APT55_RS00005 SM00382 ATPases associated with a variety of cellular activities APT55_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain APT55_RS00025 SM00382 ATPases associated with a variety of cellular activities APT55_RS00030 SM00448 cheY-homologous receiver domain APT55_RS00030 SM00862 Transcriptional regulatory protein, C terminal APT55_RS00055 SM00028 Tetratricopeptide repeats APT55_RS00080 SM00448 cheY-homologous receiver domain APT55_RS00080 SM00862 Transcriptional regulatory protein, C terminal APT55_RS00090 SM00046 Diacylglycerol kinase catalytic domain (presumed) APT55_RS00095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS00095 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS00095 SM00091 PAS domain APT55_RS00095 SM00387 Histidine kinase-like ATPases APT55_RS00095 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS00095 SM00448 cheY-homologous receiver domain APT55_RS00100 SM00267 diguanylate cyclase APT55_RS00100 SM00448 cheY-homologous receiver domain APT55_RS00115 SM00028 Tetratricopeptide repeats APT55_RS00150 SM00822 APT55_RS00150 APT55_RS00180 SM00663 RNA polymerase I subunit A N-terminus APT55_RS00195 SM00360 RNA recognition motif APT55_RS00200 SM00360 RNA recognition motif APT55_RS00210 SM00387 Histidine kinase-like ATPases APT55_RS00210 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS00265 SM00382 ATPases associated with a variety of cellular activities APT55_RS00390 SM00387 Histidine kinase-like ATPases APT55_RS00390 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS00430 SM00382 ATPases associated with a variety of cellular activities APT55_RS00430 SM01086 C-terminal, D2-small domain, of ClpB protein APT55_RS00445 SM00028 Tetratricopeptide repeats APT55_RS00460 SM00235 Zinc-dependent metalloprotease APT55_RS00485 SM00460 Transglutaminase/protease-like homologues APT55_RS00530 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APT55_RS00560 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS00695 SM00507 HNH nucleases APT55_RS00770 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS00770 SM00387 Histidine kinase-like ATPases APT55_RS00770 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS00790 SM00320 WD40 repeats APT55_RS00820 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT55_RS00835 SM01004 Delta-aminolevulinic acid dehydratase APT55_RS00840 SM00897 FIST N domain APT55_RS00840 SM01204 APT55_RS00840 APT55_RS00845 SM00387 Histidine kinase-like ATPases APT55_RS00845 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS00865 SM00836 DALR anticodon binding domain APT55_RS00870 SM00419 helix_turn_helix, cAMP Regulatory protein APT55_RS00895 SM00869 Autotransporter beta-domain APT55_RS00950 SM00240 Forkhead associated domain APT55_RS00975 SM01002 Alanine dehydrogenase/PNT, C-terminal domain APT55_RS00975 SM01003 Alanine dehydrogenase/PNT, N-terminal domain APT55_RS01005 SM00393 Putative single-stranded nucleic acids-binding domain APT55_RS01015 SM00382 ATPases associated with a variety of cellular activities APT55_RS01150 SM00448 cheY-homologous receiver domain APT55_RS01185 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS01195 SM00062 Bacterial periplasmic substrate-binding proteins APT55_RS01215 SM01018 B12 binding domain APT55_RS01220 SM00382 ATPases associated with a variety of cellular activities APT55_RS01230 SM00028 Tetratricopeptide repeats APT55_RS01240 SM00028 Tetratricopeptide repeats APT55_RS01245 SM00316 Ribosomal protein S1-like RNA-binding domain APT55_RS01255 SM00345 helix_turn_helix gluconate operon transcriptional repressor APT55_RS01270 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APT55_RS01270 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APT55_RS01270 SM00493 APT55_RS01270 APT55_RS01280 SM00382 ATPases associated with a variety of cellular activities APT55_RS01280 SM01086 C-terminal, D2-small domain, of ClpB protein APT55_RS01290 SM00912 haemagglutination activity domain APT55_RS01295 SM00320 WD40 repeats APT55_RS01300 SM00244 prohibitin homologues APT55_RS01310 SM00331 Sigma factor PP2C-like phosphatases APT55_RS01310 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain APT55_RS01325 SM00091 PAS domain APT55_RS01325 SM00387 Histidine kinase-like ATPases APT55_RS01325 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS01420 SM00382 ATPases associated with a variety of cellular activities APT55_RS01440 SM00382 ATPases associated with a variety of cellular activities APT55_RS01445 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. APT55_RS01460 SM00091 PAS domain APT55_RS01460 SM00267 diguanylate cyclase APT55_RS01460 SM01080 APT55_RS01460 APT55_RS01475 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain APT55_RS01480 SM01005 Alanine racemase, C-terminal domain APT55_RS01500 SM00925 MltA specific insert domain APT55_RS01555 SM00382 ATPases associated with a variety of cellular activities APT55_RS01565 SM00448 cheY-homologous receiver domain APT55_RS01570 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS01595 SM00382 ATPases associated with a variety of cellular activities APT55_RS01640 SM00387 Histidine kinase-like ATPases APT55_RS01640 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS01640 SM00448 cheY-homologous receiver domain APT55_RS01680 SM00382 ATPases associated with a variety of cellular activities APT55_RS01710 SM00305 Hint (Hedgehog/Intein) domain C-terminal region APT55_RS01710 SM00306 Hint (Hedgehog/Intein) domain N-terminal region APT55_RS01720 SM00823 Phosphopantetheine attachment site APT55_RS01740 SM00028 Tetratricopeptide repeats APT55_RS01745 SM00382 ATPases associated with a variety of cellular activities APT55_RS01755 SM00382 ATPases associated with a variety of cellular activities APT55_RS01780 SM00903 Flavin reductase like domain APT55_RS01865 SM00271 DnaJ molecular chaperone homology domain APT55_RS01890 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS01890 SM00448 cheY-homologous receiver domain APT55_RS01895 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS01895 SM00448 cheY-homologous receiver domain APT55_RS01900 SM00387 Histidine kinase-like ATPases APT55_RS01900 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS01900 SM00448 cheY-homologous receiver domain APT55_RS01950 SM00116 Domain in cystathionine beta-synthase and other proteins. APT55_RS02020 SM00028 Tetratricopeptide repeats APT55_RS02020 SM00271 DnaJ molecular chaperone homology domain APT55_RS02030 SM00788 Adenylosuccinate synthetase APT55_RS02065 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS02075 SM00507 HNH nucleases APT55_RS02080 SM00448 cheY-homologous receiver domain APT55_RS02080 SM00862 Transcriptional regulatory protein, C terminal APT55_RS02090 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS02090 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS02090 SM00091 PAS domain APT55_RS02090 SM00387 Histidine kinase-like ATPases APT55_RS02090 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS02120 SM01240 APT55_RS02120 APT55_RS02185 SM00320 WD40 repeats APT55_RS02190 SM00421 helix_turn_helix, Lux Regulon APT55_RS02190 SM00448 cheY-homologous receiver domain APT55_RS02235 SM00382 ATPases associated with a variety of cellular activities APT55_RS02235 SM00393 Putative single-stranded nucleic acids-binding domain APT55_RS02320 SM00382 ATPases associated with a variety of cellular activities APT55_RS02330 SM00448 cheY-homologous receiver domain APT55_RS02375 SM00563 Phosphate acyltransferases APT55_RS02395 SM00642 Alpha-amylase domain APT55_RS02435 SM00331 Sigma factor PP2C-like phosphatases APT55_RS02435 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain APT55_RS02455 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS02520 SM00116 Domain in cystathionine beta-synthase and other proteins. APT55_RS02535 SM00382 ATPases associated with a variety of cellular activities APT55_RS02555 SM00320 WD40 repeats APT55_RS02575 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. APT55_RS02630 SM00448 cheY-homologous receiver domain APT55_RS02635 SM00448 cheY-homologous receiver domain APT55_RS02640 SM00260 Two component signalling adaptor domain APT55_RS02650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APT55_RS02650 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS02655 SM00073 Histidine Phosphotransfer domain APT55_RS02655 SM00260 Two component signalling adaptor domain APT55_RS02655 SM00387 Histidine kinase-like ATPases APT55_RS02655 SM00448 cheY-homologous receiver domain APT55_RS02655 SM01231 APT55_RS02655 APT55_RS02670 SM00062 Bacterial periplasmic substrate-binding proteins APT55_RS02750 SM00382 ATPases associated with a variety of cellular activities APT55_RS02770 SM00028 Tetratricopeptide repeats APT55_RS02780 SM00062 Bacterial periplasmic substrate-binding proteins APT55_RS02795 SM00347 helix_turn_helix multiple antibiotic resistance protein APT55_RS02825 SM00062 Bacterial periplasmic substrate-binding proteins APT55_RS02850 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS02850 SM00287 Bacterial SH3 domain homologues APT55_RS02870 SM00382 ATPases associated with a variety of cellular activities APT55_RS02935 SM00014 Acid phosphatase homologues APT55_RS02965 SM00382 ATPases associated with a variety of cellular activities APT55_RS03065 SM00244 prohibitin homologues APT55_RS03075 SM00930 APT55_RS03075 APT55_RS03090 SM00450 Rhodanese Homology Domain APT55_RS03095 SM00822 APT55_RS03095 APT55_RS03145 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT55_RS03190 SM00382 ATPases associated with a variety of cellular activities APT55_RS03225 SM00855 Phosphoglycerate mutase family APT55_RS03260 SM00028 Tetratricopeptide repeats APT55_RS03270 SM00387 Histidine kinase-like ATPases APT55_RS03270 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS03270 SM00448 cheY-homologous receiver domain APT55_RS03270 SM01080 APT55_RS03270 APT55_RS03275 SM00387 Histidine kinase-like ATPases APT55_RS03275 SM00448 cheY-homologous receiver domain APT55_RS03335 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APT55_RS03340 SM00567 E-Z type HEAT repeats APT55_RS03405 SM00255 Toll - interleukin 1 - resistance APT55_RS03405 SM00320 WD40 repeats APT55_RS03550 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APT55_RS03560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APT55_RS03580 SM00387 Histidine kinase-like ATPases APT55_RS03580 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS03580 SM00448 cheY-homologous receiver domain APT55_RS03585 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS03585 SM00091 PAS domain APT55_RS03585 SM00387 Histidine kinase-like ATPases APT55_RS03585 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS03585 SM00448 cheY-homologous receiver domain APT55_RS03595 SM00116 Domain in cystathionine beta-synthase and other proteins. APT55_RS03595 SM01093 APT55_RS03595 APT55_RS03625 SM00831 Cation transporter/ATPase, N-terminus APT55_RS03730 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS03750 SM00028 Tetratricopeptide repeats APT55_RS03765 SM00316 Ribosomal protein S1-like RNA-binding domain APT55_RS03765 SM00322 K homology RNA-binding domain APT55_RS03770 SM00487 DEAD-like helicases superfamily APT55_RS03770 SM00490 helicase superfamily c-terminal domain APT55_RS03845 SM00091 PAS domain APT55_RS03845 SM00387 Histidine kinase-like ATPases APT55_RS03845 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS03855 SM00849 Metallo-beta-lactamase superfamily APT55_RS03880 SM00382 ATPases associated with a variety of cellular activities APT55_RS03935 SM00382 ATPases associated with a variety of cellular activities APT55_RS03945 SM00448 cheY-homologous receiver domain APT55_RS03950 SM00448 cheY-homologous receiver domain APT55_RS03955 SM00260 Two component signalling adaptor domain APT55_RS03960 