LJPFL01_RS00005 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain LJPFL01_RS00010 SM00480 DNA polymerase III beta subunit LJPFL01_RS00020 SM00387 Histidine kinase-like ATPases LJPFL01_RS00020 SM00433 TopoisomeraseII LJPFL01_RS00030 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS00030 SM00895 LJPFL01_RS00030 LJPFL01_RS00045 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LJPFL01_RS00080 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS00080 SM00866 LJPFL01_RS00080 LJPFL01_RS00155 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS00155 SM00448 cheY-homologous receiver domain LJPFL01_RS00160 SM00387 Histidine kinase-like ATPases LJPFL01_RS00230 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS00320 SM00095 Transthyretin LJPFL01_RS00325 SM00422 helix_turn_helix, mercury resistance LJPFL01_RS00360 SM00357 Cold shock protein domain LJPFL01_RS00395 SM00487 DEAD-like helicases superfamily LJPFL01_RS00395 SM00490 helicase superfamily c-terminal domain LJPFL01_RS00405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LJPFL01_RS00405 SM00954 Region found in RelA / SpoT proteins LJPFL01_RS00410 SM01409 LJPFL01_RS00410 LJPFL01_RS00415 SM00072 Guanylate kinase homologues. LJPFL01_RS00420 SM00532 Ligase N family LJPFL01_RS00485 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain LJPFL01_RS00485 SM01232 LJPFL01_RS00485 LJPFL01_RS00560 SM00829 Enoylreductase LJPFL01_RS00585 SM00450 Rhodanese Homology Domain LJPFL01_RS00605 SM00971 Serine acetyltransferase, N-terminal LJPFL01_RS00625 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS00625 SM00895 LJPFL01_RS00625 LJPFL01_RS00720 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS00725 SM01007 Class II Aldolase and Adducin N-terminal domain LJPFL01_RS00735 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family LJPFL01_RS00765 SM00346 helix_turn_helix isocitrate lyase regulation LJPFL01_RS00775 SM00642 Alpha-amylase domain LJPFL01_RS00780 SM00047 Lysozyme subfamily 2 LJPFL01_RS00785 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS00795 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS00825 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS00850 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS00855 SM00530 Helix-turn-helix XRE-family like proteins LJPFL01_RS00870 SM00357 Cold shock protein domain LJPFL01_RS00895 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS00965 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS00970 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS01010 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. LJPFL01_RS01010 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. LJPFL01_RS01015 SM00649 Ribosomal protein L11/L12 LJPFL01_RS01045 SM00663 RNA polymerase I subunit A N-terminus LJPFL01_RS01060 SM00267 diguanylate cyclase LJPFL01_RS01065 SM00876 Biotin and Thiamin Synthesis associated domain LJPFL01_RS01120 SM00411 bacterial (prokaryotic) histone like domain LJPFL01_RS01130 SM01209 LJPFL01_RS01130 LJPFL01_RS01130 SM01210 LJPFL01_RS01130 LJPFL01_RS01135 SM00798 AICARFT/IMPCHase bienzyme LJPFL01_RS01135 SM00851 MGS-like domain LJPFL01_RS01180 SM00346 helix_turn_helix isocitrate lyase regulation LJPFL01_RS01185 SM01018 B12 binding domain LJPFL01_RS01205 SM00363 S4 RNA-binding domain LJPFL01_RS01270 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS01295 SM00563 Phosphate acyltransferases LJPFL01_RS01345 SM00829 Enoylreductase LJPFL01_RS01350 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS01355 SM01005 Alanine racemase, C-terminal domain LJPFL01_RS01395 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS01400 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS01405 SM00267 diguanylate cyclase LJPFL01_RS01455 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS01480 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS01540 SM00858 LJPFL01_RS01540 LJPFL01_RS01620 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS01730 SM00671 Sel1-like repeats. LJPFL01_RS01745 SM00448 cheY-homologous receiver domain LJPFL01_RS01745 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS01780 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS01785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS01785 SM00387 Histidine kinase-like ATPases LJPFL01_RS01785 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS01785 SM00448 cheY-homologous receiver domain LJPFL01_RS01805 SM00072 Guanylate kinase homologues. LJPFL01_RS01815 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS01820 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS01845 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS01845 SM00866 LJPFL01_RS01845 LJPFL01_RS01865 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS01935 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS01985 SM00883 Chaperonin 10 Kd subunit LJPFL01_RS02010 SM00841 Elongation factor P, C-terminal LJPFL01_RS02010 SM01185 LJPFL01_RS02010 LJPFL01_RS02025 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS02085 SM00479 LJPFL01_RS02085 LJPFL01_RS02120 SM00646 LJPFL01_RS02120 LJPFL01_RS02125 SM00853 MutL C terminal dimerisation domain LJPFL01_RS02125 SM01340 LJPFL01_RS02125 LJPFL01_RS02145 SM00244 prohibitin homologues LJPFL01_RS02150 SM00244 prohibitin homologues LJPFL01_RS02160 SM00788 Adenylosuccinate synthetase LJPFL01_RS02170 SM00316 Ribosomal protein S1-like RNA-binding domain LJPFL01_RS02170 SM00357 Cold shock protein domain LJPFL01_RS02170 SM00955 LJPFL01_RS02170 LJPFL01_RS02175 SM00967 RNA 2'-O ribose methyltransferase substrate binding LJPFL01_RS02190 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS02190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS02210 SM00420 helix_turn_helix, Deoxyribose operon repressor LJPFL01_RS02210 SM01134 LJPFL01_RS02210 LJPFL01_RS02235 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family LJPFL01_RS02245 SM01007 Class II Aldolase and Adducin N-terminal domain LJPFL01_RS02300 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS02300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS02300 SM00319 Homologues of the ligand binding domain of Tar LJPFL01_RS02310 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS02370 SM01091 Transporter associated domain LJPFL01_RS02395 SM00966 SpoVT / AbrB like domain LJPFL01_RS02425 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS02440 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS02440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS02540 SM00642 Alpha-amylase domain LJPFL01_RS02550 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS02555 SM00831 Cation transporter/ATPase, N-terminus LJPFL01_RS02635 SM01130 LJPFL01_RS02635 LJPFL01_RS02655 SM00346 helix_turn_helix isocitrate lyase regulation LJPFL01_RS02690 SM00487 DEAD-like helicases superfamily LJPFL01_RS02690 SM00490 helicase superfamily c-terminal domain LJPFL01_RS02715 SM00530 Helix-turn-helix XRE-family like proteins LJPFL01_RS02850 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS02885 SM00420 helix_turn_helix, Deoxyribose operon repressor LJPFL01_RS02885 SM01134 LJPFL01_RS02885 LJPFL01_RS02900 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. LJPFL01_RS02930 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS02955 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS02980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LJPFL01_RS02985 SM00347 helix_turn_helix multiple antibiotic resistance protein LJPFL01_RS03050 SM00833 Cobalamin synthesis protein cobW C-terminal domain LJPFL01_RS03070 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS03070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS03070 