 IPR018076 Type II secretion system F domain APT61_RS15215 74827d557d44589867025241aecafb99 402 Pfam PF00482 Type II secretion system (T2SS), protein F 68 191 2.1E-30 T 22-04-2016 IPR018076 Type II secretion system F domain APT61_RS15215 74827d557d44589867025241aecafb99 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 64 76 5.0E-38 T 22-04-2016 IPR003004 GspF/PilC family APT61_RS15215 74827d557d44589867025241aecafb99 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 382 401 5.0E-38 T 22-04-2016 IPR003004 GspF/PilC family APT61_RS15215 74827d557d44589867025241aecafb99 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 163 191 5.0E-38 T 22-04-2016 IPR003004 GspF/PilC family APT61_RS15215 74827d557d44589867025241aecafb99 402 PRINTS PR00812 Bacterial general secretion pathway protein F signature 366 380 5.0E-38 T 22-04-2016 IPR003004 GspF/PilC family APT61_RS15215 74827d557d44589867025241aecafb99 402 PANTHER PTHR30012:SF6 2 402 1.3E-191 T 22-04-2016 APT61_RS15215 74827d557d44589867025241aecafb99 402 PANTHER PTHR30012 2 402 1.3E-191 T 22-04-2016 APT61_RS20010 c65aaf42b5882e6fefbe14484fd4db00 52 Pfam PF01848 Hok/gef family 15 47 4.9E-10 T 22-04-2016 IPR000021 Hok/gef cell toxic protein GO:0016020 APT61_RS11525 b1d0451f4a7d685b3c71d8170827b6f2 470 Pfam PF00474 Sodium:solute symporter family 39 380 2.4E-27 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS11525 b1d0451f4a7d685b3c71d8170827b6f2 470 PANTHER PTHR11819 5 441 2.1E-44 T 22-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS01530 b9da64743c2af83da8040c78cf7ff4b1 308 PANTHER PTHR11795:SF371 7 308 5.8E-149 T 22-04-2016 APT61_RS01530 b9da64743c2af83da8040c78cf7ff4b1 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 2.0E-69 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS01530 b9da64743c2af83da8040c78cf7ff4b1 308 PANTHER PTHR11795 7 308 5.8E-149 T 22-04-2016 APT61_RS04035 42ebfc401ed7c8f4bc42f6ecc9090c27 306 PANTHER PTHR11358 10 301 6.2E-109 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 APT61_RS04035 42ebfc401ed7c8f4bc42f6ecc9090c27 306 PANTHER PTHR11358:SF26 10 301 6.2E-109 T 22-04-2016 APT61_RS04035 42ebfc401ed7c8f4bc42f6ecc9090c27 306 Hamap MF_01418 Agmatinase [speB]. 1 304 70.301 T 22-04-2016 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 APT61_RS04035 42ebfc401ed7c8f4bc42f6ecc9090c27 306 Pfam PF00491 Arginase family 34 297 2.9E-86 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 APT61_RS04035 42ebfc401ed7c8f4bc42f6ecc9090c27 306 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 22-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 APT61_RS04035 42ebfc401ed7c8f4bc42f6ecc9090c27 306 Gene3D G3DSA:3.40.800.10 11 302 1.9E-97 T 22-04-2016 IPR023696 Ureohydrolase domain APT61_RS04035 42ebfc401ed7c8f4bc42f6ecc9090c27 306 TIGRFAM TIGR01230 agmatinase: agmatinase 22 299 1.5E-116 T 22-04-2016 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|UniPathway: UPA00534 APT61_RS04035 42ebfc401ed7c8f4bc42f6ecc9090c27 306 PIRSF PIRSF036979 12 304 8.9E-101 T 22-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 APT61_RS04035 42ebfc401ed7c8f4bc42f6ecc9090c27 306 SUPERFAMILY SSF52768 13 301 5.94E-91 T 22-04-2016 APT61_RS10880 adfe309cdb8a26bc628746175f36e358 704 Pfam PF11678 Protein of unknown function (DUF3274) 407 662 4.7E-10 T 22-04-2016 IPR021692 Protein of unknown function DUF3274 APT61_RS10880 adfe309cdb8a26bc628746175f36e358 704 Gene3D G3DSA:3.40.50.1820 103 104 1.3E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS10880 adfe309cdb8a26bc628746175f36e358 704 Gene3D G3DSA:3.40.50.1820 355 407 1.3E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS10880 adfe309cdb8a26bc628746175f36e358 704 Gene3D G3DSA:3.40.50.1820 220 295 1.3E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS10880 adfe309cdb8a26bc628746175f36e358 704 Gene3D G3DSA:3.40.50.1820 44 53 1.3E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS10450 26dc69337f639fd3cc9b7002811cfb24 297 SUPERFAMILY SSF54506 1 296 1.08E-63 T 22-04-2016 APT61_RS10450 26dc69337f639fd3cc9b7002811cfb24 297 Gene3D G3DSA:3.10.310.10 1 120 5.1E-38 T 22-04-2016 APT61_RS10450 26dc69337f639fd3cc9b7002811cfb24 297 Gene3D G3DSA:3.10.310.10 135 286 1.5E-32 T 22-04-2016 APT61_RS10450 26dc69337f639fd3cc9b7002811cfb24 297 Pfam PF02567 Phenazine biosynthesis-like protein 9 293 9.9E-57 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APT61_RS10450 26dc69337f639fd3cc9b7002811cfb24 297 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 297 5.4E-62 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APT61_RS10450 26dc69337f639fd3cc9b7002811cfb24 297 PIRSF PIRSF016184 1 297 2.2E-74 T 22-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- APT61_RS10450 26dc69337f639fd3cc9b7002811cfb24 297 PANTHER PTHR13774:SF15 1 297 3.8E-85 T 22-04-2016 APT61_RS10450 26dc69337f639fd3cc9b7002811cfb24 297 PANTHER PTHR13774 1 297 3.8E-85 T 22-04-2016 APT61_RS05000 c6fd1b3ffbfbd497a1adb6bf97378639 307 PANTHER PTHR11432:SF1 3 307 1.5E-137 T 22-04-2016 APT61_RS05000 c6fd1b3ffbfbd497a1adb6bf97378639 307 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 194 207 - T 22-04-2016 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 APT61_RS05000 c6fd1b3ffbfbd497a1adb6bf97378639 307 Pfam PF00146 NADH dehydrogenase 8 302 1.7E-44 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APT61_RS05000 c6fd1b3ffbfbd497a1adb6bf97378639 307 PANTHER PTHR11432 3 307 1.5E-137 T 22-04-2016 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 APT61_RS12815 6e0739ebf527cf7ca2d54891126fe4e1 262 Gene3D G3DSA:3.20.20.60 7 249 9.9E-72 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS12815 6e0739ebf527cf7ca2d54891126fe4e1 262 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 237 3.9E-39 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 APT61_RS12815 6e0739ebf527cf7ca2d54891126fe4e1 262 PANTHER PTHR30502 1 261 1.1E-78 T 22-04-2016 APT61_RS12815 6e0739ebf527cf7ca2d54891126fe4e1 262 SUPERFAMILY SSF51621 8 250 3.93E-71 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS17745 9065bb97e77bbdef529cd4f68a9682da 342 SUPERFAMILY SSF53474 228 342 8.34E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS17745 9065bb97e77bbdef529cd4f68a9682da 342 SUPERFAMILY SSF53474 28 181 8.34E-45 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS17745 9065bb97e77bbdef529cd4f68a9682da 342 Pfam PF01738 Dienelactone hydrolase family 62 175 1.2E-8 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 APT61_RS17745 9065bb97e77bbdef529cd4f68a9682da 342 Gene3D G3DSA:3.40.50.1820 38 342 1.1E-71 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS17745 9065bb97e77bbdef529cd4f68a9682da 342 PANTHER PTHR17630:SF49 22 342 2.7E-86 T 22-04-2016 APT61_RS17745 9065bb97e77bbdef529cd4f68a9682da 342 PANTHER PTHR17630 22 342 2.7E-86 T 22-04-2016 APT61_RS17865 f7b39bc5c1d6924a2af6cdc79c3efe2a 189 PANTHER PTHR19136:SF78 3 179 3.9E-18 T 22-04-2016 APT61_RS17865 f7b39bc5c1d6924a2af6cdc79c3efe2a 189 PANTHER PTHR19136 3 179 3.9E-18 T 22-04-2016 APT61_RS17865 f7b39bc5c1d6924a2af6cdc79c3efe2a 189 Pfam PF12804 MobA-like NTP transferase domain 8 146 4.4E-24 T 22-04-2016 IPR025877 MobA-like NTP transferase APT61_RS17865 f7b39bc5c1d6924a2af6cdc79c3efe2a 189 SUPERFAMILY SSF53448 7 174 8.57E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS17865 f7b39bc5c1d6924a2af6cdc79c3efe2a 189 Gene3D G3DSA:3.90.550.10 3 179 8.8E-23 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS02875 067188c68748ee50279dd539d68b94b7 167 PANTHER PTHR23091 1 166 1.7E-22 T 22-04-2016 APT61_RS02875 067188c68748ee50279dd539d68b94b7 167 SUPERFAMILY SSF55729 1 161 1.22E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS02875 067188c68748ee50279dd539d68b94b7 167 Pfam PF13508 Acetyltransferase (GNAT) domain 44 124 5.5E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS02875 067188c68748ee50279dd539d68b94b7 167 PANTHER PTHR23091:SF237 1 166 1.7E-22 T 22-04-2016 APT61_RS02875 067188c68748ee50279dd539d68b94b7 167 Gene3D G3DSA:3.40.630.30 16 128 7.8E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS18505 4c192337265a055297df919d45a31d77 465 Gene3D G3DSA:1.20.1250.20 19 214 7.2E-19 T 22-04-2016 APT61_RS18505 4c192337265a055297df919d45a31d77 465 Gene3D G3DSA:1.20.1250.20 227 442 7.9E-11 T 22-04-2016 APT61_RS18505 4c192337265a055297df919d45a31d77 465 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 446 1.5E-126 T 22-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 APT61_RS18505 4c192337265a055297df919d45a31d77 465 Pfam PF13347 MFS/sugar transport protein 13 432 2.6E-106 T 22-04-2016 APT61_RS18505 4c192337265a055297df919d45a31d77 465 PANTHER PTHR11328 1 465 5.9E-179 T 22-04-2016 APT61_RS18505 4c192337265a055297df919d45a31d77 465 SUPERFAMILY SSF103473 11 426 1.83E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS18505 4c192337265a055297df919d45a31d77 465 PANTHER PTHR11328:SF24 1 465 5.9E-179 T 22-04-2016 APT61_RS13060 8892469fcf8fce3bcae152488d0dece4 96 ProDom PD066031 YDIZ CYTOPLASMIC STY1786 1 96 4.0E-25 T 22-04-2016 IPR020499 Uncharacterised protein family YdiZ APT61_RS13060 8892469fcf8fce3bcae152488d0dece4 96 Pfam PF11080 Protein of unknown function (DUF2622) 1 93 5.7E-37 T 22-04-2016 IPR022597 Endoribonuclease GhoS GO:0004521 APT61_RS05810 317c71aa6f72e635c1e2bb0599994ff9 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 4.9E-112 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APT61_RS05810 317c71aa6f72e635c1e2bb0599994ff9 243 PANTHER PTHR30456:SF0 2 242 3.9E-149 T 22-04-2016 APT61_RS05810 317c71aa6f72e635c1e2bb0599994ff9 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 135.345 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APT61_RS05810 317c71aa6f72e635c1e2bb0599994ff9 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 3.4E-106 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APT61_RS05810 317c71aa6f72e635c1e2bb0599994ff9 243 Gene3D G3DSA:3.20.20.70 3 242 4.3E-113 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS05810 317c71aa6f72e635c1e2bb0599994ff9 243 SUPERFAMILY SSF63892 4 242 1.31E-102 T 22-04-2016 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2|UniPathway: UPA00244 APT61_RS05810 317c71aa6f72e635c1e2bb0599994ff9 243 PANTHER PTHR30456 2 242 3.9E-149 T 22-04-2016 APT61_RS18725 2898e75be152fa46a36d6a8da3ab12f3 291 Pfam PF05368 NmrA-like family 5 223 2.4E-28 T 22-04-2016 IPR008030 NmrA-like domain APT61_RS18725 2898e75be152fa46a36d6a8da3ab12f3 291 Gene3D G3DSA:3.40.50.720 2 221 1.6E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS18725 2898e75be152fa46a36d6a8da3ab12f3 291 SUPERFAMILY SSF51735 4 234 4.15E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS18725 2898e75be152fa46a36d6a8da3ab12f3 291 PANTHER PTHR14194 1 290 5.7E-52 T 22-04-2016 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 PANTHER PTHR32108 1 329 1.1E-159 T 22-04-2016 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 9.4E-113 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 Gene3D G3DSA:1.10.150.20 244 328 6.1E-38 T 22-04-2016 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 PANTHER PTHR32108:SF0 1 329 1.1E-159 T 22-04-2016 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF55257 179 231 1.57E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF55257 6 53 1.57E-30 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 Gene3D G3DSA:2.170.120.12 58 177 8.7E-40 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.7E-23 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF56553 53 178 3.31E-41 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.587 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 6.0E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 Gene3D G3DSA:3.30.1360.10 9 57 1.5E-10 T 22-04-2016 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 SMART SM00662 23 234 2.5E-105 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 APT61_RS02180 4db4e244ba50bb188b209700dbad63f2 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 22-04-2016 APT61_RS05500 a795f47501a02c73e62c9a54b735377c 769 Pfam PF15615 TerB-C domain 645 767 1.3E-24 T 22-04-2016 IPR028932 TerB-C domain APT61_RS05500 a795f47501a02c73e62c9a54b735377c 769 Pfam PF13208 TerB N-terminal domain 99 309 9.5E-45 T 22-04-2016 IPR025266 TerB, N-terminal APT61_RS05500 a795f47501a02c73e62c9a54b735377c 769 Pfam PF05099 Tellurite resistance protein TerB 509 623 4.4E-7 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal APT61_RS05500 a795f47501a02c73e62c9a54b735377c 769 SUPERFAMILY SSF158682 512 630 6.41E-18 T 22-04-2016 IPR029024 TerB-like APT61_RS05500 a795f47501a02c73e62c9a54b735377c 769 Gene3D G3DSA:1.10.3680.10 515 632 4.8E-16 T 22-04-2016 IPR029024 TerB-like APT61_RS01925 4b8171e5abc9c209f3e1d5f01c692c17 285 PANTHER PTHR30201 1 285 1.9E-66 T 22-04-2016 APT61_RS01925 4b8171e5abc9c209f3e1d5f01c692c17 285 TIGRFAM TIGR03132 malonate_mdcB: triphosphoribosyl-dephospho-CoA synthase MdcB 14 279 1.4E-91 T 22-04-2016 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 APT61_RS01925 4b8171e5abc9c209f3e1d5f01c692c17 285 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 17 276 6.5E-67 T 22-04-2016 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 APT61_RS01925 4b8171e5abc9c209f3e1d5f01c692c17 285 Hamap MF_01883 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [mdcB]. 1 285 147.548 T 22-04-2016 IPR017555 Triphosphoribosyl-dephospho-CoA synthase GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 APT61_RS19005 3350ccc8fce15d4090345980fb7f3b1e 189 PANTHER PTHR30178 1 188 8.3E-125 T 22-04-2016 APT61_RS19005 3350ccc8fce15d4090345980fb7f3b1e 189 PANTHER PTHR30178:SF6 1 188 8.3E-125 T 22-04-2016 APT61_RS19005 3350ccc8fce15d4090345980fb7f3b1e 189 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 8 17 - T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 APT61_RS19005 3350ccc8fce15d4090345980fb7f3b1e 189 Pfam PF01184 GPR1/FUN34/yaaH family 4 178 1.0E-40 T 22-04-2016 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 APT61_RS01405 5f1783f70ae793e137a9c0231e400ec3 271 PANTHER PTHR10434:SF11 30 210 1.8E-14 T 22-04-2016 APT61_RS01405 5f1783f70ae793e137a9c0231e400ec3 271 SMART SM00563 90 200 1.0E-16 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APT61_RS01405 5f1783f70ae793e137a9c0231e400ec3 271 PANTHER PTHR10434 30 210 1.8E-14 T 22-04-2016 APT61_RS01405 5f1783f70ae793e137a9c0231e400ec3 271 SUPERFAMILY SSF69593 69 258 1.05E-21 T 22-04-2016 APT61_RS01405 5f1783f70ae793e137a9c0231e400ec3 271 Gene3D G3DSA:3.40.1130.10 86 189 2.4E-5 T 22-04-2016 APT61_RS01405 5f1783f70ae793e137a9c0231e400ec3 271 Pfam PF01553 Acyltransferase 78 189 1.2E-13 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 APT61_RS19615 089719e3f96ea1b36c4326f94dc2f715 471 SUPERFAMILY SSF46785 1 70 6.4E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19615 089719e3f96ea1b36c4326f94dc2f715 471 SUPERFAMILY SSF53383 81 465 1.26E-93 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase APT61_RS19615 089719e3f96ea1b36c4326f94dc2f715 471 PANTHER PTHR11751 84 470 1.5E-193 T 22-04-2016 APT61_RS19615 089719e3f96ea1b36c4326f94dc2f715 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 1.5E-14 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS19615 089719e3f96ea1b36c4326f94dc2f715 471 Gene3D G3DSA:1.10.10.10 1 69 4.2E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19615 089719e3f96ea1b36c4326f94dc2f715 471 Gene3D G3DSA:3.90.1150.10 354 465 6.1E-8 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 APT61_RS19615 089719e3f96ea1b36c4326f94dc2f715 471 Pfam PF00155 Aminotransferase class I and II 108 460 1.4E-35 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 APT61_RS19615 089719e3f96ea1b36c4326f94dc2f715 471 PANTHER PTHR11751:SF275 84 470 1.5E-193 T 22-04-2016 APT61_RS19615 089719e3f96ea1b36c4326f94dc2f715 471 Gene3D G3DSA:3.40.640.10 135 353 5.8E-67 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 APT61_RS19615 089719e3f96ea1b36c4326f94dc2f715 471 SMART SM00345 7 66 2.6E-21 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 APT61_RS19290 a2a55cb3fa3c099aa91b405206a7fe8a 763 Gene3D G3DSA:3.40.720.10 163 467 1.8E-21 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APT61_RS19290 a2a55cb3fa3c099aa91b405206a7fe8a 763 PANTHER PTHR10342 513 554 1.1E-85 T 22-04-2016 APT61_RS19290 a2a55cb3fa3c099aa91b405206a7fe8a 763 PANTHER PTHR10342 157 490 1.1E-85 T 22-04-2016 APT61_RS19290 a2a55cb3fa3c099aa91b405206a7fe8a 763 Pfam PF00884 Sulfatase 163 446 2.6E-22 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APT61_RS19290 a2a55cb3fa3c099aa91b405206a7fe8a 763 SUPERFAMILY SSF53649 161 469 1.53E-29 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APT61_RS19290 a2a55cb3fa3c099aa91b405206a7fe8a 763 PANTHER PTHR10342:SF236 513 554 1.1E-85 T 22-04-2016 APT61_RS19290 a2a55cb3fa3c099aa91b405206a7fe8a 763 PANTHER PTHR10342:SF236 157 490 1.1E-85 T 22-04-2016 APT61_RS01495 909883a944466631c91c866e20e3ae25 352 Pfam PF02687 FtsX-like permease family 228 342 9.5E-12 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 APT61_RS01495 909883a944466631c91c866e20e3ae25 352 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 46 351 1.1E-152 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 APT61_RS01495 909883a944466631c91c866e20e3ae25 352 PIRSF PIRSF003097 50 348 8.7E-107 T 22-04-2016 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 APT61_RS09215 48d869d8d070599f8dbfd5275eadc83e 366 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 2 365 1.9E-118 T 22-04-2016 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 APT61_RS09215 48d869d8d070599f8dbfd5275eadc83e 366 PANTHER PTHR37958 5 366 7.2E-129 T 22-04-2016 APT61_RS09215 48d869d8d070599f8dbfd5275eadc83e 366 PANTHER PTHR37958:SF1 5 366 7.2E-129 T 22-04-2016 APT61_RS09215 48d869d8d070599f8dbfd5275eadc83e 366 Pfam PF01699 Sodium/calcium exchanger protein 40 190 7.6E-13 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 APT61_RS09215 48d869d8d070599f8dbfd5275eadc83e 366 Pfam PF01699 Sodium/calcium exchanger protein 223 364 2.5E-8 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 APT61_RS22115 66c478da7e2cc4175b0fafc4e8a876ae 391 PANTHER PTHR23502 1 377 3.6E-217 T 22-04-2016 APT61_RS22115 66c478da7e2cc4175b0fafc4e8a876ae 391 Gene3D G3DSA:1.20.1250.20 5 187 1.7E-31 T 22-04-2016 APT61_RS22115 66c478da7e2cc4175b0fafc4e8a876ae 391 Gene3D G3DSA:1.20.1250.20 209 386 9.8E-13 T 22-04-2016 APT61_RS22115 66c478da7e2cc4175b0fafc4e8a876ae 391 Pfam PF07690 Major Facilitator Superfamily 11 342 7.4E-43 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS22115 66c478da7e2cc4175b0fafc4e8a876ae 391 PANTHER PTHR23502:SF57 1 377 3.6E-217 T 22-04-2016 APT61_RS22115 66c478da7e2cc4175b0fafc4e8a876ae 391 SUPERFAMILY SSF103473 4 381 7.19E-55 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS22170 1fab6f730d6bbc9082feefe57d81fd51 319 SUPERFAMILY SSF161098 27 304 2.75E-33 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS22170 1fab6f730d6bbc9082feefe57d81fd51 319 PANTHER PTHR30425 13 319 1.1E-157 T 22-04-2016 APT61_RS22170 1fab6f730d6bbc9082feefe57d81fd51 319 Gene3D G3DSA:1.10.3720.10 25 316 1.6E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS22170 1fab6f730d6bbc9082feefe57d81fd51 319 PANTHER PTHR30425:SF1 13 319 1.1E-157 T 22-04-2016 APT61_RS22170 1fab6f730d6bbc9082feefe57d81fd51 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 307 7.5E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS22170 1fab6f730d6bbc9082feefe57d81fd51 319 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 17 311 2.9E-93 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 APT61_RS06930 15c64c75e0500dae76c0c6b53e4ea457 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.894 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APT61_RS06930 15c64c75e0500dae76c0c6b53e4ea457 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 2.4E-150 T 22-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APT61_RS06930 15c64c75e0500dae76c0c6b53e4ea457 285 Gene3D G3DSA:1.10.12.10 223 273 6.9E-31 T 22-04-2016 IPR014748 Crontonase, C-terminal APT61_RS06930 15c64c75e0500dae76c0c6b53e4ea457 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 22-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 APT61_RS06930 15c64c75e0500dae76c0c6b53e4ea457 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 32 279 1.2E-81 T 22-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 APT61_RS06930 15c64c75e0500dae76c0c6b53e4ea457 285 PANTHER PTHR11941:SF20 9 278 3.5E-200 T 22-04-2016 APT61_RS06930 15c64c75e0500dae76c0c6b53e4ea457 285 Gene3D G3DSA:3.90.226.10 22 222 1.4E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS06930 15c64c75e0500dae76c0c6b53e4ea457 285 SUPERFAMILY SSF52096 15 280 1.24E-79 T 22-04-2016 IPR029045 ClpP/crotonase-like domain APT61_RS06930 15c64c75e0500dae76c0c6b53e4ea457 285 PANTHER PTHR11941 9 278 3.5E-200 T 22-04-2016 APT61_RS21055 bd6dc06e084b345d75df4a13d9769f0f 285 SMART SM00346 35 125 9.0E-38 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APT61_RS21055 bd6dc06e084b345d75df4a13d9769f0f 285 SUPERFAMILY SSF55781 106 282 3.27E-48 T 22-04-2016 IPR029016 GAF domain-like APT61_RS21055 bd6dc06e084b345d75df4a13d9769f0f 285 Pfam PF01614 Bacterial transcriptional regulator 155 278 3.8E-39 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal APT61_RS21055 bd6dc06e084b345d75df4a13d9769f0f 285 SUPERFAMILY SSF46785 35 108 6.56E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS21055 bd6dc06e084b345d75df4a13d9769f0f 285 Gene3D G3DSA:3.30.450.40 107 282 4.6E-57 T 22-04-2016 IPR029016 GAF domain-like APT61_RS21055 bd6dc06e084b345d75df4a13d9769f0f 285 PANTHER PTHR30136:SF3 11 283 2.1E-114 T 22-04-2016 APT61_RS21055 bd6dc06e084b345d75df4a13d9769f0f 285 PANTHER PTHR30136 11 283 2.1E-114 T 22-04-2016 APT61_RS21055 bd6dc06e084b345d75df4a13d9769f0f 285 Gene3D G3DSA:1.10.10.10 24 96 3.0E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS21055 bd6dc06e084b345d75df4a13d9769f0f 285 Pfam PF09339 IclR helix-turn-helix domain 37 87 4.1E-18 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APT61_RS11055 1ec4e0f5f483ffb4c6701858be190781 316 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 300 3.3E-48 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS11055 1ec4e0f5f483ffb4c6701858be190781 316 PANTHER PTHR11795:SF371 4 315 1.5E-106 T 22-04-2016 APT61_RS11055 1ec4e0f5f483ffb4c6701858be190781 316 PANTHER PTHR11795 4 315 1.5E-106 T 22-04-2016 APT61_RS03480 0f97e135262a19dff7f3c29c7a136adb 156 SUPERFAMILY SSF69287 1 69 5.49E-18 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal APT61_RS03480 0f97e135262a19dff7f3c29c7a136adb 156 Pfam PF02814 UreE urease accessory protein, N-terminal domain 15 64 2.4E-13 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal APT61_RS03480 0f97e135262a19dff7f3c29c7a136adb 156 Gene3D G3DSA:2.60.260.20 1 71 7.0E-35 T 22-04-2016 APT61_RS03480 0f97e135262a19dff7f3c29c7a136adb 156 SMART SM00988 1 64 4.6E-20 T 22-04-2016 IPR004029 UreE urease accessory, N-terminal APT61_RS03480 0f97e135262a19dff7f3c29c7a136adb 156 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 139 23.79 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 APT61_RS03480 0f97e135262a19dff7f3c29c7a136adb 156 SUPERFAMILY SSF69737 72 138 6.8E-20 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 APT61_RS03480 0f97e135262a19dff7f3c29c7a136adb 156 Pfam PF05194 UreE urease accessory protein, C-terminal domain 72 156 2.4E-28 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 APT61_RS03480 0f97e135262a19dff7f3c29c7a136adb 156 PIRSF PIRSF036402 2 154 1.8E-44 T 22-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 APT61_RS03480 0f97e135262a19dff7f3c29c7a136adb 156 Gene3D G3DSA:3.30.70.790 72 142 1.0E-29 T 22-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 1.6E-115 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.75E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 1.75E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 1.75E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 1.75E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.75E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 1.75E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 1.75E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 1.75E-51 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 SUPERFAMILY SSF118215 8 412 9.15E-121 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 PANTHER PTHR11958 1 437 9.0E-258 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 PANTHER PTHR11958:SF26 1 437 9.0E-258 T 22-04-2016 IPR033380 Glutamate-aspartate symport protein GltP/GltT GO:0015293|GO:0015810|GO:0015813|GO:0016021 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 Gene3D G3DSA:1.10.3860.10 3 416 3.0E-128 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS20775 64ddbc5a4d7876d052b27805d48abef7 437 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 22-04-2016 IPR018107 Sodium:dicarboxylate symporter, conserved site Reactome: REACT_15518|Reactome: REACT_19419 APT61_RS12820 dc2ce730eceaa41621899c22b8caba91 388 SUPERFAMILY SSF51182 25 150 2.84E-23 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS12820 dc2ce730eceaa41621899c22b8caba91 388 SUPERFAMILY SSF51182 220 341 2.84E-23 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS12820 dc2ce730eceaa41621899c22b8caba91 388 Gene3D G3DSA:2.60.120.10 63 135 2.4E-8 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS12820 dc2ce730eceaa41621899c22b8caba91 388 Gene3D G3DSA:2.60.120.10 257 335 4.2E-6 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS07155 473ef45ab0ad9ff10a80f9f7a3f598e6 229 SUPERFAMILY SSF48317 10 223 3.27E-27 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS07155 473ef45ab0ad9ff10a80f9f7a3f598e6 229 Pfam PF01569 PAP2 superfamily 135 206 1.9E-7 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS07155 473ef45ab0ad9ff10a80f9f7a3f598e6 229 SMART SM00014 94 210 6.3E-17 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS07155 473ef45ab0ad9ff10a80f9f7a3f598e6 229 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 1 229 40.677 T 22-04-2016 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 UniPathway: UPA00030 APT61_RS07155 473ef45ab0ad9ff10a80f9f7a3f598e6 229 Gene3D G3DSA:1.20.144.10 23 205 1.7E-12 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS05120 672e7b1b3481090ee4ea81538dfd369b 114 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 1.7E-59 T 22-04-2016 IPR018994 Protein of unknown function DUF2002 APT61_RS05120 672e7b1b3481090ee4ea81538dfd369b 114 SUPERFAMILY SSF159894 1 111 3.4E-57 T 22-04-2016 APT61_RS07665 2646845c212d98e54c8650771d46e58d 720 PANTHER PTHR32309 185 720 0.0 T 22-04-2016 APT61_RS07665 2646845c212d98e54c8650771d46e58d 720 PANTHER PTHR32309 1 123 0.0 T 22-04-2016 APT61_RS07665 2646845c212d98e54c8650771d46e58d 720 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 508 711 1.3E-46 T 22-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 APT61_RS07665 2646845c212d98e54c8650771d46e58d 720 Gene3D G3DSA:3.40.50.300 528 705 3.9E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07665 2646845c212d98e54c8650771d46e58d 720 PANTHER PTHR32309:SF17 185 720 0.0 T 22-04-2016 APT61_RS07665 2646845c212d98e54c8650771d46e58d 720 PANTHER PTHR32309:SF17 1 123 0.0 T 22-04-2016 APT61_RS07665 2646845c212d98e54c8650771d46e58d 720 SUPERFAMILY SSF52540 527 707 4.51E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS07665 2646845c212d98e54c8650771d46e58d 720 Pfam PF13807 G-rich domain on putative tyrosine kinase 367 447 3.5E-31 T 22-04-2016 IPR032807 Tyrosine kinase, G-rich domain APT61_RS07665 2646845c212d98e54c8650771d46e58d 720 Pfam PF13614 AAA domain 538 651 3.6E-12 T 22-04-2016 IPR025669 AAA domain APT61_RS07665 2646845c212d98e54c8650771d46e58d 720 Pfam PF02706 Chain length determinant protein 16 252 5.6E-47 T 22-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 APT61_RS07840 7f1ea2fd88c004e915188df26aa984e5 196 PANTHER PTHR21235:SF1 2 196 1.0E-89 T 22-04-2016 APT61_RS07840 7f1ea2fd88c004e915188df26aa984e5 196 Pfam PF00117 Glutamine amidotransferase class-I 42 194 1.8E-17 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 APT61_RS07840 7f1ea2fd88c004e915188df26aa984e5 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 5.4E-73 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APT61_RS07840 7f1ea2fd88c004e915188df26aa984e5 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 72 83 9.7E-5 T 22-04-2016 APT61_RS07840 7f1ea2fd88c004e915188df26aa984e5 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 174 187 9.7E-5 T 22-04-2016 APT61_RS07840 7f1ea2fd88c004e915188df26aa984e5 196 Gene3D G3DSA:3.40.50.880 1 196 9.1E-69 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS07840 7f1ea2fd88c004e915188df26aa984e5 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.098 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APT61_RS07840 7f1ea2fd88c004e915188df26aa984e5 196 PIRSF PIRSF000495 1 196 1.3E-63 T 22-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 APT61_RS07840 7f1ea2fd88c004e915188df26aa984e5 196 SUPERFAMILY SSF52317 3 195 1.51E-52 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like APT61_RS07840 7f1ea2fd88c004e915188df26aa984e5 196 PANTHER PTHR21235 2 196 1.0E-89 T 22-04-2016 APT61_RS15230 4b51ea4599a8b91ce520efe0fbd02960 243 Gene3D G3DSA:2.30.42.10 183 239 3.1E-6 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS15230 4b51ea4599a8b91ce520efe0fbd02960 243 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 47 239 3.1E-35 T 22-04-2016 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 APT61_RS15230 4b51ea4599a8b91ce520efe0fbd02960 243 SUPERFAMILY SSF50156 154 235 1.01E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 APT61_RS15230 4b51ea4599a8b91ce520efe0fbd02960 243 Pfam PF11356 Type II secretion system protein C 50 127 9.9E-9 T 22-04-2016 IPR024961 Type II secretion system protein C, N-terminal APT61_RS20080 1eb9db57e3d2b383fe259e6394225c25 114 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 3.1E-24 T 22-04-2016 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like APT61_RS20080 1eb9db57e3d2b383fe259e6394225c25 114 PANTHER PTHR12510:SF6 1 113 4.8E-66 T 22-04-2016 APT61_RS20080 1eb9db57e3d2b383fe259e6394225c25 114 SUPERFAMILY SSF110857 1 111 4.45E-34 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like APT61_RS20080 1eb9db57e3d2b383fe259e6394225c25 114 PANTHER PTHR12510 1 113 4.8E-66 T 22-04-2016 APT61_RS20080 1eb9db57e3d2b383fe259e6394225c25 114 Gene3D G3DSA:3.10.490.10 1 112 1.9E-39 T 22-04-2016 IPR013024 Butirosin biosynthesis, BtrG-like APT61_RS10030 49ee09a568320aea99338547a8a89cbc 95 Pfam PF06243 Phenylacetic acid