locus-tag class description GJD98_RS00005 PF00308 Bacterial dnaA protein GJD98_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix GJD98_RS00005 PF11638 DnaA N-terminal domain GJD98_RS00010 PF02767 DNA polymerase III beta subunit, central domain GJD98_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain GJD98_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain GJD98_RS00015 PF02463 RecF/RecN/SMC N terminal domain GJD98_RS00020 PF01751 Toprim domain GJD98_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS00020 PF18053 DNA gyrase B subunit insert domain GJD98_RS00020 PF00204 DNA gyrase B GJD98_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus GJD98_RS00025 PF04371 Porphyromonas-type peptidyl-arginine deiminase GJD98_RS00030 PF17944 Arginine decarboxylase C-terminal helical extension GJD98_RS00030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain GJD98_RS00030 PF17810 Arginine decarboxylase helical bundle domain GJD98_RS00045 PF17209 Hfq protein GJD98_RS00050 PF13167 GTP-binding GTPase N-terminal GJD98_RS00050 PF16360 GTP-binding GTPase Middle Region GJD98_RS00050 PF01926 50S ribosome-binding GTPase GJD98_RS00055 PF00578 AhpC/TSA family GJD98_RS00065 PF05726 Pirin C-terminal cupin domain GJD98_RS00065 PF02678 Pirin GJD98_RS00075 PF00529 HlyD membrane-fusion protein of T1SS GJD98_RS00075 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJD98_RS00095 PF01447 Thermolysin metallopeptidase, catalytic domain GJD98_RS00095 PF03413 Peptidase propeptide and YPEB domain GJD98_RS00095 PF02868 Thermolysin metallopeptidase, alpha-helical domain GJD98_RS00095 PF07504 Fungalysin/Thermolysin Propeptide Motif GJD98_RS00095 PF04151 Bacterial pre-peptidase C-terminal domain GJD98_RS00105 PF04751 Protein of unknown function (DUF615) GJD98_RS00110 PF01170 Putative RNA methylase family UPF0020 GJD98_RS00110 PF10672 S-adenosylmethionine-dependent methyltransferase GJD98_RS00125 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP GJD98_RS00130 PF13520 Amino acid permease GJD98_RS00135 PF01384 Phosphate transporter family GJD98_RS00140 PF03232 Ubiquinone biosynthesis protein COQ7 GJD98_RS00145 PF00563 EAL domain GJD98_RS00145 PF03707 Bacterial signalling protein N terminal repeat GJD98_RS00145 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS00155 PF02225 PA domain GJD98_RS00155 PF04389 Peptidase family M28 GJD98_RS00165 PF02392 Ycf4 GJD98_RS00175 PF10677 Protein of unknown function (DUF2490) GJD98_RS00180 PF00497 Bacterial extracellular solute-binding proteins, family 3 GJD98_RS00215 PF01062 Bestrophin, RFP-TM, chloride channel GJD98_RS00240 PF00132 Bacterial transferase hexapeptide (six repeats) GJD98_RS00250 PF13520 Amino acid permease GJD98_RS00280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJD98_RS00280 PF03466 LysR substrate binding domain GJD98_RS00290 PF00376 MerR family regulatory protein GJD98_RS00290 PF09278 MerR, DNA binding GJD98_RS00295 PF00462 Glutaredoxin GJD98_RS00330 PF01474 Class-II DAHP synthetase family GJD98_RS00345 PF02655 ATP-grasp domain GJD98_RS00345 PF00206 Lyase GJD98_RS00365 PF00155 Aminotransferase class I and II GJD98_RS00370 PF00271 Helicase conserved C-terminal domain GJD98_RS00370 PF02151 UvrB/uvrC motif GJD98_RS00370 PF12344 Ultra-violet resistance protein B GJD98_RS00370 PF04851 Type III restriction enzyme, res subunit GJD98_RS00370 PF17757 UvrB interaction domain GJD98_RS00380 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS00380 PF01590 GAF domain GJD98_RS00380 PF00563 EAL domain GJD98_RS00380 PF00360 Phytochrome region GJD98_RS00385 PF01645 Conserved region in glutamate synthase GJD98_RS00390 PF05164 Cell division protein ZapA GJD98_RS00395 PF03695 Uncharacterised protein family (UPF0149) GJD98_RS00400 PF00557 Metallopeptidase family M24 GJD98_RS00400 PF05195 Aminopeptidase P, N-terminal domain GJD98_RS00405 PF01494 FAD binding domain GJD98_RS00410 PF01494 FAD binding domain GJD98_RS00430 PF08443 RimK-like ATP-grasp domain GJD98_RS00430 PF18030 RimK PreATP-grasp domain GJD98_RS00440 PF08443 RimK-like ATP-grasp domain GJD98_RS00440 PF18030 RimK PreATP-grasp domain GJD98_RS00460 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 GJD98_RS00475 PF00575 S1 RNA binding domain GJD98_RS00475 PF17876 Cold shock domain GJD98_RS00475 PF08461 Ribonuclease R winged-helix domain GJD98_RS00475 PF08206 Ribonuclease B OB domain GJD98_RS00475 PF00773 RNB domain GJD98_RS00480 PF00588 SpoU rRNA Methylase family GJD98_RS00480 PF08032 RNA 2'-O ribose methyltransferase substrate binding GJD98_RS00485 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) GJD98_RS00500 PF03831 PhnA domain GJD98_RS00500 PF08274 PhnA Zinc-Ribbon GJD98_RS00510 PF01612 3'-5' exonuclease GJD98_RS00510 PF00476 DNA polymerase family A GJD98_RS00510 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain GJD98_RS00510 PF01367 5'-3' exonuclease, C-terminal SAM fold GJD98_RS00515 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GJD98_RS00515 PF00132 Bacterial transferase hexapeptide (six repeats) GJD98_RS00525 PF00109 Beta-ketoacyl synthase, N-terminal domain GJD98_RS00525 PF02801 Beta-ketoacyl synthase, C-terminal domain GJD98_RS00535 PF01625 Peptide methionine sulfoxide reductase GJD98_RS00545 PF00860 Permease family GJD98_RS00580 PF08668 HDOD domain GJD98_RS00580 PF00563 EAL domain GJD98_RS00585 PF02347 Glycine cleavage system P-protein GJD98_RS00595 PF02347 Glycine cleavage system P-protein GJD98_RS00600 PF01597 Glycine cleavage H-protein GJD98_RS00605 PF08669 Glycine cleavage T-protein C-terminal barrel domain GJD98_RS00605 PF01571 Aminomethyltransferase folate-binding domain GJD98_RS00625 PF00005 ABC transporter GJD98_RS00630 PF01323 DSBA-like thioredoxin domain GJD98_RS00635 PF00034 Cytochrome c GJD98_RS00640 PF01926 50S ribosome-binding GTPase GJD98_RS00650 PF16177 Acetyl-coenzyme A synthetase N-terminus GJD98_RS00650 PF13193 AMP-binding enzyme C-terminal domain GJD98_RS00650 PF00501 AMP-binding enzyme GJD98_RS00655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase GJD98_RS00655 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase GJD98_RS00660 PF00171 Aldehyde dehydrogenase family GJD98_RS00665 PF07311 Dodecin GJD98_RS00675 PF01113 Dihydrodipicolinate reductase, N-terminus GJD98_RS00675 PF05173 Dihydrodipicolinate reductase, C-terminus GJD98_RS00700 PF02887 Pyruvate kinase, alpha/beta domain GJD98_RS00700 PF00224 Pyruvate kinase, barrel domain GJD98_RS00705 PF00162 Phosphoglycerate kinase GJD98_RS00710 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain GJD98_RS00710 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain GJD98_RS00715 PF02779 Transketolase, pyrimidine binding domain GJD98_RS00715 PF00456 Transketolase, thiamine diphosphate binding domain GJD98_RS00715 PF02780 Transketolase, C-terminal domain GJD98_RS00725 PF01432 Peptidase family M3 GJD98_RS00735 PF02281 Transposase Tn5 dimerisation domain GJD98_RS00735 PF01609 Transposase DDE domain GJD98_RS00735 PF14706 Transposase DNA-binding GJD98_RS00740 PF01610 Transposase GJD98_RS00740 PF13542 Helix-turn-helix domain of transposase family ISL3 GJD98_RS00740 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 GJD98_RS00810 PF13426 PAS domain GJD98_RS00810 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS00810 PF00563 EAL domain GJD98_RS00815 PF00563 EAL domain GJD98_RS00815 PF12792 CSS motif domain associated with EAL GJD98_RS00820 PF00557 Metallopeptidase family M24 GJD98_RS00860 PF05661 Protein of unknown function (DUF808) GJD98_RS00865 PF03462 PCRF domain GJD98_RS00865 PF00472 RF-1 domain GJD98_RS00895 PF03466 LysR substrate binding domain GJD98_RS00895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJD98_RS00910 PF01494 FAD binding domain GJD98_RS00915 PF07690 Major Facilitator Superfamily GJD98_RS00920 PF00206 Lyase GJD98_RS00920 PF02655 ATP-grasp domain GJD98_RS00925 PF01209 ubiE/COQ5 methyltransferase family GJD98_RS00930 PF01435 Peptidase family M48 GJD98_RS00955 PF00005 ABC transporter GJD98_RS00960 PF02653 Branched-chain amino acid transport system / permease component GJD98_RS00965 PF01546 Peptidase family M20/M25/M40 GJD98_RS00965 PF07687 Peptidase dimerisation domain GJD98_RS00970 PF02515 CoA-transferase family III GJD98_RS01000 PF00141 Peroxidase GJD98_RS01015 PF01906 Putative heavy-metal-binding GJD98_RS01025 PF18416 N-acetylglucosamine binding protein domain 2 GJD98_RS01025 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading GJD98_RS01035 PF01654 Cytochrome bd terminal oxidase subunit I GJD98_RS01040 PF02322 Cytochrome bd terminal oxidase subunit II GJD98_RS01055 PF02645 Uncharacterised protein, DegV family COG1307 GJD98_RS01065 PF04244 Deoxyribodipyrimidine photo-lyase-related protein GJD98_RS01080 PF00069 Protein kinase domain GJD98_RS01080 PF03793 PASTA domain GJD98_RS01100 PF03441 FAD binding domain of DNA photolyase GJD98_RS01100 PF00875 DNA photolyase GJD98_RS01105 PF04172 LrgB-like family GJD98_RS01110 PF03788 LrgA family GJD98_RS01115 PF03466 LysR substrate binding domain GJD98_RS01115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJD98_RS01120 PF03884 DNA gyrase inhibitor YacG GJD98_RS01125 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain GJD98_RS01125 PF02222 ATP-grasp domain GJD98_RS01130 PF00731 AIR carboxylase GJD98_RS01145 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) GJD98_RS01150 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GJD98_RS01150 PF00361 Proton-conducting membrane transporter GJD98_RS01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJD98_RS01155 PF03466 LysR substrate binding domain GJD98_RS01160 PF00005 ABC transporter GJD98_RS01160 PF03412 Peptidase C39 family GJD98_RS01160 PF00664 ABC transporter transmembrane region GJD98_RS01180 PF13520 Amino acid permease GJD98_RS01190 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS01190 PF17158 Membrane-associated sensor, integral membrane domain GJD98_RS01195 PF00403 Heavy-metal-associated domain GJD98_RS01200 PF01475 Ferric uptake regulator family GJD98_RS01205 PF00205 Thiamine pyrophosphate enzyme, central domain GJD98_RS01205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GJD98_RS01205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GJD98_RS01210 PF12252 Dot/Icm substrate protein GJD98_RS01230 PF00171 Aldehyde dehydrogenase family GJD98_RS01235 PF00202 Aminotransferase class-III GJD98_RS01245 PF04960 Glutaminase GJD98_RS01250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GJD98_RS01250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GJD98_RS01250 PF01842 ACT domain GJD98_RS01260 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJD98_RS01260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GJD98_RS01265 PF05088 Bacterial NAD-glutamate dehydrogenase GJD98_RS01280 PF03960 ArsC family GJD98_RS01290 PF00271 Helicase conserved C-terminal domain GJD98_RS01290 PF00270 DEAD/DEAH box helicase GJD98_RS01300 PF02592 Putative vitamin uptake transporter GJD98_RS01315 PF02321 Outer membrane efflux protein GJD98_RS01325 PF13533 Biotin-lipoyl like GJD98_RS01355 PF03167 Uracil DNA glycosylase superfamily GJD98_RS01370 PF07731 Multicopper oxidase GJD98_RS01370 PF07732 Multicopper oxidase GJD98_RS01370 PF00394 Multicopper oxidase GJD98_RS01380 PF01544 CorA-like Mg2+ transporter protein GJD98_RS01390 PF05872 Bacterial protein of unknown function (DUF853) GJD98_RS01395 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain GJD98_RS01395 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain GJD98_RS01395 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family GJD98_RS01400 PF00857 Isochorismatase family GJD98_RS01410 PF07690 Major Facilitator Superfamily GJD98_RS01415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJD98_RS01415 PF03466 LysR substrate binding domain GJD98_RS01430 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS01430 PF00563 EAL domain GJD98_RS01430 PF03707 Bacterial signalling protein N terminal repeat GJD98_RS01435 PF00989 PAS fold GJD98_RS01435 PF00512 His Kinase A (phospho-acceptor) domain GJD98_RS01435 PF18415 Histidine kinase receptor ArcB trans-membrane domain GJD98_RS01435 PF01627 Hpt domain GJD98_RS01435 PF00072 Response regulator receiver domain GJD98_RS01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS01445 PF03466 LysR substrate binding domain GJD98_RS01445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJD98_RS01450 PF13520 Amino acid permease GJD98_RS01455 PF01209 ubiE/COQ5 methyltransferase family GJD98_RS01460 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GJD98_RS01460 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GJD98_RS01475 PF00106 short chain dehydrogenase GJD98_RS01485 PF01132 Elongation factor P (EF-P) OB domain GJD98_RS01485 PF09285 Elongation factor P, C-terminal GJD98_RS01485 PF08207 Elongation factor P (EF-P) KOW-like domain GJD98_RS01490 PF04055 Radical SAM superfamily GJD98_RS01495 PF13089 Polyphosphate kinase N-terminal domain GJD98_RS01495 PF02503 Polyphosphate kinase middle domain GJD98_RS01495 PF13090 Polyphosphate kinase C-terminal domain 2 GJD98_RS01495 PF17941 Polyphosphate kinase C-terminal domain 1 GJD98_RS01515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJD98_RS01515 PF02770 Acyl-CoA dehydrogenase, middle domain GJD98_RS01515 PF09317 Domain of unknown function (DUF1974) GJD98_RS01515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJD98_RS01525 PF00483 Nucleotidyl transferase GJD98_RS01530 PF01636 Phosphotransferase enzyme family GJD98_RS01535 PF03968 OstA-like protein GJD98_RS01535 PF04453 LPS transport system D GJD98_RS01540 PF00639 PPIC-type PPIASE domain GJD98_RS01540 PF09312 SurA N-terminal domain GJD98_RS01545 PF04166 Pyridoxal phosphate biosynthetic protein PdxA GJD98_RS01550 PF00186 Dihydrofolate reductase GJD98_RS01600 PF03144 Elongation factor Tu domain 2 GJD98_RS01600 PF00009 Elongation factor Tu GTP binding domain GJD98_RS01600 PF03143 Elongation factor Tu C-terminal domain GJD98_RS01610 PF00584 SecE/Sec61-gamma subunits of protein translocation complex GJD98_RS01615 PF02357 Transcription termination factor nusG GJD98_RS01615 PF00467 KOW motif GJD98_RS01620 PF03946 Ribosomal protein L11, N-terminal domain GJD98_RS01620 PF00298 Ribosomal protein L11, RNA binding domain GJD98_RS01625 PF00687 Ribosomal protein L1p/L10e family GJD98_RS01630 PF00466 Ribosomal protein L10 GJD98_RS01635 PF00542 Ribosomal protein L7/L12 C-terminal domain GJD98_RS01635 PF16320 Ribosomal protein L7/L12 dimerisation domain GJD98_RS01640 PF10385 RNA polymerase beta subunit external 1 domain GJD98_RS01640 PF04561 RNA polymerase Rpb2, domain 2 GJD98_RS01640 PF04565 RNA polymerase Rpb2, domain 3 GJD98_RS01640 PF00562 RNA polymerase Rpb2, domain 6 GJD98_RS01640 PF04560 RNA polymerase Rpb2, domain 7 GJD98_RS01640 PF04563 RNA polymerase beta subunit GJD98_RS01645 PF04998 RNA polymerase Rpb1, domain 5 GJD98_RS01645 PF04997 RNA polymerase Rpb1, domain 1 GJD98_RS01645 PF00623 RNA polymerase Rpb1, domain 2 GJD98_RS01645 PF04983 RNA polymerase Rpb1, domain 3 GJD98_RS01645 PF05000 RNA polymerase Rpb1, domain 4 GJD98_RS01650 PF00164 Ribosomal protein S12/S23 GJD98_RS01655 PF00177 Ribosomal protein S7p/S5e GJD98_RS01660 PF00009 Elongation factor Tu GTP binding domain GJD98_RS01660 PF03144 Elongation factor Tu domain 2 GJD98_RS01660 PF03764 Elongation factor G, domain IV GJD98_RS01660 PF14492 Elongation Factor G, domain II GJD98_RS01660 PF00679 Elongation factor G C-terminus GJD98_RS01665 PF00009 Elongation factor Tu GTP binding domain GJD98_RS01665 PF03144 Elongation factor Tu domain 2 GJD98_RS01665 PF03143 Elongation factor Tu C-terminal domain GJD98_RS01670 PF00338 Ribosomal protein S10p/S20e GJD98_RS01675 PF00297 Ribosomal protein L3 GJD98_RS01680 PF00573 Ribosomal protein L4/L1 family GJD98_RS01685 PF00276 Ribosomal protein L23 GJD98_RS01690 PF03947 Ribosomal Proteins L2, C-terminal domain GJD98_RS01690 PF00181 Ribosomal Proteins L2, RNA binding domain GJD98_RS01695 PF00203 Ribosomal protein S19 GJD98_RS01700 PF00237 Ribosomal protein L22p/L17e GJD98_RS01705 PF00189 Ribosomal protein S3, C-terminal domain GJD98_RS01705 PF07650 KH domain GJD98_RS01710 PF00252 Ribosomal protein L16p/L10e GJD98_RS01715 PF00831 Ribosomal L29 protein GJD98_RS01720 PF00366 Ribosomal protein S17 GJD98_RS01725 PF00238 Ribosomal protein L14p/L23e GJD98_RS01730 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 GJD98_RS01730 PF00467 KOW motif GJD98_RS01735 PF00673 ribosomal L5P family C-terminus GJD98_RS01735 PF00281 Ribosomal protein L5 GJD98_RS01740 PF00253 Ribosomal protein S14p/S29e GJD98_RS01745 PF00410 Ribosomal protein S8 GJD98_RS01750 PF00347 Ribosomal protein L6 GJD98_RS01755 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast GJD98_RS01760 PF03719 Ribosomal protein S5, C-terminal domain GJD98_RS01760 PF00333 Ribosomal protein S5, N-terminal domain GJD98_RS01765 PF00327 Ribosomal protein L30p/L7e GJD98_RS01770 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A GJD98_RS01775 PF00344 SecY translocase GJD98_RS01780 PF00444 Ribosomal protein L36 GJD98_RS01785 PF00416 Ribosomal protein S13/S18 GJD98_RS01790 PF00411 Ribosomal protein S11 GJD98_RS01795 PF00163 Ribosomal protein S4/S9 N-terminal domain GJD98_RS01795 PF01479 S4 domain GJD98_RS01800 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain GJD98_RS01800 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain GJD98_RS01800 PF01000 RNA polymerase Rpb3/RpoA insert domain GJD98_RS01805 PF01196 Ribosomal protein L17 GJD98_RS01810 PF00436 Single-strand binding protein family GJD98_RS01815 PF07690 Major Facilitator Superfamily GJD98_RS01825 PF00550 Phosphopantetheine attachment site GJD98_RS01835 PF00109 Beta-ketoacyl synthase, N-terminal domain GJD98_RS01835 PF02801 Beta-ketoacyl synthase, C-terminal domain GJD98_RS01845 PF03279 Bacterial lipid A biosynthesis acyltransferase GJD98_RS01860 PF01678 Diaminopimelate epimerase