SM00319 Homologues of the ligand binding domain of Tar LJPFL01_RS03085 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS03100 SM00347 helix_turn_helix multiple antibiotic resistance protein LJPFL01_RS03120 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS03125 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS03145 SM00267 diguanylate cyclase LJPFL01_RS03195 SM00749 bacterial OsmY and nodulation domain LJPFL01_RS03225 SM01133 LJPFL01_RS03225 LJPFL01_RS03230 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain LJPFL01_RS03255 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS03260 SM00530 Helix-turn-helix XRE-family like proteins LJPFL01_RS03265 SM00829 Enoylreductase LJPFL01_RS03275 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS03300 SM00855 Phosphoglycerate mutase family LJPFL01_RS03305 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS03305 SM00871 Bacterial transcription activator, effector binding domain LJPFL01_RS03315 SM00448 cheY-homologous receiver domain LJPFL01_RS03315 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS03320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS03320 SM00387 Histidine kinase-like ATPases LJPFL01_RS03320 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS03330 SM00448 cheY-homologous receiver domain LJPFL01_RS03330 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS03385 SM00852 Probable molybdopterin binding domain LJPFL01_RS03400 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS03425 SM00271 DnaJ molecular chaperone homology domain LJPFL01_RS03450 SM00904 Riboflavin kinase LJPFL01_RS03510 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS03520 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain LJPFL01_RS03525 SM00851 MGS-like domain LJPFL01_RS03525 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LJPFL01_RS03550 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS03595 SM00650 Ribosomal RNA adenine dimethylases LJPFL01_RS03615 SM00271 DnaJ molecular chaperone homology domain LJPFL01_RS03625 SM00487 DEAD-like helicases superfamily LJPFL01_RS03625 SM00490 helicase superfamily c-terminal domain LJPFL01_RS03630 SM00486 DNA polymerase type-B family LJPFL01_RS03635 SM01007 Class II Aldolase and Adducin N-terminal domain LJPFL01_RS03650 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS03660 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS03700 SM01329 LJPFL01_RS03700 LJPFL01_RS03705 SM00917 LeuA allosteric (dimerisation) domain LJPFL01_RS03725 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS03795 SM00842 Cell division protein FtsA LJPFL01_RS03800 SM00864 Tubulin/FtsZ family, GTPase domain LJPFL01_RS03800 SM00865 Tubulin/FtsZ family, C-terminal domain LJPFL01_RS03815 SM00957 SecA DEAD-like domain LJPFL01_RS03815 SM00958 SecA preprotein cross-linking domain LJPFL01_RS03840 SM01240 LJPFL01_RS03840 LJPFL01_RS03865 SM00644 LJPFL01_RS03865 LJPFL01_RS03890 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS03890 SM00895 LJPFL01_RS03890 LJPFL01_RS03950 SM00564 beta-propeller repeat LJPFL01_RS03960 SM00947 Carbonic anhydrase LJPFL01_RS03965 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS04030 SM00487 DEAD-like helicases superfamily LJPFL01_RS04030 SM00490 helicase superfamily c-terminal domain LJPFL01_RS04030 SM00847 Helicase associated domain (HA2) Add an annotation LJPFL01_RS04045 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS04090 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LJPFL01_RS04095 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LJPFL01_RS04115 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LJPFL01_RS04165 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LJPFL01_RS04175 SM00935 Outer membrane protein (OmpH-like) LJPFL01_RS04205 SM00481 DNA polymerase alpha chain like domain LJPFL01_RS04225 SM00977 TilS substrate C-terminal domain LJPFL01_RS04240 SM01322 LJPFL01_RS04240 LJPFL01_RS04280 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS04280 SM00930 LJPFL01_RS04280 LJPFL01_RS04345 SM00257 Lysin motif LJPFL01_RS04350 SM00849 Metallo-beta-lactamase superfamily LJPFL01_RS04365 SM00479 LJPFL01_RS04365 LJPFL01_RS04375 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS04375 SM00895 LJPFL01_RS04375 LJPFL01_RS04380 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS04385 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS04465 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase LJPFL01_RS04485 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS04540 SM00448 cheY-homologous receiver domain LJPFL01_RS04545 SM00091 PAS domain LJPFL01_RS04545 SM00387 Histidine kinase-like ATPases LJPFL01_RS04555 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS04575 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS04605 SM00267 diguanylate cyclase LJPFL01_RS04605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS04625 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS04645 SM00387 Histidine kinase-like ATPases LJPFL01_RS04650 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS04650 SM00448 cheY-homologous receiver domain LJPFL01_RS04690 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS04695 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS04710 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS04715 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS04730 SM00563 Phosphate acyltransferases LJPFL01_RS04735 SM01004 Delta-aminolevulinic acid dehydratase LJPFL01_RS04755 SM00869 Autotransporter beta-domain LJPFL01_RS04815 SM00098 Alkaline phosphatase homologues LJPFL01_RS04825 SM00267 diguanylate cyclase LJPFL01_RS04890 SM00448 cheY-homologous receiver domain LJPFL01_RS04890 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS04895 SM00091 PAS domain LJPFL01_RS04895 SM00387 Histidine kinase-like ATPases LJPFL01_RS04895 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS04910 SM00642 Alpha-amylase domain LJPFL01_RS04950 SM01323 LJPFL01_RS04950 LJPFL01_RS05010 SM00861 Transketolase, pyrimidine binding domain LJPFL01_RS05025 SM00981 LJPFL01_RS05025 LJPFL01_RS05030 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS05030 SM00866 LJPFL01_RS05030 LJPFL01_RS05120 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS05120 SM00994 ClpX C4-type zinc finger LJPFL01_RS05120 SM01086 C-terminal, D2-small domain, of ClpB protein LJPFL01_RS05125 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS05125 SM00464 Found in ATP-dependent protease La (LON) LJPFL01_RS05130 SM00411 bacterial (prokaryotic) histone like domain LJPFL01_RS05140 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LJPFL01_RS05185 SM00344 helix_turn_helix ASNC type LJPFL01_RS05190 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS05195 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS05200 SM00938 Nitrogen regulatory protein P-II LJPFL01_RS05245 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS05255 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS05260 SM01038 Beta galactosidase small chain LJPFL01_RS05270 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS05275 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS05275 SM00866 LJPFL01_RS05275 LJPFL01_RS05280 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LJPFL01_RS05305 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS05315 SM01266 LJPFL01_RS05315 LJPFL01_RS05370 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS05380 SM00493 LJPFL01_RS05380 LJPFL01_RS05385 SM00387 Histidine kinase-like ATPases LJPFL01_RS05440 SM00422 helix_turn_helix, mercury resistance LJPFL01_RS05450 SM00244 prohibitin homologues LJPFL01_RS05455 