CA940_RS00005 SM00382 ATPases associated with a variety of cellular activities CA940_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain CA940_RS00010 SM00480 DNA polymerase III beta subunit CA940_RS00020 SM00387 Histidine kinase-like ATPases CA940_RS00020 SM00433 TopoisomeraseII CA940_RS00115 SM00981 CA940_RS00115 CA940_RS00185 SM00062 Bacterial periplasmic substrate-binding proteins CA940_RS00190 SM00248 ankyrin repeats CA940_RS00330 SM00487 DEAD-like helicases superfamily CA940_RS00330 SM00490 helicase superfamily c-terminal domain CA940_RS00340 SM00052 Putative diguanylate phosphodiesterase CA940_RS00340 SM00267 diguanylate cyclase CA940_RS00360 SM01011 Aminopeptidase P, N-terminal domain CA940_RS00420 SM00062 Bacterial periplasmic substrate-binding proteins CA940_RS00440 SM00316 Ribosomal protein S1-like RNA-binding domain CA940_RS00440 SM00357 Cold shock protein domain CA940_RS00440 SM00955 CA940_RS00440 CA940_RS00445 SM00967 RNA 2'-O ribose methyltransferase substrate binding CA940_RS00480 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CA940_RS00480 SM00474 3'-5' exonuclease CA940_RS00480 SM00475 5'-3' exonuclease CA940_RS00480 SM00482 DNA polymerase A domain CA940_RS00495 SM00825 Beta-ketoacyl synthase CA940_RS00545 SM00052 Putative diguanylate phosphodiesterase CA940_RS00590 SM00382 ATPases associated with a variety of cellular activities CA940_RS00650 SM00945 ProQ/FINO family CA940_RS00675 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CA940_RS00680 SM00861 Transketolase, pyrimidine binding domain CA940_RS00705 SM00382 ATPases associated with a variety of cellular activities CA940_RS00730 SM00421 helix_turn_helix, Lux Regulon CA940_RS00735 SM00248 ankyrin repeats CA940_RS00740 SM01321 CA940_RS00740 CA940_RS00835 SM00256 A Receptor for Ubiquitination Targets CA940_RS00930 SM00382 ATPases associated with a variety of cellular activities CA940_RS01020 SM00220 Serine/Threonine protein kinases, catalytic domain CA940_RS01070 SM01001 AIR carboxylase CA940_RS01130 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CA940_RS01130 SM00267 diguanylate cyclase CA940_RS01260 SM00487 DEAD-like helicases superfamily CA940_RS01260 SM00490 helicase superfamily c-terminal domain CA940_RS01265 SM00360 RNA recognition motif CA940_RS01315 SM00465 GIY-YIG type nucleases (URI domain) CA940_RS01325 SM00986 Uracil DNA glycosylase superfamily CA940_RS01325 SM00987 UreE urease accessory protein, C-terminal domain CA940_RS01335 SM00644 CA940_RS01335 CA940_RS01355 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CA940_RS01415 SM00052 Putative diguanylate phosphodiesterase CA940_RS01415 SM00091 PAS domain CA940_RS01415 SM00267 diguanylate cyclase CA940_RS01420 SM00387 Histidine kinase-like ATPases CA940_RS01475 SM00841 Elongation factor P, C-terminal CA940_RS01475 SM01185 CA940_RS01475 CA940_RS01545 SM00696 Repeats found in Drosophila proteins. CA940_RS01605 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CA940_RS01605 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CA940_RS01610 SM00649 Ribosomal protein L11/L12 CA940_RS01635 SM00663 RNA polymerase I subunit A N-terminus CA940_RS01650 SM00838 Elongation factor G C-terminus CA940_RS01650 SM00889 Elongation factor G, domain IV CA940_RS01660 SM01403 CA940_RS01660 CA940_RS01680 SM01382 CA940_RS01680 CA940_RS01680 SM01383 CA940_RS01680 CA940_RS01695 SM00322 K homology RNA-binding domain CA940_RS01715 SM01374 CA940_RS01715 CA940_RS01720 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CA940_RS01785 SM00363 S4 RNA-binding domain CA940_RS01785 SM01390 CA940_RS01785 CA940_RS01790 SM00662 RNA polymerases D CA940_RS01825 SM00825 Beta-ketoacyl synthase CA940_RS01890 SM00267 diguanylate cyclase CA940_RS01935 SM00749 bacterial OsmY and nodulation domain CA940_RS01970 SM00382 ATPases associated with a variety of cellular activities CA940_RS01985 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. CA940_RS02030 SM00382 ATPases associated with a variety of cellular activities CA940_RS02030 SM00962 SRP54-type protein, GTPase domain CA940_RS02030 