locus-tag class description CA940_RS00005 PF00308 Bacterial dnaA protein CA940_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CA940_RS00005 PF11638 DnaA N-terminal domain CA940_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CA940_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CA940_RS00010 PF02767 DNA polymerase III beta subunit, central domain CA940_RS00015 PF02463 RecF/RecN/SMC N terminal domain CA940_RS00020 PF01751 Toprim domain CA940_RS00020 PF00204 DNA gyrase B CA940_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus CA940_RS00020 PF18053 DNA gyrase B subunit insert domain CA940_RS00025 PF04371 Porphyromonas-type peptidyl-arginine deiminase CA940_RS00030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CA940_RS00030 PF17944 Arginine decarboxylase C-terminal helical extension CA940_RS00030 PF17810 Arginine decarboxylase helical bundle domain CA940_RS00050 PF17209 Hfq protein CA940_RS00055 PF01926 50S ribosome-binding GTPase CA940_RS00055 PF16360 GTP-binding GTPase Middle Region CA940_RS00055 PF13167 GTP-binding GTPase N-terminal CA940_RS00060 PF00578 AhpC/TSA family CA940_RS00070 PF02678 Pirin CA940_RS00070 PF05726 Pirin C-terminal cupin domain CA940_RS00080 PF00529 HlyD membrane-fusion protein of T1SS CA940_RS00080 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CA940_RS00100 PF04151 Bacterial pre-peptidase C-terminal domain CA940_RS00100 PF03413 Peptidase propeptide and YPEB domain CA940_RS00100 PF02868 Thermolysin metallopeptidase, alpha-helical domain CA940_RS00100 PF07504 Fungalysin/Thermolysin Propeptide Motif CA940_RS00100 PF01447 Thermolysin metallopeptidase, catalytic domain CA940_RS00110 PF04751 Protein of unknown function (DUF615) CA940_RS00115 PF10672 S-adenosylmethionine-dependent methyltransferase CA940_RS00115 PF01170 Putative RNA methylase family UPF0020 CA940_RS00130 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP CA940_RS00135 PF13520 Amino acid permease CA940_RS00140 PF01384 Phosphate transporter family CA940_RS00145 PF03232 Ubiquinone biosynthesis protein COQ7 CA940_RS00160 PF02225 PA domain CA940_RS00160 PF04389 Peptidase family M28 CA940_RS00170 PF02392 Ycf4 CA940_RS00185 PF00497 Bacterial extracellular solute-binding proteins, family 3 CA940_RS00215 PF01062 Bestrophin, RFP-TM, chloride channel CA940_RS00235 PF00132 Bacterial transferase hexapeptide (six repeats) CA940_RS00245 PF13520 Amino acid permease CA940_RS00275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA940_RS00275 PF03466 LysR substrate binding domain CA940_RS00325 PF00155 Aminotransferase class I and II CA940_RS00330 PF04851 Type III restriction enzyme, res subunit CA940_RS00330 PF00271 Helicase conserved C-terminal domain CA940_RS00330 PF17757 UvrB interaction domain CA940_RS00330 PF02151 UvrB/uvrC motif CA940_RS00330 PF12344 Ultra-violet resistance protein B CA940_RS00340 PF03707 Bacterial signalling protein N terminal repeat CA940_RS00340 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS00340 PF00563 EAL domain CA940_RS00345 PF01645 Conserved region in glutamate synthase CA940_RS00350 PF05164 Cell division protein ZapA CA940_RS00355 PF03695 Uncharacterised protein family (UPF0149) CA940_RS00360 PF00557 Metallopeptidase family M24 CA940_RS00360 PF05195 Aminopeptidase P, N-terminal domain CA940_RS00365 PF01494 FAD binding domain CA940_RS00370 PF01494 FAD binding domain CA940_RS00405 PF08443 RimK-like ATP-grasp domain CA940_RS00405 PF18030 RimK PreATP-grasp domain CA940_RS00425 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CA940_RS00440 PF17876 Cold shock domain CA940_RS00440 PF08206 Ribonuclease B OB domain CA940_RS00440 PF00575 S1 RNA binding domain CA940_RS00440 PF00773 RNB domain CA940_RS00440 PF08461 Ribonuclease R winged-helix domain CA940_RS00445 PF00588 SpoU rRNA Methylase family CA940_RS00445 PF08032 RNA 2'-O ribose methyltransferase substrate binding CA940_RS00450 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CA940_RS00470 PF03831 PhnA domain CA940_RS00470 PF08274 PhnA Zinc-Ribbon CA940_RS00480 PF00476 DNA polymerase family A CA940_RS00480 PF01612 3'-5' exonuclease CA940_RS00480 PF01367 5'-3' exonuclease, C-terminal SAM fold CA940_RS00480 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CA940_RS00485 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CA940_RS00485 PF00132 Bacterial transferase hexapeptide (six repeats) CA940_RS00495 PF00109 Beta-ketoacyl synthase, N-terminal domain CA940_RS00495 PF02801 Beta-ketoacyl synthase, C-terminal domain CA940_RS00505 PF01625 Peptide methionine sulfoxide reductase CA940_RS00515 PF00860 Permease family CA940_RS00545 PF00563 EAL domain CA940_RS00545 PF08668 HDOD domain CA940_RS00550 PF02347 Glycine cleavage system P-protein CA940_RS00560 PF02347 Glycine cleavage system P-protein CA940_RS00565 PF01597 Glycine cleavage H-protein CA940_RS00570 PF08669 Glycine cleavage T-protein C-terminal barrel domain CA940_RS00570 PF01571 Aminomethyltransferase folate-binding domain CA940_RS00590 PF00005 ABC transporter CA940_RS00595 PF01323 DSBA-like thioredoxin domain CA940_RS00600 PF00034 Cytochrome c CA940_RS00605 PF01926 50S ribosome-binding GTPase CA940_RS00615 PF00501 AMP-binding enzyme CA940_RS00615 PF16177 Acetyl-coenzyme A synthetase N-terminus CA940_RS00615 PF13193 AMP-binding enzyme C-terminal domain CA940_RS00620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CA940_RS00620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CA940_RS00625 PF00171 Aldehyde dehydrogenase family CA940_RS00630 PF07311 Dodecin CA940_RS00640 PF05173 Dihydrodipicolinate reductase, C-terminus CA940_RS00640 PF01113 Dihydrodipicolinate reductase, N-terminus CA940_RS00665 PF00224 Pyruvate kinase, barrel domain CA940_RS00665 PF02887 Pyruvate kinase, alpha/beta domain CA940_RS00670 PF00162 Phosphoglycerate kinase CA940_RS00675 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CA940_RS00675 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CA940_RS00680 PF02780 Transketolase, C-terminal domain CA940_RS00680 PF02779 Transketolase, pyrimidine binding domain CA940_RS00680 PF00456 Transketolase, thiamine diphosphate binding domain CA940_RS00690 PF01432 Peptidase family M3 CA940_RS00700 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CA940_RS00700 PF01610 Transposase CA940_RS00700 PF13542 Helix-turn-helix domain of transposase family ISL3 CA940_RS00705 PF01695 IstB-like ATP binding protein CA940_RS00710 PF02796 Helix-turn-helix domain of resolvase CA940_RS00710 PF00665 Integrase core domain CA940_RS00720 PF01609 Transposase DDE domain CA940_RS00720 PF02281 Transposase Tn5 dimerisation domain CA940_RS00720 PF14706 Transposase DNA-binding CA940_RS00725 PF13542 Helix-turn-helix domain of transposase family ISL3 CA940_RS00725 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CA940_RS00725 PF01610 Transposase CA940_RS00790 PF13505 Outer membrane protein beta-barrel domain CA940_RS00810 PF05661 Protein of unknown function (DUF808) CA940_RS00815 PF00472 RF-1 domain CA940_RS00815 PF03462 PCRF domain CA940_RS00860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA940_RS00860 PF03466 LysR substrate binding domain CA940_RS00875 PF01494 FAD binding domain CA940_RS00880 PF07690 Major Facilitator Superfamily CA940_RS00885 PF00206 Lyase CA940_RS00885 PF02655 ATP-grasp domain CA940_RS00900 PF01435 Peptidase family M48 CA940_RS00930 PF00005 ABC transporter CA940_RS00935 PF02653 Branched-chain amino acid transport system / permease component CA940_RS00940 PF01546 Peptidase family M20/M25/M40 CA940_RS00940 PF07687 Peptidase dimerisation domain CA940_RS00945 PF02515 CoA-transferase family III CA940_RS00975 PF00141 Peroxidase CA940_RS00990 PF01906 Putative heavy-metal-binding CA940_RS01020 PF03793 PASTA domain CA940_RS01020 PF00069 Protein kinase domain CA940_RS01040 PF03441 FAD binding domain of DNA photolyase CA940_RS01040 PF00875 DNA photolyase CA940_RS01045 PF04172 LrgB-like family CA940_RS01050 PF03788 LrgA family CA940_RS01055 PF03466 LysR substrate binding domain CA940_RS01055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA940_RS01060 PF03884 DNA gyrase inhibitor YacG CA940_RS01065 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CA940_RS01065 PF02222 ATP-grasp domain CA940_RS01070 PF00731 AIR carboxylase CA940_RS01090 PF00361 Proton-conducting membrane transporter CA940_RS01090 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CA940_RS01095 PF03466 LysR substrate binding domain CA940_RS01095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA940_RS01100 PF03412 Peptidase C39 family CA940_RS01100 PF00005 ABC transporter CA940_RS01100 PF00664 ABC transporter transmembrane region CA940_RS01120 PF13520 Amino acid permease CA940_RS01130 PF17158 Membrane-associated sensor, integral membrane domain CA940_RS01130 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS01135 PF00403 Heavy-metal-associated domain CA940_RS01140 PF01475 Ferric uptake regulator family CA940_RS01145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CA940_RS01145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CA940_RS01145 PF00205 Thiamine pyrophosphate enzyme, central domain CA940_RS01150 PF12252 Dot/Icm substrate protein CA940_RS01185 PF00561 alpha/beta hydrolase fold CA940_RS01190 PF00171 Aldehyde dehydrogenase family CA940_RS01195 PF00202 Aminotransferase class-III CA940_RS01215 PF04960 Glutaminase CA940_RS01220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CA940_RS01220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CA940_RS01220 PF01842 ACT domain CA940_RS01230 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA940_RS01230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CA940_RS01235 PF05088 Bacterial NAD-glutamate dehydrogenase CA940_RS01250 PF03960 ArsC family CA940_RS01260 PF00271 Helicase conserved C-terminal domain CA940_RS01260 PF00270 DEAD/DEAH box helicase CA940_RS01270 PF02592 Putative vitamin uptake transporter CA940_RS01285 PF02321 Outer membrane efflux protein CA940_RS01295 PF13533 Biotin-lipoyl like CA940_RS01325 PF03167 Uracil DNA glycosylase superfamily CA940_RS01340 PF00394 Multicopper oxidase CA940_RS01340 PF07731 Multicopper oxidase CA940_RS01340 PF07732 Multicopper oxidase CA940_RS01350 PF01544 CorA-like Mg2+ transporter protein CA940_RS01360 PF05872 Bacterial protein of unknown function (DUF853) CA940_RS01365 PF05378 Hydantoinase/oxoprolinase N-terminal region CA940_RS01365 PF01968 Hydantoinase/oxoprolinase CA940_RS01370 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CA940_RS01370 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CA940_RS01370 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CA940_RS01375 PF00857 Isochorismatase family CA940_RS01390 PF00892 EamA-like transporter family CA940_RS01395 PF07690 Major Facilitator Superfamily CA940_RS01400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA940_RS01400 PF03466 LysR substrate binding domain CA940_RS01415 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS01415 PF00563 EAL domain CA940_RS01415 PF03707 Bacterial signalling protein N terminal repeat CA940_RS01420 PF13755 Sensor N-terminal transmembrane domain CA940_RS01420 PF00512 His Kinase A (phospho-acceptor) domain CA940_RS01420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS01420 PF00672 HAMP domain CA940_RS01420 PF13756 Stimulus-sensing domain CA940_RS01430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA940_RS01430 PF03466 LysR substrate binding domain CA940_RS01440 PF13520 Amino acid permease CA940_RS01445 PF01209 ubiE/COQ5 methyltransferase family CA940_RS01450 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CA940_RS01450 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CA940_RS01465 PF00106 short chain dehydrogenase CA940_RS01475 PF08207 Elongation factor P (EF-P) KOW-like domain CA940_RS01475 PF09285 Elongation factor P, C-terminal CA940_RS01475 PF01132 Elongation factor P (EF-P) OB domain CA940_RS01480 PF04055 Radical SAM superfamily CA940_RS01485 PF02503 Polyphosphate kinase middle domain CA940_RS01485 PF13090 Polyphosphate kinase C-terminal domain 2 CA940_RS01485 PF17941 Polyphosphate kinase C-terminal domain 1 CA940_RS01485 PF13089 Polyphosphate kinase N-terminal domain CA940_RS01505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CA940_RS01505 PF09317 Domain of unknown function (DUF1974) CA940_RS01505 PF02770 Acyl-CoA dehydrogenase, middle domain CA940_RS01505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CA940_RS01515 PF00483 Nucleotidyl transferase CA940_RS01520 PF01636 Phosphotransferase enzyme family CA940_RS01525 PF04453 LPS transport system D CA940_RS01525 PF03968 OstA-like protein CA940_RS01530 PF00639 PPIC-type PPIASE domain CA940_RS01530 PF09312 SurA N-terminal domain CA940_RS01535 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CA940_RS01540 PF00186 Dihydrofolate reductase CA940_RS01590 PF00009 Elongation factor Tu GTP binding domain CA940_RS01590 PF03143 Elongation factor Tu C-terminal domain CA940_RS01590 PF03144 Elongation factor Tu domain 2 CA940_RS01600 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CA940_RS01605 PF02357 Transcription termination factor nusG CA940_RS01605 PF00467 KOW motif CA940_RS01610 PF00298 Ribosomal protein L11, RNA binding domain CA940_RS01610 PF03946 Ribosomal protein L11, N-terminal domain CA940_RS01615 PF00687 Ribosomal protein L1p/L10e family CA940_RS01620 PF00466 Ribosomal protein L10 CA940_RS01625 PF00542 Ribosomal protein L7/L12 C-terminal domain CA940_RS01625 PF16320 Ribosomal protein L7/L12 dimerisation domain CA940_RS01630 PF04560 RNA polymerase Rpb2, domain 7 CA940_RS01630 PF10385 RNA polymerase beta subunit external 1 domain CA940_RS01630 PF04565 RNA polymerase Rpb2, domain 3 CA940_RS01630 PF00562 RNA polymerase Rpb2, domain 6 CA940_RS01630 PF04563 RNA polymerase beta subunit CA940_RS01630 PF04561 RNA polymerase Rpb2, domain 2 CA940_RS01635 PF04998 RNA polymerase Rpb1, domain 5 CA940_RS01635 PF04983 RNA polymerase Rpb1, domain 3 CA940_RS01635 PF00623 RNA polymerase Rpb1, domain 2 CA940_RS01635 PF04997 RNA polymerase Rpb1, domain 1 CA940_RS01635 PF05000 RNA polymerase Rpb1, domain 4 CA940_RS01640 PF00164 Ribosomal protein S12/S23 CA940_RS01645 PF00177 Ribosomal protein S7p/S5e CA940_RS01650 PF03144 Elongation factor Tu domain 2 CA940_RS01650 PF03764 Elongation factor G, domain IV CA940_RS01650 PF00009 Elongation factor Tu GTP binding domain CA940_RS01650 PF14492 Elongation Factor G, domain II CA940_RS01650 PF00679 Elongation factor G C-terminus CA940_RS01655 PF00009 Elongation factor Tu GTP binding domain CA940_RS01655 PF03144 Elongation factor Tu domain 2 CA940_RS01655 PF03143 Elongation factor Tu C-terminal domain CA940_RS01660 PF00338 Ribosomal protein S10p/S20e CA940_RS01665 PF00297 Ribosomal protein L3 CA940_RS01670 PF00573 Ribosomal protein L4/L1 family CA940_RS01675 PF00276 Ribosomal protein L23 CA940_RS01680 PF03947 Ribosomal Proteins L2, C-terminal domain CA940_RS01680 PF00181 Ribosomal Proteins L2, RNA binding domain CA940_RS01685 PF00203 Ribosomal protein S19 CA940_RS01690 PF00237 Ribosomal protein L22p/L17e CA940_RS01695 PF00189 Ribosomal protein S3, C-terminal domain CA940_RS01695 PF07650 KH domain CA940_RS01700 PF00252 Ribosomal protein L16p/L10e CA940_RS01705 PF00831 Ribosomal L29 protein CA940_RS01710 PF00366 Ribosomal protein S17 CA940_RS01715 PF00238 Ribosomal protein L14p/L23e CA940_RS01720 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CA940_RS01720 PF00467 KOW motif CA940_RS01725 PF00673 ribosomal L5P family C-terminus CA940_RS01725 PF00281 Ribosomal protein L5 CA940_RS01730 PF00253 Ribosomal protein S14p/S29e CA940_RS01735 PF00410 Ribosomal protein S8 CA940_RS01740 PF00347 Ribosomal protein L6 CA940_RS01745 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CA940_RS01750 PF03719 Ribosomal protein S5, C-terminal domain CA940_RS01750 PF00333 Ribosomal protein S5, N-terminal domain CA940_RS01755 PF00327 Ribosomal protein L30p/L7e CA940_RS01760 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CA940_RS01765 PF00344 SecY translocase CA940_RS01770 PF00444 Ribosomal protein L36 CA940_RS01775 PF00416 Ribosomal protein S13/S18 CA940_RS01780 PF00411 Ribosomal protein S11 CA940_RS01785 PF01479 S4 domain CA940_RS01785 PF00163 Ribosomal protein S4/S9 N-terminal domain CA940_RS01790 PF01000 RNA polymerase Rpb3/RpoA insert domain CA940_RS01790 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CA940_RS01790 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CA940_RS01795 PF01196 Ribosomal protein L17 CA940_RS01800 PF00436 Single-strand binding protein family CA940_RS01805 PF07690 Major Facilitator Superfamily CA940_RS01815 PF00550 Phosphopantetheine attachment site CA940_RS01820 PF07977 FabA-like domain CA940_RS01825 PF00109 Beta-ketoacyl synthase, N-terminal domain CA940_RS01825 PF02801 Beta-ketoacyl synthase, C-terminal domain CA940_RS01835 PF03279 Bacterial lipid A biosynthesis acyltransferase CA940_RS01850 PF01678 Diaminopimelate epimerase CA940_RS01865 PF02230 Phospholipase/Carboxylesterase CA940_RS01870 PF03364 Polyketide cyclase / dehydrase and lipid transport CA940_RS01875 PF03658 RnfH family Ubiquitin CA940_RS01880 PF04355 SmpA / OmlA family CA940_RS01885 