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS05470 SM00822 LJPFL01_RS05470 LJPFL01_RS05480 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS05500 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS05500 SM00930 LJPFL01_RS05500 LJPFL01_RS05510 SM00450 Rhodanese Homology Domain LJPFL01_RS05520 SM01001 AIR carboxylase LJPFL01_RS05540 SM00840 LJPFL01_RS05540 LJPFL01_RS05545 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS05595 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS05595 SM00448 cheY-homologous receiver domain LJPFL01_RS05605 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS05685 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS05690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS05690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS05690 SM01358 LJPFL01_RS05690 LJPFL01_RS05695 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS05700 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS05810 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS05825 SM00530 Helix-turn-helix XRE-family like proteins LJPFL01_RS05855 SM00849 Metallo-beta-lactamase superfamily LJPFL01_RS05860 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS05890 SM00831 Cation transporter/ATPase, N-terminus LJPFL01_RS05930 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS05935 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS05970 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. LJPFL01_RS06005 SM00923 MbtH-like protein LJPFL01_RS06010 SM00823 Phosphopantetheine attachment site LJPFL01_RS06010 SM00824 Thioesterase LJPFL01_RS06015 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS06055 SM00822 LJPFL01_RS06055 LJPFL01_RS06075 SM00530 Helix-turn-helix XRE-family like proteins LJPFL01_RS06085 SM00822 LJPFL01_RS06085 LJPFL01_RS06095 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS06140 SM01007 Class II Aldolase and Adducin N-terminal domain LJPFL01_RS06150 SM00470 ParB-like nuclease domain LJPFL01_RS06180 SM00903 Flavin reductase like domain LJPFL01_RS06185 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS06255 SM00357 Cold shock protein domain LJPFL01_RS06275 SM00729 Elongator protein 3, MiaB family, Radical SAM LJPFL01_RS06295 SM00936 Penicillin-binding protein 5, C-terminal domain LJPFL01_RS06350 SM01068 Putative carbohydrate binding domain LJPFL01_RS06365 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS06380 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS06390 SM00116 Domain in cystathionine beta-synthase and other proteins. LJPFL01_RS06390 SM01091 Transporter associated domain LJPFL01_RS06405 SM00729 Elongator protein 3, MiaB family, Radical SAM LJPFL01_RS06540 SM00448 cheY-homologous receiver domain LJPFL01_RS06540 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS06545 SM00387 Histidine kinase-like ATPases LJPFL01_RS06545 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS06585 SM00796 Allophanate hydrolase subunit 1 LJPFL01_RS06590 SM00797 Allophanate hydrolase subunit 2 LJPFL01_RS06615 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain LJPFL01_RS06615 SM01232 LJPFL01_RS06615 LJPFL01_RS06655 SM00861 Transketolase, pyrimidine binding domain LJPFL01_RS06670 SM00881 CoA binding domain LJPFL01_RS06805 SM00855 Phosphoglycerate mutase family LJPFL01_RS06830 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS06855 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS06910 SM00729 Elongator protein 3, MiaB family, Radical SAM LJPFL01_RS06910 SM00876 Biotin and Thiamin Synthesis associated domain LJPFL01_RS06930 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS06935 SM00487 DEAD-like helicases superfamily LJPFL01_RS06935 SM00490 helicase superfamily c-terminal domain LJPFL01_RS06950 SM00729 Elongator protein 3, MiaB family, Radical SAM LJPFL01_RS06955 SM00852 Probable molybdopterin binding domain LJPFL01_RS06985 SM00155 Phospholipase D. Active site motifs. LJPFL01_RS07010 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS07025 SM00487 DEAD-like helicases superfamily LJPFL01_RS07025 SM00490 helicase superfamily c-terminal domain LJPFL01_RS07030 SM00487 DEAD-like helicases superfamily LJPFL01_RS07030 SM00488 LJPFL01_RS07030 LJPFL01_RS07030 SM00491 LJPFL01_RS07030 LJPFL01_RS07065 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS07075 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS07075 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LJPFL01_RS07110 SM00529 Helix-turn-helix diphteria tox regulatory element LJPFL01_RS07150 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS07150 SM00866 LJPFL01_RS07150 LJPFL01_RS07160 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS07175 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS07210 SM00852 Probable molybdopterin binding domain LJPFL01_RS07225 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS07260 SM00936 Penicillin-binding protein 5, C-terminal domain LJPFL01_RS07265 SM00420 helix_turn_helix, Deoxyribose operon repressor LJPFL01_RS07265 SM01134 LJPFL01_RS07265 LJPFL01_RS07270 SM00014 Acid phosphatase homologues LJPFL01_RS07350 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS07375 SM00448 cheY-homologous receiver domain LJPFL01_RS07375 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS07380 SM00387 Histidine kinase-like ATPases LJPFL01_RS07380 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS07385 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS07385 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LJPFL01_RS07400 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS07400 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LJPFL01_RS07405 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS07420 SM00644 LJPFL01_RS07420 LJPFL01_RS07490 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS07495 SM00357 Cold shock protein domain LJPFL01_RS07505 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS07505 SM01086 C-terminal, D2-small domain, of ClpB protein LJPFL01_RS07515 SM00316 Ribosomal protein S1-like RNA-binding domain LJPFL01_RS07530 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS07535 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS07550 SM00344 helix_turn_helix ASNC type LJPFL01_RS07555 SM00843 LJPFL01_RS07555 LJPFL01_RS07565 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS07575 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LJPFL01_RS07635 SM00316 Ribosomal protein S1-like RNA-binding domain LJPFL01_RS07640 SM00411 bacterial (prokaryotic) histone like domain LJPFL01_RS07645 SM00849 Metallo-beta-lactamase superfamily LJPFL01_RS07650 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS07720 SM00849 Metallo-beta-lactamase superfamily LJPFL01_RS07760 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS07775 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS07800 SM00981 LJPFL01_RS07800 LJPFL01_RS07805 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS07880 SM00851 MGS-like domain LJPFL01_RS07895 SM00881 CoA binding domain LJPFL01_RS07900 SM00992 Hemimethylated DNA-binding protein YccV like LJPFL01_RS07905 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase LJPFL01_RS07965 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS07985 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS08005 SM00965 Secretin and TonB N terminus short domain LJPFL01_RS08035 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LJPFL01_RS08040 SM00267 diguanylate cyclase LJPFL01_RS08045 SM00822 LJPFL01_RS08045 LJPFL01_RS08095 SM00903 Flavin reductase like domain LJPFL01_RS08205 SM00481 DNA polymerase alpha chain like domain LJPFL01_RS08235 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS08260 