degradation B 6 91 1.8E-39 T 22-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 APT61_RS10030 49ee09a568320aea99338547a8a89cbc 95 PIRSF PIRSF030200 1 95 3.6E-44 T 22-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 APT61_RS10030 49ee09a568320aea99338547a8a89cbc 95 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 6 95 2.7E-50 T 22-04-2016 IPR009359 Phenylacetic acid degradation B UniPathway: UPA00930 APT61_RS04935 794514ca9952797687a159e4a4616e63 394 Gene3D G3DSA:1.20.1250.20 218 389 9.8E-11 T 22-04-2016 APT61_RS04935 794514ca9952797687a159e4a4616e63 394 Gene3D G3DSA:1.20.1250.20 12 189 1.3E-23 T 22-04-2016 APT61_RS04935 794514ca9952797687a159e4a4616e63 394 Pfam PF07690 Major Facilitator Superfamily 18 318 7.0E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS04935 794514ca9952797687a159e4a4616e63 394 PANTHER PTHR23501 8 391 1.7E-204 T 22-04-2016 APT61_RS04935 794514ca9952797687a159e4a4616e63 394 SUPERFAMILY SSF103473 10 388 1.96E-53 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS04935 794514ca9952797687a159e4a4616e63 394 PANTHER PTHR23501:SF79 8 391 1.7E-204 T 22-04-2016 APT61_RS00235 7ad7f1c66673866eb573799873d03313 199 Gene3D G3DSA:3.40.50.1000 3 16 5.1E-32 T 22-04-2016 IPR023214 HAD-like domain APT61_RS00235 7ad7f1c66673866eb573799873d03313 199 Gene3D G3DSA:3.40.50.1000 83 195 5.1E-32 T 22-04-2016 IPR023214 HAD-like domain APT61_RS00235 7ad7f1c66673866eb573799873d03313 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 6.2E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS00235 7ad7f1c66673866eb573799873d03313 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 6.2E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS00235 7ad7f1c66673866eb573799873d03313 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 6.2E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS00235 7ad7f1c66673866eb573799873d03313 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 6.2E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS00235 7ad7f1c66673866eb573799873d03313 199 Pfam PF13419 Haloacid dehalogenase-like hydrolase 54 184 5.6E-11 T 22-04-2016 IPR023214 HAD-like domain APT61_RS00235 7ad7f1c66673866eb573799873d03313 199 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 35 184 1.4E-17 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS00235 7ad7f1c66673866eb573799873d03313 199 Gene3D G3DSA:1.10.150.240 17 81 9.1E-35 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APT61_RS00235 7ad7f1c66673866eb573799873d03313 199 PANTHER PTHR12725 4 188 5.7E-48 T 22-04-2016 APT61_RS00235 7ad7f1c66673866eb573799873d03313 199 SUPERFAMILY SSF56784 3 193 6.31E-41 T 22-04-2016 IPR023214 HAD-like domain APT61_RS00235 7ad7f1c66673866eb573799873d03313 199 PANTHER PTHR12725:SF63 4 188 5.7E-48 T 22-04-2016 APT61_RS15225 e0fa82fa72f517875bb0be46cc2b9437 635 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 521 554 - T 22-04-2016 IPR004845 Type II secretion system GspD, conserved site GO:0008565 APT61_RS15225 e0fa82fa72f517875bb0be46cc2b9437 635 PANTHER PTHR30332 13 613 1.4E-235 T 22-04-2016 APT61_RS15225 e0fa82fa72f517875bb0be46cc2b9437 635 PRINTS PR00811 Bacterial general secretion pathway protein D signature 443 453 3.6E-39 T 22-04-2016 IPR001775 GspD/PilQ family APT61_RS15225 e0fa82fa72f517875bb0be46cc2b9437 635 PRINTS PR00811 Bacterial general secretion pathway protein D signature 540 558 3.6E-39 T 22-04-2016 IPR001775 GspD/PilQ family APT61_RS15225 e0fa82fa72f517875bb0be46cc2b9437 635 PRINTS PR00811 Bacterial general secretion pathway protein D signature 408 432 3.6E-39 T 22-04-2016 IPR001775 GspD/PilQ family APT61_RS15225 e0fa82fa72f517875bb0be46cc2b9437 635 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 3.6E-39 T 22-04-2016 IPR001775 GspD/PilQ family APT61_RS15225 e0fa82fa72f517875bb0be46cc2b9437 635 PRINTS PR00811 Bacterial general secretion pathway protein D signature 563 577 3.6E-39 T 22-04-2016 IPR001775 GspD/PilQ family APT61_RS15225 e0fa82fa72f517875bb0be46cc2b9437 635 Pfam PF03958 Bacterial type II/III secretion system short domain 191 260 1.1E-15 T 22-04-2016 IPR005644 NolW-like APT61_RS15225 e0fa82fa72f517875bb0be46cc2b9437 635 Pfam PF03958 Bacterial type II/III secretion system short domain 125 188 3.1E-7 T 22-04-2016 IPR005644 NolW-like APT61_RS15225 e0fa82fa72f517875bb0be46cc2b9437 635 Pfam PF03958 Bacterial type II/III secretion system short domain 265 343 1.3E-18 T 22-04-2016 IPR005644 NolW-like APT61_RS15225 e0fa82fa72f517875bb0be46cc2b9437 635 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 29 581 2.0E-160 T 22-04-2016 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 APT61_RS15225 e0fa82fa72f517875bb0be46cc2b9437 635 Pfam PF00263 Bacterial type II and III secretion system protein 412 575 2.5E-50 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 APT61_RS15225 e0fa82fa72f517875bb0be46cc2b9437 635 PANTHER PTHR30332:SF3 13 613 1.4E-235 T 22-04-2016 APT61_RS13750 3dff1dd8bc391b2b8a772160a764b3a8 60 Pfam PF07358 Protein of unknown function (DUF1482) 5 51 9.6E-17 T 22-04-2016 IPR009954 Protein of unknown function DUF1482 APT61_RS03780 15ae1d049edd02c0b66040aa14ce8d4e 295 PANTHER PTHR17630:SF32 67 295 4.9E-65 T 22-04-2016 APT61_RS03780 15ae1d049edd02c0b66040aa14ce8d4e 295 SUPERFAMILY SSF53474 69 294 1.58E-49 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS03780 15ae1d049edd02c0b66040aa14ce8d4e 295 Gene3D G3DSA:3.40.50.1820 70 293 2.2E-60 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS03780 15ae1d049edd02c0b66040aa14ce8d4e 295 PANTHER PTHR17630 67 295 4.9E-65 T 22-04-2016 APT61_RS03780 15ae1d049edd02c0b66040aa14ce8d4e 295 Pfam PF01738 Dienelactone hydrolase family 85 294 4.9E-51 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 APT61_RS05770 71e6af64f8f1b3b2a6e2be8276f4d2cd 216 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 4.8E-36 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 APT61_RS05770 71e6af64f8f1b3b2a6e2be8276f4d2cd 216 SUPERFAMILY SSF89069 1 66 2.88E-21 T 22-04-2016 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 APT61_RS05770 71e6af64f8f1b3b2a6e2be8276f4d2cd 216 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 186 4.3E-26 T 22-04-2016 IPR005573 Anti sigma-E protein RseA, C-terminal APT61_RS05770 71e6af64f8f1b3b2a6e2be8276f4d2cd 216 PANTHER PTHR38104 1 216 9.4E-84 T 22-04-2016 APT61_RS05770 71e6af64f8f1b3b2a6e2be8276f4d2cd 216 PIRSF PIRSF016938 1 205 5.2E-36 T 22-04-2016 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 APT61_RS19700 da3b363dfaed574da94710a60848ea3f 138 Pfam PF07681 DoxX 16 99 1.1E-13 T 22-04-2016 IPR032808 DoxX family APT61_RS14240 412664244acaf5904ece4e1e56d5455d 129 Pfam PF10627 Curli assembly protein CsgE 27 128 2.1E-32 T 22-04-2016 IPR018900 Curli assembly protein CsgE APT61_RS00300 8424cc704ae64ee26af94ccd65ecf87a 325 Pfam PF04829 Pre-toxin domain with VENN motif 75 123 1.6E-18 T 22-04-2016 IPR006914 VENN motif-containing domain APT61_RS21505 ff19ab335d9eaec7408305ea640bff7b 118 PIRSF PIRSF028770 1 117 2.8E-60 T 22-04-2016 IPR011223 Uncharacterised conserved protein UCP028770 APT61_RS21505 ff19ab335d9eaec7408305ea640bff7b 118 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 9.0E-41 T 22-04-2016 IPR011223 Uncharacterised conserved protein UCP028770 APT61_RS15655 e75b907b5e6f98fc59b078124c77633a 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 48.373 T 22-04-2016 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 APT61_RS15655 e75b907b5e6f98fc59b078124c77633a 167 SUPERFAMILY SSF47240 11 167 2.33E-49 T 22-04-2016 IPR009078 Ferritin-like superfamily APT61_RS15655 e75b907b5e6f98fc59b078124c77633a 167 ProSitePatterns PS00819 Dps protein family signature 2. 77 91 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 APT61_RS15655 e75b907b5e6f98fc59b078124c77633a 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 APT61_RS15655 e75b907b5e6f98fc59b078124c77633a 167 Pfam PF00210 Ferritin-like domain 30 166 9.3E-21 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 APT61_RS15655 e75b907b5e6f98fc59b078124c77633a 167 PANTHER PTHR30295 9 167 1.1E-94 T 22-04-2016 APT61_RS15655 e75b907b5e6f98fc59b078124c77633a 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 3.2E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APT61_RS15655 e75b907b5e6f98fc59b078124c77633a 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 3.2E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APT61_RS15655 e75b907b5e6f98fc59b078124c77633a 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 3.2E-12 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APT61_RS15655 e75b907b5e6f98fc59b078124c77633a 167 PIRSF PIRSF005900 8 167 5.5E-41 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 APT61_RS15655 e75b907b5e6f98fc59b078124c77633a 167 Gene3D G3DSA:1.20.1260.10 3 167 3.7E-52 T 22-04-2016 IPR012347 Ferritin-related APT61_RS15655 e75b907b5e6f98fc59b078124c77633a 167 PANTHER PTHR30295:SF4 9 167 1.1E-94 T 22-04-2016 APT61_RS21565 c07285bac9c2f48c4814ccbefdf811ae 83 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 8.0E-37 T 22-04-2016 IPR011900 Glutaredoxin, GrxC GO:0045454 APT61_RS21565 c07285bac9c2f48c4814ccbefdf811ae 83 SUPERFAMILY SSF52833 1 83 6.66E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS21565 c07285bac9c2f48c4814ccbefdf811ae 83 Gene3D G3DSA:3.40.30.10 1 73 3.4E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS21565 c07285bac9c2f48c4814ccbefdf811ae 83 Pfam PF00462 Glutaredoxin 4 63 1.5E-24 T 22-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 APT61_RS21565 c07285bac9c2f48c4814ccbefdf811ae 83 PRINTS PR00160 Glutaredoxin signature 60 73 9.7E-18 T 22-04-2016 IPR014025 Glutaredoxin subgroup APT61_RS21565 c07285bac9c2f48c4814ccbefdf811ae 83 PRINTS PR00160 Glutaredoxin signature 46 59 9.7E-18 T 22-04-2016 IPR014025 Glutaredoxin subgroup APT61_RS21565 c07285bac9c2f48c4814ccbefdf811ae 83 PRINTS PR00160 Glutaredoxin signature 4 22 9.7E-18 T 22-04-2016 IPR014025 Glutaredoxin subgroup APT61_RS21565 c07285bac9c2f48c4814ccbefdf811ae 83 PANTHER PTHR10168 4 83 6.4E-30 T 22-04-2016 APT61_RS21565 c07285bac9c2f48c4814ccbefdf811ae 83 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 22-04-2016 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 APT61_RS12035 dd00f9b4ef9b065ff75c4ae46227847c 417 Pfam PF07690 Major Facilitator Superfamily 42 261 7.2E-28 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS12035 dd00f9b4ef9b065ff75c4ae46227847c 417 Gene3D G3DSA:1.20.1250.20 37 217 5.9E-32 T 22-04-2016 APT61_RS12035 dd00f9b4ef9b065ff75c4ae46227847c 417 Gene3D G3DSA:1.20.1250.20 237 412 1.6E-16 T 22-04-2016 APT61_RS12035 dd00f9b4ef9b065ff75c4ae46227847c 417 PANTHER PTHR23501 6 415 2.0E-221 T 22-04-2016 APT61_RS12035 dd00f9b4ef9b065ff75c4ae46227847c 417 PANTHER PTHR23501:SF11 6 415 2.0E-221 T 22-04-2016 APT61_RS12035 dd00f9b4ef9b065ff75c4ae46227847c 417 ProSitePatterns PS00216 Sugar transport proteins signature 1. 92 108 - T 22-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 APT61_RS12035 dd00f9b4ef9b065ff75c4ae46227847c 417 SUPERFAMILY SSF103473 24 414 2.22E-63 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS15115 d4417aff48b71f9148076dfecc65427f 552 PANTHER PTHR32182:SF12 1 551 1.2E-298 T 22-04-2016 APT61_RS15115 d4417aff48b71f9148076dfecc65427f 552 SUPERFAMILY SSF52540 1 331 8.46E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15115 d4417aff48b71f9148076dfecc65427f 552 Gene3D G3DSA:3.40.50.300 1 344 1.2E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS15115 d4417aff48b71f9148076dfecc65427f 552 PANTHER PTHR32182 1 551 1.2E-298 T 22-04-2016 APT61_RS15115 d4417aff48b71f9148076dfecc65427f 552 Pfam PF11398 Protein of unknown function (DUF2813) 1 375 4.5E-153 T 22-04-2016 IPR022602 Protein of unknown function DUF2813 APT61_RS13605 c30c2a6428357018205df9a6ec0b7857 136 Pfam PF06894 Bacteriophage lambda tail assembly chaperone, TAC, protein G 3 121 8.6E-24 T 22-04-2016 IPR010027 Bacteriophage lambda, GpG, minor tail APT61_RS13605 c30c2a6428357018205df9a6ec0b7857 136 TIGRFAM TIGR01674 phage_lambda_G: phage minor tail protein G 3 135 6.0E-24 T 22-04-2016 IPR010027 Bacteriophage lambda, GpG, minor tail APT61_RS18560 9f8090625089950fe979aac564f499ad 64 Pfam PF03884 Domain of unknown function (DUF329) 7 57 3.0E-25 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 APT61_RS18560 9f8090625089950fe979aac564f499ad 64 PANTHER PTHR36150 2 63 2.1E-28 T 22-04-2016 APT61_RS18560 9f8090625089950fe979aac564f499ad 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 19.972 T 22-04-2016 IPR005584 DNA gyrase inhibitor YacG GO:0008270 APT61_RS18560 9f8090625089950fe979aac564f499ad 64 Gene3D G3DSA:3.30.50.10 2 63 5.6E-28 T 22-04-2016 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 APT61_RS18560 9f8090625089950fe979aac564f499ad 64 SUPERFAMILY SSF57716 3 62 1.4E-23 T 22-04-2016 APT61_RS18560 9f8090625089950fe979aac564f499ad 64 PANTHER PTHR36150:SF1 2 63 2.1E-28 T 22-04-2016 APT61_RS16475 c94fc6f6b06ccc1e44a7d1f2edd8170b 191 SUPERFAMILY SSF56925 34 191 2.35E-80 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS16475 c94fc6f6b06ccc1e44a7d1f2edd8170b 191 Gene3D G3DSA:2.40.160.20 34 191 4.7E-86 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS16475 c94fc6f6b06ccc1e44a7d1f2edd8170b 191 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 44 188 2.0E-66 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 APT61_RS16475 c94fc6f6b06ccc1e44a7d1f2edd8170b 191 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 38 179 2.0E-71 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 APT61_RS16475 c94fc6f6b06ccc1e44a7d1f2edd8170b 191 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 4 191 42.405 T 22-04-2016 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 APT61_RS09955 2e112fa74acc0346064a4fa60072f178 70 Pfam PF13619 KTSC domain 7 64 9.7E-19 T 22-04-2016 IPR025309 KTSC domain APT61_RS11595 5bea51dee67978a6b39b7d6bad3f2367 159 Gene3D G3DSA:2.30.110.20 1 153 1.9E-23 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS11595 5bea51dee67978a6b39b7d6bad3f2367 159 PANTHER PTHR34319:SF2 1 159 4.1E-46 T 22-04-2016 APT61_RS11595 5bea51dee67978a6b39b7d6bad3f2367 159 Pfam PF05638 Type VI secretion system effector, Hcp 14 142 1.8E-27 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS11595 5bea51dee67978a6b39b7d6bad3f2367 159 SUPERFAMILY SSF141452 4 157 3.4E-34 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS11595 5bea51dee67978a6b39b7d6bad3f2367 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 155 1.7E-34 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS11595 5bea51dee67978a6b39b7d6bad3f2367 159 PANTHER PTHR34319 1 159 4.1E-46 T 22-04-2016 APT61_RS08565 661c13760438a80e46e0485b0bfad723 173 SUPERFAMILY SSF53098 3 156 3.54E-57 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS08565 661c13760438a80e46e0485b0bfad723 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 1.4E-67 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APT61_RS08565 661c13760438a80e46e0485b0bfad723 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 22-04-2016 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 APT61_RS08565 661c13760438a80e46e0485b0bfad723 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.581 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APT61_RS08565 661c13760438a80e46e0485b0bfad723 173 Gene3D G3DSA:3.30.420.10 3 156 6.6E-68 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 APT61_RS08565 661c13760438a80e46e0485b0bfad723 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.9E-44 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APT61_RS08565 661c13760438a80e46e0485b0bfad723 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.9E-44 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APT61_RS08565 661c13760438a80e46e0485b0bfad723 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.9E-44 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APT61_RS08565 661c13760438a80e46e0485b0bfad723 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.9E-44 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APT61_RS08565 661c13760438a80e46e0485b0bfad723 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.9E-44 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APT61_RS08565 661c13760438a80e46e0485b0bfad723 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 159 2.4E-85 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 APT61_RS08565 661c13760438a80e46e0485b0bfad723 173 PANTHER PTHR30194 1 169 1.4E-73 T 22-04-2016 APT61_RS01240 a4c57ff309d9265f556dd22f9acf43f1 175 Gene3D G3DSA:3.40.630.30 1 175 1.7E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS01240 a4c57ff309d9265f556dd22f9acf43f1 175 PANTHER PTHR13256 3 175 5.1E-33 T 22-04-2016 APT61_RS01240 a4c57ff309d9265f556dd22f9acf43f1 175 Pfam PF13302 Acetyltransferase (GNAT) domain 8 145 6.0E-26 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS01240 a4c57ff309d9265f556dd22f9acf43f1 175 SUPERFAMILY SSF55729 1 171 7.98E-43 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS12245 d532b0e777ecac82e2b4d3de2923cb6f 553 Gene3D G3DSA:2.60.120.200 508 552 3.6E-4 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain APT61_RS22145 60d930c68199c53cfbd1d7590e585a1d 386 PANTHER PTHR10907:SF33 57 301 3.5E-69 T 22-04-2016 APT61_RS22145 60d930c68199c53cfbd1d7590e585a1d 386 Pfam PF00756 Putative esterase 147 375 6.8E-19 T 22-04-2016 IPR000801 Putative esterase APT61_RS22145 60d930c68199c53cfbd1d7590e585a1d 386 Gene3D G3DSA:3.40.50.1820 136 386 1.2E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS22145 60d930c68199c53cfbd1d7590e585a1d 386 SUPERFAMILY SSF53474 132 386 6.16E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS22145 60d930c68199c53cfbd1d7590e585a1d 386 Gene3D G3DSA:2.60.40.10 39 102 1.9E-8 T 22-04-2016 IPR013783 Immunoglobulin-like fold APT61_RS22145 60d930c68199c53cfbd1d7590e585a1d 386 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 40 100 2.7E-7 T 22-04-2016 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 APT61_RS22145 60d930c68199c53cfbd1d7590e585a1d 386 PANTHER PTHR10907 57 301 3.5E-69 T 22-04-2016 APT61_RS22145 60d930c68199c53cfbd1d7590e585a1d 386 SUPERFAMILY SSF81296 40 106 4.55E-9 T 22-04-2016 IPR014756 Immunoglobulin E-set APT61_RS13600 52cc6c5ee9237db36f45c90424c16b9f 102 TIGRFAM TIGR01715 phage_lam_T: phage tail assembly protein T 1 99 2.1E-34 T 22-04-2016 IPR009350 Minor tail T APT61_RS13600 52cc6c5ee9237db36f45c90424c16b9f 102 Pfam PF06223 Minor tail protein T 2 99 4.3E-33 T 22-04-2016 IPR009350 Minor tail T APT61_RS01040 a7f29c1328ce6af20a3c0b2287566f1e 299 Pfam PF00892 EamA-like transporter family 139 274 6.3E-11 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS01040 a7f29c1328ce6af20a3c0b2287566f1e 299 Pfam PF00892 EamA-like transporter family 2 129 2.6E-10 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS01040 a7f29c1328ce6af20a3c0b2287566f1e 299 SUPERFAMILY SSF103481 198 278 3.4E-8 T 22-04-2016 APT61_RS01040 a7f29c1328ce6af20a3c0b2287566f1e 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 3.7E-88 T 22-04-2016 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 APT61_RS01040 a7f29c1328ce6af20a3c0b2287566f1e 299 PANTHER PTHR22911:SF27 3 294 7.3E-92 T 22-04-2016 APT61_RS01040 a7f29c1328ce6af20a3c0b2287566f1e 299 PANTHER PTHR22911 3 294 7.3E-92 T 22-04-2016 APT61_RS01040 a7f29c1328ce6af20a3c0b2287566f1e 299 SUPERFAMILY SSF103481 35 131 9.68E-9 T 22-04-2016 APT61_RS01055 d14e287cad3c0dd11c507a2272fb6b64 267 Gene3D G3DSA:3.40.50.1820 29 262 2.0E-70 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS01055 d14e287cad3c0dd11c507a2272fb6b64 267 SUPERFAMILY SSF53474 30 262 8.56E-48 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS01055 d14e287cad3c0dd11c507a2272fb6b64 267 PANTHER PTHR17630:SF42 24 263 1.3E-110 T 22-04-2016 APT61_RS01055 d14e287cad3c0dd11c507a2272fb6b64 267 PANTHER PTHR17630 24 263 1.3E-110 T 22-04-2016 APT61_RS01055 d14e287cad3c0dd11c507a2272fb6b64 267 Pfam PF01738 Dienelactone hydrolase family 40 263 5.0E-73 T 22-04-2016 IPR002925 Dienelactone hydrolase GO:0016787 APT61_RS08145 0e711f8b08a670267cb374983c22eea6 471 PANTHER PTHR30288 1 471 4.2E-64 T 22-04-2016 APT61_RS08145 0e711f8b08a670267cb374983c22eea6 471 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 221 458 3.0E-57 T 22-04-2016 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 APT61_RS08145 0e711f8b08a670267cb374983c22eea6 471 PANTHER PTHR30288:SF0 1 471 4.2E-64 T 22-04-2016 APT61_RS08145 0e711f8b08a670267cb374983c22eea6 471 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 15 105 1.0E-16 T 22-04-2016 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 APT61_RS21475 f5d371e47e8abca048585ed2a73a9d4e 512 Gene3D G3DSA:3.40.605.10 23 298 2.0E-100 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 APT61_RS21475 f5d371e47e8abca048585ed2a73a9d4e 512 Gene3D G3DSA:3.40.309.10 299 476 2.7E-57 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 APT61_RS21475 f5d371e47e8abca048585ed2a73a9d4e 512 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 300 311 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 APT61_RS21475 f5d371e47e8abca048585ed2a73a9d4e 512 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 267 274 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 APT61_RS21475 f5d371e47e8abca048585ed2a73a9d4e 512 SUPERFAMILY SSF53720 21 504 2.62E-161 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 APT61_RS21475 f5d371e47e8abca048585ed2a73a9d4e 512 PANTHER PTHR11699:SF97 3 512 0.0 T 22-04-2016 APT61_RS21475 f5d371e47e8abca048585ed2a73a9d4e 512 Pfam PF00171 Aldehyde dehydrogenase family 33 498 1.5E-164 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 APT61_RS21475 f5d371e47e8abca048585ed2a73a9d4e 512 PANTHER PTHR11699 3 512 0.0 T 22-04-2016 APT61_RS16480 f9e31f47d7dce80c6fe94ebf744b2baf 457 PANTHER PTHR42002 2 456 0.0 T 22-04-2016 APT61_RS16480 f9e31f47d7dce80c6fe94ebf744b2baf 457 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 58 441 1.7E-189 T 22-04-2016 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 APT61_RS16480 f9e31f47d7dce80c6fe94ebf744b2baf 457 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 451 3.1E-133 T 22-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 APT61_RS16480 f9e31f47d7dce80c6fe94ebf744b2baf 457 PANTHER PTHR42002:SF2 2 456 0.0 T 22-04-2016 APT61_RS10395 cf1f81e22f592b6ffdb20870d69f089c 156 Gene3D G3DSA:3.30.300.20 7 133 1.6E-22 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APT61_RS10395 cf1f81e22f592b6ffdb20870d69f089c 156 SUPERFAMILY SSF82784 7 150 2.49E-19 T 22-04-2016 IPR003718 OsmC/Ohr family APT61_RS10395 cf1f81e22f592b6ffdb20870d69f089c 156 Pfam PF02566 OsmC-like protein 47 150 5.1E-8 T 22-04-2016 IPR003718 OsmC/Ohr family APT61_RS05860 6d355533e1e6e2b4b99e00e876c554e3 252 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 32 228 1.0E-64 T 22-04-2016 APT61_RS05860 6d355533e1e6e2b4b99e00e876c554e3 252 Pfam PF13942 YfhG lipoprotein 55 228 4.9E-75 T 22-04-2016 IPR025262 Quorum-sensing regulator protein G APT61_RS07025 9f3b5f131e9862ecc8418f7e9eb529ee 351 PANTHER PTHR30040:SF3 1 350 3.4E-171 T 22-04-2016 APT61_RS07025 9f3b5f131e9862ecc8418f7e9eb529ee 351 Pfam PF02424 ApbE family 42 325 4.5E-78 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APT61_RS07025 9f3b5f131e9862ecc8418f7e9eb529ee 351 PIRSF PIRSF006268 3 348 6.9E-89 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 APT61_RS07025 9f3b5f131e9862ecc8418f7e9eb529ee 351 PANTHER PTHR30040 1 350 3.4E-171 T 22-04-2016 APT61_RS07025 9f3b5f131e9862ecc8418f7e9eb529ee 351 SUPERFAMILY SSF143631 36 346 1.2E-93 T 22-04-2016 IPR003374 ApbE-like domain APT61_RS16895 aa1e508287cb1b0f1d80176949738c4f 380 Gene3D G3DSA:3.30.360.10 142 280 6.2E-36 T 22-04-2016 APT61_RS16895 aa1e508287cb1b0f1d80176949738c4f 380 Gene3D G3DSA:3.30.360.10 326 378 6.2E-36 T 22-04-2016 APT61_RS16895 aa1e508287cb1b0f1d80176949738c4f 380 SUPERFAMILY SSF51735 2 153 9.41E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS16895 aa1e508287cb1b0f1d80176949738c4f 380 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 268 3.9E-7 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APT61_RS16895 aa1e508287cb1b0f1d80176949738c4f 380 Gene3D G3DSA:3.40.50.720 1 141 1.3E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS16895 aa1e508287cb1b0f1d80176949738c4f 380 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 5.3E-28 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APT61_RS16895 aa1e508287cb1b0f1d80176949738c4f 380 SUPERFAMILY SSF55347 128 326 1.8E-33 T 22-04-2016 APT61_RS16895 aa1e508287cb1b0f1d80176949738c4f 380 PANTHER PTHR22604 1 208 2.1E-77 T 22-04-2016 APT61_RS16895 aa1e508287cb1b0f1d80176949738c4f 380 PANTHER PTHR22604 229 378 2.1E-77 T 22-04-2016 APT61_RS12540 08b04ebe52eca83cc7a192a66fe7dc17 146 Pfam PF10754 Protein of unknown function (DUF2569) 7 144 4.7E-42 T 22-04-2016 IPR019690 Protein of unknown function DUF2569 APT61_RS05125 0bba676b420c406e83409e976ba00f38 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 8 141 1.0E-65 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 APT61_RS05125 0bba676b420c406e83409e976ba00f38 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 144 34.594 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 APT61_RS05125 0bba676b420c406e83409e976ba00f38 149 Pfam PF06610 L-alanine exporter 4 141 1.2E-69 T 22-04-2016 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 APT61_RS15430 d5d3390af0b6ee1f7469c804816ffac8 242 SUPERFAMILY SSF48317 28 233 1.02E-10 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS15430 d5d3390af0b6ee1f7469c804816ffac8 242 Pfam PF01569 PAP2 superfamily 108 232 1.4E-10 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS15430 d5d3390af0b6ee1f7469c804816ffac8 242 Gene3D G3DSA:1.20.144.10 70 215 6.4E-9 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase APT61_RS11030 9bdd25c5be071f3a46a91b797002e03f 160 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 13 153 1.0E-41 T 22-04-2016 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase APT61_RS06115 e2ece9ebd2b76b08fdff371d552f869d 68 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 1 56 6.0E-21 T 22-04-2016 IPR022576 Protein of unknown function DUF2633 APT61_RS06115 e2ece9ebd2b76b08fdff371d552f869d 68 Pfam PF11119 Protein of unknown function (DUF2633) 9 57 7.7E-28 T 22-04-2016 IPR022576 Protein of unknown function DUF2633 APT61_RS02085 5aeae9e3ab06271f97647e6cf172c357 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02085 5aeae9e3ab06271f97647e6cf172c357 110 Gene3D G3DSA:3.90.470.10 1 109 2.4E-43 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APT61_RS02085 5aeae9e3ab06271f97647e6cf172c357 110 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 5.8E-34 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APT61_RS02085 5aeae9e3ab06271f97647e6cf172c357 110 SUPERFAMILY SSF54843 1 109 6.28E-43 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 APT61_RS02085 5aeae9e3ab06271f97647e6cf172c357 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 5.0E-51 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APT61_RS02085 5aeae9e3ab06271f97647e6cf172c357 110 PANTHER PTHR13501 1 109 4.4E-54 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APT61_RS02085 5aeae9e3ab06271f97647e6cf172c357 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.012 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 APT61_RS02420 50122d1708c4e53d5762aeee250287c0 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 1.2E-69 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APT61_RS02420 50122d1708c4e53d5762aeee250287c0 197 Gene3D G3DSA:3.90.950.10 2 185 1.5E-71 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APT61_RS02420 50122d1708c4e53d5762aeee250287c0 197 Pfam PF02545 Maf-like protein 4 184 5.0E-59 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APT61_RS02420 50122d1708c4e53d5762aeee250287c0 197 PANTHER PTHR11746 119 186 1.3E-18 T 22-04-2016 APT61_RS02420 50122d1708c4e53d5762aeee250287c0 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 32.622 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APT61_RS02420 50122d1708c4e53d5762aeee250287c0 197 PIRSF PIRSF006305 1 191 2.7E-54 T 22-04-2016 IPR003697 Maf-like protein GO:0005737 APT61_RS02420 50122d1708c4e53d5762aeee250287c0 197 SUPERFAMILY SSF52972 2 184 7.85E-63 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like APT61_RS01900 8819d3c15a26e53dd32fd097c73f008a 134 Pfam PF02566 OsmC-like protein 30 127 4.4E-19 T 22-04-2016 IPR003718 OsmC/Ohr family APT61_RS01900 8819d3c15a26e53dd32fd097c73f008a 134 Gene3D G3DSA:3.30.300.20 35 132 8.0E-43 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta APT61_RS01900 8819d3c15a26e53dd32fd097c73f008a 134 Gene3D G3DSA:2.20.25.10 1 34 2.7E-19 T 22-04-2016 APT61_RS01900 8819d3c15a26e53dd32fd097c73f008a 134 PANTHER PTHR34352 1 134 8.5E-55 T 22-04-2016 APT61_RS01900 8819d3c15a26e53dd32fd097c73f008a 134 SUPERFAMILY SSF82784 1 133 2.62E-42 T 22-04-2016 IPR003718 OsmC/Ohr family APT61_RS10955 0b7feeb7207ae30195f5ce62434835e3 191 Gene3D G3DSA:2.30.110.10 2 185 3.1E-45 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS10955 0b7feeb7207ae30195f5ce62434835e3 191 SMART SM00903 14 158 2.3E-18 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APT61_RS10955 0b7feeb7207ae30195f5ce62434835e3 191 PANTHER PTHR30466 4 186 3.9E-49 T 22-04-2016 APT61_RS10955 0b7feeb7207ae30195f5ce62434835e3 191 SUPERFAMILY SSF50475 2 186 9.32E-39 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 APT61_RS10955 0b7feeb7207ae30195f5ce62434835e3 191 PANTHER PTHR30466:SF6 4 186 3.9E-49 T 22-04-2016 APT61_RS10955 0b7feeb7207ae30195f5ce62434835e3 191 Pfam PF01613 Flavin reductase like domain 19 154 2.2E-14 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 APT61_RS08435 8e01cd880ec53dfbeea39775638c9d40 167 SMART SM00972 106 164 1.4E-10 T 22-04-2016 IPR007893 Spore coat protein U APT61_RS08435 8e01cd880ec53dfbeea39775638c9d40 167 Pfam PF05229 Spore Coat Protein U domain 22 164 2.5E-26 T 22-04-2016 IPR007893 Spore coat protein U APT61_RS08435 8e01cd880ec53dfbeea39775638c9d40 167 PANTHER PTHR37089 9 167 2.6E-15 T 22-04-2016 APT61_RS11070 408f5f4059f57b8f366f2c8d92aff58e 216 Pfam PF11153 Protein of unknown function (DUF2931) 5 214 1.4E-41 T 22-04-2016 IPR021326 Protein of unknown function DUF2931 APT61_RS20920 e8219d57d32205f223c9372b2cbe8bf7 436 Gene3D G3DSA:2.40.128.130 220 310 2.9E-6 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS20920 e8219d57d32205f223c9372b2cbe8bf7 436 SUPERFAMILY SSF103515 253 406 7.85E-8 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS20920 e8219d57d32205f223c9372b2cbe8bf7 436 Pfam PF13729 F plasmid transfer operon, TraF, protein 51 354 1.2E-78 T 22-04-2016 IPR032811 Putative conjugal transfer protein TraF-related APT61_RS13075 23871faa708bd606cd2079f0371932a4 222 PANTHER PTHR18901 1 215 8.9E-72 T 22-04-2016 APT61_RS13075 23871faa708bd606cd2079f0371932a4 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 191 4.8E-21 T 22-04-2016 IPR023214 HAD-like domain APT61_RS13075 23871faa708bd606cd2079f0371932a4 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 191 3.4E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS13075 23871faa708bd606cd2079f0371932a4 222 Gene3D G3DSA:3.40.50.1000 2 20 4.8E-37 T 22-04-2016 IPR023214 HAD-like domain APT61_RS13075 23871faa708bd606cd2079f0371932a4 222 Gene3D G3DSA:3.40.50.1000 95 216 4.8E-37 T 22-04-2016 IPR023214 HAD-like domain APT61_RS13075 23871faa708bd606cd2079f0371932a4 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 2.