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS03960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APT55_RS03960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS03965 SM00073 Histidine Phosphotransfer domain APT55_RS03965 SM00260 Two component signalling adaptor domain APT55_RS03965 SM00387 Histidine kinase-like ATPases APT55_RS03965 SM00448 cheY-homologous receiver domain APT55_RS03965 SM01231 APT55_RS03965 APT55_RS03975 SM00822 APT55_RS03975 APT55_RS03990 SM00382 ATPases associated with a variety of cellular activities APT55_RS04075 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family APT55_RS04190 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS04240 SM00732 Likely ribonuclease with RNase H fold. APT55_RS04250 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS04250 SM00419 helix_turn_helix, cAMP Regulatory protein APT55_RS04260 SM00327 von Willebrand factor (vWF) type A domain APT55_RS04280 SM00450 Rhodanese Homology Domain APT55_RS04290 SM00421 helix_turn_helix, Lux Regulon APT55_RS04325 SM00028 Tetratricopeptide repeats APT55_RS04360 SM00320 WD40 repeats APT55_RS04365 SM00646 APT55_RS04365 APT55_RS04430 SM00487 DEAD-like helicases superfamily APT55_RS04430 SM00490 helicase superfamily c-terminal domain APT55_RS04455 SM00345 helix_turn_helix gluconate operon transcriptional repressor APT55_RS04455 SM00866 APT55_RS04455 APT55_RS04470 SM01230 APT55_RS04470 APT55_RS04480 SM00342 helix_turn_helix, arabinose operon control protein APT55_RS04500 SM00387 Histidine kinase-like ATPases APT55_RS04505 SM00062 Bacterial periplasmic substrate-binding proteins APT55_RS04505 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. APT55_RS04510 SM00062 Bacterial periplasmic substrate-binding proteins APT55_RS04510 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. APT55_RS04515 SM00382 ATPases associated with a variety of cellular activities APT55_RS04585 SM00091 PAS domain APT55_RS04595 SM00387 Histidine kinase-like ATPases APT55_RS04595 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS04645 SM00255 Toll - interleukin 1 - resistance APT55_RS04655 SM00507 HNH nucleases APT55_RS04695 SM00986 Uracil DNA glycosylase superfamily APT55_RS04695 SM00987 UreE urease accessory protein, C-terminal domain APT55_RS04710 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS04710 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS04710 SM00091 PAS domain APT55_RS04710 SM00387 Histidine kinase-like ATPases APT55_RS04710 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS04710 SM00448 cheY-homologous receiver domain APT55_RS04730 SM00320 WD40 repeats APT55_RS04740 SM00347 helix_turn_helix multiple antibiotic resistance protein APT55_RS04755 SM00382 ATPases associated with a variety of cellular activities APT55_RS04760 SM00849 Metallo-beta-lactamase superfamily APT55_RS04775 SM00646 APT55_RS04775 APT55_RS04865 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS04865 SM00419 helix_turn_helix, cAMP Regulatory protein APT55_RS04880 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS04880 SM00091 PAS domain APT55_RS04880 SM00387 Histidine kinase-like ATPases APT55_RS04885 SM00387 Histidine kinase-like ATPases APT55_RS04885 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS04885 SM00448 cheY-homologous receiver domain APT55_RS04890 SM00448 cheY-homologous receiver domain APT55_RS04905 SM00093 SERine Proteinase INhibitors APT55_RS04910 SM00320 WD40 repeats APT55_RS04915 SM00421 helix_turn_helix, Lux Regulon APT55_RS04945 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS04975 SM00382 ATPases associated with a variety of cellular activities APT55_RS05015 SM00052 Putative diguanylate phosphodiesterase APT55_RS05015 SM00267 diguanylate cyclase APT55_RS05015 SM00448 cheY-homologous receiver domain APT55_RS05025 SM00320 WD40 repeats APT55_RS05035 SM00091 PAS domain APT55_RS05035 SM00387 Histidine kinase-like ATPases APT55_RS05040 SM00091 PAS domain APT55_RS05040 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS05040 SM00448 cheY-homologous receiver domain APT55_RS05050 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS05050 SM00387 Histidine kinase-like ATPases APT55_RS05050 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS05050 SM00448 cheY-homologous receiver domain APT55_RS05055 SM00091 PAS domain APT55_RS05055 SM00448 cheY-homologous receiver domain APT55_RS05060 SM00138 Methyltransferase, chemotaxis proteins APT55_RS05065 SM00448 cheY-homologous receiver domain APT55_RS05075 SM00642 Alpha-amylase domain APT55_RS05135 SM00028 Tetratricopeptide repeats APT55_RS05160 SM00642 Alpha-amylase domain APT55_RS05180 SM00957 SecA DEAD-like domain APT55_RS05180 SM00958 SecA preprotein cross-linking domain APT55_RS05240 SM00028 Tetratricopeptide repeats APT55_RS05250 SM00822 APT55_RS05250 APT55_RS05295 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APT55_RS05355 SM00382 ATPases associated with a variety of cellular activities APT55_RS05410 SM00448 cheY-homologous receiver domain APT55_RS05410 SM00862 Transcriptional regulatory protein, C terminal APT55_RS05415 SM00091 PAS domain APT55_RS05415 SM00387 Histidine kinase-like ATPases APT55_RS05415 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS05415 SM00448 cheY-homologous receiver domain APT55_RS05420 SM00448 cheY-homologous receiver domain APT55_RS05430 SM00387 Histidine kinase-like ATPases APT55_RS05430 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS05430 SM01080 APT55_RS05430 APT55_RS05470 SM00382 ATPases associated with a variety of cellular activities APT55_RS05480 SM00255 Toll - interleukin 1 - resistance APT55_RS05485 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain APT55_RS05485 SM01232 APT55_RS05485 APT55_RS05490 SM00481 DNA polymerase alpha chain like domain APT55_RS05520 SM01080 APT55_RS05520 APT55_RS05665 SM00028 Tetratricopeptide repeats APT55_RS05715 SM00961 Ribulose bisphosphate carboxylase, small chain APT55_RS05725 SM00877 APT55_RS05725 APT55_RS05730 SM00877 APT55_RS05730 APT55_RS05770 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. APT55_RS05815 SM00465 GIY-YIG type nucleases (URI domain) APT55_RS05825 SM00255 Toll - interleukin 1 - resistance APT55_RS05910 SM00448 cheY-homologous receiver domain APT55_RS05910 SM00862 Transcriptional regulatory protein, C terminal APT55_RS06030 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS06035 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS06100 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS06105 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS06145 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS06145 SM00387 Histidine kinase-like ATPases APT55_RS06220 SM00465 GIY-YIG type nucleases (URI domain) APT55_RS06315 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS06435 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS06495 SM00316 Ribosomal protein S1-like RNA-binding domain APT55_RS06505 SM00448 cheY-homologous receiver domain APT55_RS06535 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain APT55_RS06535 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS06535 SM00387 Histidine kinase-like ATPases APT55_RS06535 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS06535 SM00448 cheY-homologous receiver domain APT55_RS06570 SM00028 Tetratricopeptide repeats APT55_RS06600 SM00271 DnaJ molecular chaperone homology domain APT55_RS06625 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS06665 SM00829 Enoylreductase APT55_RS06855 SM00271 DnaJ molecular chaperone homology domain APT55_RS06880 SM00363 S4 RNA-binding domain APT55_RS06885 SM00116 Domain in cystathionine beta-synthase and other proteins. APT55_RS06900 SM01211 APT55_RS06900 APT55_RS06920 SM00387 Histidine kinase-like ATPases APT55_RS06920 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS06920 SM00448 cheY-homologous receiver domain APT55_RS06925 SM00387 Histidine kinase-like ATPases APT55_RS06925 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS06925 SM00448 cheY-homologous receiver domain APT55_RS06945 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APT55_RS06945 SM00954 Region found in RelA / SpoT proteins APT55_RS06965 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain APT55_RS06965 SM01232 APT55_RS06965 APT55_RS07040 SM00833 Cobalamin synthesis protein cobW C-terminal domain APT55_RS07065 SM01116 APT55_RS07065 APT55_RS07070 SM00382 ATPases associated with a variety of cellular activities APT55_RS07110 SM00831 Cation transporter/ATPase, N-terminus APT55_RS07115 SM00382 ATPases associated with a variety of cellular activities APT55_RS07120 SM00382 ATPases associated with a variety of cellular activities APT55_RS07125 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS07125 SM00387 Histidine kinase-like ATPases APT55_RS07125 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS07125 SM00448 cheY-homologous receiver domain APT55_RS07130 SM01236 APT55_RS07130 APT55_RS07155 SM00382 ATPases associated with a variety of cellular activities APT55_RS07175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS07175 SM00387 Histidine kinase-like ATPases APT55_RS07175 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS07180 SM00448 cheY-homologous receiver domain APT55_RS07180 SM00862 Transcriptional regulatory protein, C terminal APT55_RS07195 SM00822 APT55_RS07195 APT55_RS07245 SM00382 ATPases associated with a variety of cellular activities APT55_RS07255 SM00320 WD40 repeats APT55_RS07260 SM00833 Cobalamin synthesis protein cobW C-terminal domain APT55_RS07270 SM01004 Delta-aminolevulinic acid dehydratase APT55_RS07300 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APT55_RS07310 SM00833 Cobalamin synthesis protein cobW C-terminal domain APT55_RS07320 SM00833 Cobalamin synthesis protein cobW C-terminal domain APT55_RS07330 SM00961 Ribulose bisphosphate carboxylase, small chain APT55_RS07335 SM00840 APT55_RS07335 APT55_RS07385 SM00382 ATPases associated with a variety of cellular activities APT55_RS07395 SM00028 Tetratricopeptide repeats APT55_RS07400 SM00912 haemagglutination activity domain APT55_RS07405 SM00912 haemagglutination activity domain APT55_RS07410 SM00912 haemagglutination activity domain APT55_RS07425 SM00360 RNA recognition motif APT55_RS07440 SM01248 APT55_RS07440 APT55_RS07445 SM01247 APT55_RS07445 APT55_RS07450 SM00387 Histidine kinase-like ATPases APT55_RS07450 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS07450 SM00448 cheY-homologous receiver domain APT55_RS07510 SM00878 Biotin carboxylase C-terminal domain APT55_RS07580 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS07580 SM00091 PAS domain APT55_RS07580 SM00387 Histidine kinase-like ATPases APT55_RS07580 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS07580 SM00448 cheY-homologous receiver domain APT55_RS07590 SM00138 Methyltransferase, chemotaxis proteins APT55_RS07600 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS07600 SM00091 PAS domain APT55_RS07600 SM00387 Histidine kinase-like ATPases APT55_RS07600 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS07605 SM00387 Histidine kinase-like ATPases APT55_RS07605 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS07605 SM00448 cheY-homologous receiver domain APT55_RS07620 SM01001 AIR carboxylase APT55_RS07640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS07640 SM00387 Histidine kinase-like ATPases APT55_RS07640 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS07655 SM00849 Metallo-beta-lactamase superfamily APT55_RS07680 SM01207 APT55_RS07680 APT55_RS07730 SM00255 Toll - interleukin 1 - resistance APT55_RS07730 SM00320 WD40 repeats APT55_RS07760 SM00861 Transketolase, pyrimidine binding domain APT55_RS07785 SM00955 APT55_RS07785 APT55_RS07810 SM01116 APT55_RS07810 APT55_RS07825 SM00327 von Willebrand factor (vWF) type A domain APT55_RS07855 SM00933 APT55_RS07855 APT55_RS07890 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS07890 