SM00506 Appr-1"-p processing enzyme LJPFL01_RS08265 SM00155 Phospholipase D. Active site motifs. LJPFL01_RS08310 SM00450 Rhodanese Homology Domain LJPFL01_RS08315 SM00867 YceI-like domain LJPFL01_RS08390 SM00858 LJPFL01_RS08390 LJPFL01_RS08435 SM00047 Lysozyme subfamily 2 LJPFL01_RS08460 SM00316 Ribosomal protein S1-like RNA-binding domain LJPFL01_RS08470 SM00363 S4 RNA-binding domain LJPFL01_RS08500 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. LJPFL01_RS08505 SM00822 LJPFL01_RS08505 LJPFL01_RS08515 SM00825 Beta-ketoacyl synthase LJPFL01_RS08610 SM00257 Lysin motif LJPFL01_RS08615 SM00487 DEAD-like helicases superfamily LJPFL01_RS08615 SM00490 helicase superfamily c-terminal domain LJPFL01_RS08615 SM00982 LJPFL01_RS08615 LJPFL01_RS08615 SM01058 CarD-like/TRCF domain LJPFL01_RS08630 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS08665 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS08675 SM01321 LJPFL01_RS08675 LJPFL01_RS08680 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. LJPFL01_RS08685 SM00387 Histidine kinase-like ATPases LJPFL01_RS08685 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS08690 SM00448 cheY-homologous receiver domain LJPFL01_RS08690 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS08715 SM00851 MGS-like domain LJPFL01_RS08730 SM01329 LJPFL01_RS08730 LJPFL01_RS08770 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS08770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS08800 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LJPFL01_RS08800 SM00267 diguanylate cyclase LJPFL01_RS08835 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS08865 SM00267 diguanylate cyclase LJPFL01_RS08880 SM00763 PrkA AAA domain LJPFL01_RS08900 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LJPFL01_RS08915 SM00636 LJPFL01_RS08915 LJPFL01_RS08920 SM00507 HNH nucleases LJPFL01_RS08930 SM00870 LJPFL01_RS08930 LJPFL01_RS08960 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LJPFL01_RS08960 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LJPFL01_RS08960 SM00493 LJPFL01_RS08960 LJPFL01_RS08970 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase LJPFL01_RS08995 SM00450 Rhodanese Homology Domain LJPFL01_RS09000 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS09065 SM00465 GIY-YIG type nucleases (URI domain) LJPFL01_RS09095 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS09110 SM01060 LJPFL01_RS09110 LJPFL01_RS09185 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LJPFL01_RS09215 SM00873 B3/4 domain LJPFL01_RS09215 SM00874 tRNA synthetase B5 domain LJPFL01_RS09215 SM00896 Ferredoxin-fold anticodon binding domain LJPFL01_RS09220 SM00411 bacterial (prokaryotic) histone like domain LJPFL01_RS09235 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS09255 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS09345 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LJPFL01_RS09360 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LJPFL01_RS09380 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS09380 SM01034 Sensors of blue-light using FAD LJPFL01_RS09385 SM00422 helix_turn_helix, mercury resistance LJPFL01_RS09405 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS09425 SM00257 Lysin motif LJPFL01_RS09445 SM00116 Domain in cystathionine beta-synthase and other proteins. LJPFL01_RS09450 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS09450 SM00930 LJPFL01_RS09450 LJPFL01_RS09480 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS09485 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS09485 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LJPFL01_RS09490 SM00387 Histidine kinase-like ATPases LJPFL01_RS09495 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS09495 SM00448 cheY-homologous receiver domain LJPFL01_RS09510 SM00849 Metallo-beta-lactamase superfamily LJPFL01_RS09515 SM00947 Carbonic anhydrase LJPFL01_RS09535 SM00822 LJPFL01_RS09535 LJPFL01_RS09550 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS09615 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS09655 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS09685 SM00479 LJPFL01_RS09685 LJPFL01_RS09740 SM00347 helix_turn_helix multiple antibiotic resistance protein LJPFL01_RS09745 SM00267 diguanylate cyclase LJPFL01_RS09770 SM00363 S4 RNA-binding domain LJPFL01_RS09790 SM00478 endonuclease III LJPFL01_RS09790 SM00525 LJPFL01_RS09790 LJPFL01_RS09800 SM00900 LJPFL01_RS09800 LJPFL01_RS09860 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS09915 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS09920 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS09930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS09930 SM00387 Histidine kinase-like ATPases LJPFL01_RS09930 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS09945 SM00448 cheY-homologous receiver domain LJPFL01_RS09945 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS09980 SM01002 Alanine dehydrogenase/PNT, C-terminal domain LJPFL01_RS09980 SM01003 Alanine dehydrogenase/PNT, N-terminal domain LJPFL01_RS10000 SM00100 Cyclic nucleotide-monophosphate binding domain LJPFL01_RS10000 SM00419 helix_turn_helix, cAMP Regulatory protein LJPFL01_RS10030 SM00463 Small MutS-related domain LJPFL01_RS10035 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS10035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS10035 SM00319 Homologues of the ligand binding domain of Tar LJPFL01_RS10095 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS10095 SM00267 diguanylate cyclase LJPFL01_RS10160 SM00869 Autotransporter beta-domain LJPFL01_RS10165 SM00974 LJPFL01_RS10165 LJPFL01_RS10205 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS10205 SM00267 diguanylate cyclase LJPFL01_RS10210 SM01059 Chloramphenicol acetyltransferase LJPFL01_RS10260 SM00116 Domain in cystathionine beta-synthase and other proteins. LJPFL01_RS10260 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS10290 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LJPFL01_RS10325 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LJPFL01_RS10355 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS10355 SM00895 LJPFL01_RS10355 LJPFL01_RS10400 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS10410 SM00267 diguanylate cyclase LJPFL01_RS10415 SM00849 Metallo-beta-lactamase superfamily LJPFL01_RS10495 SM00357 Cold shock protein domain LJPFL01_RS10505 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS10505 SM00487 DEAD-like helicases superfamily LJPFL01_RS10505 SM00490 helicase superfamily c-terminal domain LJPFL01_RS10505 SM00847 Helicase associated domain (HA2) Add an annotation LJPFL01_RS10540 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LJPFL01_RS10565 SM00829 Enoylreductase LJPFL01_RS10570 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS10570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS10570 SM00319 Homologues of the ligand binding domain of Tar LJPFL01_RS10575 SM00564 beta-propeller repeat LJPFL01_RS10585 SM01150 LJPFL01_RS10585 LJPFL01_RS10610 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS10660 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS10670 SM00530 Helix-turn-helix XRE-family like proteins LJPFL01_RS10690 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS10695 SM00450 Rhodanese Homology Domain LJPFL01_RS10725 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS10750 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS10755 SM00347 helix_turn_helix multiple antibiotic resistance protein LJPFL01_RS10775 SM00530 Helix-turn-helix XRE-family like proteins LJPFL01_RS10800 