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS13075 23871faa708bd606cd2079f0371932a4 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 2.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS13075 23871faa708bd606cd2079f0371932a4 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 2.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS13075 23871faa708bd606cd2079f0371932a4 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 153 173 2.7E-7 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 APT61_RS13075 23871faa708bd606cd2079f0371932a4 222 Gene3D G3DSA:1.10.150.240 21 91 2.7E-36 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 APT61_RS13075 23871faa708bd606cd2079f0371932a4 222 PANTHER PTHR18901:SF34 1 215 8.9E-72 T 22-04-2016 APT61_RS13075 23871faa708bd606cd2079f0371932a4 222 SUPERFAMILY SSF56784 7 215 1.32E-47 T 22-04-2016 IPR023214 HAD-like domain APT61_RS15905 3c33eb926b713de2fe5c3152808a6954 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 2.2E-65 T 22-04-2016 IPR000150 Cof protein GO:0016787 APT61_RS15905 3c33eb926b713de2fe5c3152808a6954 272 SUPERFAMILY SSF56784 2 271 1.42E-63 T 22-04-2016 IPR023214 HAD-like domain APT61_RS15905 3c33eb926b713de2fe5c3152808a6954 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 22-04-2016 APT61_RS15905 3c33eb926b713de2fe5c3152808a6954 272 PANTHER PTHR10000 1 272 9.7E-79 T 22-04-2016 APT61_RS15905 3c33eb926b713de2fe5c3152808a6954 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 240 3.5E-20 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 APT61_RS15905 3c33eb926b713de2fe5c3152808a6954 272 Gene3D G3DSA:3.40.50.1000 176 271 5.4E-49 T 22-04-2016 IPR023214 HAD-like domain APT61_RS15905 3c33eb926b713de2fe5c3152808a6954 272 Gene3D G3DSA:3.40.50.1000 1 73 5.4E-49 T 22-04-2016 IPR023214 HAD-like domain APT61_RS15905 3c33eb926b713de2fe5c3152808a6954 272 PANTHER PTHR10000:SF8 1 272 9.7E-79 T 22-04-2016 APT61_RS15905 3c33eb926b713de2fe5c3152808a6954 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 22-04-2016 IPR000150 Cof protein GO:0016787 APT61_RS15905 3c33eb926b713de2fe5c3152808a6954 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 1.1E-62 T 22-04-2016 IPR023214 HAD-like domain APT61_RS16560 94edb25ce0f8694f4c134970fd7e8ee1 354 Gene3D G3DSA:3.40.50.2300 34 158 2.3E-22 T 22-04-2016 APT61_RS16560 94edb25ce0f8694f4c134970fd7e8ee1 354 SUPERFAMILY SSF53822 38 308 1.18E-43 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS16560 94edb25ce0f8694f4c134970fd7e8ee1 354 Gene3D G3DSA:3.40.50.2300 159 291 3.0E-19 T 22-04-2016 APT61_RS16560 94edb25ce0f8694f4c134970fd7e8ee1 354 Pfam PF13407 Periplasmic binding protein domain 49 298 2.4E-28 T 22-04-2016 IPR025997 Periplasmic binding protein APT61_RS13660 f93c94f2f643c8154ae794d5521c15ee 113 PIRSF PIRSF030771 1 113 3.2E-17 T 22-04-2016 IPR011231 Bacteriophage VT1-Sakai, H0018 APT61_RS13660 f93c94f2f643c8154ae794d5521c15ee 113 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 3 111 2.6E-22 T 22-04-2016 IPR011231 Bacteriophage VT1-Sakai, H0018 APT61_RS14945 d4ed05252633610b817962db58d3b4fd 582 SUPERFAMILY SSF52540 332 580 1.92E-96 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14945 d4ed05252633610b817962db58d3b4fd 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 2.8E-271 T 22-04-2016 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 APT61_RS14945 d4ed05252633610b817962db58d3b4fd 582 PANTHER PTHR24221 3 581 0.0 T 22-04-2016 APT61_RS14945 d4ed05252633610b817962db58d3b4fd 582 Gene3D G3DSA:3.40.50.300 342 574 7.4E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS14945 d4ed05252633610b817962db58d3b4fd 582 SUPERFAMILY SSF90123 8 325 2.88E-75 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS14945 d4ed05252633610b817962db58d3b4fd 582 Gene3D G3DSA:1.20.1560.10 13 325 6.4E-71 T 22-04-2016 APT61_RS14945 d4ed05252633610b817962db58d3b4fd 582 Pfam PF00664 ABC transporter transmembrane region 27 297 1.6E-60 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 APT61_RS14945 d4ed05252633610b817962db58d3b4fd 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS14945 d4ed05252633610b817962db58d3b4fd 582 Pfam PF00005 ABC transporter 359 509 5.7E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS14945 d4ed05252633610b817962db58d3b4fd 582 SMART SM00382 368 541 2.7E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS14945 d4ed05252633610b817962db58d3b4fd 582 PANTHER PTHR24221:SF188 3 581 0.0 T 22-04-2016 APT61_RS05155 12f29418bbcd4ca5b5dd8d25688bf202 471 Gene3D G3DSA:3.90.1700.10 304 469 6.2E-78 T 22-04-2016 APT61_RS05155 12f29418bbcd4ca5b5dd8d25688bf202 471 Gene3D G3DSA:3.90.1710.10 155 302 8.2E-74 T 22-04-2016 APT61_RS05155 12f29418bbcd4ca5b5dd8d25688bf202 471 Pfam PF06545 Protein of unknown function (DUF1116) 142 356 1.8E-90 T 22-04-2016 IPR009499 Protein of unknown function DUF1116 APT61_RS05155 12f29418bbcd4ca5b5dd8d25688bf202 471 Gene3D G3DSA:1.10.10.660 94 154 1.4E-35 T 22-04-2016 IPR024033 Uncharacterised domain, YlbE APT61_RS16165 3dc94a5ad5352691f0c55b9920186031 218 Gene3D G3DSA:2.40.100.10 88 212 7.8E-53 T 22-04-2016 IPR029000 Cyclophilin-like domain APT61_RS16165 3dc94a5ad5352691f0c55b9920186031 218 Gene3D G3DSA:3.30.1360.40 5 79 3.2E-9 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain APT61_RS16165 3dc94a5ad5352691f0c55b9920186031 218 SMART SM00796 4 202 4.8E-96 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D APT61_RS16165 3dc94a5ad5352691f0c55b9920186031 218 SUPERFAMILY SSF160467 5 93 1.7E-9 T 22-04-2016 APT61_RS16165 3dc94a5ad5352691f0c55b9920186031 218 PANTHER PTHR34698 2 215 1.2E-95 T 22-04-2016 APT61_RS16165 3dc94a5ad5352691f0c55b9920186031 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 1.5E-98 T 22-04-2016 IPR010016 KipI family APT61_RS16165 3dc94a5ad5352691f0c55b9920186031 218 PANTHER PTHR34698:SF2 2 215 1.2E-95 T 22-04-2016 APT61_RS16165 3dc94a5ad5352691f0c55b9920186031 218 SUPERFAMILY SSF50891 89 214 1.33E-46 T 22-04-2016 IPR029000 Cyclophilin-like domain APT61_RS16165 3dc94a5ad5352691f0c55b9920186031 218 Pfam PF02682 Allophanate hydrolase subunit 1 6 202 4.8E-71 T 22-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D APT61_RS11990 c70eab51b03f344e10ed8453218ef641 248 Pfam PF06912 Protein of unknown function (DUF1275) 17 228 4.0E-27 T 22-04-2016 IPR010699 Protein of unknown function DUF1275 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 22-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 Gene3D G3DSA:1.20.210.10 40 589 6.2E-189 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 646 0.0 T 22-04-2016 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 1.4E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 1.4E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 1.4E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 1.4E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 1.4E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 1.4E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 1.4E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 1.4E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 1.4E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 1.4E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 1.4E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 1.4E-94 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 SUPERFAMILY SSF81442 43 560 5.63E-178 T 22-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 1.9E-136 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 PANTHER PTHR10422:SF26 33 614 0.0 T 22-04-2016 APT61_RS17350 2efc9b70716f8bb6bc736c7793db463e 663 PANTHER PTHR10422 33 614 0.0 T 22-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 APT61_RS04850 da7a943bcdfc4d60951ceea277fee83e 165 SUPERFAMILY SSF142433 3 161 6.41E-59 T 22-04-2016 IPR008136 CinA, C-terminal APT61_RS04850 da7a943bcdfc4d60951ceea277fee83e 165 PANTHER PTHR13939 5 161 3.9E-82 T 22-04-2016 APT61_RS04850 da7a943bcdfc4d60951ceea277fee83e 165 Gene3D G3DSA:3.90.950.20 3 163 1.8E-61 T 22-04-2016 IPR008136 CinA, C-terminal APT61_RS04850 da7a943bcdfc4d60951ceea277fee83e 165 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 13 158 1.4E-61 T 22-04-2016 IPR008136 CinA, C-terminal APT61_RS04850 da7a943bcdfc4d60951ceea277fee83e 165 Pfam PF02464 Competence-damaged protein 8 160 7.7E-60 T 22-04-2016 IPR008136 CinA, C-terminal APT61_RS14400 fc3e0e0a499187a824285bc60d64b71d 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 84 97 3.9E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS14400 fc3e0e0a499187a824285bc60d64b71d 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 3.9E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS14400 fc3e0e0a499187a824285bc60d64b71d 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 201 215 3.9E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS14400 fc3e0e0a499187a824285bc60d64b71d 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 3.9E-6 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS14400 fc3e0e0a499187a824285bc60d64b71d 270 Hamap MF_00832 Putative aminoacrylate hydrolase RutD [rutD]. 1 258 50.136 T 22-04-2016 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 APT61_RS14400 fc3e0e0a499187a824285bc60d64b71d 270 PANTHER PTHR10992 14 257 2.0E-39 T 22-04-2016 APT61_RS14400 fc3e0e0a499187a824285bc60d64b71d 270 SUPERFAMILY SSF53474 11 253 1.4E-51 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS14400 fc3e0e0a499187a824285bc60d64b71d 270 Pfam PF00561 alpha/beta hydrolase fold 14 119 7.7E-17 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS14400 fc3e0e0a499187a824285bc60d64b71d 270 TIGRFAM TIGR03611 RutD: pyrimidine utilization protein D 1 257 1.8E-112 T 22-04-2016 IPR019913 Pyrimidine utilisation protein RutD GO:0006212|GO:0016811 APT61_RS14400 fc3e0e0a499187a824285bc60d64b71d 270 Gene3D G3DSA:3.40.50.1820 12 253 5.8E-50 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS14435 315d70e6a1274680f2eaa809f72febaf 75 Pfam PF13993 YccJ-like protein 9 75 4.3E-38 T 22-04-2016 IPR025600 YccJ-like protein APT61_RS03270 5f4ee813e38b39c8f4344478aa81a7a3 797 ProDom PD092055 ENDONUCLEASE POSSIBLE PROPHAGE FOR ORFE TRANSPOSABLE FELS-2 RETRON STY4635 ELEMENT 656 795 5.0E-50 T 22-04-2016 IPR020220 Retron, EC67, C-terminal GO:0016788 APT61_RS03270 5f4ee813e38b39c8f4344478aa81a7a3 797 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 189 562 2.3E-146 T 22-04-2016 IPR008766 Replication gene A protein GO:0006260 APT61_RS11205 ba3e6f48bd157135538df0e9713733e4 71 Pfam PF10684 Putative biofilm-dependent modulation protein 1 71 8.5E-44 T 22-04-2016 IPR019625 Biofilm-dependent modulation protein Bdm, putative APT61_RS10175 55cc63417cc57936e4f41d475019f327 550 Gene3D G3DSA:1.20.1250.20 33 226 2.4E-10 T 22-04-2016 APT61_RS10175 55cc63417cc57936e4f41d475019f327 550 Gene3D G3DSA:1.20.1250.20 509 530 7.8E-5 T 22-04-2016 APT61_RS10175 55cc63417cc57936e4f41d475019f327 550 Gene3D G3DSA:1.20.1250.20 356 448 7.8E-5 T 22-04-2016 APT61_RS10175 55cc63417cc57936e4f41d475019f327 550 Pfam PF07690 Major Facilitator Superfamily 49 438 1.0E-10 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS10175 55cc63417cc57936e4f41d475019f327 550 PANTHER PTHR23501 32 534 2.8E-23 T 22-04-2016 APT61_RS10175 55cc63417cc57936e4f41d475019f327 550 SUPERFAMILY SSF103473 43 227 2.49E-19 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS10175 55cc63417cc57936e4f41d475019f327 550 SUPERFAMILY SSF103473 277 448 2.49E-19 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS10175 55cc63417cc57936e4f41d475019f327 550 SUPERFAMILY SSF103473 508 535 2.49E-19 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS16270 a1c1b5421d99da75df699f64890d90e4 382 Pfam PF01979 Amidohydrolase family 50 379 1.7E-45 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 APT61_RS16270 a1c1b5421d99da75df699f64890d90e4 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 377 9.5E-173 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APT61_RS16270 a1c1b5421d99da75df699f64890d90e4 382 PANTHER PTHR11113 1 382 2.2E-174 T 22-04-2016 APT61_RS16270 a1c1b5421d99da75df699f64890d90e4 382 Gene3D G3DSA:3.20.20.140 55 349 9.3E-95 T 22-04-2016 APT61_RS16270 a1c1b5421d99da75df699f64890d90e4 382 SUPERFAMILY SSF51556 54 350 1.13E-99 T 22-04-2016 IPR032466 Metal-dependent hydrolase APT61_RS16270 a1c1b5421d99da75df699f64890d90e4 382 PIRSF PIRSF038994 1 382 1.5E-112 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 APT61_RS16270 a1c1b5421d99da75df699f64890d90e4 382 PANTHER PTHR11113:SF7 1 382 2.2E-174 T 22-04-2016 APT61_RS16270 a1c1b5421d99da75df699f64890d90e4 382 Gene3D G3DSA:2.30.40.10 350 366 1.2E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS16270 a1c1b5421d99da75df699f64890d90e4 382 Gene3D G3DSA:2.30.40.10 2 54 1.2E-8 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS16270 a1c1b5421d99da75df699f64890d90e4 382 SUPERFAMILY SSF51338 1 53 7.71E-18 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 APT61_RS05115 ea96a9ba3a24b9b93d7c58e3a2a3e669 108 PANTHER PTHR35893:SF3 5 108 5.8E-40 T 22-04-2016 APT61_RS05115 ea96a9ba3a24b9b93d7c58e3a2a3e669 108 PANTHER PTHR35893 5 108 5.8E-40 T 22-04-2016 APT61_RS05115 ea96a9ba3a24b9b93d7c58e3a2a3e669 108 Pfam PF05957 Bacterial protein of unknown function (DUF883) 16 107 5.8E-20 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB APT61_RS08135 4c61aa719715ada1c78e58a6ab23aed0 124 Gene3D G3DSA:1.20.58.380 8 92 6.0E-18 T 22-04-2016 APT61_RS08135 4c61aa719715ada1c78e58a6ab23aed0 124 Pfam PF05400 Flagellar protein FliT 21 105 3.4E-21 T 22-04-2016 IPR008622 Flagellar protein FliT APT61_RS13710 84f9dcc9d445048a1537f6a8d32a7dcc 360 Pfam PF03235 Protein of unknown function DUF262 29 182 3.3E-25 T 22-04-2016 IPR004919 Domain of unknown function DUF262 APT61_RS13710 84f9dcc9d445048a1537f6a8d32a7dcc 360 PANTHER PTHR39639 25 274 9.9E-25 T 22-04-2016 APT61_RS05275 7852bb9db4b27430964d83ce7af8d3dd 110 SUPERFAMILY SSF160424 3 110 6.02E-15 T 22-04-2016 IPR006728 Protein of unknown function DUF600 APT61_RS05275 7852bb9db4b27430964d83ce7af8d3dd 110 Gene3D G3DSA:3.30.500.20 4 109 4.4E-4 T 22-04-2016 APT61_RS15755 f9d948ff59f3b8851c88ec2b98c832dc 331 SUPERFAMILY SSF111369 40 123 3.4E-10 T 22-04-2016 APT61_RS15755 f9d948ff59f3b8851c88ec2b98c832dc 331 PANTHER PTHR32347:SF12 4 325 1.8E-92 T 22-04-2016 APT61_RS15755 f9d948ff59f3b8851c88ec2b98c832dc 331 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 31 318 1.7E-16 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain APT61_RS15755 f9d948ff59f3b8851c88ec2b98c832dc 331 PANTHER PTHR32347 4 325 1.8E-92 T 22-04-2016 APT61_RS15755 f9d948ff59f3b8851c88ec2b98c832dc 331 Gene3D G3DSA:2.40.50.100 203 234 1.0E-13 T 22-04-2016 APT61_RS15755 f9d948ff59f3b8851c88ec2b98c832dc 331 Gene3D G3DSA:2.40.50.100 43 76 1.0E-13 T 22-04-2016 APT61_RS15755 f9d948ff59f3b8851c88ec2b98c832dc 331 SUPERFAMILY SSF111369 176 324 1.11E-13 T 22-04-2016 APT61_RS08090 b396e2781105bb4fe1b96b9e84de6b85 456 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS08090 b396e2781105bb4fe1b96b9e84de6b85 456 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 451 2.1E-196 T 22-04-2016 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS08090 b396e2781105bb4fe1b96b9e84de6b85 456 SUPERFAMILY SSF52540 109 379 3.99E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08090 b396e2781105bb4fe1b96b9e84de6b85 456 SMART SM00382 174 357 2.5E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS08090 b396e2781105bb4fe1b96b9e84de6b85 456 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 162 373 1.1E-70 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS08090 b396e2781105bb4fe1b96b9e84de6b85 456 PANTHER PTHR15184:SF9 5 453 2.9E-236 T 22-04-2016 IPR032463 ATPase, type III secretion system, FliI GO:0016887|GO:0030257|GO:0044780 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS08090 b396e2781105bb4fe1b96b9e84de6b85 456 PANTHER PTHR15184 5 453 2.9E-236 T 22-04-2016 APT61_RS08090 b396e2781105bb4fe1b96b9e84de6b85 456 Gene3D G3DSA:3.40.50.300 141 421 2.2E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS08090 b396e2781105bb4fe1b96b9e84de6b85 456 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 6 453 7.7E-199 T 22-04-2016 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 APT61_RS15640 8814ba5b9d4e09b9e37f371e951a86e2 527 PANTHER PTHR30443:SF4 3 527 7.4E-266 T 22-04-2016 APT61_RS15640 8814ba5b9d4e09b9e37f371e951a86e2 527 PANTHER PTHR30443 3 527 7.4E-266 T 22-04-2016 APT61_RS15640 8814ba5b9d4e09b9e37f371e951a86e2 527 Gene3D G3DSA:3.40.720.10 220 485 2.5E-11 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 APT61_RS15640 8814ba5b9d4e09b9e37f371e951a86e2 527 SUPERFAMILY SSF53649 220 486 1.08E-16 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 APT61_RS15640 8814ba5b9d4e09b9e37f371e951a86e2 527 Pfam PF00884 Sulfatase 219 482 6.4E-38 T 22-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 APT61_RS08240 ef44fadb047e44f4425218dc35e4af68 321 PANTHER PTHR32196 7 310 2.3E-109 T 22-04-2016 APT61_RS08240 ef44fadb047e44f4425218dc35e4af68 321 PANTHER PTHR32196:SF39 7 310 2.3E-109 T 22-04-2016 APT61_RS08240 ef44fadb047e44f4425218dc35e4af68 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 306 8.1E-37 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS06330 7866f1feb24361ea0917f32e48e90b82 278 PANTHER PTHR10534 4 275 1.0E-136 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APT61_RS06330 7866f1feb24361ea0917f32e48e90b82 278 Gene3D G3DSA:3.40.1190.20 16 274 1.3E-67 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS06330 7866f1feb24361ea0917f32e48e90b82 278 PANTHER PTHR10534:SF6 4 275 1.0E-136 T 22-04-2016 APT61_RS06330 7866f1feb24361ea0917f32e48e90b82 278 SUPERFAMILY SSF53613 16 274 5.14E-58 T 22-04-2016 IPR029056 Ribokinase-like APT61_RS06330 7866f1feb24361ea0917f32e48e90b82 278 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 15 274 2.5E-48 T 22-04-2016 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 APT61_RS06330 7866f1feb24361ea0917f32e48e90b82 278 Pfam PF08543 Phosphomethylpyrimidine kinase 87 268 3.0E-24 T 22-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 APT61_RS06975 3cbfdd85759dcb2f9e09fcc7ef308a08 352 Gene3D G3DSA:3.20.20.190 26 350 6.0E-96 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APT61_RS06975 3cbfdd85759dcb2f9e09fcc7ef308a08 352 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 30 344 4.3E-75 T 22-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 APT61_RS06975 3cbfdd85759dcb2f9e09fcc7ef308a08 352 SUPERFAMILY SSF51695 26 349 8.63E-95 T 22-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 APT61_RS06975 3cbfdd85759dcb2f9e09fcc7ef308a08 352 PANTHER PTHR23344 24 350 2.7E-120 T 22-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 APT61_RS06975 3cbfdd85759dcb2f9e09fcc7ef308a08 352 PANTHER PTHR23344:SF7 24 350 2.7E-120 T 22-04-2016 APT61_RS21625 07a646d14b5af55a85ab2d876a7fae10 369 Pfam PF13439 Glycosyltransferase Family 4 14 176 4.1E-17 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT61_RS21625 07a646d14b5af55a85ab2d876a7fae10 369 PANTHER PTHR12526 1 369 5.6E-53 T 22-04-2016 APT61_RS21625 07a646d14b5af55a85ab2d876a7fae10 369 Pfam PF00534 Glycosyl transferases group 1 187 345 2.5E-27 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APT61_RS21625 07a646d14b5af55a85ab2d876a7fae10 369 Gene3D G3DSA:3.40.50.2000 158 336 7.7E-25 T 22-04-2016 APT61_RS21625 07a646d14b5af55a85ab2d876a7fae10 369 SUPERFAMILY SSF53756 2 367 1.7E-68 T 22-04-2016 APT61_RS07685 a544e0da6200b6c7bf40a9689295ff0d 406 TIGRFAM TIGR04010 WcaD: putative colanic acid polymerase WcaD 1 404 4.7E-261 T 22-04-2016 IPR024013 Colanic acid biosynthesis, putative colanic acid polymerase, WcaD UniPathway: UPA00936 APT61_RS13395 de37a790e0666ecbab1ba46d8dc149f7 105 Pfam PF10554 Ash protein family 2 54 2.1E-13 T 22-04-2016 IPR018880 Bacteriophage P4, Ash protein APT61_RS08255 5e2f48ff4e8cf7524a837020aaa9e4d5 327 Gene3D G3DSA:3.40.50.2300 28 147 8.7E-27 T 22-04-2016 APT61_RS08255 5e2f48ff4e8cf7524a837020aaa9e4d5 327 Gene3D G3DSA:3.40.50.2300 148 281 3.9E-26 T 22-04-2016 APT61_RS08255 5e2f48ff4e8cf7524a837020aaa9e4d5 327 PANTHER PTHR32196 18 320 6.9E-115 T 22-04-2016 APT61_RS08255 5e2f48ff4e8cf7524a837020aaa9e4d5 327 Pfam PF13407 Periplasmic binding protein domain 39 288 5.2E-52 T 22-04-2016 IPR025997 Periplasmic binding protein APT61_RS08255 5e2f48ff4e8cf7524a837020aaa9e4d5 327 PANTHER PTHR32196:SF36 18 320 6.9E-115 T 22-04-2016 APT61_RS08255 5e2f48ff4e8cf7524a837020aaa9e4d5 327 SUPERFAMILY SSF53822 28 325 2.36E-63 T 22-04-2016 IPR028082 Periplasmic binding protein-like I APT61_RS21815 b8c3312af165197c8b877d5b7be2fa2d 145 PANTHER PTHR23091 12 133 4.1E-22 T 22-04-2016 APT61_RS21815 b8c3312af165197c8b877d5b7be2fa2d 145 SUPERFAMILY SSF55729 1 142 1.86E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS21815 b8c3312af165197c8b877d5b7be2fa2d 145 Gene3D G3DSA:3.40.630.30 1 137 9.8E-25 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS21815 b8c3312af165197c8b877d5b7be2fa2d 145 Pfam PF13673 Acetyltransferase (GNAT) domain 51 128 1.1E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS21815 b8c3312af165197c8b877d5b7be2fa2d 145 PANTHER PTHR23091:SF277 12 133 4.1E-22 T 22-04-2016 APT61_RS13215 2bb006f0f869910018a38cb49ed70951 210 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APT61_RS13215 2bb006f0f869910018a38cb49ed70951 210 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 1.9E-9 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 APT61_RS14575 1bd6e8a1cb39daa32dc307490908b477 367 SUPERFAMILY SSF51395 1 362 1.1E-116 T 22-04-2016 APT61_RS14575 1bd6e8a1cb39daa32dc307490908b477 367 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 340 4.6E-69 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 APT61_RS14575 1bd6e8a1cb39daa32dc307490908b477 367 PANTHER PTHR22893 1 355 1.6E-149 T 22-04-2016 APT61_RS14575 1bd6e8a1cb39daa32dc307490908b477 367 PANTHER PTHR22893:SF7 1 355 1.6E-149 T 22-04-2016 APT61_RS14575 1bd6e8a1cb39daa32dc307490908b477 367 Gene3D G3DSA:3.20.20.70 1 358 2.0E-126 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS14820 2d01ddcb91436ea541bb31e9456415f5 178 PIRSF PIRSF010252 1 178 4.1E-64 T 22-04-2016 IPR009809 Cell division protein ZapC APT61_RS14820 2d01ddcb91436ea541bb31e9456415f5 178 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 177 39.246 T 22-04-2016 IPR009809 Cell division protein ZapC APT61_RS14820 2d01ddcb91436ea541bb31e9456415f5 178 Pfam PF07126 Cell-division protein ZapC 3 167 8.2E-70 T 22-04-2016 IPR009809 Cell division protein ZapC APT61_RS01700 c325fd3f89b0bb75d044d4b139dac90b 257 SUPERFAMILY SSF53474 3 250 2.91E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS01700 c325fd3f89b0bb75d044d4b139dac90b 257 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 46.535 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 APT61_RS01700 c325fd3f89b0bb75d044d4b139dac90b 257 PANTHER PTHR10992:SF812 1 255 8.2E-132 T 22-04-2016 APT61_RS01700 c325fd3f89b0bb75d044d4b139dac90b 257 Pfam PF00561 alpha/beta hydrolase fold 15 242 8.2E-27 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS01700 c325fd3f89b0bb75d044d4b139dac90b 257 Gene3D G3DSA:3.40.50.1820 3 252 1.4E-54 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS01700 c325fd3f89b0bb75d044d4b139dac90b 257 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 1.9E-111 T 22-04-2016 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519|UniPathway: UPA00078 APT61_RS01700 c325fd3f89b0bb75d044d4b139dac90b 257 PANTHER PTHR10992 1 255 8.2E-132 T 22-04-2016 APT61_RS00890 45c6180cbbd29cee8a61da0f5aba63b4 450 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 443 2.4E-260 T 22-04-2016 APT61_RS00890 45c6180cbbd29cee8a61da0f5aba63b4 450 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 448 41.102 T 22-04-2016 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 UniPathway: UPA00566 APT61_RS20690 4a9f3f13c92d0033466d6d426461aabd 226 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS20690 4a9f3f13c92d0033466d6d426461aabd 226 Pfam PF00005 ABC transporter 24 178 8.1E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS20690 4a9f3f13c92d0033466d6d426461aabd 226 PANTHER PTHR24220:SF380 3 224 2.3E-128 T 22-04-2016 APT61_RS20690 4a9f3f13c92d0033466d6d426461aabd 226 SMART SM00382 33 225 1.7E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS20690 4a9f3f13c92d0033466d6d426461aabd 226 SUPERFAMILY SSF52540 2 222 3.16E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20690 4a9f3f13c92d0033466d6d426461aabd 226 PANTHER PTHR24220 3 224 2.3E-128 T 22-04-2016 APT61_RS20690 4a9f3f13c92d0033466d6d426461aabd 226 Gene3D G3DSA:3.40.50.300 1 221 4.3E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20690 4a9f3f13c92d0033466d6d426461aabd 226 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 1 218 3.6E-109 T 22-04-2016 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 APT61_RS21635 156c982cc070b4ed0dd5d5157682f2b2 432 Pfam PF04932 O-Antigen ligase 189 359 1.6E-9 T 22-04-2016 IPR007016 O-antigen ligase-related APT61_RS02125 0129a52ce62efb8608c022f1ba652acd 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 1.1E-25 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02125 0129a52ce62efb8608c022f1ba652acd 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.493 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid APT61_RS02125 0129a52ce62efb8608c022f1ba652acd 101 PANTHER PTHR19836 1 101 8.6E-60 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02125 0129a52ce62efb8608c022f1ba652acd 101 Gene3D G3DSA:4.10.830.10 41 101 3.1E-30 T 22-04-2016 APT61_RS02125 0129a52ce62efb8608c022f1ba652acd 101 SUPERFAMILY SSF57716 2 101 9.98E-37 T 22-04-2016 APT61_RS02125 0129a52ce62efb8608c022f1ba652acd 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 APT61_RS06085 3645087119566034005f3440532d7481 248 PANTHER PTHR10992:SF832 24 175 5.2E-30 T 22-04-2016 APT61_RS06085 3645087119566034005f3440532d7481 248 PANTHER PTHR10992:SF832 192 245 5.2E-30 T 22-04-2016 APT61_RS06085 3645087119566034005f3440532d7481 248 PANTHER PTHR10992 24 175 5.2E-30 T 22-04-2016 APT61_RS06085 3645087119566034005f3440532d7481 248 PANTHER PTHR10992 192 245 5.2E-30 T 22-04-2016 APT61_RS06085 3645087119566034005f3440532d7481 248 Pfam PF12697 Alpha/beta hydrolase family 29 241 1.6E-21 T 22-04-2016 IPR000073 Alpha/beta hydrolase fold-1 APT61_RS06085 3645087119566034005f3440532d7481 248 SUPERFAMILY SSF53474 25 245 1.85E-30 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS06085 3645087119566034005f3440532d7481 248 Gene3D G3DSA:3.40.50.1820 26 246 1.3E-36 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS05430 a3ecc1a7a7feea530eda52d30da5be4c 934 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 852 932 3.4E-13 T 22-04-2016 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass APT61_RS17245 683af07ac2932606d0b3ae6cd9e9688d 428 PANTHER PTHR11730:SF17 19 427 3.3E-188 T 22-04-2016 APT61_RS17245 683af07ac2932606d0b3ae6cd9e9688d 428 SUPERFAMILY SSF111352 27 407 1.44E-128 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 APT61_RS17245 683af07ac2932606d0b3ae6cd9e9688d 428 PANTHER PTHR11730 19 427 3.3E-188 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 APT61_RS17245 683af07ac2932606d0b3ae6cd9e9688d 428 Pfam PF00909 Ammonium Transporter Family 33 426 1.7E-128 T 22-04-2016 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 APT61_RS17245 683af07ac2932606d0b3ae6cd9e9688d 428 Gene3D G3DSA:1.10.3430.10 26 407 2.0E-139 T 22-04-2016 IPR029020 Ammonium/urea transporter APT61_RS17245 683af07ac2932606d0b3ae6cd9e9688d 428 ProSitePatterns PS01219 Ammonium transporters signature. 