SM00876 Biotin and Thiamin Synthesis associated domain APT55_RS07895 SM00028 Tetratricopeptide repeats APT55_RS07915 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain APT55_RS07950 SM00947 Carbonic anhydrase APT55_RS07960 SM00382 ATPases associated with a variety of cellular activities APT55_RS07965 SM00382 ATPases associated with a variety of cellular activities APT55_RS08000 SM00342 helix_turn_helix, arabinose operon control protein APT55_RS08005 SM00342 helix_turn_helix, arabinose operon control protein APT55_RS08010 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS08010 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS08010 SM00091 PAS domain APT55_RS08010 SM00387 Histidine kinase-like ATPases APT55_RS08010 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS08010 SM00448 cheY-homologous receiver domain APT55_RS08080 SM00796 Allophanate hydrolase subunit 1 APT55_RS08080 SM00797 Allophanate hydrolase subunit 2 APT55_RS08080 SM00878 Biotin carboxylase C-terminal domain APT55_RS08100 SM00382 ATPases associated with a variety of cellular activities APT55_RS08110 SM01230 APT55_RS08110 APT55_RS08115 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS08115 SM00091 PAS domain APT55_RS08115 SM00387 Histidine kinase-like ATPases APT55_RS08115 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS08115 SM00448 cheY-homologous receiver domain APT55_RS08120 SM00091 PAS domain APT55_RS08120 SM00387 Histidine kinase-like ATPases APT55_RS08120 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS08120 SM00448 cheY-homologous receiver domain APT55_RS08165 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT55_RS08185 SM00450 Rhodanese Homology Domain APT55_RS08190 SM00232 JAB/MPN domain APT55_RS08230 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain APT55_RS08240 SM00535 Ribonuclease III family APT55_RS08245 SM00967 RNA 2'-O ribose methyltransferase substrate binding APT55_RS08305 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS08310 SM00387 Histidine kinase-like ATPases APT55_RS08310 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS08310 SM01080 APT55_RS08310 APT55_RS08355 SM00382 ATPases associated with a variety of cellular activities APT55_RS08360 SM00382 ATPases associated with a variety of cellular activities APT55_RS08430 SM00487 DEAD-like helicases superfamily APT55_RS08435 SM00507 HNH nucleases APT55_RS08445 SM00450 Rhodanese Homology Domain APT55_RS08450 SM00487 DEAD-like helicases superfamily APT55_RS08450 SM00490 helicase superfamily c-terminal domain APT55_RS08480 SM00255 Toll - interleukin 1 - resistance APT55_RS08560 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS08565 SM00873 B3/4 domain APT55_RS08565 SM00874 tRNA synthetase B5 domain APT55_RS08565 SM00896 Ferredoxin-fold anticodon binding domain APT55_RS08575 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain APT55_RS08575 SM01080 APT55_RS08575 APT55_RS08585 SM00028 Tetratricopeptide repeats APT55_RS08655 SM00028 Tetratricopeptide repeats APT55_RS08715 SM00255 Toll - interleukin 1 - resistance APT55_RS08735 SM00450 Rhodanese Homology Domain APT55_RS08765 SM00382 ATPases associated with a variety of cellular activities APT55_RS08785 SM00271 DnaJ molecular chaperone homology domain APT55_RS08820 SM00382 ATPases associated with a variety of cellular activities APT55_RS08830 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS08855 SM00382 ATPases associated with a variety of cellular activities APT55_RS08865 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS08875 SM00028 Tetratricopeptide repeats APT55_RS08895 SM00641 Glycosyl hydrolases family 25 APT55_RS08910 SM00382 ATPases associated with a variety of cellular activities APT55_RS08930 SM00327 von Willebrand factor (vWF) type A domain APT55_RS08930 SM00382 ATPases associated with a variety of cellular activities APT55_RS08965 SM00937 APT55_RS08965 APT55_RS08990 SM00382 ATPases associated with a variety of cellular activities APT55_RS08995 SM00387 Histidine kinase-like ATPases APT55_RS08995 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS09010 SM00507 HNH nucleases APT55_RS09095 SM00028 Tetratricopeptide repeats APT55_RS09145 SM00316 Ribosomal protein S1-like RNA-binding domain APT55_RS09165 SM00662 RNA polymerases D APT55_RS09195 SM00937 APT55_RS09195 APT55_RS09235 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase APT55_RS09255 SM00448 cheY-homologous receiver domain APT55_RS09265 SM00465 GIY-YIG type nucleases (URI domain) APT55_RS09270 SM00481 DNA polymerase alpha chain like domain APT55_RS09275 SM00387 Histidine kinase-like ATPases APT55_RS09280 SM00421 helix_turn_helix, Lux Regulon APT55_RS09280 SM00448 cheY-homologous receiver domain APT55_RS09300 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS09300 SM00387 Histidine kinase-like ATPases APT55_RS09300 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS09385 SM00411 bacterial (prokaryotic) histone like domain APT55_RS09435 SM00387 Histidine kinase-like ATPases APT55_RS09475 SM00382 ATPases associated with a variety of cellular activities APT55_RS09505 SM00320 WD40 repeats APT55_RS09525 SM00728 Clostridial hydrophobic, with a conserved W residue, domain. APT55_RS09530 SM00028 Tetratricopeptide repeats APT55_RS09540 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT55_RS09545 SM00478 endonuclease III APT55_RS09545 SM00525 APT55_RS09545 APT55_RS09590 SM00240 Forkhead associated domain APT55_RS09610 SM01236 APT55_RS09610 APT55_RS09615 SM00823 Phosphopantetheine attachment site APT55_RS09620 SM00823 Phosphopantetheine attachment site APT55_RS09625 SM00823 Phosphopantetheine attachment site APT55_RS09630 SM00316 Ribosomal protein S1-like RNA-binding domain APT55_RS09630 SM00732 Likely ribonuclease with RNase H fold. APT55_RS09675 SM00028 Tetratricopeptide repeats APT55_RS09685 SM00480 DNA polymerase III beta subunit APT55_RS09700 SM00382 ATPases associated with a variety of cellular activities APT55_RS09720 SM00387 Histidine kinase-like ATPases APT55_RS09720 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS09720 SM00448 cheY-homologous receiver domain APT55_RS09770 SM00382 ATPases associated with a variety of cellular activities APT55_RS09775 SM00382 ATPases associated with a variety of cellular activities APT55_RS09785 SM00842 Cell division protein FtsA APT55_RS09815 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS09835 SM00460 Transglutaminase/protease-like homologues APT55_RS09875 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS09975 SM00448 cheY-homologous receiver domain APT55_RS09975 SM00862 Transcriptional regulatory protein, C terminal APT55_RS09980 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS09980 SM00091 PAS domain APT55_RS09980 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS09980 SM00448 cheY-homologous receiver domain APT55_RS09990 SM00387 Histidine kinase-like ATPases APT55_RS10000 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS10005 SM00260 Two component signalling adaptor domain APT55_RS10010 SM00028 Tetratricopeptide repeats APT55_RS10010 SM00138 Methyltransferase, chemotaxis proteins APT55_RS10015 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APT55_RS10015 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS10020 SM00260 Two component signalling adaptor domain APT55_RS10025 SM00073 Histidine Phosphotransfer domain APT55_RS10025 SM00260 Two component signalling adaptor domain APT55_RS10025 SM00387 Histidine kinase-like ATPases APT55_RS10025 SM00448 cheY-homologous receiver domain APT55_RS10025 SM01231 APT55_RS10025 APT55_RS10030 SM00448 cheY-homologous receiver domain APT55_RS10035 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain APT55_RS10035 SM00448 cheY-homologous receiver domain APT55_RS10040 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APT55_RS10065 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS10065 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS10065 SM00091 PAS domain APT55_RS10065 SM00387 Histidine kinase-like ATPases APT55_RS10065 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS10110 SM00387 Histidine kinase-like ATPases APT55_RS10110 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS10130 SM00967 RNA 2'-O ribose methyltransferase substrate binding APT55_RS10160 SM00360 RNA recognition motif APT55_RS10180 SM00382 ATPases associated with a variety of cellular activities APT55_RS10220 SM00959 Rho termination factor, N-terminal domain APT55_RS10245 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS10245 SM00073 Histidine Phosphotransfer domain APT55_RS10245 SM00387 Histidine kinase-like ATPases APT55_RS10245 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS10245 SM00448 cheY-homologous receiver domain APT55_RS10270 SM00448 cheY-homologous receiver domain APT55_RS10275 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS10275 SM00091 PAS domain APT55_RS10275 SM00387 Histidine kinase-like ATPases APT55_RS10275 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS10275 SM00448 cheY-homologous receiver domain APT55_RS10280 SM00091 PAS domain APT55_RS10280 SM00387 Histidine kinase-like ATPases APT55_RS10280 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS10280 SM00448 cheY-homologous receiver domain APT55_RS10290 SM00448 cheY-homologous receiver domain APT55_RS10300 SM00073 Histidine Phosphotransfer domain APT55_RS10300 SM00260 Two component signalling adaptor domain APT55_RS10300 SM00387 Histidine kinase-like ATPases APT55_RS10300 SM01231 APT55_RS10300 APT55_RS10305 SM00260 Two component signalling adaptor domain APT55_RS10310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APT55_RS10310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS10315 SM00448 cheY-homologous receiver domain APT55_RS10320 SM00138 Methyltransferase, chemotaxis proteins APT55_RS10325 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS10325 SM00091 PAS domain APT55_RS10325 SM00387 Histidine kinase-like ATPases APT55_RS10325 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS10325 SM00448 cheY-homologous receiver domain APT55_RS10330 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT55_RS10345 SM00382 ATPases associated with a variety of cellular activities APT55_RS10380 SM00382 ATPases associated with a variety of cellular activities APT55_RS10410 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain APT55_RS10445 SM00877 APT55_RS10445 APT55_RS10460 SM00028 Tetratricopeptide repeats APT55_RS10480 SM00855 Phosphoglycerate mutase family APT55_RS10485 SM00567 E-Z type HEAT repeats APT55_RS10500 SM00642 Alpha-amylase domain APT55_RS10555 SM00849 Metallo-beta-lactamase superfamily APT55_RS10580 SM00116 Domain in cystathionine beta-synthase and other proteins. APT55_RS10590 SM01359 APT55_RS10590 APT55_RS10590 SM01360 APT55_RS10590 APT55_RS10635 SM00382 ATPases associated with a variety of cellular activities APT55_RS10730 SM01228 APT55_RS10730 APT55_RS10770 SM00345 helix_turn_helix gluconate operon transcriptional repressor APT55_RS10770 SM00895 APT55_RS10770 APT55_RS10775 SM00331 Sigma factor PP2C-like phosphatases APT55_RS10780 SM00382 ATPases associated with a variety of cellular activities APT55_RS10780 SM00962 SRP54-type protein, GTPase domain APT55_RS10780 SM00963 SRP54-type protein, helical bundle domain APT55_RS10800 SM00448 cheY-homologous receiver domain APT55_RS10800 SM00862 Transcriptional regulatory protein, C terminal APT55_RS10830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS10830 SM00387 Histidine kinase-like ATPases APT55_RS10980 SM00563 Phosphate acyltransferases APT55_RS10990 SM00698 Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases. APT55_RS10995 SM00226 Low molecular weight phosphatase family APT55_RS11005 SM00478 endonuclease III APT55_RS11015 SM00421 helix_turn_helix, Lux Regulon APT55_RS11015 SM00448 cheY-homologous receiver domain APT55_RS11045 SM00933 