SM00963 SRP54-type protein, helical bundle domain CA940_RS02040 SM00248 ankyrin repeats CA940_RS02145 SM00530 Helix-turn-helix XRE-family like proteins CA940_RS02160 SM00357 Cold shock protein domain CA940_RS02210 SM00248 ankyrin repeats CA940_RS02310 SM00507 HNH nucleases CA940_RS02335 SM00798 AICARFT/IMPCHase bienzyme CA940_RS02335 SM00851 MGS-like domain CA940_RS02345 SM00878 Biotin carboxylase C-terminal domain CA940_RS02455 SM00244 prohibitin homologues CA940_RS02460 SM00244 prohibitin homologues CA940_RS02465 SM00788 Adenylosuccinate synthetase CA940_RS02480 SM00062 Bacterial periplasmic substrate-binding proteins CA940_RS02480 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CA940_RS02490 SM00382 ATPases associated with a variety of cellular activities CA940_RS02520 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CA940_RS02520 SM00245 tail specific protease CA940_RS02555 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CA940_RS02565 SM00935 Outer membrane protein (OmpH-like) CA940_RS02690 SM00861 Transketolase, pyrimidine binding domain CA940_RS02705 SM00881 CoA binding domain CA940_RS02740 SM01400 CA940_RS02740 CA940_RS02775 SM00100 Cyclic nucleotide-monophosphate binding domain CA940_RS02780 SM00563 Phosphate acyltransferases CA940_RS02790 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CA940_RS02790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CA940_RS02820 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CA940_RS02820 SM01232 CA940_RS02820 CA940_RS02845 SM00822 CA940_RS02845 CA940_RS02880 SM00363 S4 RNA-binding domain CA940_RS02945 SM00732 Likely ribonuclease with RNase H fold. CA940_RS02965 SM00382 ATPases associated with a variety of cellular activities CA940_RS02975 SM00938 Nitrogen regulatory protein P-II CA940_RS03000 SM00563 Phosphate acyltransferases CA940_RS03025 SM00382 ATPases associated with a variety of cellular activities CA940_RS03060 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CA940_RS03070 SM01091 Transporter associated domain CA940_RS03075 SM00829 Enoylreductase CA940_RS03105 SM00881 CoA binding domain CA940_RS03110 SM00422 helix_turn_helix, mercury resistance CA940_RS03245 SM00382 ATPases associated with a variety of cellular activities CA940_RS03245 SM01086 C-terminal, D2-small domain, of ClpB protein CA940_RS03300 SM00919 Malic enzyme, NAD binding domain CA940_RS03300 SM01274 CA940_RS03300 CA940_RS03345 SM00382 ATPases associated with a variety of cellular activities CA940_RS03425 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CA940_RS03445 SM00062 Bacterial periplasmic substrate-binding proteins CA940_RS03465 SM00382 ATPases associated with a variety of cellular activities CA940_RS03475 SM00729 Elongator protein 3, MiaB family, Radical SAM CA940_RS03485 SM00883 Chaperonin 10 Kd subunit CA940_RS03505 SM00387 Histidine kinase-like ATPases CA940_RS03505 SM00433 TopoisomeraseII CA940_RS03510 SM00382 ATPases associated with a variety of cellular activities CA940_RS03540 SM00947 Carbonic anhydrase CA940_RS03565 SM00829 Enoylreductase CA940_RS03570 SM00382 ATPases associated with a variety of cellular activities CA940_RS03605 SM00822 CA940_RS03605 CA940_RS03625 SM00387 Histidine kinase-like ATPases CA940_RS03625 SM00388 His Kinase A (phosphoacceptor) domain CA940_RS03630 SM00448 cheY-homologous receiver domain CA940_RS03630 SM00862 Transcriptional regulatory protein, C terminal CA940_RS03675 SM00749 bacterial OsmY and nodulation domain CA940_RS03730 SM00487 DEAD-like helicases superfamily CA940_RS03730 SM00490 helicase superfamily c-terminal domain CA940_RS03740 SM00382 ATPases associated with a variety of cellular activities CA940_RS03745 SM01005 Alanine racemase, C-terminal domain CA940_RS03755 SM00116 Domain in cystathionine beta-synthase and other proteins. CA940_RS03770 SM00267 diguanylate cyclase CA940_RS03775 SM00729 Elongator protein 3, MiaB family, Radical SAM CA940_RS03780 SM00465 GIY-YIG type nucleases (URI domain) CA940_RS03820 SM00858 CA940_RS03820 CA940_RS03845 SM00382 ATPases associated with a variety of cellular