PF01475 Ferric uptake regulator family CA940_RS01890 PF13185 GAF domain CA940_RS01890 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS01915 PF04107 Glutamate-cysteine ligase family 2(GCS2) CA940_RS01950 PF17755 UvrA DNA-binding domain CA940_RS01950 PF17760 UvrA interaction domain CA940_RS01955 PF04011 LemA family CA940_RS01960 PF01435 Peptidase family M48 CA940_RS01965 PF01061 ABC-2 type transporter CA940_RS01970 PF00005 ABC transporter CA940_RS02005 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CA940_RS02005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CA940_RS02010 PF01245 Ribosomal protein L19 CA940_RS02015 PF01746 tRNA (Guanine-1)-methyltransferase CA940_RS02020 PF01782 RimM N-terminal domain CA940_RS02020 PF05239 PRC-barrel domain CA940_RS02025 PF00886 Ribosomal protein S16 CA940_RS02030 PF00448 SRP54-type protein, GTPase domain CA940_RS02030 PF02881 SRP54-type protein, helical bundle domain CA940_RS02030 PF02978 Signal peptide binding domain CA940_RS02045 PF13520 Amino acid permease CA940_RS02055 PF02627 Carboxymuconolactone decarboxylase family CA940_RS02085 PF02628 Cytochrome oxidase assembly protein CA940_RS02090 PF01040 UbiA prenyltransferase family CA940_RS02095 PF02630 SCO1/SenC CA940_RS02100 PF08443 RimK-like ATP-grasp domain CA940_RS02100 PF18030 RimK PreATP-grasp domain CA940_RS02110 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CA940_RS02110 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CA940_RS02115 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CA940_RS02120 PF00920 Dehydratase family CA940_RS02125 PF02685 Glucokinase CA940_RS02130 PF01081 KDPG and KHG aldolase CA940_RS02135 PF00083 Sugar (and other) transporter CA940_RS02145 PF13443 Cro/C1-type HTH DNA-binding domain CA940_RS02155 PF00762 Ferrochelatase CA940_RS02160 PF00313 'Cold-shock' DNA-binding domain CA940_RS02180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CA940_RS02180 PF00529 HlyD membrane-fusion protein of T1SS CA940_RS02195 PF01638 HxlR-like helix-turn-helix CA940_RS02220 PF02281 Transposase Tn5 dimerisation domain CA940_RS02220 PF01609 Transposase DDE domain CA940_RS02220 PF14706 Transposase DNA-binding CA940_RS02265 PF01580 FtsK/SpoIIIE family CA940_RS02320 PF00083 Sugar (and other) transporter CA940_RS02335 PF02142 MGS-like domain CA940_RS02335 PF01808 AICARFT/IMPCHase bienzyme CA940_RS02345 PF02785 Biotin carboxylase C-terminal domain CA940_RS02345 PF00289 Biotin carboxylase, N-terminal domain CA940_RS02345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CA940_RS02350 PF00364 Biotin-requiring enzyme CA940_RS02355 PF01220 Dehydroquinase class II CA940_RS02365 PF02436 Conserved carboxylase domain CA940_RS02365 PF00364 Biotin-requiring enzyme CA940_RS02365 PF00682 HMGL-like CA940_RS02370 PF07504 Fungalysin/Thermolysin Propeptide Motif CA940_RS02370 PF01447 Thermolysin metallopeptidase, catalytic domain CA940_RS02370 PF02868 Thermolysin metallopeptidase, alpha-helical domain CA940_RS02375 PF00364 Biotin-requiring enzyme CA940_RS02375 PF00561 alpha/beta hydrolase fold CA940_RS02380 PF03372 Endonuclease/Exonuclease/phosphatase family CA940_RS02385 PF00274 Fructose-bisphosphate aldolase class-I CA940_RS02390 PF00175 Oxidoreductase NAD-binding domain CA940_RS02390 PF00970 Oxidoreductase FAD-binding domain CA940_RS02390 PF00111 2Fe-2S iron-sulfur cluster binding domain CA940_RS02405 PF01066 CDP-alcohol phosphatidyltransferase CA940_RS02410 PF00381 PTS HPr component phosphorylation site CA940_RS02415 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CA940_RS02420 PF04552 Sigma-54, DNA binding domain CA940_RS02420 PF04963 Sigma-54 factor, core binding domain CA940_RS02420 PF00309 Sigma-54 factor, Activator interacting domain (AID) CA940_RS02425 PF00471 Ribosomal protein L33 CA940_RS02430 PF00830 Ribosomal L28 family CA940_RS02440 PF02390 Putative methyltransferase CA940_RS02445 PF05343 M42 glutamyl aminopeptidase CA940_RS02455 PF01145 SPFH domain / Band 7 family CA940_RS02455 PF12221 Bacterial membrane protein N terminal CA940_RS02460 PF01145 SPFH domain / Band 7 family CA940_RS02465 PF00709 Adenylosuccinate synthetase CA940_RS02475 PF01316 Arginine repressor, DNA binding domain CA940_RS02475 PF02863 Arginine repressor, C-terminal domain CA940_RS02480 PF00497 Bacterial extracellular solute-binding proteins, family 3 CA940_RS02485 PF00528 Binding-protein-dependent transport system inner membrane component CA940_RS02490 PF00005 ABC transporter CA940_RS02495 PF00764 Arginosuccinate synthase CA940_RS02500 PF14698 Argininosuccinate lyase C-terminal CA940_RS02500 PF00206 Lyase CA940_RS02505 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CA940_RS02505 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CA940_RS02520 PF03572 Peptidase family S41 CA940_RS02520 PF13180 PDZ domain CA940_RS02525 PF01551 Peptidase family M23 CA940_RS02530 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CA940_RS02530 PF01676 Metalloenzyme superfamily CA940_RS02545 PF01255 Putative undecaprenyl diphosphate synthase CA940_RS02555 PF02163 Peptidase family M50 CA940_RS02555 PF17820 PDZ domain CA940_RS02560 PF01103 Surface antigen CA940_RS02560 PF07244 Surface antigen variable number repeat CA940_RS02570 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CA940_RS02570 PF00132 Bacterial transferase hexapeptide (six repeats) CA940_RS02575 PF07977 FabA-like domain CA940_RS02580 PF00132 Bacterial transferase hexapeptide (six repeats) CA940_RS02580 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CA940_RS02585 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CA940_RS02595 PF04229 GrpB protein CA940_RS02605 PF00248 Aldo/keto reductase family CA940_RS02635 PF00485 Phosphoribulokinase / Uridine kinase family CA940_RS02670 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CA940_RS02675 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CA940_RS02680 PF02910 Fumarate reductase flavoprotein C-term CA940_RS02680 PF00890 FAD binding domain CA940_RS02685 PF13085 2Fe-2S iron-sulfur cluster binding domain CA940_RS02690 PF16870 2-oxoglutarate dehydrogenase C-terminal CA940_RS02690 PF16078 2-oxoglutarate dehydrogenase N-terminus CA940_RS02690 PF02779 Transketolase, pyrimidine binding domain CA940_RS02690 PF00676 Dehydrogenase E1 component CA940_RS02700 PF00549 CoA-ligase CA940_RS02700 PF08442 ATP-grasp domain CA940_RS02705 PF02629 CoA binding domain CA940_RS02705 PF00549 CoA-ligase CA940_RS02710 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CA940_RS02710 PF01243 Pyridoxamine 5'-phosphate oxidase CA940_RS02725 PF07690 Major Facilitator Superfamily CA940_RS02735 PF02954 Bacterial regulatory protein, Fis family CA940_RS02740 PF14572 Phosphoribosyl synthetase-associated domain CA940_RS02740 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CA940_RS02760 PF03550 Outer membrane lipoprotein LolB CA940_RS02765 PF01467 Cytidylyltransferase-like CA940_RS02785 PF00893 Small Multidrug Resistance protein CA940_RS02790 PF00672 HAMP domain CA940_RS02790 PF00211 Adenylate and Guanylate cyclase catalytic domain CA940_RS02805 PF00817 impB/mucB/samB family CA940_RS02805 PF11799 impB/mucB/samB family C-terminal domain CA940_RS02805 PF11798 IMS family HHH motif CA940_RS02820 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CA940_RS02820 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CA940_RS02820 PF06827 Zinc finger found in FPG and IleRS CA940_RS02840 PF00106 short chain dehydrogenase CA940_RS02845 PF00106 short chain dehydrogenase CA940_RS02850 PF07879 PHB/PHA accumulation regulator DNA-binding domain CA940_RS02850 PF05233 PHB accumulation regulatory domain CA940_RS02870 PF07670 Nucleoside recognition CA940_RS02875 PF01551 Peptidase family M23 CA940_RS02875 PF04225 Opacity-associated protein A LysM-like domain CA940_RS02880 PF00579 tRNA synthetases class I (W and Y) CA940_RS02905 PF00132 Bacterial transferase hexapeptide (six repeats) CA940_RS02915 PF00962 Adenosine/AMP deaminase CA940_RS02925 PF01384 Phosphate transporter family CA940_RS02930 PF01865 Protein of unknown function DUF47 CA940_RS02940 PF02622 Uncharacterized ACR, COG1678 CA940_RS02945 PF03652 Holliday junction resolvase CA940_RS02950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CA940_RS02950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CA940_RS02965 PF13335 Magnesium chelatase, subunit ChlI C-terminal CA940_RS02965 PF01078 Magnesium chelatase, subunit ChlI CA940_RS02970 PF04380 Membrane fusogenic activity CA940_RS02975 PF00543 Nitrogen regulatory protein P-II CA940_RS02980 PF01812 5-formyltetrahydrofolate cyclo-ligase family CA940_RS02990 PF01063 Amino-transferase class IV CA940_RS03000 PF01553 Acyltransferase CA940_RS03000 PF00501 AMP-binding enzyme CA940_RS03010 PF00561 alpha/beta hydrolase fold CA940_RS03010 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CA940_RS03015 PF02082 Transcriptional regulator CA940_RS03020 PF01458 Uncharacterized protein family (UPF0051) CA940_RS03025 PF00005 ABC transporter CA940_RS03030 PF01458 Uncharacterized protein family (UPF0051) CA940_RS03035 PF00266 Aminotransferase class-V CA940_RS03040 PF01592 NifU-like N terminal domain CA940_RS03045 PF01883 Iron-sulfur cluster assembly protein CA940_RS03050 PF00152 tRNA synthetases class II (D, K and N) CA940_RS03055 PF18125 RlmM ferredoxin-like domain CA940_RS03055 PF01728 FtsJ-like methyltransferase CA940_RS03070 PF00571 CBS domain CA940_RS03070 PF01595 Cyclin M transmembrane N-terminal domain CA940_RS03070 PF03471 Transporter associated domain CA940_RS03075 PF00107 Zinc-binding dehydrogenase CA940_RS03075 PF08240 Alcohol dehydrogenase GroES-like domain CA940_RS03090 PF01327 Polypeptide deformylase CA940_RS03100 PF04107 Glutamate-cysteine ligase family 2(GCS2) CA940_RS03110 PF14489 QueF-like protein CA940_RS03110 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term CA940_RS03125 PF13673 Acetyltransferase (GNAT) domain CA940_RS03125 PF03352 Methyladenine glycosylase CA940_RS03125 PF13302 Acetyltransferase (GNAT) domain CA940_RS03125 PF00958 GMP synthase C terminal domain CA940_RS03125 PF00117 Glutamine amidotransferase class-I CA940_RS03165 PF03772 Competence protein CA940_RS03165 PF00753 Metallo-beta-lactamase superfamily CA940_RS03170 PF07963 Prokaryotic N-terminal methylation motif CA940_RS03170 PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor CA940_RS03175 PF05567 Neisseria PilC beta-propeller domain CA940_RS03210 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase CA940_RS03215 PF00265 Thymidine kinase CA940_RS03230 PF01676 Metalloenzyme superfamily CA940_RS03240 PF00227 Proteasome subunit CA940_RS03245 PF00004 ATPase family associated with various cellular activities (AAA) CA940_RS03245 PF07724 AAA domain (Cdc48 subfamily) CA940_RS03255 PF03631 Virulence factor BrkB CA940_RS03275 PF03358 NADPH-dependent FMN reductase CA940_RS03285 PF03372 Endonuclease/Exonuclease/phosphatase family CA940_RS03290 PF03372 Endonuclease/Exonuclease/phosphatase family CA940_RS03295 PF01197 Ribosomal protein L31 CA940_RS03300 PF03949 Malic enzyme, NAD binding domain CA940_RS03300 PF00390 Malic enzyme, N-terminal domain CA940_RS03315 PF02086 D12 class N6 adenine-specific DNA methyltransferase CA940_RS03320 PF03222 Tryptophan/tyrosine permease family CA940_RS03325 PF03222 Tryptophan/tyrosine permease family CA940_RS03330 PF04355 SmpA / OmlA family CA940_RS03330 PF00691 OmpA family CA940_RS03340 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CA940_RS03345 PF00005 ABC transporter CA940_RS03360 PF02321 Outer membrane efflux protein CA940_RS03370 PF07690 Major Facilitator Superfamily CA940_RS03375 PF01464 Transglycosylase SLT domain CA940_RS03375 PF14718 Soluble lytic murein transglycosylase L domain CA940_RS03380 PF00834 Ribulose-phosphate 3 epimerase family CA940_RS03395 PF05114 Protein of unknown function (DUF692) CA940_RS03410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA940_RS03415 PF06314 Acetoacetate decarboxylase (ADC) CA940_RS03425 PF00211 Adenylate and Guanylate cyclase catalytic domain CA940_RS03425 PF00072 Response regulator receiver domain CA940_RS03435 PF05114 Protein of unknown function (DUF692) CA940_RS03450 PF08335 GlnD PII-uridylyltransferase CA940_RS03450 PF03710 Glutamate-ammonia ligase adenylyltransferase CA940_RS03465 PF00005 ABC transporter CA940_RS03475 PF18693 TRAM domain CA940_RS03475 PF00919 Uncharacterized protein family UPF0004 CA940_RS03475 PF04055 Radical SAM superfamily CA940_RS03480 PF11412 Disulphide bond corrector protein DsbC CA940_RS03480 PF02683 Cytochrome C biogenesis protein transmembrane region CA940_RS03485 PF00166 Chaperonin 10 Kd subunit CA940_RS03490 PF00118 TCP-1/cpn60 chaperonin family CA940_RS03495 PF00210 Ferritin-like domain CA940_RS03505 PF00204 DNA gyrase B CA940_RS03505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS03505 PF01751 Toprim domain CA940_RS03505 PF00986 DNA gyrase B subunit, carboxyl terminus CA940_RS03510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CA940_RS03510 PF00005 ABC transporter CA940_RS03525 PF03129 Anticodon binding domain CA940_RS03525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CA940_RS03525 PF04073 Aminoacyl-tRNA editing domain CA940_RS03545 PF01171 PP-loop family CA940_RS03550 PF02321 Outer membrane efflux protein CA940_RS03560 PF00155 Aminotransferase class I and II CA940_RS03565 PF08240 Alcohol dehydrogenase GroES-like domain CA940_RS03565 PF00107 Zinc-binding dehydrogenase CA940_RS03570 PF12848 ABC transporter CA940_RS03570 PF00005 ABC transporter CA940_RS03580 PF04143 Sulphur transport CA940_RS03600 PF00491 Arginase family CA940_RS03610 PF01979 Amidohydrolase family CA940_RS03620 PF03169 OPT oligopeptide transporter protein CA940_RS03625 PF00672 HAMP domain CA940_RS03625 PF00512 His Kinase A (phospho-acceptor) domain CA940_RS03625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS03630 PF00072 Response regulator receiver domain CA940_RS03630 PF00486 Transcriptional regulatory protein, C terminal CA940_RS03645 PF00375 Sodium:dicarboxylate symporter family CA940_RS03650 PF00133 tRNA synthetases class I (I, L, M and V) CA940_RS03650 PF10458 Valyl tRNA synthetase tRNA binding arm CA940_RS03650 PF08264 Anticodon-binding domain of tRNA CA940_RS03655 PF00873 AcrB/AcrD/AcrF family CA940_RS03660 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CA940_RS03680 PF00464 Serine hydroxymethyltransferase CA940_RS03685 PF03477 ATP cone domain CA940_RS03690 PF01029 NusB family CA940_RS03695 PF00586 AIR synthase related protein, N-terminal domain CA940_RS03695 PF02769 AIR synthase related protein, C-terminal domain CA940_RS03700 PF04608 Phosphatidylglycerophosphatase A CA940_RS03705 PF01594 AI-2E family transporter CA940_RS03725 PF00795 Carbon-nitrogen hydrolase CA940_RS03725 PF02540 NAD synthase CA940_RS03730 PF00176 SNF2 family N-terminal domain CA940_RS03730 PF00271 Helicase conserved C-terminal domain CA940_RS03730 PF12419 SNF2 Helicase protein CA940_RS03740 PF03796 DnaB-like helicase C terminal domain CA940_RS03740 PF00772 DnaB-like helicase N terminal domain CA940_RS03745 PF00842 Alanine racemase, C-terminal domain CA940_RS03745 PF01168 Alanine racemase, N-terminal domain CA940_RS03770 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS03775 PF04055 Radical SAM superfamily CA940_RS03780 PF01541 GIY-YIG catalytic domain CA940_RS03785 PF00854 POT family CA940_RS03805 PF00977 Histidine biosynthesis protein CA940_RS03810 PF00117 Glutamine amidotransferase class-I CA940_RS03815 PF02348 Cytidylyltransferase CA940_RS03820 PF08666 SAF domain CA940_RS03820 PF03102 NeuB family CA940_RS03825 PF02350 UDP-N-acetylglucosamine 2-epimerase CA940_RS03835 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CA940_RS03840 PF01061 ABC-2 type transporter CA940_RS03845 PF14524 Wzt C-terminal domain CA940_RS03845 PF00005 ABC transporter CA940_RS03855 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CA940_RS03860 PF04321 RmlD substrate binding domain CA940_RS03865 PF16363 GDP-mannose 4,6 dehydratase CA940_RS03875 PF00342 Phosphoglucose isomerase CA940_RS03880 PF00483 Nucleotidyl transferase CA940_RS03885 PF01370 NAD dependent epimerase/dehydratase family CA940_RS03890 PF00953 Glycosyl transferase family 4 CA940_RS03895 PF03062 MBOAT, membrane-bound O-acyltransferase family CA940_RS03920 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CA940_RS03920 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CA940_RS03950 PF03102 NeuB family CA940_RS03950 PF08666 SAF domain CA940_RS03960 PF02348 Cytidylyltransferase CA940_RS03990 PF02719 Polysaccharide biosynthesis protein CA940_RS03995 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CA940_RS04005 PF02348 Cytidylyltransferase CA940_RS04045 PF03062 MBOAT, membrane-bound O-acyltransferase family CA940_RS04065 PF02348 Cytidylyltransferase CA940_RS04095 PF03062 MBOAT, membrane-bound O-acyltransferase family CA940_RS04100 PF00753 Metallo-beta-lactamase superfamily CA940_RS04100 PF16123 Hydroxyacylglutathione hydrolase C-terminus CA940_RS04105 PF02599 Global regulator protein family CA940_RS04110 PF02237 Biotin protein ligase C terminal domain CA940_RS04110 PF03099 Biotin/lipoate A/B protein ligase family CA940_RS04115 