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS10800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS10810 SM00267 diguanylate cyclase LJPFL01_RS10815 SM00267 diguanylate cyclase LJPFL01_RS10820 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LJPFL01_RS10820 SM00267 diguanylate cyclase LJPFL01_RS10875 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS10925 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS10925 SM01034 Sensors of blue-light using FAD LJPFL01_RS10935 SM00530 Helix-turn-helix XRE-family like proteins LJPFL01_RS10975 SM00849 Metallo-beta-lactamase superfamily LJPFL01_RS10995 SM00919 Malic enzyme, NAD binding domain LJPFL01_RS10995 SM01274 LJPFL01_RS10995 LJPFL01_RS11000 SM00507 HNH nucleases LJPFL01_RS11005 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS11015 SM00829 Enoylreductase LJPFL01_RS11045 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS11120 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS11125 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS11160 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LJPFL01_RS11195 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS11200 SM00903 Flavin reductase like domain LJPFL01_RS11215 SM00838 Elongation factor G C-terminus LJPFL01_RS11215 SM00889 Elongation factor G, domain IV LJPFL01_RS11220 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor LJPFL01_RS11225 SM00849 Metallo-beta-lactamase superfamily LJPFL01_RS11240 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS11245 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS11260 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS11280 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LJPFL01_RS11280 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS11325 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS11325 SM00895 LJPFL01_RS11325 LJPFL01_RS11330 SM00829 Enoylreductase LJPFL01_RS11335 SM00530 Helix-turn-helix XRE-family like proteins LJPFL01_RS11480 SM00635 Bacterial Ig-like domain 2 LJPFL01_RS11675 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS11685 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS11720 SM00890 Domain of unknown function LJPFL01_RS11735 SM00487 DEAD-like helicases superfamily LJPFL01_RS11735 SM00490 helicase superfamily c-terminal domain LJPFL01_RS11745 SM00267 diguanylate cyclase LJPFL01_RS11750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS11755 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS11755 SM00267 diguanylate cyclase LJPFL01_RS11760 SM00091 PAS domain LJPFL01_RS11760 SM00267 diguanylate cyclase LJPFL01_RS11775 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LJPFL01_RS11795 SM00091 PAS domain LJPFL01_RS11795 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS11830 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS11850 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS11855 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS11870 SM00357 Cold shock protein domain LJPFL01_RS11870 SM00955 LJPFL01_RS11870 LJPFL01_RS11875 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS11875 SM00091 PAS domain LJPFL01_RS11875 SM00267 diguanylate cyclase LJPFL01_RS11890 SM00420 helix_turn_helix, Deoxyribose operon repressor LJPFL01_RS11890 SM01134 LJPFL01_RS11890 LJPFL01_RS11905 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family LJPFL01_RS11910 SM00028 Tetratricopeptide repeats LJPFL01_RS11920 SM00014 Acid phosphatase homologues LJPFL01_RS11950 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain LJPFL01_RS11950 SM00437 Bacterial DNA topoisomerase I DNA-binding domain LJPFL01_RS11950 SM00493 LJPFL01_RS11950 LJPFL01_RS11965 SM00822 LJPFL01_RS11965 LJPFL01_RS11975 SM00363 S4 RNA-binding domain LJPFL01_RS11985 SM00481 DNA polymerase alpha chain like domain LJPFL01_RS12015 SM00347 helix_turn_helix multiple antibiotic resistance protein LJPFL01_RS12020 SM00829 Enoylreductase LJPFL01_RS12085 SM00155 Phospholipase D. Active site motifs. LJPFL01_RS12100 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS12105 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS12140 SM00528 Domain in histone-like proteins of HNS family LJPFL01_RS12150 SM00448 cheY-homologous receiver domain LJPFL01_RS12210 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LJPFL01_RS12220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS12220 SM00387 Histidine kinase-like ATPases LJPFL01_RS12225 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS12225 SM00448 cheY-homologous receiver domain LJPFL01_RS12240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS12240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS12285 SM00937 LJPFL01_RS12285 LJPFL01_RS12310 SM01400 LJPFL01_RS12310 LJPFL01_RS12405 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LJPFL01_RS12415 SM00882 Coenzyme A transferase LJPFL01_RS12420 SM00882 Coenzyme A transferase LJPFL01_RS12430 SM00903 Flavin reductase like domain LJPFL01_RS12475 SM00347 helix_turn_helix multiple antibiotic resistance protein LJPFL01_RS12490 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS12495 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LJPFL01_RS12505 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS12545 SM01091 Transporter associated domain LJPFL01_RS12550 SM01005 Alanine racemase, C-terminal domain LJPFL01_RS12565 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS12605 SM00341 Helicase and RNase D C-terminal LJPFL01_RS12605 SM00474 3'-5' exonuclease LJPFL01_RS12625 SM00487 DEAD-like helicases superfamily LJPFL01_RS12625 SM00491 LJPFL01_RS12625 LJPFL01_RS12655 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS12660 SM01091 Transporter associated domain LJPFL01_RS12705 SM00357 Cold shock protein domain LJPFL01_RS12740 SM00346 helix_turn_helix isocitrate lyase regulation LJPFL01_RS12755 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LJPFL01_RS12755 SM00245 tail specific protease LJPFL01_RS12760 SM00945 ProQ/FINO family LJPFL01_RS12765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LJPFL01_RS12830 SM00479 LJPFL01_RS12830 LJPFL01_RS12880 SM00257 Lysin motif LJPFL01_RS12890 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS12900 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS12905 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LJPFL01_RS12970 SM00836 DALR anticodon binding domain LJPFL01_RS12970 SM01016 Arginyl tRNA synthetase N terminal dom LJPFL01_RS13025 SM00448 cheY-homologous receiver domain LJPFL01_RS13030 SM00448 cheY-homologous receiver domain LJPFL01_RS13035 SM00138 Methyltransferase, chemotaxis proteins LJPFL01_RS13040 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS13040 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS13040 SM00319 Homologues of the ligand binding domain of Tar LJPFL01_RS13045 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS13045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS13045 SM00319 Homologues of the ligand binding domain of Tar LJPFL01_RS13050 SM00972 Spore Coat Protein U domain LJPFL01_RS13065 SM00972 Spore Coat Protein U domain LJPFL01_RS13070 SM00972 Spore Coat Protein U domain LJPFL01_RS13080 SM00260 Two component signalling adaptor domain LJPFL01_RS13085 SM00073 Histidine Phosphotransfer domain LJPFL01_RS13085 SM00260 Two component signalling adaptor domain LJPFL01_RS13085 SM00387 Histidine kinase-like ATPases LJPFL01_RS13085 SM01231 LJPFL01_RS13085 LJPFL01_RS13130 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS13180 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS13180 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LJPFL01_RS13215 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS13250 