GJD98_RS01865 PF13627 Prokaryotic lipoprotein-attachment site GJD98_RS01880 PF02230 Phospholipase/Carboxylesterase GJD98_RS01885 PF03364 Polyketide cyclase / dehydrase and lipid transport GJD98_RS01890 PF03658 RnfH family Ubiquitin GJD98_RS01895 PF04355 SmpA / OmlA family GJD98_RS01900 PF01475 Ferric uptake regulator family GJD98_RS01905 PF05230 MASE2 domain GJD98_RS01905 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS01930 PF04107 Glutamate-cysteine ligase family 2(GCS2) GJD98_RS01960 PF17760 UvrA interaction domain GJD98_RS01960 PF17755 UvrA DNA-binding domain GJD98_RS01965 PF04011 LemA family GJD98_RS01970 PF01435 Peptidase family M48 GJD98_RS01975 PF01061 ABC-2 type transporter GJD98_RS01980 PF00005 ABC transporter GJD98_RS02015 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GJD98_RS02015 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GJD98_RS02020 PF01245 Ribosomal protein L19 GJD98_RS02025 PF01746 tRNA (Guanine-1)-methyltransferase GJD98_RS02030 PF05239 PRC-barrel domain GJD98_RS02030 PF01782 RimM N-terminal domain GJD98_RS02035 PF00886 Ribosomal protein S16 GJD98_RS02040 PF00448 SRP54-type protein, GTPase domain GJD98_RS02040 PF02881 SRP54-type protein, helical bundle domain GJD98_RS02040 PF02978 Signal peptide binding domain GJD98_RS02060 PF13520 Amino acid permease GJD98_RS02070 PF02627 Carboxymuconolactone decarboxylase family GJD98_RS02100 PF02628 Cytochrome oxidase assembly protein GJD98_RS02105 PF01040 UbiA prenyltransferase family GJD98_RS02110 PF02630 SCO1/SenC GJD98_RS02115 PF18030 RimK PreATP-grasp domain GJD98_RS02115 PF08443 RimK-like ATP-grasp domain GJD98_RS02125 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain GJD98_RS02125 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain GJD98_RS02130 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase GJD98_RS02135 PF00920 Dehydratase family GJD98_RS02140 PF02685 Glucokinase GJD98_RS02145 PF01081 KDPG and KHG aldolase GJD98_RS02150 PF00083 Sugar (and other) transporter GJD98_RS02160 PF13443 Cro/C1-type HTH DNA-binding domain GJD98_RS02170 PF00762 Ferrochelatase GJD98_RS02175 PF00313 'Cold-shock' DNA-binding domain GJD98_RS02190 PF02321 Outer membrane efflux protein GJD98_RS02195 PF00529 HlyD membrane-fusion protein of T1SS GJD98_RS02195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJD98_RS02210 PF01638 HxlR-like helix-turn-helix GJD98_RS02275 PF01580 FtsK/SpoIIIE family GJD98_RS02330 PF00083 Sugar (and other) transporter GJD98_RS02345 PF01808 AICARFT/IMPCHase bienzyme GJD98_RS02345 PF02142 MGS-like domain GJD98_RS02355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GJD98_RS02355 PF02785 Biotin carboxylase C-terminal domain GJD98_RS02355 PF00289 Biotin carboxylase, N-terminal domain GJD98_RS02360 PF00364 Biotin-requiring enzyme GJD98_RS02365 PF01220 Dehydroquinase class II GJD98_RS02375 PF00364 Biotin-requiring enzyme GJD98_RS02375 PF00682 HMGL-like GJD98_RS02375 PF02436 Conserved carboxylase domain GJD98_RS02380 PF07504 Fungalysin/Thermolysin Propeptide Motif GJD98_RS02380 PF01447 Thermolysin metallopeptidase, catalytic domain GJD98_RS02380 PF02868 Thermolysin metallopeptidase, alpha-helical domain GJD98_RS02385 PF00364 Biotin-requiring enzyme GJD98_RS02385 PF00561 alpha/beta hydrolase fold GJD98_RS02390 PF03372 Endonuclease/Exonuclease/phosphatase family GJD98_RS02395 PF00274 Fructose-bisphosphate aldolase class-I GJD98_RS02400 PF00970 Oxidoreductase FAD-binding domain GJD98_RS02400 PF00111 2Fe-2S iron-sulfur cluster binding domain GJD98_RS02400 PF00175 Oxidoreductase NAD-binding domain GJD98_RS02415 PF01066 CDP-alcohol phosphatidyltransferase GJD98_RS02420 PF00381 PTS HPr component phosphorylation site GJD98_RS02425 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein GJD98_RS02430 PF00309 Sigma-54 factor, Activator interacting domain (AID) GJD98_RS02430 PF04552 Sigma-54, DNA binding domain GJD98_RS02430 PF04963 Sigma-54 factor, core binding domain GJD98_RS02435 PF00471 Ribosomal protein L33 GJD98_RS02440 PF00830 Ribosomal L28 family GJD98_RS02450 PF02390 Putative methyltransferase GJD98_RS02455 PF05343 M42 glutamyl aminopeptidase GJD98_RS02465 PF12221 Bacterial membrane protein N terminal GJD98_RS02465 PF01145 SPFH domain / Band 7 family GJD98_RS02470 PF01145 SPFH domain / Band 7 family GJD98_RS02475 PF00709 Adenylosuccinate synthetase GJD98_RS02495 PF01316 Arginine repressor, DNA binding domain GJD98_RS02495 PF02863 Arginine repressor, C-terminal domain GJD98_RS02500 PF00497 Bacterial extracellular solute-binding proteins, family 3 GJD98_RS02505 PF00528 Binding-protein-dependent transport system inner membrane component GJD98_RS02510 PF00005 ABC transporter GJD98_RS02515 PF00764 Arginosuccinate synthase GJD98_RS02520 PF00206 Lyase GJD98_RS02520 PF14698 Argininosuccinate lyase C-terminal GJD98_RS02525 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GJD98_RS02525 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GJD98_RS02540 PF13180 PDZ domain GJD98_RS02540 PF03572 Peptidase family S41 GJD98_RS02545 PF01551 Peptidase family M23 GJD98_RS02550 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GJD98_RS02550 PF01676 Metalloenzyme superfamily GJD98_RS02565 PF01255 Putative undecaprenyl diphosphate synthase GJD98_RS02575 PF02163 Peptidase family M50 GJD98_RS02575 PF17820 PDZ domain GJD98_RS02580 PF01103 Surface antigen GJD98_RS02580 PF07244 Surface antigen variable number repeat GJD98_RS02590 PF00132 Bacterial transferase hexapeptide (six repeats) GJD98_RS02590 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GJD98_RS02595 PF07977 FabA-like domain GJD98_RS02600 PF00132 Bacterial transferase hexapeptide (six repeats) GJD98_RS02600 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GJD98_RS02605 PF02537 CrcB-like protein, Camphor Resistance (CrcB) GJD98_RS02610 PF02403 Seryl-tRNA synthetase N-terminal domain GJD98_RS02610 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GJD98_RS02615 PF04229 GrpB protein GJD98_RS02635 PF00248 Aldo/keto reductase family GJD98_RS02660 PF00485 Phosphoribulokinase / Uridine kinase family GJD98_RS02695 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GJD98_RS02700 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit GJD98_RS02705 PF02910 Fumarate reductase flavoprotein C-term GJD98_RS02705 PF00890 FAD binding domain GJD98_RS02710 PF13085 2Fe-2S iron-sulfur cluster binding domain GJD98_RS02715 PF16078 2-oxoglutarate dehydrogenase N-terminus GJD98_RS02715 PF00676 Dehydrogenase E1 component GJD98_RS02715 PF16870 2-oxoglutarate dehydrogenase C-terminal GJD98_RS02715 PF02779 Transketolase, pyrimidine binding domain GJD98_RS02720 PF02817 e3 binding domain GJD98_RS02720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GJD98_RS02720 PF00364 Biotin-requiring enzyme GJD98_RS02725 PF08442 ATP-grasp domain GJD98_RS02725 PF00549 CoA-ligase GJD98_RS02730 PF00549 CoA-ligase GJD98_RS02730 PF02629 CoA binding domain GJD98_RS02735 PF01243 Pyridoxamine 5'-phosphate oxidase GJD98_RS02735 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GJD98_RS02750 PF07690 Major Facilitator Superfamily GJD98_RS02760 PF02954 Bacterial regulatory protein, Fis family GJD98_RS02765 PF14572 Phosphoribosyl synthetase-associated domain GJD98_RS02765 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GJD98_RS02785 PF03550 Outer membrane lipoprotein LolB GJD98_RS02790 PF01467 Cytidylyltransferase-like GJD98_RS02810 PF00893 Small Multidrug Resistance protein GJD98_RS02820 PF00817 impB/mucB/samB family GJD98_RS02820 PF11798 IMS family HHH motif GJD98_RS02820 PF11799 impB/mucB/samB family C-terminal domain GJD98_RS02835 PF06827 Zinc finger found in FPG and IleRS GJD98_RS02835 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain GJD98_RS02835 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain GJD98_RS02855 PF00106 short chain dehydrogenase GJD98_RS02860 PF00106 short chain dehydrogenase GJD98_RS02865 PF07879 PHB/PHA accumulation regulator DNA-binding domain GJD98_RS02865 PF05233 PHB accumulation regulatory domain GJD98_RS02880 PF07670 Nucleoside recognition GJD98_RS02885 PF07670 Nucleoside recognition GJD98_RS02890 PF01551 Peptidase family M23 GJD98_RS02890 PF04225 Opacity-associated protein A LysM-like domain GJD98_RS02895 PF00579 tRNA synthetases class I (W and Y) GJD98_RS02920 PF00132 Bacterial transferase hexapeptide (six repeats) GJD98_RS02925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GJD98_RS02925 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJD98_RS02930 PF00962 Adenosine/AMP deaminase GJD98_RS02945 PF01384 Phosphate transporter family GJD98_RS02950 PF01865 Protein of unknown function DUF47 GJD98_RS02960 PF02622 Uncharacterized ACR, COG1678 GJD98_RS02965 PF03652 Holliday junction resolvase GJD98_RS02970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain GJD98_RS02970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain GJD98_RS02980 PF13335 Magnesium chelatase, subunit ChlI C-terminal GJD98_RS02980 PF01078 Magnesium chelatase, subunit ChlI GJD98_RS02985 PF04380 Membrane fusogenic activity GJD98_RS02990 PF00543 Nitrogen regulatory protein P-II GJD98_RS02995 PF01812 5-formyltetrahydrofolate cyclo-ligase family GJD98_RS03005 PF01063 Amino-transferase class IV GJD98_RS03015 PF00501 AMP-binding enzyme GJD98_RS03015 PF01553 Acyltransferase GJD98_RS03030 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GJD98_RS03030 PF00561 alpha/beta hydrolase fold GJD98_RS03035 PF02082 Transcriptional regulator GJD98_RS03040 PF01458 Uncharacterized protein family (UPF0051) GJD98_RS03045 PF00005 ABC transporter GJD98_RS03050 PF01458 Uncharacterized protein family (UPF0051) GJD98_RS03055 PF00266 Aminotransferase class-V GJD98_RS03060 PF01592 NifU-like N terminal domain GJD98_RS03065 PF01883 Iron-sulfur cluster assembly protein GJD98_RS03070 PF00152 tRNA synthetases class II (D, K and N) GJD98_RS03075 PF01728 FtsJ-like methyltransferase GJD98_RS03075 PF18125 RlmM ferredoxin-like domain GJD98_RS03080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GJD98_RS03080 PF01411 tRNA synthetases class II (A) GJD98_RS03090 PF00571 CBS domain GJD98_RS03090 PF03471 Transporter associated domain GJD98_RS03090 PF01595 Cyclin M transmembrane N-terminal domain GJD98_RS03095 PF08240 Alcohol dehydrogenase GroES-like domain GJD98_RS03095 PF00107 Zinc-binding dehydrogenase GJD98_RS03110 PF01327 Polypeptide deformylase GJD98_RS03120 PF04107 Glutamate-cysteine ligase family 2(GCS2) GJD98_RS03130 PF14489 QueF-like protein GJD98_RS03130 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term GJD98_RS03140 PF00958 GMP synthase C terminal domain GJD98_RS03140 PF00117 Glutamine amidotransferase class-I GJD98_RS03140 PF13302 Acetyltransferase (GNAT) domain GJD98_RS03140 PF13673 Acetyltransferase (GNAT) domain GJD98_RS03140 PF03352 Methyladenine glycosylase GJD98_RS03175 PF00753 Metallo-beta-lactamase superfamily GJD98_RS03175 PF03772 Competence protein GJD98_RS03180 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor GJD98_RS03180 PF07963 Prokaryotic N-terminal methylation motif GJD98_RS03185 PF05567 Neisseria PilC beta-propeller domain GJD98_RS03220 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase GJD98_RS03225 PF00265 Thymidine kinase GJD98_RS03230 PF07690 Major Facilitator Superfamily GJD98_RS03240 PF01676 Metalloenzyme superfamily GJD98_RS03245 PF00227 Proteasome subunit GJD98_RS03250 PF00004 ATPase family associated with various cellular activities (AAA) GJD98_RS03250 PF07724 AAA domain (Cdc48 subfamily) GJD98_RS03260 PF03631 Virulence factor BrkB GJD98_RS03270 PF03358 NADPH-dependent FMN reductase GJD98_RS03275 PF04480 Protein of unknown function (DUF559) GJD98_RS03280 PF03372 Endonuclease/Exonuclease/phosphatase family GJD98_RS03285 PF03372 Endonuclease/Exonuclease/phosphatase family GJD98_RS03290 PF01197 Ribosomal protein L31 GJD98_RS03295 PF00390 Malic enzyme, N-terminal domain GJD98_RS03295 PF03949 Malic enzyme, NAD binding domain GJD98_RS03310 PF02086 D12 class N6 adenine-specific DNA methyltransferase GJD98_RS03315 PF03222 Tryptophan/tyrosine permease family GJD98_RS03320 PF03222 Tryptophan/tyrosine permease family GJD98_RS03325 PF04355 SmpA / OmlA family GJD98_RS03325 PF00691 OmpA family GJD98_RS03335 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJD98_RS03340 PF00005 ABC transporter GJD98_RS03355 PF02321 Outer membrane efflux protein GJD98_RS03360 PF14718 Soluble lytic murein transglycosylase L domain GJD98_RS03360 PF01464 Transglycosylase SLT domain GJD98_RS03365 PF00834 Ribulose-phosphate 3 epimerase family GJD98_RS03380 PF05114 Protein of unknown function (DUF692) GJD98_RS03395 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJD98_RS03400 PF06314 Acetoacetate decarboxylase (ADC) GJD98_RS03410 PF00072 Response regulator receiver domain GJD98_RS03410 PF00211 Adenylate and Guanylate cyclase catalytic domain GJD98_RS03420 PF05114 Protein of unknown function (DUF692) GJD98_RS03435 PF03710 Glutamate-ammonia ligase adenylyltransferase GJD98_RS03435 PF08335 GlnD PII-uridylyltransferase GJD98_RS03450 PF00005 ABC transporter GJD98_RS03460 PF00919 Uncharacterized protein family UPF0004 GJD98_RS03460 PF18693 TRAM domain GJD98_RS03460 PF04055 Radical SAM superfamily GJD98_RS03465 PF02683 Cytochrome C biogenesis protein transmembrane region GJD98_RS03465 PF11412 Disulphide bond corrector protein DsbC GJD98_RS03470 PF00166 Chaperonin 10 Kd subunit GJD98_RS03475 PF00118 TCP-1/cpn60 chaperonin family GJD98_RS03480 PF00210 Ferritin-like domain GJD98_RS03495 PF00204 DNA gyrase B GJD98_RS03495 PF00986 DNA gyrase B subunit, carboxyl terminus GJD98_RS03495 PF01751 Toprim domain GJD98_RS03495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS03500 PF00005 ABC transporter GJD98_RS03500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region GJD98_RS03510 PF04073 Aminoacyl-tRNA editing domain GJD98_RS03510 PF03129 Anticodon binding domain GJD98_RS03510 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GJD98_RS03515 PF12796 Ankyrin repeats (3 copies) GJD98_RS03515 PF02661 Fic/DOC family GJD98_RS03525 PF00916 Sulfate permease family GJD98_RS03525 PF01740 STAS domain GJD98_RS03530 PF01171 PP-loop family GJD98_RS03535 PF02321 Outer membrane efflux protein GJD98_RS03545 PF00155 Aminotransferase class I and II GJD98_RS03550 PF08240 Alcohol dehydrogenase GroES-like domain GJD98_RS03550 PF00107 Zinc-binding dehydrogenase GJD98_RS03555 PF00005 ABC transporter GJD98_RS03555 PF12848 ABC transporter GJD98_RS03565 PF04143 Sulphur transport GJD98_RS03585 PF00491 Arginase family GJD98_RS03595 PF01979 Amidohydrolase family GJD98_RS03605 PF03169 OPT oligopeptide transporter protein GJD98_RS03610 PF00512 His Kinase A (phospho-acceptor) domain GJD98_RS03610 PF00672 HAMP domain GJD98_RS03610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS03615 PF00486 Transcriptional regulatory protein, C terminal GJD98_RS03615 PF00072 Response regulator receiver domain GJD98_RS03630 PF00375 Sodium:dicarboxylate symporter family GJD98_RS03635 PF00133 tRNA synthetases class I (I, L, M and V) GJD98_RS03635 PF10458 Valyl tRNA synthetase tRNA binding arm GJD98_RS03635 PF08264 Anticodon-binding domain of tRNA GJD98_RS03640 PF00873 AcrB/AcrD/AcrF family GJD98_RS03645 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJD98_RS03665 PF00464 Serine hydroxymethyltransferase GJD98_RS03670 PF03477 ATP cone domain GJD98_RS03675 PF01029 NusB family GJD98_RS03680 PF02769 AIR synthase related protein, C-terminal domain GJD98_RS03680 PF00586 AIR synthase related protein, N-terminal domain GJD98_RS03685 PF04608 Phosphatidylglycerophosphatase A GJD98_RS03690 PF01594 AI-2E family transporter GJD98_RS03710 PF00795 Carbon-nitrogen hydrolase GJD98_RS03710 PF02540 NAD synthase GJD98_RS03715 PF12419 SNF2 Helicase protein GJD98_RS03715 PF00271 Helicase conserved C-terminal domain GJD98_RS03715 PF00176 SNF2 family N-terminal domain GJD98_RS03725 PF00772 DnaB-like helicase N terminal domain GJD98_RS03725 PF03796 DnaB-like helicase C terminal domain GJD98_RS03730 PF00842 Alanine racemase, C-terminal domain GJD98_RS03730 PF01168 Alanine racemase, N-terminal domain GJD98_RS03755 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS03760 PF04055 Radical SAM superfamily GJD98_RS03765 PF01541 GIY-YIG catalytic domain GJD98_RS03785 PF00977 Histidine biosynthesis protein GJD98_RS03790 PF00117 Glutamine amidotransferase class-I GJD98_RS03795 PF02348 Cytidylyltransferase GJD98_RS03800 PF08666 SAF domain GJD98_RS03800 PF03102 NeuB family GJD98_RS03805 PF02350 UDP-N-acetylglucosamine 2-epimerase GJD98_RS03815 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GJD98_RS03820 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase GJD98_RS03825 PF04321 RmlD substrate binding domain GJD98_RS03830 PF16363 GDP-mannose 4,6 dehydratase GJD98_RS03835 PF00342 Phosphoglucose isomerase GJD98_RS03840 PF00483 Nucleotidyl transferase GJD98_RS03845 PF01370 NAD dependent epimerase/dehydratase family GJD98_RS03850 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GJD98_RS03850 PF00953 Glycosyl transferase family 4 GJD98_RS03910 PF14524 Wzt C-terminal domain GJD98_RS03910 PF00005 ABC transporter GJD98_RS03940 PF00753 Metallo-beta-lactamase superfamily GJD98_RS03940 PF16123 Hydroxyacylglutathione hydrolase C-terminus GJD98_RS03945 PF02599 Global regulator protein family GJD98_RS03950 PF01757 Acyltransferase family GJD98_RS03955 PF08279 HTH domain GJD98_RS03955 PF03099 Biotin/lipoate A/B protein ligase family GJD98_RS03955 PF02237 Biotin protein ligase C terminal domain GJD98_RS03960 PF01648 4'-phosphopantetheinyl transferase superfamily GJD98_RS03965 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit GJD98_RS03970 PF11734 TilS substrate C-terminal domain GJD98_RS03970 PF09179 TilS substrate binding domain GJD98_RS03970 PF01171 PP-loop family GJD98_RS03985 PF03062 MBOAT, membrane-bound O-acyltransferase family GJD98_RS03990 PF03313 Serine