PF01648 4'-phosphopantetheinyl transferase superfamily CA940_RS04120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CA940_RS04125 PF11734 TilS substrate C-terminal domain CA940_RS04125 PF01171 PP-loop family CA940_RS04125 PF09179 TilS substrate binding domain CA940_RS04140 PF03062 MBOAT, membrane-bound O-acyltransferase family CA940_RS04145 PF03315 Serine dehydratase beta chain CA940_RS04145 PF03313 Serine dehydratase alpha chain CA940_RS04150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CA940_RS04150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase CA940_RS04155 PF07690 Major Facilitator Superfamily CA940_RS04165 PF13542 Helix-turn-helix domain of transposase family ISL3 CA940_RS04165 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CA940_RS04165 PF01610 Transposase CA940_RS04180 PF02445 Quinolinate synthetase A protein CA940_RS04185 PF00890 FAD binding domain CA940_RS04185 PF02910 Fumarate reductase flavoprotein C-term CA940_RS04190 PF00206 Lyase CA940_RS04190 PF08328 Adenylosuccinate lyase C-terminal CA940_RS04195 PF00916 Sulfate permease family CA940_RS04195 PF01740 STAS domain CA940_RS04200 PF18158 Adaptive response protein AidB N-terminal domain CA940_RS04200 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CA940_RS04200 PF02770 Acyl-CoA dehydrogenase, middle domain CA940_RS04210 PF00391 PEP-utilising enzyme, mobile domain CA940_RS04210 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CA940_RS04210 PF02896 PEP-utilising enzyme, TIM barrel domain CA940_RS04215 PF00999 Sodium/hydrogen exchanger family CA940_RS04220 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CA940_RS04220 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CA940_RS04225 PF04101 Glycosyltransferase family 28 C-terminal domain CA940_RS04225 PF03033 Glycosyltransferase family 28 N-terminal domain CA940_RS04230 PF07687 Peptidase dimerisation domain CA940_RS04230 PF01546 Peptidase family M20/M25/M40 CA940_RS04245 PF04085 rod shape-determining protein MreC CA940_RS04250 PF04093 rod shape-determining protein MreD CA940_RS04255 PF00849 RNA pseudouridylate synthase CA940_RS04265 PF00180 Isocitrate/isopropylmalate dehydrogenase CA940_RS04270 PF02617 ATP-dependent Clp protease adaptor protein ClpS CA940_RS04275 PF10431 C-terminal, D2-small domain, of ClpB protein CA940_RS04275 PF00004 ATPase family associated with various cellular activities (AAA) CA940_RS04275 PF17871 AAA lid domain CA940_RS04275 PF07724 AAA domain (Cdc48 subfamily) CA940_RS04275 PF02861 Clp amino terminal domain, pathogenicity island component CA940_RS04280 PF00535 Glycosyl transferase family 2 CA940_RS04295 PF01694 Rhomboid family CA940_RS04305 PF13742 OB-fold nucleic acid binding domain CA940_RS04305 PF02601 Exonuclease VII, large subunit CA940_RS04335 PF00563 EAL domain CA940_RS04335 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS04335 PF03707 Bacterial signalling protein N terminal repeat CA940_RS04340 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS04340 PF00563 EAL domain CA940_RS04340 PF03707 Bacterial signalling protein N terminal repeat CA940_RS04345 PF02630 SCO1/SenC CA940_RS04350 PF00106 short chain dehydrogenase CA940_RS04355 PF00218 Indole-3-glycerol phosphate synthase CA940_RS04360 PF00591 Glycosyl transferase family, a/b domain CA940_RS04360 PF02885 Glycosyl transferase family, helical bundle domain CA940_RS04365 PF00117 Glutamine amidotransferase class-I CA940_RS04370 PF00005 ABC transporter CA940_RS04370 PF12399 Branched-chain amino acid ATP-binding cassette transporter CA940_RS04390 PF00571 CBS domain CA940_RS04390 PF01380 SIS domain CA940_RS04395 PF00005 ABC transporter CA940_RS04400 PF02405 Permease MlaE CA940_RS04405 PF02470 MlaD protein CA940_RS04420 PF01722 BolA-like protein CA940_RS04425 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CA940_RS04430 PF01784 NIF3 (NGG1p interacting factor 3) CA940_RS04435 PF00005 ABC transporter CA940_RS04440 PF12704 MacB-like periplasmic core domain CA940_RS04440 PF02687 FtsX-like permease family CA940_RS04455 PF06490 Flagellar regulatory protein FleQ CA940_RS04455 PF02954 Bacterial regulatory protein, Fis family CA940_RS04455 PF00158 Sigma-54 interaction domain CA940_RS04465 PF08496 Peptidase family S49 N-terminal CA940_RS04465 PF01343 Peptidase family S49 CA940_RS04470 PF00005 ABC transporter CA940_RS04475 PF03379 CcmB protein CA940_RS04480 PF01578 Cytochrome C assembly protein CA940_RS04490 PF03100 CcmE CA940_RS04495 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CA940_RS04495 PF01578 Cytochrome C assembly protein CA940_RS04500 PF08534 Redoxin CA940_RS04505 PF03918 Cytochrome C biogenesis protein CA940_RS04515 PF07311 Dodecin CA940_RS04525 PF02245 Methylpurine-DNA glycosylase (MPG) CA940_RS04530 PF00271 Helicase conserved C-terminal domain CA940_RS04530 PF00570 HRDC domain CA940_RS04530 PF09382 RQC domain CA940_RS04530 PF16124 RecQ zinc-binding CA940_RS04530 PF00270 DEAD/DEAH box helicase CA940_RS04535 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CA940_RS04535 PF02770 Acyl-CoA dehydrogenase, middle domain CA940_RS04535 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CA940_RS04540 PF00378 Enoyl-CoA hydratase/isomerase CA940_RS04545 PF00378 Enoyl-CoA hydratase/isomerase CA940_RS04560 PF00009 Elongation factor Tu GTP binding domain CA940_RS04560 PF03144 Elongation factor Tu domain 2 CA940_RS04560 PF16658 Class II release factor RF3, C-terminal domain CA940_RS04570 PF02233 NAD(P) transhydrogenase beta subunit CA940_RS04575 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch CA940_RS04580 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CA940_RS04580 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CA940_RS04585 PF00188 Cysteine-rich secretory protein family CA940_RS04595 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS04595 PF05230 MASE2 domain CA940_RS04620 PF00933 Glycosyl hydrolase family 3 N terminal domain CA940_RS04620 PF01915 Glycosyl hydrolase family 3 C-terminal domain CA940_RS04625 PF00375 Sodium:dicarboxylate symporter family CA940_RS04630 PF01546 Peptidase family M20/M25/M40 CA940_RS04630 PF07687 Peptidase dimerisation domain CA940_RS04635 PF00132 Bacterial transferase hexapeptide (six repeats) CA940_RS04635 PF14602 Hexapeptide repeat of succinyl-transferase CA940_RS04635 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CA940_RS04640 PF01553 Acyltransferase CA940_RS04645 PF01053 Cys/Met metabolism PLP-dependent enzyme CA940_RS04650 PF00563 EAL domain CA940_RS04650 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS04650 PF03707 Bacterial signalling protein N terminal repeat CA940_RS04655 PF01494 FAD binding domain CA940_RS04680 PF01699 Sodium/calcium exchanger protein CA940_RS04690 PF10576 Iron-sulfur binding domain of endonuclease III CA940_RS04690 PF14815 NUDIX domain CA940_RS04690 PF00730 HhH-GPD superfamily base excision DNA repair protein CA940_RS04690 PF00633 Helix-hairpin-helix motif CA940_RS04715 PF13180 PDZ domain CA940_RS04725 PF00106 short chain dehydrogenase CA940_RS04740 PF13144 Chaperone for flagella basal body P-ring formation CA940_RS04755 PF03309 Type III pantothenate kinase CA940_RS04760 PF02381 MraZ protein, putative antitoxin-like CA940_RS04765 PF01795 MraW methylase family CA940_RS04775 PF00905 Penicillin binding protein transpeptidase domain CA940_RS04775 PF03717 Penicillin-binding Protein dimerisation domain CA940_RS04780 PF02875 Mur ligase family, glutamate ligase domain CA940_RS04780 PF08245 Mur ligase middle domain CA940_RS04780 PF01225 Mur ligase family, catalytic domain CA940_RS04785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CA940_RS04785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CA940_RS04790 PF02163 Peptidase family M50 CA940_RS04795 PF01569 PAP2 superfamily CA940_RS04805 PF01012 Electron transfer flavoprotein domain CA940_RS04810 PF00766 Electron transfer flavoprotein FAD-binding domain CA940_RS04810 PF01012 Electron transfer flavoprotein domain CA940_RS04815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CA940_RS04815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CA940_RS04820 PF00912 Transglycosylase CA940_RS04820 PF00905 Penicillin binding protein transpeptidase domain CA940_RS04820 PF17092 Penicillin-binding protein OB-like domain CA940_RS04830 PF11104 Type IV pilus assembly protein PilM; CA940_RS04840 PF04350 Pilus assembly protein, PilO CA940_RS04850 PF00263 Bacterial type II and III secretion system protein CA940_RS04850 PF03958 Bacterial type II/III secretion system short domain CA940_RS04850 PF07660 Secretin and TonB N terminus short domain CA940_RS04850 PF11741 AMIN domain CA940_RS04855 PF01202 Shikimate kinase CA940_RS04860 PF01761 3-dehydroquinate synthase CA940_RS04870 PF00582 Universal stress protein family CA940_RS04875 PF06574 FAD synthetase CA940_RS04875 PF01687 Riboflavin kinase CA940_RS04880 PF06827 Zinc finger found in FPG and IleRS CA940_RS04880 PF00133 tRNA synthetases class I (I, L, M and V) CA940_RS04880 PF08264 Anticodon-binding domain of tRNA CA940_RS04885 PF01252 Signal peptidase (SPase) II CA940_RS04890 PF01081 KDPG and KHG aldolase CA940_RS04905 PF07650 KH domain CA940_RS04905 PF01926 50S ribosome-binding GTPase CA940_RS04910 PF11967 Recombination protein O N terminal CA940_RS04910 PF02565 Recombination protein O C terminal CA940_RS04915 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ CA940_RS04920 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CA940_RS04920 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CA940_RS04920 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CA940_RS04925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CA940_RS04930 PF01027 Inhibitor of apoptosis-promoting Bax1 CA940_RS04935 PF00795 Carbon-nitrogen hydrolase CA940_RS04940 PF01523 Putative modulator of DNA gyrase CA940_RS04945 PF01734 Patatin-like phospholipase CA940_RS04950 PF00501 AMP-binding enzyme CA940_RS04955 PF17757 UvrB interaction domain CA940_RS04955 PF02559 CarD-like/TRCF domain CA940_RS04955 PF00270 DEAD/DEAH box helicase CA940_RS04955 PF00271 Helicase conserved C-terminal domain CA940_RS04955 PF03461 TRCF domain CA940_RS04975 PF00533 BRCA1 C Terminus (BRCT) domain CA940_RS04975 PF01653 NAD-dependent DNA ligase adenylation domain CA940_RS04975 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CA940_RS04975 PF12826 Helix-hairpin-helix motif CA940_RS04975 PF03120 NAD-dependent DNA ligase OB-fold domain CA940_RS04985 PF00528 Binding-protein-dependent transport system inner membrane component CA940_RS04990 PF00528 Binding-protein-dependent transport system inner membrane component CA940_RS04990 PF12911 N-terminal TM domain of oligopeptide transport permease C CA940_RS05015 PF02719 Polysaccharide biosynthesis protein CA940_RS05035 PF00324 Amino acid permease CA940_RS05070 PF13274 Protein of unknown function (DUF4065) CA940_RS05080 PF00436 Single-strand binding protein family CA940_RS05235 PF02599 Global regulator protein family CA940_RS05300 PF00873 AcrB/AcrD/AcrF family CA940_RS05310 PF01022 Bacterial regulatory protein, arsR family CA940_RS05320 PF00403 Heavy-metal-associated domain CA940_RS05340 PF00313 'Cold-shock' DNA-binding domain CA940_RS05345 PF00106 short chain dehydrogenase CA940_RS05360 PF01381 Helix-turn-helix CA940_RS05365 PF03551 Transcriptional regulator PadR-like family CA940_RS05365 PF13847 Methyltransferase domain CA940_RS05375 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS05375 PF00563 EAL domain CA940_RS05375 PF03707 Bacterial signalling protein N terminal repeat CA940_RS05380 PF01526 Tn3 transposase DDE domain CA940_RS05380 PF13700 Domain of unknown function (DUF4158) CA940_RS05390 PF08241 Methyltransferase domain CA940_RS05420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CA940_RS05425 PF00873 AcrB/AcrD/AcrF family CA940_RS05435 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CA940_RS05435 PF00561 alpha/beta hydrolase fold CA940_RS05445 PF01327 Polypeptide deformylase CA940_RS05475 PF00589 Phage integrase family CA940_RS05475 PF13356 Arm DNA-binding domain CA940_RS05480 PF13542 Helix-turn-helix domain of transposase family ISL3 CA940_RS05480 PF01610 Transposase CA940_RS05480 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CA940_RS05540 PF04229 GrpB protein CA940_RS05555 PF02661 Fic/DOC family CA940_RS05555 PF12728 Helix-turn-helix domain CA940_RS05565 PF13419 Haloacid dehalogenase-like hydrolase CA940_RS05595 PF06055 Exopolysaccharide synthesis, ExoD CA940_RS05620 PF01641 SelR domain CA940_RS05620 PF01625 Peptide methionine sulfoxide reductase CA940_RS05675 PF00704 Glycosyl hydrolases family 18 CA940_RS05675 PF00041 Fibronectin type III domain CA940_RS05685 PF00144 Beta-lactamase CA940_RS05710 PF01476 LysM domain CA940_RS05710 PF01464 Transglycosylase SLT domain CA940_RS05725 PF00497 Bacterial extracellular solute-binding proteins, family 3 CA940_RS05735 PF13193 AMP-binding enzyme C-terminal domain CA940_RS05735 PF00501 AMP-binding enzyme CA940_RS05755 PF00211 Adenylate and Guanylate cyclase catalytic domain CA940_RS05775 PF03060 Nitronate monooxygenase CA940_RS05800 PF13416 Bacterial extracellular solute-binding protein CA940_RS05805 PF00528 Binding-protein-dependent transport system inner membrane component CA940_RS05810 PF00528 Binding-protein-dependent transport system inner membrane component CA940_RS05815 PF08402 TOBE domain CA940_RS05815 PF00005 ABC transporter CA940_RS05835 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CA940_RS05855 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CA940_RS05855 PF12833 Helix-turn-helix domain CA940_RS05855 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CA940_RS05855 PF02805 Metal binding domain of Ada CA940_RS05870 PF01593 Flavin containing amine oxidoreductase CA940_RS05875 PF00293 NUDIX domain CA940_RS05890 PF00205 Thiamine pyrophosphate enzyme, central domain CA940_RS05890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CA940_RS05890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CA940_RS05910 PF00892 EamA-like transporter family CA940_RS05920 PF05139 Erythromycin esterase CA940_RS05920 PF00156 Phosphoribosyl transferase domain CA940_RS05930 PF07690 Major Facilitator Superfamily CA940_RS05935 PF07687 Peptidase dimerisation domain CA940_RS05935 PF01546 Peptidase family M20/M25/M40 CA940_RS05940 PF00485 Phosphoribulokinase / Uridine kinase family CA940_RS05950 PF04461 Protein of unknown function (DUF520) CA940_RS05955 PF00563 EAL domain CA940_RS05955 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS05955 PF03707 Bacterial signalling protein N terminal repeat CA940_RS05960 PF01875 Memo-like protein CA940_RS05980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS05980 PF00512 His Kinase A (phospho-acceptor) domain CA940_RS05985 PF00158 Sigma-54 interaction domain CA940_RS05985 PF00072 Response regulator receiver domain CA940_RS05985 PF02954 Bacterial regulatory protein, Fis family CA940_RS06000 PF01435 Peptidase family M48 CA940_RS06010 PF00677 Lumazine binding domain CA940_RS06015 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CA940_RS06015 PF00925 GTP cyclohydrolase II CA940_RS06020 PF00885 6,7-dimethyl-8-ribityllumazine synthase CA940_RS06025 PF06418 CTP synthase N-terminus CA940_RS06025 PF00117 Glutamine amidotransferase class-I CA940_RS06030 PF00793 DAHP synthetase I family CA940_RS06050 PF13525 Outer membrane lipoprotein CA940_RS06055 PF04381 Putative exonuclease, RdgC CA940_RS06060 PF02705 K+ potassium transporter CA940_RS06070 PF10672 S-adenosylmethionine-dependent methyltransferase CA940_RS06070 PF17785 PUA-like domain CA940_RS06075 PF00933 Glycosyl hydrolase family 3 N terminal domain CA940_RS06075 PF01915 Glycosyl hydrolase family 3 C-terminal domain CA940_RS06080 PF01965 DJ-1/PfpI family CA940_RS06085 PF01502 Phosphoribosyl-AMP cyclohydrolase CA940_RS06085 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CA940_RS06090 PF00977 Histidine biosynthesis protein CA940_RS06095 PF00977 Histidine biosynthesis protein CA940_RS06100 PF00117 Glutamine amidotransferase class-I CA940_RS06105 PF00475 Imidazoleglycerol-phosphate dehydratase CA940_RS06110 PF00155 Aminotransferase class I and II CA940_RS06115 PF00815 Histidinol dehydrogenase CA940_RS06120 PF08029 HisG, C-terminal domain CA940_RS06120 PF01634 ATP phosphoribosyltransferase CA940_RS06130 PF01654 Cytochrome bd terminal oxidase subunit I CA940_RS06135 PF02322 Cytochrome bd terminal oxidase subunit II CA940_RS06145 PF00156 Phosphoribosyl transferase domain CA940_RS06150 PF00313 'Cold-shock' DNA-binding domain CA940_RS06160 PF04073 Aminoacyl-tRNA editing domain CA940_RS06160 PF03129 Anticodon binding domain CA940_RS06160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CA940_RS06165 PF01047 MarR family CA940_RS06170 PF02567 Phenazine biosynthesis-like protein CA940_RS06175 PF13302 Acetyltransferase (GNAT) domain CA940_RS06180 PF01810 LysE type translocator CA940_RS06205 PF02979 Nitrile hydratase, alpha chain CA940_RS06215 PF02211 Nitrile hydratase beta subunit CA940_RS06225 PF01218 Coproporphyrinogen III oxidase CA940_RS06230 PF00460 Flagella basal body rod protein CA940_RS06235 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CA940_RS06235 