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LJPFL01_RS13250 SM00465 GIY-YIG type nucleases (URI domain) LJPFL01_RS13255 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS13255 SM00448 cheY-homologous receiver domain LJPFL01_RS13265 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS13270 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS13285 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS13285 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. LJPFL01_RS13325 SM00642 Alpha-amylase domain LJPFL01_RS13355 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS13405 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS13425 SM00267 diguanylate cyclase LJPFL01_RS13455 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LJPFL01_RS13470 SM00387 Histidine kinase-like ATPases LJPFL01_RS13475 SM00448 cheY-homologous receiver domain LJPFL01_RS13485 SM00900 LJPFL01_RS13485 LJPFL01_RS13530 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS13725 SM00487 DEAD-like helicases superfamily LJPFL01_RS13725 SM00490 helicase superfamily c-terminal domain LJPFL01_RS13845 SM00831 Cation transporter/ATPase, N-terminus LJPFL01_RS13915 SM00871 Bacterial transcription activator, effector binding domain LJPFL01_RS13920 SM00936 Penicillin-binding protein 5, C-terminal domain LJPFL01_RS14000 SM00984 UDP binding domain LJPFL01_RS14005 SM01350 LJPFL01_RS14005 LJPFL01_RS14195 SM00226 Low molecular weight phosphatase family LJPFL01_RS14205 SM01091 Transporter associated domain LJPFL01_RS14225 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS14225 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LJPFL01_RS14225 SM00091 PAS domain LJPFL01_RS14225 SM00267 diguanylate cyclase LJPFL01_RS14230 SM00478 endonuclease III LJPFL01_RS14230 SM01009 AlkA N-terminal domain LJPFL01_RS14265 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS14265 SM00387 Histidine kinase-like ATPases LJPFL01_RS14265 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS14270 SM00448 cheY-homologous receiver domain LJPFL01_RS14270 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS14285 SM00046 Diacylglycerol kinase catalytic domain (presumed) LJPFL01_RS14290 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS14295 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS14315 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LJPFL01_RS14320 SM01133 LJPFL01_RS14320 LJPFL01_RS14340 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS14340 SM00866 LJPFL01_RS14340 LJPFL01_RS14415 SM00448 cheY-homologous receiver domain LJPFL01_RS14415 SM00850 LytTr DNA-binding domain LJPFL01_RS14420 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LJPFL01_RS14420 SM00387 Histidine kinase-like ATPases LJPFL01_RS14425 SM00422 helix_turn_helix, mercury resistance LJPFL01_RS14440 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS14475 SM01217 LJPFL01_RS14475 LJPFL01_RS14540 SM01230 LJPFL01_RS14540 LJPFL01_RS14555 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS14565 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS14615 SM00518 AP endonuclease family 2 LJPFL01_RS14660 SM00841 Elongation factor P, C-terminal LJPFL01_RS14660 SM01185 LJPFL01_RS14660 LJPFL01_RS14680 SM00014 Acid phosphatase homologues LJPFL01_RS14695 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS14715 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS14735 SM00363 S4 RNA-binding domain LJPFL01_RS14740 SM00487 DEAD-like helicases superfamily LJPFL01_RS14740 SM00490 helicase superfamily c-terminal domain LJPFL01_RS14805 SM00924 MgtE intracellular N domain LJPFL01_RS14810 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS14820 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS14835 SM00387 Histidine kinase-like ATPases LJPFL01_RS14840 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS14840 SM00448 cheY-homologous receiver domain LJPFL01_RS14845 SM00387 Histidine kinase-like ATPases LJPFL01_RS14845 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS14845 SM00448 cheY-homologous receiver domain LJPFL01_RS14850 SM00434 DNA Topoisomerase IV LJPFL01_RS14895 SM00852 Probable molybdopterin binding domain LJPFL01_RS14910 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LJPFL01_RS14950 SM00260 Two component signalling adaptor domain LJPFL01_RS14950 SM00448 cheY-homologous receiver domain LJPFL01_RS14990 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LJPFL01_RS14990 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LJPFL01_RS14995 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LJPFL01_RS15030 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LJPFL01_RS15065 SM00861 Transketolase, pyrimidine binding domain LJPFL01_RS15090 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS15115 SM00905 Dihydroneopterin aldolase LJPFL01_RS15130 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS15145 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS15150 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS15195 SM00859 Semialdehyde dehydrogenase, NAD binding domain LJPFL01_RS15215 SM00825 Beta-ketoacyl synthase LJPFL01_RS15255 SM00463 Small MutS-related domain LJPFL01_RS15310 SM00387 Histidine kinase-like ATPases LJPFL01_RS15315 SM00448 cheY-homologous receiver domain LJPFL01_RS15315 SM00850 LytTr DNA-binding domain LJPFL01_RS15355 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS15355 SM00267 diguanylate cyclase LJPFL01_RS15425 SM00278 Helix-hairpin-helix DNA-binding motif class 1 LJPFL01_RS15425 SM00292 breast cancer carboxy-terminal domain LJPFL01_RS15425 SM00532 Ligase N family LJPFL01_RS15430 SM00771 ZipA, C-terminal domain (FtsZ-binding) LJPFL01_RS15470 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS15510 SM00646 LJPFL01_RS15510 LJPFL01_RS15525 SM00919 Malic enzyme, NAD binding domain LJPFL01_RS15525 SM01274 LJPFL01_RS15525 LJPFL01_RS15540 SM00861 Transketolase, pyrimidine binding domain LJPFL01_RS15605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS15605 SM00387 Histidine kinase-like ATPases LJPFL01_RS15655 SM01130 LJPFL01_RS15655 LJPFL01_RS15745 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS15745 SM00267 diguanylate cyclase LJPFL01_RS15760 SM00116 Domain in cystathionine beta-synthase and other proteins. LJPFL01_RS15760 SM01240 LJPFL01_RS15760 LJPFL01_RS15785 SM00564 beta-propeller repeat LJPFL01_RS15805 SM00530 Helix-turn-helix XRE-family like proteins LJPFL01_RS15815 SM00562 LJPFL01_RS15815 LJPFL01_RS15825 SM01359 LJPFL01_RS15825 LJPFL01_RS15825 SM01360 LJPFL01_RS15825 LJPFL01_RS15840 SM00450 Rhodanese Homology Domain LJPFL01_RS15875 SM00271 DnaJ molecular chaperone homology domain LJPFL01_RS15940 SM00028 Tetratricopeptide repeats LJPFL01_RS15990 SM00938 Nitrogen regulatory protein P-II LJPFL01_RS15995 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS15995 SM00448 cheY-homologous receiver domain LJPFL01_RS16005 SM00387 Histidine kinase-like ATPases LJPFL01_RS16005 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS16010 SM01211 LJPFL01_RS16010 LJPFL01_RS16015 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS16070 SM00358 Double-stranded RNA binding motif LJPFL01_RS16070 SM00535 Ribonuclease III family LJPFL01_RS16120 SM00487 DEAD-like helicases superfamily LJPFL01_RS16120 SM00490 helicase superfamily c-terminal domain LJPFL01_RS16130 SM00986 Uracil DNA glycosylase superfamily LJPFL01_RS16130 SM00987 UreE urease accessory protein, C-terminal domain LJPFL01_RS16135 SM00967 RNA 2'-O ribose methyltransferase substrate binding LJPFL01_RS16150 SM01144 LJPFL01_RS16150 LJPFL01_RS16155 SM00881 CoA binding domain LJPFL01_RS16160 SM00155 Phospholipase D. Active site