dehydratase alpha chain GJD98_RS03990 PF03315 Serine dehydratase beta chain GJD98_RS03995 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase GJD98_RS03995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GJD98_RS04000 PF07690 Major Facilitator Superfamily GJD98_RS04025 PF02445 Quinolinate synthetase A protein GJD98_RS04030 PF00890 FAD binding domain GJD98_RS04030 PF02910 Fumarate reductase flavoprotein C-term GJD98_RS04035 PF00206 Lyase GJD98_RS04035 PF08328 Adenylosuccinate lyase C-terminal GJD98_RS04040 PF00916 Sulfate permease family GJD98_RS04040 PF01740 STAS domain GJD98_RS04045 PF18158 Adaptive response protein AidB N-terminal domain GJD98_RS04045 PF02770 Acyl-CoA dehydrogenase, middle domain GJD98_RS04045 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJD98_RS04055 PF02896 PEP-utilising enzyme, TIM barrel domain GJD98_RS04055 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GJD98_RS04055 PF00391 PEP-utilising enzyme, mobile domain GJD98_RS04060 PF00999 Sodium/hydrogen exchanger family GJD98_RS04065 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain GJD98_RS04065 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain GJD98_RS04070 PF04101 Glycosyltransferase family 28 C-terminal domain GJD98_RS04070 PF03033 Glycosyltransferase family 28 N-terminal domain GJD98_RS04075 PF01546 Peptidase family M20/M25/M40 GJD98_RS04075 PF07687 Peptidase dimerisation domain GJD98_RS04090 PF04085 rod shape-determining protein MreC GJD98_RS04095 PF04093 rod shape-determining protein MreD GJD98_RS04100 PF00849 RNA pseudouridylate synthase GJD98_RS04110 PF00180 Isocitrate/isopropylmalate dehydrogenase GJD98_RS04115 PF02617 ATP-dependent Clp protease adaptor protein ClpS GJD98_RS04120 PF10431 C-terminal, D2-small domain, of ClpB protein GJD98_RS04120 PF00004 ATPase family associated with various cellular activities (AAA) GJD98_RS04120 PF02861 Clp amino terminal domain, pathogenicity island component GJD98_RS04120 PF07724 AAA domain (Cdc48 subfamily) GJD98_RS04120 PF17871 AAA lid domain GJD98_RS04130 PF01541 GIY-YIG catalytic domain GJD98_RS04135 PF00535 Glycosyl transferase family 2 GJD98_RS04150 PF01694 Rhomboid family GJD98_RS04155 PF01551 Peptidase family M23 GJD98_RS04155 PF04225 Opacity-associated protein A LysM-like domain GJD98_RS04160 PF13742 OB-fold nucleic acid binding domain GJD98_RS04160 PF02601 Exonuclease VII, large subunit GJD98_RS04190 PF00106 short chain dehydrogenase GJD98_RS04205 PF00218 Indole-3-glycerol phosphate synthase GJD98_RS04210 PF02885 Glycosyl transferase family, helical bundle domain GJD98_RS04210 PF00591 Glycosyl transferase family, a/b domain GJD98_RS04215 PF00117 Glutamine amidotransferase class-I GJD98_RS04220 PF00005 ABC transporter GJD98_RS04220 PF12399 Branched-chain amino acid ATP-binding cassette transporter GJD98_RS04240 PF01380 SIS domain GJD98_RS04240 PF00571 CBS domain GJD98_RS04245 PF00005 ABC transporter GJD98_RS04250 PF02405 Permease MlaE GJD98_RS04255 PF02470 MlaD protein GJD98_RS04270 PF01722 BolA-like protein GJD98_RS04275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GJD98_RS04280 PF01784 NIF3 (NGG1p interacting factor 3) GJD98_RS04285 PF00005 ABC transporter GJD98_RS04290 PF02687 FtsX-like permease family GJD98_RS04290 PF12704 MacB-like periplasmic core domain GJD98_RS04295 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJD98_RS04305 PF00158 Sigma-54 interaction domain GJD98_RS04305 PF06490 Flagellar regulatory protein FleQ GJD98_RS04305 PF02954 Bacterial regulatory protein, Fis family GJD98_RS04315 PF01343 Peptidase family S49 GJD98_RS04315 PF08496 Peptidase family S49 N-terminal GJD98_RS04320 PF00005 ABC transporter GJD98_RS04325 PF03379 CcmB protein GJD98_RS04330 PF01578 Cytochrome C assembly protein GJD98_RS04340 PF03100 CcmE GJD98_RS04345 PF01578 Cytochrome C assembly protein GJD98_RS04345 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal GJD98_RS04350 PF08534 Redoxin GJD98_RS04355 PF03918 Cytochrome C biogenesis protein GJD98_RS04365 PF07311 Dodecin GJD98_RS04375 PF02245 Methylpurine-DNA glycosylase (MPG) GJD98_RS04380 PF00270 DEAD/DEAH box helicase GJD98_RS04380 PF00271 Helicase conserved C-terminal domain GJD98_RS04380 PF00570 HRDC domain GJD98_RS04380 PF16124 RecQ zinc-binding GJD98_RS04380 PF09382 RQC domain GJD98_RS04385 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJD98_RS04385 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJD98_RS04385 PF02770 Acyl-CoA dehydrogenase, middle domain GJD98_RS04390 PF00378 Enoyl-CoA hydratase/isomerase GJD98_RS04395 PF00378 Enoyl-CoA hydratase/isomerase GJD98_RS04405 PF16658 Class II release factor RF3, C-terminal domain GJD98_RS04405 PF03144 Elongation factor Tu domain 2 GJD98_RS04405 PF00009 Elongation factor Tu GTP binding domain GJD98_RS04415 PF02233 NAD(P) transhydrogenase beta subunit GJD98_RS04420 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch GJD98_RS04425 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GJD98_RS04425 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GJD98_RS04430 PF00188 Cysteine-rich secretory protein family GJD98_RS04440 PF05230 MASE2 domain GJD98_RS04440 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS04465 PF00933 Glycosyl hydrolase family 3 N terminal domain GJD98_RS04465 PF01915 Glycosyl hydrolase family 3 C-terminal domain GJD98_RS04470 PF00375 Sodium:dicarboxylate symporter family GJD98_RS04475 PF07687 Peptidase dimerisation domain GJD98_RS04475 PF01546 Peptidase family M20/M25/M40 GJD98_RS04480 PF00132 Bacterial transferase hexapeptide (six repeats) GJD98_RS04480 PF14602 Hexapeptide repeat of succinyl-transferase GJD98_RS04480 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GJD98_RS04485 PF01553 Acyltransferase GJD98_RS04490 PF01053 Cys/Met metabolism PLP-dependent enzyme GJD98_RS04495 PF00563 EAL domain GJD98_RS04495 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS04495 PF03707 Bacterial signalling protein N terminal repeat GJD98_RS04500 PF01494 FAD binding domain GJD98_RS04525 PF01699 Sodium/calcium exchanger protein GJD98_RS04535 PF10576 Iron-sulfur binding domain of endonuclease III GJD98_RS04535 PF00633 Helix-hairpin-helix motif GJD98_RS04535 PF00730 HhH-GPD superfamily base excision DNA repair protein GJD98_RS04535 PF14815 NUDIX domain GJD98_RS04565 PF13180 PDZ domain GJD98_RS04575 PF00106 short chain dehydrogenase GJD98_RS04590 PF13144 Chaperone for flagella basal body P-ring formation GJD98_RS04605 PF03309 Type III pantothenate kinase GJD98_RS04615 PF02381 MraZ protein, putative antitoxin-like GJD98_RS04620 PF01795 MraW methylase family GJD98_RS04630 PF00905 Penicillin binding protein transpeptidase domain GJD98_RS04630 PF03717 Penicillin-binding Protein dimerisation domain GJD98_RS04635 PF02875 Mur ligase family, glutamate ligase domain GJD98_RS04635 PF08245 Mur ligase middle domain GJD98_RS04635 PF01225 Mur ligase family, catalytic domain GJD98_RS04640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GJD98_RS04640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GJD98_RS04645 PF02163 Peptidase family M50 GJD98_RS04660 PF01012 Electron transfer flavoprotein domain GJD98_RS04665 PF01012 Electron transfer flavoprotein domain GJD98_RS04665 PF00766 Electron transfer flavoprotein FAD-binding domain GJD98_RS04670 PF05222 Alanine dehydrogenase/PNT, N-terminal domain GJD98_RS04670 PF01262 Alanine dehydrogenase/PNT, C-terminal domain GJD98_RS04675 PF00912 Transglycosylase GJD98_RS04675 PF00905 Penicillin binding protein transpeptidase domain GJD98_RS04675 PF17092 Penicillin-binding protein OB-like domain GJD98_RS04685 PF11104 Type IV pilus assembly protein PilM; GJD98_RS04695 PF04350 Pilus assembly protein, PilO GJD98_RS04700 PF04351 Pilus assembly protein, PilP GJD98_RS04705 PF07660 Secretin and TonB N terminus short domain GJD98_RS04705 PF11741 AMIN domain GJD98_RS04705 PF00263 Bacterial type II and III secretion system protein GJD98_RS04705 PF03958 Bacterial type II/III secretion system short domain GJD98_RS04710 PF01202 Shikimate kinase GJD98_RS04715 PF01761 3-dehydroquinate synthase GJD98_RS04725 PF00582 Universal stress protein family GJD98_RS04730 PF01687 Riboflavin kinase GJD98_RS04730 PF06574 FAD synthetase GJD98_RS04735 PF06827 Zinc finger found in FPG and IleRS GJD98_RS04735 PF08264 Anticodon-binding domain of tRNA GJD98_RS04735 PF00133 tRNA synthetases class I (I, L, M and V) GJD98_RS04740 PF01252 Signal peptidase (SPase) II GJD98_RS04745 PF01081 KDPG and KHG aldolase GJD98_RS04760 PF07650 KH domain GJD98_RS04760 PF01926 50S ribosome-binding GTPase GJD98_RS04765 PF02565 Recombination protein O C terminal GJD98_RS04765 PF11967 Recombination protein O N terminal GJD98_RS04780 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ GJD98_RS04785 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II GJD98_RS04785 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase GJD98_RS04785 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg GJD98_RS04790 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GJD98_RS04795 PF01027 Inhibitor of apoptosis-promoting Bax1 GJD98_RS04800 PF00795 Carbon-nitrogen hydrolase GJD98_RS04805 PF01523 Putative modulator of DNA gyrase GJD98_RS04810 PF01734 Patatin-like phospholipase GJD98_RS04815 PF00501 AMP-binding enzyme GJD98_RS04820 PF00270 DEAD/DEAH box helicase GJD98_RS04820 PF00271 Helicase conserved C-terminal domain GJD98_RS04820 PF03461 TRCF domain GJD98_RS04820 PF17757 UvrB interaction domain GJD98_RS04820 PF02559 CarD-like/TRCF domain GJD98_RS04825 PF02646 RmuC family GJD98_RS04840 PF00533 BRCA1 C Terminus (BRCT) domain GJD98_RS04840 PF01653 NAD-dependent DNA ligase adenylation domain GJD98_RS04840 PF03119 NAD-dependent DNA ligase C4 zinc finger domain GJD98_RS04840 PF12826 Helix-hairpin-helix motif GJD98_RS04840 PF03120 NAD-dependent DNA ligase OB-fold domain GJD98_RS04850 PF00528 Binding-protein-dependent transport system inner membrane component GJD98_RS04855 PF00528 Binding-protein-dependent transport system inner membrane component GJD98_RS04855 PF12911 N-terminal TM domain of oligopeptide transport permease C GJD98_RS04860 PF07733 Bacterial DNA polymerase III alpha NTPase domain GJD98_RS04860 PF17657 Bacterial DNA polymerase III alpha subunit finger domain GJD98_RS04860 PF14579 Helix-hairpin-helix motif GJD98_RS04860 PF02811 PHP domain GJD98_RS04860 PF01336 OB-fold nucleic acid binding domain GJD98_RS04870 PF01040 UbiA prenyltransferase family GJD98_RS04880 PF02719 Polysaccharide biosynthesis protein GJD98_RS04900 PF00324 Amino acid permease GJD98_RS04920 PF01610 Transposase GJD98_RS04920 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 GJD98_RS04920 PF13542 Helix-turn-helix domain of transposase family ISL3 GJD98_RS04935 PF02586 SOS response associated peptidase (SRAP) GJD98_RS04940 PF00717 Peptidase S24-like GJD98_RS04945 PF13438 Domain of unknown function (DUF4113) GJD98_RS04945 PF00817 impB/mucB/samB family GJD98_RS04945 PF11799 impB/mucB/samB family C-terminal domain GJD98_RS04965 PF00436 Single-strand binding protein family GJD98_RS05120 PF02599 Global regulator protein family GJD98_RS05155 PF00873 AcrB/AcrD/AcrF family GJD98_RS05160 PF00403 Heavy-metal-associated domain GJD98_RS05165 PF00403 Heavy-metal-associated domain GJD98_RS05185 PF00106 short chain dehydrogenase GJD98_RS05205 PF00690 Cation transporter/ATPase, N-terminus GJD98_RS05205 PF00689 Cation transporting ATPase, C-terminus GJD98_RS05215 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJD98_RS05220 PF00873 AcrB/AcrD/AcrF family GJD98_RS05225 PF10996 Beta-Casp domain GJD98_RS05225 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GJD98_RS05225 PF00753 Metallo-beta-lactamase superfamily GJD98_RS05230 PF00591 Glycosyl transferase family, a/b domain GJD98_RS05230 PF02885 Glycosyl transferase family, helical bundle domain GJD98_RS05230 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GJD98_RS05235 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GJD98_RS05235 PF14572 Phosphoribosyl synthetase-associated domain GJD98_RS05245 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS05245 PF00563 EAL domain GJD98_RS05245 PF13426 PAS domain GJD98_RS05245 PF08447 PAS fold GJD98_RS05245 PF05231 MASE1 GJD98_RS05245 PF08448 PAS fold GJD98_RS05260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJD98_RS05265 PF00873 AcrB/AcrD/AcrF family GJD98_RS05280 PF11339 Protein of unknown function (DUF3141) GJD98_RS05295 PF07732 Multicopper oxidase GJD98_RS05295 PF00394 Multicopper oxidase GJD98_RS05295 PF07731 Multicopper oxidase GJD98_RS05340 PF00970 Oxidoreductase FAD-binding domain GJD98_RS05340 PF00175 Oxidoreductase NAD-binding domain GJD98_RS05340 PF00111 2Fe-2S iron-sulfur cluster binding domain GJD98_RS05360 PF00306 ATP synthase alpha/beta chain, C terminal domain GJD98_RS05360 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GJD98_RS05365 PF00213 ATP synthase delta (OSCP) subunit GJD98_RS05365 PF00430 ATP synthase B/B' CF(0) GJD98_RS05370 PF00137 ATP synthase subunit C GJD98_RS05375 PF00119 ATP synthase A chain GJD98_RS05390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GJD98_RS05390 PF02874 ATP synthase alpha/beta family, beta-barrel domain GJD98_RS05410 PF00563 EAL domain GJD98_RS05410 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS05410 PF03707 Bacterial signalling protein N terminal repeat GJD98_RS05415 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GJD98_RS05415 PF00561 alpha/beta hydrolase fold GJD98_RS05420 PF00106 short chain dehydrogenase GJD98_RS05425 PF00313 'Cold-shock' DNA-binding domain GJD98_RS05440 PF07690 Major Facilitator Superfamily GJD98_RS05445 PF01327 Polypeptide deformylase GJD98_RS05475 PF00589 Phage integrase family GJD98_RS05475 PF13356 Arm DNA-binding domain GJD98_RS05515 PF13286 Phosphohydrolase-associated domain GJD98_RS05515 PF01966 HD domain GJD98_RS05520 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GJD98_RS05520 PF01348 Type II intron maturase GJD98_RS05535 PF17761 DUF1016 N-terminal domain GJD98_RS05535 PF06250 YhcG PDDEXK nuclease domain GJD98_RS05540 PF13356 Arm DNA-binding domain GJD98_RS05540 PF00589 Phage integrase family GJD98_RS05545 PF01609 Transposase DDE domain GJD98_RS05545 PF02281 Transposase Tn5 dimerisation domain GJD98_RS05545 PF14706 Transposase DNA-binding GJD98_RS05550 PF03023 Lipid II flippase MurJ GJD98_RS05555 PF04229 GrpB protein GJD98_RS05580 PF13419 Haloacid dehalogenase-like hydrolase GJD98_RS05585 PF00689 Cation transporting ATPase, C-terminus GJD98_RS05585 PF00690 Cation transporter/ATPase, N-terminus GJD98_RS05595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJD98_RS05600 PF00873 AcrB/AcrD/AcrF family GJD98_RS05610 PF00561 alpha/beta hydrolase fold GJD98_RS05610 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GJD98_RS05650 PF01625 Peptide methionine sulfoxide reductase GJD98_RS05650 PF01641 SelR domain GJD98_RS05700 PF03707 Bacterial signalling protein N terminal repeat GJD98_RS05700 PF00563 EAL domain GJD98_RS05700 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS05705 PF07689 KaiB domain GJD98_RS05710 PF06745 KaiC GJD98_RS05715 PF00704 Glycosyl hydrolases family 18 GJD98_RS05725 PF00144 Beta-lactamase GJD98_RS05745 PF01464 Transglycosylase SLT domain GJD98_RS05745 PF01476 LysM domain GJD98_RS05760 PF00497 Bacterial extracellular solute-binding proteins, family 3 GJD98_RS05770 PF13193 AMP-binding enzyme C-terminal domain GJD98_RS05770 PF00501 AMP-binding enzyme GJD98_RS05775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GJD98_RS05785 PF00211 Adenylate and Guanylate cyclase catalytic domain GJD98_RS05810 PF03060 Nitronate monooxygenase GJD98_RS05835 PF13416 Bacterial extracellular solute-binding protein GJD98_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component GJD98_RS05845 PF00528 Binding-protein-dependent transport system inner membrane component GJD98_RS05850 PF00005 ABC transporter GJD98_RS05850 PF08402 TOBE domain GJD98_RS05875 PF02074 Carboxypeptidase Taq (M32) metallopeptidase GJD98_RS05895 PF12833 Helix-turn-helix domain GJD98_RS05895 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain GJD98_RS05895 PF02805 Metal binding domain of Ada GJD98_RS05895 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain GJD98_RS05910 PF01593 Flavin containing amine oxidoreductase GJD98_RS05920 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GJD98_RS05920 PF00205 Thiamine pyrophosphate enzyme, central domain GJD98_RS05920 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GJD98_RS05940 PF00892 EamA-like transporter family GJD98_RS05950 PF00156 Phosphoribosyl transferase domain GJD98_RS05950 PF05139 Erythromycin esterase GJD98_RS05960 PF07690 Major Facilitator Superfamily GJD98_RS05965 PF07687 Peptidase dimerisation domain GJD98_RS05965 PF01546 Peptidase family M20/M25/M40 GJD98_RS05970 PF00485 Phosphoribulokinase / Uridine kinase family GJD98_RS05980 PF04461 Protein of unknown function (DUF520) GJD98_RS05985 PF03707 Bacterial signalling protein N terminal repeat GJD98_RS05985 PF00563 EAL domain GJD98_RS05985 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS05990 PF01875 Memo-like protein GJD98_RS06010 PF00512 His Kinase A (phospho-acceptor) domain GJD98_RS06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS06015 PF00072 Response regulator receiver domain GJD98_RS06015 PF00158 Sigma-54 interaction domain GJD98_RS06015 PF02954 Bacterial regulatory protein, Fis family GJD98_RS06030 PF01435 Peptidase family M48 GJD98_RS06035 PF01872 RibD C-terminal domain GJD98_RS06035 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GJD98_RS06040 PF00677 Lumazine binding domain GJD98_RS06045 PF00925 GTP cyclohydrolase II GJD98_RS06045 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase GJD98_RS06050 PF00885 6,7-dimethyl-8-ribityllumazine synthase GJD98_RS06055 PF06418 CTP synthase N-terminus GJD98_RS06055 PF00117 Glutamine amidotransferase