APT55_RS11045 APT55_RS11070 SM00382 ATPases associated with a variety of cellular activities APT55_RS11085 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS11085 SM00091 PAS domain APT55_RS11085 SM00387 Histidine kinase-like ATPases APT55_RS11085 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS11085 SM00448 cheY-homologous receiver domain APT55_RS11090 SM00448 cheY-homologous receiver domain APT55_RS11095 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS11095 SM00387 Histidine kinase-like ATPases APT55_RS11095 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS11100 SM00448 cheY-homologous receiver domain APT55_RS11155 SM00028 Tetratricopeptide repeats APT55_RS11165 SM00382 ATPases associated with a variety of cellular activities APT55_RS11185 SM00382 ATPases associated with a variety of cellular activities APT55_RS11185 SM01086 C-terminal, D2-small domain, of ClpB protein APT55_RS11255 SM00091 PAS domain APT55_RS11255 SM00138 Methyltransferase, chemotaxis proteins APT55_RS11265 SM00091 PAS domain APT55_RS11265 SM00387 Histidine kinase-like ATPases APT55_RS11265 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS11275 SM01093 APT55_RS11275 APT55_RS11280 SM00567 E-Z type HEAT repeats APT55_RS11335 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT55_RS11335 SM00245 tail specific protease APT55_RS11365 SM00382 ATPases associated with a variety of cellular activities APT55_RS11405 SM00493 APT55_RS11405 APT55_RS11415 SM00382 ATPases associated with a variety of cellular activities APT55_RS11490 SM00382 ATPases associated with a variety of cellular activities APT55_RS11490 SM01086 C-terminal, D2-small domain, of ClpB protein APT55_RS11500 SM00360 RNA recognition motif APT55_RS11520 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. APT55_RS11530 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS11580 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS11705 SM00899 APT55_RS11705 APT55_RS11730 SM00382 ATPases associated with a variety of cellular activities APT55_RS11770 SM00881 CoA binding domain APT55_RS11810 SM01043 Bacterial transcriptional activator domain APT55_RS11815 SM00028 Tetratricopeptide repeats APT55_RS11820 SM00382 ATPases associated with a variety of cellular activities APT55_RS11835 SM00382 ATPases associated with a variety of cellular activities APT55_RS11850 SM00877 APT55_RS11850 APT55_RS11860 SM01118 APT55_RS11860 APT55_RS11895 SM00028 Tetratricopeptide repeats APT55_RS11950 SM00155 Phospholipase D. Active site motifs. APT55_RS11950 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APT55_RS11985 SM00825 Beta-ketoacyl synthase APT55_RS11995 SM00859 Semialdehyde dehydrogenase, NAD binding domain APT55_RS12005 SM00091 PAS domain APT55_RS12005 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS12005 SM00387 Histidine kinase-like ATPases APT55_RS12005 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS12010 SM01209 APT55_RS12010 APT55_RS12010 SM01210 APT55_RS12010 APT55_RS12015 SM00028 Tetratricopeptide repeats APT55_RS12020 SM00028 Tetratricopeptide repeats APT55_RS12020 SM00255 Toll - interleukin 1 - resistance APT55_RS12035 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS12035 SM00387 Histidine kinase-like ATPases APT55_RS12035 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS12040 SM00382 ATPases associated with a variety of cellular activities APT55_RS12080 SM00567 E-Z type HEAT repeats APT55_RS12110 SM00382 ATPases associated with a variety of cellular activities APT55_RS12115 SM00382 ATPases associated with a variety of cellular activities APT55_RS12125 SM00926 Molybdopterin oxidoreductase Fe4S4 domain APT55_RS12135 SM00450 Rhodanese Homology Domain APT55_RS12195 SM01002 Alanine dehydrogenase/PNT, C-terminal domain APT55_RS12195 SM01003 Alanine dehydrogenase/PNT, N-terminal domain APT55_RS12200 SM00562 APT55_RS12200 APT55_RS12230 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain APT55_RS12260 SM00448 cheY-homologous receiver domain APT55_RS12265 SM00421 helix_turn_helix, Lux Regulon APT55_RS12265 SM00448 cheY-homologous receiver domain APT55_RS12285 SM00028 Tetratricopeptide repeats APT55_RS12305 SM01133 APT55_RS12305 APT55_RS12430 SM00961 Ribulose bisphosphate carboxylase, small chain APT55_RS12455 SM00448 cheY-homologous receiver domain APT55_RS12490 SM00271 DnaJ molecular chaperone homology domain APT55_RS12505 SM00382 ATPases associated with a variety of cellular activities APT55_RS12510 SM00382 ATPases associated with a variety of cellular activities APT55_RS12545 SM00387 Histidine kinase-like ATPases APT55_RS12545 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS12545 SM00448 cheY-homologous receiver domain APT55_RS12565 SM01011 Aminopeptidase P, N-terminal domain APT55_RS12620 SM00382 ATPases associated with a variety of cellular activities APT55_RS12645 SM00448 cheY-homologous receiver domain APT55_RS12650 SM00434 DNA Topoisomerase IV APT55_RS12810 SM00833 Cobalamin synthesis protein cobW C-terminal domain APT55_RS12815 SM00840 APT55_RS12815 APT55_RS12900 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS12900 SM00091 PAS domain APT55_RS12900 SM00387 Histidine kinase-like ATPases APT55_RS12900 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS12905 SM00487 DEAD-like helicases superfamily APT55_RS12905 SM00490 helicase superfamily c-terminal domain APT55_RS12910 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS12915 SM00567 E-Z type HEAT repeats APT55_RS12935 SM00382 ATPases associated with a variety of cellular activities APT55_RS12980 SM00341 Helicase and RNase D C-terminal APT55_RS12980 SM00487 DEAD-like helicases superfamily APT55_RS12980 SM00490 helicase superfamily c-terminal domain APT55_RS12980 SM00956 APT55_RS12980 APT55_RS13005 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APT55_RS13005 SM00292 breast cancer carboxy-terminal domain APT55_RS13005 SM00532 Ligase N family APT55_RS13025 SM00422 helix_turn_helix, mercury resistance APT55_RS13050 SM00567 E-Z type HEAT repeats APT55_RS13090 SM01207 APT55_RS13090 APT55_RS13115 SM00448 cheY-homologous receiver domain APT55_RS13115 SM00862 Transcriptional regulatory protein, C terminal APT55_RS13120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS13120 SM00387 Histidine kinase-like ATPases APT55_RS13120 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS13200 SM00382 ATPases associated with a variety of cellular activities APT55_RS13220 SM00448 cheY-homologous receiver domain APT55_RS13220 SM00862 Transcriptional regulatory protein, C terminal APT55_RS13270 SM00382 ATPases associated with a variety of cellular activities APT55_RS13440 SM00567 E-Z type HEAT repeats APT55_RS13450 SM01094 CpcD/allophycocyanin linker domain APT55_RS13455 SM01094 CpcD/allophycocyanin linker domain APT55_RS13470 SM00448 cheY-homologous receiver domain APT55_RS13470 SM00862 Transcriptional regulatory protein, C terminal APT55_RS13475 SM00448 cheY-homologous receiver domain APT55_RS13490 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS13500 SM00028 Tetratricopeptide repeats APT55_RS13525 SM00382 ATPases associated with a variety of cellular activities APT55_RS13570 SM00448 cheY-homologous receiver domain APT55_RS13580 SM00028 Tetratricopeptide repeats APT55_RS13595 SM00257 Lysin motif APT55_RS13695 SM00028 Tetratricopeptide repeats APT55_RS13900 SM00255 Toll - interleukin 1 - resistance APT55_RS13945 SM00382 ATPases associated with a variety of cellular activities APT55_RS13975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS13975 SM00387 Histidine kinase-like ATPases APT55_RS13975 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS13980 SM00448 cheY-homologous receiver domain APT55_RS13980 SM00862 Transcriptional regulatory protein, C terminal APT55_RS13990 SM00487 DEAD-like helicases superfamily APT55_RS13990 SM00490 helicase superfamily c-terminal domain APT55_RS14080 SM00448 cheY-homologous receiver domain APT55_RS14085 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS14085 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS14085 SM00091 PAS domain APT55_RS14085 SM00387 Histidine kinase-like ATPases APT55_RS14085 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS14085 SM00448 cheY-homologous receiver domain APT55_RS14090 SM00267 diguanylate cyclase APT55_RS14090 SM00448 cheY-homologous receiver domain APT55_RS14090 SM00862 Transcriptional regulatory protein, C terminal APT55_RS14100 SM00116 Domain in cystathionine beta-synthase and other proteins. APT55_RS14130 SM00155 Phospholipase D. Active site motifs. APT55_RS14160 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. APT55_RS14180 SM00387 Histidine kinase-like ATPases APT55_RS14180 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS14185 SM00448 cheY-homologous receiver domain APT55_RS14185 SM00862 Transcriptional regulatory protein, C terminal APT55_RS14230 SM01021 Bacteriorhodopsin-like protein APT55_RS14240 SM00116 Domain in cystathionine beta-synthase and other proteins. APT55_RS14240 SM00924 MgtE intracellular N domain APT55_RS14260 SM00387 Histidine kinase-like ATPases APT55_RS14260 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS14265 SM00448 cheY-homologous receiver domain APT55_RS14265 SM00862 Transcriptional regulatory protein, C terminal APT55_RS14270 SM00448 cheY-homologous receiver domain APT55_RS14275 SM00831 Cation transporter/ATPase, N-terminus APT55_RS14290 SM00450 Rhodanese Homology Domain APT55_RS14295 SM00849 Metallo-beta-lactamase superfamily APT55_RS14305 SM00450 Rhodanese Homology Domain APT55_RS14310 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APT55_RS14325 SM00345 helix_turn_helix gluconate operon transcriptional repressor APT55_RS14325 SM00895 APT55_RS14325 APT55_RS14335 SM00382 ATPases associated with a variety of cellular activities APT55_RS14385 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS14385 SM00091 PAS domain APT55_RS14385 SM00387 Histidine kinase-like ATPases APT55_RS14385 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS14385 SM00448 cheY-homologous receiver domain APT55_RS14390 SM00448 cheY-homologous receiver domain APT55_RS14395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS14395 SM00387 Histidine kinase-like ATPases APT55_RS14395 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS14400 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS14400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS14400 SM00387 Histidine kinase-like ATPases APT55_RS14400 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS14400 SM00448 cheY-homologous receiver domain APT55_RS14445 SM00460 Transglutaminase/protease-like homologues APT55_RS14455 SM00382 ATPases associated with a variety of cellular activities APT55_RS14455 SM00962 SRP54-type protein, GTPase domain APT55_RS14455 SM00963 SRP54-type protein, helical bundle domain APT55_RS14535 SM00382 ATPases associated with a variety of cellular activities APT55_RS14540 SM00912 haemagglutination activity domain APT55_RS14570 SM00507 HNH nucleases APT55_RS14705 SM00382 ATPases associated with a variety of cellular activities APT55_RS14730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS14730 SM00387 Histidine kinase-like ATPases APT55_RS14730 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS14775 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase APT55_RS14795 SM01240 APT55_RS14795 APT55_RS14855 SM00255 Toll - interleukin 1 - resistance APT55_RS14890 SM00240 Forkhead associated domain APT55_RS14935 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. APT55_RS14945 SM00563 Phosphate acyltransferases APT55_RS14950 SM00387 Histidine kinase-like ATPases APT55_RS14950 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS14950 SM00448 cheY-homologous receiver domain APT55_RS14955 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS15040 SM01321 APT55_RS15040 APT55_RS15055 SM01133 APT55_RS15055 