182 207 - T 22-04-2016 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 APT61_RS17245 683af07ac2932606d0b3ae6cd9e9688d 428 TIGRFAM TIGR00836 amt: ammonium transporter 31 426 9.9E-139 T 22-04-2016 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 APT61_RS17245 683af07ac2932606d0b3ae6cd9e9688d 428 PRINTS PR00342 Rhesus blood group protein signature 126 142 3.3E-5 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 APT61_RS17245 683af07ac2932606d0b3ae6cd9e9688d 428 PRINTS PR00342 Rhesus blood group protein signature 307 325 3.3E-5 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 APT61_RS17245 683af07ac2932606d0b3ae6cd9e9688d 428 PRINTS PR00342 Rhesus blood group protein signature 252 274 3.3E-5 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 APT61_RS17245 683af07ac2932606d0b3ae6cd9e9688d 428 PRINTS PR00342 Rhesus blood group protein signature 221 239 3.3E-5 T 22-04-2016 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 APT61_RS03915 4616e22f4ccad7be1fbe763e1d85634f 418 Pfam PF03825 Nucleoside H+ symporter 1 406 2.6E-181 T 22-04-2016 APT61_RS03915 4616e22f4ccad7be1fbe763e1d85634f 418 Gene3D G3DSA:1.20.1250.20 6 123 2.4E-6 T 22-04-2016 APT61_RS03915 4616e22f4ccad7be1fbe763e1d85634f 418 SUPERFAMILY SSF103473 9 408 8.5E-32 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS03915 4616e22f4ccad7be1fbe763e1d85634f 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 4.4E-214 T 22-04-2016 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 APT61_RS03915 4616e22f4ccad7be1fbe763e1d85634f 418 Gene3D G3DSA:1.20.1250.20 206 408 1.1E-18 T 22-04-2016 APT61_RS03915 4616e22f4ccad7be1fbe763e1d85634f 418 PANTHER PTHR23522 1 418 0.0 T 22-04-2016 APT61_RS03915 4616e22f4ccad7be1fbe763e1d85634f 418 PANTHER PTHR23522:SF2 1 418 0.0 T 22-04-2016 APT61_RS02305 34b1f38854b5aa971f460be1ec25a67a 393 Gene3D G3DSA:1.10.3720.10 82 197 8.1E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS02305 34b1f38854b5aa971f460be1ec25a67a 393 Gene3D G3DSA:1.10.3720.10 198 388 4.1E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS02305 34b1f38854b5aa971f460be1ec25a67a 393 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 84 147 1.2E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APT61_RS02305 34b1f38854b5aa971f460be1ec25a67a 393 PANTHER PTHR30085:SF1 251 393 2.6E-164 T 22-04-2016 APT61_RS02305 34b1f38854b5aa971f460be1ec25a67a 393 PANTHER PTHR30085:SF1 14 172 2.6E-164 T 22-04-2016 APT61_RS02305 34b1f38854b5aa971f460be1ec25a67a 393 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 388 7.9E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS02305 34b1f38854b5aa971f460be1ec25a67a 393 SUPERFAMILY SSF161098 182 374 2.62E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS02305 34b1f38854b5aa971f460be1ec25a67a 393 PANTHER PTHR30085 251 393 2.6E-164 T 22-04-2016 APT61_RS02305 34b1f38854b5aa971f460be1ec25a67a 393 PANTHER PTHR30085 14 172 2.6E-164 T 22-04-2016 APT61_RS02305 34b1f38854b5aa971f460be1ec25a67a 393 SUPERFAMILY SSF161098 83 213 3.53E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS00885 acd30cb6e32ad98f47ad31ab3cea2788 359 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 355 1.7E-179 T 22-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 APT61_RS00885 acd30cb6e32ad98f47ad31ab3cea2788 359 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 359 64.617 T 22-04-2016 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 UniPathway: UPA00566 APT61_RS18525 fd37430ccfce91ee6d17269623133c5a 297 PIRSF PIRSF006250 17 297 1.7E-109 T 22-04-2016 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD APT61_RS18525 fd37430ccfce91ee6d17269623133c5a 297 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 43 129 2.9E-25 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 APT61_RS18525 fd37430ccfce91ee6d17269623133c5a 297 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 296 2.1E-102 T 22-04-2016 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|UniPathway: UPA00253 APT61_RS18525 fd37430ccfce91ee6d17269623133c5a 297 PANTHER PTHR32179 1 297 4.3E-130 T 22-04-2016 APT61_RS18525 fd37430ccfce91ee6d17269623133c5a 297 SUPERFAMILY SSF51690 131 296 2.55E-59 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APT61_RS18525 fd37430ccfce91ee6d17269623133c5a 297 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 131 295 1.1E-60 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 APT61_RS18525 fd37430ccfce91ee6d17269623133c5a 297 Gene3D G3DSA:3.20.20.70 152 285 3.4E-59 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS18525 fd37430ccfce91ee6d17269623133c5a 297 Gene3D G3DSA:3.90.1170.20 20 151 3.0E-48 T 22-04-2016 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 APT61_RS18525 fd37430ccfce91ee6d17269623133c5a 297 SUPERFAMILY SSF54675 13 130 1.45E-31 T 22-04-2016 APT61_RS09440 a27c8d831498d97da3dbca73b022b943 98 Pfam PF03795 YCII-related domain 2 95 3.1E-27 T 22-04-2016 IPR005545 YCII-related APT61_RS09440 a27c8d831498d97da3dbca73b022b943 98 Gene3D G3DSA:3.30.70.1060 2 98 1.4E-37 T 22-04-2016 APT61_RS09440 a27c8d831498d97da3dbca73b022b943 98 PANTHER PTHR33606 1 98 6.3E-33 T 22-04-2016 APT61_RS09440 a27c8d831498d97da3dbca73b022b943 98 SUPERFAMILY SSF54909 2 98 3.43E-32 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel APT61_RS10910 8251fae7cfd2c67f67f70ed1103f2610 231 SUPERFAMILY SSF110296 85 170 6.8E-5 T 22-04-2016 APT61_RS11280 0eb30270a3dae3b4b4e14b1069512dd9 446 PANTHER PTHR30032:SF2 270 438 1.5E-91 T 22-04-2016 APT61_RS11280 0eb30270a3dae3b4b4e14b1069512dd9 446 PANTHER PTHR30032:SF2 61 250 1.5E-91 T 22-04-2016 APT61_RS11280 0eb30270a3dae3b4b4e14b1069512dd9 446 PANTHER PTHR30032 270 438 1.5E-91 T 22-04-2016 APT61_RS11280 0eb30270a3dae3b4b4e14b1069512dd9 446 PANTHER PTHR30032 61 250 1.5E-91 T 22-04-2016 APT61_RS11280 0eb30270a3dae3b4b4e14b1069512dd9 446 SUPERFAMILY SSF51445 88 369 9.96E-31 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily APT61_RS11280 0eb30270a3dae3b4b4e14b1069512dd9 446 Gene3D G3DSA:3.20.20.80 217 298 4.6E-8 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS11280 0eb30270a3dae3b4b4e14b1069512dd9 446 Gene3D G3DSA:3.20.20.80 96 172 4.6E-8 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 APT61_RS11280 0eb30270a3dae3b4b4e14b1069512dd9 446 Pfam PF02638 Glycosyl hydrolase-like 10 63 396 2.6E-118 T 22-04-2016 IPR003790 Glycosyl hydrolase-like 10 APT61_RS11810 67ceb18a31ac6cbed99dfa3f591bf2fc 261 SMART SM00346 16 103 4.1E-19 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APT61_RS11810 67ceb18a31ac6cbed99dfa3f591bf2fc 261 Gene3D G3DSA:1.10.10.10 10 82 1.5E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11810 67ceb18a31ac6cbed99dfa3f591bf2fc 261 PANTHER PTHR30136 9 256 7.8E-43 T 22-04-2016 APT61_RS11810 67ceb18a31ac6cbed99dfa3f591bf2fc 261 SUPERFAMILY SSF46785 16 82 9.25E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS11810 67ceb18a31ac6cbed99dfa3f591bf2fc 261 SUPERFAMILY SSF55781 74 249 7.85E-33 T 22-04-2016 IPR029016 GAF domain-like APT61_RS11810 67ceb18a31ac6cbed99dfa3f591bf2fc 261 Pfam PF09339 IclR helix-turn-helix domain 19 67 3.7E-13 T 22-04-2016 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 APT61_RS11810 67ceb18a31ac6cbed99dfa3f591bf2fc 261 Gene3D G3DSA:3.30.450.40 88 254 7.1E-33 T 22-04-2016 IPR029016 GAF domain-like APT61_RS11810 67ceb18a31ac6cbed99dfa3f591bf2fc 261 Pfam PF01614 Bacterial transcriptional regulator 130 246 7.1E-16 T 22-04-2016 IPR014757 Transcription regulator IclR, C-terminal APT61_RS16935 992a0daba51fdbcee00efdcb8ec8ff53 360 Gene3D G3DSA:2.130.10.10 77 338 1.2E-32 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APT61_RS16935 992a0daba51fdbcee00efdcb8ec8ff53 360 SUPERFAMILY SSF51004 50 347 2.88E-42 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain APT61_RS09740 1f96be85a3037c8703df79f0444ca419 304 Gene3D G3DSA:2.40.160.40 24 304 2.4E-115 T 22-04-2016 APT61_RS09740 1f96be85a3037c8703df79f0444ca419 304 Pfam PF09381 Outer membrane protein G (OmpG) 1 304 3.5E-150 T 22-04-2016 IPR018981 Outer membrane protein G APT61_RS09740 1f96be85a3037c8703df79f0444ca419 304 SUPERFAMILY SSF103515 99 304 2.09E-6 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS19425 23608814af85e37bd812eb844144584b 302 SUPERFAMILY SSF53448 31 134 1.97E-5 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS19425 23608814af85e37bd812eb844144584b 302 PANTHER PTHR21461 11 224 1.3E-17 T 22-04-2016 APT61_RS19425 23608814af85e37bd812eb844144584b 302 Pfam PF01697 Glycosyltransferase family 92 11 177 1.5E-13 T 22-04-2016 IPR008166 Glycosyltransferase family 92 APT61_RS06645 b5343d1bed2dfba3639be7bba872e417 181 Pfam PF04315 Elongation factor P hydroxylase 13 173 2.5E-79 T 22-04-2016 IPR007411 Elongation factor P hydroxylase KEGG: 00053+1.14.-.-|KEGG: 00073+1.14.-.-|KEGG: 00130+1.14.-.-|KEGG: 00253+1.14.-.-|KEGG: 00361+1.14.-.-|KEGG: 00363+1.14.-.-|KEGG: 00380+1.14.-.-|KEGG: 00522+1.14.-.-|KEGG: 00600+1.14.-.-|KEGG: 00624+1.14.-.-|KEGG: 00625+1.14.-.-|KEGG: 00627+1.14.-.-|KEGG: 00903+1.14.-.-|KEGG: 00904+1.14.-.-|KEGG: 00905+1.14.-.-|KEGG: 00906+1.14.-.-|KEGG: 00940+1.14.-.-|KEGG: 00945+1.14.-.-|KEGG: 00966+1.14.-.-|KEGG: 00981+1.14.-.- APT61_RS19660 576efff83e20dada6e2d55b1fce3d055 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 125 3.8E-12 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain APT61_RS19660 576efff83e20dada6e2d55b1fce3d055 128 PANTHER PTHR36113 2 126 1.4E-34 T 22-04-2016 APT61_RS19660 576efff83e20dada6e2d55b1fce3d055 128 PANTHER PTHR36113:SF1 2 126 1.4E-34 T 22-04-2016 APT61_RS19660 576efff83e20dada6e2d55b1fce3d055 128 SUPERFAMILY SSF54593 1 126 2.01E-25 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS19660 576efff83e20dada6e2d55b1fce3d055 128 Gene3D G3DSA:3.10.180.10 1 126 7.4E-33 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase APT61_RS13930 94f4abfb1ee8b93531ac8d954783a53f 124 Pfam PF07233 Protein of unknown function (DUF1425) 33 123 2.7E-24 T 22-04-2016 IPR010824 Protein of unknown function DUF1425 APT61_RS18140 22b5d965ade2525c3564dfed28c4341b 232 Pfam PF04170 NlpE N-terminal domain 44 127 4.9E-26 T 22-04-2016 IPR007298 Copper resistance lipoprotein NlpE APT61_RS18140 22b5d965ade2525c3564dfed28c4341b 232 Pfam PF17185 NlpE C-terminal OB domain 141 230 9.0E-35 T 22-04-2016 IPR033450 NlpE, C-terminal OB domain APT61_RS07405 944b6c30ac8921721c49a240ba8fc944 156 Pfam PF07308 Protein of unknown function (DUF1456) 86 148 6.2E-21 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 APT61_RS07405 944b6c30ac8921721c49a240ba8fc944 156 Pfam PF07308 Protein of unknown function (DUF1456) 4 70 8.5E-24 T 22-04-2016 IPR009921 Domain of unknown function DUF1456 APT61_RS07405 944b6c30ac8921721c49a240ba8fc944 156 PANTHER PTHR37805:SF1 1 156 1.3E-76 T 22-04-2016 APT61_RS07405 944b6c30ac8921721c49a240ba8fc944 156 PANTHER PTHR37805 1 156 1.3E-76 T 22-04-2016 APT61_RS01950 b977c15f4303f03c077ec571241928bf 205 TIGRFAM TIGR03135 malonate_mdcG: malonate decarboxylase holo-[acyl-carrier-protein] synthase 6 199 5.7E-45 T 22-04-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 APT61_RS01950 b977c15f4303f03c077ec571241928bf 205 Pfam PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG 6 200 7.0E-53 T 22-04-2016 IPR017557 Phosphoribosyl-dephospho-CoA transferase GO:0016779 MetaCyc: PWY-5796 APT61_RS02225 22c76138abba00333078899cfa4148d2 374 Gene3D G3DSA:3.40.50.450 110 252 5.8E-7 T 22-04-2016 APT61_RS02225 22c76138abba00333078899cfa4148d2 374 PANTHER PTHR32039 59 369 1.7E-118 T 22-04-2016 APT61_RS02225 22c76138abba00333078899cfa4148d2 374 PANTHER PTHR32039:SF8 59 369 1.7E-118 T 22-04-2016 APT61_RS02225 22c76138abba00333078899cfa4148d2 374 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 65 283 1.4E-81 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APT61_RS02225 22c76138abba00333078899cfa4148d2 374 SUPERFAMILY SSF102405 76 283 1.26E-37 T 22-04-2016 APT61_RS02225 22c76138abba00333078899cfa4148d2 374 Pfam PF02481 DNA recombination-mediator protein A 68 274 4.2E-70 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 APT61_RS10990 7af0ac22c19fd490f87261a2c6d4b5d0 226 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 4 226 5.9E-120 T 22-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 APT61_RS10990 7af0ac22c19fd490f87261a2c6d4b5d0 226 PANTHER PTHR30598:SF4 2 226 5.5E-168 T 22-04-2016 APT61_RS10990 7af0ac22c19fd490f87261a2c6d4b5d0 226 PANTHER PTHR30598 2 226 5.5E-168 T 22-04-2016 APT61_RS10990 7af0ac22c19fd490f87261a2c6d4b5d0 226 SUPERFAMILY SSF103501 4 225 9.02E-69 T 22-04-2016 IPR023234 NarG-like domain APT61_RS10990 7af0ac22c19fd490f87261a2c6d4b5d0 226 Pfam PF02665 Nitrate reductase gamma subunit 6 225 3.0E-81 T 22-04-2016 IPR023234 NarG-like domain APT61_RS10990 7af0ac22c19fd490f87261a2c6d4b5d0 226 Gene3D G3DSA:1.20.950.20 4 217 4.4E-73 T 22-04-2016 APT61_RS14150 dda1a1db6e725e3577be09b3fdbaf750 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 9.0E-39 T 22-04-2016 IPR025730 Biofilm regulator BssS APT61_RS14150 dda1a1db6e725e3577be09b3fdbaf750 84 Pfam PF13991 BssS protein family 11 82 1.1E-34 T 22-04-2016 IPR025730 Biofilm regulator BssS APT61_RS03855 efe80f070b2e1e9898fcf47622ec5d15 279 Gene3D G3DSA:3.40.50.1820 166 263 3.2E-11 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS03855 efe80f070b2e1e9898fcf47622ec5d15 279 SUPERFAMILY SSF53474 128 267 9.7E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS03855 efe80f070b2e1e9898fcf47622ec5d15 279 Gene3D G3DSA:3.40.50.1820 111 165 2.9E-4 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS15710 d86717fd499c6a89422b210096ad698f 321 Gene3D G3DSA:1.20.970.10 7 69 9.4E-19 T 22-04-2016 APT61_RS15710 d86717fd499c6a89422b210096ad698f 321 SUPERFAMILY SSF47648 7 72 3.53E-15 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APT61_RS15710 d86717fd499c6a89422b210096ad698f 321 Gene3D G3DSA:3.40.1030.10 81 320 1.2E-38 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APT61_RS15710 d86717fd499c6a89422b210096ad698f 321 SUPERFAMILY SSF52418 76 319 1.07E-45 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 APT61_RS15710 d86717fd499c6a89422b210096ad698f 321 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 68 5.7E-11 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain APT61_RS10285 701ef716ec5d39a310a490240a67a0d8 191 PANTHER PTHR38593 3 190 3.3E-19 T 22-04-2016 APT61_RS10285 701ef716ec5d39a310a490240a67a0d8 191 Gene3D G3DSA:1.20.1260.10 53 174 1.5E-5 T 22-04-2016 IPR012347 Ferritin-related APT61_RS10285 701ef716ec5d39a310a490240a67a0d8 191 PANTHER PTHR38593:SF1 3 190 3.3E-19 T 22-04-2016 APT61_RS10285 701ef716ec5d39a310a490240a67a0d8 191 Pfam PF13628 Domain of unknown function (DUF4142) 54 189 2.5E-37 T 22-04-2016 IPR025419 Domain of unknown function DUF4142 APT61_RS08015 ce96f02dd50c0728a27702d6a4910ee8 60 Pfam PF09926 Uncharacterized small protein (DUF2158) 9 48 2.9E-8 T 22-04-2016 IPR019226 Protein of unknown function DUF2158 APT61_RS09095 ba582f369ea4dfecd22702eb8a420c6a 231 SMART SM00953 81 209 2.7E-25 T 22-04-2016 IPR014914 RES domain APT61_RS09095 ba582f369ea4dfecd22702eb8a420c6a 231 Pfam PF08808 RES domain 72 205 4.4E-25 T 22-04-2016 IPR014914 RES domain APT61_RS15485 5b96beb8adab8cd641256a053655e949 259 PANTHER PTHR32502:SF2 1 259 2.2E-74 T 22-04-2016 APT61_RS15485 5b96beb8adab8cd641256a053655e949 259 Pfam PF03609 PTS system sorbose-specific iic component 1 233 1.6E-71 T 22-04-2016 IPR004700 Phosphotransferase system, sorbose-specific IIC subunit GO:0009401|GO:0016021 APT61_RS15485 5b96beb8adab8cd641256a053655e949 259 PANTHER PTHR32502 1 259 2.2E-74 T 22-04-2016 APT61_RS00160 6c63811d2264c32564eedf9f67702dea 171 Pfam PF04220 Der GTPase activator (YihI) 14 167 2.2E-54 T 22-04-2016 IPR007336 Der GTPase activator APT61_RS00160 6c63811d2264c32564eedf9f67702dea 171 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 170 17.221 T 22-04-2016 IPR007336 Der GTPase activator APT61_RS20005 abed7e2b73769202646a8ed0062f9a5f 106 Gene3D G3DSA:1.10.1790.10 34 103 1.5E-4 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS20005 abed7e2b73769202646a8ed0062f9a5f 106 TIGRFAM TIGR03582 EF_0829: PRD domain protein, EF_0829/AHA_3910 family 9 105 1.6E-41 T 22-04-2016 IPR020044 PRD domain protein, EF0829/AHA3910 APT61_RS20005 abed7e2b73769202646a8ed0062f9a5f 106 SUPERFAMILY SSF63520 18 103 9.16E-9 T 22-04-2016 IPR011608 PRD domain GO:0006355 APT61_RS17395 8db7ce923e606ed5778bf9bf45de134b 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 16.942 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APT61_RS17395 8db7ce923e606ed5778bf9bf45de134b 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 2.3E-24 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APT61_RS17395 8db7ce923e606ed5778bf9bf45de134b 80 SUPERFAMILY SSF116842 3 74 2.22E-22 T 22-04-2016 APT61_RS17395 8db7ce923e606ed5778bf9bf45de134b 80 PIRSF PIRSF006488 1 80 8.3E-25 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APT61_RS17395 8db7ce923e606ed5778bf9bf45de134b 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 8.0E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APT61_RS17395 8db7ce923e606ed5778bf9bf45de134b 80 PANTHER PTHR34137 1 80 3.9E-27 T 22-04-2016 APT61_RS17395 8db7ce923e606ed5778bf9bf45de134b 80 Gene3D G3DSA:1.10.287.1040 7 78 2.0E-30 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APT61_RS17395 8db7ce923e606ed5778bf9bf45de134b 80 Pfam PF02609 Exonuclease VII small subunit 11 62 1.8E-21 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 APT61_RS07145 3d2e801d7c5e5a9076d38b4ccb118700 518 SUPERFAMILY SSF141868 266 511 2.48E-69 T 22-04-2016 IPR001633 EAL domain APT61_RS07145 3d2e801d7c5e5a9076d38b4ccb118700 518 PANTHER PTHR33121:SF1 201 509 1.0E-117 T 22-04-2016 APT61_RS07145 3d2e801d7c5e5a9076d38b4ccb118700 518 Pfam PF12792 CSS motif domain associated with EAL 43 235 1.7E-36 T 22-04-2016 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain APT61_RS07145 3d2e801d7c5e5a9076d38b4ccb118700 518 Gene3D G3DSA:3.20.20.450 266 509 8.3E-72 T 22-04-2016 IPR001633 EAL domain APT61_RS07145 3d2e801d7c5e5a9076d38b4ccb118700 518 Pfam PF00563 EAL domain 266 500 6.6E-63 T 22-04-2016 IPR001633 EAL domain APT61_RS07145 3d2e801d7c5e5a9076d38b4ccb118700 518 PANTHER PTHR33121 201 509 1.0E-117 T 22-04-2016 APT61_RS07145 3d2e801d7c5e5a9076d38b4ccb118700 518 SMART SM00052 260 505 1.0E-96 T 22-04-2016 IPR001633 EAL domain APT61_RS16555 c14203b343eaa1308be946b04dd7334d 413 Pfam PF08309 LVIVD repeat 32 59 2.3 T 22-04-2016 IPR013211 LVIVD APT61_RS16555 c14203b343eaa1308be946b04dd7334d 413 SUPERFAMILY SSF50969 121 390 5.18E-7 T 22-04-2016 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like APT61_RS17560 3c7e2c15085cac3ec1eb4f64a9c7ee7c 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 144 1.6E-49 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 APT61_RS17560 3c7e2c15085cac3ec1eb4f64a9c7ee7c 152 PANTHER PTHR35146 1 152 5.9E-61 T 22-04-2016 APT61_RS17560 3c7e2c15085cac3ec1eb4f64a9c7ee7c 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 32.649 T 22-04-2016 IPR003791 Protein of unknown function UPF0178 APT61_RS17560 3c7e2c15085cac3ec1eb4f64a9c7ee7c 152 PANTHER PTHR35146:SF1 1 152 5.9E-61 T 22-04-2016 APT61_RS00595 607be0da59932858ea241314a2950864 105 Hamap MF_00744 Met repressor [metJ]. 1 105 40.655 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 APT61_RS00595 607be0da59932858ea241314a2950864 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 7.0E-47 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 APT61_RS00595 607be0da59932858ea241314a2950864 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 2.9E-58 T 22-04-2016 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 APT61_RS00595 607be0da59932858ea241314a2950864 105 SUPERFAMILY SSF47598 2 105 7.78E-58 T 22-04-2016 IPR010985 Ribbon-helix-helix GO:0006355 APT61_RS00595 607be0da59932858ea241314a2950864 105 Gene3D G3DSA:1.10.140.10 2 105 3.4E-65 T 22-04-2016 IPR023453 Methionine repressor MetJ domain APT61_RS12350 bf8c9a9836df0f7d0ab9b4f2910fb10c 467 Pfam PF13264 Domain of unknown function (DUF4055) 249 386 1.6E-44 T 22-04-2016 IPR025129 Domain of unknown function DUF4055 APT61_RS12915 adc6fb40e7ed15a8725d01c00fc7f4b5 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 4.7E-45 T 22-04-2016 IPR003736 Phenylacetic acid degradation-related domain APT61_RS12915 adc6fb40e7ed15a8725d01c00fc7f4b5 136 Gene3D G3DSA:3.10.129.10 1 136 1.9E-51 T 22-04-2016 IPR029069 HotDog domain APT61_RS12915 adc6fb40e7ed15a8725d01c00fc7f4b5 136 PANTHER PTHR12418:SF33 2 136 9.0E-51 T 22-04-2016 APT61_RS12915 adc6fb40e7ed15a8725d01c00fc7f4b5 136 PANTHER PTHR12418 2 136 9.0E-51 T 22-04-2016 APT61_RS12915 adc6fb40e7ed15a8725d01c00fc7f4b5 136 SUPERFAMILY SSF54637 6 135 6.93E-30 T 22-04-2016 IPR029069 HotDog domain APT61_RS12915 adc6fb40e7ed15a8725d01c00fc7f4b5 136 Pfam PF03061 Thioesterase superfamily 50 127 2.1E-16 T 22-04-2016 IPR006683 Thioesterase domain APT61_RS12915 adc6fb40e7ed15a8725d01c00fc7f4b5 136 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 45.031 T 22-04-2016 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 APT61_RS06375 06f3c46f361ca3465cc7087a42900892 332 PANTHER PTHR18640:SF9 1 327 4.5E-125 T 22-04-2016 APT61_RS06375 06f3c46f361ca3465cc7087a42900892 332 PIRSF PIRSF026166 1 332 3.5E-133 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter APT61_RS06375 06f3c46f361ca3465cc7087a42900892 332 PANTHER PTHR18640 1 327 4.5E-125 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter APT61_RS06375 06f3c46f361ca3465cc7087a42900892 332 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 316 9.6E-102 T 22-04-2016 IPR016833 Putative sodium bile acid cotransporter APT61_RS16645 bb8914397faa07500785b72507f99eaa 334 PANTHER PTHR30472 9 334 3.2E-165 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS16645 bb8914397faa07500785b72507f99eaa 334 SUPERFAMILY SSF81345 9 328 4.45E-75 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS16645 bb8914397faa07500785b72507f99eaa 334 Gene3D G3DSA:1.10.3470.10 10 331 4.1E-97 T 22-04-2016 IPR029022 ABC transporter, BtuC-like APT61_RS16645 bb8914397faa07500785b72507f99eaa 334 PANTHER PTHR30472:SF31 9 334 3.2E-165 T 22-04-2016 APT61_RS16645 bb8914397faa07500785b72507f99eaa 334 Pfam PF01032 FecCD transport family 19 328 3.8E-89 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 APT61_RS04765 43874c2d670ac9d83f3e5db559c64480 76 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 11 69 3.1E-17 T 22-04-2016 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 APT61_RS13650 82bca9f6e7d6a7fa17ae6619fc9bc6a5 699 Pfam PF05876 Phage terminase large subunit (GpA) 34 644 4.0E-185 T 22-04-2016 IPR008866 Bacteriophage lambda, GpA APT61_RS13650 82bca9f6e7d6a7fa17ae6619fc9bc6a5 699 PANTHER PTHR34413:SF2 3 644 0.0 T 22-04-2016 APT61_RS13650 82bca9f6e7d6a7fa17ae6619fc9bc6a5 699 PANTHER PTHR34413 3 644 0.0 T 22-04-2016 APT61_RS15245 c139b0f4bf2676eea3cfa33a2af493dd 207 SUPERFAMILY SSF51206 41 114 3.54E-5 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like APT61_RS15245 c139b0f4bf2676eea3cfa33a2af493dd 207 Pfam PF15977 Winged helix-turn-helix DNA binding 138 205 8.9E-21 T 22-04-2016 APT61_RS14685 6e161c73298ea689c84d9ff7e5ec0171 294 SUPERFAMILY SSF48179 164 292 1.1E-33 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 APT61_RS14685 6e161c73298ea689c84d9ff7e5ec0171 294 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 163 2.8E-41 T 22-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 APT61_RS14685 6e161c73298ea689c84d9ff7e5ec0171 294 Gene3D G3DSA:3.40.50.720 3 167 3.9E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS14685 6e161c73298ea689c84d9ff7e5ec0171 294 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 284 1.5E-27 T 22-04-2016 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 APT61_RS14685 6e161c73298ea689c84d9ff7e5ec0171 294 SUPERFAMILY SSF51735 5 164 4.04E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS14685 6e161c73298ea689c84d9ff7e5ec0171 294 PIRSF PIRSF000103 1 292 1.8E-70 T 22-04-2016 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 APT61_RS14685 6e161c73298ea689c84d9ff7e5ec0171 294 PANTHER PTHR22981 1 294 3.7E-85 T 22-04-2016 APT61_RS14685 6e161c73298ea689c84d9ff7e5ec0171 294 Gene3D G3DSA:1.10.1040.10 168 291 5.1E-36 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 APT61_RS10345 c19a82993b1c5df68b44d8dab0d73fed 161 PANTHER PTHR13947 57 149 1.0E-14 T 22-04-2016 APT61_RS10345 c19a82993b1c5df68b44d8dab0d73fed 161 SUPERFAMILY SSF55729 51 159 6.85E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS10345 c19a82993b1c5df68b44d8dab0d73fed 161 Gene3D G3DSA:3.40.630.30 45 160 2.5E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS10345 c19a82993b1c5df68b44d8dab0d73fed 161 Pfam PF00583 Acetyltransferase (GNAT) family 67 139 3.9E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS17760 f3d820bf19ff8ca53a031256b2ee284f 162 SUPERFAMILY SSF50891 48 160 9.86E-24 T 22-04-2016 IPR029000 Cyclophilin-like domain APT61_RS01985 b0c732ad365766f1f117d82b5bd6b58a 194 PANTHER PTHR10516 1 83 7.5E-68 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APT61_RS01985 b0c732ad365766f1f117d82b5bd6b58a 194 PANTHER PTHR10516 129 190 7.5E-68 T 22-04-2016 IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type APT61_RS01985 b0c732ad365766f1f117d82b5bd6b58a 194 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 2.2E-9 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 APT61_RS01985 b0c732ad365766f1f117d82b5bd6b58a 194 PANTHER PTHR10516:SF316 1 83 7.5E-68 T 22-04-2016 APT61_RS01985 b0c732ad365766f1f117d82b5bd6b58a 194 PANTHER PTHR10516:SF316 129 190 7.5E-68 T 22-04-2016 APT61_RS01985 b0c732ad365766f1f117d82b5bd6b58a 194 SUPERFAMILY SSF54534 2 140 4.12E-33 T 22-04-2016 APT61_RS01985 b0c732ad365766f1f117d82b5bd6b58a 194 Gene3D G3DSA:3.10.50.40 2 80 1.2E-15 T 22-04-2016 APT61_RS01985 b0c732ad365766f1f117d82b5bd6b58a 194 Gene3D G3DSA:3.10.50.40 126 141 1.2E-15 T 22-04-2016 APT61_RS09460 2dd97fb8bd3cbe2a6ff6fd213fe553d6 247 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 247 23.014 T 22-04-2016 IPR009627 Uncharacterised protein family UPF0259 APT61_RS09460 2dd97fb8bd3cbe2a6ff6fd213fe553d6 247 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 244 8.2E-94 T 22-04-2016 IPR009627 Uncharacterised protein family UPF0259 APT61_RS02165 e41fadd125fd2bfb4cc7f9fbf73a584c 118 Gene3D G3DSA:4.10.910.10 72 118 5.3E-28 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal APT61_RS02165 e41fadd125fd2bfb4cc7f9fbf73a584c 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.0E-53 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02165 e41fadd125fd2bfb4cc7f9fbf73a584c 118 Gene3D G3DSA:1.10.8.50 2 71 2.1E-27 T 22-04-2016 APT61_RS02165 e41fadd125fd2bfb4cc7f9fbf73a584c 118 PANTHER PTHR10871 2 118 7.4E-70 T 22-04-2016 APT61_RS02165 e41fadd125fd2bfb4cc7f9fbf73a584c 118 SUPERFAMILY SSF46946 2 114 1.77E-45 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 APT61_RS02165 e41fadd125fd2bfb4cc7f9fbf73a584c 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 2.0E-34 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02165 e41fadd125fd2bfb4cc7f9fbf73a584c 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 APT61_RS02165 e41fadd125fd2bfb4cc7f9fbf73a584c 118 PIRSF PIRSF002134 1 118 1.3E-41 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS02165 e41fadd125fd2bfb4cc7f9fbf73a584c 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.683 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 APT61_RS14070 51f422ded8e312f1663f273c1aac7b83 251 PANTHER PTHR30435:SF18 1 251 1.3E-119 T 22-04-2016 APT61_RS14070 51f422ded8e312f1663f273c1aac7b83 251 Pfam PF00460 Flagella basal body rod protein 5 35 2.0E-10 T 22-04-2016 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 APT61_RS14070 51f422ded8e312f1663f273c1aac7b83 251 PANTHER PTHR30435 1 251 1.3E-119 T 22-04-2016 APT61_RS14070 51f422ded8e312f1663f273c1aac7b83 251 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 22-04-2016 IPR019776 Flagellar basal body rod protein, conserved site APT61_RS14070 51f422ded8e312f1663f273c1aac7b83 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 171 247 1.1E-21 T 22-04-2016 IPR010930 Flagellar basal-body/hook protein, C-terminal domain APT61_RS14070 51f422ded8e312f1663f273c1aac7b83 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 5.1E-32 T 22-04-2016 IPR020013 Fagellar hook-basal body protein, FlgE/F/G APT61_RS14070 51f422ded8e312f1663f273c1aac7b83 251 SUPERFAMILY SSF117143 77 209 2.09E-17 T 22-04-2016 APT61_RS16180 8444b2f2320b6f8bed3584b9273460db 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 3.5E-34 T 22-04-2016 IPR019663 Uncharacterised protein YbfA APT61_RS05625 ae13eaa1cdf525f1a6bbf345194f7224 124 Pfam PF10973 Protein of unknown function (DUF2799) 31 114 3.2E-19 T 22-04-2016 IPR021242 Protein of unknown function DUF2799 APT61_RS12345 8a902a5c6767bcd65e59fcc59068221d 357 Pfam PF04233 Phage Mu protein F like protein 153 273 9.4E-7 T 22-04-2016 IPR006528 Phage head morphogenesis domain APT61_RS12345 8a902a5c6767bcd65e59fcc59068221d 357 PIRSF PIRSF034565 7 357 2.5E-118 T 22-04-2016 IPR017029 Putative phage head morphogenesis protein APT61_RS12500 b3bc0cc34d5b7062507400a571072df6 346 Pfam PF03837 RecT family 36 201 1.3E-26 T 22-04-2016 IPR018330 RecT family GO:0003677|GO:0006259 APT61_RS20460 8238b40852fcb83e9573dfbe27f9f096 48 Pfam PF08085 Entericidin EcnA/B family 23 43 3.7E-9 T 22-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 APT61_RS17550 acecf2792cdea70464891dcc4729db50 63 Pfam PF16362 YaiA protein 1 62 3.0E-40 T 22-04-2016 IPR032303 YaiA protein APT61_RS16585 558cb1de9bf66d8139241c7152754165 65 Pfam PF04328 Protein of unknown function (DUF466) 5 65 1.6E-28 T 22-04-2016 IPR007423 Protein of unknown function DUF466 APT61_RS16585 558cb1de9bf66d8139241c7152754165 65 PANTHER PTHR38453:SF2 1 65 1.2E-41 T 22-04-2016 APT61_RS16585 558cb1de9bf66d8139241c7152754165 65 PANTHER PTHR38453 1 65 1.2E-41 T 22-04-2016 APT61_RS21865 24159bcf82bb2174abaf0dad33c503ab 219 SUPERFAMILY SSF48498 99 218 7.79E-19 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal APT61_RS21865 24159bcf82bb2174abaf0dad33c503ab 219 SUPERFAMILY SSF46689 23 99 2.26E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 APT61_RS21865 24159bcf82bb2174abaf0dad33c503ab 219 Gene3D G3DSA:1.10.357.10 17 217 2.6E-40 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 APT61_RS21865 24159bcf82bb2174abaf0dad33c503ab 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 79 1.0E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS21865 24159bcf82bb2174abaf0dad33c503ab 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 46 4.2E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS21865 24159bcf82bb2174abaf0dad33c503ab 219 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 54 77 4.2E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 APT61_RS21865 24159bcf82bb2174abaf0dad33c503ab 219 PANTHER PTHR30055 15 219 3.5E-29 T 22-04-2016 APT61_RS03120 8cdb203bc7e341b89b27cb12b671f797 343 PANTHER PTHR32196:SF29 1 324 1.1E-147 T 22-04-2016 APT61_RS03120 8cdb203bc7e341b89b27cb12b671f797 343 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 300 5.2E-45 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS03120 8cdb203bc7e341b89b27cb12b671f797 343 PANTHER PTHR32196 1 324 1.1E-147 T 22-04-2016 APT61_RS08245 4d789a2fc3a309ecaabefcd2b8ef3ee7 326 PANTHER PTHR32196:SF35 8 320 6.8E-106 T 22-04-2016 APT61_RS08245 4d789a2fc3a309ecaabefcd2b8ef3ee7 326 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 308 3.5E-39 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS08245 4d789a2fc3a309ecaabefcd2b8ef3ee7 326 PANTHER PTHR32196 8 320 6.8E-106 T 22-04-2016 APT61_RS06220 c8f9b73aef1bc1c9f6c34bc7a41c3677 65 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 62 3.9E-34 T 22-04-2016 IPR020910 Uncharacterised protein family UPF0370 APT61_RS06220 c8f9b73aef1bc1c9f6c34bc7a41c3677 65 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 63 27.67 T 22-04-2016 IPR020910 Uncharacterised protein family UPF0370 APT61_RS07895 1b82c1bf48897bcc3b93d25550488e59 352 PANTHER PTHR30509 1 351 1.6E-251 T 22-04-2016 APT61_RS07895 1b82c1bf48897bcc3b93d25550488e59 352 Pfam PF04632 Fusaric acid resistance protein family 21 336 4.6E-17 T 22-04-2016 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 APT61_RS07895 1b82c1bf48897bcc3b93d25550488e59 352 PANTHER PTHR30509:SF5 1 351 1.6E-251 T 22-04-2016 APT61_RS19470 5c8c4d1fbd684a5e024e5fb72120be2d 299 Pfam PF08279 HTH domain 12 50 2.6E-5 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 APT61_RS19470 5c8c4d1fbd684a5e024e5fb72120be2d 299 Pfam PF13280 WYL domain 128 290 2.6E-22 T 22-04-2016 IPR026881 WYL domain APT61_RS19470 5c8c4d1fbd684a5e024e5fb72120be2d 299 Gene3D G3DSA:1.10.10.10 9 50 3.6E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19675 747139795a7d362bae36191f3110c526 122 SUPERFAMILY SSF52172 3 120 1.41E-27 T 22-04-2016 IPR011006 CheY-like superfamily APT61_RS19675 747139795a7d362bae36191f3110c526 122 Pfam PF00072 Response regulator receiver domain 5 116 1.4E-20 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS19675 747139795a7d362bae36191f3110c526 122 PANTHER PTHR26402 3 120 2.6E-27 T 22-04-2016 APT61_RS19675 747139795a7d362bae36191f3110c526 122 Gene3D G3DSA:3.40.50.2300 3 121 1.1E-25 T 22-04-2016 APT61_RS19675 747139795a7d362bae36191f3110c526 122 SMART SM00448 3 116 3.1E-23 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 APT61_RS19675 747139795a7d362bae36191f3110c526 122 PANTHER PTHR26402:SF613 3 120 2.6E-27 T 22-04-2016 APT61_RS17815 3faeef25c79399966cddec3a6f7a1a82 303 SUPERFAMILY SSF103481 189 290 1.83E-8 T 22-04-2016 APT61_RS17815 3faeef25c79399966cddec3a6f7a1a82 303 Pfam PF00892 EamA-like transporter family 161 285 1.3E-9 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS17815 3faeef25c79399966cddec3a6f7a1a82 303 PANTHER PTHR12715:SF7 4 291 9.8E-112 T 22-04-2016 APT61_RS17815 3faeef25c79399966cddec3a6f7a1a82 303 PANTHER PTHR12715 4 291 9.8E-112 T 22-04-2016 APT61_RS16785 027a464604ec44031028846c5bf39e9e 234 Pfam PF00005 ABC transporter 21 167 5.7E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 APT61_RS16785 027a464604ec44031028846c5bf39e9e 234 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 APT61_RS16785 027a464604ec44031028846c5bf39e9e 234 SUPERFAMILY SSF52540 3 224 1.78E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16785 027a464604ec44031028846c5bf39e9e 234 SMART SM00382 28 230 1.