class-I GJD98_RS06060 PF00793 DAHP synthetase I family GJD98_RS06080 PF13525 Outer membrane lipoprotein GJD98_RS06085 PF04381 Putative exonuclease, RdgC GJD98_RS06090 PF02705 K+ potassium transporter GJD98_RS06100 PF17785 PUA-like domain GJD98_RS06100 PF10672 S-adenosylmethionine-dependent methyltransferase GJD98_RS06105 PF00933 Glycosyl hydrolase family 3 N terminal domain GJD98_RS06105 PF01915 Glycosyl hydrolase family 3 C-terminal domain GJD98_RS06110 PF01965 DJ-1/PfpI family GJD98_RS06115 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase GJD98_RS06115 PF01502 Phosphoribosyl-AMP cyclohydrolase GJD98_RS06120 PF00977 Histidine biosynthesis protein GJD98_RS06125 PF00977 Histidine biosynthesis protein GJD98_RS06130 PF00117 Glutamine amidotransferase class-I GJD98_RS06135 PF00475 Imidazoleglycerol-phosphate dehydratase GJD98_RS06140 PF00155 Aminotransferase class I and II GJD98_RS06145 PF00815 Histidinol dehydrogenase GJD98_RS06150 PF08029 HisG, C-terminal domain GJD98_RS06150 PF01634 ATP phosphoribosyltransferase GJD98_RS06160 PF01654 Cytochrome bd terminal oxidase subunit I GJD98_RS06165 PF02322 Cytochrome bd terminal oxidase subunit II GJD98_RS06180 PF00313 'Cold-shock' DNA-binding domain GJD98_RS06190 PF03129 Anticodon binding domain GJD98_RS06190 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GJD98_RS06190 PF04073 Aminoacyl-tRNA editing domain GJD98_RS06195 PF01047 MarR family GJD98_RS06200 PF02567 Phenazine biosynthesis-like protein GJD98_RS06210 PF01810 LysE type translocator GJD98_RS06230 PF01218 Coproporphyrinogen III oxidase GJD98_RS06235 PF00460 Flagella basal body rod protein GJD98_RS06240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GJD98_RS06240 PF00460 Flagella basal body rod protein GJD98_RS06245 PF03963 Flagellar hook capping protein - N-terminal region GJD98_RS06250 PF00460 Flagella basal body rod protein GJD98_RS06250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GJD98_RS06250 PF07559 Flagellar basal body protein FlaE GJD98_RS06255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GJD98_RS06255 PF00460 Flagella basal body rod protein GJD98_RS06260 PF00460 Flagella basal body rod protein GJD98_RS06260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GJD98_RS06265 PF02107 Flagellar L-ring protein GJD98_RS06270 PF02119 Flagellar P-ring protein GJD98_RS06275 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase GJD98_RS06275 PF10135 Rod binding protein GJD98_RS06280 PF07196 Flagellin hook IN motif GJD98_RS06280 PF06429 Flagellar basal body rod FlgEFG protein C-terminal GJD98_RS06285 PF00669 Bacterial flagellin N-terminal helical region GJD98_RS06320 PF00664 ABC transporter transmembrane region GJD98_RS06320 PF00005 ABC transporter GJD98_RS06335 PF00390 Malic enzyme, N-terminal domain GJD98_RS06335 PF03949 Malic enzyme, NAD binding domain GJD98_RS06345 PF01975 Survival protein SurE GJD98_RS06350 PF01551 Peptidase family M23 GJD98_RS06350 PF01476 LysM domain GJD98_RS06355 PF00140 Sigma-70 factor, region 1.2 GJD98_RS06355 PF04542 Sigma-70 region 2 GJD98_RS06355 PF04539 Sigma-70 region 3 GJD98_RS06355 PF04545 Sigma-70, region 4 GJD98_RS06360 PF04209 homogentisate 1,2-dioxygenase GJD98_RS06365 PF01709 Transcriptional regulator GJD98_RS06370 PF02075 Crossover junction endodeoxyribonuclease RuvC GJD98_RS06375 PF07499 RuvA, C-terminal domain GJD98_RS06375 PF01330 RuvA N terminal domain GJD98_RS06390 PF08521 Two-component sensor kinase N-terminal GJD98_RS06390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS06390 PF00512 His Kinase A (phospho-acceptor) domain GJD98_RS06395 PF00072 Response regulator receiver domain GJD98_RS06395 PF00486 Transcriptional regulatory protein, C terminal GJD98_RS06400 PF04279 Intracellular septation protein A GJD98_RS06405 PF01476 LysM domain GJD98_RS06405 PF01464 Transglycosylase SLT domain GJD98_RS06410 PF16123 Hydroxyacylglutathione hydrolase C-terminus GJD98_RS06410 PF00753 Metallo-beta-lactamase superfamily GJD98_RS06415 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ GJD98_RS06425 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GJD98_RS06425 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GJD98_RS06445 PF01370 NAD dependent epimerase/dehydratase family GJD98_RS06445 PF08338 Domain of unknown function (DUF1731) GJD98_RS06450 PF01416 tRNA pseudouridine synthase GJD98_RS06455 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase GJD98_RS06460 PF00291 Pyridoxal-phosphate dependent enzyme GJD98_RS06465 PF00290 Tryptophan synthase alpha chain GJD98_RS06470 PF00749 tRNA synthetases class I (E and Q), catalytic domain GJD98_RS06470 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain GJD98_RS06475 PF09190 DALR domain GJD98_RS06475 PF01406 tRNA synthetases class I (C) catalytic domain GJD98_RS06480 PF01676 Metalloenzyme superfamily GJD98_RS06480 PF06415 BPG-independent PGAM N-terminus (iPGM_N) GJD98_RS06515 PF01609 Transposase DDE domain GJD98_RS06535 PF00437 Type II/IV secretion system protein GJD98_RS06540 PF00263 Bacterial type II and III secretion system protein GJD98_RS06540 PF03958 Bacterial type II/III secretion system short domain GJD98_RS06545 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GJD98_RS06545 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GJD98_RS06550 PF00211 Adenylate and Guanylate cyclase catalytic domain GJD98_RS06550 PF00672 HAMP domain GJD98_RS06550 PF02743 Cache domain GJD98_RS06555 PF07690 Major Facilitator Superfamily GJD98_RS06560 PF07690 Major Facilitator Superfamily GJD98_RS06560 PF00083 Sugar (and other) transporter GJD98_RS06565 PF06276 Ferric iron reductase FhuF-like transporter GJD98_RS06565 PF04183 IucA / IucC family GJD98_RS06595 PF00595 PDZ domain GJD98_RS06600 PF02578 Multi-copper polyphenol oxidoreductase laccase GJD98_RS06605 PF00849 RNA pseudouridylate synthase GJD98_RS06605 PF01479 S4 domain GJD98_RS06610 PF01938 TRAM domain GJD98_RS06610 PF00919 Uncharacterized protein family UPF0004 GJD98_RS06610 PF04055 Radical SAM superfamily GJD98_RS06625 PF02561 Flagellar protein FliS GJD98_RS06630 PF02465 Flagellar hook-associated protein 2 N-terminus GJD98_RS06630 PF07195 Flagellar hook-associated protein 2 C-terminus GJD98_RS06630 PF07196 Flagellin hook IN motif GJD98_RS06640 PF00669 Bacterial flagellin N-terminal helical region GJD98_RS06640 PF00700 Bacterial flagellin C-terminal helical region GJD98_RS06645 PF01039 Carboxyl transferase domain GJD98_RS06645 PF17848 Acetyl-coA carboxylase zinc finger domain GJD98_RS06650 PF02875 Mur ligase family, glutamate ligase domain GJD98_RS06650 PF08245 Mur ligase middle domain GJD98_RS06660 PF02674 Colicin V production protein GJD98_RS06665 PF01467 Cytidylyltransferase-like GJD98_RS06680 PF08264 Anticodon-binding domain of tRNA GJD98_RS06680 PF09334 tRNA synthetases class I (M) GJD98_RS06680 PF13603 Leucyl-tRNA synthetase, Domain 2 GJD98_RS06680 PF00133 tRNA synthetases class I (I, L, M and V) GJD98_RS06685 PF00795 Carbon-nitrogen hydrolase GJD98_RS06695 PF00171 Aldehyde dehydrogenase family GJD98_RS06700 PF00378 Enoyl-CoA hydratase/isomerase GJD98_RS06700 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GJD98_RS06700 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GJD98_RS06705 PF00108 Thiolase, N-terminal domain GJD98_RS06705 PF02803 Thiolase, C-terminal domain GJD98_RS06725 PF03707 Bacterial signalling protein N terminal repeat GJD98_RS06725 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS06725 PF00563 EAL domain GJD98_RS06730 PF03934 Type II secretion system (T2SS), protein K GJD98_RS06735 PF07963 Prokaryotic N-terminal methylation motif GJD98_RS06735 PF11612 Type II secretion system (T2SS), protein J GJD98_RS06740 PF07963 Prokaryotic N-terminal methylation motif GJD98_RS06740 PF02501 Type II secretion system (T2SS), protein I GJD98_RS06745 PF12019 Type II transport protein GspH GJD98_RS06745 PF07963 Prokaryotic N-terminal methylation motif GJD98_RS06750 PF07963 Prokaryotic N-terminal methylation motif GJD98_RS06750 PF08334 Type II secretion system (T2SS), protein G GJD98_RS06755 PF00482 Type II secretion system (T2SS), protein F GJD98_RS06760 PF03951 Glutamine synthetase, beta-Grasp domain GJD98_RS06760 PF00120 Glutamine synthetase, catalytic domain GJD98_RS06770 PF03883 Peroxide stress protein YaaA GJD98_RS06775 PF00291 Pyridoxal-phosphate dependent enzyme GJD98_RS06785 PF00183 Hsp90 protein GJD98_RS06785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS06790 PF02954 Bacterial regulatory protein, Fis family GJD98_RS06795 PF02684 Lipid-A-disaccharide synthetase GJD98_RS06800 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GJD98_RS06800 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GJD98_RS06805 PF01351 Ribonuclease HII GJD98_RS06810 PF01098 Cell cycle protein GJD98_RS06815 PF00905 Penicillin binding protein transpeptidase domain GJD98_RS06815 PF03717 Penicillin-binding Protein dimerisation domain GJD98_RS06820 PF02590 Predicted SPOUT methyltransferase GJD98_RS06830 PF00854 POT family GJD98_RS06835 PF01175 Urocanase Rossmann-like domain GJD98_RS06835 PF17392 Urocanase C-terminal domain GJD98_RS06835 PF17391 Urocanase N-terminal domain GJD98_RS06840 PF00221 Aromatic amino acid lyase GJD98_RS06845 PF00171 Aldehyde dehydrogenase family GJD98_RS06850 PF00106 short chain dehydrogenase GJD98_RS06855 PF00075 RNase H GJD98_RS06860 PF00929 Exonuclease GJD98_RS06880 PF01521 Iron-sulphur cluster biosynthesis GJD98_RS06895 PF01783 Ribosomal L32p protein family GJD98_RS06900 PF02504 Fatty acid synthesis protein GJD98_RS06905 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GJD98_RS06905 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GJD98_RS06910 PF00698 Acyl transferase domain GJD98_RS06920 PF00550 Phosphopantetheine attachment site GJD98_RS06925 PF02801 Beta-ketoacyl synthase, C-terminal domain GJD98_RS06925 PF00109 Beta-ketoacyl synthase, N-terminal domain GJD98_RS06930 PF02618 YceG-like family GJD98_RS06935 PF02223 Thymidylate kinase GJD98_RS06940 PF12169 DNA polymerase III subunits gamma and tau domain III GJD98_RS06950 PF01026 TatD related DNase GJD98_RS06955 PF03702 Anhydro-N-acetylmuramic acid kinase GJD98_RS06965 PF07690 Major Facilitator Superfamily GJD98_RS06970 PF00535 Glycosyl transferase family 2 GJD98_RS06995 PF05191 Adenylate kinase, active site lid GJD98_RS07000 PF00085 Thioredoxin GJD98_RS07005 PF01266 FAD dependent oxidoreductase GJD98_RS07005 PF16901 C-terminal domain of alpha-glycerophosphate oxidase GJD98_RS07010 PF02782 FGGY family of carbohydrate kinases, C-terminal domain GJD98_RS07010 PF00370 FGGY family of carbohydrate kinases, N-terminal domain GJD98_RS07015 PF00285 Citrate synthase, C-terminal domain GJD98_RS07025 PF00521 DNA gyrase/topoisomerase IV, subunit A GJD98_RS07025 PF03989 DNA gyrase C-terminal domain, beta-propeller GJD98_RS07030 PF00266 Aminotransferase class-V GJD98_RS07035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) GJD98_RS07040 PF02224 Cytidylate kinase GJD98_RS07045 PF00575 S1 RNA binding domain GJD98_RS07055 PF18073 Rubredoxin metal binding domain GJD98_RS07060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family GJD98_RS07065 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family GJD98_RS07075 PF00106 short chain dehydrogenase GJD98_RS07090 PF01040 UbiA prenyltransferase family GJD98_RS07105 PF01791 DeoC/LacD family aldolase GJD98_RS07110 PF01048 Phosphorylase superfamily GJD98_RS07115 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region GJD98_RS07125 PF00672 HAMP domain GJD98_RS07125 PF16750 Sensor domain of 2-component histidine kinase GJD98_RS07125 PF00512 His Kinase A (phospho-acceptor) domain GJD98_RS07125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS07130 PF00072 Response regulator receiver domain GJD98_RS07130 PF00486 Transcriptional regulatory protein, C terminal GJD98_RS07135 PF03471 Transporter associated domain GJD98_RS07135 PF00571 CBS domain GJD98_RS07140 PF02130 Uncharacterized protein family UPF0054 GJD98_RS07145 PF02562 PhoH-like protein GJD98_RS07150 PF02811 PHP domain GJD98_RS07155 PF01300 Telomere recombination GJD98_RS07160 PF00579 tRNA synthetases class I (W and Y) GJD98_RS07165 PF02616 Segregation and condensation protein ScpA GJD98_RS07170 PF04079 Segregation and condensation complex subunit ScpB GJD98_RS07175 PF00849 RNA pseudouridylate synthase GJD98_RS07175 PF01479 S4 domain GJD98_RS07195 PF01161 Phosphatidylethanolamine-binding protein GJD98_RS07210 PF07690 Major Facilitator Superfamily GJD98_RS07220 PF05958 tRNA (Uracil-5-)-methyltransferase GJD98_RS07220 PF01938 TRAM domain GJD98_RS07225 PF04607 Region found in RelA / SpoT proteins GJD98_RS07225 PF02824 TGS domain GJD98_RS07225 PF13291 ACT domain GJD98_RS07235 PF00155 Aminotransferase class I and II GJD98_RS07245 PF17768 RecJ OB domain GJD98_RS07245 PF02272 DHHA1 domain GJD98_RS07245 PF01368 DHH family GJD98_RS07250 PF01207 Dihydrouridine synthase (Dus) GJD98_RS07255 PF07517 SecA DEAD-like domain GJD98_RS07255 PF01043 SecA preprotein cross-linking domain GJD98_RS07255 PF07516 SecA Wing and Scaffold domain GJD98_RS07255 PF02810 SEC-C motif GJD98_RS07260 PF00293 NUDIX domain GJD98_RS07275 PF01121 Dephospho-CoA kinase GJD98_RS07285 PF12792 CSS motif domain associated with EAL GJD98_RS07285 PF00563 EAL domain GJD98_RS07295 PF00202 Aminotransferase class-III GJD98_RS07300 PF06968 Biotin and Thiamin Synthesis associated domain GJD98_RS07300 PF04055 Radical SAM superfamily GJD98_RS07305 PF00155 Aminotransferase class I and II GJD98_RS07310 PF12697 Alpha/beta hydrolase family GJD98_RS07330 PF00152 tRNA synthetases class II (D, K and N) GJD98_RS07330 PF02938 GAD domain GJD98_RS07330 PF01336 OB-fold nucleic acid binding domain GJD98_RS07335 PF12794 Mechanosensitive ion channel inner membrane domain 1 GJD98_RS07335 PF12795 Mechanosensitive ion channel porin domain GJD98_RS07335 PF00924 Mechanosensitive ion channel GJD98_RS07340 PF02976 DNA mismatch repair enzyme MutH GJD98_RS07355 PF03793 PASTA domain GJD98_RS07355 PF00069 Protein kinase domain GJD98_RS07370 PF01037 Lrp/AsnC ligand binding domain GJD98_RS07390 PF00211 Adenylate and Guanylate cyclase catalytic domain GJD98_RS07415 PF12252 Dot/Icm substrate protein GJD98_RS07420 PF11940 Domain of unknown function (DUF3458) Ig-like fold GJD98_RS07420 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GJD98_RS07420 PF01433 Peptidase family M1 domain GJD98_RS07440 PF00583 Acetyltransferase (GNAT) family GJD98_RS07445 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GJD98_RS07445 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJD98_RS07450 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GJD98_RS07450 PF00364 Biotin-requiring enzyme GJD98_RS07450 PF02817 e3 binding domain GJD98_RS07455 PF00456 Transketolase, thiamine diphosphate binding domain GJD98_RS07455 PF17831 Pyruvate dehydrogenase E1 component middle domain GJD98_RS07465 PF03186 CobD/Cbib protein GJD98_RS07470 PF02254 TrkA-N domain GJD98_RS07470 PF00999 Sodium/hydrogen exchanger family GJD98_RS07475 PF03330 Lytic transglycolase GJD98_RS07475 PF05036 Sporulation related domain GJD98_RS07480 PF07943 Penicillin-binding protein 5, C-terminal domain GJD98_RS07480 PF00768 D-alanyl-D-alanine carboxypeptidase GJD98_RS07485 PF01063 Amino-transferase class IV GJD98_RS07490 PF04359 Protein of unknown function (DUF493) GJD98_RS07495 PF03099 Biotin/lipoate A/B protein ligase family GJD98_RS07500 PF09335 SNARE associated Golgi protein GJD98_RS07510 PF03734 L,D-transpeptidase catalytic domain GJD98_RS07515 PF00664 ABC transporter transmembrane region GJD98_RS07515 PF00005 ABC transporter GJD98_RS07515 PF03412 Peptidase C39 family GJD98_RS07530 PF00156 Phosphoribosyl transferase domain GJD98_RS07545 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain GJD98_RS07545 PF00437 Type II/IV secretion system protein GJD98_RS07550 PF00482 Type II secretion system (T2SS), protein F GJD98_RS07555 PF06750 Bacterial Peptidase A24 N-terminal domain GJD98_RS07555 PF01478 Type IV leader peptidase family GJD98_RS07575 PF03618 Kinase/pyrophosphorylase GJD98_RS07580 PF03972 MmgE/PrpD family GJD98_RS07585 PF00285 Citrate synthase, C-terminal domain GJD98_RS07590 PF02567 Phenazine biosynthesis-like protein GJD98_RS07595 PF05430 S-adenosyl-L-methionine-dependent methyltransferase GJD98_RS07595 PF01266 FAD dependent oxidoreductase GJD98_RS07600 PF00854 POT family GJD98_RS07605 PF00202 Aminotransferase class-III GJD98_RS07610 PF00301 Rubredoxin GJD98_RS07615 PF03653 Uncharacterised protein family (UPF0093) GJD98_RS07620 PF03741 Integral membrane protein TerC family GJD98_RS07625 PF12627 Probable RNA and SrmB- binding site of polymerase A GJD98_RS07625 PF12626 Polymerase A arginine-rich C-terminus GJD98_RS07625 PF01743 Poly A polymerase head domain GJD98_RS07630 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) GJD98_RS07635 PF00582 Universal stress protein family GJD98_RS07640 PF01926 50S ribosome-binding GTPase GJD98_RS07640 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal GJD98_RS07645 PF13360 PQQ-like domain GJD98_RS07655 PF13393 Histidyl-tRNA synthetase GJD98_RS07655 PF03129 Anticodon binding domain GJD98_RS07670 PF04055 Radical SAM superfamily GJD98_RS07675 PF00334 Nucleoside diphosphate kinase GJD98_RS07685 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) GJD98_RS07695 PF00149 Calcineurin-like phosphoesterase GJD98_RS07700 PF03775 Septum formation inhibitor MinC, C-terminal domain GJD98_RS07700 PF05209 Septum formation inhibitor MinC, N-terminal domain GJD98_RS07705 PF13193 AMP-binding enzyme C-terminal domain GJD98_RS07705 PF00501 AMP-binding enzyme GJD98_RS07710 PF00497 Bacterial extracellular solute-binding proteins, family 3 GJD98_RS07715 PF00293 NUDIX domain GJD98_RS07720 PF00425 chorismate binding enzyme GJD98_RS07720 PF04715 Anthranilate synthase component I, N terminal region GJD98_RS07725 PF00676 Dehydrogenase E1 component