activities CA940_RS03950 SM00858 CA940_RS03950 CA940_RS04015 SM00858 CA940_RS04015 CA940_RS04100 SM00849 Metallo-beta-lactamase superfamily CA940_RS04125 SM00977 TilS substrate C-terminal domain CA940_RS04130 SM01321 CA940_RS04130 CA940_RS04265 SM01329 CA940_RS04265 CA940_RS04275 SM00382 ATPases associated with a variety of cellular activities CA940_RS04275 SM01086 C-terminal, D2-small domain, of ClpB protein CA940_RS04320 SM00052 Putative diguanylate phosphodiesterase CA940_RS04320 SM00267 diguanylate cyclase CA940_RS04320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CA940_RS04335 SM00052 Putative diguanylate phosphodiesterase CA940_RS04335 SM00267 diguanylate cyclase CA940_RS04335 SM00448 cheY-homologous receiver domain CA940_RS04340 SM00387 Histidine kinase-like ATPases CA940_RS04370 SM00382 ATPases associated with a variety of cellular activities CA940_RS04390 SM00116 Domain in cystathionine beta-synthase and other proteins. CA940_RS04395 SM00382 ATPases associated with a variety of cellular activities CA940_RS04435 SM00382 ATPases associated with a variety of cellular activities CA940_RS04455 SM00382 ATPases associated with a variety of cellular activities CA940_RS04470 SM00382 ATPases associated with a variety of cellular activities CA940_RS04510 SM00028 Tetratricopeptide repeats CA940_RS04530 SM00341 Helicase and RNase D C-terminal CA940_RS04530 SM00487 DEAD-like helicases superfamily CA940_RS04530 SM00490 helicase superfamily c-terminal domain CA940_RS04530 SM00956 CA940_RS04530 CA940_RS04580 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CA940_RS04580 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CA940_RS04595 SM00267 diguanylate cyclase CA940_RS04640 SM00563 Phosphate acyltransferases CA940_RS04650 SM00052 Putative diguanylate phosphodiesterase CA940_RS04650 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CA940_RS04650 SM00091 PAS domain CA940_RS04650 SM00267 diguanylate cyclase CA940_RS04675 SM00671 Sel1-like repeats. CA940_RS04690 SM00478 endonuclease III CA940_RS04715 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CA940_RS04740 SM00858 CA940_RS04740 CA940_RS04795 SM00014 Acid phosphatase homologues CA940_RS04805 SM00893 Electron transfer flavoprotein domain CA940_RS04810 SM00893 Electron transfer flavoprotein domain CA940_RS04815 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CA940_RS04815 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CA940_RS04830 SM00842 Cell division protein FtsA CA940_RS04850 SM00965 Secretin and TonB N terminus short domain CA940_RS04875 SM00904 Riboflavin kinase CA940_RS04955 SM00487 DEAD-like helicases superfamily CA940_RS04955 SM00490 helicase superfamily c-terminal domain CA940_RS04955 SM00982 CA940_RS04955 CA940_RS04955 SM01058 CarD-like/TRCF domain CA940_RS04975 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CA940_RS04975 SM00292 breast cancer carboxy-terminal domain CA940_RS04975 SM00532 Ligase N family CA940_RS05250 SM00530 Helix-turn-helix XRE-family like proteins CA940_RS05260 SM00671 Sel1-like repeats. CA940_RS05310 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CA940_RS05340 SM00357 Cold shock protein domain CA940_RS05345 SM00822 CA940_RS05345 CA940_RS05360 SM00530 Helix-turn-helix XRE-family like proteins CA940_RS05370 SM00989 CA940_RS05370 CA940_RS05375 SM00052 Putative diguanylate phosphodiesterase CA940_RS05375 SM00267 diguanylate cyclase CA940_RS05505 SM00885 D5 N terminal like CA940_RS05550 SM01006 Siderophore biosynthesis protein domain CA940_RS05675 SM00636 CA940_RS05675 CA940_RS05710 SM00257 Lysin motif CA940_RS05715 SM00062 Bacterial periplasmic substrate-binding proteins CA940_RS05725 SM00062 Bacterial periplasmic substrate-binding proteins CA940_RS05725 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CA940_RS05755 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CA940_RS05755 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CA940_RS05815 SM00382 ATPases associated with a variety of cellular activities CA940_RS05855 SM00342 helix_turn_helix, arabinose operon control protein