PF00460 Flagella basal body rod protein CA940_RS06240 PF03963 Flagellar hook capping protein - N-terminal region CA940_RS06245 PF00460 Flagella basal body rod protein CA940_RS06245 PF07559 Flagellar basal body protein FlaE CA940_RS06245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CA940_RS06250 PF00460 Flagella basal body rod protein CA940_RS06250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CA940_RS06255 PF00460 Flagella basal body rod protein CA940_RS06255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CA940_RS06260 PF02107 Flagellar L-ring protein CA940_RS06265 PF02119 Flagellar P-ring protein CA940_RS06270 PF10135 Rod binding protein CA940_RS06270 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CA940_RS06275 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CA940_RS06275 PF07196 Flagellin hook IN motif CA940_RS06305 PF02080 TrkA-C domain CA940_RS06305 PF03600 Citrate transporter CA940_RS06315 PF00005 ABC transporter CA940_RS06315 PF00664 ABC transporter transmembrane region CA940_RS06330 PF00390 Malic enzyme, N-terminal domain CA940_RS06330 PF03949 Malic enzyme, NAD binding domain CA940_RS06340 PF01975 Survival protein SurE CA940_RS06345 PF01476 LysM domain CA940_RS06345 PF01551 Peptidase family M23 CA940_RS06350 PF04542 Sigma-70 region 2 CA940_RS06350 PF04539 Sigma-70 region 3 CA940_RS06350 PF04545 Sigma-70, region 4 CA940_RS06350 PF00140 Sigma-70 factor, region 1.2 CA940_RS06355 PF04209 homogentisate 1,2-dioxygenase CA940_RS06360 PF01709 Transcriptional regulator CA940_RS06365 PF02075 Crossover junction endodeoxyribonuclease RuvC CA940_RS06370 PF07499 RuvA, C-terminal domain CA940_RS06370 PF01330 RuvA N terminal domain CA940_RS06380 PF00512 His Kinase A (phospho-acceptor) domain CA940_RS06380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS06380 PF08521 Two-component sensor kinase N-terminal CA940_RS06385 PF00072 Response regulator receiver domain CA940_RS06385 PF00486 Transcriptional regulatory protein, C terminal CA940_RS06390 PF04279 Intracellular septation protein A CA940_RS06395 PF01464 Transglycosylase SLT domain CA940_RS06395 PF01476 LysM domain CA940_RS06400 PF00753 Metallo-beta-lactamase superfamily CA940_RS06400 PF16123 Hydroxyacylglutathione hydrolase C-terminus CA940_RS06405 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ CA940_RS06415 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CA940_RS06415 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CA940_RS06435 PF08338 Domain of unknown function (DUF1731) CA940_RS06435 PF01370 NAD dependent epimerase/dehydratase family CA940_RS06440 PF01416 tRNA pseudouridine synthase CA940_RS06445 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CA940_RS06450 PF00291 Pyridoxal-phosphate dependent enzyme CA940_RS06455 PF00290 Tryptophan synthase alpha chain CA940_RS06460 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CA940_RS06460 PF00749 tRNA synthetases class I (E and Q), catalytic domain CA940_RS06465 PF01406 tRNA synthetases class I (C) catalytic domain CA940_RS06465 PF09190 DALR domain CA940_RS06480 PF00437 Type II/IV secretion system protein CA940_RS06485 PF03958 Bacterial type II/III secretion system short domain CA940_RS06485 PF00263 Bacterial type II and III secretion system protein CA940_RS06490 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CA940_RS06490 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CA940_RS06495 PF00672 HAMP domain CA940_RS06495 PF00211 Adenylate and Guanylate cyclase catalytic domain CA940_RS06495 PF02743 Cache domain CA940_RS06500 PF07690 Major Facilitator Superfamily CA940_RS06505 PF00083 Sugar (and other) transporter CA940_RS06505 PF07690 Major Facilitator Superfamily CA940_RS06510 PF04183 IucA / IucC family CA940_RS06510 PF06276 Ferric iron reductase FhuF-like transporter CA940_RS06530 PF00595 PDZ domain CA940_RS06535 PF02578 Multi-copper polyphenol oxidoreductase laccase CA940_RS06540 PF01479 S4 domain CA940_RS06540 PF00849 RNA pseudouridylate synthase CA940_RS06545 PF04055 Radical SAM superfamily CA940_RS06545 PF01938 TRAM domain CA940_RS06545 PF00919 Uncharacterized protein family UPF0004 CA940_RS06560 PF02561 Flagellar protein FliS CA940_RS06565 PF07195 Flagellar hook-associated protein 2 C-terminus CA940_RS06565 PF02465 Flagellar hook-associated protein 2 N-terminus CA940_RS06575 PF00669 Bacterial flagellin N-terminal helical region CA940_RS06575 PF00700 Bacterial flagellin C-terminal helical region CA940_RS06580 PF17848 Acetyl-coA carboxylase zinc finger domain CA940_RS06580 PF01039 Carboxyl transferase domain CA940_RS06585 PF08245 Mur ligase middle domain CA940_RS06585 PF02875 Mur ligase family, glutamate ligase domain CA940_RS06595 PF02674 Colicin V production protein CA940_RS06600 PF01467 Cytidylyltransferase-like CA940_RS06615 PF09334 tRNA synthetases class I (M) CA940_RS06615 PF00133 tRNA synthetases class I (I, L, M and V) CA940_RS06615 PF08264 Anticodon-binding domain of tRNA CA940_RS06615 PF13603 Leucyl-tRNA synthetase, Domain 2 CA940_RS06620 PF00795 Carbon-nitrogen hydrolase CA940_RS06630 PF00171 Aldehyde dehydrogenase family CA940_RS06635 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CA940_RS06635 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CA940_RS06635 PF00378 Enoyl-CoA hydratase/isomerase CA940_RS06640 PF02803 Thiolase, C-terminal domain CA940_RS06640 PF00108 Thiolase, N-terminal domain CA940_RS06660 PF00563 EAL domain CA940_RS06660 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS06660 PF03707 Bacterial signalling protein N terminal repeat CA940_RS06665 PF03934 Type II secretion system (T2SS), protein K CA940_RS06670 PF11612 Type II secretion system (T2SS), protein J CA940_RS06670 PF07963 Prokaryotic N-terminal methylation motif CA940_RS06675 PF07963 Prokaryotic N-terminal methylation motif CA940_RS06675 PF02501 Type II secretion system (T2SS), protein I CA940_RS06680 PF12019 Type II transport protein GspH CA940_RS06680 PF07963 Prokaryotic N-terminal methylation motif CA940_RS06685 PF07963 Prokaryotic N-terminal methylation motif CA940_RS06685 PF08334 Type II secretion system (T2SS), protein G CA940_RS06690 PF00482 Type II secretion system (T2SS), protein F CA940_RS06695 PF03951 Glutamine synthetase, beta-Grasp domain CA940_RS06695 PF00120 Glutamine synthetase, catalytic domain CA940_RS06705 PF03883 Peroxide stress protein YaaA CA940_RS06710 PF00291 Pyridoxal-phosphate dependent enzyme CA940_RS06720 PF00183 Hsp90 protein CA940_RS06720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS06725 PF02954 Bacterial regulatory protein, Fis family CA940_RS06730 PF02684 Lipid-A-disaccharide synthetase CA940_RS06735 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CA940_RS06735 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CA940_RS06745 PF01351 Ribonuclease HII CA940_RS06750 PF01098 Cell cycle protein CA940_RS06755 PF03717 Penicillin-binding Protein dimerisation domain CA940_RS06755 PF00905 Penicillin binding protein transpeptidase domain CA940_RS06760 PF02590 Predicted SPOUT methyltransferase CA940_RS06770 PF00854 POT family CA940_RS06775 PF17391 Urocanase N-terminal domain CA940_RS06775 PF17392 Urocanase C-terminal domain CA940_RS06775 PF01175 Urocanase Rossmann-like domain CA940_RS06780 PF00221 Aromatic amino acid lyase CA940_RS06785 PF00171 Aldehyde dehydrogenase family CA940_RS06790 PF00106 short chain dehydrogenase CA940_RS06795 PF00075 RNase H CA940_RS06800 PF00929 Exonuclease CA940_RS06820 PF01521 Iron-sulphur cluster biosynthesis CA940_RS06840 PF01783 Ribosomal L32p protein family CA940_RS06845 PF02504 Fatty acid synthesis protein CA940_RS06850 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CA940_RS06850 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CA940_RS06855 PF00698 Acyl transferase domain CA940_RS06865 PF00550 Phosphopantetheine attachment site CA940_RS06870 PF02801 Beta-ketoacyl synthase, C-terminal domain CA940_RS06870 PF00109 Beta-ketoacyl synthase, N-terminal domain CA940_RS06875 PF02618 YceG-like family CA940_RS06880 PF02223 Thymidylate kinase CA940_RS06885 PF12169 DNA polymerase III subunits gamma and tau domain III CA940_RS06895 PF01026 TatD related DNase CA940_RS06900 PF03702 Anhydro-N-acetylmuramic acid kinase CA940_RS06910 PF07690 Major Facilitator Superfamily CA940_RS06915 PF00535 Glycosyl transferase family 2 CA940_RS06940 PF05191 Adenylate kinase, active site lid CA940_RS06945 PF00085 Thioredoxin CA940_RS06950 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CA940_RS06950 PF01266 FAD dependent oxidoreductase CA940_RS06955 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CA940_RS06955 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CA940_RS06960 PF00285 Citrate synthase, C-terminal domain CA940_RS06970 PF00521 DNA gyrase/topoisomerase IV, subunit A CA940_RS06970 PF03989 DNA gyrase C-terminal domain, beta-propeller CA940_RS06975 PF00266 Aminotransferase class-V CA940_RS06980 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CA940_RS06985 PF02224 Cytidylate kinase CA940_RS06990 PF00575 S1 RNA binding domain CA940_RS07000 PF18073 Rubredoxin metal binding domain CA940_RS07005 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CA940_RS07010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CA940_RS07020 PF00106 short chain dehydrogenase CA940_RS07035 PF01040 UbiA prenyltransferase family CA940_RS07050 PF01791 DeoC/LacD family aldolase CA940_RS07055 PF01048 Phosphorylase superfamily CA940_RS07060 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CA940_RS07070 PF00672 HAMP domain CA940_RS07070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS07070 PF00512 His Kinase A (phospho-acceptor) domain CA940_RS07070 PF16750 Sensor domain of 2-component histidine kinase CA940_RS07075 PF00486 Transcriptional regulatory protein, C terminal CA940_RS07075 PF00072 Response regulator receiver domain CA940_RS07080 PF03471 Transporter associated domain CA940_RS07080 PF00571 CBS domain CA940_RS07085 PF02130 Uncharacterized protein family UPF0054 CA940_RS07090 PF02562 PhoH-like protein CA940_RS07095 PF02811 PHP domain CA940_RS07100 PF01300 Telomere recombination CA940_RS07105 PF00579 tRNA synthetases class I (W and Y) CA940_RS07110 PF02616 Segregation and condensation protein ScpA CA940_RS07115 PF04079 Segregation and condensation complex subunit ScpB CA940_RS07120 PF00849 RNA pseudouridylate synthase CA940_RS07120 PF01479 S4 domain CA940_RS07140 PF01161 Phosphatidylethanolamine-binding protein CA940_RS07165 PF07690 Major Facilitator Superfamily CA940_RS07175 PF01938 TRAM domain CA940_RS07175 PF05958 tRNA (Uracil-5-)-methyltransferase CA940_RS07180 PF13291 ACT domain CA940_RS07180 PF02824 TGS domain CA940_RS07180 PF04607 Region found in RelA / SpoT proteins CA940_RS07185 PF04430 Protein of unknown function (DUF498/DUF598) CA940_RS07190 PF00155 Aminotransferase class I and II CA940_RS07200 PF01368 DHH family CA940_RS07200 PF17768 RecJ OB domain CA940_RS07200 PF02272 DHHA1 domain CA940_RS07205 PF01207 Dihydrouridine synthase (Dus) CA940_RS07210 PF01043 SecA preprotein cross-linking domain CA940_RS07210 PF07517 SecA DEAD-like domain CA940_RS07210 PF02810 SEC-C motif CA940_RS07210 PF07516 SecA Wing and Scaffold domain CA940_RS07215 PF00293 NUDIX domain CA940_RS07230 PF01121 Dephospho-CoA kinase CA940_RS07240 PF00563 EAL domain CA940_RS07240 PF12792 CSS motif domain associated with EAL CA940_RS07250 PF00202 Aminotransferase class-III CA940_RS07255 PF06968 Biotin and Thiamin Synthesis associated domain CA940_RS07255 PF04055 Radical SAM superfamily CA940_RS07260 PF00155 Aminotransferase class I and II CA940_RS07265 PF12697 Alpha/beta hydrolase family CA940_RS07285 PF02938 GAD domain CA940_RS07285 PF00152 tRNA synthetases class II (D, K and N) CA940_RS07285 PF01336 OB-fold nucleic acid binding domain CA940_RS07290 PF12794 Mechanosensitive ion channel inner membrane domain 1 CA940_RS07290 PF12795 Mechanosensitive ion channel porin domain CA940_RS07290 PF00924 Mechanosensitive ion channel CA940_RS07295 PF02976 DNA mismatch repair enzyme MutH CA940_RS07310 PF03793 PASTA domain CA940_RS07310 PF00069 Protein kinase domain CA940_RS07325 PF01037 Lrp/AsnC ligand binding domain CA940_RS07345 PF00211 Adenylate and Guanylate cyclase catalytic domain CA940_RS07420 PF12252 Dot/Icm substrate protein CA940_RS07425 PF11940 Domain of unknown function (DUF3458) Ig-like fold CA940_RS07425 PF01433 Peptidase family M1 domain CA940_RS07425 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CA940_RS07450 PF00583 Acetyltransferase (GNAT) family CA940_RS07455 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CA940_RS07455 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA940_RS07460 PF02817 e3 binding domain CA940_RS07460 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CA940_RS07460 PF00364 Biotin-requiring enzyme CA940_RS07465 PF17831 Pyruvate dehydrogenase E1 component middle domain CA940_RS07465 PF00456 Transketolase, thiamine diphosphate binding domain CA940_RS07475 PF03186 CobD/Cbib protein CA940_RS07480 PF02254 TrkA-N domain CA940_RS07480 PF00999 Sodium/hydrogen exchanger family CA940_RS07485 PF03330 Lytic transglycolase CA940_RS07485 PF05036 Sporulation related domain CA940_RS07490 PF07943 Penicillin-binding protein 5, C-terminal domain CA940_RS07490 PF00768 D-alanyl-D-alanine carboxypeptidase CA940_RS07495 PF01063 Amino-transferase class IV CA940_RS07500 PF04359 Protein of unknown function (DUF493) CA940_RS07505 PF03099 Biotin/lipoate A/B protein ligase family CA940_RS07510 PF09335 SNARE associated Golgi protein CA940_RS07520 PF03734 L,D-transpeptidase catalytic domain CA940_RS07525 PF00005 ABC transporter CA940_RS07525 PF03412 Peptidase C39 family CA940_RS07525 PF00664 ABC transporter transmembrane region CA940_RS07540 PF00156 Phosphoribosyl transferase domain CA940_RS07555 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CA940_RS07555 PF00437 Type II/IV secretion system protein CA940_RS07560 PF00482 Type II secretion system (T2SS), protein F CA940_RS07565 PF01478 Type IV leader peptidase family CA940_RS07565 PF06750 Bacterial Peptidase A24 N-terminal domain CA940_RS07585 PF03618 Kinase/pyrophosphorylase CA940_RS07590 PF03972 MmgE/PrpD family CA940_RS07595 PF00285 Citrate synthase, C-terminal domain CA940_RS07600 PF02567 Phenazine biosynthesis-like protein CA940_RS07605 PF05430 S-adenosyl-L-methionine-dependent methyltransferase CA940_RS07605 PF01266 FAD dependent oxidoreductase CA940_RS07610 PF00854 POT family CA940_RS07615 PF00202 Aminotransferase class-III CA940_RS07620 PF00301 Rubredoxin CA940_RS07625 PF03653 Uncharacterised protein family (UPF0093) CA940_RS07630 PF03741 Integral membrane protein TerC family CA940_RS07635 PF01743 Poly A polymerase head domain CA940_RS07635 PF12627 Probable RNA and SrmB- binding site of polymerase A CA940_RS07635 PF12626 Polymerase A arginine-rich C-terminus CA940_RS07640 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CA940_RS07645 PF00582 Universal stress protein family CA940_RS07650 PF01926 50S ribosome-binding GTPase CA940_RS07650 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CA940_RS07655 PF13360 PQQ-like domain CA940_RS07665 PF13393 Histidyl-tRNA synthetase CA940_RS07665 PF03129 Anticodon binding domain CA940_RS07680 PF04055 Radical SAM superfamily CA940_RS07685 PF00334 Nucleoside diphosphate kinase CA940_RS07695 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) CA940_RS07705 PF00149 Calcineurin-like phosphoesterase CA940_RS07710 PF05209 Septum formation inhibitor MinC, N-terminal domain CA940_RS07710 PF03775 Septum formation inhibitor MinC, C-terminal domain CA940_RS07715 PF00501 AMP-binding enzyme CA940_RS07715 PF13193 AMP-binding enzyme C-terminal domain CA940_RS07720 PF00497 Bacterial extracellular solute-binding proteins, family 3 CA940_RS07725 PF00293 NUDIX domain CA940_RS07730 PF00425 chorismate binding enzyme CA940_RS07730 PF04715 Anthranilate synthase component I, N terminal region CA940_RS07735 PF00676 Dehydrogenase E1 component CA940_RS07740 PF02779 Transketolase, pyrimidine binding domain CA940_RS07740 PF02780 Transketolase, C-terminal domain CA940_RS07745 PF02817 e3 binding domain CA940_RS07745 PF00364 Biotin-requiring enzyme CA940_RS07745 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CA940_RS07775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CA940_RS07775 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA940_RS07775 PF00403 Heavy-metal-associated domain CA940_RS07790 PF09084 NMT1/THI5 like CA940_RS07795 PF01266 FAD dependent oxidoreductase CA940_RS07805 PF05690 Thiazole biosynthesis protein ThiG CA940_RS07810 PF02581 Thiamine monophosphate synthase CA940_RS07815 PF00899 ThiF family CA940_RS07815 PF00581 Rhodanese-like domain CA940_RS07825 PF04052 TolB amino-terminal domain CA940_RS07825 PF07676 WD40-like Beta Propeller Repeat CA940_RS07835 PF02472 Biopolymer transport protein ExbD/TolR CA940_RS07840 PF01618 MotA/TolQ/ExbB proton channel family CA940_RS07845 PF03061 Thioesterase superfamily CA940_RS07850 PF17864 RuvB AAA lid domain CA940_RS07850 PF05491 RuvB C-terminal winged helix domain CA940_RS07850 PF05496 Holliday junction DNA helicase RuvB P-loop domain CA940_RS07855 PF08281 