GJD98_RS07730 PF02779 Transketolase, pyrimidine binding domain GJD98_RS07730 PF02780 Transketolase, C-terminal domain GJD98_RS07735 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) GJD98_RS07735 PF00364 Biotin-requiring enzyme GJD98_RS07735 PF02817 e3 binding domain GJD98_RS07740 PF12795 Mechanosensitive ion channel porin domain GJD98_RS07740 PF12794 Mechanosensitive ion channel inner membrane domain 1 GJD98_RS07740 PF00924 Mechanosensitive ion channel GJD98_RS07745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GJD98_RS07745 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJD98_RS07745 PF00403 Heavy-metal-associated domain GJD98_RS07760 PF09084 NMT1/THI5 like GJD98_RS07765 PF01266 FAD dependent oxidoreductase GJD98_RS07775 PF05690 Thiazole biosynthesis protein ThiG GJD98_RS07780 PF02581 Thiamine monophosphate synthase GJD98_RS07785 PF00581 Rhodanese-like domain GJD98_RS07785 PF00899 ThiF family GJD98_RS07795 PF07676 WD40-like Beta Propeller Repeat GJD98_RS07795 PF04052 TolB amino-terminal domain GJD98_RS07805 PF02472 Biopolymer transport protein ExbD/TolR GJD98_RS07810 PF01618 MotA/TolQ/ExbB proton channel family GJD98_RS07815 PF03061 Thioesterase superfamily GJD98_RS07820 PF17864 RuvB AAA lid domain GJD98_RS07820 PF05496 Holliday junction DNA helicase RuvB P-loop domain GJD98_RS07820 PF05491 RuvB C-terminal winged helix domain GJD98_RS07825 PF08281 Sigma-70, region 4 GJD98_RS07825 PF04542 Sigma-70 region 2 GJD98_RS07835 PF03937 Flavinator of succinate dehydrogenase GJD98_RS07845 PF01292 Prokaryotic cytochrome b561 GJD98_RS07850 PF05088 Bacterial NAD-glutamate dehydrogenase GJD98_RS07855 PF03734 L,D-transpeptidase catalytic domain GJD98_RS07855 PF01476 LysM domain GJD98_RS07860 PF00171 Aldehyde dehydrogenase family GJD98_RS07865 PF01066 CDP-alcohol phosphatidyltransferase GJD98_RS07890 PF01281 Ribosomal protein L9, N-terminal domain GJD98_RS07890 PF03948 Ribosomal protein L9, C-terminal domain GJD98_RS07900 PF01084 Ribosomal protein S18 GJD98_RS07905 PF01250 Ribosomal protein S6 GJD98_RS07910 PF02599 Global regulator protein family GJD98_RS07920 PF01476 LysM domain GJD98_RS07920 PF17969 L,D-transpeptidase C-terminal domain GJD98_RS07920 PF03734 L,D-transpeptidase catalytic domain GJD98_RS07925 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GJD98_RS07925 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GJD98_RS07925 PF00378 Enoyl-CoA hydratase/isomerase GJD98_RS07930 PF00108 Thiolase, N-terminal domain GJD98_RS07930 PF02803 Thiolase, C-terminal domain GJD98_RS07970 PF05175 Methyltransferase small domain GJD98_RS07975 PF00311 Phosphoenolpyruvate carboxylase GJD98_RS07980 PF00293 NUDIX domain GJD98_RS07990 PF01472 PUA domain GJD98_RS07990 PF00696 Amino acid kinase family GJD98_RS07995 PF07739 TipAS antibiotic-recognition domain GJD98_RS07995 PF13411 MerR HTH family regulatory protein GJD98_RS08000 PF13411 MerR HTH family regulatory protein GJD98_RS08000 PF07739 TipAS antibiotic-recognition domain GJD98_RS08010 PF13673 Acetyltransferase (GNAT) domain GJD98_RS08010 PF04229 GrpB protein GJD98_RS08015 PF00664 ABC transporter transmembrane region GJD98_RS08015 PF00005 ABC transporter GJD98_RS08020 PF00005 ABC transporter GJD98_RS08020 PF12848 ABC transporter GJD98_RS08030 PF00905 Penicillin binding protein transpeptidase domain GJD98_RS08035 PF00905 Penicillin binding protein transpeptidase domain GJD98_RS08035 PF03717 Penicillin-binding Protein dimerisation domain GJD98_RS08055 PF01142 tRNA pseudouridine synthase D (TruD) GJD98_RS08060 PF00561 alpha/beta hydrolase fold GJD98_RS08095 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GJD98_RS08095 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GJD98_RS08100 PF00534 Glycosyl transferases group 1 GJD98_RS08100 PF13439 Glycosyltransferase Family 4 GJD98_RS08110 PF02913 FAD linked oxidases, C-terminal domain GJD98_RS08110 PF01565 FAD binding domain GJD98_RS08110 PF13183 4Fe-4S dicluster domain GJD98_RS08130 PF05977 Transmembrane secretion effector GJD98_RS08140 PF01169 Uncharacterized protein family UPF0016 GJD98_RS08145 PF04052 TolB amino-terminal domain GJD98_RS08145 PF07676 WD40-like Beta Propeller Repeat GJD98_RS08155 PF00291 Pyridoxal-phosphate dependent enzyme GJD98_RS08155 PF14821 Threonine synthase N terminus GJD98_RS08170 PF01292 Prokaryotic cytochrome b561 GJD98_RS08175 PF04264 YceI-like domain GJD98_RS08185 PF01261 Xylose isomerase-like TIM barrel GJD98_RS08190 PF00205 Thiamine pyrophosphate enzyme, central domain GJD98_RS08190 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain GJD98_RS08190 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain GJD98_RS08195 PF00294 pfkB family carbohydrate kinase GJD98_RS08200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold GJD98_RS08200 PF02894 Oxidoreductase family, C-terminal alpha/beta domain GJD98_RS08205 PF00083 Sugar (and other) transporter GJD98_RS08215 PF04151 Bacterial pre-peptidase C-terminal domain GJD98_RS08215 PF02868 Thermolysin metallopeptidase, alpha-helical domain GJD98_RS08215 PF01447 Thermolysin metallopeptidase, catalytic domain GJD98_RS08215 PF03413 Peptidase propeptide and YPEB domain GJD98_RS08215 PF07504 Fungalysin/Thermolysin Propeptide Motif GJD98_RS08230 PF13520 Amino acid permease GJD98_RS08260 PF00905 Penicillin binding protein transpeptidase domain GJD98_RS08260 PF00912 Transglycosylase GJD98_RS08260 PF06832 Penicillin-Binding Protein C-terminus Family GJD98_RS08265 PF00207 Alpha-2-macroglobulin family GJD98_RS08265 PF07703 Alpha-2-macroglobulin bait region domain GJD98_RS08265 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain GJD98_RS08265 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain GJD98_RS08265 PF17962 Bacterial macroglobulin domain 6 GJD98_RS08265 PF01835 MG2 domain GJD98_RS08265 PF11974 Bacterial alpha-2-macroglobulin MG3 domain GJD98_RS08305 PF00551 Formyl transferase GJD98_RS08310 PF02844 Phosphoribosylglycinamide synthetase, N domain GJD98_RS08310 PF02843 Phosphoribosylglycinamide synthetase, C domain GJD98_RS08310 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GJD98_RS08315 PF00156 Phosphoribosyl transferase domain GJD98_RS08320 PF01259 SAICAR synthetase GJD98_RS08330 PF00586 AIR synthase related protein, N-terminal domain GJD98_RS08330 PF02769 AIR synthase related protein, C-terminal domain GJD98_RS08335 PF02769 AIR synthase related protein, C-terminal domain GJD98_RS08335 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain GJD98_RS08335 PF00586 AIR synthase related protein, N-terminal domain GJD98_RS08350 PF11412 Disulphide bond corrector protein DsbC GJD98_RS08350 PF02683 Cytochrome C biogenesis protein transmembrane region GJD98_RS08360 PF00106 short chain dehydrogenase GJD98_RS08390 PF02120 Flagellar hook-length control protein FliK GJD98_RS08400 PF00694 Aconitase C-terminal domain GJD98_RS08400 PF00330 Aconitase family (aconitate hydratase) GJD98_RS08405 PF13520 Amino acid permease GJD98_RS08425 PF18327 Proline utilization A proline dehydrogenase N-terminal domain GJD98_RS08425 PF00171 Aldehyde dehydrogenase family GJD98_RS08425 PF01619 Proline dehydrogenase GJD98_RS08425 PF14850 DNA-binding domain of Proline dehydrogenase GJD98_RS08435 PF04352 ProQ/FINO family GJD98_RS08435 PF17516 ProQ C-terminal domain GJD98_RS08460 PF11799 impB/mucB/samB family C-terminal domain GJD98_RS08460 PF13438 Domain of unknown function (DUF4113) GJD98_RS08460 PF00817 impB/mucB/samB family GJD98_RS08460 PF11798 IMS family HHH motif GJD98_RS08465 PF00717 Peptidase S24-like GJD98_RS08475 PF04958 Arginine N-succinyltransferase beta subunit GJD98_RS08480 PF00171 Aldehyde dehydrogenase family GJD98_RS08485 PF04996 Succinylarginine dihydrolase GJD98_RS08500 PF01765 Ribosome recycling factor GJD98_RS08505 PF00696 Amino acid kinase family GJD98_RS08510 PF00889 Elongation factor TS GJD98_RS08515 PF00318 Ribosomal protein S2 GJD98_RS08540 PF00557 Metallopeptidase family M24 GJD98_RS08545 PF03445 Putative nucleotidyltransferase DUF294 GJD98_RS08545 PF01966 HD domain GJD98_RS08545 PF08335 GlnD PII-uridylyltransferase GJD98_RS08550 PF14437 MafB19-like deaminase GJD98_RS08555 PF00117 Glutamine amidotransferase class-I GJD98_RS08555 PF00958 GMP synthase C terminal domain GJD98_RS08555 PF02540 NAD synthase GJD98_RS08560 PF00571 CBS domain GJD98_RS08560 PF00478 IMP dehydrogenase / GMP reductase domain GJD98_RS08565 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GJD98_RS08570 PF03776 Septum formation topological specificity factor MinE GJD98_RS08575 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJD98_RS08575 PF02770 Acyl-CoA dehydrogenase, middle domain GJD98_RS08575 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJD98_RS08575 PF09317 Domain of unknown function (DUF1974) GJD98_RS08580 PF08386 TAP-like protein GJD98_RS08580 PF00561 alpha/beta hydrolase fold GJD98_RS08590 PF00005 ABC transporter GJD98_RS08590 PF17912 MalK OB fold domain GJD98_RS08595 PF00528 Binding-protein-dependent transport system inner membrane component GJD98_RS08600 PF00528 Binding-protein-dependent transport system inner membrane component GJD98_RS08605 PF08240 Alcohol dehydrogenase GroES-like domain GJD98_RS08605 PF00107 Zinc-binding dehydrogenase GJD98_RS08610 PF00654 Voltage gated chloride channel GJD98_RS08615 PF04715 Anthranilate synthase component I, N terminal region GJD98_RS08615 PF00425 chorismate binding enzyme GJD98_RS08615 PF00117 Glutamine amidotransferase class-I GJD98_RS08620 PF02686 Glu-tRNAGln amidotransferase C subunit GJD98_RS08625 PF01425 Amidase GJD98_RS08630 PF02637 GatB domain GJD98_RS08630 PF02934 GatB/GatE catalytic domain GJD98_RS08640 PF00211 Adenylate and Guanylate cyclase catalytic domain GJD98_RS08660 PF02954 Bacterial regulatory protein, Fis family GJD98_RS08665 PF01521 Iron-sulphur cluster biosynthesis GJD98_RS08675 PF00266 Aminotransferase class-V GJD98_RS08680 PF00588 SpoU rRNA Methylase family GJD98_RS08685 PF00459 Inositol monophosphatase family GJD98_RS08690 PF01343 Peptidase family S49 GJD98_RS08695 PF10431 C-terminal, D2-small domain, of ClpB protein GJD98_RS08695 PF02861 Clp amino terminal domain, pathogenicity island component GJD98_RS08695 PF17871 AAA lid domain GJD98_RS08695 PF07724 AAA domain (Cdc48 subfamily) GJD98_RS08695 PF00004 ATPase family associated with various cellular activities (AAA) GJD98_RS08710 PF08245 Mur ligase middle domain GJD98_RS08710 PF02875 Mur ligase family, glutamate ligase domain GJD98_RS08710 PF01225 Mur ligase family, catalytic domain GJD98_RS08730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GJD98_RS08730 PF18269 T3SS EscN ATPase C-terminal domain GJD98_RS08740 PF01706 FliG C-terminal domain GJD98_RS08740 PF14841 FliG middle domain GJD98_RS08740 PF14842 FliG N-terminal domain GJD98_RS08745 PF08345 Flagellar M-ring protein C-terminal GJD98_RS08745 PF01514 Secretory protein of YscJ/FliF family GJD98_RS08750 PF02049 Flagellar hook-basal body complex protein FliE GJD98_RS08755 PF00072 Response regulator receiver domain GJD98_RS08755 PF02954 Bacterial regulatory protein, Fis family GJD98_RS08755 PF00158 Sigma-54 interaction domain GJD98_RS08760 PF13188 PAS domain GJD98_RS08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS08760 PF00512 His Kinase A (phospho-acceptor) domain GJD98_RS08765 PF12002 MgsA AAA+ ATPase C terminal GJD98_RS08765 PF00004 ATPase family associated with various cellular activities (AAA) GJD98_RS08765 PF16193 AAA C-terminal domain GJD98_RS08770 PF03548 Outer membrane lipoprotein carrier protein LolA GJD98_RS08775 PF17854 FtsK alpha domain GJD98_RS08775 PF13491 4TM region of DNA translocase FtsK/SpoIIIE GJD98_RS08775 PF09397 Ftsk gamma domain GJD98_RS08775 PF01580 FtsK/SpoIIIE family GJD98_RS08780 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJD98_RS08785 PF03588 Leucyl/phenylalanyl-tRNA protein transferase GJD98_RS08790 PF00581 Rhodanese-like domain GJD98_RS08790 PF01206 Sulfurtransferase TusA GJD98_RS08795 PF01176 Translation initiation factor 1A / IF-1 GJD98_RS08800 PF01523 Putative modulator of DNA gyrase GJD98_RS08815 PF02867 Ribonucleotide reductase, barrel domain GJD98_RS08815 PF00317 Ribonucleotide reductase, all-alpha domain GJD98_RS08815 PF03477 ATP cone domain GJD98_RS08820 PF00268 Ribonucleotide reductase, small chain GJD98_RS08830 PF01336 OB-fold nucleic acid binding domain GJD98_RS08830 PF00152 tRNA synthetases class II (D, K and N) GJD98_RS08845 PF13677 Membrane MotB of proton-channel complex MotA/MotB GJD98_RS08845 PF00691 OmpA family GJD98_RS08850 PF01618 MotA/TolQ/ExbB proton channel family GJD98_RS08855 PF04545 Sigma-70, region 4 GJD98_RS08855 PF04539 Sigma-70 region 3 GJD98_RS08855 PF04542 Sigma-70 region 2 GJD98_RS08860 PF10609 NUBPL iron-transfer P-loop NTPase GJD98_RS08865 PF00448 SRP54-type protein, GTPase domain GJD98_RS08870 PF00771 FHIPEP family GJD98_RS08875 PF01312 FlhB HrpN YscU SpaS Family GJD98_RS08880 PF01311 Bacterial export proteins, family 1 GJD98_RS08885 PF01313 Bacterial export proteins, family 3 GJD98_RS08890 PF00813 FliP family GJD98_RS08895 PF04347 Flagellar biosynthesis protein, FliO GJD98_RS08900 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GJD98_RS08905 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term GJD98_RS08905 PF02154 Flagellar motor switch protein FliM GJD98_RS08915 PF01565 FAD binding domain GJD98_RS08915 PF04030 D-arabinono-1,4-lactone oxidase GJD98_RS08925 PF03466 LysR substrate binding domain GJD98_RS08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJD98_RS08955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GJD98_RS08955 PF01411 tRNA synthetases class II (A) GJD98_RS08955 PF02272 DHHA1 domain GJD98_RS08960 PF02631 RecX family GJD98_RS08965 PF00154 recA bacterial DNA recombination protein GJD98_RS08980 PF02464 Competence-damaged protein GJD98_RS08990 PF00488 MutS domain V GJD98_RS08990 PF05190 MutS family domain IV GJD98_RS08990 PF05192 MutS domain III GJD98_RS08990 PF01624 MutS domain I GJD98_RS08990 PF05188 MutS domain II GJD98_RS09000 PF04357 TamB, inner membrane protein subunit of TAM complex GJD98_RS09005 PF00490 Delta-aminolevulinic acid dehydratase GJD98_RS09015 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) GJD98_RS09020 PF00696 Amino acid kinase family GJD98_RS09020 PF01842 ACT domain GJD98_RS09025 PF12705 PD-(D/E)XK nuclease superfamily GJD98_RS09025 PF00580 UvrD/REP helicase N-terminal domain GJD98_RS09025 PF13361 UvrD-like helicase C-terminal domain GJD98_RS09030 PF10609 NUBPL iron-transfer P-loop NTPase GJD98_RS09040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJD98_RS09040 PF03466 LysR substrate binding domain GJD98_RS09045 PF07690 Major Facilitator Superfamily GJD98_RS09055 PF02606 Tetraacyldisaccharide-1-P 4'-kinase GJD98_RS09060 PF00005 ABC transporter GJD98_RS09060 PF00664 ABC transporter transmembrane region GJD98_RS09070 PF01180 Dihydroorotate dehydrogenase GJD98_RS09085 PF02770 Acyl-CoA dehydrogenase, middle domain GJD98_RS09085 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJD98_RS09085 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJD98_RS09090 PF02803 Thiolase, C-terminal domain GJD98_RS09090 PF00108 Thiolase, N-terminal domain GJD98_RS09100 PF01039 Carboxyl transferase domain GJD98_RS09105 PF00378 Enoyl-CoA hydratase/isomerase GJD98_RS09110 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GJD98_RS09110 PF00364 Biotin-requiring enzyme GJD98_RS09110 PF00289 Biotin carboxylase, N-terminal domain GJD98_RS09110 PF02785 Biotin carboxylase C-terminal domain GJD98_RS09115 PF00682 HMGL-like GJD98_RS09120 PF00501 AMP-binding enzyme GJD98_RS09120 PF13193 AMP-binding enzyme C-terminal domain GJD98_RS09130 PF00005 ABC transporter GJD98_RS09130 PF09383 NIL domain GJD98_RS09135 PF00528 Binding-protein-dependent transport system inner membrane component GJD98_RS09140 PF03180 NLPA lipoprotein GJD98_RS09150 PF04445 Putative SAM-dependent methyltransferase GJD98_RS09160 PF05746 DALR anticodon binding domain GJD98_RS09160 PF02092 Glycyl-tRNA synthetase beta subunit GJD98_RS09165 PF02091 Glycyl-tRNA synthetase alpha subunit GJD98_RS09175 PF00580 UvrD/REP helicase N-terminal domain GJD98_RS09175 PF13361 UvrD-like helicase C-terminal domain GJD98_RS09180 PF00561 alpha/beta hydrolase fold GJD98_RS09185 PF02580 D-Tyr-tRNA(Tyr) deacylase GJD98_RS09195 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain GJD98_RS09195 PF02951 Prokaryotic glutathione synthetase, N-terminal domain GJD98_RS09215 PF00581 Rhodanese-like domain GJD98_RS09225 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase GJD98_RS09230 PF00485 Phosphoribulokinase / Uridine kinase family GJD98_RS09255 PF00216 Bacterial DNA-binding protein GJD98_RS09260 PF05362 Lon protease (S16) C-terminal proteolytic domain GJD98_RS09260 PF00004 ATPase family associated with various cellular activities (AAA) GJD98_RS09260 PF02190 ATP-dependent protease La (LON) substrate-binding domain GJD98_RS09265 PF10431 C-terminal, D2-small domain, of ClpB protein GJD98_RS09265 PF07724 AAA domain (Cdc48 subfamily) GJD98_RS09265 PF06689 ClpX C4-type zinc finger GJD98_RS09270 PF00574 Clp protease GJD98_RS09275 PF05697 Bacterial trigger factor protein (TF) GJD98_RS09275 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase GJD98_RS09275 PF05698 Bacterial trigger factor protein (TF) C-terminus GJD98_RS09305 PF12848 ABC transporter GJD98_RS09305 PF00005 ABC transporter GJD98_RS09310 PF14622 Ribonuclease-III-like GJD98_RS09310 PF00035 Double-stranded RNA binding motif GJD98_RS09320 PF10502 Signal peptidase, peptidase S26 GJD98_RS09325 PF06421 GTP-binding protein LepA C-terminus GJD98_RS09325 PF03144 Elongation factor Tu domain 2 GJD98_RS09325 PF00009 Elongation factor Tu GTP binding domain GJD98_RS09325 PF00679 Elongation factor G C-terminus GJD98_RS09330 PF13406 Transglycosylase SLT domain GJD98_RS09340 PF04612 Type II secretion system (T2SS), protein M GJD98_RS09350 PF13286 Phosphohydrolase-associated