CA940_RS05955 SM00052 Putative diguanylate phosphodiesterase CA940_RS05955 SM00267 diguanylate cyclase CA940_RS05975 SM00671 Sel1-like repeats. CA940_RS05980 SM00387 Histidine kinase-like ATPases CA940_RS05980 SM00388 His Kinase A (phosphoacceptor) domain CA940_RS05985 SM00382 ATPases associated with a variety of cellular activities CA940_RS05985 SM00448 cheY-homologous receiver domain CA940_RS06070 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CA940_RS06150 SM00357 Cold shock protein domain CA940_RS06165 SM00347 helix_turn_helix multiple antibiotic resistance protein CA940_RS06185 SM00347 helix_turn_helix multiple antibiotic resistance protein CA940_RS06270 SM00047 Lysozyme subfamily 2 CA940_RS06315 SM00382 ATPases associated with a variety of cellular activities CA940_RS06330 SM00919 Malic enzyme, NAD binding domain CA940_RS06330 SM01274 CA940_RS06330 CA940_RS06345 SM00257 Lysin motif CA940_RS06370 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CA940_RS06380 SM00387 Histidine kinase-like ATPases CA940_RS06380 SM00388 His Kinase A (phosphoacceptor) domain CA940_RS06385 SM00448 cheY-homologous receiver domain CA940_RS06385 SM00862 Transcriptional regulatory protein, C terminal CA940_RS06395 SM00257 Lysin motif CA940_RS06400 SM00849 Metallo-beta-lactamase superfamily CA940_RS06465 SM00840 CA940_RS06465 CA940_RS06480 SM00382 ATPases associated with a variety of cellular activities CA940_RS06495 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CA940_RS06530 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CA940_RS06540 SM00363 S4 RNA-binding domain CA940_RS06545 SM00729 Elongator protein 3, MiaB family, Radical SAM CA940_RS06655 SM00671 Sel1-like repeats. CA940_RS06660 SM00052 Putative diguanylate phosphodiesterase CA940_RS06660 SM00091 PAS domain CA940_RS06660 SM00267 diguanylate cyclase CA940_RS06695 SM01230 CA940_RS06695 CA940_RS06720 SM00387 Histidine kinase-like ATPases CA940_RS06800 SM00479 CA940_RS06800 CA940_RS06855 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CA940_RS06870 SM00825 Beta-ketoacyl synthase CA940_RS06970 SM00434 DNA Topoisomerase IV CA940_RS06990 SM00316 Ribosomal protein S1-like RNA-binding domain CA940_RS07000 SM00028 Tetratricopeptide repeats CA940_RS07010 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CA940_RS07050 SM01133 CA940_RS07050 CA940_RS07070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CA940_RS07070 SM00387 Histidine kinase-like ATPases CA940_RS07070 SM00388 His Kinase A (phosphoacceptor) domain CA940_RS07075 SM00448 cheY-homologous receiver domain CA940_RS07075 SM00862 Transcriptional regulatory protein, C terminal CA940_RS07080 SM00116 Domain in cystathionine beta-synthase and other proteins. CA940_RS07080 SM01091 Transporter associated domain CA940_RS07095 SM00481 DNA polymerase alpha chain like domain CA940_RS07120 SM00363 S4 RNA-binding domain CA940_RS07125 SM00421 helix_turn_helix, Lux Regulon CA940_RS07180 SM00954 Region found in RelA / SpoT proteins CA940_RS07210 SM00957 SecA DEAD-like domain CA940_RS07210 SM00958 SecA preprotein cross-linking domain CA940_RS07240 SM00052 Putative diguanylate phosphodiesterase CA940_RS07255 SM00729 Elongator protein 3, MiaB family, Radical SAM CA940_RS07255 SM00876 Biotin and Thiamin Synthesis associated domain CA940_RS07275 SM00834 Putative regulatory protein CA940_RS07295 SM00927 DNA mismatch repair enzyme MutH CA940_RS07310 SM00220 Serine/Threonine protein kinases, catalytic domain CA940_RS07325 SM00344 helix_turn_helix ASNC type CA940_RS07345 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain CA940_RS07345 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CA940_RS07490 SM00936 Penicillin-binding protein 5, C-terminal domain CA940_RS07525 SM00382 ATPases associated with a variety of cellular activities CA940_RS07655 SM00564 beta-propeller repeat CA940_RS07675 SM00028 Tetratricopeptide repeats CA940_RS07685 SM00562 CA940_RS07685 CA940_RS07720 SM00062 Bacterial periplasmic substrate-binding proteins CA940_RS07740 SM00861 Transketolase, pyrimidine binding domain CA940_RS07815 