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain APT61_RS16785 027a464604ec44031028846c5bf39e9e 234 PANTHER PTHR24220:SF81 5 226 2.1E-92 T 22-04-2016 APT61_RS16785 027a464604ec44031028846c5bf39e9e 234 Gene3D G3DSA:3.40.50.300 2 226 8.4E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS16785 027a464604ec44031028846c5bf39e9e 234 PANTHER PTHR24220 5 226 2.1E-92 T 22-04-2016 APT61_RS10410 cbcded24f157dc9112a611e563608839 398 Gene3D G3DSA:1.20.1250.20 25 190 9.0E-10 T 22-04-2016 APT61_RS10410 cbcded24f157dc9112a611e563608839 398 Gene3D G3DSA:1.20.1250.20 214 387 7.6E-13 T 22-04-2016 APT61_RS10410 cbcded24f157dc9112a611e563608839 398 PANTHER PTHR23534 13 387 1.5E-69 T 22-04-2016 APT61_RS10410 cbcded24f157dc9112a611e563608839 398 SUPERFAMILY SSF103473 13 387 5.75E-38 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS10410 cbcded24f157dc9112a611e563608839 398 Pfam PF07690 Major Facilitator Superfamily 22 356 4.0E-26 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS17010 f2e2208726136a46dacebdc1b7819080 356 PANTHER PTHR30401:SF0 1 356 7.5E-192 T 22-04-2016 APT61_RS17010 f2e2208726136a46dacebdc1b7819080 356 SUPERFAMILY SSF52821 7 63 7.78E-18 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS17010 f2e2208726136a46dacebdc1b7819080 356 SUPERFAMILY SSF52821 91 152 7.78E-18 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS17010 f2e2208726136a46dacebdc1b7819080 356 SMART SM00450 1 131 4.6E-6 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS17010 f2e2208726136a46dacebdc1b7819080 356 Gene3D G3DSA:3.40.250.10 9 129 2.0E-28 T 22-04-2016 IPR001763 Rhodanese-like domain APT61_RS17010 f2e2208726136a46dacebdc1b7819080 356 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 14 341 3.1E-100 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 APT61_RS17010 f2e2208726136a46dacebdc1b7819080 356 PANTHER PTHR30401 1 356 7.5E-192 T 22-04-2016 APT61_RS17010 f2e2208726136a46dacebdc1b7819080 356 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 1 356 46.389 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 APT61_RS03815 502eed559de90d03b6321bbb95a9a91b 289 PANTHER PTHR11260 19 261 5.9E-156 T 22-04-2016 APT61_RS03815 502eed559de90d03b6321bbb95a9a91b 289 Gene3D G3DSA:1.20.1050.10 132 255 4.6E-42 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS03815 502eed559de90d03b6321bbb95a9a91b 289 PANTHER PTHR11260:SF258 19 261 5.9E-156 T 22-04-2016 APT61_RS03815 502eed559de90d03b6321bbb95a9a91b 289 SUPERFAMILY SSF52833 38 132 6.83E-17 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS03815 502eed559de90d03b6321bbb95a9a91b 289 SUPERFAMILY SSF47616 134 280 1.35E-31 T 22-04-2016 IPR010987 Glutathione S-transferase, C-terminal-like APT61_RS03815 502eed559de90d03b6321bbb95a9a91b 289 Pfam PF02798 Glutathione S-transferase, N-terminal domain 48 128 7.9E-6 T 22-04-2016 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 APT61_RS03815 502eed559de90d03b6321bbb95a9a91b 289 Pfam PF13410 Glutathione S-transferase, C-terminal domain 175 245 2.8E-10 T 22-04-2016 APT61_RS03815 502eed559de90d03b6321bbb95a9a91b 289 Gene3D G3DSA:3.40.30.10 34 131 1.2E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold APT61_RS19330 187605e19d118df0e035e446a10a7a6f 264 Hamap MF_01292 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase [hpcH]. 1 263 64.475 T 22-04-2016 IPR023701 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase, Enterobacteriales GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52|UniPathway: UPA00208 APT61_RS19330 187605e19d118df0e035e446a10a7a6f 264 TIGRFAM TIGR02311 HpaI: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 3 250 1.9E-129 T 22-04-2016 IPR012689 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase GO:0010124|GO:0018802 KEGG: 00350+4.1.2.52|UniPathway: UPA00208 APT61_RS19330 187605e19d118df0e035e446a10a7a6f 264 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 240 1.4E-66 T 22-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 APT61_RS19330 187605e19d118df0e035e446a10a7a6f 264 PANTHER PTHR30502:SF5 1 238 1.0E-107 T 22-04-2016 APT61_RS19330 187605e19d118df0e035e446a10a7a6f 264 Gene3D G3DSA:3.20.20.60 1 249 6.8E-83 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS19330 187605e19d118df0e035e446a10a7a6f 264 SUPERFAMILY SSF51621 2 249 2.09E-83 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 APT61_RS19330 187605e19d118df0e035e446a10a7a6f 264 PANTHER PTHR30502 1 238 1.0E-107 T 22-04-2016 APT61_RS08305 00b23d95f98eee87e6a3d9fef63d95c4 222 PANTHER PTHR33747:SF2 1 222 1.2E-109 T 22-04-2016 APT61_RS08305 00b23d95f98eee87e6a3d9fef63d95c4 222 Pfam PF02810 SEC-C motif 204 221 4.4E-10 T 22-04-2016 IPR004027 SEC-C motif APT61_RS08305 00b23d95f98eee87e6a3d9fef63d95c4 222 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 10 183 9.8E-44 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 APT61_RS08305 00b23d95f98eee87e6a3d9fef63d95c4 222 SUPERFAMILY SSF103642 201 221 9.48E-8 T 22-04-2016 APT61_RS08305 00b23d95f98eee87e6a3d9fef63d95c4 222 Gene3D G3DSA:3.10.450.50 180 220 1.7E-12 T 22-04-2016 IPR032710 NTF2-like domain APT61_RS08305 00b23d95f98eee87e6a3d9fef63d95c4 222 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 183 7.0E-35 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 APT61_RS08305 00b23d95f98eee87e6a3d9fef63d95c4 222 PANTHER PTHR33747 1 222 1.2E-109 T 22-04-2016 APT61_RS08305 00b23d95f98eee87e6a3d9fef63d95c4 222 SUPERFAMILY SSF101327 14 182 5.49E-25 T 22-04-2016 IPR011978 Uncharacterised protein family UPF0149 APT61_RS04565 34ad767c26070611debbe3c1bbc8265b 181 Pfam PF07348 Syd protein (SUKH-2) 7 179 8.8E-68 T 22-04-2016 IPR009948 Syd GO:0009898 APT61_RS04565 34ad767c26070611debbe3c1bbc8265b 181 Hamap MF_01104 Protein Syd [syd]. 3 181 33.808 T 22-04-2016 IPR009948 Syd GO:0009898 APT61_RS05070 d4f191f6dfde9972e7aff400407f6276 339 PANTHER PTHR31611 12 330 3.3E-105 T 22-04-2016 APT61_RS05070 d4f191f6dfde9972e7aff400407f6276 339 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 45 321 3.3E-120 T 22-04-2016 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 APT61_RS05070 d4f191f6dfde9972e7aff400407f6276 339 Pfam PF03824 High-affinity nickel-transport protein 41 325 2.3E-87 T 22-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 APT61_RS08640 2efb9a3304e97fea6d153efc47ba3f75 117 Pfam PF13995 YebF-like protein 25 112 7.4E-40 T 22-04-2016 IPR025603 YebF/Colicin-M immunity protein APT61_RS08640 2efb9a3304e97fea6d153efc47ba3f75 117 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 24 112 2.0E-35 T 22-04-2016 IPR025603 YebF/Colicin-M immunity protein APT61_RS07050 9012b4bc73c52e8e6231c2659b1dd4a6 409 PANTHER PTHR11814:SF76 15 388 1.6E-141 T 22-04-2016 APT61_RS07050 9012b4bc73c52e8e6231c2659b1dd4a6 409 PANTHER PTHR11814 15 388 1.6E-141 T 22-04-2016 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 Reactome: REACT_15518 APT61_RS07050 9012b4bc73c52e8e6231c2659b1dd4a6 409 Pfam PF00916 Sulfate permease family 153 345 3.0E-22 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 APT61_RS07050 9012b4bc73c52e8e6231c2659b1dd4a6 409 Pfam PF00916 Sulfate permease family 24 146 2.5E-16 T 22-04-2016 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 APT61_RS21145 77e36327313693367a6a5ac66ad9945f 165 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 147 6.6E-54 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 APT61_RS21145 77e36327313693367a6a5ac66ad9945f 165 Hamap MF_01181 Regulator of sigma D [rsd]. 1 151 41.195 T 22-04-2016 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd APT61_RS21145 77e36327313693367a6a5ac66ad9945f 165 PIRSF PIRSF016548 1 159 3.1E-56 T 22-04-2016 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 APT61_RS13680 1e9c3e0f801eb911baca129db3d12991 76 Pfam PF04971 Bacteriophage P21 holin S 1 56 2.3E-10 T 22-04-2016 IPR007054 Lysis protein S APT61_RS18865 4628355aea0c21353f8452be9acd009d 272 Hamap MF_01153 DnaJ-like protein DjlA [djlA]. 1 272 39.585 T 22-04-2016 IPR023749 Co-chaperone DjlA GO:0051087 APT61_RS18865 4628355aea0c21353f8452be9acd009d 272 Gene3D G3DSA:1.10.287.110 210 268 1.8E-14 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18865 4628355aea0c21353f8452be9acd009d 272 SMART SM00271 205 270 9.4E-16 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18865 4628355aea0c21353f8452be9acd009d 272 Pfam PF05099 Tellurite resistance protein TerB 47 170 8.2E-10 T 22-04-2016 IPR007791 Co-chaperone DjlA, N-terminal APT61_RS18865 4628355aea0c21353f8452be9acd009d 272 PRINTS PR00625 DnaJ domain signature 250 270 1.3E-7 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18865 4628355aea0c21353f8452be9acd009d 272 PRINTS PR00625 DnaJ domain signature 226 241 1.3E-7 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18865 4628355aea0c21353f8452be9acd009d 272 PRINTS PR00625 DnaJ domain signature 208 226 1.3E-7 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18865 4628355aea0c21353f8452be9acd009d 272 Pfam PF00226 DnaJ domain 209 267 2.1E-10 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18865 4628355aea0c21353f8452be9acd009d 272 SUPERFAMILY SSF46565 131 268 2.93E-31 T 22-04-2016 IPR001623 DnaJ domain APT61_RS18865 4628355aea0c21353f8452be9acd009d 272 Gene3D G3DSA:1.10.3680.10 22 209 3.2E-26 T 22-04-2016 IPR029024 TerB-like APT61_RS20925 c4e6c1cabc54968f1340999ba7708f11 162 SUPERFAMILY SSF51182 3 146 5.03E-21 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS20925 c4e6c1cabc54968f1340999ba7708f11 162 PANTHER PTHR35848 39 131 1.1E-13 T 22-04-2016 APT61_RS20925 c4e6c1cabc54968f1340999ba7708f11 162 Gene3D G3DSA:2.60.120.10 34 127 1.5E-19 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS20925 c4e6c1cabc54968f1340999ba7708f11 162 Pfam PF07883 Cupin domain 47 118 1.6E-17 T 22-04-2016 IPR013096 Cupin 2, conserved barrel APT61_RS20925 c4e6c1cabc54968f1340999ba7708f11 162 PANTHER PTHR35848:SF2 39 131 1.1E-13 T 22-04-2016 APT61_RS01470 f3f0a1ecaee496ab8a894ea3dd821974 119 Pfam PF10694 Protein of unknown function (DUF2500) 5 116 9.1E-31 T 22-04-2016 IPR019635 Protein of unknown function DUF2500 APT61_RS17505 768cb197c1ac17d5ce94e2d287f8ac4f 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 4.1E-161 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APT61_RS17505 768cb197c1ac17d5ce94e2d287f8ac4f 439 PANTHER PTHR30588:SF0 2 439 3.6E-231 T 22-04-2016 APT61_RS17505 768cb197c1ac17d5ce94e2d287f8ac4f 439 PANTHER PTHR30588 2 439 3.6E-231 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APT61_RS17505 768cb197c1ac17d5ce94e2d287f8ac4f 439 Pfam PF05525 Branched-chain amino acid transport protein 7 429 3.1E-158 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 APT61_RS11050 aae5fad64eac0d26031a207bb1a3fb20 368 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 351 6.3E-49 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS11050 aae5fad64eac0d26031a207bb1a3fb20 368 PANTHER PTHR30482 19 360 2.2E-107 T 22-04-2016 APT61_RS11050 aae5fad64eac0d26031a207bb1a3fb20 368 PANTHER PTHR30482:SF10 19 360 2.2E-107 T 22-04-2016 APT61_RS07295 fac259fd322a17db5306f7687d7791cd 72 Pfam PF11903 ParD-like antitoxin of type II bacterial toxin-antitoxin system 1 61 4.3E-25 T 22-04-2016 IPR021831 ParD-like antitoxin of type II bacterial toxin-antitoxin system APT61_RS13640 e06c56676f5fa007b925f0df28d78b7b 501 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 31 475 3.7E-149 T 22-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 APT61_RS13640 e06c56676f5fa007b925f0df28d78b7b 501 Pfam PF05136 Phage portal protein, lambda family 36 367 1.3E-83 T 22-04-2016 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 APT61_RS06205 7c05478c11b2017ac73cc03a0f25fef1 287 Pfam PF04228 Putative neutral zinc metallopeptidase 1 283 4.1E-138 T 22-04-2016 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative APT61_RS06205 7c05478c11b2017ac73cc03a0f25fef1 287 PANTHER PTHR30168 2 287 7.6E-153 T 22-04-2016 APT61_RS11120 6d7a0b2fa250096e978a1ddb7507dcda 199 PANTHER PTHR10204:SF0 8 199 9.9E-46 T 22-04-2016 APT61_RS11120 6d7a0b2fa250096e978a1ddb7507dcda 199 SUPERFAMILY SSF52218 9 198 1.45E-49 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS11120 6d7a0b2fa250096e978a1ddb7507dcda 199 PANTHER PTHR10204 8 199 9.9E-46 T 22-04-2016 APT61_RS11120 6d7a0b2fa250096e978a1ddb7507dcda 199 Gene3D G3DSA:3.40.50.360 9 198 8.0E-49 T 22-04-2016 IPR029039 Flavoprotein-like domain APT61_RS11120 6d7a0b2fa250096e978a1ddb7507dcda 199 Pfam PF02525 Flavodoxin-like fold 9 194 7.6E-44 T 22-04-2016 IPR003680 Flavodoxin-like fold APT61_RS05235 ea1718394a7642366b4d3785801ca46a 166 Pfam PF15601 Immunity protein 70 12 89 1.7E-16 T 22-04-2016 IPR028185 Immunity protein 70 APT61_RS08680 da4124f32b4663c62db4300112bbc9bc 112 Pfam PF10709 Protein of unknown function (DUF2511) 25 112 1.8E-42 T 22-04-2016 IPR019648 Protein of unknown function DUF2511 APT61_RS18310 274766610e951aaaad0003e4a2a63559 208 PANTHER PTHR30506:SF3 1 208 8.0E-97 T 22-04-2016 APT61_RS18310 274766610e951aaaad0003e4a2a63559 208 PANTHER PTHR30506 1 208 8.0E-97 T 22-04-2016 APT61_RS18310 274766610e951aaaad0003e4a2a63559 208 Pfam PF03458 UPF0126 domain 92 164 2.0E-18 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 APT61_RS18310 274766610e951aaaad0003e4a2a63559 208 Pfam PF03458 UPF0126 domain 4 78 3.4E-23 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 APT61_RS06875 e46af1577af63692ce4bd565249365e4 100 PANTHER PTHR11434 3 100 5.3E-65 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APT61_RS06875 e46af1577af63692ce4bd565249365e4 100 PANTHER PTHR11434:SF4 3 100 5.3E-65 T 22-04-2016 APT61_RS06875 e46af1577af63692ce4bd565249365e4 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.566 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APT61_RS06875 e46af1577af63692ce4bd565249365e4 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 3.0E-21 T 22-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 APT61_RS15310 fa055ef7a08bc72177fd54f8f194d93b 281 Gene3D G3DSA:1.10.3720.10 11 271 2.4E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15310 fa055ef7a08bc72177fd54f8f194d93b 281 PANTHER PTHR30222 15 279 1.8E-89 T 22-04-2016 APT61_RS15310 fa055ef7a08bc72177fd54f8f194d93b 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 262 1.4E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15310 fa055ef7a08bc72177fd54f8f194d93b 281 PANTHER PTHR30222:SF1 15 279 1.8E-89 T 22-04-2016 APT61_RS15310 fa055ef7a08bc72177fd54f8f194d93b 281 SUPERFAMILY SSF161098 8 267 2.34E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS20260 72a5b6823933089eef4c895e98471830 466 Pfam PF03611 PTS system sugar-specific permease component 15 410 1.2E-123 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 APT61_RS20260 72a5b6823933089eef4c895e98471830 466 PANTHER PTHR33843:SF5 2 461 0.0 T 22-04-2016 APT61_RS20260 72a5b6823933089eef4c895e98471830 466 PANTHER PTHR33843 2 461 0.0 T 22-04-2016 APT61_RS00705 4f138d0e923aa2b980a87d9f0f165e3b 119 Pfam PF07226 Protein of unknown function (DUF1422) 3 115 1.2E-52 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 APT61_RS00705 4f138d0e923aa2b980a87d9f0f165e3b 119 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 119 4.0E-57 T 22-04-2016 IPR009867 Protein of unknown function DUF1422 APT61_RS15165 b33cbccd41fca1bc636d0d3eb5c9d126 147 PANTHER PTHR11407:SF34 4 104 1.4E-13 T 22-04-2016 APT61_RS15165 b33cbccd41fca1bc636d0d3eb5c9d126 147 SUPERFAMILY SSF53955 15 141 9.12E-36 T 22-04-2016 IPR023346 Lysozyme-like domain APT61_RS15165 b33cbccd41fca1bc636d0d3eb5c9d126 147 Gene3D G3DSA:1.10.530.10 16 142 1.5E-21 T 22-04-2016 APT61_RS15165 b33cbccd41fca1bc636d0d3eb5c9d126 147 Pfam PF01464 Transglycosylase SLT domain 19 129 3.5E-29 T 22-04-2016 IPR008258 Transglycosylase SLT domain 1 APT61_RS15165 b33cbccd41fca1bc636d0d3eb5c9d126 147 PANTHER PTHR11407 4 104 1.4E-13 T 22-04-2016 APT61_RS20500 2dbcf347f64593391103e7c7a67344ae 156 PANTHER PTHR35335 1 156 1.1E-41 T 22-04-2016 APT61_RS20500 2dbcf347f64593391103e7c7a67344ae 156 PANTHER PTHR35335:SF1 1 156 1.1E-41 T 22-04-2016 APT61_RS20500 2dbcf347f64593391103e7c7a67344ae 156 Pfam PF04186 FxsA cytoplasmic membrane protein 8 110 9.2E-34 T 22-04-2016 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 APT61_RS19435 28cec81a35f439eb93bf2a16de94d03b 341 SUPERFAMILY SSF53756 125 337 7.53E-9 T 22-04-2016 APT61_RS14245 e0064b8d54a36061b0b63e2da2d83e95 138 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 6 128 2.6E-33 T 22-04-2016 IPR018893 Type VIII secretion system, CsgF APT61_RS14225 d07c8d9471f54cf6b7784fe6797fa4e8 151 Pfam PF07012 Curlin associated repeat 86 119 1.8E-7 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 APT61_RS03280 142204a5778115362040eeac8455be61 77 Pfam PF06183 DinI-like family 15 76 1.6E-22 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APT61_RS03280 142204a5778115362040eeac8455be61 77 Gene3D G3DSA:3.30.910.10 1 77 5.0E-28 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APT61_RS03280 142204a5778115362040eeac8455be61 77 PANTHER PTHR36572 1 77 3.8E-30 T 22-04-2016 APT61_RS03280 142204a5778115362040eeac8455be61 77 PANTHER PTHR36572:SF2 1 77 3.8E-30 T 22-04-2016 APT61_RS03280 142204a5778115362040eeac8455be61 77 SUPERFAMILY SSF54857 1 77 1.27E-22 T 22-04-2016 IPR010391 DNA damage-inducible protein DinI-like APT61_RS03595 261b2762138e0a5218a6dcd681d415ad 224 Pfam PF06693 Protein of unknown function (DUF1190) 41 210 2.9E-55 T 22-04-2016 IPR009576 Biofilm formation YgiB APT61_RS08390 f07a63ad4ef33c748c77bff340c14da2 142 Gene3D G3DSA:3.40.50.620 3 137 2.2E-24 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold APT61_RS08390 f07a63ad4ef33c748c77bff340c14da2 142 PIRSF PIRSF006276 1 141 3.0E-43 T 22-04-2016 IPR006015 Universal stress protein A APT61_RS08390 f07a63ad4ef33c748c77bff340c14da2 142 Pfam PF00582 Universal stress protein family 3 137 5.7E-16 T 22-04-2016 IPR006016 UspA GO:0006950 APT61_RS08390 f07a63ad4ef33c748c77bff340c14da2 142 SUPERFAMILY SSF52402 3 137 4.6E-24 T 22-04-2016 APT61_RS15900 037d3922f1fe83e878d87add3e20eec6 331 SUPERFAMILY SSF63825 5 119 4.45E-10 T 22-04-2016 APT61_RS15900 037d3922f1fe83e878d87add3e20eec6 331 Gene3D G3DSA:2.130.10.10 2 328 2.0E-78 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APT61_RS15900 037d3922f1fe83e878d87add3e20eec6 331 PANTHER PTHR30344 6 328 8.2E-98 T 22-04-2016 APT61_RS15900 037d3922f1fe83e878d87add3e20eec6 331 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 55.583 T 22-04-2016 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31|UniPathway: UPA00115 APT61_RS15900 037d3922f1fe83e878d87add3e20eec6 331 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 327 1.4E-85 T 22-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 APT61_RS15900 037d3922f1fe83e878d87add3e20eec6 331 PANTHER PTHR30344:SF1 6 328 8.2E-98 T 22-04-2016 APT61_RS15900 037d3922f1fe83e878d87add3e20eec6 331 SUPERFAMILY SSF50974 79 330 1.83E-48 T 22-04-2016 IPR011045 Nitrous oxide reductase, N-terminal APT61_RS01365 c6b901412c526e11e3f80381b897add9 201 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 186 3.2E-8 T 22-04-2016 IPR004564 Outer membrane lipoprotein carrier protein LolA-like APT61_RS01365 c6b901412c526e11e3f80381b897add9 201 SUPERFAMILY SSF89392 20 186 4.32E-23 T 22-04-2016 IPR029046 Lipoprotein localisation LolA/LolB/LppX APT61_RS01365 c6b901412c526e11e3f80381b897add9 201 Gene3D G3DSA:2.50.20.10 20 187 1.1E-15 T 22-04-2016 APT61_RS21720 5e14f197b4407dc097841013789d566c 205 PANTHER PTHR30506 1 205 2.8E-132 T 22-04-2016 APT61_RS21720 5e14f197b4407dc097841013789d566c 205 Pfam PF03458 UPF0126 domain 5 79 3.4E-19 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 APT61_RS21720 5e14f197b4407dc097841013789d566c 205 Pfam PF03458 UPF0126 domain 91 164 1.3E-21 T 22-04-2016 IPR005115 Uncharacterised domain UPF0126 APT61_RS21720 5e14f197b4407dc097841013789d566c 205 PANTHER PTHR30506:SF2 1 205 2.8E-132 T 22-04-2016 APT61_RS07385 1d30ea91d7efd41a95a5d6bf565701af 245 SUPERFAMILY SSF161098 46 233 9.29E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07385 1d30ea91d7efd41a95a5d6bf565701af 245 PANTHER PTHR30177 1 242 6.9E-134 T 22-04-2016 APT61_RS07385 1d30ea91d7efd41a95a5d6bf565701af 245 Gene3D G3DSA:1.10.3720.10 8 242 2.1E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07385 1d30ea91d7efd41a95a5d6bf565701af 245 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 69 239 1.1E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS07385 1d30ea91d7efd41a95a5d6bf565701af 245 PANTHER PTHR30177:SF11 1 242 6.9E-134 T 22-04-2016 APT61_RS13145 af105393d5bb073c1233f061a14d624c 304 PANTHER PTHR30562 5 288 2.9E-176 T 22-04-2016 APT61_RS13145 af105393d5bb073c1233f061a14d624c 304 SUPERFAMILY SSF82771 43 120 1.2E-9 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APT61_RS13145 af105393d5bb073c1233f061a14d624c 304 SMART SM00465 43 121 3.8E-13 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily APT61_RS13145 af105393d5bb073c1233f061a14d624c 304 PANTHER PTHR30562:SF10 5 288 2.9E-176 T 22-04-2016 APT61_RS04430 fe97fe6145510afcc3f40a4f7abfa05e 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 46.09 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APT61_RS04430 fe97fe6145510afcc3f40a4f7abfa05e 264 PANTHER PTHR11548 1 264 4.0E-200 T 22-04-2016 APT61_RS04430 fe97fe6145510afcc3f40a4f7abfa05e 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 22-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APT61_RS04430 fe97fe6145510afcc3f40a4f7abfa05e 264 Gene3D G3DSA:3.30.572.10 1 264 5.6E-136 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APT61_RS04430 fe97fe6145510afcc3f40a4f7abfa05e 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.2E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APT61_RS04430 fe97fe6145510afcc3f40a4f7abfa05e 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 2.2E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APT61_RS04430 fe97fe6145510afcc3f40a4f7abfa05e 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 2.2E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APT61_RS04430 fe97fe6145510afcc3f40a4f7abfa05e 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 2.2E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APT61_RS04430 fe97fe6145510afcc3f40a4f7abfa05e 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 2.2E-47 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APT61_RS04430 fe97fe6145510afcc3f40a4f7abfa05e 264 Pfam PF00303 Thymidylate synthase 2 264 7.1E-125 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APT61_RS04430 fe97fe6145510afcc3f40a4f7abfa05e 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 4.5E-94 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APT61_RS04430 fe97fe6145510afcc3f40a4f7abfa05e 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 5.6E-42 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APT61_RS04430 fe97fe6145510afcc3f40a4f7abfa05e 264 SUPERFAMILY SSF55831 1 264 1.96E-131 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 APT61_RS19820 0992bc6afe78c7dd76ed1654912d11b1 188 Pfam PF07455 Phage polarity suppression protein (Psu) 7 187 1.5E-56 T 22-04-2016 IPR010006 Bacteriophage P4, Psu, polarity suppression protein APT61_RS06065 6ffbc3bd9f5574c5ff4d189477c60a7f 377 SUPERFAMILY SSF103473 11 370 2.62E-36 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS06065 6ffbc3bd9f5574c5ff4d189477c60a7f 377 Gene3D G3DSA:1.20.1250.20 10 188 2.5E-21 T 22-04-2016 APT61_RS06065 6ffbc3bd9f5574c5ff4d189477c60a7f 377 Gene3D G3DSA:1.20.1250.20 199 373 3.2E-13 T 22-04-2016 APT61_RS06065 6ffbc3bd9f5574c5ff4d189477c60a7f 377 Pfam PF07690 Major Facilitator Superfamily 13 342 3.4E-21 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS21645 a0dda79343a6b4c5ee89ac3f019b2537 323 SUPERFAMILY SSF53756 243 295 5.76E-7 T 22-04-2016 APT61_RS08075 c0825f750278296dd81189235a52038b 155 PANTHER PTHR35091:SF1 1 155 2.5E-60 T 22-04-2016 APT61_RS08075 c0825f750278296dd81189235a52038b 155 Pfam PF03748 Flagellar basal body-associated protein FliL 57 153 4.6E-21 T 22-04-2016 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 APT61_RS08075 c0825f750278296dd81189235a52038b 155 PANTHER PTHR35091 1 155 2.5E-60 T 22-04-2016 APT61_RS06500 6666f869390a4b23380f87e65bc85e51 305 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 3 304 49.778 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 APT61_RS06500 6666f869390a4b23380f87e65bc85e51 305 PANTHER PTHR30606 1 304 1.0E-220 T 22-04-2016 APT61_RS06500 6666f869390a4b23380f87e65bc85e51 305 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 4 295 4.5E-101 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APT61_RS06500 6666f869390a4b23380f87e65bc85e51 305 PANTHER PTHR30606:SF7 1 304 1.0E-220 T 22-04-2016 APT61_RS06500 6666f869390a4b23380f87e65bc85e51 305 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 2 304 68.925 T 22-04-2016 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 APT61_RS06500 6666f869390a4b23380f87e65bc85e51 305 PIRSF PIRSF026649 2 304 1.3E-87 T 22-04-2016 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 APT61_RS06500 6666f869390a4b23380f87e65bc85e51 305 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 4 304 1.2E-135 T 22-04-2016 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24|UniPathway: UPA00030 APT61_RS00245 a3dbcfc91d3972269f39e6b5fffd071e 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 3.0E-75 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APT61_RS00245 a3dbcfc91d3972269f39e6b5fffd071e 145 PANTHER PTHR10472 2 144 1.1E-76 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APT61_RS00245 a3dbcfc91d3972269f39e6b5fffd071e 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 4.4E-53 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APT61_RS00245 a3dbcfc91d3972269f39e6b5fffd071e 145 SUPERFAMILY SSF69500 1 144 4.58E-57 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain APT61_RS00245 a3dbcfc91d3972269f39e6b5fffd071e 145 Gene3D G3DSA:3.50.80.10 1 144 3.4E-57 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain APT61_RS00245 a3dbcfc91d3972269f39e6b5fffd071e 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.29 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 APT61_RS01515 0be586b9ce7c59c1f5368632d4001815 180 Pfam PF04011 LemA family 8 179 3.0E-51 T 22-04-2016 IPR007156 LemA APT61_RS01515 0be586b9ce7c59c1f5368632d4001815 180 SUPERFAMILY SSF140478 25 169 1.05E-42 T 22-04-2016 IPR023353 LemA-like domain APT61_RS01515 0be586b9ce7c59c1f5368632d4001815 180 PANTHER PTHR34478 1 180 7.7E-66 T 22-04-2016 APT61_RS01515 0be586b9ce7c59c1f5368632d4001815 180 Gene3D G3DSA:1.20.1440.20 13 179 8.2E-50 T 22-04-2016 IPR023353 LemA-like domain APT61_RS01515 0be586b9ce7c59c1f5368632d4001815 180 PANTHER PTHR34478:SF2 1 180 7.7E-66 T 22-04-2016 APT61_RS06590 9e7d043ad7950a991513b18238f748d1 250 PANTHER PTHR30035:SF3 1 249 1.7E-118 T 22-04-2016 APT61_RS06590 9e7d043ad7950a991513b18238f748d1 250 PANTHER PTHR30035 1 249 1.7E-118 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APT61_RS06590 9e7d043ad7950a991513b18238f748d1 250 Pfam PF04333 MlaA lipoprotein 28 221 5.7E-66 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APT61_RS06590 9e7d043ad7950a991513b18238f748d1 250 PRINTS PR01805 VacJ lipoprotein signature 98 115 3.1E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APT61_RS06590 9e7d043ad7950a991513b18238f748d1 250 PRINTS PR01805 VacJ lipoprotein signature 29 42 3.1E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APT61_RS06590 9e7d043ad7950a991513b18238f748d1 250 PRINTS PR01805 VacJ lipoprotein signature 137 154 3.1E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APT61_RS06590 9e7d043ad7950a991513b18238f748d1 250 PRINTS PR01805 VacJ lipoprotein signature 47 63 3.1E-33 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 APT61_RS16690 c8eec5c316bc62665a0fe47c7b29c9eb 202 PIRSF PIRSF033535 3 200 7.2E-32 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein APT61_RS16690 c8eec5c316bc62665a0fe47c7b29c9eb 202 SUPERFAMILY SSF141318 48 188 5.75E-25 T 22-04-2016 APT61_RS16690 c8eec5c316bc62665a0fe47c7b29c9eb 202 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 13 188 1.9E-28 T 22-04-2016 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein APT61_RS05090 8c63d2a4d6aae8b320ab9c588bfa9188 206 Pfam PF01810 LysE type translocator 16 203 1.5E-26 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS05090 8c63d2a4d6aae8b320ab9c588bfa9188 206 PANTHER PTHR30086 3 203 3.7E-48 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS05090 8c63d2a4d6aae8b320ab9c588bfa9188 206 PIRSF PIRSF006324 1 206 5.9E-45 T 22-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 APT61_RS05090 8c63d2a4d6aae8b320ab9c588bfa9188 206 PANTHER PTHR30086:SF2 3 203 3.7E-48 T 22-04-2016 APT61_RS03585 a86c5c8ccaca66853d177e9b52ce27d5 262 SUPERFAMILY SSF53213 5 261 1.31E-90 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 APT61_RS03585 a86c5c8ccaca66853d177e9b52ce27d5 