Sigma-70, region 4 CA940_RS07855 PF04542 Sigma-70 region 2 CA940_RS07865 PF03937 Flavinator of succinate dehydrogenase CA940_RS07875 PF01292 Prokaryotic cytochrome b561 CA940_RS07880 PF05088 Bacterial NAD-glutamate dehydrogenase CA940_RS07885 PF01476 LysM domain CA940_RS07885 PF03734 L,D-transpeptidase catalytic domain CA940_RS07890 PF00171 Aldehyde dehydrogenase family CA940_RS07895 PF01066 CDP-alcohol phosphatidyltransferase CA940_RS07920 PF03948 Ribosomal protein L9, C-terminal domain CA940_RS07920 PF01281 Ribosomal protein L9, N-terminal domain CA940_RS07930 PF01084 Ribosomal protein S18 CA940_RS07935 PF01250 Ribosomal protein S6 CA940_RS07940 PF02599 Global regulator protein family CA940_RS07950 PF01476 LysM domain CA940_RS07950 PF03734 L,D-transpeptidase catalytic domain CA940_RS07950 PF17969 L,D-transpeptidase C-terminal domain CA940_RS07955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CA940_RS07955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CA940_RS07955 PF00378 Enoyl-CoA hydratase/isomerase CA940_RS07960 PF00108 Thiolase, N-terminal domain CA940_RS07960 PF02803 Thiolase, C-terminal domain CA940_RS07980 PF13542 Helix-turn-helix domain of transposase family ISL3 CA940_RS07980 PF01610 Transposase CA940_RS07980 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CA940_RS08005 PF05175 Methyltransferase small domain CA940_RS08010 PF00311 Phosphoenolpyruvate carboxylase CA940_RS08015 PF00293 NUDIX domain CA940_RS08025 PF00696 Amino acid kinase family CA940_RS08025 PF01472 PUA domain CA940_RS08030 PF00583 Acetyltransferase (GNAT) family CA940_RS08040 PF07739 TipAS antibiotic-recognition domain CA940_RS08040 PF13411 MerR HTH family regulatory protein CA940_RS08045 PF07739 TipAS antibiotic-recognition domain CA940_RS08045 PF13411 MerR HTH family regulatory protein CA940_RS08055 PF04229 GrpB protein CA940_RS08055 PF13673 Acetyltransferase (GNAT) domain CA940_RS08060 PF00664 ABC transporter transmembrane region CA940_RS08060 PF00005 ABC transporter CA940_RS08065 PF12848 ABC transporter CA940_RS08065 PF00005 ABC transporter CA940_RS08075 PF00905 Penicillin binding protein transpeptidase domain CA940_RS08080 PF00905 Penicillin binding protein transpeptidase domain CA940_RS08080 PF03717 Penicillin-binding Protein dimerisation domain CA940_RS08105 PF01142 tRNA pseudouridine synthase D (TruD) CA940_RS08110 PF00561 alpha/beta hydrolase fold CA940_RS08140 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CA940_RS08145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CA940_RS08145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CA940_RS08150 PF00534 Glycosyl transferases group 1 CA940_RS08150 PF13439 Glycosyltransferase Family 4 CA940_RS08160 PF01565 FAD binding domain CA940_RS08160 PF13183 4Fe-4S dicluster domain CA940_RS08160 PF02913 FAD linked oxidases, C-terminal domain CA940_RS08180 PF05977 Transmembrane secretion effector CA940_RS08190 PF01169 Uncharacterized protein family UPF0016 CA940_RS08200 PF00291 Pyridoxal-phosphate dependent enzyme CA940_RS08200 PF14821 Threonine synthase N terminus CA940_RS08215 PF01292 Prokaryotic cytochrome b561 CA940_RS08220 PF04264 YceI-like domain CA940_RS08230 PF01261 Xylose isomerase-like TIM barrel CA940_RS08235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CA940_RS08235 PF00205 Thiamine pyrophosphate enzyme, central domain CA940_RS08235 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CA940_RS08240 PF00294 pfkB family carbohydrate kinase CA940_RS08245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CA940_RS08245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CA940_RS08250 PF00083 Sugar (and other) transporter CA940_RS08260 PF04151 Bacterial pre-peptidase C-terminal domain CA940_RS08260 PF02868 Thermolysin metallopeptidase, alpha-helical domain CA940_RS08260 PF01447 Thermolysin metallopeptidase, catalytic domain CA940_RS08260 PF03413 Peptidase propeptide and YPEB domain CA940_RS08260 PF07504 Fungalysin/Thermolysin Propeptide Motif CA940_RS08305 PF06832 Penicillin-Binding Protein C-terminus Family CA940_RS08305 PF00912 Transglycosylase CA940_RS08305 PF00905 Penicillin binding protein transpeptidase domain CA940_RS08310 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain CA940_RS08310 PF11974 Bacterial alpha-2-macroglobulin MG3 domain CA940_RS08310 PF00207 Alpha-2-macroglobulin family CA940_RS08310 PF01835 MG2 domain CA940_RS08310 PF17962 Bacterial macroglobulin domain 6 CA940_RS08310 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain CA940_RS08310 PF07703 Alpha-2-macroglobulin bait region domain CA940_RS08345 PF00551 Formyl transferase CA940_RS08350 PF02844 Phosphoribosylglycinamide synthetase, N domain CA940_RS08350 PF02843 Phosphoribosylglycinamide synthetase, C domain CA940_RS08350 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CA940_RS08355 PF00156 Phosphoribosyl transferase domain CA940_RS08360 PF01259 SAICAR synthetase CA940_RS08370 PF02769 AIR synthase related protein, C-terminal domain CA940_RS08370 PF00586 AIR synthase related protein, N-terminal domain CA940_RS08375 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CA940_RS08375 PF02769 AIR synthase related protein, C-terminal domain CA940_RS08375 PF00586 AIR synthase related protein, N-terminal domain CA940_RS08390 PF02683 Cytochrome C biogenesis protein transmembrane region CA940_RS08390 PF11412 Disulphide bond corrector protein DsbC CA940_RS08400 PF00106 short chain dehydrogenase CA940_RS08430 PF02120 Flagellar hook-length control protein FliK CA940_RS08440 PF00694 Aconitase C-terminal domain CA940_RS08440 PF00330 Aconitase family (aconitate hydratase) CA940_RS08445 PF13520 Amino acid permease CA940_RS08450 PF00171 Aldehyde dehydrogenase family CA940_RS08450 PF18327 Proline utilization A proline dehydrogenase N-terminal domain CA940_RS08450 PF14850 DNA-binding domain of Proline dehydrogenase CA940_RS08450 PF01619 Proline dehydrogenase CA940_RS08460 PF17516 ProQ C-terminal domain CA940_RS08460 PF04352 ProQ/FINO family CA940_RS08490 PF00817 impB/mucB/samB family CA940_RS08490 PF13438 Domain of unknown function (DUF4113) CA940_RS08490 PF11798 IMS family HHH motif CA940_RS08490 PF11799 impB/mucB/samB family C-terminal domain CA940_RS08495 PF00717 Peptidase S24-like CA940_RS08505 PF04958 Arginine N-succinyltransferase beta subunit CA940_RS08510 PF00171 Aldehyde dehydrogenase family CA940_RS08515 PF04996 Succinylarginine dihydrolase CA940_RS08530 PF01765 Ribosome recycling factor CA940_RS08535 PF00696 Amino acid kinase family CA940_RS08540 PF00889 Elongation factor TS CA940_RS08545 PF00318 Ribosomal protein S2 CA940_RS08560 PF00557 Metallopeptidase family M24 CA940_RS08565 PF03445 Putative nucleotidyltransferase DUF294 CA940_RS08565 PF08335 GlnD PII-uridylyltransferase CA940_RS08565 PF01966 HD domain CA940_RS08570 PF14437 MafB19-like deaminase CA940_RS08575 PF02540 NAD synthase CA940_RS08575 PF00117 Glutamine amidotransferase class-I CA940_RS08575 PF00958 GMP synthase C terminal domain CA940_RS08580 PF00478 IMP dehydrogenase / GMP reductase domain CA940_RS08580 PF00571 CBS domain CA940_RS08585 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CA940_RS08590 PF03776 Septum formation topological specificity factor MinE CA940_RS08595 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CA940_RS08595 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CA940_RS08595 PF09317 Domain of unknown function (DUF1974) CA940_RS08595 PF02770 Acyl-CoA dehydrogenase, middle domain CA940_RS08600 PF08386 TAP-like protein CA940_RS08600 PF00561 alpha/beta hydrolase fold CA940_RS08610 PF17912 MalK OB fold domain CA940_RS08610 PF00005 ABC transporter CA940_RS08615 PF00528 Binding-protein-dependent transport system inner membrane component CA940_RS08620 PF00528 Binding-protein-dependent transport system inner membrane component CA940_RS08630 PF00654 Voltage gated chloride channel CA940_RS08635 PF00117 Glutamine amidotransferase class-I CA940_RS08635 PF00425 chorismate binding enzyme CA940_RS08635 PF04715 Anthranilate synthase component I, N terminal region CA940_RS08640 PF02686 Glu-tRNAGln amidotransferase C subunit CA940_RS08645 PF01425 Amidase CA940_RS08650 PF02934 GatB/GatE catalytic domain CA940_RS08650 PF02637 GatB domain CA940_RS08660 PF02954 Bacterial regulatory protein, Fis family CA940_RS08665 PF01521 Iron-sulphur cluster biosynthesis CA940_RS08675 PF00266 Aminotransferase class-V CA940_RS08680 PF00588 SpoU rRNA Methylase family CA940_RS08685 PF00459 Inositol monophosphatase family CA940_RS08690 PF01343 Peptidase family S49 CA940_RS08695 PF10431 C-terminal, D2-small domain, of ClpB protein CA940_RS08695 PF02861 Clp amino terminal domain, pathogenicity island component CA940_RS08695 PF17871 AAA lid domain CA940_RS08695 PF07724 AAA domain (Cdc48 subfamily) CA940_RS08695 PF00004 ATPase family associated with various cellular activities (AAA) CA940_RS08710 PF02875 Mur ligase family, glutamate ligase domain CA940_RS08710 PF08245 Mur ligase middle domain CA940_RS08710 PF01225 Mur ligase family, catalytic domain CA940_RS08720 PF13116 Protein of unknown function CA940_RS08720 PF13502 AsmA-like C-terminal region CA940_RS08730 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CA940_RS08730 PF18269 T3SS EscN ATPase C-terminal domain CA940_RS08740 PF01706 FliG C-terminal domain CA940_RS08740 PF14841 FliG middle domain CA940_RS08740 PF14842 FliG N-terminal domain CA940_RS08745 PF08345 Flagellar M-ring protein C-terminal CA940_RS08745 PF01514 Secretory protein of YscJ/FliF family CA940_RS08750 PF02049 Flagellar hook-basal body complex protein FliE CA940_RS08755 PF00158 Sigma-54 interaction domain CA940_RS08755 PF00072 Response regulator receiver domain CA940_RS08755 PF02954 Bacterial regulatory protein, Fis family CA940_RS08760 PF13188 PAS domain CA940_RS08760 PF00512 His Kinase A (phospho-acceptor) domain CA940_RS08760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS08765 PF00004 ATPase family associated with various cellular activities (AAA) CA940_RS08765 PF16193 AAA C-terminal domain CA940_RS08765 PF12002 MgsA AAA+ ATPase C terminal CA940_RS08770 PF03548 Outer membrane lipoprotein carrier protein LolA CA940_RS08775 PF13491 4TM region of DNA translocase FtsK/SpoIIIE CA940_RS08775 PF17854 FtsK alpha domain CA940_RS08775 PF09397 Ftsk gamma domain CA940_RS08775 PF01580 FtsK/SpoIIIE family CA940_RS08780 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA940_RS08785 PF03588 Leucyl/phenylalanyl-tRNA protein transferase CA940_RS08790 PF00581 Rhodanese-like domain CA940_RS08790 PF01206 Sulfurtransferase TusA CA940_RS08795 PF01176 Translation initiation factor 1A / IF-1 CA940_RS08800 PF01523 Putative modulator of DNA gyrase CA940_RS08815 PF00317 Ribonucleotide reductase, all-alpha domain CA940_RS08815 PF02867 Ribonucleotide reductase, barrel domain CA940_RS08815 PF03477 ATP cone domain CA940_RS08820 PF00268 Ribonucleotide reductase, small chain CA940_RS08830 PF00152 tRNA synthetases class II (D, K and N) CA940_RS08830 PF01336 OB-fold nucleic acid binding domain CA940_RS08845 PF00691 OmpA family CA940_RS08845 PF13677 Membrane MotB of proton-channel complex MotA/MotB CA940_RS08850 PF01618 MotA/TolQ/ExbB proton channel family CA940_RS08855 PF04545 Sigma-70, region 4 CA940_RS08855 PF04542 Sigma-70 region 2 CA940_RS08855 PF04539 Sigma-70 region 3 CA940_RS08860 PF10609 NUBPL iron-transfer P-loop NTPase CA940_RS08865 PF00448 SRP54-type protein, GTPase domain CA940_RS08870 PF00771 FHIPEP family CA940_RS08875 PF01312 FlhB HrpN YscU SpaS Family CA940_RS08880 PF01311 Bacterial export proteins, family 1 CA940_RS08885 PF01313 Bacterial export proteins, family 3 CA940_RS08890 PF00813 FliP family CA940_RS08900 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CA940_RS08905 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CA940_RS08905 PF02154 Flagellar motor switch protein FliM CA940_RS08915 PF04030 D-arabinono-1,4-lactone oxidase CA940_RS08915 PF01565 FAD binding domain CA940_RS08925 PF03466 LysR substrate binding domain CA940_RS08925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA940_RS08940 PF02272 DHHA1 domain CA940_RS08940 PF01411 tRNA synthetases class II (A) CA940_RS08940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CA940_RS08945 PF02631 RecX family CA940_RS08950 PF00154 recA bacterial DNA recombination protein CA940_RS08965 PF02464 Competence-damaged protein CA940_RS08975 PF05192 MutS domain III CA940_RS08975 PF05188 MutS domain II CA940_RS08975 PF00488 MutS domain V CA940_RS08975 PF01624 MutS domain I CA940_RS08975 PF05190 MutS family domain IV CA940_RS08985 PF04357 TamB, inner membrane protein subunit of TAM complex CA940_RS08990 PF00490 Delta-aminolevulinic acid dehydratase CA940_RS09000 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) CA940_RS09005 PF01842 ACT domain CA940_RS09005 PF00696 Amino acid kinase family CA940_RS09010 PF00580 UvrD/REP helicase N-terminal domain CA940_RS09010 PF13361 UvrD-like helicase C-terminal domain CA940_RS09010 PF12705 PD-(D/E)XK nuclease superfamily CA940_RS09015 PF10609 NUBPL iron-transfer P-loop NTPase CA940_RS09025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA940_RS09025 PF03466 LysR substrate binding domain CA940_RS09030 PF07690 Major Facilitator Superfamily CA940_RS09040 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CA940_RS09045 PF00664 ABC transporter transmembrane region CA940_RS09045 PF00005 ABC transporter CA940_RS09055 PF01180 Dihydroorotate dehydrogenase CA940_RS09070 PF02770 Acyl-CoA dehydrogenase, middle domain CA940_RS09070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CA940_RS09070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CA940_RS09075 PF02803 Thiolase, C-terminal domain CA940_RS09075 PF00108 Thiolase, N-terminal domain CA940_RS09085 PF01039 Carboxyl transferase domain CA940_RS09095 PF02785 Biotin carboxylase C-terminal domain CA940_RS09095 PF00289 Biotin carboxylase, N-terminal domain CA940_RS09095 PF00364 Biotin-requiring enzyme CA940_RS09095 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CA940_RS09100 PF00682 HMGL-like CA940_RS09105 PF00501 AMP-binding enzyme CA940_RS09105 PF13193 AMP-binding enzyme C-terminal domain CA940_RS09115 PF00005 ABC transporter CA940_RS09115 PF09383 NIL domain CA940_RS09120 PF00528 Binding-protein-dependent transport system inner membrane component CA940_RS09125 PF03180 NLPA lipoprotein CA940_RS09135 PF04445 Putative SAM-dependent methyltransferase CA940_RS09145 PF02092 Glycyl-tRNA synthetase beta subunit CA940_RS09145 PF05746 DALR anticodon binding domain CA940_RS09150 PF02091 Glycyl-tRNA synthetase alpha subunit CA940_RS09160 PF13361 UvrD-like helicase C-terminal domain CA940_RS09160 PF00580 UvrD/REP helicase N-terminal domain CA940_RS09165 PF00561 alpha/beta hydrolase fold CA940_RS09170 PF02580 D-Tyr-tRNA(Tyr) deacylase CA940_RS09175 PF04333 MlaA lipoprotein CA940_RS09180 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain CA940_RS09180 PF02951 Prokaryotic glutathione synthetase, N-terminal domain CA940_RS09205 PF00581 Rhodanese-like domain CA940_RS09215 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase CA940_RS09220 PF00485 Phosphoribulokinase / Uridine kinase family CA940_RS09250 PF00216 Bacterial DNA-binding protein CA940_RS09255 PF00004 ATPase family associated with various cellular activities (AAA) CA940_RS09255 PF02190 ATP-dependent protease La (LON) substrate-binding domain CA940_RS09255 PF05362 Lon protease (S16) C-terminal proteolytic domain CA940_RS09260 PF06689 ClpX C4-type zinc finger CA940_RS09260 PF10431 C-terminal, D2-small domain, of ClpB protein CA940_RS09260 PF07724 AAA domain (Cdc48 subfamily) CA940_RS09265 PF00574 Clp protease CA940_RS09270 PF05697 Bacterial trigger factor protein (TF) CA940_RS09270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CA940_RS09270 PF05698 Bacterial trigger factor protein (TF) C-terminus CA940_RS09300 PF00005 ABC transporter CA940_RS09300 PF12848 ABC transporter CA940_RS09305 PF14622 Ribonuclease-III-like CA940_RS09305 PF00035 Double-stranded RNA binding motif CA940_RS09315 PF10502 Signal peptidase, peptidase S26 CA940_RS09320 PF06421 GTP-binding protein LepA C-terminus CA940_RS09320 PF00679 Elongation factor G C-terminus CA940_RS09320 PF03144 Elongation factor Tu domain 2 CA940_RS09320 PF00009 Elongation factor Tu GTP binding domain CA940_RS09325 PF13406 Transglycosylase SLT domain CA940_RS09335 PF04612 Type II secretion system (T2SS), protein M CA940_RS09345 PF01966 HD domain CA940_RS09345 PF13286 Phosphohydrolase-associated domain CA940_RS09365 PF01204 Trehalase CA940_RS09375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CA940_RS09380 PF03350 Uncharacterized protein family, UPF0114 CA940_RS09405 PF00708 Acylphosphatase CA940_RS09420 PF07859 alpha/beta hydrolase fold CA940_RS09450 PF00654 Voltage gated chloride channel CA940_RS09460 PF02810 SEC-C motif CA940_RS09465 PF02254 TrkA-N domain CA940_RS09465 PF00999 Sodium/hydrogen exchanger family CA940_RS09470 PF17863 AAA lid domain CA940_RS09470 PF07726 ATPase family associated with various cellular activities (AAA) CA940_RS09480 PF11992 Domain of unknown function (DUF3488) CA940_RS09480 PF13559 Domain of unknown function (DUF4129) CA940_RS09480 