SM00450 Rhodanese Homology Domain CA940_RS07850 SM00382 ATPases associated with a variety of cellular activities CA940_RS07995 SM00953 CA940_RS07995 CA940_RS08025 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase CA940_RS08040 SM00422 helix_turn_helix, mercury resistance CA940_RS08045 SM00422 helix_turn_helix, mercury resistance CA940_RS08060 SM00382 ATPases associated with a variety of cellular activities CA940_RS08065 SM00382 ATPases associated with a variety of cellular activities CA940_RS08135 SM00849 Metallo-beta-lactamase superfamily CA940_RS08210 SM00867 YceI-like domain CA940_RS08220 SM00867 YceI-like domain CA940_RS08255 SM00028 Tetratricopeptide repeats CA940_RS08310 SM01359 CA940_RS08310 CA940_RS08310 SM01360 CA940_RS08310 CA940_RS08330 SM00642 Alpha-amylase domain CA940_RS08350 SM01209 CA940_RS08350 CA940_RS08350 SM01210 CA940_RS08350 CA940_RS08365 SM01211 CA940_RS08365 CA940_RS08460 SM00945 ProQ/FINO family CA940_RS08555 SM00248 ankyrin repeats CA940_RS08555 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain CA940_RS08565 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CA940_RS08580 SM00116 Domain in cystathionine beta-synthase and other proteins. CA940_RS08580 SM01240 CA940_RS08580 CA940_RS08610 SM00382 ATPases associated with a variety of cellular activities CA940_RS08625 SM00829 Enoylreductase CA940_RS08650 SM00845 GatB domain CA940_RS08695 SM00382 ATPases associated with a variety of cellular activities CA940_RS08695 SM01086 C-terminal, D2-small domain, of ClpB protein CA940_RS08730 SM00382 ATPases associated with a variety of cellular activities CA940_RS08755 SM00382 ATPases associated with a variety of cellular activities CA940_RS08755 SM00448 cheY-homologous receiver domain CA940_RS08760 SM00387 Histidine kinase-like ATPases CA940_RS08760 SM00388 His Kinase A (phosphoacceptor) domain CA940_RS08765 SM00382 ATPases associated with a variety of cellular activities CA940_RS08775 SM00843 CA940_RS08775 CA940_RS08790 SM00450 Rhodanese Homology Domain CA940_RS08795 SM00316 Ribosomal protein S1-like RNA-binding domain CA940_RS08865 SM00382 ATPases associated with a variety of cellular activities CA940_RS08865 SM00962 SRP54-type protein, GTPase domain CA940_RS08940 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CA940_RS08950 SM00382 ATPases associated with a variety of cellular activities CA940_RS08975 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CA940_RS08975 SM00534 ATPase domain of DNA mismatch repair MUTS family CA940_RS08990 SM01004 Delta-aminolevulinic acid dehydratase CA940_RS09045 SM00382 ATPases associated with a variety of cellular activities CA940_RS09095 SM00878 Biotin carboxylase C-terminal domain CA940_RS09115 SM00382 ATPases associated with a variety of cellular activities CA940_RS09115 SM00930 CA940_RS09115 CA940_RS09145 SM00836 DALR anticodon binding domain CA940_RS09205 SM00450 Rhodanese Homology Domain CA940_RS09250 SM00411 bacterial (prokaryotic) histone like domain CA940_RS09255 SM00382 ATPases associated with a variety of cellular activities CA940_RS09255 SM00464 Found in ATP-dependent protease La (LON) CA940_RS09260 SM00382 ATPases associated with a variety of cellular activities CA940_RS09260 SM00994 ClpX C4-type zinc finger CA940_RS09260 SM01086 C-terminal, D2-small domain, of ClpB protein CA940_RS09300 SM00382 ATPases associated with a variety of cellular activities CA940_RS09305 SM00358 Double-stranded RNA binding motif CA940_RS09305 SM00535 Ribonuclease III family CA940_RS09320 SM00838 Elongation factor G C-terminus CA940_RS09345 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CA940_RS09390 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain CA940_RS09415 SM00155 Phospholipase D. Active site motifs. CA940_RS09480 SM00460 Transglutaminase/protease-like homologues CA940_RS09540 SM00073 Histidine Phosphotransfer domain CA940_RS09540 SM00387 Histidine kinase-like ATPases CA940_RS09540 SM00388 His Kinase A (phosphoacceptor) domain CA940_RS09540 SM00448 cheY-homologous receiver domain CA940_RS09590 SM00487 DEAD-like helicases