domain GJD98_RS09350 PF01966 HD domain GJD98_RS09375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GJD98_RS09380 PF03350 Uncharacterized protein family, UPF0114 GJD98_RS09395 PF00708 Acylphosphatase GJD98_RS09410 PF07859 alpha/beta hydrolase fold GJD98_RS09430 PF07690 Major Facilitator Superfamily GJD98_RS09435 PF00654 Voltage gated chloride channel GJD98_RS09445 PF02810 SEC-C motif GJD98_RS09450 PF00999 Sodium/hydrogen exchanger family GJD98_RS09450 PF02254 TrkA-N domain GJD98_RS09455 PF17863 AAA lid domain GJD98_RS09455 PF07726 ATPase family associated with various cellular activities (AAA) GJD98_RS09465 PF11992 Domain of unknown function (DUF3488) GJD98_RS09465 PF13559 Domain of unknown function (DUF4129) GJD98_RS09465 PF01841 Transglutaminase-like superfamily GJD98_RS09470 PF08007 Cupin superfamily protein GJD98_RS09495 PF04315 Elongation factor P hydroxylase GJD98_RS09505 PF02798 Glutathione S-transferase, N-terminal domain GJD98_RS09505 PF00043 Glutathione S-transferase, C-terminal domain GJD98_RS09515 PF00144 Beta-lactamase GJD98_RS09520 PF00749 tRNA synthetases class I (E and Q), catalytic domain GJD98_RS09525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS09525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) GJD98_RS09525 PF00512 His Kinase A (phospho-acceptor) domain GJD98_RS09525 PF01627 Hpt domain GJD98_RS09525 PF00072 Response regulator receiver domain GJD98_RS09525 PF00672 HAMP domain GJD98_RS09530 PF00365 Phosphofructokinase GJD98_RS09535 PF00114 Pilin (bacterial filament) GJD98_RS09535 PF07963 Prokaryotic N-terminal methylation motif GJD98_RS09540 PF07963 Prokaryotic N-terminal methylation motif GJD98_RS09540 PF00114 Pilin (bacterial filament) GJD98_RS09545 PF01722 BolA-like protein GJD98_RS09550 PF13520 Amino acid permease GJD98_RS09555 PF00553 Cellulose binding domain GJD98_RS09555 PF00150 Cellulase (glycosyl hydrolase family 5) GJD98_RS09555 PF02013 Cellulose or protein binding domain GJD98_RS09560 PF02348 Cytidylyltransferase GJD98_RS09565 PF03966 Trm112p-like protein GJD98_RS09570 PF00814 Glycoprotease family GJD98_RS09575 PF13307 Helicase C-terminal domain GJD98_RS09575 PF04851 Type III restriction enzyme, res subunit GJD98_RS09580 PF11953 Domain of unknown function (DUF3470) GJD98_RS09580 PF00037 4Fe-4S binding domain GJD98_RS09600 PF04362 Bacterial Fe(2+) trafficking GJD98_RS09605 PF04227 Indigoidine synthase A like protein GJD98_RS09635 PF07804 HipA-like C-terminal domain GJD98_RS09635 PF13657 HipA N-terminal domain GJD98_RS09645 PF05050 Methyltransferase FkbM domain GJD98_RS09660 PF02801 Beta-ketoacyl synthase, C-terminal domain GJD98_RS09660 PF00109 Beta-ketoacyl synthase, N-terminal domain GJD98_RS09660 PF16197 Ketoacyl-synthetase C-terminal extension GJD98_RS09660 PF00668 Condensation domain GJD98_RS09660 PF00698 Acyl transferase domain GJD98_RS09660 PF00550 Phosphopantetheine attachment site GJD98_RS09665 PF00550 Phosphopantetheine attachment site GJD98_RS09665 PF00975 Thioesterase domain GJD98_RS09665 PF00501 AMP-binding enzyme GJD98_RS09665 PF13193 AMP-binding enzyme C-terminal domain GJD98_RS09665 PF00668 Condensation domain GJD98_RS09670 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJD98_RS09670 PF02770 Acyl-CoA dehydrogenase, middle domain GJD98_RS09670 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJD98_RS09675 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain GJD98_RS09675 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain GJD98_RS09690 PF02112 cAMP phosphodiesterases class-II GJD98_RS09725 PF00149 Calcineurin-like phosphoesterase GJD98_RS09745 PF13378 Enolase C-terminal domain-like GJD98_RS09745 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain GJD98_RS09775 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GJD98_RS09805 PF18665 Tetracyclin repressor-like, C-terminal domain GJD98_RS09805 PF00440 Bacterial regulatory proteins, tetR family GJD98_RS09825 PF02798 Glutathione S-transferase, N-terminal domain GJD98_RS09825 PF00043 Glutathione S-transferase, C-terminal domain GJD98_RS09830 PF02566 OsmC-like protein GJD98_RS09865 PF04488 Glycosyltransferase sugar-binding region containing DXD motif GJD98_RS09900 PF01979 Amidohydrolase family GJD98_RS09915 PF01872 RibD C-terminal domain GJD98_RS09945 PF03562 MltA specific insert domain GJD98_RS09945 PF06725 3D domain GJD98_RS09965 PF00155 Aminotransferase class I and II GJD98_RS09970 PF01329 Pterin 4 alpha carbinolamine dehydratase GJD98_RS09975 PF02355 Protein export membrane protein GJD98_RS09975 PF07549 SecD/SecF GG Motif GJD98_RS09980 PF07549 SecD/SecF GG Motif GJD98_RS09980 PF13721 SecD export protein N-terminal TM region GJD98_RS09980 PF02355 Protein export membrane protein GJD98_RS09985 PF02699 Preprotein translocase subunit GJD98_RS09990 PF01702 Queuine tRNA-ribosyltransferase GJD98_RS09995 PF02547 Queuosine biosynthesis protein GJD98_RS10005 PF00005 ABC transporter GJD98_RS10005 PF16326 ABC transporter C-terminal domain GJD98_RS10005 PF12848 ABC transporter GJD98_RS10015 PF01042 Endoribonuclease L-PSP GJD98_RS10020 PF13291 ACT domain GJD98_RS10020 PF04607 Region found in RelA / SpoT proteins GJD98_RS10020 PF02824 TGS domain GJD98_RS10025 PF01192 RNA polymerase Rpb6 GJD98_RS10030 PF00625 Guanylate kinase GJD98_RS10035 PF03755 YicC-like family, N-terminal region GJD98_RS10035 PF08340 Domain of unknown function (DUF1732) GJD98_RS10040 PF03725 3' exoribonuclease family, domain 2 GJD98_RS10040 PF01138 3' exoribonuclease family, domain 1 GJD98_RS10045 PF00437 Type II/IV secretion system protein GJD98_RS10050 PF01168 Alanine racemase, N-terminal domain GJD98_RS10055 PF14748 Pyrroline-5-carboxylate reductase dimerisation GJD98_RS10055 PF03807 NADP oxidoreductase coenzyme F420-dependent GJD98_RS10075 PF00082 Subtilase family GJD98_RS10075 PF01483 Proprotein convertase P-domain GJD98_RS10080 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term GJD98_RS10080 PF12833 Helix-turn-helix domain GJD98_RS10085 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GJD98_RS10085 PF05221 S-adenosyl-L-homocysteine hydrolase GJD98_RS10090 PF00438 S-adenosylmethionine synthetase, N-terminal domain GJD98_RS10090 PF02772 S-adenosylmethionine synthetase, central domain GJD98_RS10090 PF02773 S-adenosylmethionine synthetase, C-terminal domain GJD98_RS10095 PF00117 Glutamine amidotransferase class-I GJD98_RS10095 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain GJD98_RS10100 PF00684 DnaJ central domain GJD98_RS10100 PF01556 DnaJ C terminal domain GJD98_RS10100 PF00226 DnaJ domain GJD98_RS10105 PF00012 Hsp70 protein GJD98_RS10110 PF01025 GrpE GJD98_RS10115 PF01474 Class-II DAHP synthetase family GJD98_RS10120 PF01208 Uroporphyrinogen decarboxylase (URO-D) GJD98_RS10125 PF02152 Dihydroneopterin aldolase GJD98_RS10135 PF03485 Arginyl tRNA synthetase N terminal domain GJD98_RS10135 PF05746 DALR anticodon binding domain GJD98_RS10135 PF00750 tRNA synthetases class I (R) GJD98_RS10140 PF01594 AI-2E family transporter GJD98_RS10145 PF00270 DEAD/DEAH box helicase GJD98_RS10145 PF00271 Helicase conserved C-terminal domain GJD98_RS10145 PF17191 RecG wedge domain GJD98_RS10150 PF01545 Cation efflux family GJD98_RS10150 PF16916 Dimerisation domain of Zinc Transporter GJD98_RS10160 PF02545 Maf-like protein GJD98_RS10165 PF03952 Enolase, N-terminal domain GJD98_RS10165 PF00113 Enolase, C-terminal TIM barrel domain GJD98_RS10170 PF04977 Septum formation initiator GJD98_RS10190 PF16331 TolA binding protein trimerisation GJD98_RS10195 PF00691 OmpA family GJD98_RS10210 PF09383 NIL domain GJD98_RS10210 PF00005 ABC transporter GJD98_RS10215 PF02405 Permease MlaE GJD98_RS10235 PF01070 FMN-dependent dehydrogenase GJD98_RS10240 PF00368 Hydroxymethylglutaryl-coenzyme A reductase GJD98_RS10265 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 GJD98_RS10265 PF01610 Transposase GJD98_RS10265 PF13542 Helix-turn-helix domain of transposase family ISL3 GJD98_RS10270 PF00589 Phage integrase family GJD98_RS10295 PF00854 POT family GJD98_RS10305 PF00106 short chain dehydrogenase GJD98_RS10310 PF00313 'Cold-shock' DNA-binding domain GJD98_RS10335 PF00403 Heavy-metal-associated domain GJD98_RS10345 PF01022 Bacterial regulatory protein, arsR family GJD98_RS10355 PF00873 AcrB/AcrD/AcrF family GJD98_RS10380 PF01515 Phosphate acetyl/butaryl transferase GJD98_RS10385 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GJD98_RS10385 PF00561 alpha/beta hydrolase fold GJD98_RS10400 PF00873 AcrB/AcrD/AcrF family GJD98_RS10405 PF13533 Biotin-lipoyl like GJD98_RS10420 PF00072 Response regulator receiver domain GJD98_RS10420 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS10430 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase GJD98_RS10430 PF14572 Phosphoribosyl synthetase-associated domain GJD98_RS10435 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain GJD98_RS10435 PF00591 Glycosyl transferase family, a/b domain GJD98_RS10435 PF02885 Glycosyl transferase family, helical bundle domain GJD98_RS10440 PF10996 Beta-Casp domain GJD98_RS10440 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GJD98_RS10440 PF00753 Metallo-beta-lactamase superfamily GJD98_RS10445 PF00873 AcrB/AcrD/AcrF family GJD98_RS10450 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJD98_RS10460 PF00690 Cation transporter/ATPase, N-terminus GJD98_RS10460 PF00689 Cation transporting ATPase, C-terminus GJD98_RS10485 PF02599 Global regulator protein family GJD98_RS10490 PF00437 Type II/IV secretion system protein GJD98_RS10495 PF04956 TrbC/VIRB2 family GJD98_RS10505 PF03135 CagE, TrbE, VirB family, component of type IV transporter system GJD98_RS10515 PF03524 Conjugal transfer protein GJD98_RS10525 PF03743 Bacterial conjugation TrbI-like protein GJD98_RS10540 PF04610 TrbL/VirB6 plasmid conjugal transfer protein GJD98_RS10545 PF02534 Type IV secretory system Conjugative DNA transfer GJD98_RS10550 PF10502 Signal peptidase, peptidase S26 GJD98_RS10555 PF13362 Toprim domain GJD98_RS10555 PF08401 Domain of unknown function (DUF1738) GJD98_RS10555 PF18818 Metallopeptidase superfamily domain GJD98_RS10565 PF18821 Large polyvalent protein-associated domain 7 GJD98_RS10565 PF03432 Relaxase/Mobilisation nuclease domain GJD98_RS10580 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain GJD98_RS10585 PF11657 Transcriptional activator TraM GJD98_RS10605 PF00589 Phage integrase family GJD98_RS10645 PF00005 ABC transporter GJD98_RS10645 PF00664 ABC transporter transmembrane region GJD98_RS10650 PF00664 ABC transporter transmembrane region GJD98_RS10650 PF00005 ABC transporter GJD98_RS10655 PF00248 Aldo/keto reductase family GJD98_RS10660 PF13302 Acetyltransferase (GNAT) domain GJD98_RS10675 PF02281 Transposase Tn5 dimerisation domain GJD98_RS10675 PF14706 Transposase DNA-binding GJD98_RS10675 PF01609 Transposase DDE domain GJD98_RS10680 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) GJD98_RS10705 PF02086 D12 class N6 adenine-specific DNA methyltransferase GJD98_RS10715 PF07057 DNA helicase TraI GJD98_RS10715 PF18340 DNA relaxase TraI 2B/2B-like domain GJD98_RS10715 PF18272 single-stranded DNA binding TraI N-terminal subdomain GJD98_RS10715 PF08751 TrwC relaxase GJD98_RS10735 PF06122 Conjugative relaxosome accessory transposon protein GJD98_RS10750 PF06986 Type-1V conjugative transfer system mating pair stabilisation GJD98_RS10760 PF06834 TraU protein GJD98_RS10775 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer GJD98_RS10785 PF03743 Bacterial conjugation TrbI-like protein GJD98_RS10810 PF02599 Global regulator protein family GJD98_RS10835 PF01625 Peptide methionine sulfoxide reductase GJD98_RS10835 PF01641 SelR domain GJD98_RS10840 PF01625 Peptide methionine sulfoxide reductase GJD98_RS10840 PF01641 SelR domain GJD98_RS10850 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJD98_RS10850 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GJD98_RS10855 PF04116 Fatty acid hydroxylase superfamily GJD98_RS10880 PF05114 Protein of unknown function (DUF692) GJD98_RS10905 PF01641 SelR domain GJD98_RS10905 PF01625 Peptide methionine sulfoxide reductase GJD98_RS10930 PF02281 Transposase Tn5 dimerisation domain GJD98_RS10930 PF14706 Transposase DNA-binding GJD98_RS10930 PF01609 Transposase DDE domain GJD98_RS10935 PF01610 Transposase GJD98_RS10935 PF13542 Helix-turn-helix domain of transposase family ISL3 GJD98_RS10935 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 GJD98_RS10945 PF14706 Transposase DNA-binding GJD98_RS10945 PF01609 Transposase DDE domain GJD98_RS10945 PF02281 Transposase Tn5 dimerisation domain GJD98_RS10950 PF00313 'Cold-shock' DNA-binding domain GJD98_RS10955 PF00270 DEAD/DEAH box helicase GJD98_RS10955 PF00271 Helicase conserved C-terminal domain GJD98_RS10955 PF03880 DbpA RNA binding domain GJD98_RS10970 PF00027 Cyclic nucleotide-binding domain GJD98_RS10970 PF00005 ABC transporter GJD98_RS10975 PF02705 K+ potassium transporter GJD98_RS11005 PF00563 EAL domain GJD98_RS11005 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS11005 PF03707 Bacterial signalling protein N terminal repeat GJD98_RS11010 PF08946 Osmosensory transporter coiled coil GJD98_RS11010 PF00083 Sugar (and other) transporter GJD98_RS11015 PF00873 AcrB/AcrD/AcrF family GJD98_RS11020 PF00529 HlyD membrane-fusion protein of T1SS GJD98_RS11020 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJD98_RS11035 PF03466 LysR substrate binding domain GJD98_RS11035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJD98_RS11040 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region GJD98_RS11040 PF01243 Pyridoxamine 5'-phosphate oxidase GJD98_RS11045 PF01638 HxlR-like helix-turn-helix GJD98_RS11070 PF00486 Transcriptional regulatory protein, C terminal GJD98_RS11070 PF00072 Response regulator receiver domain GJD98_RS11075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS11075 PF13426 PAS domain GJD98_RS11075 PF00072 Response regulator receiver domain GJD98_RS11075 PF00512 His Kinase A (phospho-acceptor) domain GJD98_RS11075 PF08448 PAS fold GJD98_RS11100 PF04439 Streptomycin adenylyltransferase GJD98_RS11105 PF00005 ABC transporter GJD98_RS11105 PF00664 ABC transporter transmembrane region GJD98_RS11110 PF12252 Dot/Icm substrate protein GJD98_RS11115 PF12252 Dot/Icm substrate protein GJD98_RS11125 PF12252 Dot/Icm substrate protein GJD98_RS11130 PF12252 Dot/Icm substrate protein GJD98_RS11135 PF08241 Methyltransferase domain GJD98_RS11150 PF11339 Protein of unknown function (DUF3141) GJD98_RS11160 PF02311 AraC-like ligand binding domain GJD98_RS11160 PF12833 Helix-turn-helix domain GJD98_RS11205 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain GJD98_RS11205 PF05221 S-adenosyl-L-homocysteine hydrolase GJD98_RS11210 PF13542 Helix-turn-helix domain of transposase family ISL3 GJD98_RS11210 PF01610 Transposase GJD98_RS11210 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 GJD98_RS11220 PF04909 Amidohydrolase GJD98_RS11225 PF00282 Pyridoxal-dependent decarboxylase conserved domain GJD98_RS11230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJD98_RS11235 PF00873 AcrB/AcrD/AcrF family GJD98_RS11240 PF00668 Condensation domain GJD98_RS11240 PF00975 Thioesterase domain GJD98_RS11240 PF00550 Phosphopantetheine attachment site GJD98_RS11240 PF13193 AMP-binding enzyme C-terminal domain GJD98_RS11240 PF00501 AMP-binding enzyme GJD98_RS11245 PF00072 Response regulator receiver domain GJD98_RS11245 PF09308 LuxQ, periplasmic GJD98_RS11245 PF00512 His Kinase A (phospho-acceptor) domain GJD98_RS11245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS11250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS11250 PF01627 Hpt domain GJD98_RS11250 PF00989 PAS fold GJD98_RS11250 PF18415 Histidine kinase receptor ArcB trans-membrane domain GJD98_RS11250 PF00512 His Kinase A (phospho-acceptor) domain GJD98_RS11250 PF00072 Response regulator receiver domain GJD98_RS11255 PF13649 Methyltransferase domain GJD98_RS11270 PF00550 Phosphopantetheine attachment site GJD98_RS11270 PF08659 KR domain GJD98_RS11270 PF02801 Beta-ketoacyl synthase, C-terminal domain GJD98_RS11270 PF00109 Beta-ketoacyl synthase, N-terminal domain GJD98_RS11270 PF16197 Ketoacyl-synthetase C-terminal extension GJD98_RS11270 PF00698 Acyl transferase domain GJD98_RS11285 PF03741 Integral membrane protein TerC family GJD98_RS11295 PF00011 Hsp20/alpha crystallin family GJD98_RS11300 PF00011 Hsp20/alpha crystallin family GJD98_RS11310 PF00484 Carbonic anhydrase GJD98_RS11320 PF02423 Ornithine cyclodeaminase/mu-crystallin family GJD98_RS11350 PF01139 tRNA-splicing ligase RtcB GJD98_RS11370 PF03062 MBOAT, membrane-bound O-acyltransferase family GJD98_RS11390 PF00107 Zinc-binding dehydrogenase GJD98_RS11390 PF08240 Alcohol dehydrogenase GroES-like domain GJD98_RS11395 PF01161 Phosphatidylethanolamine-binding protein GJD98_RS11420 PF08338 Domain of unknown function (DUF1731) GJD98_RS11420 PF01370 NAD dependent epimerase/dehydratase family GJD98_RS11440 PF00848 Ring hydroxylating alpha subunit (catalytic domain) GJD98_RS11440 PF00355 Rieske [2Fe-2S] domain GJD98_RS11455 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal GJD98_RS11455 PF14602 Hexapeptide repeat of succinyl-transferase GJD98_RS11455 PF00132 Bacterial transferase hexapeptide (six repeats) GJD98_RS11485 PF01039 Carboxyl transferase domain GJD98_RS11490 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GJD98_RS11490 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GJD98_RS11495 PF00501 AMP-binding enzyme GJD98_RS11500 PF13193 AMP-binding enzyme C-terminal domain GJD98_RS11500 PF00501 AMP-binding enzyme GJD98_RS11515 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal GJD98_RS11515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GJD98_RS11520 PF00550 Phosphopantetheine attachment site GJD98_RS11525 PF07690 Major Facilitator Superfamily GJD98_RS11530 PF04116 Fatty acid hydroxylase