PF01841 Transglutaminase-like superfamily CA940_RS09485 PF08007 Cupin superfamily protein CA940_RS09510 PF04315 Elongation factor P hydroxylase CA940_RS09520 PF00043 Glutathione S-transferase, C-terminal domain CA940_RS09520 PF02798 Glutathione S-transferase, N-terminal domain CA940_RS09530 PF00144 Beta-lactamase CA940_RS09535 PF00749 tRNA synthetases class I (E and Q), catalytic domain CA940_RS09540 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) CA940_RS09540 PF00072 Response regulator receiver domain CA940_RS09540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS09540 PF01627 Hpt domain CA940_RS09540 PF00672 HAMP domain CA940_RS09540 PF00512 His Kinase A (phospho-acceptor) domain CA940_RS09545 PF00365 Phosphofructokinase CA940_RS09550 PF00114 Pilin (bacterial filament) CA940_RS09550 PF07963 Prokaryotic N-terminal methylation motif CA940_RS09555 PF07963 Prokaryotic N-terminal methylation motif CA940_RS09555 PF00114 Pilin (bacterial filament) CA940_RS09560 PF01722 BolA-like protein CA940_RS09565 PF13520 Amino acid permease CA940_RS09570 PF02013 Cellulose or protein binding domain CA940_RS09570 PF00553 Cellulose binding domain CA940_RS09570 PF00150 Cellulase (glycosyl hydrolase family 5) CA940_RS09575 PF02348 Cytidylyltransferase CA940_RS09580 PF03966 Trm112p-like protein CA940_RS09585 PF00814 Glycoprotease family CA940_RS09590 PF13307 Helicase C-terminal domain CA940_RS09590 PF04851 Type III restriction enzyme, res subunit CA940_RS09595 PF11953 Domain of unknown function (DUF3470) CA940_RS09595 PF00037 4Fe-4S binding domain CA940_RS09615 PF04362 Bacterial Fe(2+) trafficking CA940_RS09620 PF04227 Indigoidine synthase A like protein CA940_RS09630 PF13542 Helix-turn-helix domain of transposase family ISL3 CA940_RS09630 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CA940_RS09630 PF01610 Transposase CA940_RS09645 PF00512 His Kinase A (phospho-acceptor) domain CA940_RS09645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS09645 PF00672 HAMP domain CA940_RS09655 PF00486 Transcriptional regulatory protein, C terminal CA940_RS09655 PF00072 Response regulator receiver domain CA940_RS09675 PF07804 HipA-like C-terminal domain CA940_RS09675 PF13657 HipA N-terminal domain CA940_RS09685 PF05050 Methyltransferase FkbM domain CA940_RS09710 PF02801 Beta-ketoacyl synthase, C-terminal domain CA940_RS09710 PF00550 Phosphopantetheine attachment site CA940_RS09710 PF00668 Condensation domain CA940_RS09710 PF00698 Acyl transferase domain CA940_RS09710 PF00109 Beta-ketoacyl synthase, N-terminal domain CA940_RS09710 PF16197 Ketoacyl-synthetase C-terminal extension CA940_RS09715 PF13193 AMP-binding enzyme C-terminal domain CA940_RS09715 PF00975 Thioesterase domain CA940_RS09715 PF00668 Condensation domain CA940_RS09715 PF00550 Phosphopantetheine attachment site CA940_RS09715 PF00501 AMP-binding enzyme CA940_RS09725 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CA940_RS09725 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CA940_RS09745 PF02112 cAMP phosphodiesterases class-II CA940_RS09770 PF01575 MaoC like domain CA940_RS09775 PF03328 HpcH/HpaI aldolase/citrate lyase family CA940_RS09780 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CA940_RS09780 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CA940_RS09810 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CA940_RS09810 PF13378 Enolase C-terminal domain-like CA940_RS09815 PF03707 Bacterial signalling protein N terminal repeat CA940_RS09815 PF00563 EAL domain CA940_RS09815 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS09840 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CA940_RS09865 PF18665 Tetracyclin repressor-like, C-terminal domain CA940_RS09865 PF00440 Bacterial regulatory proteins, tetR family CA940_RS09890 PF09334 tRNA synthetases class I (M) CA940_RS09890 PF08264 Anticodon-binding domain of tRNA CA940_RS09890 PF01588 Putative tRNA binding domain CA940_RS09895 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CA940_RS09905 PF00043 Glutathione S-transferase, C-terminal domain CA940_RS09905 PF02798 Glutathione S-transferase, N-terminal domain CA940_RS09910 PF02566 OsmC-like protein CA940_RS09945 PF04488 Glycosyltransferase sugar-binding region containing DXD motif CA940_RS09975 PF01979 Amidohydrolase family CA940_RS09990 PF01872 RibD C-terminal domain CA940_RS10025 PF03562 MltA specific insert domain CA940_RS10025 PF06725 3D domain CA940_RS10045 PF00155 Aminotransferase class I and II CA940_RS10050 PF01329 Pterin 4 alpha carbinolamine dehydratase CA940_RS10055 PF07549 SecD/SecF GG Motif CA940_RS10055 PF02355 Protein export membrane protein CA940_RS10060 PF13721 SecD export protein N-terminal TM region CA940_RS10060 PF07549 SecD/SecF GG Motif CA940_RS10060 PF02355 Protein export membrane protein CA940_RS10065 PF02699 Preprotein translocase subunit CA940_RS10075 PF02547 Queuosine biosynthesis protein CA940_RS10085 PF00005 ABC transporter CA940_RS10085 PF16326 ABC transporter C-terminal domain CA940_RS10085 PF12848 ABC transporter CA940_RS10095 PF01042 Endoribonuclease L-PSP CA940_RS10100 PF04607 Region found in RelA / SpoT proteins CA940_RS10100 PF02824 TGS domain CA940_RS10100 PF13291 ACT domain CA940_RS10105 PF01192 RNA polymerase Rpb6 CA940_RS10110 PF00625 Guanylate kinase CA940_RS10115 PF08340 Domain of unknown function (DUF1732) CA940_RS10115 PF03755 YicC-like family, N-terminal region CA940_RS10120 PF03725 3' exoribonuclease family, domain 2 CA940_RS10120 PF01138 3' exoribonuclease family, domain 1 CA940_RS10125 PF00437 Type II/IV secretion system protein CA940_RS10130 PF01168 Alanine racemase, N-terminal domain CA940_RS10135 PF03807 NADP oxidoreductase coenzyme F420-dependent CA940_RS10135 PF14748 Pyrroline-5-carboxylate reductase dimerisation CA940_RS10155 PF00082 Subtilase family CA940_RS10155 PF01483 Proprotein convertase P-domain CA940_RS10160 PF12833 Helix-turn-helix domain CA940_RS10160 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CA940_RS10165 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CA940_RS10165 PF05221 S-adenosyl-L-homocysteine hydrolase CA940_RS10170 PF02773 S-adenosylmethionine synthetase, C-terminal domain CA940_RS10170 PF02772 S-adenosylmethionine synthetase, central domain CA940_RS10170 PF00438 S-adenosylmethionine synthetase, N-terminal domain CA940_RS10175 PF00117 Glutamine amidotransferase class-I CA940_RS10175 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CA940_RS10180 PF00684 DnaJ central domain CA940_RS10180 PF01556 DnaJ C terminal domain CA940_RS10180 PF00226 DnaJ domain CA940_RS10185 PF00012 Hsp70 protein CA940_RS10190 PF01025 GrpE CA940_RS10195 PF01474 Class-II DAHP synthetase family CA940_RS10200 PF01208 Uroporphyrinogen decarboxylase (URO-D) CA940_RS10205 PF02152 Dihydroneopterin aldolase CA940_RS10215 PF00750 tRNA synthetases class I (R) CA940_RS10215 PF03485 Arginyl tRNA synthetase N terminal domain CA940_RS10215 PF05746 DALR anticodon binding domain CA940_RS10220 PF01594 AI-2E family transporter CA940_RS10230 PF17191 RecG wedge domain CA940_RS10230 PF00270 DEAD/DEAH box helicase CA940_RS10230 PF00271 Helicase conserved C-terminal domain CA940_RS10235 PF01545 Cation efflux family CA940_RS10235 PF16916 Dimerisation domain of Zinc Transporter CA940_RS10245 PF02545 Maf-like protein CA940_RS10250 PF03952 Enolase, N-terminal domain CA940_RS10250 PF00113 Enolase, C-terminal TIM barrel domain CA940_RS10255 PF04977 Septum formation initiator CA940_RS10275 PF16331 TolA binding protein trimerisation CA940_RS10280 PF00691 OmpA family CA940_RS10295 PF00005 ABC transporter CA940_RS10300 PF02405 Permease MlaE CA940_RS10320 PF01070 FMN-dependent dehydrogenase CA940_RS10325 PF00368 Hydroxymethylglutaryl-coenzyme A reductase CA940_RS10350 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CA940_RS10350 PF13542 Helix-turn-helix domain of transposase family ISL3 CA940_RS10350 PF01610 Transposase CA940_RS10355 PF00589 Phage integrase family CA940_RS10385 PF00854 POT family CA940_RS10415 PF02599 Global regulator protein family CA940_RS10420 PF00437 Type II/IV secretion system protein CA940_RS10425 PF04956 TrbC/VIRB2 family CA940_RS10435 PF03135 CagE, TrbE, VirB family, component of type IV transporter system CA940_RS10445 PF03524 Conjugal transfer protein CA940_RS10455 PF03743 Bacterial conjugation TrbI-like protein CA940_RS10470 PF04610 TrbL/VirB6 plasmid conjugal transfer protein CA940_RS10475 PF02534 Type IV secretory system Conjugative DNA transfer CA940_RS10480 PF10502 Signal peptidase, peptidase S26 CA940_RS10485 PF13362 Toprim domain CA940_RS10485 PF08401 Domain of unknown function (DUF1738) CA940_RS10485 PF18818 Metallopeptidase superfamily domain CA940_RS10510 PF03432 Relaxase/Mobilisation nuclease domain CA940_RS10510 PF18821 Large polyvalent protein-associated domain 7 CA940_RS10530 PF11657 Transcriptional activator TraM CA940_RS10560 PF00664 ABC transporter transmembrane region CA940_RS10560 PF00005 ABC transporter CA940_RS10565 PF00005 ABC transporter CA940_RS10565 PF00027 Cyclic nucleotide-binding domain CA940_RS10570 PF02705 K+ potassium transporter CA940_RS10575 PF00313 'Cold-shock' DNA-binding domain CA940_RS10580 PF00271 Helicase conserved C-terminal domain CA940_RS10580 PF03880 DbpA RNA binding domain CA940_RS10580 PF00270 DEAD/DEAH box helicase CA940_RS10600 PF03707 Bacterial signalling protein N terminal repeat CA940_RS10600 PF00563 EAL domain CA940_RS10600 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS10605 PF00083 Sugar (and other) transporter CA940_RS10610 PF00873 AcrB/AcrD/AcrF family CA940_RS10615 PF00529 HlyD membrane-fusion protein of T1SS CA940_RS10615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CA940_RS10630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA940_RS10630 PF03466 LysR substrate binding domain CA940_RS10635 PF01243 Pyridoxamine 5'-phosphate oxidase CA940_RS10635 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CA940_RS10640 PF01638 HxlR-like helix-turn-helix CA940_RS10665 PF00486 Transcriptional regulatory protein, C terminal CA940_RS10665 PF00072 Response regulator receiver domain CA940_RS10670 PF00072 Response regulator receiver domain CA940_RS10670 PF08448 PAS fold CA940_RS10670 PF13426 PAS domain CA940_RS10670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS10670 PF00512 His Kinase A (phospho-acceptor) domain CA940_RS10675 PF07237 Protein of unknown function (DUF1428) CA940_RS10695 PF04439 Streptomycin adenylyltransferase CA940_RS10700 PF00005 ABC transporter CA940_RS10700 PF00664 ABC transporter transmembrane region CA940_RS10705 PF12252 Dot/Icm substrate protein CA940_RS10710 PF12252 Dot/Icm substrate protein CA940_RS10720 PF12252 Dot/Icm substrate protein CA940_RS10725 PF12252 Dot/Icm substrate protein CA940_RS10730 PF12252 Dot/Icm substrate protein CA940_RS10735 PF01435 Peptidase family M48 CA940_RS10750 PF11339 Protein of unknown function (DUF3141) CA940_RS10760 PF12833 Helix-turn-helix domain CA940_RS10760 PF02311 AraC-like ligand binding domain CA940_RS10805 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CA940_RS10805 PF05221 S-adenosyl-L-homocysteine hydrolase CA940_RS10815 PF04909 Amidohydrolase CA940_RS10820 PF00282 Pyridoxal-dependent decarboxylase conserved domain CA940_RS10825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CA940_RS10830 PF00873 AcrB/AcrD/AcrF family CA940_RS10840 PF13193 AMP-binding enzyme C-terminal domain CA940_RS10840 PF00501 AMP-binding enzyme CA940_RS10840 PF16197 Ketoacyl-synthetase C-terminal extension CA940_RS10840 PF00109 Beta-ketoacyl synthase, N-terminal domain CA940_RS10840 PF02801 Beta-ketoacyl synthase, C-terminal domain CA940_RS10840 PF08659 KR domain CA940_RS10840 PF00550 Phosphopantetheine attachment site CA940_RS10840 PF14765 Polyketide synthase dehydratase CA940_RS10840 PF00668 Condensation domain CA940_RS10845 PF00512 His Kinase A (phospho-acceptor) domain CA940_RS10845 PF09308 LuxQ, periplasmic CA940_RS10845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS10845 PF00072 Response regulator receiver domain CA940_RS10850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS10850 PF00072 Response regulator receiver domain CA940_RS10850 PF00989 PAS fold CA940_RS10850 PF01627 Hpt domain CA940_RS10850 PF18415 Histidine kinase receptor ArcB trans-membrane domain CA940_RS10850 PF00512 His Kinase A (phospho-acceptor) domain CA940_RS10855 PF13649 Methyltransferase domain CA940_RS10860 PF02668 Taurine catabolism dioxygenase TauD, TfdA family CA940_RS10870 PF00550 Phosphopantetheine attachment site CA940_RS10870 PF14765 Polyketide synthase dehydratase CA940_RS10870 PF16197 Ketoacyl-synthetase C-terminal extension CA940_RS10870 PF02801 Beta-ketoacyl synthase, C-terminal domain CA940_RS10870 PF00109 Beta-ketoacyl synthase, N-terminal domain CA940_RS10870 PF00698 Acyl transferase domain CA940_RS10870 PF08659 KR domain CA940_RS10895 PF00011 Hsp20/alpha crystallin family CA940_RS10900 PF00011 Hsp20/alpha crystallin family CA940_RS10910 PF00484 Carbonic anhydrase CA940_RS10920 PF02423 Ornithine cyclodeaminase/mu-crystallin family CA940_RS10930 PF00854 POT family CA940_RS10945 PF01139 tRNA-splicing ligase RtcB CA940_RS10960 PF03062 MBOAT, membrane-bound O-acyltransferase family CA940_RS10980 PF08240 Alcohol dehydrogenase GroES-like domain CA940_RS10980 PF00107 Zinc-binding dehydrogenase CA940_RS10985 PF01161 Phosphatidylethanolamine-binding protein CA940_RS11030 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CA940_RS11030 PF00355 Rieske [2Fe-2S] domain CA940_RS11045 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal CA940_RS11045 PF14602 Hexapeptide repeat of succinyl-transferase CA940_RS11045 PF00132 Bacterial transferase hexapeptide (six repeats) CA940_RS11075 PF01039 Carboxyl transferase domain CA940_RS11080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CA940_RS11080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CA940_RS11085 PF00501 AMP-binding enzyme CA940_RS11090 PF13193 AMP-binding enzyme C-terminal domain CA940_RS11090 PF00501 AMP-binding enzyme CA940_RS11105 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CA940_RS11105 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CA940_RS11110 PF00550 Phosphopantetheine attachment site CA940_RS11115 PF07690 Major Facilitator Superfamily CA940_RS11120 PF04116 Fatty acid hydroxylase superfamily CA940_RS11130 PF00005 ABC transporter CA940_RS11130 PF00664 ABC transporter transmembrane region CA940_RS11175 PF00375 Sodium:dicarboxylate symporter family CA940_RS11185 PF09335 SNARE associated Golgi protein CA940_RS11195 PF00958 GMP synthase C terminal domain CA940_RS11195 PF00117 Glutamine amidotransferase class-I CA940_RS11200 PF00465 Iron-containing alcohol dehydrogenase CA940_RS11205 PF00171 Aldehyde dehydrogenase family CA940_RS11210 PF00120 Glutamine synthetase, catalytic domain CA940_RS11220 PF05114 Protein of unknown function (DUF692) CA940_RS11230 PF10996 Beta-Casp domain CA940_RS11230 PF00753 Metallo-beta-lactamase superfamily CA940_RS11230 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CA940_RS11245 PF04972 BON domain CA940_RS11250 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus CA940_RS11250 PF00561 alpha/beta hydrolase fold CA940_RS11255 PF01515 Phosphate acetyl/butaryl transferase CA940_RS11260 PF00871 Acetokinase family CA940_RS11265 PF00226 DnaJ domain CA940_RS11265 PF01556 DnaJ C terminal domain CA940_RS11290 PF01979 Amidohydrolase family CA940_RS11290 PF13382 Adenine deaminase C-terminal domain CA940_RS11320 PF13416 Bacterial extracellular solute-binding protein CA940_RS11325 PF03009 Glycerophosphoryl diester phosphodiesterase family CA940_RS11335 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CA940_RS11335 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CA940_RS11340 PF01596 O-methyltransferase CA940_RS11345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CA940_RS11355 PF02798 Glutathione S-transferase, N-terminal domain CA940_RS11355 PF14497 Glutathione S-transferase, C-terminal domain CA940_RS11365 PF00152 tRNA synthetases class II (D, K and N) CA940_RS11365 PF01336 OB-fold nucleic acid binding domain CA940_RS11375 PF00005 ABC transporter CA940_RS11380 PF12704 MacB-like periplasmic core domain CA940_RS11380 PF02687 FtsX-like permease family CA940_RS11405 PF01609 Transposase DDE domain CA940_RS11410 PF02678 Pirin CA940_RS11410 PF05726 Pirin C-terminal cupin domain CA940_RS11415 PF02525 Flavodoxin-like fold CA940_RS11420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA940_RS11420 PF03466 LysR substrate binding domain CA940_RS11440 PF01066 CDP-alcohol phosphatidyltransferase CA940_RS11445 PF13419 Haloacid dehalogenase-like hydrolase CA940_RS11450 PF00849 RNA pseudouridylate synthase CA940_RS11450 PF01479 S4 domain CA940_RS11465 PF10150 Ribonuclease E/G family CA940_RS11465 PF12111 Polyribonucleotide phosphorylase C terminal CA940_RS11465 PF00575 S1 RNA binding domain CA940_RS11475 PF00271 Helicase conserved C-terminal domain CA940_RS11475 PF18337 RapA N-terminal Tudor like domain CA940_RS11475 PF18339 RapA N-terminal Tudor like domain 1 CA940_RS11475 PF00176 SNF2 family N-terminal domain CA940_RS11475 PF12137 RNA polymerase recycling