motifs. LJPFL01_RS16195 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS16195 SM01086 C-terminal, D2-small domain, of ClpB protein LJPFL01_RS16205 SM00363 S4 RNA-binding domain LJPFL01_RS16225 SM00830 Chorismate mutase type II LJPFL01_RS16235 SM00830 Chorismate mutase type II LJPFL01_RS16255 SM00267 diguanylate cyclase LJPFL01_RS16295 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS16295 SM00962 SRP54-type protein, GTPase domain LJPFL01_RS16295 SM00963 SRP54-type protein, helical bundle domain LJPFL01_RS16305 SM01091 Transporter associated domain LJPFL01_RS16360 SM00867 YceI-like domain LJPFL01_RS16375 SM00028 Tetratricopeptide repeats LJPFL01_RS16405 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS16490 SM00248 ankyrin repeats LJPFL01_RS16510 SM00528 Domain in histone-like proteins of HNS family LJPFL01_RS16550 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS16570 SM00347 helix_turn_helix multiple antibiotic resistance protein LJPFL01_RS16590 SM00917 LeuA allosteric (dimerisation) domain LJPFL01_RS16595 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS16650 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain LJPFL01_RS16660 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS16680 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS16715 SM00420 helix_turn_helix, Deoxyribose operon repressor LJPFL01_RS16715 SM01134 LJPFL01_RS16715 LJPFL01_RS16725 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LJPFL01_RS16725 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS16730 SM00849 Metallo-beta-lactamase superfamily LJPFL01_RS16755 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS16845 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LJPFL01_RS16845 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS16865 SM00533 DNA-binding domain of DNA mismatch repair MUTS family LJPFL01_RS16865 SM00534 ATPase domain of DNA mismatch repair MUTS family LJPFL01_RS16890 SM00257 Lysin motif LJPFL01_RS16995 SM00893 Electron transfer flavoprotein domain LJPFL01_RS17045 SM01192 LJPFL01_RS17045 LJPFL01_RS17045 SM01193 LJPFL01_RS17045 LJPFL01_RS17060 SM00954 Region found in RelA / SpoT proteins LJPFL01_RS17070 SM00073 Histidine Phosphotransfer domain LJPFL01_RS17070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS17070 SM00387 Histidine kinase-like ATPases LJPFL01_RS17070 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS17070 SM00448 cheY-homologous receiver domain LJPFL01_RS17090 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LJPFL01_RS17095 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain LJPFL01_RS17150 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs LJPFL01_RS17150 SM00475 5'-3' exonuclease LJPFL01_RS17190 SM00925 MltA specific insert domain LJPFL01_RS17210 SM00646 LJPFL01_RS17210 LJPFL01_RS17270 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. LJPFL01_RS17280 SM00927 DNA mismatch repair enzyme MutH LJPFL01_RS17300 SM00563 Phosphate acyltransferases LJPFL01_RS17310 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS17320 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS17320 SM00895 LJPFL01_RS17320 LJPFL01_RS17335 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS17375 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS17465 SM00344 helix_turn_helix ASNC type LJPFL01_RS17500 SM00257 Lysin motif LJPFL01_RS17560 SM01022 LJPFL01_RS17560 LJPFL01_RS17610 SM01011 Aminopeptidase P, N-terminal domain LJPFL01_RS17690 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LJPFL01_RS17695 SM00861 Transketolase, pyrimidine binding domain LJPFL01_RS17735 SM00731 SprT homologues. LJPFL01_RS17760 SM00732 Likely ribonuclease with RNase H fold. LJPFL01_RS17780 SM01152 LJPFL01_RS17780 LJPFL01_RS17790 SM00729 Elongator protein 3, MiaB family, Radical SAM LJPFL01_RS17820 SM00478 endonuclease III LJPFL01_RS17820 SM00525 LJPFL01_RS17820 LJPFL01_RS17870 SM00764 Citrate lyase ligase C-terminal domain LJPFL01_RS17885 SM00091 PAS domain LJPFL01_RS17885 SM00387 Histidine kinase-like ATPases LJPFL01_RS17890 SM00448 cheY-homologous receiver domain LJPFL01_RS17940 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS18035 SM00869 Autotransporter beta-domain LJPFL01_RS18065 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS18070 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS18110 SM00091 PAS domain LJPFL01_RS18110 SM00267 diguanylate cyclase LJPFL01_RS18115 SM00420 helix_turn_helix, Deoxyribose operon repressor LJPFL01_RS18115 SM01134 LJPFL01_RS18115 LJPFL01_RS18125 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS18125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS18185 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS18205 SM00729 Elongator protein 3, MiaB family, Radical SAM LJPFL01_RS18215 SM00563 Phosphate acyltransferases LJPFL01_RS18220 SM00434 DNA Topoisomerase IV LJPFL01_RS18230 SM00448 cheY-homologous receiver domain LJPFL01_RS18230 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS18235 SM00387 Histidine kinase-like ATPases LJPFL01_RS18235 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS18265 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS18290 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS18305 SM00387 Histidine kinase-like ATPases LJPFL01_RS18305 SM00433 TopoisomeraseII LJPFL01_RS18375 SM01118 LJPFL01_RS18375 LJPFL01_RS18385 SM00287 Bacterial SH3 domain homologues LJPFL01_RS18390 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. LJPFL01_RS18400 SM00905 Dihydroneopterin aldolase LJPFL01_RS18405 SM01207 LJPFL01_RS18405 LJPFL01_RS18435 SM00988 UreE urease accessory protein, N-terminal domain LJPFL01_RS18460 SM00400 zinc finger LJPFL01_RS18460 SM00493 LJPFL01_RS18460 LJPFL01_RS18460 SM00766 DNA primase DnaG DnaB-binding LJPFL01_RS18475 SM00986 Uracil DNA glycosylase superfamily LJPFL01_RS18475 SM00987 UreE urease accessory protein, C-terminal domain LJPFL01_RS18560 SM00487 DEAD-like helicases superfamily LJPFL01_RS18580 SM00487 DEAD-like helicases superfamily LJPFL01_RS18580 SM00490 helicase superfamily c-terminal domain LJPFL01_RS18635 SM00091 PAS domain LJPFL01_RS18635 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS18650 SM01120 LJPFL01_RS18650 LJPFL01_RS18660 SM01120 LJPFL01_RS18660 LJPFL01_RS18735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS18735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS18740 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) LJPFL01_RS18740 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). LJPFL01_RS18760 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS18765 SM01038 Beta galactosidase small chain LJPFL01_RS18795 SM01133 LJPFL01_RS18795 LJPFL01_RS18815 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS18855 SM00858 LJPFL01_RS18855 LJPFL01_RS18870 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS18870 SM00895 LJPFL01_RS18870 LJPFL01_RS19000 SM00858 LJPFL01_RS19000 LJPFL01_RS19005 SM00420 helix_turn_helix, Deoxyribose operon repressor LJPFL01_RS19005 SM01134 LJPFL01_RS19005 LJPFL01_RS19080 SM00749 bacterial OsmY and nodulation domain LJPFL01_RS19140 SM00487 DEAD-like helicases superfamily LJPFL01_RS19140 SM00490 helicase superfamily c-terminal domain LJPFL01_RS19145 SM00028 Tetratricopeptide repeats LJPFL01_RS19150 SM00316 Ribosomal protein S1-like RNA-binding domain LJPFL01_RS19150 SM00322 K homology RNA-binding domain LJPFL01_RS19155 SM01387 LJPFL01_RS19155 LJPFL01_RS19175 SM00316 Ribosomal protein S1-like RNA-binding domain LJPFL01_RS19175 SM00322 K homology RNA-binding domain LJPFL01_RS19215 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS19230 SM01103 LJPFL01_RS19230 LJPFL01_RS19245 