superfamily GJD98_RS11540 PF00664 ABC transporter transmembrane region GJD98_RS11540 PF00005 ABC transporter GJD98_RS11580 PF00375 Sodium:dicarboxylate symporter family GJD98_RS11590 PF09335 SNARE associated Golgi protein GJD98_RS11600 PF02540 NAD synthase GJD98_RS11600 PF00958 GMP synthase C terminal domain GJD98_RS11600 PF00117 Glutamine amidotransferase class-I GJD98_RS11605 PF00465 Iron-containing alcohol dehydrogenase GJD98_RS11610 PF00171 Aldehyde dehydrogenase family GJD98_RS11615 PF00120 Glutamine synthetase, catalytic domain GJD98_RS11625 PF05114 Protein of unknown function (DUF692) GJD98_RS11635 PF00753 Metallo-beta-lactamase superfamily GJD98_RS11635 PF10996 Beta-Casp domain GJD98_RS11635 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain GJD98_RS11650 PF04972 BON domain GJD98_RS11655 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus GJD98_RS11655 PF00561 alpha/beta hydrolase fold GJD98_RS11660 PF01515 Phosphate acetyl/butaryl transferase GJD98_RS11665 PF00871 Acetokinase family GJD98_RS11670 PF00226 DnaJ domain GJD98_RS11670 PF01556 DnaJ C terminal domain GJD98_RS11690 PF13382 Adenine deaminase C-terminal domain GJD98_RS11690 PF01979 Amidohydrolase family GJD98_RS11720 PF13416 Bacterial extracellular solute-binding protein GJD98_RS11725 PF03009 Glycerophosphoryl diester phosphodiesterase family GJD98_RS11735 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain GJD98_RS11735 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase GJD98_RS11740 PF01596 O-methyltransferase GJD98_RS11745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily GJD98_RS11755 PF14497 Glutathione S-transferase, C-terminal domain GJD98_RS11755 PF02798 Glutathione S-transferase, N-terminal domain GJD98_RS11765 PF00152 tRNA synthetases class II (D, K and N) GJD98_RS11765 PF01336 OB-fold nucleic acid binding domain GJD98_RS11775 PF00005 ABC transporter GJD98_RS11780 PF02687 FtsX-like permease family GJD98_RS11780 PF12704 MacB-like periplasmic core domain GJD98_RS11785 PF02678 Pirin GJD98_RS11785 PF05726 Pirin C-terminal cupin domain GJD98_RS11790 PF02525 Flavodoxin-like fold GJD98_RS11795 PF03466 LysR substrate binding domain GJD98_RS11795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJD98_RS11815 PF01066 CDP-alcohol phosphatidyltransferase GJD98_RS11820 PF13419 Haloacid dehalogenase-like hydrolase GJD98_RS11825 PF00849 RNA pseudouridylate synthase GJD98_RS11825 PF01479 S4 domain GJD98_RS11835 PF00575 S1 RNA binding domain GJD98_RS11835 PF10150 Ribonuclease E/G family GJD98_RS11835 PF12111 Polyribonucleotide phosphorylase C terminal GJD98_RS11845 PF18337 RapA N-terminal Tudor like domain GJD98_RS11845 PF18339 RapA N-terminal Tudor like domain 1 GJD98_RS11845 PF12137 RNA polymerase recycling family C-terminal GJD98_RS11845 PF00176 SNF2 family N-terminal domain GJD98_RS11845 PF00271 Helicase conserved C-terminal domain GJD98_RS11860 PF02774 Semialdehyde dehydrogenase, dimerisation domain GJD98_RS11860 PF01118 Semialdehyde dehydrogenase, NAD binding domain GJD98_RS11865 PF01264 Chorismate synthase GJD98_RS11870 PF05175 Methyltransferase small domain GJD98_RS11875 PF01713 Smr domain GJD98_RS11875 PF00488 MutS domain V GJD98_RS11880 PF00581 Rhodanese-like domain GJD98_RS11885 PF00462 Glutaredoxin GJD98_RS11890 PF02556 Preprotein translocase subunit SecB GJD98_RS11895 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus GJD98_RS11895 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus GJD98_RS11900 PF01177 Asp/Glu/Hydantoin racemase GJD98_RS11925 PF00701 Dihydrodipicolinate synthetase family GJD98_RS11945 PF01618 MotA/TolQ/ExbB proton channel family GJD98_RS11950 PF13677 Membrane MotB of proton-channel complex MotA/MotB GJD98_RS11950 PF00691 OmpA family GJD98_RS11970 PF00437 Type II/IV secretion system protein GJD98_RS11985 PF18073 Rubredoxin metal binding domain GJD98_RS12000 PF02609 Exonuclease VII small subunit GJD98_RS12005 PF00348 Polyprenyl synthetase GJD98_RS12010 PF08241 Methyltransferase domain GJD98_RS12015 PF00156 Phosphoribosyl transferase domain GJD98_RS12020 PF13180 PDZ domain GJD98_RS12020 PF02163 Peptidase family M50 GJD98_RS12020 PF17820 PDZ domain GJD98_RS12030 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain GJD98_RS12030 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain GJD98_RS12030 PF01488 Shikimate / quinate 5-dehydrogenase GJD98_RS12035 PF03462 PCRF domain GJD98_RS12035 PF00472 RF-1 domain GJD98_RS12040 PF13847 Methyltransferase domain GJD98_RS12040 PF17827 PrmC N-terminal domain GJD98_RS12045 PF01258 Prokaryotic dksA/traR C4-type zinc finger GJD98_RS12055 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) GJD98_RS12060 PF00226 DnaJ domain GJD98_RS12060 PF05099 Tellurite resistance protein TerB GJD98_RS12070 PF00657 GDSL-like Lipase/Acylhydrolase GJD98_RS12085 PF00271 Helicase conserved C-terminal domain GJD98_RS12085 PF00270 DEAD/DEAH box helicase GJD98_RS12085 PF03880 DbpA RNA binding domain GJD98_RS12090 PF00781 Diacylglycerol kinase catalytic domain GJD98_RS12095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GJD98_RS12095 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJD98_RS12100 PF00080 Copper/zinc superoxide dismutase (SODC) GJD98_RS12105 PF02627 Carboxymuconolactone decarboxylase family GJD98_RS12110 PF00578 AhpC/TSA family GJD98_RS12120 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain GJD98_RS12120 PF00056 lactate/malate dehydrogenase, NAD binding domain GJD98_RS12125 PF00293 NUDIX domain GJD98_RS12130 PF06969 HemN C-terminal domain GJD98_RS12130 PF04055 Radical SAM superfamily GJD98_RS12135 PF01425 Amidase GJD98_RS12140 PF02660 Glycerol-3-phosphate acyltransferase GJD98_RS12145 PF00814 Glycoprotease family GJD98_RS12150 PF01165 Ribosomal protein S21 GJD98_RS12160 PF01807 CHC2 zinc finger GJD98_RS12160 PF10410 DnaB-helicase binding domain of primase GJD98_RS12160 PF08275 DNA primase catalytic core, N-terminal domain GJD98_RS12160 PF13662 Toprim domain GJD98_RS12160 PF08278 DNA primase DnaG DnaB-binding GJD98_RS12165 PF03979 Sigma-70 factor, region 1.1 GJD98_RS12165 PF00140 Sigma-70 factor, region 1.2 GJD98_RS12165 PF04546 Sigma-70, non-essential region GJD98_RS12165 PF04539 Sigma-70 region 3 GJD98_RS12165 PF04542 Sigma-70 region 2 GJD98_RS12165 PF04545 Sigma-70, region 4 GJD98_RS12175 PF01610 Transposase GJD98_RS12175 PF13542 Helix-turn-helix domain of transposase family ISL3 GJD98_RS12175 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 GJD98_RS12210 PF13657 HipA N-terminal domain GJD98_RS12215 PF07804 HipA-like C-terminal domain GJD98_RS12260 PF03466 LysR substrate binding domain GJD98_RS12260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJD98_RS12280 PF00689 Cation transporting ATPase, C-terminus GJD98_RS12280 PF00690 Cation transporter/ATPase, N-terminus GJD98_RS12290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJD98_RS12290 PF03466 LysR substrate binding domain GJD98_RS12295 PF02705 K+ potassium transporter GJD98_RS12315 PF01278 Omptin family GJD98_RS12320 PF13520 Amino acid permease GJD98_RS12325 PF00141 Peroxidase GJD98_RS12330 PF00083 Sugar (and other) transporter GJD98_RS12330 PF08946 Osmosensory transporter coiled coil GJD98_RS12360 PF13847 Methyltransferase domain GJD98_RS12395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family GJD98_RS12395 PF03466 LysR substrate binding domain GJD98_RS12445 PF00144 Beta-lactamase GJD98_RS12480 PF00144 Beta-lactamase GJD98_RS12515 PF16957 Malonate decarboxylase, alpha subunit, transporter GJD98_RS12520 PF01039 Carboxyl transferase domain GJD98_RS12535 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase GJD98_RS12580 PF07690 Major Facilitator Superfamily GJD98_RS12585 PF03358 NADPH-dependent FMN reductase GJD98_RS12590 PF13409 Glutathione S-transferase, N-terminal domain GJD98_RS12635 PF01427 D-ala-D-ala dipeptidase GJD98_RS12680 PF00072 Response regulator receiver domain GJD98_RS12685 PF00360 Phytochrome region GJD98_RS12685 PF00512 His Kinase A (phospho-acceptor) domain GJD98_RS12685 PF01590 GAF domain GJD98_RS12685 PF08446 PAS fold GJD98_RS12685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS12715 PF14860 DrrA phosphatidylinositol 4-phosphate binding domain GJD98_RS12730 PF00374 Nickel-dependent hydrogenase GJD98_RS12740 PF00111 2Fe-2S iron-sulfur cluster binding domain GJD98_RS12740 PF00970 Oxidoreductase FAD-binding domain GJD98_RS12740 PF00175 Oxidoreductase NAD-binding domain GJD98_RS12750 PF02769 AIR synthase related protein, C-terminal domain GJD98_RS12750 PF00586 AIR synthase related protein, N-terminal domain GJD98_RS12755 PF01924 Hydrogenase formation hypA family GJD98_RS12760 PF01455 HupF/HypC family GJD98_RS12765 PF01300 Telomere recombination GJD98_RS12765 PF07503 HypF finger GJD98_RS12765 PF00708 Acylphosphatase GJD98_RS12765 PF17788 HypF Kae1-like domain GJD98_RS12770 PF02492 CobW/HypB/UreG, nucleotide-binding domain GJD98_RS12775 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA GJD98_RS12785 PF00535 Glycosyl transferase family 2 GJD98_RS12800 PF00892 EamA-like transporter family GJD98_RS12810 PF02627 Carboxymuconolactone decarboxylase family GJD98_RS12815 PF01725 Ham1 family GJD98_RS12825 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GJD98_RS12825 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GJD98_RS12825 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GJD98_RS12825 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GJD98_RS12830 PF00692 dUTPase GJD98_RS12835 PF04127 DNA / pantothenate metabolism flavoprotein GJD98_RS12835 PF02441 Flavoprotein GJD98_RS12840 PF04002 RadC-like JAB domain GJD98_RS12860 PF08240 Alcohol dehydrogenase GroES-like domain GJD98_RS12865 PF00011 Hsp20/alpha crystallin family GJD98_RS12875 PF03435 Saccharopine dehydrogenase NADP binding domain GJD98_RS12875 PF16653 Saccharopine dehydrogenase C-terminal domain GJD98_RS12880 PF00588 SpoU rRNA Methylase family GJD98_RS12890 PF04193 PQ loop repeat GJD98_RS12905 PF03641 Possible lysine decarboxylase GJD98_RS12910 PF00484 Carbonic anhydrase GJD98_RS12915 PF07690 Major Facilitator Superfamily GJD98_RS12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS12940 PF00072 Response regulator receiver domain GJD98_RS12955 PF12252 Dot/Icm substrate protein GJD98_RS12970 PF00873 AcrB/AcrD/AcrF family GJD98_RS12975 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion GJD98_RS12975 PF00529 HlyD membrane-fusion protein of T1SS GJD98_RS12980 PF02321 Outer membrane efflux protein GJD98_RS12985 PF01784 NIF3 (NGG1p interacting factor 3) GJD98_RS12995 PF01037 Lrp/AsnC ligand binding domain GJD98_RS13020 PF01168 Alanine racemase, N-terminal domain GJD98_RS13020 PF14031 Putative serine dehydratase domain GJD98_RS13065 PF00793 DAHP synthetase I family GJD98_RS13080 PF00155 Aminotransferase class I and II GJD98_RS13085 PF09313 Domain of unknown function (DUF1971) GJD98_RS13085 PF03848 Tellurite resistance protein TehB GJD98_RS13090 PF02082 Transcriptional regulator GJD98_RS13095 PF01152 Bacterial-like globin GJD98_RS13100 PF00970 Oxidoreductase FAD-binding domain GJD98_RS13100 PF00175 Oxidoreductase NAD-binding domain GJD98_RS13100 PF00111 2Fe-2S iron-sulfur cluster binding domain GJD98_RS13120 PF01741 Large-conductance mechanosensitive channel, MscL GJD98_RS13155 PF01588 Putative tRNA binding domain GJD98_RS13185 PF07690 Major Facilitator Superfamily GJD98_RS13190 PF05036 Sporulation related domain GJD98_RS13190 PF03330 Lytic transglycolase GJD98_RS13200 PF00069 Protein kinase domain GJD98_RS13265 PF02796 Helix-turn-helix domain of resolvase GJD98_RS13265 PF00239 Resolvase, N terminal domain GJD98_RS13280 PF02796 Helix-turn-helix domain of resolvase GJD98_RS13280 PF00239 Resolvase, N terminal domain GJD98_RS13295 PF04343 Protein of unknown function, DUF488 GJD98_RS13320 PF00441 Acyl-CoA dehydrogenase, C-terminal domain GJD98_RS13320 PF02770 Acyl-CoA dehydrogenase, middle domain GJD98_RS13320 PF02771 Acyl-CoA dehydrogenase, N-terminal domain GJD98_RS13325 PF02780 Transketolase, C-terminal domain GJD98_RS13325 PF02779 Transketolase, pyrimidine binding domain GJD98_RS13350 PF01427 D-ala-D-ala dipeptidase GJD98_RS13370 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family GJD98_RS13375 PF17762 HTH domain found in ParB protein GJD98_RS13375 PF02195 ParB-like nuclease domain GJD98_RS13390 PF01029 NusB family GJD98_RS13390 PF01189 16S rRNA methyltransferase RsmB/F GJD98_RS13395 PF02911 Formyl transferase, C-terminal domain GJD98_RS13395 PF00551 Formyl transferase GJD98_RS13400 PF01327 Polypeptide deformylase GJD98_RS13410 PF02481 DNA recombination-mediator protein A GJD98_RS13410 PF17782 DprA winged helix domain GJD98_RS13420 PF13368 Topoisomerase C-terminal repeat GJD98_RS13420 PF01751 Toprim domain GJD98_RS13420 PF01131 DNA topoisomerase GJD98_RS13425 PF01757 Acyltransferase family GJD98_RS13445 PF12146 Serine aminopeptidase, S33 GJD98_RS13460 PF01431 Peptidase family M13 GJD98_RS13460 PF05649 Peptidase family M13 GJD98_RS13465 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase GJD98_RS13470 PF00091 Tubulin/FtsZ family, GTPase domain GJD98_RS13470 PF12327 FtsZ family, C-terminal domain GJD98_RS13475 PF02491 SHS2 domain inserted in FTSA GJD98_RS13480 PF08478 POTRA domain, FtsQ-type GJD98_RS13480 PF03799 Cell division protein FtsQ GJD98_RS13485 PF01820 D-ala D-ala ligase N-terminus GJD98_RS13485 PF07478 D-ala D-ala ligase C-terminus GJD98_RS13490 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain GJD98_RS13490 PF01565 FAD binding domain GJD98_RS13495 PF01225 Mur ligase family, catalytic domain GJD98_RS13495 PF02875 Mur ligase family, glutamate ligase domain GJD98_RS13495 PF08245 Mur ligase middle domain GJD98_RS13500 PF01098 Cell cycle protein GJD98_RS13505 PF02875 Mur ligase family, glutamate ligase domain GJD98_RS13505 PF08245 Mur ligase middle domain GJD98_RS13510 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 GJD98_RS13510 PF00953 Glycosyl transferase family 4 GJD98_RS13515 PF08245 Mur ligase middle domain GJD98_RS13515 PF01225 Mur ligase family, catalytic domain GJD98_RS13515 PF02875 Mur ligase family, glutamate ligase domain GJD98_RS13520 PF04354 ZipA, C-terminal FtsZ-binding domain GJD98_RS13525 PF02463 RecF/RecN/SMC N terminal domain GJD98_RS13525 PF06470 SMC proteins Flexible Hinge Domain GJD98_RS13545 PF03449 Transcription elongation factor, N-terminal GJD98_RS13545 PF01272 Transcription elongation factor, GreA/GreB, C-term GJD98_RS13550 PF02142 MGS-like domain GJD98_RS13550 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain GJD98_RS13550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GJD98_RS13570 PF03739 Lipopolysaccharide export system permease LptF/LptG GJD98_RS13575 PF03739 Lipopolysaccharide export system permease LptF/LptG GJD98_RS13580 PF00883 Cytosol aminopeptidase family, catalytic domain GJD98_RS13580 PF02789 Cytosol aminopeptidase family, N-terminal domain GJD98_RS13585 PF04364 DNA polymerase III chi subunit, HolC GJD98_RS13595 PF02789 Cytosol aminopeptidase family, N-terminal domain GJD98_RS13595 PF00883 Cytosol aminopeptidase family, catalytic domain GJD98_RS13600 PF03023 Lipid II flippase MurJ GJD98_RS13605 PF01649 Ribosomal protein S20 GJD98_RS13630 PF03734 L,D-transpeptidase catalytic domain GJD98_RS13635 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS13635 PF03707 Bacterial signalling protein N terminal repeat GJD98_RS13635 PF00563 EAL domain GJD98_RS13650 PF02151 UvrB/uvrC motif GJD98_RS13650 PF08459 UvrC Helix-hairpin-helix N-terminal GJD98_RS13650 PF01541 GIY-YIG catalytic domain GJD98_RS13655 PF00196 Bacterial regulatory proteins, luxR family GJD98_RS13655 PF00072 Response regulator receiver domain GJD98_RS13660 PF00351 Biopterin-dependent aromatic amino acid hydroxylase GJD98_RS13665 PF18146 Damage-inducible protein CinA KH domain GJD98_RS13665 PF02464 Competence-damaged protein GJD98_RS13665 PF00994 Probable molybdopterin binding domain GJD98_RS13670 PF01018 GTP1/OBG GJD98_RS13670 PF01926 50S ribosome-binding GTPase GJD98_RS13675 PF01016 Ribosomal L27 protein GJD98_RS13680 PF00829 Ribosomal prokaryotic L21 protein GJD98_RS13685 PF01386 Ribosomal L25p family GJD98_RS13685 PF14693 Ribosomal protein TL5, C-terminal domain GJD98_RS13690 PF01195 Peptidyl-tRNA hydrolase GJD98_RS13695 PF01926 50S ribosome-binding GTPase GJD98_RS13695 PF06071 Protein of unknown function (DUF933) GJD98_RS13700 PF00563 EAL domain GJD98_RS13700 PF00990 Diguanylate cyclase, GGDEF domain GJD98_RS13700 PF03707 Bacterial signalling protein N terminal repeat GJD98_RS13705 PF00348 Polyprenyl synthetase GJD98_RS13715 PF02421 Ferrous iron transport protein B GJD98_RS13715 PF07670 Nucleoside recognition GJD98_RS13715 PF07664 Ferrous iron transport protein B C terminus GJD98_RS13725 PF03969 AFG1-like ATPase GJD98_RS13735 PF02548 Ketopantoate hydroxymethyltransferase GJD98_RS13740 PF02569 Pantoate-beta-alanine ligase GJD98_RS13750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GJD98_RS13750 PF00289 Biotin carboxylase, N-terminal domain GJD98_RS13750 PF02785 Biotin carboxylase C-terminal domain GJD98_RS13765 PF04545 Sigma-70, region 4 GJD98_RS13765 PF00140 Sigma-70 factor, region 1.2 GJD98_RS13765 PF04542 Sigma-70 region 2 GJD98_RS13770 PF18075 FtsX extracellular domain GJD98_RS13775 PF00005 ABC transporter GJD98_RS13780 PF02881 SRP54-type protein, helical bundle domain GJD98_RS13780 PF00448 SRP54-type protein, GTPase domain GJD98_RS13785 PF05193 Peptidase M16 inactive domain GJD98_RS13785 PF00675 Insulinase (Peptidase family M16) GJD98_RS13790 PF05193 Peptidase M16 inactive domain GJD98_RS13810 PF00437 Type II/IV secretion system protein GJD98_RS13815 PF00746 LPXTG cell wall anchor motif GJD98_RS13815 PF02872 5'-nucleotidase, C-terminal domain GJD98_RS13815 PF00565 Staphylococcal nuclease homologue GJD98_RS13815 PF00149 Calcineurin-like phosphoesterase GJD98_RS13820 PF01209 ubiE/COQ5 methyltransferase family