superfamily CA940_RS09590 SM00491 CA940_RS09590 CA940_RS09645 SM00387 Histidine kinase-like ATPases CA940_RS09645 SM00388 His Kinase A (phosphoacceptor) domain CA940_RS09650 SM00248 ankyrin repeats CA940_RS09655 SM00448 cheY-homologous receiver domain CA940_RS09655 SM00862 Transcriptional regulatory protein, C terminal CA940_RS09680 SM00530 Helix-turn-helix XRE-family like proteins CA940_RS09710 SM00825 Beta-ketoacyl synthase CA940_RS09765 SM00222 Sec7 domain CA940_RS09810 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain CA940_RS09815 SM00267 diguanylate cyclase CA940_RS09820 SM00091 PAS domain CA940_RS09885 SM00345 helix_turn_helix gluconate operon transcriptional repressor CA940_RS09885 SM00895 CA940_RS09885 CA940_RS10025 SM00925 MltA specific insert domain CA940_RS10065 SM01323 CA940_RS10065 CA940_RS10085 SM00382 ATPases associated with a variety of cellular activities CA940_RS10100 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CA940_RS10100 SM00954 Region found in RelA / SpoT proteins CA940_RS10105 SM01409 CA940_RS10105 CA940_RS10110 SM00072 Guanylate kinase homologues. CA940_RS10160 SM00342 helix_turn_helix, arabinose operon control protein CA940_RS10165 SM00996 S-adenosyl-L-homocysteine hydrolase CA940_RS10165 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CA940_RS10175 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CA940_RS10180 SM00271 DnaJ molecular chaperone homology domain CA940_RS10205 SM00905 Dihydroneopterin aldolase CA940_RS10215 SM00836 DALR anticodon binding domain CA940_RS10215 SM01016 Arginyl tRNA synthetase N terminal dom CA940_RS10230 SM00487 DEAD-like helicases superfamily CA940_RS10230 SM00490 helicase superfamily c-terminal domain CA940_RS10250 SM01192 CA940_RS10250 CA940_RS10250 SM01193 CA940_RS10250 CA940_RS10275 SM00028 Tetratricopeptide repeats CA940_RS10295 SM00382 ATPases associated with a variety of cellular activities CA940_RS10400 SM00530 Helix-turn-helix XRE-family like proteins CA940_RS10420 SM00382 ATPases associated with a variety of cellular activities CA940_RS10560 SM00382 ATPases associated with a variety of cellular activities CA940_RS10565 SM00100 Cyclic nucleotide-monophosphate binding domain CA940_RS10575 SM00357 Cold shock protein domain CA940_RS10580 SM00487 DEAD-like helicases superfamily CA940_RS10580 SM00490 helicase superfamily c-terminal domain CA940_RS10595 SM00248 ankyrin repeats CA940_RS10600 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CA940_RS10600 SM00091 PAS domain CA940_RS10600 SM00267 diguanylate cyclase CA940_RS10665 SM00448 cheY-homologous receiver domain CA940_RS10670 SM00091 PAS domain CA940_RS10670 SM00387 Histidine kinase-like ATPases CA940_RS10670 SM00388 His Kinase A (phosphoacceptor) domain CA940_RS10670 SM00448 cheY-homologous receiver domain CA940_RS10700 SM00382 ATPases associated with a variety of cellular activities CA940_RS10760 SM00342 helix_turn_helix, arabinose operon control protein CA940_RS10760 SM00871 Bacterial transcription activator, effector binding domain CA940_RS10805 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CA940_RS10840 SM00822 CA940_RS10840 CA940_RS10840 SM00823 Phosphopantetheine attachment site CA940_RS10840 SM00825 Beta-ketoacyl synthase CA940_RS10840 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CA940_RS10845 SM00387 Histidine kinase-like ATPases CA940_RS10845 SM00388 His Kinase A (phosphoacceptor) domain CA940_RS10845 SM00448 cheY-homologous receiver domain CA940_RS10850 SM00448 cheY-homologous receiver domain CA940_RS10870 SM00822 CA940_RS10870 CA940_RS10870 SM00823 Phosphopantetheine attachment site CA940_RS10870 SM00825 Beta-ketoacyl synthase CA940_RS10870 SM00826 CA940_RS10870 CA940_RS10910 SM00947 Carbonic anhydrase CA940_RS10980 SM00829 Enoylreductase CA940_RS10990 SM01324 CA940_RS10990 CA940_RS11050 SM00671 Sel1-like repeats. CA940_RS11130 SM00382 ATPases associated with a variety of cellular activities CA940_RS11210 SM01230 CA940_RS11210 CA940_RS11230 SM00849 Metallo-beta-lactamase superfamily CA940_RS11230 SM01027 Beta-Casp domain CA940_RS11265 