APT55_RS15090 SM00382 ATPases associated with a variety of cellular activities APT55_RS15095 SM00448 cheY-homologous receiver domain APT55_RS15110 SM00028 Tetratricopeptide repeats APT55_RS15140 SM00434 DNA Topoisomerase IV APT55_RS15200 SM00836 DALR anticodon binding domain APT55_RS15200 SM01016 Arginyl tRNA synthetase N terminal dom APT55_RS15220 SM00382 ATPases associated with a variety of cellular activities APT55_RS15235 SM00853 MutL C terminal dimerisation domain APT55_RS15235 SM01340 APT55_RS15235 APT55_RS15260 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS15290 SM00487 DEAD-like helicases superfamily APT55_RS15290 SM00490 helicase superfamily c-terminal domain APT55_RS15330 SM00382 ATPases associated with a variety of cellular activities APT55_RS15340 SM00382 ATPases associated with a variety of cellular activities APT55_RS15425 SM00382 ATPases associated with a variety of cellular activities APT55_RS15445 SM00255 Toll - interleukin 1 - resistance APT55_RS15485 SM00248 ankyrin repeats APT55_RS15505 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS15505 SM00387 Histidine kinase-like ATPases APT55_RS15505 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS15515 SM00838 Elongation factor G C-terminus APT55_RS15525 SM00984 UDP binding domain APT55_RS15530 SM00563 Phosphate acyltransferases APT55_RS15540 SM00257 Lysin motif APT55_RS15555 SM01011 Aminopeptidase P, N-terminal domain APT55_RS15595 SM00872 Alpha mannosidase, middle domain APT55_RS15625 SM00646 APT55_RS15625 APT55_RS15665 SM00421 helix_turn_helix, Lux Regulon APT55_RS15665 SM00448 cheY-homologous receiver domain APT55_RS15670 SM00387 Histidine kinase-like ATPases APT55_RS15680 SM00387 Histidine kinase-like ATPases APT55_RS15700 SM00155 Phospholipase D. Active site motifs. APT55_RS15750 SM00387 Histidine kinase-like ATPases APT55_RS15750 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS15750 SM01080 APT55_RS15750 APT55_RS15760 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain APT55_RS15760 SM00437 Bacterial DNA topoisomerase I DNA-binding domain APT55_RS15760 SM00493 APT55_RS15760 APT55_RS15800 SM00091 PAS domain APT55_RS15820 SM00052 Putative diguanylate phosphodiesterase APT55_RS15820 SM00267 diguanylate cyclase APT55_RS15830 SM00448 cheY-homologous receiver domain APT55_RS15990 SM00943 Bifunctional DNA primase/polymerase, N-terminal APT55_RS16015 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS16015 SM00240 Forkhead associated domain APT55_RS16025 SM01321 APT55_RS16025 APT55_RS16060 SM00382 ATPases associated with a variety of cellular activities APT55_RS16090 SM00382 ATPases associated with a variety of cellular activities APT55_RS16130 SM00382 ATPases associated with a variety of cellular activities APT55_RS16140 SM00448 cheY-homologous receiver domain APT55_RS16140 SM00862 Transcriptional regulatory protein, C terminal APT55_RS16160 SM00046 Diacylglycerol kinase catalytic domain (presumed) APT55_RS16190 SM00852 Probable molybdopterin binding domain APT55_RS16230 SM00567 E-Z type HEAT repeats APT55_RS16360 SM00028 Tetratricopeptide repeats APT55_RS16365 SM00271 DnaJ molecular chaperone homology domain APT55_RS16400 SM00448 cheY-homologous receiver domain APT55_RS16400 SM00862 Transcriptional regulatory protein, C terminal APT55_RS16415 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APT55_RS16465 SM00387 Histidine kinase-like ATPases APT55_RS16465 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS16465 SM01248 APT55_RS16465 APT55_RS16485 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS16485 SM00387 Histidine kinase-like ATPases APT55_RS16485 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS16520 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS16545 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS16555 SM00316 Ribosomal protein S1-like RNA-binding domain APT55_RS16575 SM00464 Found in ATP-dependent protease La (LON) APT55_RS16580 SM01403 APT55_RS16580 APT55_RS16600 SM00838 Elongation factor G C-terminus APT55_RS16600 SM00889 Elongation factor G, domain IV APT55_RS16655 SM00849 Metallo-beta-lactamase superfamily APT55_RS16660 SM01130 APT55_RS16660 APT55_RS16665 SM00859 Semialdehyde dehydrogenase, NAD binding domain APT55_RS16680 SM00382 ATPases associated with a variety of cellular activities APT55_RS16680 SM00994 ClpX C4-type zinc finger APT55_RS16680 SM01086 C-terminal, D2-small domain, of ClpB protein APT55_RS16690 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS16695 SM00421 helix_turn_helix, Lux Regulon APT55_RS16710 SM00255 Toll - interleukin 1 - resistance APT55_RS16715 SM00255 Toll - interleukin 1 - resistance APT55_RS16725 SM00830 Chorismate mutase type II APT55_RS16775 SM00287 Bacterial SH3 domain homologues APT55_RS16780 SM00998 Adenylosuccinate lyase C-terminus APT55_RS16800 SM00240 Forkhead associated domain APT55_RS16830 SM00880 APT55_RS16830 APT55_RS16850 SM00382 ATPases associated with a variety of cellular activities APT55_RS16890 SM00271 DnaJ molecular chaperone homology domain APT55_RS16965 SM00448 cheY-homologous receiver domain APT55_RS16970 SM00448 cheY-homologous receiver domain APT55_RS16975 SM00260 Two component signalling adaptor domain APT55_RS16980 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS16980 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APT55_RS16985 SM00073 Histidine Phosphotransfer domain APT55_RS16985 SM00260 Two component signalling adaptor domain APT55_RS16985 SM00387 Histidine kinase-like ATPases APT55_RS16985 SM00448 cheY-homologous receiver domain APT55_RS16990 SM00260 Two component signalling adaptor domain APT55_RS17030 SM01248 APT55_RS17030 APT55_RS17055 SM00448 cheY-homologous receiver domain APT55_RS17095 SM00316 Ribosomal protein S1-like RNA-binding domain APT55_RS17095 SM00357 Cold shock protein domain APT55_RS17095 SM00955 APT55_RS17095 APT55_RS17110 SM00938 Nitrogen regulatory protein P-II APT55_RS17135 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS17140 SM00710 Parallel beta-helix repeats APT55_RS17185 SM00852 Probable molybdopterin binding domain APT55_RS17190 SM00363 S4 RNA-binding domain APT55_RS17190 SM01390 APT55_RS17190 APT55_RS17195 SM00448 cheY-homologous receiver domain APT55_RS17210 SM00448 cheY-homologous receiver domain APT55_RS17210 SM00862 Transcriptional regulatory protein, C terminal APT55_RS17215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS17215 SM00387 Histidine kinase-like ATPases APT55_RS17215 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS17255 SM00267 diguanylate cyclase APT55_RS17255 SM00448 cheY-homologous receiver domain APT55_RS17255 SM00862 Transcriptional regulatory protein, C terminal APT55_RS17265 SM00533 DNA-binding domain of DNA mismatch repair MUTS family APT55_RS17265 SM00534 ATPase domain of DNA mismatch repair MUTS family APT55_RS17270 SM00052 Putative diguanylate phosphodiesterase APT55_RS17270 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS17270 SM00091 PAS domain APT55_RS17270 SM00267 diguanylate cyclase APT55_RS17280 SM00363 S4 RNA-binding domain APT55_RS17305 SM00861 Transketolase, pyrimidine binding domain APT55_RS17330 SM00028 Tetratricopeptide repeats APT55_RS17380 SM00450 Rhodanese Homology Domain APT55_RS17395 SM00028 Tetratricopeptide repeats APT55_RS17400 SM00062 Bacterial periplasmic substrate-binding proteins APT55_RS17425 SM00322 K homology RNA-binding domain APT55_RS17465 SM00028 Tetratricopeptide repeats APT55_RS17495 SM00649 Ribosomal protein L11/L12 APT55_RS17500 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. APT55_RS17500 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APT55_RS17535 SM00382 ATPases associated with a variety of cellular activities APT55_RS17565 SM00382 ATPases associated with a variety of cellular activities APT55_RS17595 SM00845 GatB domain APT55_RS17600 SM00331 Sigma factor PP2C-like phosphatases APT55_RS17600 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain APT55_RS17615 SM00917 LeuA allosteric (dimerisation) domain APT55_RS17680 SM00382 ATPases associated with a variety of cellular activities APT55_RS17725 SM00382 ATPases associated with a variety of cellular activities APT55_RS17730 SM00382 ATPases associated with a variety of cellular activities APT55_RS17770 SM00387 Histidine kinase-like ATPases APT55_RS17770 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS17850 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS17905 SM00829 Enoylreductase APT55_RS17910 SM00477 DNA/RNA non-specific endonuclease APT55_RS17910 SM00892 DNA/RNA non-specific endonuclease APT55_RS17920 SM00344 helix_turn_helix ASNC type APT55_RS17925 SM00062 Bacterial periplasmic substrate-binding proteins APT55_RS17940 SM00387 Histidine kinase-like ATPases APT55_RS17940 SM00433 TopoisomeraseII APT55_RS17965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS17975 SM00382 ATPases associated with a variety of cellular activities APT55_RS18015 SM00382 ATPases associated with a variety of cellular activities APT55_RS18040 SM00028 Tetratricopeptide repeats APT55_RS18075 SM00421 helix_turn_helix, Lux Regulon APT55_RS18075 SM00448 cheY-homologous receiver domain APT55_RS18080 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APT55_RS18085 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT55_RS18085 SM00245 tail specific protease APT55_RS18165 SM00320 WD40 repeats APT55_RS18195 SM00382 ATPases associated with a variety of cellular activities APT55_RS18210 SM00849 Metallo-beta-lactamase superfamily APT55_RS18225 SM00116 Domain in cystathionine beta-synthase and other proteins. APT55_RS18225 SM00924 MgtE intracellular N domain APT55_RS18255 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS18255 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APT55_RS18255 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS18370 SM00961 Ribulose bisphosphate carboxylase, small chain APT55_RS18395 SM00382 ATPases associated with a variety of cellular activities APT55_RS18430 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. APT55_RS18480 SM00052 Putative diguanylate phosphodiesterase APT55_RS18495 SM00382 ATPases associated with a variety of cellular activities APT55_RS18545 SM00382 ATPases associated with a variety of cellular activities APT55_RS18560 SM00930 APT55_RS18560 APT55_RS18675 SM01230 APT55_RS18675 APT55_RS18680 SM00849 Metallo-beta-lactamase superfamily APT55_RS18720 SM00028 Tetratricopeptide repeats APT55_RS18750 SM00382 ATPases associated with a variety of cellular activities APT55_RS18770 SM00382 ATPases associated with a variety of cellular activities APT55_RS18795 SM00382 ATPases associated with a variety of cellular activities APT55_RS18805 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS18810 SM00829 Enoylreductase APT55_RS18855 SM00387 Histidine kinase-like ATPases APT55_RS18855 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS18875 SM00421 helix_turn_helix, Lux Regulon APT55_RS18875 SM00448 cheY-homologous receiver domain APT55_RS18900 SM01091 Transporter associated domain APT55_RS18910 SM00841 Elongation factor P, C-terminal APT55_RS18910 SM01185 APT55_RS18910 APT55_RS18940 SM00320 WD40 repeats APT55_RS18955 SM00798 AICARFT/IMPCHase bienzyme APT55_RS18955 SM00851 MGS-like domain APT55_RS18980 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS18980 SM00091 PAS domain APT55_RS18980 SM00387 Histidine kinase-like ATPases APT55_RS18980 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS18980 SM00448 cheY-homologous receiver domain APT55_RS18995 SM00244 prohibitin homologues APT55_RS19030 SM00421 helix_turn_helix, Lux Regulon APT55_RS19030 SM00448 cheY-homologous receiver domain APT55_RS19050 SM00387 Histidine kinase-like ATPases APT55_RS19050 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS19075 SM00852 Probable molybdopterin binding domain APT55_RS19080 SM00864 Tubulin/FtsZ family, GTPase domain