GJD98_RS13825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain GJD98_RS13825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GJD98_RS13830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain GJD98_RS13830 PF02875 Mur ligase family, glutamate ligase domain GJD98_RS13830 PF08245 Mur ligase middle domain GJD98_RS13835 PF07836 DmpG-like communication domain GJD98_RS13835 PF00682 HMGL-like GJD98_RS13845 PF00180 Isocitrate/isopropylmalate dehydrogenase GJD98_RS13845 PF03737 Aldolase/RraA GJD98_RS13885 PF00403 Heavy-metal-associated domain GJD98_RS13895 PF01209 ubiE/COQ5 methyltransferase family GJD98_RS13905 PF01075 Glycosyltransferase family 9 (heptosyltransferase) GJD98_RS13920 PF08676 MutL C terminal dimerisation domain GJD98_RS13920 PF01119 DNA mismatch repair protein, C-terminal domain GJD98_RS13925 PF01520 N-acetylmuramoyl-L-alanine amidase GJD98_RS13930 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE GJD98_RS13935 PF01256 Carbohydrate kinase GJD98_RS13935 PF03853 YjeF-related protein N-terminus GJD98_RS13940 PF04386 Stringent starvation protein B GJD98_RS13945 PF00043 Glutathione S-transferase, C-terminal domain GJD98_RS13945 PF02798 Glutathione S-transferase, N-terminal domain GJD98_RS13950 PF02167 Cytochrome C1 family GJD98_RS13955 PF00033 Cytochrome b/b6/petB GJD98_RS13955 PF00032 Cytochrome b(C-terminal)/b6/petD GJD98_RS13960 PF00355 Rieske [2Fe-2S] domain GJD98_RS13960 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal GJD98_RS13965 PF00380 Ribosomal protein S9/S16 GJD98_RS13970 PF00572 Ribosomal protein L13 GJD98_RS13980 PF00216 Bacterial DNA-binding protein GJD98_RS13985 PF03483 B3/4 domain GJD98_RS13985 PF01588 Putative tRNA binding domain GJD98_RS13985 PF03484 tRNA synthetase B5 domain GJD98_RS13985 PF03147 Ferredoxin-fold anticodon binding domain GJD98_RS13985 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain GJD98_RS13990 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain GJD98_RS13990 PF01409 tRNA synthetases class II core domain (F) GJD98_RS13995 PF00453 Ribosomal protein L20 GJD98_RS14000 PF01632 Ribosomal protein L35 GJD98_RS14005 PF00707 Translation initiation factor IF-3, C-terminal domain GJD98_RS14005 PF05198 Translation initiation factor IF-3, N-terminal domain GJD98_RS14010 PF02824 TGS domain GJD98_RS14010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain GJD98_RS14010 PF03129 Anticodon binding domain GJD98_RS14010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) GJD98_RS14020 PF02594 Uncharacterised ACR, YggU family COG1872 GJD98_RS14035 PF04107 Glutamate-cysteine ligase family 2(GCS2) GJD98_RS14050 PF07992 Pyridine nucleotide-disulphide oxidoreductase GJD98_RS14050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family GJD98_RS14065 PF03458 UPF0126 domain GJD98_RS14070 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD GJD98_RS14075 PF01702 Queuine tRNA-ribosyltransferase GJD98_RS14080 PF02600 Disulfide bond formation protein DsbB GJD98_RS14085 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GJD98_RS14090 PF00155 Aminotransferase class I and II GJD98_RS14095 PF00072 Response regulator receiver domain GJD98_RS14105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase GJD98_RS14105 PF00072 Response regulator receiver domain GJD98_RS14110 PF03900 Porphobilinogen deaminase, C-terminal domain GJD98_RS14110 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain GJD98_RS14115 PF02602 Uroporphyrinogen-III synthase HemD GJD98_RS14130 PF01545 Cation efflux family GJD98_RS14135 PF02677 Epoxyqueuosine reductase QueH GJD98_RS14140 PF00929 Exonuclease GJD98_RS14145 PF01966 HD domain GJD98_RS14145 PF01743 Poly A polymerase head domain GJD98_RS14145 PF12627 Probable RNA and SrmB- binding site of polymerase A GJD98_RS14150 PF03193 RsgA GTPase GJD98_RS14190 PF12170 DNA polymerase III tau subunit V interacting with alpha GJD98_RS14190 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding GJD98_RS14190 PF12169 DNA polymerase III subunits gamma and tau domain III GJD98_RS14195 PF02575 YbaB/EbfC DNA-binding family GJD98_RS14200 PF02132 RecR protein GJD98_RS14200 PF13662 Toprim domain GJD98_RS14220 PF00486 Transcriptional regulatory protein, C terminal GJD98_RS14220 PF00072 Response regulator receiver domain GJD98_RS14235 PF01595 Cyclin M transmembrane N-terminal domain GJD98_RS14235 PF00571 CBS domain GJD98_RS14235 PF03471 Transporter associated domain GJD98_RS14240 PF00719 Inorganic pyrophosphatase GJD98_RS14245 PF01230 HIT domain GJD98_RS14250 PF01227 GTP cyclohydrolase I GJD98_RS14255 PF07995 Glucose / Sorbosone dehydrogenase GJD98_RS14260 PF00013 KH domain GJD98_RS14260 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain GJD98_RS14260 PF03725 3' exoribonuclease family, domain 2 GJD98_RS14260 PF00575 S1 RNA binding domain GJD98_RS14260 PF01138 3' exoribonuclease family, domain 1 GJD98_RS14265 PF00312 Ribosomal protein S15 GJD98_RS14270 PF09157 Pseudouridine synthase II TruB, C-terminal GJD98_RS14270 PF16198 tRNA pseudouridylate synthase B C-terminal domain GJD98_RS14270 PF01509 TruB family pseudouridylate synthase (N terminal domain) GJD98_RS14275 PF02033 Ribosome-binding factor A GJD98_RS14280 PF11987 Translation-initiation factor 2 GJD98_RS14280 PF08364 Bacterial translation initiation factor IF-2 associated region GJD98_RS14280 PF00009 Elongation factor Tu GTP binding domain GJD98_RS14280 PF04760 Translation initiation factor IF-2, N-terminal region GJD98_RS14285 PF13184 NusA-like KH domain GJD98_RS14285 PF08529 NusA N-terminal domain GJD98_RS14290 PF02576 RimP N-terminal domain GJD98_RS14290 PF17384 RimP C-terminal SH3 domain GJD98_RS14300 PF00361 Proton-conducting membrane transporter GJD98_RS14305 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus GJD98_RS14305 PF00361 Proton-conducting membrane transporter GJD98_RS14310 PF00361 Proton-conducting membrane transporter GJD98_RS14310 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus GJD98_RS14315 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L GJD98_RS14320 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 GJD98_RS14325 PF12838 4Fe-4S dicluster domain GJD98_RS14330 PF00146 NADH dehydrogenase GJD98_RS14335 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal GJD98_RS14335 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region GJD98_RS14335 PF00384 Molybdopterin oxidoreductase GJD98_RS14340 PF10531 SLBB domain GJD98_RS14340 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region GJD98_RS14340 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit GJD98_RS14350 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit GJD98_RS14355 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit GJD98_RS14360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit GJD98_RS14365 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 GJD98_RS14375 PF03840 Preprotein translocase SecG subunit GJD98_RS14380 PF00121 Triosephosphate isomerase GJD98_RS14390 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain GJD98_RS14390 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II GJD98_RS14390 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I GJD98_RS14390 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III GJD98_RS14395 PF00809 Pterin binding enzyme GJD98_RS14400 PF06480 FtsH Extracellular GJD98_RS14400 PF17862 AAA+ lid domain GJD98_RS14400 PF00004 ATPase family associated with various cellular activities (AAA) GJD98_RS14400 PF01434 Peptidase family M41 GJD98_RS14405 PF01728 FtsJ-like methyltransferase GJD98_RS14410 PF01985 CRS1 / YhbY (CRM) domain GJD98_RS14415 PF01757 Acyltransferase family GJD98_RS14425 PF01066 CDP-alcohol phosphatidyltransferase GJD98_RS14430 PF00308 Bacterial dnaA protein GJD98_RS14445 PF00854 POT family GJD98_RS14460 PF01488 Shikimate / quinate 5-dehydrogenase GJD98_RS14460 PF18317 Shikimate 5'-dehydrogenase C-terminal domain GJD98_RS14460 PF08501 Shikimate dehydrogenase substrate binding domain GJD98_RS14465 PF17432 Domain of unknown function (DUF3458_C) ARM repeats GJD98_RS14465 PF01433 Peptidase family M1 domain GJD98_RS14465 PF11940 Domain of unknown function (DUF3458) Ig-like fold GJD98_RS14470 PF08298 PrkA AAA domain GJD98_RS14470 PF06798 PrkA serine protein kinase C-terminal domain GJD98_RS14475 PF04285 Protein of unknown function (DUF444) GJD98_RS14480 PF04293 SpoVR like protein GJD98_RS14490 PF04389 Peptidase family M28 GJD98_RS14490 PF02225 PA domain GJD98_RS14500 PF00580 UvrD/REP helicase N-terminal domain GJD98_RS14500 PF13361 UvrD-like helicase C-terminal domain GJD98_RS14505 PF01430 Hsp33 protein GJD98_RS14520 PF00248 Aldo/keto reductase family GJD98_RS14525 PF03853 YjeF-related protein N-terminus GJD98_RS14530 PF00009 Elongation factor Tu GTP binding domain GJD98_RS14530 PF03144 Elongation factor Tu domain 2 GJD98_RS14530 PF00679 Elongation factor G C-terminus GJD98_RS14535 PF01513 ATP-NAD kinase GJD98_RS14540 PF02463 RecF/RecN/SMC N terminal domain GJD98_RS14545 PF00313 'Cold-shock' DNA-binding domain GJD98_RS14550 PF07722 Peptidase C26 GJD98_RS14550 PF12796 Ankyrin repeats (3 copies) GJD98_RS14570 PF04564 U-box domain GJD98_RS14575 PF01734 Patatin-like phospholipase GJD98_RS14575 PF00027 Cyclic nucleotide-binding domain GJD98_RS14585 PF03061 Thioesterase superfamily GJD98_RS14590 PF17674 HHH domain GJD98_RS14590 PF00575 S1 RNA binding domain GJD98_RS14590 PF09371 Tex-like protein N-terminal domain GJD98_RS14590 PF16921 Tex protein YqgF-like domain GJD98_RS14595 PF05724 Thiopurine S-methyltransferase (TPMT) GJD98_RS14600 PF01380 SIS domain GJD98_RS14610 PF00581 Rhodanese-like domain GJD98_RS14610 PF17773 UPF0176 acylphosphatase like domain GJD98_RS14615 PF01668 SmpB protein GJD98_RS14620 PF00578 AhpC/TSA family GJD98_RS14625 PF07690 Major Facilitator Superfamily GJD98_RS14630 PF13638 PIN domain GJD98_RS14630 PF02562 PhoH-like protein GJD98_RS14635 PF00478 IMP dehydrogenase / GMP reductase domain GJD98_RS14670 PF00313 'Cold-shock' DNA-binding domain GJD98_RS14680 PF01425 Amidase GJD98_RS14700 PF07584 Aerotolerance regulator N-terminal GJD98_RS14700 PF00092 von Willebrand factor type A domain GJD98_RS14710 PF01882 Protein of unknown function DUF58 GJD98_RS14715 PF17863 AAA lid domain GJD98_RS14715 PF07726 ATPase family associated with various cellular activities (AAA) GJD98_RS14725 PF01207 Dihydrouridine synthase (Dus) GJD98_RS14750 PF00271 Helicase conserved C-terminal domain GJD98_RS14750 PF17764 3′ DNA-binding domain (3′BD) GJD98_RS14750 PF18074 Primosomal protein N C-terminal domain GJD98_RS14750 PF00270 DEAD/DEAH box helicase GJD98_RS14750 PF18319 PriA DNA helicase Cys-rich region (CRR) domain GJD98_RS14765 PF00303 Thymidylate synthase GJD98_RS14770 PF01790 Prolipoprotein diacylglyceryl transferase GJD98_RS14775 PF01925 Sulfite exporter TauE/SafE GJD98_RS14780 PF02896 PEP-utilising enzyme, TIM barrel domain GJD98_RS14780 PF00391 PEP-utilising enzyme, mobile domain GJD98_RS14780 PF05524 PEP-utilising enzyme, N-terminal GJD98_RS14780 PF01590 GAF domain GJD98_RS14785 PF00293 NUDIX domain GJD98_RS14790 PF17763 Glutaminase/Asparaginase C-terminal domain GJD98_RS14790 PF00710 Asparaginase, N-terminal GJD98_RS14800 PF00132 Bacterial transferase hexapeptide (six repeats) GJD98_RS14800 PF12804 MobA-like NTP transferase domain GJD98_RS14805 PF03600 Citrate transporter GJD98_RS14815 PF01544 CorA-like Mg2+ transporter protein GJD98_RS14825 PF00633 Helix-hairpin-helix motif GJD98_RS14825 PF10576 Iron-sulfur binding domain of endonuclease III GJD98_RS14825 PF00730 HhH-GPD superfamily base excision DNA repair protein GJD98_RS14830 PF04060 Putative Fe-S cluster GJD98_RS14835 PF09334 tRNA synthetases class I (M) GJD98_RS14835 PF01588 Putative tRNA binding domain GJD98_RS14840 PF02441 Flavoprotein GJD98_RS14855 PF06508 Queuosine biosynthesis protein QueC GJD98_RS14860 PF00483 Nucleotidyl transferase GJD98_RS14860 PF01050 Mannose-6-phosphate isomerase GJD98_RS14870 PF01134 Glucose inhibited division protein A GJD98_RS14870 PF13932 GidA associated domain GJD98_RS14875 PF02527 rRNA small subunit methyltransferase G GJD98_RS14880 PF13614 AAA domain GJD98_RS14885 PF02195 ParB-like nuclease domain GJD98_RS14885 PF17762 HTH domain found in ParB protein GJD98_RS14890 PF04480 Protein of unknown function (DUF559) GJD98_RS14895 PF13340 Putative transposase of IS4/5 family (DUF4096) GJD98_RS14910 PF00117 Glutamine amidotransferase class-I GJD98_RS14910 PF03352 Methyladenine glycosylase GJD98_RS14910 PF13673 Acetyltransferase (GNAT) domain GJD98_RS14910 PF00958 GMP synthase C terminal domain GJD98_RS14910 PF13302 Acetyltransferase (GNAT) domain GJD98_RS14920 PF00510 Cytochrome c oxidase subunit III GJD98_RS14925 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 GJD98_RS14930 PF00115 Cytochrome C and Quinol oxidase polypeptide I GJD98_RS14935 PF00116 Cytochrome C oxidase subunit II, periplasmic domain GJD98_RS14935 PF02790 Cytochrome C oxidase subunit II, transmembrane domain GJD98_RS14940 PF00034 Cytochrome c GJD98_RS14940 PF13442 Cytochrome C oxidase, cbb3-type, subunit III GJD98_RS14950 PF00534 Glycosyl transferases group 1 GJD98_RS14950 PF13439 Glycosyltransferase Family 4 GJD98_RS14955 PF01810 LysE type translocator GJD98_RS14965 PF01209 ubiE/COQ5 methyltransferase family GJD98_RS14975 PF03109 ABC1 family GJD98_RS14980 PF02416 mttA/Hcf106 family GJD98_RS15000 PF01641 SelR domain GJD98_RS15000 PF01625 Peptide methionine sulfoxide reductase GJD98_RS15010 PF01179 Copper amine oxidase, enzyme domain GJD98_RS15010 PF02728 Copper amine oxidase, N3 domain GJD98_RS15070 PF00144 Beta-lactamase GJD98_RS15085 PF00005 ABC transporter GJD98_RS15085 PF02687 FtsX-like permease family GJD98_RS15085 PF12704 MacB-like periplasmic core domain GJD98_RS15090 PF02687 FtsX-like permease family GJD98_RS15090 PF00005 ABC transporter GJD98_RS15090 PF12704 MacB-like periplasmic core domain GJD98_RS15105 PF00149 Calcineurin-like phosphoesterase GJD98_RS15115 PF00398 Ribosomal RNA adenine dimethylase GJD98_RS15120 PF02261 Aspartate decarboxylase GJD98_RS15125 PF00902 Sec-independent protein translocase protein (TatC) GJD98_RS15140 PF00970 Oxidoreductase FAD-binding domain GJD98_RS15140 PF00175 Oxidoreductase NAD-binding domain GJD98_RS15140 PF00111 2Fe-2S iron-sulfur cluster binding domain GJD98_RS15145 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase GJD98_RS15150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GJD98_RS15150 PF07497 Rho termination factor, RNA-binding domain GJD98_RS15150 PF07498 Rho termination factor, N-terminal domain GJD98_RS15155 PF00085 Thioredoxin GJD98_RS15160 PF04452 RNA methyltransferase GJD98_RS15165 PF10415 Fumarase C C-terminus GJD98_RS15165 PF00206 Lyase GJD98_RS15180 PF03279 Bacterial lipid A biosynthesis acyltransferase GJD98_RS15195 PF00132 Bacterial transferase hexapeptide (six repeats) GJD98_RS15195 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 GJD98_RS15200 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD GJD98_RS15200 PF00132 Bacterial transferase hexapeptide (six repeats) GJD98_RS15200 PF14602 Hexapeptide repeat of succinyl-transferase GJD98_RS15205 PF02684 Lipid-A-disaccharide synthetase GJD98_RS15215 PF00664 ABC transporter transmembrane region GJD98_RS15215 PF00005 ABC transporter GJD98_RS15250 PF00291 Pyridoxal-phosphate dependent enzyme GJD98_RS15250 PF00571 CBS domain GJD98_RS15270 PF00216 Bacterial DNA-binding protein GJD98_RS15275 PF00692 dUTPase GJD98_RS15280 PF16200 C-terminal region of band_7 GJD98_RS15280 PF01145 SPFH domain / Band 7 family GJD98_RS15310 PF00691 OmpA family GJD98_RS15310 PF01389 OmpA-like transmembrane domain GJD98_RS15315 PF01979 Amidohydrolase family GJD98_RS15320 PF00929 Exonuclease GJD98_RS15325 PF00578 AhpC/TSA family GJD98_RS15325 PF10417 C-terminal domain of 1-Cys peroxiredoxin GJD98_RS15330 PF00462 Glutaredoxin GJD98_RS15335 PF02777 Iron/manganese superoxide dismutases, C-terminal domain GJD98_RS15335 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain GJD98_RS15340 PF00202 Aminotransferase class-III GJD98_RS15345 PF00753 Metallo-beta-lactamase superfamily GJD98_RS15355 PF00390 Malic enzyme, N-terminal domain GJD98_RS15355 PF03949 Malic enzyme, NAD binding domain GJD98_RS15360 PF01300 Telomere recombination GJD98_RS15370 PF02666 Phosphatidylserine decarboxylase GJD98_RS15395 PF03989 DNA gyrase C-terminal domain, beta-propeller GJD98_RS15395 PF00521 DNA gyrase/topoisomerase IV, subunit A GJD98_RS15400 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain GJD98_RS15400 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain GJD98_RS15405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GJD98_RS15405 PF02874 ATP synthase alpha/beta family, beta-barrel domain GJD98_RS15410 PF00231 ATP synthase GJD98_RS15415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain GJD98_RS15415 PF00306 ATP synthase alpha/beta chain, C terminal domain GJD98_RS15415 PF02874 ATP synthase alpha/beta family, beta-barrel domain GJD98_RS15420 PF00213 ATP synthase delta (OSCP) subunit GJD98_RS15425 PF00430 ATP synthase B/B' CF(0) GJD98_RS15430 PF00137 ATP synthase subunit C GJD98_RS15435 PF00119 ATP synthase A chain GJD98_RS15440 PF03899 ATP synthase I chain GJD98_RS15450 PF04972 BON domain GJD98_RS15455 PF04972 BON domain GJD98_RS15460 PF13580 SIS domain GJD98_RS15465 PF02021 Uncharacterised protein family UPF0102 GJD98_RS15470 PF04348 LppC putative lipoprotein GJD98_RS15475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases GJD98_RS15480 PF00487 Fatty acid desaturase GJD98_RS15500 PF10396 GTP-binding protein TrmE N-terminus GJD98_RS15500 PF12631 MnmE helical domain GJD98_RS15500 PF01926 50S ribosome-binding GTPase GJD98_RS15505 PF14849 YidC periplasmic domain GJD98_RS15505 PF02096 60Kd inner membrane protein GJD98_RS15510 PF01809 Putative membrane protein insertion efficiency factor GJD98_RS15515 PF00825 Ribonuclease P GJD98_RS15520 PF00468 Ribosomal protein L34