SM00271 DnaJ molecular chaperone homology domain CA940_RS11275 SM00563 Phosphate acyltransferases CA940_RS11335 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CA940_RS11375 SM00382 ATPases associated with a variety of cellular activities CA940_RS11390 SM00530 Helix-turn-helix XRE-family like proteins CA940_RS11450 SM00363 S4 RNA-binding domain CA940_RS11465 SM00316 Ribosomal protein S1-like RNA-binding domain CA940_RS11475 SM00487 DEAD-like helicases superfamily CA940_RS11475 SM00490 helicase superfamily c-terminal domain CA940_RS11480 SM00248 ankyrin repeats CA940_RS11490 SM00859 Semialdehyde dehydrogenase, NAD binding domain CA940_RS11505 SM00463 Small MutS-related domain CA940_RS11510 SM00450 Rhodanese Homology Domain CA940_RS11545 SM01154 CA940_RS11545 CA940_RS11555 SM01130 CA940_RS11555 CA940_RS11605 SM00382 ATPases associated with a variety of cellular activities CA940_RS11620 SM00382 ATPases associated with a variety of cellular activities CA940_RS11670 SM00937 CA940_RS11670 CA940_RS11695 SM00271 DnaJ molecular chaperone homology domain CA940_RS11720 SM00487 DEAD-like helicases superfamily CA940_RS11720 SM00490 helicase superfamily c-terminal domain CA940_RS11770 SM00729 Elongator protein 3, MiaB family, Radical SAM CA940_RS11780 SM01207 CA940_RS11780 CA940_RS11800 SM00400 zinc finger CA940_RS11800 SM00493 CA940_RS11800 CA940_RS11800 SM00766 DNA primase DnaG DnaB-binding CA940_RS11865 SM00530 Helix-turn-helix XRE-family like proteins CA940_RS11900 SM00829 Enoylreductase CA940_RS12125 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CA940_RS12125 SM00267 diguanylate cyclase CA940_RS12160 SM00248 ankyrin repeats CA940_RS12345 SM00248 ankyrin repeats CA940_RS12375 SM00448 cheY-homologous receiver domain CA940_RS12380 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) CA940_RS12380 SM00091 PAS domain CA940_RS12380 SM00387 Histidine kinase-like ATPases CA940_RS12380 SM00388 His Kinase A (phosphoacceptor) domain CA940_RS12445 SM00028 Tetratricopeptide repeats CA940_RS12445 SM00671 Sel1-like repeats. CA940_RS12485 SM00116 Domain in cystathionine beta-synthase and other proteins. CA940_RS12525 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CA940_RS12555 SM00947 Carbonic anhydrase CA940_RS12585 SM00387 Histidine kinase-like ATPases CA940_RS12590 SM01236 CA940_RS12590 CA940_RS12640 SM00344 helix_turn_helix ASNC type CA940_RS12665 SM01119 CA940_RS12665 CA940_RS12675 SM00421 helix_turn_helix, Lux Regulon CA940_RS12690 SM00642 Alpha-amylase domain CA940_RS12735 SM00830 Chorismate mutase type II CA940_RS12795 SM00925 MltA specific insert domain CA940_RS12810 SM00342 helix_turn_helix, arabinose operon control protein CA940_RS12845 SM00271 DnaJ molecular chaperone homology domain CA940_RS12965 SM00861 Transketolase, pyrimidine binding domain CA940_RS13015 SM00470 ParB-like nuclease domain CA940_RS13045 SM00257 Lysin motif CA940_RS13060 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CA940_RS13060 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CA940_RS13060 SM00493 CA940_RS13060 CA940_RS13115 SM00864 Tubulin/FtsZ family, GTPase domain CA940_RS13115 SM00865 Tubulin/FtsZ family, C-terminal domain CA940_RS13120 SM00842 Cell division protein FtsA CA940_RS13165 SM00771 ZipA, C-terminal domain (FtsZ-binding) CA940_RS13195 SM00978 CA940_RS13195 CA940_RS13205 SM00851 MGS-like domain CA940_RS13205 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CA940_RS13275 SM00671 Sel1-like repeats. CA940_RS13300 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CA940_RS13300 SM00465 GIY-YIG type nucleases (URI domain) CA940_RS13305 SM00421 helix_turn_helix, Lux Regulon CA940_RS13305 SM00448 cheY-homologous receiver domain CA940_RS13315 SM00852 Probable molybdopterin binding domain CA940_RS13350 SM00267 diguanylate cyclase CA940_RS13370 SM00899 CA940_RS13370 CA940_RS13405 SM00878 Biotin carboxylase C-terminal domain CA940_RS13430 SM00382 ATPases associated with a variety of cellular activities CA940_RS13435 SM00382 ATPases associated with a variety of cellular activities CA940_RS13435 