262 Gene3D G3DSA:3.40.830.10 2 262 4.6E-99 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 APT61_RS03585 a86c5c8ccaca66853d177e9b52ce27d5 262 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 259 2.0E-26 T 22-04-2016 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 APT61_RS03585 a86c5c8ccaca66853d177e9b52ce27d5 262 PANTHER PTHR30096 1 262 2.3E-100 T 22-04-2016 APT61_RS03585 a86c5c8ccaca66853d177e9b52ce27d5 262 PIRSF PIRSF006157 1 262 5.1E-93 T 22-04-2016 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type GO:0008270|GO:0016701|GO:0055114 APT61_RS03585 a86c5c8ccaca66853d177e9b52ce27d5 262 PANTHER PTHR30096:SF0 1 262 2.3E-100 T 22-04-2016 APT61_RS21640 f50aaa83d2ed6d74a9d5adbc117beb4e 327 Gene3D G3DSA:3.90.550.10 2 207 2.8E-49 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS21640 f50aaa83d2ed6d74a9d5adbc117beb4e 327 PANTHER PTHR22916 1 294 4.5E-65 T 22-04-2016 APT61_RS21640 f50aaa83d2ed6d74a9d5adbc117beb4e 327 SUPERFAMILY SSF53448 5 226 1.69E-48 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases APT61_RS21640 f50aaa83d2ed6d74a9d5adbc117beb4e 327 Pfam PF00535 Glycosyl transferase family 2 8 133 1.3E-26 T 22-04-2016 IPR001173 Glycosyltransferase 2-like APT61_RS21640 f50aaa83d2ed6d74a9d5adbc117beb4e 327 PANTHER PTHR22916:SF24 1 294 4.5E-65 T 22-04-2016 APT61_RS01850 079765786e1267fbbc3becbb40cc3f7f 108 PANTHER PTHR40562 1 108 1.3E-65 T 22-04-2016 APT61_RS01850 079765786e1267fbbc3becbb40cc3f7f 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 8.0E-42 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 APT61_RS01850 079765786e1267fbbc3becbb40cc3f7f 108 Gene3D G3DSA:2.102.10.10 2 107 2.1E-42 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APT61_RS01850 079765786e1267fbbc3becbb40cc3f7f 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 3.5E-41 T 22-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 APT61_RS01850 079765786e1267fbbc3becbb40cc3f7f 108 SUPERFAMILY SSF50022 1 107 9.85E-37 T 22-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 APT61_RS09200 688628bfd26188d98c3e6b03dd24aeb9 130 PIRSF PIRSF005610 1 125 1.9E-20 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB APT61_RS09200 688628bfd26188d98c3e6b03dd24aeb9 130 PANTHER PTHR39594 1 130 1.3E-36 T 22-04-2016 APT61_RS09200 688628bfd26188d98c3e6b03dd24aeb9 130 Pfam PF04247 Invasion gene expression up-regulator, SirB 5 126 1.0E-36 T 22-04-2016 IPR007360 Invasion gene expression up-regulator, SirB APT61_RS02495 a4c576d25f5e97aaa41a7511e1096a3d 132 PANTHER PTHR39579 1 132 2.7E-53 T 22-04-2016 APT61_RS02495 a4c576d25f5e97aaa41a7511e1096a3d 132 PIRSF PIRSF006318 1 132 5.6E-51 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 APT61_RS02495 a4c576d25f5e97aaa41a7511e1096a3d 132 Pfam PF06295 Protein of unknown function (DUF1043) 6 126 4.5E-48 T 22-04-2016 IPR009386 Protein of unknown function DUF1043 APT61_RS13910 d306e0c2022f8312d0bd7c2aa0a5827f 180 PANTHER PTHR35602:SF2 1 180 7.6E-139 T 22-04-2016 APT61_RS13910 d306e0c2022f8312d0bd7c2aa0a5827f 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 54.815 T 22-04-2016 IPR022987 Uncharacterised protein family UPF0227 APT61_RS13910 d306e0c2022f8312d0bd7c2aa0a5827f 180 Gene3D G3DSA:3.40.50.1820 2 77 2.7E-5 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS13910 d306e0c2022f8312d0bd7c2aa0a5827f 180 PANTHER PTHR35602 1 180 7.6E-139 T 22-04-2016 APT61_RS13910 d306e0c2022f8312d0bd7c2aa0a5827f 180 SUPERFAMILY SSF53474 2 176 5.46E-8 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS13910 d306e0c2022f8312d0bd7c2aa0a5827f 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 1.1E-69 T 22-04-2016 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA APT61_RS05355 778d6af0fc8d31b17b1c08188a6202a8 168 Pfam PF05974 Domain of unknown function (DUF892) 5 156 2.0E-48 T 22-04-2016 IPR010287 Domain of unknown function DUF892 APT61_RS05355 778d6af0fc8d31b17b1c08188a6202a8 168 PANTHER PTHR30565 1 168 1.6E-103 T 22-04-2016 APT61_RS05355 778d6af0fc8d31b17b1c08188a6202a8 168 SUPERFAMILY SSF47240 5 155 1.16E-44 T 22-04-2016 IPR009078 Ferritin-like superfamily APT61_RS05355 778d6af0fc8d31b17b1c08188a6202a8 168 Gene3D G3DSA:1.20.1260.10 5 159 4.2E-51 T 22-04-2016 IPR012347 Ferritin-related APT61_RS05355 778d6af0fc8d31b17b1c08188a6202a8 168 PANTHER PTHR30565:SF1 1 168 1.6E-103 T 22-04-2016 APT61_RS18890 a1418733024c9b4d152a3462dd008ef4 125 Pfam PF04379 Protein of unknown function (DUF525) 18 102 1.7E-33 T 22-04-2016 IPR007474 ApaG domain APT61_RS18890 a1418733024c9b4d152a3462dd008ef4 125 SUPERFAMILY SSF110069 5 125 2.22E-49 T 22-04-2016 IPR007474 ApaG domain APT61_RS18890 a1418733024c9b4d152a3462dd008ef4 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 33.494 T 22-04-2016 IPR023065 Uncharacterised protein family ApaG APT61_RS18890 a1418733024c9b4d152a3462dd008ef4 125 Gene3D G3DSA:2.60.40.1470 6 125 1.5E-46 T 22-04-2016 IPR007474 ApaG domain APT61_RS18890 a1418733024c9b4d152a3462dd008ef4 125 PANTHER PTHR14289 3 122 3.5E-58 T 22-04-2016 APT61_RS18155 09d064a2a7a5529f044b6491ddacf6b4 66 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 1 66 3.0E-28 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 APT61_RS18155 09d064a2a7a5529f044b6491ddacf6b4 66 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 1 66 26.414 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 APT61_RS18155 09d064a2a7a5529f044b6491ddacf6b4 66 Pfam PF06786 Uncharacterised protein family (UPF0253) 2 65 2.2E-34 T 22-04-2016 IPR009624 Uncharacterised protein family UPF0253 APT61_RS05455 d3a1a3bde97d0d303b50fa1fcd58be6d 229 SUPERFAMILY SSF51366 14 224 2.04E-52 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 APT61_RS05455 d3a1a3bde97d0d303b50fa1fcd58be6d 229 PANTHER PTHR36204 2 228 3.3E-112 T 22-04-2016 APT61_RS05455 d3a1a3bde97d0d303b50fa1fcd58be6d 229 Gene3D G3DSA:3.20.20.70 8 226 5.9E-88 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 APT61_RS05455 d3a1a3bde97d0d303b50fa1fcd58be6d 229 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 11 225 36.601 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 APT61_RS05455 d3a1a3bde97d0d303b50fa1fcd58be6d 229 PANTHER PTHR36204:SF1 2 228 3.3E-112 T 22-04-2016 APT61_RS05455 d3a1a3bde97d0d303b50fa1fcd58be6d 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 35 225 4.9E-85 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 APT61_RS09595 06601fffc9c83c96e45660587e9eaf7a 108 SUPERFAMILY SSF55159 5 104 1.11E-25 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 APT61_RS09595 06601fffc9c83c96e45660587e9eaf7a 108 Pfam PF01253 Translation initiation factor SUI1 32 101 1.9E-19 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 APT61_RS09595 06601fffc9c83c96e45660587e9eaf7a 108 Gene3D G3DSA:3.30.780.10 28 108 8.0E-35 T 22-04-2016 IPR001950 Translation initiation factor SUI1 GO:0003743|GO:0006413 APT61_RS09595 06601fffc9c83c96e45660587e9eaf7a 108 PANTHER PTHR12789 1 108 1.3E-38 T 22-04-2016 APT61_RS09595 06601fffc9c83c96e45660587e9eaf7a 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 9.7E-38 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 APT61_RS09595 06601fffc9c83c96e45660587e9eaf7a 108 PIRSF PIRSF037511 1 108 1.2E-34 T 22-04-2016 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 APT61_RS08700 40e9cba89a52a4b33b668bf1ea3a5dae 79 Pfam PF07351 Protein of unknown function (DUF1480) 1 78 9.4E-40 T 22-04-2016 IPR009950 Protein of unknown function DUF1480 APT61_RS08700 40e9cba89a52a4b33b668bf1ea3a5dae 79 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 3 79 6.0E-34 T 22-04-2016 IPR009950 Protein of unknown function DUF1480 APT61_RS17140 bd0c0b2ff67e627b96d82f08cd98a0dd 125 PANTHER PTHR35813:SF1 1 125 2.2E-49 T 22-04-2016 APT61_RS17140 bd0c0b2ff67e627b96d82f08cd98a0dd 125 Pfam PF04304 Protein of unknown function (DUF454) 3 116 2.6E-41 T 22-04-2016 IPR007401 Protein of unknown function DUF454 APT61_RS17140 bd0c0b2ff67e627b96d82f08cd98a0dd 125 PANTHER PTHR35813 1 125 2.2E-49 T 22-04-2016 APT61_RS17140 bd0c0b2ff67e627b96d82f08cd98a0dd 125 PIRSF PIRSF016789 2 123 4.5E-49 T 22-04-2016 IPR007401 Protein of unknown function DUF454 APT61_RS12460 4c076cd086d64d0117a0993124e61938 307 TIGRFAM TIGR01610 phage_O_Nterm: phage replication protein O, N-terminal domain 25 120 9.2E-28 T 22-04-2016 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 APT61_RS12460 4c076cd086d64d0117a0993124e61938 307 Pfam PF04492 Bacteriophage replication protein O 22 120 5.1E-28 T 22-04-2016 IPR006497 Bacteriophage lambda, GpO, N-terminal GO:0006260 APT61_RS03530 42ea18aec7a990369059bcfa0fcc2a44 206 Pfam PF08239 Bacterial SH3 domain 35 85 3.5E-8 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type APT61_RS03530 42ea18aec7a990369059bcfa0fcc2a44 206 SMART SM00287 23 89 6.5E-11 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type APT61_RS03530 42ea18aec7a990369059bcfa0fcc2a44 206 PIRSF PIRSF006158 1 205 3.4E-68 T 22-04-2016 IPR016476 SH3 domain protein APT61_RS03530 42ea18aec7a990369059bcfa0fcc2a44 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 9.6E-51 T 22-04-2016 IPR016476 SH3 domain protein APT61_RS11490 75746e6209bbe3c27fe71aa6b25e9bbb 160 Gene3D G3DSA:3.40.630.30 12 151 2.1E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS11490 75746e6209bbe3c27fe71aa6b25e9bbb 160 PANTHER PTHR13947 54 157 7.3E-18 T 22-04-2016 APT61_RS11490 75746e6209bbe3c27fe71aa6b25e9bbb 160 Pfam PF00583 Acetyltransferase (GNAT) family 59 130 4.2E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 APT61_RS11490 75746e6209bbe3c27fe71aa6b25e9bbb 160 SUPERFAMILY SSF55729 1 152 6.35E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS10205 133b3d58b99fa9ffd930f3c7141b91d8 308 Gene3D G3DSA:3.40.50.1820 62 305 3.4E-66 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS10205 133b3d58b99fa9ffd930f3c7141b91d8 308 SUPERFAMILY SSF53474 65 305 4.12E-33 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold APT61_RS10205 133b3d58b99fa9ffd930f3c7141b91d8 308 PANTHER PTHR23024 60 305 3.4E-54 T 22-04-2016 APT61_RS10205 133b3d58b99fa9ffd930f3c7141b91d8 308 Pfam PF07859 alpha/beta hydrolase fold 122 283 7.4E-12 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 APT61_RS10205 133b3d58b99fa9ffd930f3c7141b91d8 308 PANTHER PTHR23024:SF41 60 305 3.4E-54 T 22-04-2016 APT61_RS15010 66906543dbc5467f45fdcf96bdd392b7 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 40.552 T 22-04-2016 IPR023745 MSF-type transporter, YcaD APT61_RS15010 66906543dbc5467f45fdcf96bdd392b7 382 Pfam PF07690 Major Facilitator Superfamily 11 228 1.8E-14 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 APT61_RS15010 66906543dbc5467f45fdcf96bdd392b7 382 SUPERFAMILY SSF103473 6 372 9.94E-46 T 22-04-2016 IPR020846 Major facilitator superfamily domain APT61_RS15010 66906543dbc5467f45fdcf96bdd392b7 382 PANTHER PTHR23521:SF1 2 381 1.8E-225 T 22-04-2016 APT61_RS15010 66906543dbc5467f45fdcf96bdd392b7 382 PANTHER PTHR23521 2 381 1.8E-225 T 22-04-2016 APT61_RS15010 66906543dbc5467f45fdcf96bdd392b7 382 Gene3D G3DSA:1.20.1250.20 208 372 7.1E-17 T 22-04-2016 APT61_RS15010 66906543dbc5467f45fdcf96bdd392b7 382 Gene3D G3DSA:1.20.1250.20 6 189 9.7E-21 T 22-04-2016 APT61_RS12150 baab227badf37a0e7e0f9068b65771aa 111 Pfam PF06942 GlpM protein 5 111 6.8E-51 T 22-04-2016 IPR009707 Membrane protein GlpM/YdgC APT61_RS12150 baab227badf37a0e7e0f9068b65771aa 111 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 23 111 3.0E-37 T 22-04-2016 IPR009707 Membrane protein GlpM/YdgC APT61_RS12400 d1fce937bf0ad8fea73bd128a0b3b3cc 276 Pfam PF03589 Antitermination protein 183 268 2.9E-25 T 22-04-2016 IPR003222 Antitermination protein GO:0003677|GO:0006355 APT61_RS12400 d1fce937bf0ad8fea73bd128a0b3b3cc 276 Pfam PF03589 Antitermination protein 23 111 3.2E-19 T 22-04-2016 IPR003222 Antitermination protein GO:0003677|GO:0006355 APT61_RS12400 d1fce937bf0ad8fea73bd128a0b3b3cc 276 SUPERFAMILY SSF57938 172 223 1.23E-6 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APT61_RS12400 d1fce937bf0ad8fea73bd128a0b3b3cc 276 Gene3D G3DSA:2.10.230.10 174 222 3.1E-4 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 APT61_RS17145 84f7fe933a07e9063000280db0195382 175 Pfam PF07445 Primosomal replication protein priC 8 173 6.8E-44 T 22-04-2016 IPR010890 Primosomal replication PriB/PriC APT61_RS20680 0d27dd86851fdda49d8e0bd48d56fb15 281 Pfam PF06007 Phosphonate metabolism protein PhnJ 6 277 4.1E-150 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 APT61_RS20680 0d27dd86851fdda49d8e0bd48d56fb15 281 PIRSF PIRSF011468 1 281 7.9E-170 T 22-04-2016 IPR010306 Phosphonate metabolism PhnJ GO:0016829|GO:0019700|GO:0042916 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399 APT61_RS07215 b7036794ee6c993dadce59472832e9c6 348 Pfam PF03601 Conserved hypothetical protein 698 17 325 2.9E-112 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 APT61_RS07215 b7036794ee6c993dadce59472832e9c6 348 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 13 346 1.2E-156 T 22-04-2016 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 APT61_RS07215 b7036794ee6c993dadce59472832e9c6 348 PANTHER PTHR30106 7 348 8.4E-151 T 22-04-2016 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 APT61_RS07215 b7036794ee6c993dadce59472832e9c6 348 PANTHER PTHR30106:SF2 7 348 8.4E-151 T 22-04-2016 APT61_RS00360 e2d746bfafd3c3fc49111c14859a2d65 70 SUPERFAMILY SSF159871 2 69 1.07E-13 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS00360 e2d746bfafd3c3fc49111c14859a2d65 70 Gene3D G3DSA:3.30.1660.10 24 70 1.1E-11 T 22-04-2016 IPR025543 Dodecin-like APT61_RS00360 e2d746bfafd3c3fc49111c14859a2d65 70 Pfam PF07338 Protein of unknown function (DUF1471) 24 68 7.3E-10 T 22-04-2016 IPR010854 Domain of unknown function DUF1471 APT61_RS08345 9f58c9b09dfb96ad21c3b6bd48b7abd9 83 ProDom PD060536 YECJ YPO1738 1 77 2.0E-31 T 22-04-2016 IPR020262 Uncharacterised protein family YecJ APT61_RS08345 9f58c9b09dfb96ad21c3b6bd48b7abd9 83 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 3.5E-44 T 22-04-2016 IPR020262 Uncharacterised protein family YecJ APT61_RS13230 604a55d072ca1da4ff8d0cf0ed2b37b6 91 Pfam PF07383 Protein of unknown function (DUF1496) 43 89 5.5E-24 T 22-04-2016 IPR009971 Protein of unknown function DUF1496 APT61_RS01945 820c92780859884ff2319e7cdda8499d 319 PANTHER PTHR31752 89 318 4.2E-12 T 22-04-2016 APT61_RS01945 820c92780859884ff2319e7cdda8499d 319 Pfam PF03547 Membrane transport protein 5 157 5.0E-34 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 APT61_RS09685 f74b7765989c33df0817b1e2c5444983 73 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 13 71 2.5E-32 T 22-04-2016 IPR014321 Phage shock protein, PspD APT61_RS09685 f74b7765989c33df0817b1e2c5444983 73 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 11 71 7.6E-32 T 22-04-2016 IPR014321 Phage shock protein, PspD APT61_RS20665 cc1a970e72f87352e603b29df640d1ec 150 Pfam PF06754 Phosphonate metabolism protein PhnG 7 147 9.4E-53 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 APT61_RS20665 cc1a970e72f87352e603b29df640d1ec 150 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 6 148 2.4E-52 T 22-04-2016 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399 APT61_RS01455 5d99582ce970276baf98a32be3759132 428 PIRSF PIRSF006066 1 428 1.9E-175 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 APT61_RS01455 5d99582ce970276baf98a32be3759132 428 PANTHER PTHR33362:SF2 1 427 3.2E-228 T 22-04-2016 APT61_RS01455 5d99582ce970276baf98a32be3759132 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 417 2.7E-110 T 22-04-2016 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit APT61_RS01455 5d99582ce970276baf98a32be3759132 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 5.8E-131 T 22-04-2016 IPR004681 TRAP transporter permease protein GO:0016021 APT61_RS01455 5d99582ce970276baf98a32be3759132 428 PANTHER PTHR33362 1 427 3.2E-228 T 22-04-2016 APT61_RS13155 59c57df902330ae2fa02817a47253843 162 PANTHER PTHR38102:SF1 1 151 6.7E-59 T 22-04-2016 APT61_RS13155 59c57df902330ae2fa02817a47253843 162 PANTHER PTHR38102 1 151 6.7E-59 T 22-04-2016 APT61_RS13155 59c57df902330ae2fa02817a47253843 162 PIRSF PIRSF034445 1 151 7.2E-34 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 APT61_RS13155 59c57df902330ae2fa02817a47253843 162 Pfam PF07813 LTXXQ motif family protein 47 142 3.3E-23 T 22-04-2016 IPR012899 LTXXQ motif family protein GO:0042597 APT61_RS06525 b01613ce552b1cb7621a4de7e23ccd68 553 Gene3D G3DSA:1.50.10.10 200 347 2.4E-6 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APT61_RS06525 b01613ce552b1cb7621a4de7e23ccd68 553 SUPERFAMILY SSF48208 225 432 4.34E-17 T 22-04-2016 IPR008928 Six-hairpin glycosidase-like GO:0003824 APT61_RS06525 b01613ce552b1cb7621a4de7e23ccd68 553 Gene3D G3DSA:1.50.10.10 348 416 1.2E-4 T 22-04-2016 IPR012341 Six-hairpin glycosidase GO:0003824 APT61_RS05575 964654ac5e062a8ba45d40e5a0fcdb31 263 PANTHER PTHR38034 2 263 1.8E-98 T 22-04-2016 APT61_RS05575 964654ac5e062a8ba45d40e5a0fcdb31 263 Pfam PF01578 Cytochrome C assembly protein 36 260 7.7E-43 T 22-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 APT61_RS12290 1190cd8c3a32b812543ae058cc6fc881 95 Pfam PF08809 Phage related hypothetical protein (DUF1799) 14 90 7.3E-20 T 22-04-2016 IPR014915 Bacteriophage TLS, TfmB APT61_RS01590 d74f8d1005aeace2f25e8d6ce815febc 345 Gene3D G3DSA:3.30.360.10 146 336 2.3E-25 T 22-04-2016 APT61_RS01590 d74f8d1005aeace2f25e8d6ce815febc 345 SUPERFAMILY SSF51735 3 158 9.5E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS01590 d74f8d1005aeace2f25e8d6ce815febc 345 SUPERFAMILY SSF55347 131 270 9.59E-21 T 22-04-2016 APT61_RS01590 d74f8d1005aeace2f25e8d6ce815febc 345 PANTHER PTHR22604 1 336 7.9E-215 T 22-04-2016 APT61_RS01590 d74f8d1005aeace2f25e8d6ce815febc 345 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 239 3.2E-15 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 APT61_RS01590 d74f8d1005aeace2f25e8d6ce815febc 345 PANTHER PTHR22604:SF116 1 336 7.9E-215 T 22-04-2016 APT61_RS01590 d74f8d1005aeace2f25e8d6ce815febc 345 Gene3D G3DSA:3.40.50.720 3 145 1.8E-40 T 22-04-2016 IPR016040 NAD(P)-binding domain APT61_RS01590 d74f8d1005aeace2f25e8d6ce815febc 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 120 3.3E-28 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 APT61_RS21630 624c568261b21512929a9da2f70bdb24 367 Gene3D G3DSA:3.40.50.2000 156 336 2.4E-26 T 22-04-2016 APT61_RS21630 624c568261b21512929a9da2f70bdb24 367 SUPERFAMILY SSF53756 8 357 1.79E-67 T 22-04-2016 APT61_RS21630 624c568261b21512929a9da2f70bdb24 367 Pfam PF00534 Glycosyl transferases group 1 177 337 5.7E-26 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 APT61_RS21630 624c568261b21512929a9da2f70bdb24 367 Pfam PF13439 Glycosyltransferase Family 4 13 167 7.1E-20 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain APT61_RS21630 624c568261b21512929a9da2f70bdb24 367 PANTHER PTHR12526 3 363 6.0E-57 T 22-04-2016 APT61_RS21920 92b41d14443876a5a0da3b5e2bf5b65b 150 Pfam PF06711 Protein of unknown function (DUF1198) 1 143 2.7E-65 T 22-04-2016 IPR009587 Protein of unknown function DUF1198 APT61_RS21920 92b41d14443876a5a0da3b5e2bf5b65b 150 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 145 4.0E-61 T 22-04-2016 IPR009587 Protein of unknown function DUF1198 APT61_RS22005 b4ec6263023e7c9e0358f4fad0526e64 115 PANTHER PTHR34187 3 115 1.4E-35 T 22-04-2016 APT61_RS22005 b4ec6263023e7c9e0358f4fad0526e64 115 Pfam PF02656 Domain of unknown function (DUF202) 13 79 6.2E-16 T 22-04-2016 IPR003807 Domain of unknown function DUF202 APT61_RS08035 44a926b50a2381fb6c3c064bdd332fd1 62 Pfam PF10781 Dextransucrase DSRB 1 60 1.3E-35 T 22-04-2016 IPR019717 Dextransucrase DSRB APT61_RS08035 44a926b50a2381fb6c3c064bdd332fd1 62 Hamap MF_01549 Protein DsrB [dsrB]. 1 62 27.97 T 22-04-2016 IPR019717 Dextransucrase DSRB APT61_RS20875 7ba8fda53f374326341ab07b91a68441 117 Pfam PF04237 YjbR 12 101 3.5E-17 T 22-04-2016 IPR007351 Uncharacterised protein YjbR APT61_RS20875 7ba8fda53f374326341ab07b91a68441 117 SUPERFAMILY SSF142906 1 115 1.44E-33 T 22-04-2016 APT61_RS20875 7ba8fda53f374326341ab07b91a68441 117 PANTHER PTHR35145 1 117 8.4E-41 T 22-04-2016 APT61_RS17780 31a6661d821623258944c2af1eeba32d 369 PANTHER PTHR21716 11 368 5.0E-76 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APT61_RS17780 31a6661d821623258944c2af1eeba32d 369 PANTHER PTHR21716:SF13 11 368 5.0E-76 T 22-04-2016 APT61_RS17780 31a6661d821623258944c2af1eeba32d 369 Pfam PF01594 Domain of unknown function DUF20 10 339 2.6E-50 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APT61_RS12355 13d73bcc95c14d68936243f5d628f227 434 Pfam PF03237 Terminase-like family 24 416 3.7E-46 T 22-04-2016 IPR004921 Terminase, large subunit APT61_RS10260 3b1124e517773dc4bbdf3afd368dbbf4 158 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 6 149 1.9E-8 T 22-04-2016 IPR019587 Polyketide cyclase/dehydrase APT61_RS10260 3b1124e517773dc4bbdf3afd368dbbf4 158 SUPERFAMILY SSF55961 4 149 1.23E-20 T 22-04-2016 APT61_RS10260 3b1124e517773dc4bbdf3afd368dbbf4 158 Gene3D G3DSA:3.30.530.20 4 151 1.1E-13 T 22-04-2016 IPR023393 START-like domain APT61_RS15460 34af505b7bbd0941f46342e71096d0a8 127 Pfam PF10799 Biofilm formation protein (YliH/bssR) 1 125 1.3E-57 T 22-04-2016 IPR020359 Biofilm regulator BssR APT61_RS15460 34af505b7bbd0941f46342e71096d0a8 127 ProDom PD079626 YLIH RECEPTOR STY0893 CYTOPLASMIC 1 124 5.0E-39 T 22-04-2016 IPR020359 Biofilm regulator BssR APT61_RS00940 e970adce699d33ab6b3d97a6f20383a9 391 PANTHER PTHR38043 1 377 2.1E-109 T 22-04-2016 APT61_RS00940 e970adce699d33ab6b3d97a6f20383a9 391 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 35 364 2.0E-129 T 22-04-2016 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX APT61_RS13070 65fc7e260b08d2192a9dcab822f2af6f 178 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 178 2.0E-68 T 22-04-2016 APT61_RS13070 65fc7e260b08d2192a9dcab822f2af6f 178 Pfam PF14002 YniB-like protein 15 176 8.1E-75 T 22-04-2016 IPR025229 YniB-like protein APT61_RS01410 e012a0f1785a4c54c2400c18eb144539 240 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 23 237 2.3E-63 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal APT61_RS11260 f4b5a5e84b93da309b93a73733957686 94 Gene3D G3DSA:1.10.720.30 14 71 3.6E-30 T 22-04-2016 IPR003034 SAP domain APT61_RS11260 f4b5a5e84b93da309b93a73733957686 94 Pfam PF09905 Uncharacterized conserved protein (DUF2132) 7 68 8.7E-32 T 22-04-2016 IPR018668 DNA-binding protein VF530-like, bacteria GO:0003677 APT61_RS21130 b0b5bf2a7d742e1c62b255fa91a97b8c 223 Pfam PF04493 Endonuclease V 12 206 4.4E-73 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 APT61_RS21130 b0b5bf2a7d742e1c62b255fa91a97b8c 223 Hamap MF_00801 Endonuclease V [nfi]. 2 216 34.361 T 22-04-2016 IPR007581 Endonuclease V GO:0004519|GO:0006281 APT61_RS21130 b0b5bf2a7d742e1c62b255fa91a97b8c 223 PANTHER PTHR28511 3 221 1.1E-85 T 22-04-2016 APT61_RS21130 b0b5bf2a7d742e1c62b255fa91a97b8c 223 PANTHER PTHR28511:SF1 3 221 1.1E-85 T 22-04-2016 APT61_RS00405 72dfc2b47c2cc448f5805699fb27804f 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 318 1.6E-46 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS00405 72dfc2b47c2cc448f5805699fb27804f 334 PANTHER PTHR32196 21 333 1.5E-83 T 22-04-2016 APT61_RS00405 72dfc2b47c2cc448f5805699fb27804f 334 PANTHER PTHR32196:SF24 21 333 1.5E-83 T 22-04-2016 APT61_RS11610 af212fd598795002a90a5d628cd038b9 213 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 34 213 1.3E-81 T 22-04-2016 IPR015304 ZinT domain GO:0008270 APT61_RS11610 af212fd598795002a90a5d628cd038b9 213 SUPERFAMILY SSF50814 28 213 1.71E-74 T 22-04-2016 IPR011038 Calycin-like APT61_RS11610 af212fd598795002a90a5d628cd038b9 213 Gene3D G3DSA:2.40.128.20 26 213 1.8E-83 T 22-04-2016 IPR012674 Calycin APT61_RS03825 65b3631bd61e28628ec533f404f4a793 312 PANTHER PTHR30465:SF24 1 310 4.1E-129 T 22-04-2016 APT61_RS03825 65b3631bd61e28628ec533f404f4a793 312 PANTHER PTHR30465 1 310 4.1E-129 T 22-04-2016 APT61_RS03825 65b3631bd61e28628ec533f404f4a793 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 309 1.2E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS03825 65b3631bd61e28628ec533f404f4a793 312 SUPERFAMILY SSF161098 88 297 5.36E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS03825 65b3631bd61e28628ec533f404f4a793 312 Gene3D G3DSA:1.10.3720.10 86 305 1.4E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS16250 ffb759eb3be081037623e284c9ff56f8 468 Pfam PF03573 outer membrane porin, OprD family 33 432 8.4E-24 T 22-04-2016 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 APT61_RS16250 ffb759eb3be081037623e284c9ff56f8 468 Gene3D G3DSA:2.40.160.10 38 468 3.0E-50 T 22-04-2016 IPR023614 Porin domain APT61_RS15275 517f6d08729ad2f8d51f85c741feb84f 238 SUPERFAMILY SSF161098 8 216 1.7E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15275 517f6d08729ad2f8d51f85c741feb84f 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 81 2.2E-12 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 APT61_RS15275 517f6d08729ad2f8d51f85c741feb84f 238 PANTHER PTHR30133 1 237 1.7E-157 T 22-04-2016 APT61_RS15275 517f6d08729ad2f8d51f85c741feb84f 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 230 1.2E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15275 517f6d08729ad2f8d51f85c741feb84f 238 Gene3D G3DSA:1.10.3720.10 7 227 2.6E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 APT61_RS15275 517f6d08729ad2f8d51f85c741feb84f 238 PANTHER PTHR30133:SF2 1 237 1.7E-157 T 22-04-2016 APT61_RS20000 400ec06ec32eb5174f08ecc154916b48 120 Pfam PF14272 Glycine-rich SFCGS 4 117 1.1E-60 T 22-04-2016 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 APT61_RS20000 400ec06ec32eb5174f08ecc154916b48 120 TIGRFAM TIGR03577 EF_0830: conserved hypothetical protein EF_0830/AHA_3911 4 118 1.3E-68 T 22-04-2016 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 APT61_RS09115 fee11533413a56abc9762f3f317c1ced 478 PANTHER PTHR31806 20 472 4.3E-105 T 22-04-2016 APT61_RS09115 fee11533413a56abc9762f3f317c1ced 478 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 26 448 1.3E-49 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 APT61_RS09115 fee11533413a56abc9762f3f317c1ced 478 PIRSF PIRSF002744 1 471 5.8E-101 T 22-04-2016 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 APT61_RS16920 dfb0c6c51a94815643ec30613246e927 461 PANTHER PTHR11785 14 461 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS16920 dfb0c6c51a94815643ec30613246e927 461 PANTHER PTHR11785:SF365 14 461 0.0 T 22-04-2016 APT61_RS16920 dfb0c6c51a94815643ec30613246e927 461 Pfam PF00324 Amino acid permease 31 454 2.2E-117 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APT61_RS16920 dfb0c6c51a94815643ec30613246e927 461 PIRSF PIRSF006060 8 460 1.4E-75 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS16920 dfb0c6c51a94815643ec30613246e927 461 ProSitePatterns PS00218 Amino acid permeases signature. 