SM00448 cheY-homologous receiver domain LJPFL01_RS19245 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS19250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS19250 SM00387 Histidine kinase-like ATPases LJPFL01_RS19250 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS19315 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS19345 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS19385 SM00073 Histidine Phosphotransfer domain LJPFL01_RS19385 SM00091 PAS domain LJPFL01_RS19385 SM00387 Histidine kinase-like ATPases LJPFL01_RS19385 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS19385 SM00448 cheY-homologous receiver domain LJPFL01_RS19425 SM00829 Enoylreductase LJPFL01_RS19430 SM01120 LJPFL01_RS19430 LJPFL01_RS19440 SM00729 Elongator protein 3, MiaB family, Radical SAM LJPFL01_RS19475 SM01130 LJPFL01_RS19475 LJPFL01_RS19480 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS19480 SM00895 LJPFL01_RS19480 LJPFL01_RS19520 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LJPFL01_RS19525 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. LJPFL01_RS19595 SM00316 Ribosomal protein S1-like RNA-binding domain LJPFL01_RS19620 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS19620 SM00267 diguanylate cyclase LJPFL01_RS19625 SM00829 Enoylreductase LJPFL01_RS19650 SM00878 Biotin carboxylase C-terminal domain LJPFL01_RS19685 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS19685 SM00267 diguanylate cyclase LJPFL01_RS19710 SM00062 Bacterial periplasmic substrate-binding proteins LJPFL01_RS19725 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS19825 SM00422 helix_turn_helix, mercury resistance LJPFL01_RS19840 SM00662 RNA polymerases D LJPFL01_RS19845 SM00363 S4 RNA-binding domain LJPFL01_RS19845 SM01390 LJPFL01_RS19845 LJPFL01_RS19910 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. LJPFL01_RS19915 SM01374 LJPFL01_RS19915 LJPFL01_RS19935 SM00322 K homology RNA-binding domain LJPFL01_RS19950 SM01382 LJPFL01_RS19950 LJPFL01_RS19950 SM01383 LJPFL01_RS19950 LJPFL01_RS19970 SM01403 LJPFL01_RS19970 LJPFL01_RS20000 SM00838 Elongation factor G C-terminus LJPFL01_RS20000 SM00889 Elongation factor G, domain IV LJPFL01_RS20065 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS20075 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. LJPFL01_RS20140 SM00100 Cyclic nucleotide-monophosphate binding domain LJPFL01_RS20140 SM00419 helix_turn_helix, cAMP Regulatory protein LJPFL01_RS20295 SM00363 S4 RNA-binding domain LJPFL01_RS20310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS20310 SM00387 Histidine kinase-like ATPases LJPFL01_RS20310 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS20315 SM00448 cheY-homologous receiver domain LJPFL01_RS20315 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS20325 SM00316 Ribosomal protein S1-like RNA-binding domain LJPFL01_RS20325 SM00732 Likely ribonuclease with RNase H fold. LJPFL01_RS20330 SM00899 LJPFL01_RS20330 LJPFL01_RS20380 SM00421 helix_turn_helix, Lux Regulon LJPFL01_RS20385 SM00420 helix_turn_helix, Deoxyribose operon repressor LJPFL01_RS20385 SM01134 LJPFL01_RS20385 LJPFL01_RS20395 SM00450 Rhodanese Homology Domain LJPFL01_RS20420 SM00642 Alpha-amylase domain LJPFL01_RS20425 SM00642 Alpha-amylase domain LJPFL01_RS20430 SM00859 Semialdehyde dehydrogenase, NAD binding domain LJPFL01_RS20455 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS20490 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS20515 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS20520 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS20570 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS20575 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS20575 SM00962 SRP54-type protein, GTPase domain LJPFL01_RS20575 SM00963 SRP54-type protein, helical bundle domain LJPFL01_RS20645 SM00563 Phosphate acyltransferases LJPFL01_RS20700 SM00825 Beta-ketoacyl synthase LJPFL01_RS20710 SM00822 LJPFL01_RS20710 LJPFL01_RS20715 SM00825 Beta-ketoacyl synthase LJPFL01_RS20850 SM00822 LJPFL01_RS20850 LJPFL01_RS20880 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS20905 SM00052 Putative diguanylate phosphodiesterase LJPFL01_RS20905 SM00267 diguanylate cyclase LJPFL01_RS20910 SM00028 Tetratricopeptide repeats LJPFL01_RS20965 SM00028 Tetratricopeptide repeats LJPFL01_RS21075 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. LJPFL01_RS21140 SM01061 CAT RNA binding domain LJPFL01_RS21180 SM00341 Helicase and RNase D C-terminal LJPFL01_RS21180 SM00487 DEAD-like helicases superfamily LJPFL01_RS21180 SM00490 helicase superfamily c-terminal domain LJPFL01_RS21180 SM00956 LJPFL01_RS21180 LJPFL01_RS21250 SM01219 LJPFL01_RS21250 LJPFL01_RS21335 SM00984 UDP binding domain LJPFL01_RS21355 SM00357 Cold shock protein domain LJPFL01_RS21355 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS21355 SM00959 Rho termination factor, N-terminal domain LJPFL01_RS21365 SM00487 DEAD-like helicases superfamily LJPFL01_RS21365 SM00490 helicase superfamily c-terminal domain LJPFL01_RS21425 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS21520 SM00859 Semialdehyde dehydrogenase, NAD binding domain LJPFL01_RS21535 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS21610 SM00487 DEAD-like helicases superfamily LJPFL01_RS21610 SM00490 helicase superfamily c-terminal domain LJPFL01_RS21615 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS21630 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS21630 SM01086 C-terminal, D2-small domain, of ClpB protein LJPFL01_RS21730 SM00448 cheY-homologous receiver domain LJPFL01_RS21730 SM00862 Transcriptional regulatory protein, C terminal LJPFL01_RS21735 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain LJPFL01_RS21735 SM00387 Histidine kinase-like ATPases LJPFL01_RS21735 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS21755 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS21760 SM00342 helix_turn_helix, arabinose operon control protein LJPFL01_RS21775 SM01007 Class II Aldolase and Adducin N-terminal domain LJPFL01_RS21785 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS21820 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS21825 SM00530 Helix-turn-helix XRE-family like proteins LJPFL01_RS21870 SM00926 Molybdopterin oxidoreductase Fe4S4 domain LJPFL01_RS21940 SM01230 LJPFL01_RS21940 LJPFL01_RS21945 SM00091 PAS domain LJPFL01_RS21945 SM00387 Histidine kinase-like ATPases LJPFL01_RS21945 SM00388 His Kinase A (phosphoacceptor) domain LJPFL01_RS21950 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS21950 SM00448 cheY-homologous receiver domain LJPFL01_RS21955 SM00729 Elongator protein 3, MiaB family, Radical SAM LJPFL01_RS21975 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs LJPFL01_RS21975 SM00474 3'-5' exonuclease LJPFL01_RS21975 SM00475 5'-3' exonuclease LJPFL01_RS21975 SM00482 DNA polymerase A domain LJPFL01_RS21980 SM00563 Phosphate acyltransferases LJPFL01_RS22030 SM00345 helix_turn_helix gluconate operon transcriptional repressor LJPFL01_RS22030 SM00895 LJPFL01_RS22030 LJPFL01_RS22040 SM00354 helix_turn _helix lactose operon repressor LJPFL01_RS22060 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS22075 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS22080 SM00327 von Willebrand factor (vWF) type A domain LJPFL01_RS22090 SM00344 helix_turn_helix ASNC type LJPFL01_RS22100 SM01228 LJPFL01_RS22100 LJPFL01_RS22145 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS22155 SM00710 Parallel beta-helix repeats LJPFL01_RS22185 SM00382 ATPases associated with a variety of cellular activities LJPFL01_RS22235 SM01234 LJPFL01_RS22235