family C-terminal CA940_RS11490 PF01118 Semialdehyde dehydrogenase, NAD binding domain CA940_RS11490 PF02774 Semialdehyde dehydrogenase, dimerisation domain CA940_RS11495 PF01264 Chorismate synthase CA940_RS11500 PF05175 Methyltransferase small domain CA940_RS11510 PF00581 Rhodanese-like domain CA940_RS11515 PF00462 Glutaredoxin CA940_RS11520 PF02556 Preprotein translocase subunit SecB CA940_RS11525 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CA940_RS11525 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CA940_RS11530 PF01177 Asp/Glu/Hydantoin racemase CA940_RS11555 PF00701 Dihydrodipicolinate synthetase family CA940_RS11580 PF01618 MotA/TolQ/ExbB proton channel family CA940_RS11585 PF13677 Membrane MotB of proton-channel complex MotA/MotB CA940_RS11585 PF00691 OmpA family CA940_RS11605 PF00437 Type II/IV secretion system protein CA940_RS11620 PF18073 Rubredoxin metal binding domain CA940_RS11635 PF02609 Exonuclease VII small subunit CA940_RS11640 PF00348 Polyprenyl synthetase CA940_RS11645 PF08241 Methyltransferase domain CA940_RS11650 PF00156 Phosphoribosyl transferase domain CA940_RS11655 PF02163 Peptidase family M50 CA940_RS11655 PF17820 PDZ domain CA940_RS11665 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CA940_RS11665 PF01488 Shikimate / quinate 5-dehydrogenase CA940_RS11665 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CA940_RS11670 PF03462 PCRF domain CA940_RS11670 PF00472 RF-1 domain CA940_RS11675 PF17827 PrmC N-terminal domain CA940_RS11675 PF13847 Methyltransferase domain CA940_RS11680 PF01258 Prokaryotic dksA/traR C4-type zinc finger CA940_RS11690 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) CA940_RS11695 PF00226 DnaJ domain CA940_RS11695 PF05099 Tellurite resistance protein TerB CA940_RS11705 PF00657 GDSL-like Lipase/Acylhydrolase CA940_RS11720 PF00271 Helicase conserved C-terminal domain CA940_RS11720 PF00270 DEAD/DEAH box helicase CA940_RS11720 PF03880 DbpA RNA binding domain CA940_RS11730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CA940_RS11730 PF07992 Pyridine nucleotide-disulphide oxidoreductase CA940_RS11740 PF00080 Copper/zinc superoxide dismutase (SODC) CA940_RS11745 PF02627 Carboxymuconolactone decarboxylase family CA940_RS11750 PF00578 AhpC/TSA family CA940_RS11760 PF00056 lactate/malate dehydrogenase, NAD binding domain CA940_RS11760 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CA940_RS11765 PF00293 NUDIX domain CA940_RS11770 PF06969 HemN C-terminal domain CA940_RS11770 PF04055 Radical SAM superfamily CA940_RS11775 PF01425 Amidase CA940_RS11780 PF02660 Glycerol-3-phosphate acyltransferase CA940_RS11785 PF00814 Glycoprotease family CA940_RS11790 PF01165 Ribosomal protein S21 CA940_RS11800 PF10410 DnaB-helicase binding domain of primase CA940_RS11800 PF13662 Toprim domain CA940_RS11800 PF01807 CHC2 zinc finger CA940_RS11800 PF08275 DNA primase catalytic core, N-terminal domain CA940_RS11800 PF08278 DNA primase DnaG DnaB-binding CA940_RS11805 PF04546 Sigma-70, non-essential region CA940_RS11805 PF03979 Sigma-70 factor, region 1.1 CA940_RS11805 PF04545 Sigma-70, region 4 CA940_RS11805 PF00140 Sigma-70 factor, region 1.2 CA940_RS11805 PF04539 Sigma-70 region 3 CA940_RS11805 PF04542 Sigma-70 region 2 CA940_RS11820 PF13542 Helix-turn-helix domain of transposase family ISL3 CA940_RS11820 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CA940_RS11820 PF01610 Transposase CA940_RS11840 PF01443 Viral (Superfamily 1) RNA helicase CA940_RS11840 PF03389 MobA/MobL family CA940_RS11840 PF17841 BID domain of Bartonella effector protein (Bep) CA940_RS11870 PF13657 HipA N-terminal domain CA940_RS11875 PF07804 HipA-like C-terminal domain CA940_RS11880 PF13356 Arm DNA-binding domain CA940_RS11880 PF00589 Phage integrase family CA940_RS11890 PF07969 Amidohydrolase family CA940_RS11900 PF00109 Beta-ketoacyl synthase, N-terminal domain CA940_RS11900 PF02801 Beta-ketoacyl synthase, C-terminal domain CA940_RS11900 PF14765 Polyketide synthase dehydratase CA940_RS11900 PF08240 Alcohol dehydrogenase GroES-like domain CA940_RS11900 PF08659 KR domain CA940_RS11900 PF00550 Phosphopantetheine attachment site CA940_RS11900 PF00698 Acyl transferase domain CA940_RS11900 PF16197 Ketoacyl-synthetase C-terminal extension CA940_RS11975 PF03466 LysR substrate binding domain CA940_RS11975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA940_RS11980 PF02705 K+ potassium transporter CA940_RS11995 PF01278 Omptin family CA940_RS12000 PF00141 Peroxidase CA940_RS12010 PF00083 Sugar (and other) transporter CA940_RS12010 PF08946 Osmosensory transporter coiled coil CA940_RS12035 PF13847 Methyltransferase domain CA940_RS12075 PF03466 LysR substrate binding domain CA940_RS12075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA940_RS12125 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS12125 PF00072 Response regulator receiver domain CA940_RS12140 PF00144 Beta-lactamase CA940_RS12205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CA940_RS12205 PF03466 LysR substrate binding domain CA940_RS12210 PF00155 Aminotransferase class I and II CA940_RS12215 PF00083 Sugar (and other) transporter CA940_RS12215 PF08946 Osmosensory transporter coiled coil CA940_RS12220 PF16957 Malonate decarboxylase, alpha subunit, transporter CA940_RS12225 PF01039 Carboxyl transferase domain CA940_RS12240 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase CA940_RS12280 PF07690 Major Facilitator Superfamily CA940_RS12290 PF03358 NADPH-dependent FMN reductase CA940_RS12295 PF13409 Glutathione S-transferase, N-terminal domain CA940_RS12330 PF01427 D-ala-D-ala dipeptidase CA940_RS12375 PF00072 Response regulator receiver domain CA940_RS12380 PF01590 GAF domain CA940_RS12380 PF08446 PAS fold CA940_RS12380 PF00360 Phytochrome region CA940_RS12380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS12380 PF00512 His Kinase A (phospho-acceptor) domain CA940_RS12415 PF00535 Glycosyl transferase family 2 CA940_RS12425 PF00892 EamA-like transporter family CA940_RS12435 PF02627 Carboxymuconolactone decarboxylase family CA940_RS12440 PF01725 Ham1 family CA940_RS12450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CA940_RS12450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CA940_RS12450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CA940_RS12450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CA940_RS12455 PF00692 dUTPase CA940_RS12460 PF04127 DNA / pantothenate metabolism flavoprotein CA940_RS12460 PF02441 Flavoprotein CA940_RS12465 PF04002 RadC-like JAB domain CA940_RS12485 PF00571 CBS domain CA940_RS12495 PF01738 Dienelactone hydrolase family CA940_RS12495 PF00156 Phosphoribosyl transferase domain CA940_RS12500 PF00011 Hsp20/alpha crystallin family CA940_RS12515 PF03435 Saccharopine dehydrogenase NADP binding domain CA940_RS12515 PF16653 Saccharopine dehydrogenase C-terminal domain CA940_RS12520 PF00588 SpoU rRNA Methylase family CA940_RS12530 PF04193 PQ loop repeat CA940_RS12550 PF03641 Possible lysine decarboxylase CA940_RS12555 PF00484 Carbonic anhydrase CA940_RS12560 PF07690 Major Facilitator Superfamily CA940_RS12585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS12585 PF00072 Response regulator receiver domain CA940_RS12600 PF12252 Dot/Icm substrate protein CA940_RS12615 PF00873 AcrB/AcrD/AcrF family CA940_RS12620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CA940_RS12620 PF00529 HlyD membrane-fusion protein of T1SS CA940_RS12630 PF01784 NIF3 (NGG1p interacting factor 3) CA940_RS12635 PF07690 Major Facilitator Superfamily CA940_RS12640 PF01037 Lrp/AsnC ligand binding domain CA940_RS12665 PF14031 Putative serine dehydratase domain CA940_RS12665 PF01168 Alanine racemase, N-terminal domain CA940_RS12720 PF12252 Dot/Icm substrate protein CA940_RS12725 PF00793 DAHP synthetase I family CA940_RS12730 PF00800 Prephenate dehydratase CA940_RS12730 PF01817 Chorismate mutase type II CA940_RS12730 PF01842 ACT domain CA940_RS12740 PF00155 Aminotransferase class I and II CA940_RS12750 PF02082 Transcriptional regulator CA940_RS12755 PF01152 Bacterial-like globin CA940_RS12760 PF00970 Oxidoreductase FAD-binding domain CA940_RS12760 PF00111 2Fe-2S iron-sulfur cluster binding domain CA940_RS12760 PF00175 Oxidoreductase NAD-binding domain CA940_RS12805 PF01588 Putative tRNA binding domain CA940_RS12825 PF00892 EamA-like transporter family CA940_RS12840 PF07690 Major Facilitator Superfamily CA940_RS12845 PF01556 DnaJ C terminal domain CA940_RS12845 PF00684 DnaJ central domain CA940_RS12845 PF00226 DnaJ domain CA940_RS12850 PF05036 Sporulation related domain CA940_RS12850 PF03330 Lytic transglycolase CA940_RS12880 PF01609 Transposase DDE domain CA940_RS12910 PF02899 Phage integrase, N-terminal SAM-like domain CA940_RS12910 PF00589 Phage integrase family CA940_RS12930 PF13542 Helix-turn-helix domain of transposase family ISL3 CA940_RS12930 PF01610 Transposase CA940_RS12930 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 CA940_RS12940 PF04343 Protein of unknown function, DUF488 CA940_RS12960 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CA940_RS12960 PF02770 Acyl-CoA dehydrogenase, middle domain CA940_RS12960 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CA940_RS12965 PF02780 Transketolase, C-terminal domain CA940_RS12965 PF02779 Transketolase, pyrimidine binding domain CA940_RS12990 PF01427 D-ala-D-ala dipeptidase CA940_RS13010 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CA940_RS13015 PF02195 ParB-like nuclease domain CA940_RS13015 PF17762 HTH domain found in ParB protein CA940_RS13030 PF01029 NusB family CA940_RS13030 PF01189 16S rRNA methyltransferase RsmB/F CA940_RS13035 PF02911 Formyl transferase, C-terminal domain CA940_RS13035 PF00551 Formyl transferase CA940_RS13040 PF01327 Polypeptide deformylase CA940_RS13050 PF02481 DNA recombination-mediator protein A CA940_RS13050 PF17782 DprA winged helix domain CA940_RS13060 PF01751 Toprim domain CA940_RS13060 PF01131 DNA topoisomerase CA940_RS13060 PF13368 Topoisomerase C-terminal repeat CA940_RS13065 PF01757 Acyltransferase family CA940_RS13090 PF12146 Serine aminopeptidase, S33 CA940_RS13105 PF05649 Peptidase family M13 CA940_RS13105 PF01431 Peptidase family M13 CA940_RS13110 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase CA940_RS13115 PF12327 FtsZ family, C-terminal domain CA940_RS13115 PF00091 Tubulin/FtsZ family, GTPase domain CA940_RS13120 PF02491 SHS2 domain inserted in FTSA CA940_RS13125 PF08478 POTRA domain, FtsQ-type CA940_RS13125 PF03799 Cell division protein FtsQ CA940_RS13130 PF07478 D-ala D-ala ligase C-terminus CA940_RS13130 PF01820 D-ala D-ala ligase N-terminus CA940_RS13135 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CA940_RS13135 PF01565 FAD binding domain CA940_RS13140 PF02875 Mur ligase family, glutamate ligase domain CA940_RS13140 PF01225 Mur ligase family, catalytic domain CA940_RS13140 PF08245 Mur ligase middle domain CA940_RS13145 PF01098 Cell cycle protein CA940_RS13150 PF02875 Mur ligase family, glutamate ligase domain CA940_RS13150 PF08245 Mur ligase middle domain CA940_RS13155 PF00953 Glycosyl transferase family 4 CA940_RS13155 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CA940_RS13160 PF08245 Mur ligase middle domain CA940_RS13160 PF02875 Mur ligase family, glutamate ligase domain CA940_RS13160 PF01225 Mur ligase family, catalytic domain CA940_RS13165 PF04354 ZipA, C-terminal FtsZ-binding domain CA940_RS13170 PF02463 RecF/RecN/SMC N terminal domain CA940_RS13170 PF06470 SMC proteins Flexible Hinge Domain CA940_RS13200 PF03449 Transcription elongation factor, N-terminal CA940_RS13200 PF01272 Transcription elongation factor, GreA/GreB, C-term CA940_RS13205 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CA940_RS13205 PF02142 MGS-like domain CA940_RS13205 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CA940_RS13225 PF03739 Lipopolysaccharide export system permease LptF/LptG CA940_RS13230 PF03739 Lipopolysaccharide export system permease LptF/LptG CA940_RS13235 PF00883 Cytosol aminopeptidase family, catalytic domain CA940_RS13235 PF02789 Cytosol aminopeptidase family, N-terminal domain CA940_RS13240 PF04364 DNA polymerase III chi subunit, HolC CA940_RS13250 PF00883 Cytosol aminopeptidase family, catalytic domain CA940_RS13250 PF02789 Cytosol aminopeptidase family, N-terminal domain CA940_RS13255 PF03023 Lipid II flippase MurJ CA940_RS13260 PF01649 Ribosomal protein S20 CA940_RS13285 PF03734 L,D-transpeptidase catalytic domain CA940_RS13300 PF01541 GIY-YIG catalytic domain CA940_RS13300 PF08459 UvrC Helix-hairpin-helix N-terminal CA940_RS13300 PF02151 UvrB/uvrC motif CA940_RS13305 PF00196 Bacterial regulatory proteins, luxR family CA940_RS13305 PF00072 Response regulator receiver domain CA940_RS13310 PF00351 Biopterin-dependent aromatic amino acid hydroxylase CA940_RS13315 PF00994 Probable molybdopterin binding domain CA940_RS13315 PF18146 Damage-inducible protein CinA KH domain CA940_RS13315 PF02464 Competence-damaged protein CA940_RS13320 PF01926 50S ribosome-binding GTPase CA940_RS13320 PF01018 GTP1/OBG CA940_RS13325 PF01016 Ribosomal L27 protein CA940_RS13330 PF00829 Ribosomal prokaryotic L21 protein CA940_RS13335 PF14693 Ribosomal protein TL5, C-terminal domain CA940_RS13335 PF01386 Ribosomal L25p family CA940_RS13340 PF01195 Peptidyl-tRNA hydrolase CA940_RS13345 PF06071 Protein of unknown function (DUF933) CA940_RS13345 PF01926 50S ribosome-binding GTPase CA940_RS13350 PF00990 Diguanylate cyclase, GGDEF domain CA940_RS13350 PF00563 EAL domain CA940_RS13350 PF03707 Bacterial signalling protein N terminal repeat CA940_RS13355 PF00348 Polyprenyl synthetase CA940_RS13365 PF02421 Ferrous iron transport protein B CA940_RS13365 PF07664 Ferrous iron transport protein B C terminus CA940_RS13365 PF07670 Nucleoside recognition CA940_RS13375 PF03969 AFG1-like ATPase CA940_RS13385 PF02548 Ketopantoate hydroxymethyltransferase CA940_RS13390 PF02569 Pantoate-beta-alanine ligase CA940_RS13405 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CA940_RS13405 PF02785 Biotin carboxylase C-terminal domain CA940_RS13405 PF00289 Biotin carboxylase, N-terminal domain CA940_RS13420 PF04542 Sigma-70 region 2 CA940_RS13420 PF00140 Sigma-70 factor, region 1.2 CA940_RS13420 PF04545 Sigma-70, region 4 CA940_RS13425 PF18075 FtsX extracellular domain CA940_RS13430 PF00005 ABC transporter CA940_RS13435 PF00448 SRP54-type protein, GTPase domain CA940_RS13435 PF02881 SRP54-type protein, helical bundle domain CA940_RS13440 PF00675 Insulinase (Peptidase family M16) CA940_RS13440 PF05193 Peptidase M16 inactive domain CA940_RS13445 PF05193 Peptidase M16 inactive domain CA940_RS13465 PF00437 Type II/IV secretion system protein CA940_RS13470 PF00746 LPXTG cell wall anchor motif CA940_RS13470 PF00565 Staphylococcal nuclease homologue CA940_RS13470 PF00149 Calcineurin-like phosphoesterase CA940_RS13470 PF02872 5'-nucleotidase, C-terminal domain CA940_RS13475 PF01209 ubiE/COQ5 methyltransferase family CA940_RS13480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CA940_RS13480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CA940_RS13485 PF08245 Mur ligase middle domain CA940_RS13485 PF08443 RimK-like ATP-grasp domain CA940_RS13485 PF02875 Mur ligase family, glutamate ligase domain CA940_RS13490 PF01070 FMN-dependent dehydrogenase CA940_RS13495 PF00682 HMGL-like CA940_RS13495 PF07836 DmpG-like communication domain CA940_RS13505 PF03737 Aldolase/RraA CA940_RS13505 PF00180 Isocitrate/isopropylmalate dehydrogenase CA940_RS13555 PF01209 ubiE/COQ5 methyltransferase family CA940_RS13565 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CA940_RS13580 PF01119 DNA mismatch repair protein, C-terminal domain CA940_RS13580 PF08676 MutL C terminal dimerisation domain CA940_RS13585 PF11741 AMIN domain CA940_RS13585 PF01520 N-acetylmuramoyl-L-alanine amidase CA940_RS13590 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CA940_RS13595 PF03853 YjeF-related protein N-terminus CA940_RS13595 PF01256 Carbohydrate kinase CA940_RS13600 PF04386 Stringent starvation protein B CA940_RS13605 PF00043 Glutathione S-transferase, C-terminal domain CA940_RS13605 PF02798 Glutathione S-transferase, N-terminal domain CA940_RS13610 PF02167 Cytochrome C1 family CA940_RS13615 PF00032 Cytochrome b(C-terminal)/b6/petD CA940_RS13615 PF00033 Cytochrome b/b6/petB CA940_RS13620 PF00355 Rieske [2Fe-2S] domain CA940_RS13620 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal CA940_RS13625 PF00380 Ribosomal protein S9/S16 CA940_RS13630 PF00572 Ribosomal protein L13 CA940_RS13640 PF00216 Bacterial DNA-binding protein CA940_RS13645 PF03147 Ferredoxin-fold anticodon binding domain CA940_RS13645 PF03484 tRNA synthetase B5 domain CA940_RS13645 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CA940_RS13645 PF01588 Putative tRNA binding domain CA940_RS13645 PF03483 B3/4 domain CA940_RS13650 PF01409 tRNA synthetases class II core domain (F) CA940_RS13650 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CA940_RS13655 PF00453 Ribosomal protein L20 CA940_RS13660 PF01632 Ribosomal protein L35 CA940_RS13665 PF00707 Translation initiation factor IF-3, C-terminal domain CA940_RS13665 PF05198 Translation initiation factor