SM00962 SRP54-type protein, GTPase domain CA940_RS13435 SM00963 SRP54-type protein, helical bundle domain CA940_RS13505 SM01329 CA940_RS13505 CA940_RS13580 SM01340 CA940_RS13580 CA940_RS13585 SM00257 Lysin motif CA940_RS13585 SM00646 CA940_RS13585 CA940_RS13640 SM00411 bacterial (prokaryotic) histone like domain CA940_RS13645 SM00873 B3/4 domain CA940_RS13645 SM00874 tRNA synthetase B5 domain CA940_RS13645 SM00896 Ferredoxin-fold anticodon binding domain CA940_RS13670 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CA940_RS13680 SM01152 CA940_RS13680 CA940_RS13685 SM00530 Helix-turn-helix XRE-family like proteins CA940_RS13720 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CA940_RS13775 SM00387 Histidine kinase-like ATPases CA940_RS13795 SM00028 Tetratricopeptide repeats CA940_RS13810 SM00479 CA940_RS13810 CA940_RS13855 SM00382 ATPases associated with a variety of cellular activities CA940_RS13865 SM00493 CA940_RS13865 CA940_RS13885 SM00448 cheY-homologous receiver domain CA940_RS13885 SM00862 Transcriptional regulatory protein, C terminal CA940_RS13900 SM00116 Domain in cystathionine beta-synthase and other proteins. CA940_RS13900 SM01091 Transporter associated domain CA940_RS13925 SM00316 Ribosomal protein S1-like RNA-binding domain CA940_RS13925 SM00322 K homology RNA-binding domain CA940_RS13930 SM01387 CA940_RS13930 CA940_RS13950 SM00316 Ribosomal protein S1-like RNA-binding domain CA940_RS13950 SM00322 K homology RNA-binding domain CA940_RS14000 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CA940_RS14005 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CA940_RS14065 SM00382 ATPases associated with a variety of cellular activities CA940_RS14075 SM01103 CA940_RS14075 CA940_RS14135 SM00763 PrkA AAA domain CA940_RS14180 SM01301 CA940_RS14180 CA940_RS14200 SM00357 Cold shock protein domain CA940_RS14235 SM00504 Modified RING finger domain CA940_RS14255 SM00316 Ribosomal protein S1-like RNA-binding domain CA940_RS14255 SM00732 Likely ribonuclease with RNase H fold. CA940_RS14275 SM00450 Rhodanese Homology Domain CA940_RS14295 SM00670 Large family of predicted nucleotide-binding domains CA940_RS14300 SM01240 CA940_RS14300 CA940_RS14335 SM00357 Cold shock protein domain CA940_RS14355 SM00028 Tetratricopeptide repeats CA940_RS14360 SM00327 von Willebrand factor (vWF) type A domain CA940_RS14365 SM00327 von Willebrand factor (vWF) type A domain CA940_RS14415 SM00487 DEAD-like helicases superfamily CA940_RS14415 SM00490 helicase superfamily c-terminal domain CA940_RS14445 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CA940_RS14455 SM00870 CA940_RS14455 CA940_RS14490 SM00478 endonuclease III CA940_RS14490 SM00525 CA940_RS14490 CA940_RS14535 SM01228 CA940_RS14535 CA940_RS14550 SM00470 ParB-like nuclease domain CA940_RS14715 SM00382 ATPases associated with a variety of cellular activities CA940_RS14750 SM00382 ATPases associated with a variety of cellular activities CA940_RS14775 SM00650 Ribosomal RNA adenine dimethylases CA940_RS14790 SM00992 Hemimethylated DNA-binding protein YccV like CA940_RS14810 SM00357 Cold shock protein domain CA940_RS14810 SM00382 ATPases associated with a variety of cellular activities CA940_RS14810 SM00959 Rho termination factor, N-terminal domain CA940_RS14865 SM00382 ATPases associated with a variety of cellular activities CA940_RS14920 SM00411 bacterial (prokaryotic) histone like domain CA940_RS14930 SM00244 prohibitin homologues CA940_RS14975 SM00479 CA940_RS14975 CA940_RS15010 SM00919 Malic enzyme, NAD binding domain CA940_RS15010 SM01274 CA940_RS15010 CA940_RS15050 SM00434 DNA Topoisomerase IV CA940_RS15060 SM00382 ATPases associated with a variety of cellular activities CA940_RS15110 SM00749 bacterial OsmY and nodulation domain CA940_RS15140 SM00100 Cyclic nucleotide-monophosphate binding domain CA940_RS15150 SM00235 Zinc-dependent metalloprotease CA940_RS15170 SM01234 CA940_RS15170 CA940_RS15230 SM00530 Helix-turn-helix XRE-family like proteins CA940_RS15240 SM00857 Resolvase, N terminal domain CA940_RS15290 SM00857 Resolvase, N terminal domain