APT55_RS19080 SM00865 Tubulin/FtsZ family, C-terminal domain APT55_RS19105 SM00028 Tetratricopeptide repeats APT55_RS19135 SM00644 APT55_RS19135 APT55_RS19145 SM00028 Tetratricopeptide repeats APT55_RS19155 SM00382 ATPases associated with a variety of cellular activities APT55_RS19175 SM00481 DNA polymerase alpha chain like domain APT55_RS19205 SM00382 ATPases associated with a variety of cellular activities APT55_RS19220 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS19220 SM00387 Histidine kinase-like ATPases APT55_RS19230 SM00829 Enoylreductase APT55_RS19240 SM00028 Tetratricopeptide repeats APT55_RS19300 SM00421 helix_turn_helix, Lux Regulon APT55_RS19300 SM00448 cheY-homologous receiver domain APT55_RS19365 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS19365 SM00387 Histidine kinase-like ATPases APT55_RS19365 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS19370 SM00387 Histidine kinase-like ATPases APT55_RS19370 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS19380 SM00387 Histidine kinase-like ATPases APT55_RS19380 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS19500 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS19585 SM00912 haemagglutination activity domain APT55_RS19925 SM00487 DEAD-like helicases superfamily APT55_RS19925 SM00490 helicase superfamily c-terminal domain APT55_RS19980 SM00829 Enoylreductase APT55_RS20060 SM00028 Tetratricopeptide repeats APT55_RS20090 SM00116 Domain in cystathionine beta-synthase and other proteins. APT55_RS20090 SM01091 Transporter associated domain APT55_RS20095 SM00487 DEAD-like helicases superfamily APT55_RS20095 SM00490 helicase superfamily c-terminal domain APT55_RS20095 SM00982 APT55_RS20095 APT55_RS20095 SM01058 CarD-like/TRCF domain APT55_RS20180 SM00387 Histidine kinase-like ATPases APT55_RS20180 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS20185 SM00822 APT55_RS20185 APT55_RS20195 SM00881 CoA binding domain APT55_RS20265 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS20280 SM00829 Enoylreductase APT55_RS20295 SM00382 ATPases associated with a variety of cellular activities APT55_RS20340 SM00822 APT55_RS20340 APT55_RS20360 SM00382 ATPases associated with a variety of cellular activities APT55_RS20480 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS20485 SM00387 Histidine kinase-like ATPases APT55_RS20485 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS20495 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS20505 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS20505 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS20505 SM00091 PAS domain APT55_RS20505 SM00387 Histidine kinase-like ATPases APT55_RS20505 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS20505 SM00448 cheY-homologous receiver domain APT55_RS20510 SM00421 helix_turn_helix, Lux Regulon APT55_RS20510 SM00448 cheY-homologous receiver domain APT55_RS20575 SM01094 CpcD/allophycocyanin linker domain APT55_RS20625 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS20625 SM00331 Sigma factor PP2C-like phosphatases APT55_RS20625 SM00448 cheY-homologous receiver domain APT55_RS20635 SM00563 Phosphate acyltransferases APT55_RS20640 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. APT55_RS20660 SM00240 Forkhead associated domain APT55_RS20680 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain APT55_RS20680 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS20680 SM00091 PAS domain APT55_RS20685 SM00357 Cold shock protein domain APT55_RS20690 SM00877 APT55_RS20690 APT55_RS20700 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. APT55_RS20750 SM00567 E-Z type HEAT repeats APT55_RS20865 SM01230 APT55_RS20865 APT55_RS20900 SM00028 Tetratricopeptide repeats APT55_RS20910 SM00382 ATPases associated with a variety of cellular activities APT55_RS20955 SM00219 Tyrosine kinase, catalytic domain APT55_RS20960 SM00897 FIST N domain APT55_RS20960 SM01204 APT55_RS20960 APT55_RS20965 SM00387 Histidine kinase-like ATPases APT55_RS20980 SM00255 Toll - interleukin 1 - resistance APT55_RS20985 SM00465 GIY-YIG type nucleases (URI domain) APT55_RS21055 SM00028 Tetratricopeptide repeats APT55_RS21095 SM00382 ATPases associated with a variety of cellular activities APT55_RS21105 SM00966 SpoVT / AbrB like domain APT55_RS21120 SM00240 Forkhead associated domain APT55_RS21120 SM00382 ATPases associated with a variety of cellular activities APT55_RS21190 SM00387 Histidine kinase-like ATPases APT55_RS21190 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS21215 SM00448 cheY-homologous receiver domain APT55_RS21215 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APT55_RS21240 SM00833 Cobalamin synthesis protein cobW C-terminal domain APT55_RS21285 SM00411 bacterial (prokaryotic) histone like domain APT55_RS21340 SM00331 Sigma factor PP2C-like phosphatases APT55_RS21340 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain APT55_RS21390 SM00470 ParB-like nuclease domain APT55_RS21455 SM01400 APT55_RS21455 APT55_RS21465 SM00382 ATPases associated with a variety of cellular activities APT55_RS21465 SM01086 C-terminal, D2-small domain, of ClpB protein APT55_RS21480 SM00116 Domain in cystathionine beta-synthase and other proteins. APT55_RS21490 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT55_RS21500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APT55_RS21520 SM00710 Parallel beta-helix repeats APT55_RS21560 SM00382 ATPases associated with a variety of cellular activities APT55_RS21600 SM00305 Hint (Hedgehog/Intein) domain C-terminal region APT55_RS21600 SM00306 Hint (Hedgehog/Intein) domain N-terminal region APT55_RS21620 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain APT55_RS21625 SM01092 CO dehydrogenase flavoprotein C-terminal domain APT55_RS21700 SM00173 Ras subfamily of RAS small GTPases APT55_RS21705 SM01192 APT55_RS21705 APT55_RS21705 SM01193 APT55_RS21705 APT55_RS21730 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS21745 SM00278 Helix-hairpin-helix DNA-binding motif class 1 APT55_RS21790 SM00507 HNH nucleases APT55_RS21800 SM00904 Riboflavin kinase APT55_RS21850 SM00989 APT55_RS21850 APT55_RS21865 SM00989 APT55_RS21865 APT55_RS21870 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS21915 SM00448 cheY-homologous receiver domain APT55_RS21915 SM00862 Transcriptional regulatory protein, C terminal APT55_RS21920 SM00387 Histidine kinase-like ATPases APT55_RS21920 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS22025 SM00883 Chaperonin 10 Kd subunit APT55_RS22050 SM01094 CpcD/allophycocyanin linker domain APT55_RS22055 SM01094 CpcD/allophycocyanin linker domain APT55_RS22085 SM00327 von Willebrand factor (vWF) type A domain APT55_RS22125 SM00255 Toll - interleukin 1 - resistance APT55_RS22125 SM00320 WD40 repeats APT55_RS22145 SM00345 helix_turn_helix gluconate operon transcriptional repressor APT55_RS22145 SM00895 APT55_RS22145 APT55_RS22155 SM00382 ATPases associated with a variety of cellular activities APT55_RS22190 SM00448 cheY-homologous receiver domain APT55_RS22195 SM00091 PAS domain APT55_RS22195 SM00387 Histidine kinase-like ATPases APT55_RS22195 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS22195 SM00448 cheY-homologous receiver domain APT55_RS22215 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS22215 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS22215 SM00091 PAS domain APT55_RS22215 SM00387 Histidine kinase-like ATPases APT55_RS22215 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS22215 SM00448 cheY-homologous receiver domain APT55_RS22220 SM00448 cheY-homologous receiver domain APT55_RS22220 SM00862 Transcriptional regulatory protein, C terminal APT55_RS22305 SM01094 CpcD/allophycocyanin linker domain APT55_RS22345 SM01234 APT55_RS22345 APT55_RS22385 SM00287 Bacterial SH3 domain homologues APT55_RS22390 SM00448 cheY-homologous receiver domain APT55_RS22395 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain APT55_RS22395 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS22400 SM00091 PAS domain APT55_RS22400 SM00387 Histidine kinase-like ATPases APT55_RS22400 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS22400 SM00448 cheY-homologous receiver domain APT55_RS22450 SM00400 zinc finger APT55_RS22450 SM00493 APT55_RS22450 APT55_RS22500 SM00507 HNH nucleases APT55_RS22510 SM00855 Phosphoglycerate mutase family APT55_RS22525 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS22540 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain APT55_RS22540 SM00240 Forkhead associated domain APT55_RS22575 SM00861 Transketolase, pyrimidine binding domain APT55_RS22585 SM00825 Beta-ketoacyl synthase APT55_RS22590 SM00823 Phosphopantetheine attachment site APT55_RS22600 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS22625 SM00838 Elongation factor G C-terminus APT55_RS22625 SM00889 Elongation factor G, domain IV APT55_RS22635 SM00327 von Willebrand factor (vWF) type A domain APT55_RS22715 SM00448 cheY-homologous receiver domain APT55_RS22755 SM00382 ATPases associated with a variety of cellular activities APT55_RS22765 SM00988 UreE urease accessory protein, N-terminal domain APT55_RS22775 SM00358 Double-stranded RNA binding motif APT55_RS22775 SM00535 Ribonuclease III family APT55_RS22875 SM00642 Alpha-amylase domain APT55_RS22880 SM01387 APT55_RS22880 APT55_RS22905 SM00421 helix_turn_helix, Lux Regulon APT55_RS22915 SM00382 ATPases associated with a variety of cellular activities APT55_RS22920 SM00382 ATPases associated with a variety of cellular activities APT55_RS22940 SM00244 prohibitin homologues APT55_RS22960 SM00382 ATPases associated with a variety of cellular activities APT55_RS22970 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS22970 SM00091 PAS domain APT55_RS22970 SM00387 Histidine kinase-like ATPases APT55_RS22970 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS22970 SM00448 cheY-homologous receiver domain APT55_RS23000 SM00984 UDP binding domain APT55_RS23105 SM01091 Transporter associated domain APT55_RS23145 SM00567 E-Z type HEAT repeats APT55_RS23150 SM00487 DEAD-like helicases superfamily APT55_RS23150 SM00490 helicase superfamily c-terminal domain APT55_RS23175 SM00829 Enoylreductase APT55_RS23190 SM00947 Carbonic anhydrase APT55_RS23195 SM00981 APT55_RS23195 APT55_RS23360 SM00831 Cation transporter/ATPase, N-terminus APT55_RS23370 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS23380 SM00028 Tetratricopeptide repeats APT55_RS23430 SM00448 cheY-homologous receiver domain APT55_RS23430 SM00862 Transcriptional regulatory protein, C terminal APT55_RS23435 SM00387 Histidine kinase-like ATPases APT55_RS23435 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS23475 SM00028 Tetratricopeptide repeats APT55_RS23495 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS23495 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS23505 SM00421 helix_turn_helix, Lux Regulon APT55_RS23505 SM00448 cheY-homologous receiver domain APT55_RS23510 SM01329 APT55_RS23510 APT55_RS23520 SM00448 cheY-homologous receiver domain APT55_RS23525 SM00448 cheY-homologous receiver domain APT55_RS23525 SM00862 Transcriptional regulatory protein, C terminal APT55_RS23535 SM00382 ATPases associated with a variety of cellular activities APT55_RS23545 SM00116 Domain in cystathionine beta-synthase and other proteins. APT55_RS23550 SM00567 E-Z type HEAT repeats APT55_RS23565 SM00854 Bacterial capsule synthesis protein PGA_cap APT55_RS23585 SM00028 Tetratricopeptide repeats APT55_RS23585 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS23630 SM01001 AIR carboxylase APT55_RS23640 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain APT55_RS23665 SM00240 Forkhead associated domain APT55_RS23675 SM00968 SMC proteins Flexible Hinge Domain APT55_RS23710 SM00732 Likely ribonuclease with RNase H fold. APT55_RS23715 SM00387 Histidine kinase-like ATPases