56 86 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APT61_RS01010 46e2ecc3433b925332df7fc1398546c5 286 Gene3D G3DSA:2.40.230.10 34 285 2.3E-99 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APT61_RS01010 46e2ecc3433b925332df7fc1398546c5 286 PANTHER PTHR40457 1 286 5.9E-157 T 22-04-2016 APT61_RS01010 46e2ecc3433b925332df7fc1398546c5 286 SUPERFAMILY SSF56931 37 285 6.02E-90 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APT61_RS01010 46e2ecc3433b925332df7fc1398546c5 286 Pfam PF02253 Phospholipase A1 41 282 3.4E-88 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APT61_RS01010 46e2ecc3433b925332df7fc1398546c5 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 123 142 1.6E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APT61_RS01010 46e2ecc3433b925332df7fc1398546c5 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 255 275 1.6E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APT61_RS01010 46e2ecc3433b925332df7fc1398546c5 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 168 186 1.6E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APT61_RS01010 46e2ecc3433b925332df7fc1398546c5 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 200 218 1.6E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APT61_RS01010 46e2ecc3433b925332df7fc1398546c5 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 100 116 1.6E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APT61_RS01010 46e2ecc3433b925332df7fc1398546c5 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 153 167 1.6E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APT61_RS01010 46e2ecc3433b925332df7fc1398546c5 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 78 95 1.6E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APT61_RS01010 46e2ecc3433b925332df7fc1398546c5 286 PRINTS PR01486 Bacterial phospholipase A1 protein signature 233 250 1.6E-84 T 22-04-2016 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417 APT61_RS19985 238b7b01a6f71a17ce0a68f2072426ef 213 Pfam PF14187 Domain of unknown function (DUF4310) 4 211 5.5E-108 T 22-04-2016 IPR025456 Protein of unknown function DUF4310 APT61_RS19985 238b7b01a6f71a17ce0a68f2072426ef 213 TIGRFAM TIGR03579 EF_0833: conserved hypothetical protein EF_0833/AHA_3914 5 213 1.8E-119 T 22-04-2016 IPR025456 Protein of unknown function DUF4310 APT61_RS06635 b33c336fbf2bccf22a5bc30f15a9e332 274 SUPERFAMILY SSF55166 21 272 6.75E-101 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APT61_RS06635 b33c336fbf2bccf22a5bc30f15a9e332 274 Gene3D G3DSA:3.30.1380.10 21 272 2.3E-105 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain APT61_RS06635 b33c336fbf2bccf22a5bc30f15a9e332 274 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 274 66.922 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 APT61_RS06635 b33c336fbf2bccf22a5bc30f15a9e332 274 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 270 4.0E-94 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 APT61_RS06635 b33c336fbf2bccf22a5bc30f15a9e332 274 PIRSF PIRSF018455 1 274 2.4E-118 T 22-04-2016 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 APT61_RS00850 efe8e76152e1a972667d76de8351472b 367 PANTHER PTHR22926:SF3 7 358 1.5E-115 T 22-04-2016 APT61_RS00850 efe8e76152e1a972667d76de8351472b 367 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 27.919 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 APT61_RS00850 efe8e76152e1a972667d76de8351472b 367 Pfam PF00953 Glycosyl transferase family 4 76 232 2.4E-29 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS00850 efe8e76152e1a972667d76de8351472b 367 PANTHER PTHR22926 7 358 1.5E-115 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 APT61_RS00850 efe8e76152e1a972667d76de8351472b 367 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 351 1.0E-167 T 22-04-2016 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|UniPathway: UPA00281 APT61_RS20970 f19577da67f5872127be76d393ec6dbe 319 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 76 209 6.4E-49 T 22-04-2016 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 APT61_RS12295 c1eed24dbef64de04efe92f4329efb72 112 Pfam PF08748 Phage tail assembly chaperone 2 112 3.2E-22 T 22-04-2016 IPR014859 Phage tail assembly chaperone APT61_RS11655 79ded754963fbfcc965622b818ccb161 96 ProDom PD020173 BOR LIPOPROTEIN PLASMID ISS HOMOLOG MEMBRANE FROM PRECURSOR PALMITATE DLP12 1 95 4.0E-34 T 22-04-2016 IPR010438 Bor GO:0009279 APT61_RS11655 79ded754963fbfcc965622b818ccb161 96 Pfam PF06291 Bor protein 1 96 4.1E-40 T 22-04-2016 IPR010438 Bor GO:0009279 APT61_RS11735 2ad07f9819dd2762caa744493747b74d 248 Pfam PF06788 Uncharacterised protein family (UPF0257) 14 248 7.5E-118 T 22-04-2016 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 APT61_RS11735 2ad07f9819dd2762caa744493747b74d 248 ProDom PD120112 LIPOPROTEIN YNFC MEMBRANE UPF0257 PRECURSOR PALMITATE SIGNAL INNER 29 248 2.0E-91 T 22-04-2016 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 APT61_RS04075 5ecbedb482e7a72930806f053e3ccb51 238 Pfam PF04402 Protein of unknown function (DUF541) 30 230 3.9E-45 T 22-04-2016 IPR007497 Protein of unknown function DUF541 APT61_RS04075 5ecbedb482e7a72930806f053e3ccb51 238 PANTHER PTHR34387:SF1 5 238 1.1E-66 T 22-04-2016 APT61_RS04075 5ecbedb482e7a72930806f053e3ccb51 238 PANTHER PTHR34387 5 238 1.1E-66 T 22-04-2016 APT61_RS14360 352d4076a1f2c7cabbf3efd240a04659 139 Pfam PF12098 Protein of unknown function (DUF3574) 38 139 6.4E-41 T 22-04-2016 IPR021957 Protein of unknown function DUF3574 APT61_RS01215 6f04cc95202912cdd57cec37ceae9113 680 PANTHER PTHR30441 1 679 1.4E-171 T 22-04-2016 APT61_RS01215 6f04cc95202912cdd57cec37ceae9113 680 PANTHER PTHR30441:SF2 1 679 1.4E-171 T 22-04-2016 APT61_RS01215 6f04cc95202912cdd57cec37ceae9113 680 Pfam PF05170 AsmA family 1 575 8.0E-161 T 22-04-2016 IPR007844 AsmA APT61_RS15015 1729266a7bbebccae97664da788551fd 287 PANTHER PTHR38095 2 287 4.6E-153 T 22-04-2016 APT61_RS15015 1729266a7bbebccae97664da788551fd 287 PANTHER PTHR38095:SF2 2 287 4.6E-153 T 22-04-2016 APT61_RS15015 1729266a7bbebccae97664da788551fd 287 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 277 1.5E-107 T 22-04-2016 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 APT61_RS05965 46f1ffc5479bde11267a4231c37d596a 258 Pfam PF14581 SseB protein C-terminal domain 137 243 3.5E-31 T 22-04-2016 IPR027945 SseB protein, C-terminal APT61_RS05965 46f1ffc5479bde11267a4231c37d596a 258 Pfam PF07179 SseB protein N-terminal domain 8 119 1.7E-24 T 22-04-2016 IPR009839 SseB protein N-terminal domain APT61_RS13190 61e50d22a090d50beb27679a59e4e9d4 228 Pfam PF09335 SNARE associated Golgi protein 70 186 1.1E-22 T 22-04-2016 IPR032816 SNARE associated Golgi protein APT61_RS13190 61e50d22a090d50beb27679a59e4e9d4 228 PANTHER PTHR12677 5 225 2.8E-43 T 22-04-2016 IPR015414 Transmembrane protein TMEM64/TMEM41 GO:0016021 APT61_RS17050 fb70276c9288726b82842bdc04c97fb3 152 SUPERFAMILY SSF141322 107 149 1.11E-6 T 22-04-2016 APT61_RS17050 fb70276c9288726b82842bdc04c97fb3 152 PANTHER PTHR33507:SF3 1 152 2.5E-57 T 22-04-2016 APT61_RS17050 fb70276c9288726b82842bdc04c97fb3 152 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 148 8.9E-23 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain APT61_RS17050 fb70276c9288726b82842bdc04c97fb3 152 Gene3D G3DSA:2.40.50.140 94 148 6.4E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold APT61_RS17050 fb70276c9288726b82842bdc04c97fb3 152 PANTHER PTHR33507 1 152 2.5E-57 T 22-04-2016 APT61_RS13270 29cd09e5d1bfbce8e66d442707a3ff9a 92 Pfam PF07023 Protein of unknown function (DUF1315) 4 79 2.3E-26 T 22-04-2016 IPR009749 Protein of unknown function DUF1315 APT61_RS08960 111bdd4c495ee6688fc27b0561e2eee0 265 PANTHER PTHR31360 13 257 4.3E-156 T 22-04-2016 APT61_RS08960 111bdd4c495ee6688fc27b0561e2eee0 265 Pfam PF06884 Protein of unknown function (DUF1264) 52 216 6.1E-71 T 22-04-2016 IPR010686 Protein of unknown function DUF1264 APT61_RS08960 111bdd4c495ee6688fc27b0561e2eee0 265 PANTHER PTHR31360:SF3 13 257 4.3E-156 T 22-04-2016 APT61_RS07075 5de1225a09f20b332e37b64c21a7a021 464 PANTHER PTHR32208:SF28 84 289 1.3E-24 T 22-04-2016 APT61_RS07075 5de1225a09f20b332e37b64c21a7a021 464 Pfam PF09362 Domain of unknown function (DUF1996) 40 265 2.3E-39 T 22-04-2016 IPR018535 Domain of unknown function DUF1996 APT61_RS07075 5de1225a09f20b332e37b64c21a7a021 464 PANTHER PTHR32208 84 289 1.3E-24 T 22-04-2016 APT61_RS06870 6b807c31dea8ebce4504b84b470a6873 184 PANTHER PTHR33269 1 183 8.1E-114 T 22-04-2016 APT61_RS06870 6b807c31dea8ebce4504b84b470a6873 184 PANTHER PTHR33269:SF2 1 183 8.1E-114 T 22-04-2016 APT61_RS06870 6b807c31dea8ebce4504b84b470a6873 184 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 157 1.5E-33 T 22-04-2016 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 APT61_RS12960 e239961e71a05d80384a0fce38dea14d 342 Gene3D G3DSA:3.40.1570.10 9 139 5.6E-6 T 22-04-2016 APT61_RS12960 e239961e71a05d80384a0fce38dea14d 342 Gene3D G3DSA:3.40.1570.10 196 334 1.2E-10 T 22-04-2016 APT61_RS12960 e239961e71a05d80384a0fce38dea14d 342 Pfam PF05171 Haemin-degrading HemS.ChuX domain 27 155 1.7E-39 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 APT61_RS12960 e239961e71a05d80384a0fce38dea14d 342 Pfam PF05171 Haemin-degrading HemS.ChuX domain 204 335 3.5E-40 T 22-04-2016 IPR007845 Haemin-degrading HemS/ChuX domain GO:0006826 APT61_RS12960 e239961e71a05d80384a0fce38dea14d 342 SUPERFAMILY SSF144064 2 335 6.77E-130 T 22-04-2016 APT61_RS18145 9f70d64cbbdbaf6ebb5e9d28c2fcb92e 140 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APT61_RS18145 9f70d64cbbdbaf6ebb5e9d28c2fcb92e 140 Pfam PF00472 RF-1 domain 7 132 2.3E-27 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 APT61_RS18145 9f70d64cbbdbaf6ebb5e9d28c2fcb92e 140 PANTHER PTHR11075 8 137 4.8E-44 T 22-04-2016 APT61_RS18145 9f70d64cbbdbaf6ebb5e9d28c2fcb92e 140 SUPERFAMILY SSF75620 8 109 1.53E-14 T 22-04-2016 APT61_RS18145 9f70d64cbbdbaf6ebb5e9d28c2fcb92e 140 Gene3D G3DSA:3.30.160.200 5 107 7.0E-34 T 22-04-2016 APT61_RS03420 23290bf676119f51597f951e0968b43a 161 PIRSF PIRSF029208 1 154 1.4E-62 T 22-04-2016 IPR016912 Bacteriophage P2, GpU APT61_RS03420 23290bf676119f51597f951e0968b43a 161 Pfam PF06995 Phage P2 GpU 6 125 2.5E-45 T 22-04-2016 IPR009734 Myoviridae, GpU APT61_RS07180 280fd76fd368279ab6fa532ad81f2460 62 PANTHER PTHR36931 1 62 7.8E-20 T 22-04-2016 APT61_RS01445 4b1102f030b2b981c8e74385689bf4ec 323 PIRSF PIRSF006470 1 323 7.4E-109 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APT61_RS01445 4b1102f030b2b981c8e74385689bf4ec 323 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 284 1.8E-67 T 22-04-2016 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 APT61_RS01445 4b1102f030b2b981c8e74385689bf4ec 323 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 307 2.6E-76 T 22-04-2016 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 APT61_RS01445 4b1102f030b2b981c8e74385689bf4ec 323 PANTHER PTHR33376 9 321 6.2E-152 T 22-04-2016 APT61_RS01445 4b1102f030b2b981c8e74385689bf4ec 323 PANTHER PTHR33376:SF6 9 321 6.2E-152 T 22-04-2016 APT61_RS16380 58a68355ee7e02e5279ce219d77bb1bc 160 Pfam PF07295 Zinc-ribbon containing domain 15 157 2.6E-53 T 22-04-2016 IPR009912 Zinc-ribbon containing domain APT61_RS16190 cc1aeef9a1c6601f88c25fdf3f26f51c 559 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 558 9.2E-273 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 APT61_RS16190 cc1aeef9a1c6601f88c25fdf3f26f51c 559 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 34.798 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 APT61_RS16190 cc1aeef9a1c6601f88c25fdf3f26f51c 559 Pfam PF03814 Potassium-transporting ATPase A subunit 12 556 2.1E-236 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 APT61_RS16190 cc1aeef9a1c6601f88c25fdf3f26f51c 559 PANTHER PTHR30607 2 559 6.7E-301 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 APT61_RS16190 cc1aeef9a1c6601f88c25fdf3f26f51c 559 PIRSF PIRSF001294 1 559 4.3E-231 T 22-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 APT61_RS14835 c69f71510b4e8651bcf5adc8e2506dc1 320 Gene3D G3DSA:3.40.190.10 123 232 5.9E-33 T 22-04-2016 APT61_RS14835 c69f71510b4e8651bcf5adc8e2506dc1 320 Pfam PF09084 NMT1/THI5 like 69 229 2.4E-13 T 22-04-2016 IPR015168 SsuA/THI5-like APT61_RS14835 c69f71510b4e8651bcf5adc8e2506dc1 320 PANTHER PTHR30024 1 310 1.6E-149 T 22-04-2016 APT61_RS14835 c69f71510b4e8651bcf5adc8e2506dc1 320 Gene3D G3DSA:3.40.190.10 30 122 6.2E-4 T 22-04-2016 APT61_RS14835 c69f71510b4e8651bcf5adc8e2506dc1 320 SUPERFAMILY SSF53850 27 259 5.88E-53 T 22-04-2016 APT61_RS14835 c69f71510b4e8651bcf5adc8e2506dc1 320 SMART SM00062 29 259 2.2E-32 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF APT61_RS14835 c69f71510b4e8651bcf5adc8e2506dc1 320 PANTHER PTHR30024:SF11 1 310 1.6E-149 T 22-04-2016 APT61_RS14835 c69f71510b4e8651bcf5adc8e2506dc1 320 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 30 310 2.4E-83 T 22-04-2016 IPR010067 Aliphatic sulfonates-binding protein GO:0006790|GO:0006810|GO:0016020 APT61_RS10105 acc1ede7bafc31a7f2d31863162f9203 464 Pfam PF11329 Protein of unknown function (DUF3131) 53 423 1.1E-123 T 22-04-2016 IPR021478 Protein of unknown function DUF3131 APT61_RS10195 211e10f6d35ef0f67b4f30e0044ed603 220 Pfam PF06551 Protein of unknown function (DUF1120) 25 127 3.1E-25 T 22-04-2016 IPR010546 Protein of unknown function DUF1120 APT61_RS06455 8576b0e0fc80eea78adbf99d9bdafc7f 111 Pfam PF10697 Protein of unknown function (DUF2502) 23 105 8.0E-19 T 22-04-2016 IPR019638 Protein of unknown function DUF2502 APT61_RS03940 780df30bf6a051311bd6496f2759c458 108 PANTHER PTHR38778 2 108 1.1E-50 T 22-04-2016 APT61_RS03940 780df30bf6a051311bd6496f2759c458 108 PANTHER PTHR38778:SF1 2 108 1.1E-50 T 22-04-2016 APT61_RS03940 780df30bf6a051311bd6496f2759c458 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 2.6E-41 T 22-04-2016 IPR007416 Protein of unknown function DUF469 APT61_RS00320 a027fc7774aadb33de8e725e96e2128f 170 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 90 112 9.5E-6 T 22-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APT61_RS00320 a027fc7774aadb33de8e725e96e2128f 170 PRINTS PR01489 Gram-negative bacterial RTX toxin-activating protein C signature 25 41 9.5E-6 T 22-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APT61_RS00320 a027fc7774aadb33de8e725e96e2128f 170 Pfam PF02794 RTX toxin acyltransferase family 23 149 1.9E-42 T 22-04-2016 IPR003996 RTX toxin-activating protein C, bacteria GO:0005737|GO:0009404|GO:0016746 KEGG: 00061+2.3.1.-|KEGG: 00253+2.3.1.-|KEGG: 00261+2.3.1.-|KEGG: 00310+2.3.1.-|KEGG: 00330+2.3.1.-|KEGG: 00332+2.3.1.-|KEGG: 00340+2.3.1.-|KEGG: 00350+2.3.1.-|KEGG: 00564+2.3.1.-|KEGG: 00565+2.3.1.-|KEGG: 00604+2.3.1.-|KEGG: 00623+2.3.1.-|KEGG: 00626+2.3.1.-|KEGG: 00627+2.3.1.-|KEGG: 00642+2.3.1.-|KEGG: 00650+2.3.1.-|KEGG: 00680+2.3.1.-|KEGG: 00903+2.3.1.-|KEGG: 00904+2.3.1.-|KEGG: 00906+2.3.1.-|KEGG: 00940+2.3.1.-|KEGG: 00942+2.3.1.-|KEGG: 00950+2.3.1.-|KEGG: 00960+2.3.1.-|KEGG: 00965+2.3.1.- APT61_RS21310 9df578513d686c8b4bb515bcd75b1701 233 SUPERFAMILY SSF103515 87 233 2.75E-10 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS21310 9df578513d686c8b4bb515bcd75b1701 233 Pfam PF03797 Autotransporter beta-domain 92 212 1.8E-7 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS21310 9df578513d686c8b4bb515bcd75b1701 233 Gene3D G3DSA:2.40.128.130 90 233 2.6E-8 T 22-04-2016 IPR005546 Autotransporter beta-domain APT61_RS21310 9df578513d686c8b4bb515bcd75b1701 233 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 140 233 2.8E-5 T 22-04-2016 IPR006315 Outer membrane autotransporter barrel GO:0019867 APT61_RS01575 67db94191f5a2ce96668fde6b1491904 125 ProDom PD059127 YHHA MEMBRANE OUTER PRECURSOR SIGNAL STY4259 ORFQ ECS4294 1 125 1.0E-12 T 22-04-2016 IPR020158 Protein of unknown function DUF2756 APT61_RS01575 67db94191f5a2ce96668fde6b1491904 125 Pfam PF10956 Protein of unknown function (DUF2756) 1 99 3.5E-44 T 22-04-2016 IPR020158 Protein of unknown function DUF2756 APT61_RS03180 b0ea3fbc7e873ae38b324a4d895fc7e3 217 Pfam PF17037 Cellulose biosynthesis protein BcsO 1 217 1.1E-19 T 22-04-2016 IPR031484 Cellulose biosynthesis protein BcsO APT61_RS13555 9dbc6069cff80396898168d2831c0dbe 702 Pfam PF13884 Chaperone of endosialidase 594 643 8.1E-8 T 22-04-2016 IPR030392 Intramolecular chaperone auto-processing domain APT61_RS02670 ee210df51baa3b2c85894b7d481e93b8 325 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 1.4E-97 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 APT61_RS02670 ee210df51baa3b2c85894b7d481e93b8 325 Pfam PF01699 Sodium/calcium exchanger protein 4 143 3.3E-27 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 APT61_RS02670 ee210df51baa3b2c85894b7d481e93b8 325 Pfam PF01699 Sodium/calcium exchanger protein 176 317 9.4E-26 T 22-04-2016 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: REACT_15518 APT61_RS02670 ee210df51baa3b2c85894b7d481e93b8 325 PANTHER PTHR10846 19 316 9.1E-75 T 22-04-2016 IPR004481 Sodium/potassium/calcium exchanger Reactome: REACT_15518 APT61_RS07345 2ec2436bd979bc9cef8708ba5d181d86 195 Pfam PF06930 Protein of unknown function (DUF1282) 7 177 2.3E-44 T 22-04-2016 IPR009698 Protein of unknown function DUF1282 APT61_RS03945 a3a683bfb2e38bc46d8999e53009284f 239 Pfam PF11101 Protein of unknown function (DUF2884) 24 235 4.7E-39 T 22-04-2016 IPR021307 Protein of unknown function DUF2884 APT61_RS09850 37c96bc2bb1913aad61188b8d50884e7 322 SUPERFAMILY SSF56436 46 290 3.3E-44 T 22-04-2016 IPR016187 C-type lectin fold APT61_RS09850 37c96bc2bb1913aad61188b8d50884e7 322 Pfam PF03781 Sulfatase-modifying factor enzyme 1 47 266 9.8E-34 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme APT61_RS09850 37c96bc2bb1913aad61188b8d50884e7 322 Gene3D G3DSA:3.90.1580.10 42 314 3.1E-45 T 22-04-2016 IPR005532 Sulfatase-modifying factor enzyme APT61_RS09850 37c96bc2bb1913aad61188b8d50884e7 322 PANTHER PTHR23150 47 175 1.4E-24 T 22-04-2016 APT61_RS09850 37c96bc2bb1913aad61188b8d50884e7 322 PANTHER PTHR23150 192 299 1.4E-24 T 22-04-2016 APT61_RS12850 935b3e47b599b0aea5e2a2b36d366aa7 69 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 67 2.0E-26 T 22-04-2016 APT61_RS12850 935b3e47b599b0aea5e2a2b36d366aa7 69 Pfam PF10965 Protein of unknown function (DUF2767) 1 67 3.8E-32 T 22-04-2016 IPR024493 Protein of unknown function DUF2767 APT61_RS12415 81d9f533e6404afb1a0cafa5dd1b524a 96 Gene3D G3DSA:3.30.50.20 19 93 4.8E-37 T 22-04-2016 APT61_RS12415 81d9f533e6404afb1a0cafa5dd1b524a 96 Pfam PF07102 Protein of unknown function (DUF1364) 3 93 6.5E-41 T 22-04-2016 IPR010774 Protein of unknown function DUF1364 APT61_RS13770 77d12e56941bd06eb5bec6af1b8a20a0 81 SUPERFAMILY SSF46955 4 79 1.1E-19 T 22-04-2016 IPR009061 Putative DNA-binding domain APT61_RS13770 77d12e56941bd06eb5bec6af1b8a20a0 81 Gene3D G3DSA:1.10.1660.20 3 80 1.2E-27 T 22-04-2016 IPR012884 Excisionase-like GO:0003677|GO:0006310 APT61_RS13770 77d12e56941bd06eb5bec6af1b8a20a0 81 Pfam PF07825 Excisionase-like protein 5 75 1.6E-12 T 22-04-2016 IPR012884 Excisionase-like GO:0003677|GO:0006310 APT61_RS01355 e03b377c2ade82c89b28c1273956041c 194 Pfam PF11659 Protein of unknown function (DUF3261) 14 166 1.0E-39 T 22-04-2016 IPR021675 Protein of unknown function DUF3261 APT61_RS10110 7b581c70939143c49ae5deab4e6c5b00 515 Pfam PF11329 Protein of unknown function (DUF3131) 50 426 6.8E-148 T 22-04-2016 IPR021478 Protein of unknown function DUF3131 APT61_RS17555 74537d568c927be83dfa3cea292570a7 174 PANTHER PTHR21087 1 168 3.4E-84 T 22-04-2016 APT61_RS17555 74537d568c927be83dfa3cea292570a7 174 Gene3D G3DSA:3.40.50.300 2 168 2.5E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17555 74537d568c927be83dfa3cea292570a7 174 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 24.423 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS17555 74537d568c927be83dfa3cea292570a7 174 Pfam PF01202 Shikimate kinase 11 168 4.3E-46 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS17555 74537d568c927be83dfa3cea292570a7 174 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 APT61_RS17555 74537d568c927be83dfa3cea292570a7 174 SUPERFAMILY SSF52540 3 169 1.13E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS17555 74537d568c927be83dfa3cea292570a7 174 PANTHER PTHR21087:SF9 1 168 3.4E-84 T 22-04-2016 APT61_RS17555 74537d568c927be83dfa3cea292570a7 174 PRINTS PR01100 Shikimate kinase family signature 5 20 2.0E-24 T 22-04-2016 APT61_RS17555 74537d568c927be83dfa3cea292570a7 174 PRINTS PR01100 Shikimate kinase family signature 95 112 2.0E-24 T 22-04-2016 APT61_RS17555 74537d568c927be83dfa3cea292570a7 174 PRINTS PR01100 Shikimate kinase family signature 74 83 2.0E-24 T 22-04-2016 APT61_RS17555 74537d568c927be83dfa3cea292570a7 174 PRINTS PR01100 Shikimate kinase family signature 29 42 2.0E-24 T 22-04-2016 APT61_RS17555 74537d568c927be83dfa3cea292570a7 174 PRINTS PR01100 Shikimate kinase family signature 57 65 2.0E-24 T 22-04-2016 APT61_RS21960 c3e8a711deb4d1e19565fea0d7407d38 159 Pfam PF05638 Type VI secretion system effector, Hcp 11 142 3.2E-29 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS21960 c3e8a711deb4d1e19565fea0d7407d38 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 156 1.3E-37 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS21960 c3e8a711deb4d1e19565fea0d7407d38 159 Gene3D G3DSA:2.30.110.20 1 155 7.5E-26 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS21960 c3e8a711deb4d1e19565fea0d7407d38 159 PANTHER PTHR34319 1 158 5.3E-53 T 22-04-2016 APT61_RS21960 c3e8a711deb4d1e19565fea0d7407d38 159 SUPERFAMILY SSF141452 3 156 9.94E-38 T 22-04-2016 IPR008514 Type VI secretion system effector, Hcp APT61_RS21960 c3e8a711deb4d1e19565fea0d7407d38 159 PANTHER PTHR34319:SF2 1 158 5.3E-53 T 22-04-2016 APT61_RS08170 3a5cd78e7b0bb74174e18e6b31cc947a 183 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 165 5.8E-84 T 22-04-2016 IPR022523 Flagellar regulator, FliZ APT61_RS08170 3a5cd78e7b0bb74174e18e6b31cc947a 183 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 90 164 5.1E-13 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 APT61_RS21825 0369e72d51e9f09abd6d67c946966cd8 332 SUPERFAMILY SSF53335 128 306 6.82E-13 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS21825 0369e72d51e9f09abd6d67c946966cd8 332 Gene3D G3DSA:3.40.50.150 258 331 0.001 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS21825 0369e72d51e9f09abd6d67c946966cd8 332 Gene3D G3DSA:3.40.50.150 172 257 4.7E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase APT61_RS19285 41164c0030c2ff9f543f6daa740e2ef5 166 Pfam PF10696 Protein of unknown function (DUF2501) 85 164 5.1E-25 T 22-04-2016 IPR019637 Protein of unknown function DUF2501 APT61_RS05030 3ca86133c03bcab42d16d70fa68327cf 136 Pfam PF06519 TolA C-terminal 43 121 6.5E-10 T 22-04-2016 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 APT61_RS05030 3ca86133c03bcab42d16d70fa68327cf 136 SUPERFAMILY SSF74653 42 129 6.28E-12 T 22-04-2016 APT61_RS05030 3ca86133c03bcab42d16d70fa68327cf 136 Gene3D G3DSA:3.30.1150.10 32 127 3.0E-23 T 22-04-2016 APT61_RS05265 e371107506afc04f75ab43460e80ad39 138 Pfam PF15599 Immunity protein 63 45 124 1.6E-24 T 22-04-2016 IPR028952 Immunity protein 63 APT61_RS19260 c1058b4bebbcc01dd3e272ca543f5145 157 PANTHER PTHR34390 1 157 8.7E-52 T 22-04-2016 APT61_RS19260 c1058b4bebbcc01dd3e272ca543f5145 157 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 157 42.364 T 22-04-2016 IPR020914 Uncharacterised protein family UPF0442 APT61_RS19260 c1058b4bebbcc01dd3e272ca543f5145 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 9.1E-34 T 22-04-2016 IPR024528 Threonine/Serine exporter, ThrE APT61_RS19050 5e590da1ae9dc5b1df2f676949aae601 95 Pfam PF10697 Protein of unknown function (DUF2502) 25 85 9.1E-15 T 22-04-2016 IPR019638 Protein of unknown function DUF2502 APT61_RS17120 c72e54bf8c819569845af23e9e106f7a 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 104.334 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APT61_RS17120 c72e54bf8c819569845af23e9e106f7a 201 SMART SM00493 81 166 2.4E-19 T 22-04-2016 IPR006171 Toprim domain APT61_RS17120 c72e54bf8c819569845af23e9e106f7a 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 1.3E-83 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 APT61_RS17120 c72e54bf8c819569845af23e9e106f7a 201 PANTHER PTHR30446 1 201 2.7E-120 T 22-04-2016 APT61_RS17120 c72e54bf8c819569845af23e9e106f7a 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 APT61_RS17120 c72e54bf8c819569845af23e9e106f7a 201 PANTHER PTHR30446:SF0 1 201 2.7E-120 T 22-04-2016 APT61_RS17120 c72e54bf8c819569845af23e9e106f7a 201 Pfam PF13662 Toprim domain 82 172 3.7E-24 T 22-04-2016 IPR006171 Toprim domain APT61_RS17120 c72e54bf8c819569845af23e9e106f7a 201 SUPERFAMILY SSF111304 2 199 3.79E-72 T 22-04-2016 IPR023627 Recombination protein RecR APT61_RS17120 c72e54bf8c819569845af23e9e106f7a 201 Pfam PF02132 RecR protein 41 77 2.9E-15 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger APT61_RS18575 fe9e88c28e9ccf4d08b95fd8fb2c2a16 170 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 4 170 3.0E-57 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 APT61_RS18575 fe9e88c28e9ccf4d08b95fd8fb2c2a16 170 Pfam PF06558 Secretion monitor precursor protein (SecM) 27 167 1.6E-52 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 APT61_RS18575 fe9e88c28e9ccf4d08b95fd8fb2c2a16 170 Hamap MF_01332 Secretion monitor [secM]. 4 170 39.46 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 APT61_RS18575 fe9e88c28e9ccf4d08b95fd8fb2c2a16 170 PIRSF PIRSF004572 4 170 4.6E-77 T 22-04-2016 IPR009502 Secretion monitor GO:0045182 APT61_RS19505 b2b4c44271627ae2b5323922860f7113 181 SUPERFAMILY SSF56925 50 159 1.88E-7 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 APT61_RS19505 b2b4c44271627ae2b5323922860f7113 181 Pfam PF07437 YfaZ precursor 1 181 2.5E-45 T 22-04-2016 IPR009998 YfaZ APT61_RS09820 c0cef9f62f911ed8327de1a5cb4fff83 571 PANTHER PTHR30128 271 571 2.1E-60 T 22-04-2016 APT61_RS09820 c0cef9f62f911ed8327de1a5cb4fff83 571 PANTHER PTHR30128:SF11 271 571 2.1E-60 T 22-04-2016 APT61_RS09820 c0cef9f62f911ed8327de1a5cb4fff83 571 PRINTS PR01021 OMPA domain signature 442 464 3.3E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS09820 c0cef9f62f911ed8327de1a5cb4fff83 571 PRINTS PR01021 OMPA domain signature 487 503 3.3E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS09820 c0cef9f62f911ed8327de1a5cb4fff83 571 PRINTS PR01021 OMPA domain signature 472 487 3.3E-7 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 APT61_RS09820 c0cef9f62f911ed8327de1a5cb4fff83 571 Pfam PF00691 OmpA family 441 537 1.5E-16 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS09820 c0cef9f62f911ed8327de1a5cb4fff83 571 SUPERFAMILY SSF103088 417 542 7.06E-33 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS09820 c0cef9f62f911ed8327de1a5cb4fff83 571 Gene3D G3DSA:3.30.1330.60 429 545 6.1E-35 T 22-04-2016 IPR006665 OmpA-like domain APT61_RS10995 1cb2b69131c936138aa532cb6b10b3f0 231 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 9 154 2.0E-35 T 22-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 APT61_RS10995 1cb2b69131c936138aa532cb6b10b3f0 231 SUPERFAMILY SSF89155 2 156 7.85E-27 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APT61_RS10995 1cb2b69131c936138aa532cb6b10b3f0 231 PANTHER PTHR30598 1 209 2.3E-136 T 22-04-2016 APT61_RS10995 1cb2b69131c936138aa532cb6b10b3f0 231 PANTHER PTHR30598:SF5 1 209 2.3E-136 T 22-04-2016 APT61_RS10995 1cb2b69131c936138aa532cb6b10b3f0 231 Pfam PF02613 Nitrate reductase delta subunit 41 124 1.1E-9 T 22-04-2016 IPR020945 DMSO/Nitrate reductase chaperone APT61_RS08555 443f1744035fd3514ce49ef362f27a90 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 2.0E-51 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APT61_RS08555 443f1744035fd3514ce49ef362f27a90 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 2.0E-51 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APT61_RS08555 443f1744035fd3514ce49ef362f27a90 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 2.0E-51 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APT61_RS08555 443f1744035fd3514ce49ef362f27a90 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 2.0E-51 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APT61_RS08555 443f1744035fd3514ce49ef362f27a90 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 2.0E-51 T 22-04-2016 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 APT61_RS08555 443f1744035fd3514ce49ef362f27a90 147 SUPERFAMILY SSF55811 3 139 2.71E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS08555 443f1744035fd3514ce49ef362f27a90 147 PANTHER PTHR22769:SF28 1 146 5.6E-61 T 22-04-2016 APT61_RS08555 443f1744035fd3514ce49ef362f27a90 147 PANTHER PTHR22769 1 146 5.6E-61 T 22-04-2016 APT61_RS08555 443f1744035fd3514ce49ef362f27a90 147 Gene3D G3DSA:3.90.79.10 1 143 1.6E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 APT61_RS08555 443f1744035fd3514ce49ef362f27a90 147 Pfam PF00293 NUDIX domain 5 139 1.3E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 APT61_RS12045 3a2eabf2e0d76048b0884efbe38c3717 130 Hamap MF_00546 Acid shock protein [asr]. 1 130 15.77 T 22-04-2016 IPR023497 Acid shock protein APT61_RS20415 aaeee1888164a666e222fbc8d2925a2c 500 Pfam PF13520 Amino acid permease 11 466 3.0E-28 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS20415 aaeee1888164a666e222fbc8d2925a2c 500 PANTHER PTHR11785:SF322 6 493 3.1E-121 T 22-04-2016 APT61_RS20415 aaeee1888164a666e222fbc8d2925a2c 500 PANTHER PTHR11785 6 493 3.1E-121 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS20415 aaeee1888164a666e222fbc8d2925a2c 500 PIRSF PIRSF006060 1 499 6.1E-60 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS00870 0c1ce3f987d0b7a0abcbf108f7380605 225 SUPERFAMILY SSF55729 42 216 6.13E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS00870 0c1ce3f987d0b7a0abcbf108f7380605 225 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 45 225 2.9E-84 T 22-04-2016 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315|UniPathway: UPA00566 APT61_RS00870 0c1ce3f987d0b7a0abcbf108f7380605 225 Gene3D G3DSA:3.40.630.30 89 213 3.3E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase APT61_RS00870 0c1ce3f987d0b7a0abcbf108f7380605 225 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 45 225 43.245 T 22-04-2016 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315|UniPathway: UPA00566 APT61_RS00505 5620dee63fe00f45f5989a46cbdf267c 198 Pfam PF07305 Protein of unknown function (DUF1454) 24 192 7.7E-81 T 22-04-2016 IPR009918 Protein of unknown function DUF1454 APT61_RS11080 fc3055c782d3fb3ca380a4c05c6e9ce5 217 Pfam PF11153 Protein of unknown function (DUF2931) 5 215 5.3E-42 T 22-04-2016 IPR021326 Protein of unknown function DUF2931 APT61_RS03185 9360f298b54d5ce9ffeda75449f13dfd 268 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 242 4.8E-38 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ APT61_RS03185 9360f298b54d5ce9ffeda75449f13dfd 268 SUPERFAMILY SSF52540 2 249 1.1E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03185 9360f298b54d5ce9ffeda75449f13dfd 268 Gene3D G3DSA:3.40.50.300 2 249 4.2E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS03185 9360f298b54d5ce9ffeda75449f13dfd 268 PANTHER PTHR13696 1 258 2.3E-25 T 22-04-2016 APT61_RS03185 9360f298b54d5ce9ffeda75449f13dfd 268 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 244 1.7E-55 T 22-04-2016 IPR017746 Cellulose synthase operon protein BcsQ APT61_RS03245 e0ea911f6bca8f483aeaaf6546081a42 169 Pfam PF06892 Phage regulatory protein CII (CP76) 4 160 1.5E-68 T 22-04-2016 IPR009679 Bacteriophage 186, CII APT61_RS05375 607a18b680ab62cc08c6cc3d4584fe78 228 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS05375 607a18b680ab62cc08c6cc3d4584fe78 228 PANTHER PTHR11079:SF73 9 227 1.1E-54 T 22-04-2016 APT61_RS05375 607a18b680ab62cc08c6cc3d4584fe78 228 PANTHER PTHR11079 9 227 1.1E-54 T 22-04-2016 APT61_RS05375 607a18b680ab62cc08c6cc3d4584fe78 228 SUPERFAMILY SSF55120 11 225 4.64E-58 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS05375 607a18b680ab62cc08c6cc3d4584fe78 228 Pfam PF00849 RNA pseudouridylate synthase 25 177 4.4E-27 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 APT61_RS21395 1b24b1adcbc8c2c8f96d5fa7a07eb773 331 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 331 37.483 T 22-04-2016 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 UniPathway: UPA00566 APT61_RS21395 1b24b1adcbc8c2c8f96d5fa7a07eb773 331 Pfam PF01757 Acyltransferase family 6 321 3.9E-36 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 APT61_RS13630 43da2bbf29ebaea7a33fb3c607225a1c 107 PIRSF PIRSF030771 1 107 3.2E-35 T 22-04-2016 IPR011231 Bacteriophage VT1-Sakai, H0018 APT61_RS13630 43da2bbf29ebaea7a33fb3c607225a1c 107 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 1 105 1.3E-27 T 22-04-2016 IPR011231 Bacteriophage VT1-Sakai, H0018 APT61_RS19810 46f9b38279c702c06932a465dd2466e9 245 ProDom PD037484 CAPSID DETERMINATION SIZE HEAD GLYCOPROTEIN SID MORPHOGENESIS CP-933I ENCODED LATE 1 245 9.0E-67 T 22-04-2016 APT61_RS12450 ceefda9faa73577ccbea476bf3a3b23c 87 Pfam PF06163 Bacterial protein of unknown function (DUF977) 1 73 1.9E-26 T 22-04-2016 IPR010382 Protein of unknown function DUF977 APT61_RS03325 50bbf7a90c7453b6959f0551ddeedcdf 67 Pfam PF05489 Phage Tail Protein X 1 60 2.8E-32 T 22-04-2016 IPR008861 Phage Tail Protein X-like APT61_RS21525 8fbd97492cebf8f7187befd603f94025 120 Pfam PF10928 Protein of unknown function (DUF2810) 66 117 1.9E-32 T 22-04-2016 IPR021230 Protein of unknown function DUF2810 APT61_RS03410 e0800e532a323bf597e72a9757fbbead 39 Pfam PF06528 Phage P2 GpE 1 36 2.0E-19 T 22-04-2016 IPR009493 Burkholderia phage phiE202, Gp27 APT61_RS12385 8561667ce11a48dedd6173238d80856f 90 Pfam PF05449 Putative 3TM holin, Phage_holin_3 10 83 5.1E-14 T 22-04-2016 IPR008473 Putative 3TM holin, Phage holin 3 APT61_RS17180 f758fb55027e5db98a50e4b77599bf76 154 Pfam PF10777 Inner membrane protein YlaC 1 151 6.4E-68 T 22-04-2016 IPR019713 Inner membrane protein YlaC APT61_RS08495 cf62496473676834d1586b918f41420e 130 Pfam PF06366 Flagellar protein FlhE 28 130 4.7E-37 T 22-04-2016 IPR009420 Flagellar protein FlhE APT61_RS07645 fe2f7a08b571919c335604cfb3cc9d50 618 Pfam PF05170 AsmA family 218 511 8.7E-22 T 22-04-2016 IPR007844 AsmA APT61_RS07645 fe2f7a08b571919c335604cfb3cc9d50 618 Pfam PF05170 AsmA family 2 196 7.5E-20 T 22-04-2016 IPR007844 AsmA APT61_RS07645 fe2f7a08b571919c335604cfb3cc9d50 618 PANTHER PTHR30441 1 617 5.1E-197 T 22-04-2016 APT61_RS07645 fe2f7a08b571919c335604cfb3cc9d50 618 PANTHER PTHR30441:SF4 1 617 5.1E-197 T 22-04-2016 APT61_RS14010 dd614259f8ddc6fe5a88f050e64ae011 173 PANTHER PTHR38099 2 173 1.8E-84 T 22-04-2016 APT61_RS14010 dd614259f8ddc6fe5a88f050e64ae011 173 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 5.2E-19 T 22-04-2016 IPR003772 Protein of unknown function DUF177 APT61_RS05270 79d97c48aefaf3c29f876ccc275fc805 210 SUPERFAMILY SSF160631 31 135 1.12E-6 T 22-04-2016 APT61_RS09275 7dd1bc2fa4c2c8ea133090a193e46027 467 Pfam PF11924 Invasin beta-domain of outer membrane 61 340 9.4E-100 T 22-04-2016 IPR024519 Invasin beta-domain of outer membrane APT61_RS09275 7dd1bc2fa4c2c8ea133090a193e46027 467 PANTHER PTHR39576 1 461 3.2E-295 T 22-04-2016 APT61_RS09275 7dd1bc2fa4c2c8ea133090a193e46027 467 PANTHER PTHR39576:SF1 1 461 3.2E-295 T 22-04-2016 APT61_RS08675 c414b69128dad382afd7b53e0c8c263a 290 PANTHER PTHR34820 1 290 2.9E-65 T 22-04-2016 APT61_RS08675 c414b69128dad382afd7b53e0c8c263a 290 Pfam PF05425 Copper resistance protein D 186 283 4.2E-23 T 22-04-2016 IPR008457 Copper resistance protein D GO:0016021 APT61_RS06565 b161eaccd02a2e16f5930311f4c58163 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 2.2E-58 T 22-04-2016 IPR018636 Protein of unknown function DUF2058 APT61_RS20105 363ae764ed6979db231261868ab4bcd4 68 Gene3D G3DSA:3.30.1910.10 1 65 1.9E-37 T 22-04-2016 APT61_RS20105 363ae764ed6979db231261868ab4bcd4 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 4.0E-29 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 APT61_RS20105 363ae764ed6979db231261868ab4bcd4 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 1.8E-30 T 22-04-2016 IPR009491 Protein of unknown function DUF1107 APT61_RS03030 d89b4d6b637abc2d80748d5587782ccd 132 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 19 127 1.4E-21 T 22-04-2016 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III APT61_RS12770 c9b43658072789fa4e8fce684c97793d 437 ProSitePatterns PS00571 Amidases signature. 