IF-3, N-terminal domain CA940_RS13670 PF02824 TGS domain CA940_RS13670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CA940_RS13670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CA940_RS13670 PF03129 Anticodon binding domain CA940_RS13680 PF02594 Uncharacterised ACR, YggU family COG1872 CA940_RS13715 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CA940_RS13735 PF03458 UPF0126 domain CA940_RS13740 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CA940_RS13745 PF01702 Queuine tRNA-ribosyltransferase CA940_RS13750 PF02600 Disulfide bond formation protein DsbB CA940_RS13755 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA940_RS13760 PF00155 Aminotransferase class I and II CA940_RS13765 PF00072 Response regulator receiver domain CA940_RS13775 PF00072 Response regulator receiver domain CA940_RS13775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CA940_RS13780 PF03900 Porphobilinogen deaminase, C-terminal domain CA940_RS13780 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CA940_RS13785 PF02602 Uroporphyrinogen-III synthase HemD CA940_RS13800 PF01545 Cation efflux family CA940_RS13805 PF02677 Epoxyqueuosine reductase QueH CA940_RS13810 PF00929 Exonuclease CA940_RS13815 PF01966 HD domain CA940_RS13815 PF12627 Probable RNA and SrmB- binding site of polymerase A CA940_RS13815 PF01743 Poly A polymerase head domain CA940_RS13820 PF03193 RsgA GTPase CA940_RS13855 PF12170 DNA polymerase III tau subunit V interacting with alpha CA940_RS13855 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding CA940_RS13855 PF12169 DNA polymerase III subunits gamma and tau domain III CA940_RS13860 PF02575 YbaB/EbfC DNA-binding family CA940_RS13865 PF02132 RecR protein CA940_RS13865 PF13662 Toprim domain CA940_RS13885 PF00486 Transcriptional regulatory protein, C terminal CA940_RS13885 PF00072 Response regulator receiver domain CA940_RS13900 PF01595 Cyclin M transmembrane N-terminal domain CA940_RS13900 PF03471 Transporter associated domain CA940_RS13900 PF00571 CBS domain CA940_RS13905 PF00719 Inorganic pyrophosphatase CA940_RS13910 PF01230 HIT domain CA940_RS13915 PF01227 GTP cyclohydrolase I CA940_RS13920 PF07995 Glucose / Sorbosone dehydrogenase CA940_RS13925 PF00575 S1 RNA binding domain CA940_RS13925 PF01138 3' exoribonuclease family, domain 1 CA940_RS13925 PF03725 3' exoribonuclease family, domain 2 CA940_RS13925 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CA940_RS13925 PF00013 KH domain CA940_RS13930 PF00312 Ribosomal protein S15 CA940_RS13935 PF16198 tRNA pseudouridylate synthase B C-terminal domain CA940_RS13935 PF09157 Pseudouridine synthase II TruB, C-terminal CA940_RS13935 PF01509 TruB family pseudouridylate synthase (N terminal domain) CA940_RS13940 PF02033 Ribosome-binding factor A CA940_RS13945 PF00009 Elongation factor Tu GTP binding domain CA940_RS13945 PF11987 Translation-initiation factor 2 CA940_RS13945 PF04760 Translation initiation factor IF-2, N-terminal region CA940_RS13945 PF08364 Bacterial translation initiation factor IF-2 associated region CA940_RS13950 PF13184 NusA-like KH domain CA940_RS13950 PF08529 NusA N-terminal domain CA940_RS13955 PF02576 RimP N-terminal domain CA940_RS13955 PF17384 RimP C-terminal SH3 domain CA940_RS13965 PF00361 Proton-conducting membrane transporter CA940_RS13970 PF00361 Proton-conducting membrane transporter CA940_RS13970 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CA940_RS13975 PF00361 Proton-conducting membrane transporter CA940_RS13975 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CA940_RS13980 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CA940_RS13985 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CA940_RS13990 PF12838 4Fe-4S dicluster domain CA940_RS13995 PF00146 NADH dehydrogenase CA940_RS14000 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal CA940_RS14000 PF00384 Molybdopterin oxidoreductase CA940_RS14000 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CA940_RS14005 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CA940_RS14005 PF10531 SLBB domain CA940_RS14005 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CA940_RS14015 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CA940_RS14020 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CA940_RS14025 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CA940_RS14030 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CA940_RS14040 PF03840 Preprotein translocase SecG subunit CA940_RS14045 PF00121 Triosephosphate isomerase CA940_RS14055 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CA940_RS14055 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CA940_RS14055 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CA940_RS14055 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CA940_RS14060 PF00809 Pterin binding enzyme CA940_RS14065 PF01434 Peptidase family M41 CA940_RS14065 PF00004 ATPase family associated with various cellular activities (AAA) CA940_RS14065 PF17862 AAA+ lid domain CA940_RS14065 PF06480 FtsH Extracellular CA940_RS14070 PF01728 FtsJ-like methyltransferase CA940_RS14075 PF01985 CRS1 / YhbY (CRM) domain CA940_RS14080 PF01757 Acyltransferase family CA940_RS14095 PF01066 CDP-alcohol phosphatidyltransferase CA940_RS14100 PF00308 Bacterial dnaA protein CA940_RS14110 PF00854 POT family CA940_RS14125 PF01488 Shikimate / quinate 5-dehydrogenase CA940_RS14125 PF08501 Shikimate dehydrogenase substrate binding domain CA940_RS14125 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CA940_RS14130 PF11940 Domain of unknown function (DUF3458) Ig-like fold CA940_RS14130 PF01433 Peptidase family M1 domain CA940_RS14130 PF17432 Domain of unknown function (DUF3458_C) ARM repeats CA940_RS14135 PF08298 PrkA AAA domain CA940_RS14135 PF06798 PrkA serine protein kinase C-terminal domain CA940_RS14140 PF04285 Protein of unknown function (DUF444) CA940_RS14145 PF04293 SpoVR like protein CA940_RS14155 PF02225 PA domain CA940_RS14155 PF04389 Peptidase family M28 CA940_RS14165 PF00580 UvrD/REP helicase N-terminal domain CA940_RS14165 PF13361 UvrD-like helicase C-terminal domain CA940_RS14170 PF01430 Hsp33 protein CA940_RS14185 PF03144 Elongation factor Tu domain 2 CA940_RS14185 PF00679 Elongation factor G C-terminus CA940_RS14185 PF00009 Elongation factor Tu GTP binding domain CA940_RS14190 PF01513 ATP-NAD kinase CA940_RS14195 PF02463 RecF/RecN/SMC N terminal domain CA940_RS14200 PF00313 'Cold-shock' DNA-binding domain CA940_RS14215 PF00873 AcrB/AcrD/AcrF family CA940_RS14235 PF04564 U-box domain CA940_RS14240 PF01734 Patatin-like phospholipase CA940_RS14240 PF00027 Cyclic nucleotide-binding domain CA940_RS14250 PF03061 Thioesterase superfamily CA940_RS14255 PF17674 HHH domain CA940_RS14255 PF09371 Tex-like protein N-terminal domain CA940_RS14255 PF16921 Tex protein YqgF-like domain CA940_RS14255 PF00575 S1 RNA binding domain CA940_RS14260 PF05724 Thiopurine S-methyltransferase (TPMT) CA940_RS14265 PF01380 SIS domain CA940_RS14275 PF17773 UPF0176 acylphosphatase like domain CA940_RS14275 PF00581 Rhodanese-like domain CA940_RS14280 PF01668 SmpB protein CA940_RS14285 PF00578 AhpC/TSA family CA940_RS14290 PF07690 Major Facilitator Superfamily CA940_RS14295 PF02562 PhoH-like protein CA940_RS14295 PF13638 PIN domain CA940_RS14300 PF00478 IMP dehydrogenase / GMP reductase domain CA940_RS14335 PF00313 'Cold-shock' DNA-binding domain CA940_RS14345 PF01425 Amidase CA940_RS14365 PF00092 von Willebrand factor type A domain CA940_RS14365 PF07584 Aerotolerance regulator N-terminal CA940_RS14375 PF01882 Protein of unknown function DUF58 CA940_RS14380 PF17863 AAA lid domain CA940_RS14380 PF07726 ATPase family associated with various cellular activities (AAA) CA940_RS14390 PF01207 Dihydrouridine synthase (Dus) CA940_RS14415 PF18074 Primosomal protein N C-terminal domain CA940_RS14415 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CA940_RS14415 PF00271 Helicase conserved C-terminal domain CA940_RS14415 PF00270 DEAD/DEAH box helicase CA940_RS14415 PF17764 3′ DNA-binding domain (3′BD) CA940_RS14430 PF00303 Thymidylate synthase CA940_RS14435 PF01790 Prolipoprotein diacylglyceryl transferase CA940_RS14440 PF01925 Sulfite exporter TauE/SafE CA940_RS14445 PF02896 PEP-utilising enzyme, TIM barrel domain CA940_RS14445 PF00391 PEP-utilising enzyme, mobile domain CA940_RS14445 PF05524 PEP-utilising enzyme, N-terminal CA940_RS14445 PF01590 GAF domain CA940_RS14455 PF00710 Asparaginase, N-terminal CA940_RS14455 PF17763 Glutaminase/Asparaginase C-terminal domain CA940_RS14465 PF12804 MobA-like NTP transferase domain CA940_RS14465 PF00132 Bacterial transferase hexapeptide (six repeats) CA940_RS14470 PF03600 Citrate transporter CA940_RS14480 PF01544 CorA-like Mg2+ transporter protein CA940_RS14490 PF00633 Helix-hairpin-helix motif CA940_RS14490 PF00730 HhH-GPD superfamily base excision DNA repair protein CA940_RS14490 PF10576 Iron-sulfur binding domain of endonuclease III CA940_RS14495 PF04060 Putative Fe-S cluster CA940_RS14500 PF01588 Putative tRNA binding domain CA940_RS14500 PF09334 tRNA synthetases class I (M) CA940_RS14505 PF02441 Flavoprotein CA940_RS14520 PF06508 Queuosine biosynthesis protein QueC CA940_RS14525 PF00483 Nucleotidyl transferase CA940_RS14525 PF01050 Mannose-6-phosphate isomerase CA940_RS14535 PF01134 Glucose inhibited division protein A CA940_RS14535 PF13932 GidA associated domain CA940_RS14540 PF02527 rRNA small subunit methyltransferase G CA940_RS14545 PF13614 AAA domain CA940_RS14550 PF02195 ParB-like nuclease domain CA940_RS14550 PF17762 HTH domain found in ParB protein CA940_RS14565 PF00510 Cytochrome c oxidase subunit III CA940_RS14570 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 CA940_RS14575 PF00115 Cytochrome C and Quinol oxidase polypeptide I CA940_RS14580 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CA940_RS14580 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CA940_RS14585 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CA940_RS14585 PF00034 Cytochrome c CA940_RS14605 PF01810 LysE type translocator CA940_RS14615 PF01209 ubiE/COQ5 methyltransferase family CA940_RS14630 PF03109 ABC1 family CA940_RS14635 PF02416 mttA/Hcf106 family CA940_RS14655 PF01625 Peptide methionine sulfoxide reductase CA940_RS14655 PF01641 SelR domain CA940_RS14670 PF01179 Copper amine oxidase, enzyme domain CA940_RS14670 PF02728 Copper amine oxidase, N3 domain CA940_RS14710 PF00529 HlyD membrane-fusion protein of T1SS CA940_RS14710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CA940_RS14715 PF00664 ABC transporter transmembrane region CA940_RS14715 PF00005 ABC transporter CA940_RS14715 PF03412 Peptidase C39 family CA940_RS14745 PF02687 FtsX-like permease family CA940_RS14745 PF12704 MacB-like periplasmic core domain CA940_RS14745 PF00005 ABC transporter CA940_RS14750 PF00005 ABC transporter CA940_RS14750 PF02687 FtsX-like permease family CA940_RS14750 PF12704 MacB-like periplasmic core domain CA940_RS14765 PF00149 Calcineurin-like phosphoesterase CA940_RS14775 PF00398 Ribosomal RNA adenine dimethylase CA940_RS14780 PF02261 Aspartate decarboxylase CA940_RS14785 PF00902 Sec-independent protein translocase protein (TatC) CA940_RS14800 PF00970 Oxidoreductase FAD-binding domain CA940_RS14800 PF00111 2Fe-2S iron-sulfur cluster binding domain CA940_RS14800 PF00175 Oxidoreductase NAD-binding domain CA940_RS14805 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CA940_RS14810 PF07497 Rho termination factor, RNA-binding domain CA940_RS14810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CA940_RS14810 PF07498 Rho termination factor, N-terminal domain CA940_RS14815 PF00085 Thioredoxin CA940_RS14820 PF04452 RNA methyltransferase CA940_RS14825 PF10415 Fumarase C C-terminus CA940_RS14825 PF00206 Lyase CA940_RS14830 PF03279 Bacterial lipid A biosynthesis acyltransferase CA940_RS14845 PF00132 Bacterial transferase hexapeptide (six repeats) CA940_RS14845 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 CA940_RS14850 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD CA940_RS14850 PF00132 Bacterial transferase hexapeptide (six repeats) CA940_RS14855 PF02684 Lipid-A-disaccharide synthetase CA940_RS14865 PF00005 ABC transporter CA940_RS14865 PF00664 ABC transporter transmembrane region CA940_RS14900 PF00291 Pyridoxal-phosphate dependent enzyme CA940_RS14900 PF00571 CBS domain CA940_RS14920 PF00216 Bacterial DNA-binding protein CA940_RS14925 PF00692 dUTPase CA940_RS14930 PF01145 SPFH domain / Band 7 family CA940_RS14930 PF16200 C-terminal region of band_7 CA940_RS14965 PF00691 OmpA family CA940_RS14965 PF01389 OmpA-like transmembrane domain CA940_RS14970 PF01979 Amidohydrolase family CA940_RS14975 PF00929 Exonuclease CA940_RS14980 PF10417 C-terminal domain of 1-Cys peroxiredoxin CA940_RS14980 PF00578 AhpC/TSA family CA940_RS14985 PF00462 Glutaredoxin CA940_RS14990 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CA940_RS14990 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CA940_RS14995 PF00202 Aminotransferase class-III CA940_RS15000 PF00753 Metallo-beta-lactamase superfamily CA940_RS15010 PF00390 Malic enzyme, N-terminal domain CA940_RS15010 PF03949 Malic enzyme, NAD binding domain CA940_RS15015 PF01300 Telomere recombination CA940_RS15025 PF02666 Phosphatidylserine decarboxylase CA940_RS15040 PF01447 Thermolysin metallopeptidase, catalytic domain CA940_RS15040 PF04151 Bacterial pre-peptidase C-terminal domain CA940_RS15040 PF02868 Thermolysin metallopeptidase, alpha-helical domain CA940_RS15040 PF03413 Peptidase propeptide and YPEB domain CA940_RS15040 PF07504 Fungalysin/Thermolysin Propeptide Motif CA940_RS15050 PF00521 DNA gyrase/topoisomerase IV, subunit A CA940_RS15050 PF03989 DNA gyrase C-terminal domain, beta-propeller CA940_RS15055 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CA940_RS15055 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CA940_RS15060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CA940_RS15060 PF02874 ATP synthase alpha/beta family, beta-barrel domain CA940_RS15065 PF00231 ATP synthase CA940_RS15070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CA940_RS15070 PF00306 ATP synthase alpha/beta chain, C terminal domain CA940_RS15070 PF02874 ATP synthase alpha/beta family, beta-barrel domain CA940_RS15075 PF00213 ATP synthase delta (OSCP) subunit CA940_RS15080 PF00430 ATP synthase B/B' CF(0) CA940_RS15085 PF00137 ATP synthase subunit C CA940_RS15090 PF00119 ATP synthase A chain CA940_RS15095 PF03899 ATP synthase I chain CA940_RS15105 PF04972 BON domain CA940_RS15110 PF04972 BON domain CA940_RS15115 PF13580 SIS domain CA940_RS15120 PF02021 Uncharacterised protein family UPF0102 CA940_RS15125 PF04348 LppC putative lipoprotein CA940_RS15130 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CA940_RS15135 PF00487 Fatty acid desaturase CA940_RS15160 PF01926 50S ribosome-binding GTPase CA940_RS15160 PF12631 MnmE helical domain CA940_RS15160 PF10396 GTP-binding protein TrmE N-terminus CA940_RS15165 PF02096 60Kd inner membrane protein CA940_RS15165 PF14849 YidC periplasmic domain CA940_RS15170 PF01809 Putative membrane protein insertion efficiency factor CA940_RS15175 PF00825 Ribonuclease P CA940_RS15180 PF00468 Ribosomal protein L34 CA940_RS15195 PF06122 Conjugative relaxosome accessory transposon protein CA940_RS15210 PF12615 F sex factor protein N terminal CA940_RS15210 PF10412 Type IV secretion-system coupling protein DNA-binding domain CA940_RS15215 PF07057 DNA helicase TraI CA940_RS15215 PF18340 DNA relaxase TraI 2B/2B-like domain CA940_RS15215 PF08751 TrwC relaxase CA940_RS15215 PF18272 single-stranded DNA binding TraI N-terminal subdomain CA940_RS15230 PF13443 Cro/C1-type HTH DNA-binding domain CA940_RS15240 PF02796 Helix-turn-helix domain of resolvase CA940_RS15240 PF00239 Resolvase, N terminal domain CA940_RS15245 PF13700 Domain of unknown function (DUF4158) CA940_RS15245 PF01526 Tn3 transposase DDE domain CA940_RS15260 PF07883 Cupin domain CA940_RS15290 PF00239 Resolvase, N terminal domain CA940_RS15290 PF02796 Helix-turn-helix domain of resolvase CA940_RS15300 PF02481 DNA recombination-mediator protein A CA940_RS15300 PF18255 DNA processing protein A sterile alpha motif domain CA940_RS15315 PF00239 Resolvase, N terminal domain CA940_RS15315 PF02796 Helix-turn-helix domain of resolvase CA940_RS15320 PF13438 Domain of unknown function (DUF4113) CA940_RS15320 PF11799 impB/mucB/samB family C-terminal domain CA940_RS15320 PF00817 impB/mucB/samB family CA940_RS15325 PF00717 Peptidase S24-like CA940_RS15330 PF02586 SOS response associated peptidase (SRAP) CA940_RS15335 PF13614 AAA domain CA940_RS15345 PF00854 POT family CA940_RS15375 PF00899 ThiF family CA940_RS15380 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding CA940_RS15395 PF02599 Global regulator protein family CA940_RS15400 PF05818 Enterobacterial TraT complement resistance protein CA940_RS15425 PF03743 Bacterial conjugation TrbI-like protein CA940_RS15430 PF09676 Type IV conjugative transfer system lipoprotein (TraV) CA940_RS15435 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer CA940_RS15450 PF06834 TraU protein CA940_RS15460 PF06986 Type-1V conjugative transfer system mating pair stabilisation