APT55_RS23715 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS23740 SM00479 APT55_RS23740 APT55_RS23745 SM00487 DEAD-like helicases superfamily APT55_RS23745 SM00490 helicase superfamily c-terminal domain APT55_RS23750 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS23800 SM00363 S4 RNA-binding domain APT55_RS23805 SM00244 prohibitin homologues APT55_RS23815 SM00382 ATPases associated with a variety of cellular activities APT55_RS23855 SM01007 Class II Aldolase and Adducin N-terminal domain APT55_RS23895 SM00642 Alpha-amylase domain APT55_RS23995 SM00382 ATPases associated with a variety of cellular activities APT55_RS24050 SM00382 ATPases associated with a variety of cellular activities APT55_RS24115 SM00650 Ribosomal RNA adenine dimethylases APT55_RS24180 SM00861 Transketolase, pyrimidine binding domain APT55_RS24200 SM00387 Histidine kinase-like ATPases APT55_RS24200 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS24210 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. APT55_RS24215 SM00419 helix_turn_helix, cAMP Regulatory protein APT55_RS24250 SM00091 PAS domain APT55_RS24250 SM00419 helix_turn_helix, cAMP Regulatory protein APT55_RS24265 SM00930 APT55_RS24265 APT55_RS24275 SM00331 Sigma factor PP2C-like phosphatases APT55_RS24275 SM00448 cheY-homologous receiver domain APT55_RS24305 SM00287 Bacterial SH3 domain homologues APT55_RS24305 SM00646 APT55_RS24305 APT55_RS24360 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS24365 SM00028 Tetratricopeptide repeats APT55_RS24365 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS24410 SM00382 ATPases associated with a variety of cellular activities APT55_RS24420 SM00382 ATPases associated with a variety of cellular activities APT55_RS24425 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS24425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS24425 SM00387 Histidine kinase-like ATPases APT55_RS24425 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS24425 SM00448 cheY-homologous receiver domain APT55_RS24430 SM00912 haemagglutination activity domain APT55_RS24445 SM00387 Histidine kinase-like ATPases APT55_RS24445 SM00448 cheY-homologous receiver domain APT55_RS24450 SM00387 Histidine kinase-like ATPases APT55_RS24450 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS24450 SM00448 cheY-homologous receiver domain APT55_RS24485 SM00448 cheY-homologous receiver domain APT55_RS24520 SM00028 Tetratricopeptide repeats APT55_RS24545 SM01350 APT55_RS24545 APT55_RS24555 SM00855 Phosphoglycerate mutase family APT55_RS24570 SM00567 E-Z type HEAT repeats APT55_RS24595 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS24650 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS24650 SM00421 helix_turn_helix, Lux Regulon APT55_RS24680 SM00917 LeuA allosteric (dimerisation) domain APT55_RS24690 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS24690 SM01080 APT55_RS24690 APT55_RS24720 SM01382 APT55_RS24720 APT55_RS24720 SM01383 APT55_RS24720 APT55_RS24735 SM00322 K homology RNA-binding domain APT55_RS24755 SM01374 APT55_RS24755 APT55_RS24760 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. APT55_RS24840 SM00507 HNH nucleases APT55_RS24865 SM00382 ATPases associated with a variety of cellular activities APT55_RS24865 SM00567 E-Z type HEAT repeats APT55_RS24885 SM00028 Tetratricopeptide repeats APT55_RS24900 SM00287 Bacterial SH3 domain homologues APT55_RS24910 SM00028 Tetratricopeptide repeats APT55_RS24975 SM01080 APT55_RS24975 APT55_RS24985 SM00829 Enoylreductase APT55_RS25005 SM00382 ATPases associated with a variety of cellular activities APT55_RS25025 SM00419 helix_turn_helix, cAMP Regulatory protein APT55_RS25055 SM00342 helix_turn_helix, arabinose operon control protein APT55_RS25065 SM00382 ATPases associated with a variety of cellular activities APT55_RS25070 SM00382 ATPases associated with a variety of cellular activities APT55_RS25075 SM00342 helix_turn_helix, arabinose operon control protein APT55_RS25105 SM00342 helix_turn_helix, arabinose operon control protein APT55_RS25110 SM00382 ATPases associated with a variety of cellular activities APT55_RS25185 SM00320 WD40 repeats APT55_RS25295 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs APT55_RS25295 SM00474 3'-5' exonuclease APT55_RS25295 SM00475 5'-3' exonuclease APT55_RS25295 SM00482 DNA polymerase A domain APT55_RS25305 SM00448 cheY-homologous receiver domain APT55_RS25310 SM00448 cheY-homologous receiver domain APT55_RS25315 SM00260 Two component signalling adaptor domain APT55_RS25320 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS25320 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). APT55_RS25320 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS25325 SM00073 Histidine Phosphotransfer domain APT55_RS25325 SM00260 Two component signalling adaptor domain APT55_RS25325 SM00387 Histidine kinase-like ATPases APT55_RS25325 SM00448 cheY-homologous receiver domain APT55_RS25325 SM01231 APT55_RS25325 APT55_RS25365 SM01091 Transporter associated domain APT55_RS25405 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS25425 SM00382 ATPases associated with a variety of cellular activities APT55_RS25450 SM00567 E-Z type HEAT repeats APT55_RS25470 SM00387 Histidine kinase-like ATPases APT55_RS25550 SM00474 3'-5' exonuclease APT55_RS25570 SM00382 ATPases associated with a variety of cellular activities APT55_RS25595 SM00460 Transglutaminase/protease-like homologues APT55_RS25640 SM00237 Domains in Na-Ca exchangers and integrin-beta4 APT55_RS25640 SM00758 APT55_RS25640 APT55_RS25645 SM00463 Small MutS-related domain APT55_RS25645 SM00533 DNA-binding domain of DNA mismatch repair MUTS family APT55_RS25645 SM00534 ATPase domain of DNA mismatch repair MUTS family APT55_RS25650 SM00387 Histidine kinase-like ATPases APT55_RS25650 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS25650 SM00448 cheY-homologous receiver domain APT55_RS25655 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain APT55_RS25655 SM00387 Histidine kinase-like ATPases APT55_RS25660 SM00642 Alpha-amylase domain APT55_RS25665 SM00642 Alpha-amylase domain APT55_RS25675 SM01329 APT55_RS25675 APT55_RS25715 SM00382 ATPases associated with a variety of cellular activities APT55_RS25720 SM00478 endonuclease III APT55_RS25720 SM00525 APT55_RS25720 APT55_RS25740 SM00823 Phosphopantetheine attachment site APT55_RS25750 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS25840 SM00487 DEAD-like helicases superfamily APT55_RS25840 SM00490 helicase superfamily c-terminal domain APT55_RS25855 SM00382 ATPases associated with a variety of cellular activities APT55_RS25875 SM00478 endonuclease III APT55_RS25980 SM00360 RNA recognition motif APT55_RS26040 SM00240 Forkhead associated domain APT55_RS26100 SM00347 helix_turn_helix multiple antibiotic resistance protein APT55_RS26155 SM00419 helix_turn_helix, cAMP Regulatory protein APT55_RS26160 SM00271 DnaJ molecular chaperone homology domain APT55_RS26175 SM00849 Metallo-beta-lactamase superfamily APT55_RS26175 SM00903 Flavin reductase like domain APT55_RS26180 SM00849 Metallo-beta-lactamase superfamily APT55_RS26180 SM00903 Flavin reductase like domain APT55_RS26235 SM00360 RNA recognition motif APT55_RS26255 SM00487 DEAD-like helicases superfamily APT55_RS26255 SM00490 helicase superfamily c-terminal domain APT55_RS26325 SM00072 Guanylate kinase homologues. APT55_RS26350 SM00966 SpoVT / AbrB like domain APT55_RS26360 SM00255 Toll - interleukin 1 - resistance APT55_RS26375 SM00996 S-adenosyl-L-homocysteine hydrolase APT55_RS26375 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain APT55_RS26405 SM00421 helix_turn_helix, Lux Regulon APT55_RS26405 SM00448 cheY-homologous receiver domain APT55_RS26515 SM00073 Histidine Phosphotransfer domain APT55_RS26565 SM00909 Sporulation and spore germination APT55_RS26570 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor APT55_RS26595 SM00028 Tetratricopeptide repeats APT55_RS26600 SM00028 Tetratricopeptide repeats APT55_RS26620 SM00912 haemagglutination activity domain APT55_RS26625 SM00912 haemagglutination activity domain APT55_RS26630 SM00912 haemagglutination activity domain APT55_RS26640 SM00912 haemagglutination activity domain APT55_RS26650 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS26655 SM00670 Large family of predicted nucleotide-binding domains APT55_RS26670 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS26675 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. APT55_RS26715 SM00909 Sporulation and spore germination APT55_RS26720 SM00267 diguanylate cyclase APT55_RS26720 SM00448 cheY-homologous receiver domain APT55_RS26720 SM00862 Transcriptional regulatory protein, C terminal APT55_RS26740 SM00363 S4 RNA-binding domain APT55_RS26810 SM00382 ATPases associated with a variety of cellular activities APT55_RS26820 SM00849 Metallo-beta-lactamase superfamily APT55_RS26825 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS26825 SM00091 PAS domain APT55_RS26825 SM00387 Histidine kinase-like ATPases APT55_RS26835 SM00947 Carbonic anhydrase APT55_RS26900 SM00028 Tetratricopeptide repeats APT55_RS26905 SM00382 ATPases associated with a variety of cellular activities APT55_RS26925 SM00905 Dihydroneopterin aldolase APT55_RS27045 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS27045 SM00091 PAS domain APT55_RS27045 SM00320 WD40 repeats APT55_RS27060 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS27080 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS27080 SM00091 PAS domain APT55_RS27080 SM00387 Histidine kinase-like ATPases APT55_RS27080 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS27085 SM00448 cheY-homologous receiver domain APT55_RS27085 SM00862 Transcriptional regulatory protein, C terminal APT55_RS27090 SM00387 Histidine kinase-like ATPases APT55_RS27090 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS27185 SM00028 Tetratricopeptide repeats APT55_RS27255 SM00271 DnaJ molecular chaperone homology domain APT55_RS27265 SM00448 cheY-homologous receiver domain APT55_RS27265 SM00862 Transcriptional regulatory protein, C terminal APT55_RS27270 SM00387 Histidine kinase-like ATPases APT55_RS27270 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS27275 SM00363 S4 RNA-binding domain APT55_RS27315 SM00851 MGS-like domain APT55_RS27315 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain APT55_RS27335 SM00028 Tetratricopeptide repeats APT55_RS27355 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS27390 SM00710 Parallel beta-helix repeats APT55_RS27470 SM00327 von Willebrand factor (vWF) type A domain APT55_RS27480 SM00327 von Willebrand factor (vWF) type A domain APT55_RS27485 SM00240 Forkhead associated domain APT55_RS27490 SM00331 Sigma factor PP2C-like phosphatases APT55_RS27490 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain APT55_RS27495 SM00028 Tetratricopeptide repeats APT55_RS27495 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS27505 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS27505 SM00331 Sigma factor PP2C-like phosphatases APT55_RS27505 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain APT55_RS27510 SM00327 von Willebrand factor (vWF) type A domain APT55_RS27515 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS27515 SM00320 WD40 repeats APT55_RS27520 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS27520 SM00710 Parallel beta-helix repeats APT55_RS27520 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses APT55_RS27525 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS27525 SM00710 Parallel beta-helix repeats APT55_RS27525 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses APT55_RS27540 SM00028 Tetratricopeptide repeats APT55_RS27610 SM00382 ATPases associated with a variety of cellular activities APT55_RS27640 SM00919 Malic enzyme, NAD binding domain APT55_RS27640 SM01274 APT55_RS27640 