140 171 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS12770 c9b43658072789fa4e8fce684c97793d 437 SUPERFAMILY SSF75304 19 434 3.4E-97 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS12770 c9b43658072789fa4e8fce684c97793d 437 PANTHER PTHR11895 21 434 1.9E-98 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS12770 c9b43658072789fa4e8fce684c97793d 437 Pfam PF01425 Amidase 22 424 1.5E-83 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS12770 c9b43658072789fa4e8fce684c97793d 437 Gene3D G3DSA:3.90.1300.10 10 434 5.1E-107 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 APT61_RS09230 2619b93de3651953bddaea994041028b 80 Pfam PF08980 Domain of unknown function (DUF1883) 12 78 4.5E-5 T 22-04-2016 IPR015073 Atu1913-like APT61_RS09230 2619b93de3651953bddaea994041028b 80 Gene3D G3DSA:4.10.1210.10 10 79 4.2E-6 T 22-04-2016 IPR015073 Atu1913-like APT61_RS09230 2619b93de3651953bddaea994041028b 80 SUPERFAMILY SSF141099 1 79 1.57E-21 T 22-04-2016 IPR015073 Atu1913-like APT61_RS12950 1babdb45365f952ff66b630a76699d34 78 Pfam PF10636 Hemin uptake protein hemP 42 78 2.8E-17 T 22-04-2016 IPR019600 Hemin uptake protein HemP APT61_RS12950 1babdb45365f952ff66b630a76699d34 78 Gene3D G3DSA:2.10.70.10 40 78 2.5E-19 T 22-04-2016 APT61_RS14420 c2415bffc49e83a56ad19fb9ae989431 307 Pfam PF00892 EamA-like transporter family 16 141 1.0E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS14420 c2415bffc49e83a56ad19fb9ae989431 307 Pfam PF00892 EamA-like transporter family 154 283 3.8E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 APT61_RS14420 c2415bffc49e83a56ad19fb9ae989431 307 PANTHER PTHR12715 15 297 3.1E-39 T 22-04-2016 APT61_RS14420 c2415bffc49e83a56ad19fb9ae989431 307 SUPERFAMILY SSF103481 194 284 2.88E-9 T 22-04-2016 APT61_RS14420 c2415bffc49e83a56ad19fb9ae989431 307 SUPERFAMILY SSF103481 46 145 1.57E-11 T 22-04-2016 APT61_RS21125 c237dcf03cede93da28b6ac95be4881d 196 Gene3D G3DSA:1.20.1590.10 1 194 2.9E-91 T 22-04-2016 IPR023381 YP001051499.1-like domain APT61_RS21125 c237dcf03cede93da28b6ac95be4881d 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 2.1E-81 T 22-04-2016 IPR007338 Protein of unknown function DUF416 APT61_RS19635 6cbd4b19a6d612e632435f853fe1e6f6 65 Pfam PF10965 Protein of unknown function (DUF2767) 13 50 3.8E-5 T 22-04-2016 IPR024493 Protein of unknown function DUF2767 APT61_RS20740 ed312d5c1d280d01fe2038913a123814 228 Gene3D G3DSA:2.60.120.10 128 182 8.3E-4 T 22-04-2016 IPR014710 RmlC-like jelly roll fold APT61_RS20740 ed312d5c1d280d01fe2038913a123814 228 SUPERFAMILY SSF51182 82 177 1.04E-5 T 22-04-2016 IPR011051 RmlC-like cupin domain APT61_RS20740 ed312d5c1d280d01fe2038913a123814 228 Pfam PF07385 Protein of unknown function (DUF1498) 1 223 1.8E-96 T 22-04-2016 IPR010864 Protein of unknown function DUF1498 KEGG: 00040+5.3.1.15 APT61_RS14185 150661853e75a9baa1fce9f9990b619f 124 Pfam PF13984 MsyB protein 3 124 1.3E-64 T 22-04-2016 IPR025729 MsyB protein APT61_RS19830 ea1c7aedf5de2bfcbe627b795a8d73de 365 Pfam PF14130 Domain of unknown function (DUF4297) 16 225 4.1E-50 T 22-04-2016 IPR025382 Domain of unknown function DUF4297 APT61_RS03350 faeff446dd85fd3a3f743ea0e723b0b6 143 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 130 1.2E-45 T 22-04-2016 IPR009678 Bacteriophage tail completion protein R APT61_RS11580 f7ff98c8320be4ce34a87ab8a3606152 71 ProDom PD027692 ANTIBIOTIC RESISTANCE MULTIPLE MARB 17 71 6.0E-10 T 22-04-2016 IPR025732 MarB protein APT61_RS11580 f7ff98c8320be4ce34a87ab8a3606152 71 Pfam PF13999 MarB protein 6 69 1.2E-30 T 22-04-2016 IPR025732 MarB protein APT61_RS05045 c8c25a2900ecb9377fc354ad1f55ba95 352 Pfam PF13391 HNH endonuclease 247 295 3.0E-8 T 22-04-2016 IPR003615 HNH nuclease APT61_RS11380 1918472889ae8435cb9371861f1838d1 136 PANTHER PTHR30574 10 136 1.4E-35 T 22-04-2016 APT61_RS11380 1918472889ae8435cb9371861f1838d1 136 PANTHER PTHR30574:SF1 10 136 1.4E-35 T 22-04-2016 APT61_RS11380 1918472889ae8435cb9371861f1838d1 136 Pfam PF04143 Sulphur transport 46 130 6.3E-7 T 22-04-2016 IPR007272 Sulphur transport domain APT61_RS09080 4cbd281a04a7e2e03983730f7973d5b2 244 PANTHER PTHR34979 1 241 1.1E-36 T 22-04-2016 APT61_RS09080 4cbd281a04a7e2e03983730f7973d5b2 244 Pfam PF03591 AzlC protein 26 165 7.3E-32 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease APT61_RS06255 149668fe1c36b29b28e30a5dfc7e6bbf 347 Pfam PF06674 Protein of unknown function (DUF1176) 26 347 1.0E-93 T 22-04-2016 IPR009560 Protein of unknown function DUF1176 APT61_RS04770 34b955b3467b6f7d2a5da0e8be902ed8 114 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 1 97 5.0E-45 T 22-04-2016 IPR020483 Uncharacterised protein family YgbA APT61_RS04770 34b955b3467b6f7d2a5da0e8be902ed8 114 Pfam PF11756 Nitrous oxide-stimulated promoter 4 106 4.3E-40 T 22-04-2016 IPR020483 Uncharacterised protein family YgbA APT61_RS06290 ba21742fcee365c2a944d6b2404b1d1b 149 Pfam PF11143 Protein of unknown function (DUF2919) 6 145 6.9E-50 T 22-04-2016 IPR021318 Protein of unknown function DUF2919 APT61_RS03035 ff7887acbc960cb1b1fa36105ff7ab07 101 PANTHER PTHR35893:SF2 1 101 7.6E-66 T 22-04-2016 APT61_RS03035 ff7887acbc960cb1b1fa36105ff7ab07 101 Gene3D G3DSA:1.20.120.20 12 75 6.3E-5 T 22-04-2016 APT61_RS03035 ff7887acbc960cb1b1fa36105ff7ab07 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 3.3E-31 T 22-04-2016 IPR010279 Protein of unknown function DUF883, ElaB APT61_RS03035 ff7887acbc960cb1b1fa36105ff7ab07 101 PANTHER PTHR35893 1 101 7.6E-66 T 22-04-2016 APT61_RS14495 6aa987fb8f4263467c7bc2df6bc495a0 135 Pfam PF14317 YcxB-like protein 73 127 2.5E-7 T 22-04-2016 IPR025588 YcxB-like protein APT61_RS09975 b9a5706d47ba50fb37c708ef0a6393ae 137 PANTHER PTHR35535 1 137 4.9E-28 T 22-04-2016 APT61_RS09975 b9a5706d47ba50fb37c708ef0a6393ae 137 Pfam PF03724 META domain 28 132 2.7E-21 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ APT61_RS05505 d16a4aedb6127a4b9ff63be3d8b04260 438 Gene3D G3DSA:3.40.50.300 202 289 1.2E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05505 d16a4aedb6127a4b9ff63be3d8b04260 438 Gene3D G3DSA:3.40.50.300 33 134 1.2E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05505 d16a4aedb6127a4b9ff63be3d8b04260 438 Pfam PF10923 P-loop Domain of unknown function (DUF2791) 6 407 4.4E-161 T 22-04-2016 IPR021228 Protein of unknown function DUF2791 APT61_RS05505 d16a4aedb6127a4b9ff63be3d8b04260 438 SUPERFAMILY SSF52540 238 298 1.03E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS05505 d16a4aedb6127a4b9ff63be3d8b04260 438 SUPERFAMILY SSF52540 33 121 1.03E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12630 54619b8e1ed9fbba44282608a82fc48c 78 Pfam PF07869 Protein of unknown function (DUF1656) 17 70 5.7E-16 T 22-04-2016 IPR012451 Protein of unknown function DUF1656 APT61_RS22135 0e69a38ea5bf4bac4df49b9a6d5760c4 445 Pfam PF00860 Permease family 32 405 1.9E-43 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS22135 0e69a38ea5bf4bac4df49b9a6d5760c4 445 PIRSF PIRSF005353 6 445 9.3E-176 T 22-04-2016 IPR026033 Purine permease PbuG-like APT61_RS22135 0e69a38ea5bf4bac4df49b9a6d5760c4 445 PANTHER PTHR11119:SF9 1 432 1.7E-183 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 APT61_RS22135 0e69a38ea5bf4bac4df49b9a6d5760c4 445 PANTHER PTHR11119 1 432 1.7E-183 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 APT61_RS15110 8898304b1f14d6c4dd0fc51af28faa5c 318 PANTHER PTHR38785 5 318 3.8E-98 T 22-04-2016 APT61_RS15110 8898304b1f14d6c4dd0fc51af28faa5c 318 Pfam PF04393 Protein of unknown function (DUF535) 36 313 1.5E-101 T 22-04-2016 IPR007488 Protein of unknown function DUF535 APT61_RS17500 e8d7489d50004fe89e4d07301ac347ac 457 PANTHER PTHR11785:SF352 1 452 0.0 T 22-04-2016 APT61_RS17500 e8d7489d50004fe89e4d07301ac347ac 457 Pfam PF00324 Amino acid permease 15 451 3.0E-104 T 22-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 APT61_RS17500 e8d7489d50004fe89e4d07301ac347ac 457 PIRSF PIRSF006060 1 455 8.1E-76 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS17500 e8d7489d50004fe89e4d07301ac347ac 457 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 22-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 APT61_RS17500 e8d7489d50004fe89e4d07301ac347ac 457 PANTHER PTHR11785 1 452 0.0 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 APT61_RS07095 074e298ba215ea93440c58fcda7d8c67 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 4.2E-99 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 APT61_RS07095 074e298ba215ea93440c58fcda7d8c67 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 46.592 T 22-04-2016 IPR007358 Nucleoid-associated protein NdpA GO:0009295 APT61_RS07095 074e298ba215ea93440c58fcda7d8c67 335 PANTHER PTHR38772 2 335 4.8E-184 T 22-04-2016 APT61_RS11385 3839332e4597591884e955fe5aea7182 143 PANTHER PTHR30574:SF1 9 138 2.3E-28 T 22-04-2016 APT61_RS11385 3839332e4597591884e955fe5aea7182 143 PANTHER PTHR30574 9 138 2.3E-28 T 22-04-2016 APT61_RS13350 f94c337632481757d413cdb1c7f31565 111 Pfam PF08748 Phage tail assembly chaperone 31 90 8.0E-7 T 22-04-2016 IPR014859 Phage tail assembly chaperone APT61_RS12235 f1e4ab6f5cad7d2d9219be5559b9e664 332 Pfam PF13884 Chaperone of endosialidase 213 260 1.5E-6 T 22-04-2016 IPR030392 Intramolecular chaperone auto-processing domain APT61_RS14935 f134e0b3944a33e35bb3f73ac42b6b2e 409 PANTHER PTHR30528 3 409 3.5E-130 T 22-04-2016 APT61_RS14935 f134e0b3944a33e35bb3f73ac42b6b2e 409 Pfam PF06224 Winged helix DNA-binding domain 38 381 2.9E-82 T 22-04-2016 IPR009351 Protein of unknown function DUF1006 APT61_RS00365 bcfadcdfc618afb166ae399eda5709e5 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 102 3.4E-12 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD APT61_RS20675 d71d81f1baee97bafa607a0ac49c7ebe 354 PIRSF PIRSF007313 1 354 2.8E-158 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 APT61_RS20675 d71d81f1baee97bafa607a0ac49c7ebe 354 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 3.0E-154 T 22-04-2016 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 APT61_RS09990 a39c889e51ab206cec300b65338ea3a0 878 Pfam PF11739 Dicarboxylate transport 657 857 3.4E-63 T 22-04-2016 IPR021730 Dicarboxylate transport APT61_RS17545 a68e5c8daa2c5ffd58f1e6539d06ba90 225 Pfam PF07302 AroM protein 5 224 1.1E-65 T 22-04-2016 IPR010843 Uncharacterised protein family AroM APT61_RS17545 a68e5c8daa2c5ffd58f1e6539d06ba90 225 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 5 223 3.0E-84 T 22-04-2016 IPR010843 Uncharacterised protein family AroM APT61_RS08695 c2b9f0bc4303e036c0fddb6fd35dc9f2 63 Pfam PF07358 Protein of unknown function (DUF1482) 1 57 9.7E-33 T 22-04-2016 IPR009954 Protein of unknown function DUF1482 APT61_RS19465 2787ea6477f7f82b1c396949b485ac91 414 Pfam PF05159 Capsule polysaccharide biosynthesis protein 83 389 9.4E-90 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 APT61_RS09675 9c0cef62a40e692654e153b101bb3cbd 74 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 4.7E-33 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 APT61_RS09675 9c0cef62a40e692654e153b101bb3cbd 74 Pfam PF06667 Phage shock protein B 3 73 1.9E-32 T 22-04-2016 IPR009554 Phage shock protein B GO:0006355|GO:0009271 APT61_RS05215 e69b561deb97d5f832ef43d524449502 111 SUPERFAMILY SSF160424 3 111 1.06E-13 T 22-04-2016 IPR006728 Protein of unknown function DUF600 APT61_RS10490 727d6aec3dbdff32ad0278c386a1b876 92 Pfam PF10798 Biofilm development protein YmgB/AriR 34 91 1.5E-19 T 22-04-2016 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 APT61_RS19130 6eac9dea0dda3fa3a7ab87ba865d266b 214 Pfam PF10144 Bacterial virulence factor haemolysin 1 160 5.3E-64 T 22-04-2016 IPR019305 Uncharacterised protein family Smp APT61_RS13625 26cd68ca68b4e0a3c0592a57d0d2b502 91 Pfam PF13856 ATP-binding sugar transporter from pro-phage 1 89 8.3E-15 T 22-04-2016 IPR025601 ATP-binding sugar transporter-like protein APT61_RS13625 26cd68ca68b4e0a3c0592a57d0d2b502 91 SUPERFAMILY SSF69279 1 91 4.59E-30 T 22-04-2016 APT61_RS13625 26cd68ca68b4e0a3c0592a57d0d2b502 91 Gene3D G3DSA:2.40.10.210 23 91 1.1E-30 T 22-04-2016 APT61_RS14190 fe2eb779fd0aeb36a5eaf320be8d1694 75 Pfam PF07119 Protein of unknown function (DUF1375) 9 69 3.7E-10 T 22-04-2016 IPR010780 Protein of unknown function DUF1375 APT61_RS13820 41d856e583307f871f7b2e5a5fcf1048 373 Pfam PF08007 Cupin superfamily protein 10 310 4.1E-102 T 22-04-2016 IPR003347 JmjC domain APT61_RS13820 41d856e583307f871f7b2e5a5fcf1048 373 SUPERFAMILY SSF51197 7 292 7.14E-75 T 22-04-2016 APT61_RS13820 41d856e583307f871f7b2e5a5fcf1048 373 PANTHER PTHR13096 7 337 3.8E-73 T 22-04-2016 APT61_RS13820 41d856e583307f871f7b2e5a5fcf1048 373 Gene3D G3DSA:2.60.120.650 7 205 2.3E-44 T 22-04-2016 APT61_RS13820 41d856e583307f871f7b2e5a5fcf1048 373 SMART SM00558 92 215 1.7E-7 T 22-04-2016 IPR003347 JmjC domain APT61_RS01780 85843357ff881244e5adb40dfe798ee3 259 SUPERFAMILY SSF53067 46 164 1.55E-5 T 22-04-2016 APT61_RS16060 63933ab9dcd5da74ad1312678ebe4311 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 2.0E-20 T 22-04-2016 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545|UniPathway: UPA00705 APT61_RS16060 63933ab9dcd5da74ad1312678ebe4311 37 Pfam PF08173 Membrane bound YbgT-like protein 1 26 9.7E-15 T 22-04-2016 IPR012994 Membrane bound YbgT-like APT61_RS20605 fd21ad48ea0fad84f517f84057885be9 428 Pfam PF10082 Putative beta-barrel porin 2 36 424 3.0E-13 T 22-04-2016 IPR018759 Putative beta-barrel porin 2 APT61_RS03330 0d02646fbd599fe429560cca89c4478c 71 Pfam PF16080 Bacteriophage holin family HP1 4 55 2.3E-12 T 22-04-2016 IPR032118 Bacteriophage holin HP1 family APT61_RS04710 f4d9867db1227c73527c5fec29f08605 107 Pfam PF12084 Protein of unknown function (DUF3561) 1 107 6.7E-45 T 22-04-2016 IPR022721 Protein of unknown function DUF3561 APT61_RS04710 f4d9867db1227c73527c5fec29f08605 107 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 6 107 1.0E-33 T 22-04-2016 IPR022721 Protein of unknown function DUF3561 APT61_RS14230 b4c7834f78b0bbffe086279b6db5f91a 149 PANTHER PTHR34771 1 149 1.6E-26 T 22-04-2016 APT61_RS14230 b4c7834f78b0bbffe086279b6db5f91a 149 Pfam PF07012 Curlin associated repeat 73 104 5.4E-9 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 APT61_RS14230 b4c7834f78b0bbffe086279b6db5f91a 149 Pfam PF07012 Curlin associated repeat 95 128 2.1E-8 T 22-04-2016 IPR009742 Curlin associated GO:0007155|GO:0009289 APT61_RS20465 c38255c96f0a19360f626f7ccb3ef9a6 43 Pfam PF08085 Entericidin EcnA/B family 22 42 5.2E-9 T 22-04-2016 IPR012556 Entericidin A/B GO:0009636|GO:0016020 APT61_RS08330 29c46e356c340433da134df4a8130512 111 Pfam PF13992 YecR-like lipoprotein 29 98 7.0E-25 T 22-04-2016 IPR025731 YecR-like lipoprotein APT61_RS03390 464dc6873e8fab7da72833997713bbc4 138 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 10 130 1.1E-18 T 22-04-2016 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly APT61_RS13620 94deb6b8e7f418729a1aecf81ad74dc2 184 PIRSF PIRSF004395 1 184 5.4E-83 T 22-04-2016 IPR010633 Bacteriophage lambda, GpZ, minor tail APT61_RS13620 94deb6b8e7f418729a1aecf81ad74dc2 184 Pfam PF06763 Prophage minor tail protein Z (GPZ) 3 184 9.6E-70 T 22-04-2016 IPR010633 Bacteriophage lambda, GpZ, minor tail APT61_RS12425 3b317b66a0376c6dee7758da49d27889 198 Pfam PF07105 Protein of unknown function (DUF1367) 1 196 1.8E-91 T 22-04-2016 IPR009797 Protein of unknown function DUF1367 APT61_RS10885 9a168f2f019b032730791c23719e0723 234 Gene3D G3DSA:2.120.10.10 57 119 7.2E-4 T 22-04-2016 IPR011040 Sialidases APT61_RS15965 ab0497032f9d9b4ff0953b972b320fbb 165 Pfam PF13985 YbgS-like protein 3 78 1.6E-22 T 22-04-2016 IPR020363 Uncharacterised protein family YbgS APT61_RS15965 ab0497032f9d9b4ff0953b972b320fbb 165 Pfam PF13985 YbgS-like protein 98 165 7.9E-12 T 22-04-2016 IPR020363 Uncharacterised protein family YbgS APT61_RS15965 ab0497032f9d9b4ff0953b972b320fbb 165 ProDom PD079292 YBGS HOMEOBOX PRECURSOR SIGNAL PROBABLE SECRETED 117 165 5.0E-9 T 22-04-2016 IPR020363 Uncharacterised protein family YbgS APT61_RS17610 e63643972772c3a006c314d55028d23c 100 Pfam PF10954 Protein of unknown function (DUF2755) 1 99 2.3E-46 T 22-04-2016 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 APT61_RS17610 e63643972772c3a006c314d55028d23c 100 ProDom PD068630 MEMBRANE INNER YAIY TRANSMEMBRANE 1 98 5.0E-32 T 22-04-2016 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 APT61_RS15305 c9827d6b0dd826e161032e525c5a74f9 162 Pfam PF10767 Protein of unknown function (DUF2593) 21 160 1.2E-62 T 22-04-2016 IPR019703 Protein of unknown function DUF2593 APT61_RS18160 48ac4295f10ddba799696f70fd1b71d6 86 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 9 83 7.4E-28 T 22-04-2016 IPR009778 Modulator of Rho-dependent transcription termination APT61_RS18160 48ac4295f10ddba799696f70fd1b71d6 86 SUPERFAMILY SSF101744 1 85 2.25E-29 T 22-04-2016 IPR023534 Rof/RNase P-like APT61_RS10770 4213ffb3f24692d589a2abd58b24c43a 353 Pfam PF13360 PQQ-like domain 165 305 4.4E-5 T 22-04-2016 IPR002372 Pyrrolo-quinoline quinone repeat APT61_RS10770 4213ffb3f24692d589a2abd58b24c43a 353 SUPERFAMILY SSF51004 37 339 2.35E-38 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain APT61_RS10770 4213ffb3f24692d589a2abd58b24c43a 353 Gene3D G3DSA:2.130.10.10 45 332 2.3E-38 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 APT61_RS12510 82389f8dc83c6168597c17cf0998e49f 72 Pfam PF06806 Putative excisionase (DUF1233) 5 72 1.3E-17 T 22-04-2016 IPR009634 Bacteriophage 933W, Xis excisionase APT61_RS05700 07c9c886cf322b9a1658365a70a0c838 151 Pfam PF14328 Domain of unknown function (DUF4385) 7 149 3.1E-67 T 22-04-2016 IPR025494 Protein of unknown function DUF4385 APT61_RS14135 24a883169d5625cfe82bd33b4ae8f6a2 186 Pfam PF07273 Protein of unknown function (DUF1439) 27 178 2.4E-52 T 22-04-2016 IPR010835 Protein of unknown function DUF1439 APT61_RS03380 17c752f45f647e7a5c3a27ecf3ee876e 173 Pfam PF09684 Phage tail protein (Tail_P2_I) 5 140 1.5E-45 T 22-04-2016 IPR006521 Tail protein I APT61_RS03380 17c752f45f647e7a5c3a27ecf3ee876e 173 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 5 141 1.2E-51 T 22-04-2016 IPR006521 Tail protein I APT61_RS06175 4a239a60e7a839d51038d4329bf99f70 353 Pfam PF01594 Domain of unknown function DUF20 20 345 5.7E-83 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APT61_RS06175 4a239a60e7a839d51038d4329bf99f70 353 PANTHER PTHR21716 6 347 3.6E-157 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like APT61_RS06175 4a239a60e7a839d51038d4329bf99f70 353 PANTHER PTHR21716:SF19 6 347 3.6E-157 T 22-04-2016 APT61_RS12495 9b4fe45af1495c8f69ec0dc5be6f5d33 996 Pfam PF06630 Enterobacterial exodeoxyribonuclease VIII 4 197 3.9E-39 T 22-04-2016 IPR010584 Exodeoxyribonuclease 8 GO:0051908|GO:0090305 APT61_RS12495 9b4fe45af1495c8f69ec0dc5be6f5d33 996 Pfam PF12684 PDDEXK-like domain of unknown function (DUF3799) 708 972 2.8E-14 T 22-04-2016 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain APT61_RS14160 09eb18c6ce602a2187911e64b4f05c27 188 PANTHER PTHR30529:SF5 2 184 1.9E-88 T 22-04-2016 APT61_RS14160 09eb18c6ce602a2187911e64b4f05c27 188 SUPERFAMILY SSF81342 5 181 6.98E-37 T 22-04-2016 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 APT61_RS14160 09eb18c6ce602a2187911e64b4f05c27 188 Pfam PF01292 Prokaryotic cytochrome b561 9 180 9.5E-27 T 22-04-2016 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 APT61_RS14160 09eb18c6ce602a2187911e64b4f05c27 188 PANTHER PTHR30529 2 184 1.9E-88 T 22-04-2016 APT61_RS03315 19cadd0c2776511b6a8632c6ed19e258 216 Pfam PF05944 Phage small terminase subunit 35 163 1.1E-43 T 22-04-2016 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 APT61_RS00065 7877fb82ffac8cceb67d0c1f3a825658 321 PANTHER PTHR32196 9 321 1.8E-141 T 22-04-2016 APT61_RS00065 7877fb82ffac8cceb67d0c1f3a825658 321 PANTHER PTHR32196:SF21 9 321 1.8E-141 T 22-04-2016 APT61_RS00065 7877fb82ffac8cceb67d0c1f3a825658 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 7.0E-50 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 APT61_RS14535 882ae7c4b37f3e1416af0a6abd0384d9 331 Pfam PF03916 Polysulphide reductase, NrfD 8 281 1.4E-27 T 22-04-2016 IPR005614 NrfD family APT61_RS13720 d8ab0b2af60f506a00b95c4954618525 110 Gene3D G3DSA:1.10.10.10 7 46 6.6E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain APT61_RS19460 5e021f85f9f86d12c0f99e87bb1fcaa5 667 Pfam PF05159 Capsule polysaccharide biosynthesis protein 128 302 4.6E-29 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 APT61_RS19460 5e021f85f9f86d12c0f99e87bb1fcaa5 667 Pfam PF05159 Capsule polysaccharide biosynthesis protein 40 110 5.3E-9 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 APT61_RS19460 5e021f85f9f86d12c0f99e87bb1fcaa5 667 Pfam PF05159 Capsule polysaccharide biosynthesis protein 387 441 5.0E-6 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 APT61_RS19460 5e021f85f9f86d12c0f99e87bb1fcaa5 667 Pfam PF05159 Capsule polysaccharide biosynthesis protein 473 620 3.6E-25 T 22-04-2016 IPR007833 Capsule polysaccharide biosynthesis GO:0000271|GO:0015774 APT61_RS17575 9ec9f3f8cd2c0837075d22f4fc39f125 106 Pfam PF07769 psiF repeat 26 59 1.8E-18 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat APT61_RS17575 9ec9f3f8cd2c0837075d22f4fc39f125 106 Pfam PF07769 psiF repeat 71 103 4.3E-16 T 22-04-2016 IPR011690 Phosphate-starvation-induced PsiF repeat APT61_RS20630 0cc05ce1b9522d679d026bee1a369b51 785 Pfam PF00350 Dynamin family 80 285 1.1E-18 T 22-04-2016 IPR022812 Dynamin superfamily APT61_RS20630 0cc05ce1b9522d679d026bee1a369b51 785 SUPERFAMILY SSF52540 215 354 1.33E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20630 0cc05ce1b9522d679d026bee1a369b51 785 SUPERFAMILY SSF52540 59 138 1.33E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20630 0cc05ce1b9522d679d026bee1a369b51 785 Gene3D G3DSA:3.40.50.300 222 330 2.1E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS20630 0cc05ce1b9522d679d026bee1a369b51 785 Gene3D G3DSA:3.40.50.300 77 152 2.1E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase APT61_RS12255 188e73d349b48a7c560b79bd5e642453 197 Pfam PF06805 Bacteriophage lambda tail assembly protein I 6 58 4.0E-8 T 22-04-2016 IPR010654 Bacteriophage lambda tail assembly I APT61_RS21805 c3ae73c6c26fd5a4b0fa50482142458c 59 Pfam PF13132 Domain of unknown function (DUF3950) 25 50 2.5E-8 T 22-04-2016 IPR025030 Domain of unknown function DUF3950 APT61_RS16145 55770bb0b65c6ca06424b11beb36659a 331 Pfam PF06166 Protein of unknown function (DUF979) 7 330 3.6E-129 T 22-04-2016 IPR009323 Protein of unknown function DUF979 APT61_RS21390 23f6ae5a6dd8e81351008682d4eebeae 100 Pfam PF13983 YsaB-like lipoprotein 26 100 6.1E-41 T 22-04-2016 IPR025728 YsaB-like lipoprotein APT61_RS05255 0ce0282cead4551e91736ff6b5d5abfa 110 SUPERFAMILY SSF160424 5 110 1.44E-17 T 22-04-2016 IPR006728 Protein of unknown function DUF600 APT61_RS01510 09c3f73114c6a96e6d673c328378d4b5 671 Pfam PF09972 Predicted membrane protein (DUF2207) 48 603 5.0E-65 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane APT61_RS16600 67bfccf508fcd5ea685a12adbf74c33b 154 Pfam PF07670 Nucleoside recognition 29 128 1.4E-6 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 APT61_RS10735 4e7a404f95ad06bd94d98b59b8dca48b 77 Pfam PF10735 Protein of unknown function (DUF2526) 1 77 5.1E-38 T 22-04-2016 IPR019671 Protein of unknown function DUF2526 APT61_RS07065 1b6c4670cb1ec84bd75eff1da1356ad9 86 Pfam PF10749 Protein of unknown function (DUF2534) 4 82 5.5E-34 T 22-04-2016 IPR019685 Protein of unknown function DUF2534 APT61_RS03250 d7538b62cb73b818fca157cecaa5829b 113 ProDom PD073252 TRANSPOSABLE STY4640 FELS-2 RETRON ORFC C0938 ELEMENT STY3664 EC67 PHAGE-RELATED 1 111 2.0E-50 T 22-04-2016 APT61_RS19225 f74ce741608730ae4c781f68c9be05b1 76 Pfam PF07256 Protein of unknown function (DUF1435) 1 75 1.4E-28 T 22-04-2016 IPR009885 Protein of unknown function DUF1435 APT61_RS19225 f74ce741608730ae4c781f68c9be05b1 76 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 1 76 2.0E-22 T 22-04-2016 IPR009885 Protein of unknown function DUF1435 APT61_RS08750 9d8b0d1343324520d3bdf56a1830d876 79 Pfam PF13996 YobH-like protein 2 71 2.5E-36 T 22-04-2016 IPR025611 YobH-like protein APT61_RS06670 896eb23f8bb1408a637452780f6c168c 334 PIRSF PIRSF020588 1 334 4.8E-164 T 22-04-2016 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 APT61_RS05160 e7f440044d6fe55154952293bd0da0ae 514 PANTHER PTHR31610 8 504 1.5E-118 T 22-04-2016 APT61_RS09550 1eb336cd03939177b029a2e3d6d41c08 83 Pfam PF10692 Protein of unknown function (DUF2498) 5 81 2.2E-41 T 22-04-2016 IPR019633 Protein of unknown function DUF2498 APT61_RS04675 a68546454cdfe43e36fec943170abe10 130 Pfam PF15607 Bacterial toxin 44 39 126 8.5E-17 T 22-04-2016 IPR028946 Bacterial toxin 44 APT61_RS10915 2e47b8dc69ae75d130b7e009e168271e 85 Pfam PF05488 PAAR motif 13 75 1.8E-12 T 22-04-2016 IPR008727 PAAR motif APT61_RS00010 4f30abab3727f9410c90b32e2535e4a4 126 Pfam PF03899 ATP synthase I chain 13 108 3.4E-15 T 22-04-2016 IPR005598 ATP synthase protein I APT61_RS12310 de30bedc92f2843bb7c0766594b6c4d2 149 Pfam PF13554 Bacteriophage related domain of unknown function 9 145 8.7E-32 T 22-04-2016 IPR025395 Protein of unknown function DUF4128 APT61_RS13095 f86810f39a7b463775258a4ccd006cc9 79 Pfam PF10729 Cell division activator CedA 1 77 3.9E-48 T 22-04-2016 IPR019666 Cell division activator CedA GO:0003677|GO:0051301 APT61_RS04985 467306a0828d6fa9f452f17d70e29e9d 152 Pfam PF11046 Transcriptional repressor of hyc and hyp operons 1 145 2.3E-49 T 22-04-2016 IPR021285 Transcription regulator, HycA APT61_RS19630 e3f167619c8fcf8488994ef8c9e8f741 77 Pfam PF09939 Uncharacterized protein conserved in bacteria (DUF2171) 7 69 1.7E-30 T 22-04-2016 IPR018684 Protein of unknown function DUF2171 APT61_RS03310 31d6524e194f10d8d7922fe64d38d648 353 Pfam PF05125 Phage major capsid protein, P2 family 9 338 5.4E-149 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 APT61_RS03310 31d6524e194f10d8d7922fe64d38d648 353 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 7 340 1.0E-100 T 22-04-2016 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 APT61_RS08265 65c1cb253552b4c8bc0221dfb977827c 118 Pfam PF02411 MerT mercuric transport protein 1 113 2.9E-9 T 22-04-2016 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 APT61_RS03235 4fd52881ffdf6a625f079bf17c018c3a 144 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 44 137 2.8E-26 T 22-04-2016 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 APT61_RS20625 18e09f1f92760eeab0dfb7a7a8f4ffbf 292 Pfam PF13990 YjcZ-like protein 21 290 2.6E-111 T 22-04-2016 IPR025599 YjcZ-like protein APT61_RS13875 6a692b509dc63acb8fd92ddfb39afd69 357 Pfam PF01757 Acyltransferase family 7 326 2.2E-18 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 APT61_RS03405 754177feb9a82c0d02459fc407200d72 100 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 9 88 1.3E-14 T 22-04-2016 IPR019289 Bacteriophage tail protein Gp41, putative APT61_RS12200 55ccfac39f8cf2864afefe7c3124d504 521 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 480 6.4E-135 T 22-04-2016 IPR010352 Protein of unknown function DUF945 APT61_RS15260 70ba5f281febed357985311d5f85520f 172 Pfam PF12883 Protein of unknown function (DUF3828) 41 155 3.0E-23 T 22-04-2016 IPR024289 Domain of unknown function DUF3828 APT61_RS15330 b491f546188756ad1ea18645beb1db41 158 Pfam PF10722 Putative bacterial sensory transduction regulator 8 129 2.1E-12 T 22-04-2016 IPR019660 Putative sensory transduction regulator YbjN APT61_RS12405 4309f96efb3df8fe5192aace5d826957 46 ProDom PD026569 PROPHAGE GIFSY-1 3'REGION ORF45 C1558 RUSA LAMBDOID YLCG DLP12 22 43 0.001 T 22-04-2016 APT61_RS01795 e2bc4d63706a0e854f5c05974ed4246d 131 Pfam PF10748 Protein of unknown function (DUF2531) 10 128 5.2E-24 T 22-04-2016 IPR019684 Protein of unknown function DUF2531 APT61_RS17170 a3f425c51a5a4ce3b4a2d7223225d99e 130 Pfam PF10757 Biofilm formation regulator YbaJ 1 116 1.5E-60 T 22-04-2016 IPR019693 Biofilm formation regulator YbaJ APT61_RS14250 0d44cf2257a3f47bd6d1e3f8a24cdb91 277 Pfam PF03783 Curli production assembly/transport component CsgG 41 255 2.1E-79 T 22-04-2016 IPR005534 Curli production assembly/transport component CsgG GO:0030288 APT61_RS10810 cd45846372602fea06d0f8637f02c333 415 Pfam PF05231 MASE1 12 290 1.6E-17 T 22-04-2016 IPR007895 MASE1