APT55_RS27675 SM00642 Alpha-amylase domain APT55_RS27680 SM00014 Acid phosphatase homologues APT55_RS27735 SM00421 helix_turn_helix, Lux Regulon APT55_RS27735 SM00448 cheY-homologous receiver domain APT55_RS27750 SM00382 ATPases associated with a variety of cellular activities APT55_RS27780 SM00116 Domain in cystathionine beta-synthase and other proteins. APT55_RS27805 SM00758 APT55_RS27805 APT55_RS27950 SM00448 cheY-homologous receiver domain APT55_RS28045 SM00387 Histidine kinase-like ATPases APT55_RS28045 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS28055 SM00028 Tetratricopeptide repeats APT55_RS28165 SM00448 cheY-homologous receiver domain APT55_RS28165 SM00862 Transcriptional regulatory protein, C terminal APT55_RS28170 SM00387 Histidine kinase-like ATPases APT55_RS28170 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS28205 SM01133 APT55_RS28205 APT55_RS28220 SM01350 APT55_RS28220 APT55_RS28265 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS28265 SM00387 Histidine kinase-like ATPases APT55_RS28265 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS28290 SM00421 helix_turn_helix, Lux Regulon APT55_RS28290 SM00448 cheY-homologous receiver domain APT55_RS28295 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS28295 SM00387 Histidine kinase-like ATPases APT55_RS28310 SM00448 cheY-homologous receiver domain APT55_RS28355 SM00448 cheY-homologous receiver domain APT55_RS28355 SM00862 Transcriptional regulatory protein, C terminal APT55_RS28360 SM00387 Histidine kinase-like ATPases APT55_RS28360 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS28365 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS28365 SM00419 helix_turn_helix, cAMP Regulatory protein APT55_RS28370 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS28370 SM00387 Histidine kinase-like ATPases APT55_RS28370 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS28380 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins APT55_RS28400 SM00320 WD40 repeats APT55_RS28450 SM00034 C-type lectin (CTL) or carbohydrate-recognition domain (CRD) APT55_RS28520 SM00422 helix_turn_helix, mercury resistance APT55_RS28525 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS28525 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS28525 SM00091 PAS domain APT55_RS28525 SM00387 Histidine kinase-like ATPases APT55_RS28530 SM00421 helix_turn_helix, Lux Regulon APT55_RS28530 SM00448 cheY-homologous receiver domain APT55_RS28640 SM00028 Tetratricopeptide repeats APT55_RS28660 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS28660 SM00387 Histidine kinase-like ATPases APT55_RS28675 SM00382 ATPases associated with a variety of cellular activities APT55_RS28720 SM00420 helix_turn_helix, Deoxyribose operon repressor APT55_RS28820 SM00756 APT55_RS28820 APT55_RS28830 SM01093 APT55_RS28830 APT55_RS28840 SM00897 FIST N domain APT55_RS28840 SM01204 APT55_RS28840 APT55_RS28855 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS28855 SM00387 Histidine kinase-like ATPases APT55_RS28855 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS28860 SM00448 cheY-homologous receiver domain APT55_RS28865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS28865 SM00091 PAS domain APT55_RS28865 SM00387 Histidine kinase-like ATPases APT55_RS28865 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS28865 SM00448 cheY-homologous receiver domain APT55_RS28870 SM00387 Histidine kinase-like ATPases APT55_RS28870 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS28870 SM00448 cheY-homologous receiver domain APT55_RS28880 SM00044 Adenylyl- / guanylyl cyclase, catalytic domain APT55_RS28885 SM00320 WD40 repeats APT55_RS28890 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS28900 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS29010 SM00387 Histidine kinase-like ATPases APT55_RS29010 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS29015 SM00421 helix_turn_helix, Lux Regulon APT55_RS29015 SM00448 cheY-homologous receiver domain APT55_RS29040 SM00387 Histidine kinase-like ATPases APT55_RS29040 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS29045 SM00448 cheY-homologous receiver domain APT55_RS29045 SM00862 Transcriptional regulatory protein, C terminal APT55_RS29055 SM00419 helix_turn_helix, cAMP Regulatory protein APT55_RS29085 SM00237 Domains in Na-Ca exchangers and integrin-beta4 APT55_RS29150 SM00729 Elongator protein 3, MiaB family, Radical SAM APT55_RS29155 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS29155 SM00091 PAS domain APT55_RS29155 SM00387 Histidine kinase-like ATPases APT55_RS29155 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS29175 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS29190 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS29200 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS29225 SM00487 DEAD-like helicases superfamily APT55_RS29225 SM00490 helicase superfamily c-terminal domain APT55_RS29225 SM01142 APT55_RS29225 APT55_RS29320 SM00271 DnaJ molecular chaperone homology domain APT55_RS29345 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS29405 SM00411 bacterial (prokaryotic) histone like domain APT55_RS29840 SM00382 ATPases associated with a variety of cellular activities APT55_RS29865 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS29880 SM00112 Cadherin repeats. APT55_RS29880 SM00736 Dystroglycan-type cadherin-like domains. APT55_RS29945 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS29945 SM00382 ATPases associated with a variety of cellular activities APT55_RS29990 SM00382 ATPases associated with a variety of cellular activities APT55_RS30010 SM00487 DEAD-like helicases superfamily APT55_RS30015 SM00480 DNA polymerase III beta subunit APT55_RS30065 SM01321 APT55_RS30065 APT55_RS30075 SM00506 Appr-1"-p processing enzyme APT55_RS30100 SM00382 ATPases associated with a variety of cellular activities APT55_RS30110 SM00773 Proposed nucleic acid binding domain APT55_RS30115 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS30120 SM00487 DEAD-like helicases superfamily APT55_RS30120 SM00490 helicase superfamily c-terminal domain APT55_RS30140 SM00382 ATPases associated with a variety of cellular activities APT55_RS30210 SM00347 helix_turn_helix multiple antibiotic resistance protein APT55_RS30285 SM00342 helix_turn_helix, arabinose operon control protein APT55_RS30315 SM00342 helix_turn_helix, arabinose operon control protein APT55_RS30485 SM00382 ATPases associated with a variety of cellular activities APT55_RS30535 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS30535 SM00382 ATPases associated with a variety of cellular activities APT55_RS30550 SM00240 Forkhead associated domain APT55_RS30560 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS30560 SM00320 WD40 repeats APT55_RS30620 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS30620 SM00091 PAS domain APT55_RS30630 SM00912 haemagglutination activity domain APT55_RS30650 SM00028 Tetratricopeptide repeats APT55_RS30650 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS30705 SM00823 Phosphopantetheine attachment site APT55_RS30705 SM00824 Thioesterase APT55_RS30710 SM00823 Phosphopantetheine attachment site APT55_RS30715 SM00823 Phosphopantetheine attachment site APT55_RS30725 SM00823 Phosphopantetheine attachment site APT55_RS30730 SM00823 Phosphopantetheine attachment site APT55_RS30735 SM00823 Phosphopantetheine attachment site APT55_RS30735 SM01294 APT55_RS30735 APT55_RS30740 SM00822 APT55_RS30740 APT55_RS30740 SM00823 Phosphopantetheine attachment site APT55_RS30740 SM00825 Beta-ketoacyl synthase APT55_RS30740 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. APT55_RS30745 SM00823 Phosphopantetheine attachment site APT55_RS30790 SM00382 ATPases associated with a variety of cellular activities APT55_RS30820 SM01321 APT55_RS30820 APT55_RS30840 SM00387 Histidine kinase-like ATPases APT55_RS30840 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS30840 SM00448 cheY-homologous receiver domain APT55_RS30855 SM00448 cheY-homologous receiver domain APT55_RS30865 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS30865 SM00091 PAS domain APT55_RS30865 SM00387 Histidine kinase-like ATPases APT55_RS30865 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS30865 SM00448 cheY-homologous receiver domain APT55_RS30870 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS30870 SM00091 PAS domain APT55_RS30870 SM00387 Histidine kinase-like ATPases APT55_RS30870 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS30870 SM00448 cheY-homologous receiver domain APT55_RS30875 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS30875 SM00091 PAS domain APT55_RS30875 SM00387 Histidine kinase-like ATPases APT55_RS30875 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS30875 SM00448 cheY-homologous receiver domain APT55_RS30880 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS30880 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS30880 SM00091 PAS domain APT55_RS30880 SM00387 Histidine kinase-like ATPases APT55_RS30880 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS30880 SM00448 cheY-homologous receiver domain APT55_RS30900 SM00857 Resolvase, N terminal domain APT55_RS30915 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS30915 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS30915 SM00387 Histidine kinase-like ATPases APT55_RS30935 SM00382 ATPases associated with a variety of cellular activities APT55_RS30950 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS30950 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS30950 SM00091 PAS domain APT55_RS30950 SM00387 Histidine kinase-like ATPases APT55_RS30950 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS30950 SM00448 cheY-homologous receiver domain APT55_RS30955 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. APT55_RS30955 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS30955 SM00091 PAS domain APT55_RS30955 SM00220 Serine/Threonine protein kinases, catalytic domain APT55_RS30955 SM00387 Histidine kinase-like ATPases APT55_RS30955 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS30955 SM00448 cheY-homologous receiver domain APT55_RS30960 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS30960 SM00091 PAS domain APT55_RS30960 SM00387 Histidine kinase-like ATPases APT55_RS30960 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS30960 SM00448 cheY-homologous receiver domain APT55_RS30965 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) APT55_RS30965 SM00091 PAS domain APT55_RS30965 SM00387 Histidine kinase-like ATPases APT55_RS30965 SM00388 His Kinase A (phosphoacceptor) domain APT55_RS30965 SM00448 cheY-homologous receiver domain APT55_RS31075 SM00470 ParB-like nuclease domain APT55_RS31090 SM00470 ParB-like nuclease domain APT55_RS31095 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS31290 SM00382 ATPases associated with a variety of cellular activities APT55_RS31300 SM00382 ATPases associated with a variety of cellular activities APT55_RS31375 SM00318 Staphylococcal nuclease homologues APT55_RS31375 SM00894 Excalibur calcium-binding domain APT55_RS31490 SM00382 ATPases associated with a variety of cellular activities APT55_RS31515 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS31520 SM00320 WD40 repeats APT55_RS31545 SM00320 WD40 repeats APT55_RS31560 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS31565 SM01236 APT55_RS31565 APT55_RS31680 SM00530 Helix-turn-helix XRE-family like proteins APT55_RS31735 SM00487 DEAD-like helicases superfamily APT55_RS31805 SM00885 D5 N terminal like APT55_RS31835 SM00421 helix_turn_helix, Lux Regulon APT55_RS31850 SM00100 Cyclic nucleotide-monophosphate binding domain APT55_RS31850 SM00382 ATPases associated with a variety of cellular activities APT55_RS31860 SM00382 ATPases associated with a variety of cellular activities