locus-tag class description LB4E_RS00005 PF11638 DnaA N-terminal domain LB4E_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LB4E_RS00005 PF00308 Bacterial dnaA protein LB4E_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LB4E_RS00010 PF02767 DNA polymerase III beta subunit, central domain LB4E_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LB4E_RS00015 PF02463 RecF/RecN/SMC N terminal domain LB4E_RS00025 PF01751 Toprim domain LB4E_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus LB4E_RS00025 PF00204 DNA gyrase B LB4E_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller LB4E_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A LB4E_RS00060 PF02954 Bacterial regulatory protein, Fis family LB4E_RS00060 PF00072 Response regulator receiver domain LB4E_RS00060 PF00158 Sigma-54 interaction domain LB4E_RS00075 PF02545 Maf-like protein LB4E_RS00095 PF01300 Telomere recombination LB4E_RS00110 PF14842 FliG N-terminal domain LB4E_RS00110 PF14841 FliG middle domain LB4E_RS00110 PF01706 FliG C-terminal domain LB4E_RS00120 PF01548 Transposase LB4E_RS00145 PF00459 Inositol monophosphatase family LB4E_RS00155 PF02449 Beta-galactosidase LB4E_RS00155 PF08533 Beta-galactosidase C-terminal domain LB4E_RS00155 PF08532 Beta-galactosidase trimerisation domain LB4E_RS00160 PF01430 Hsp33 protein LB4E_RS00165 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LB4E_RS00175 PF00773 RNB domain LB4E_RS00175 PF08206 Ribonuclease B OB domain LB4E_RS00175 PF17876 Cold shock domain LB4E_RS00175 PF00575 S1 RNA binding domain LB4E_RS00185 PF01487 Type I 3-dehydroquinase LB4E_RS00190 PF01380 SIS domain LB4E_RS00190 PF00571 CBS domain LB4E_RS00205 PF08447 PAS fold LB4E_RS00205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LB4E_RS00205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LB4E_RS00205 PF08447 PAS fold LB4E_RS00215 PF01370 NAD dependent epimerase/dehydratase family LB4E_RS00220 PF05222 Alanine dehydrogenase/PNT, N-terminal domain LB4E_RS00220 PF01262 Alanine dehydrogenase/PNT, C-terminal domain LB4E_RS00220 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LB4E_RS00230 PF03129 Anticodon binding domain LB4E_RS00230 PF13393 Histidyl-tRNA synthetase LB4E_RS00245 PF00809 Pterin binding enzyme LB4E_RS00270 PF03330 Lytic transglycolase LB4E_RS00270 PF05036 Sporulation related domain LB4E_RS00275 PF00132 Bacterial transferase hexapeptide (six repeats) LB4E_RS00275 PF06426 Serine acetyltransferase, N-terminal LB4E_RS00295 PF00375 Sodium:dicarboxylate symporter family LB4E_RS00335 PF00378 Enoyl-CoA hydratase/isomerase LB4E_RS00375 PF01678 Diaminopimelate epimerase LB4E_RS00445 PF00872 Transposase, Mutator family LB4E_RS00465 PF03588 Leucyl/phenylalanyl-tRNA protein transferase LB4E_RS00485 PF01053 Cys/Met metabolism PLP-dependent enzyme LB4E_RS00515 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease LB4E_RS00515 PF01694 Rhomboid family LB4E_RS00535 PF00475 Imidazoleglycerol-phosphate dehydratase LB4E_RS00540 PF00117 Glutamine amidotransferase class-I LB4E_RS00565 PF00753 Metallo-beta-lactamase superfamily LB4E_RS00605 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LB4E_RS00615 PF03193 RsgA GTPase LB4E_RS00615 PF16745 RsgA N-terminal domain LB4E_RS00640 PF02390 Putative methyltransferase LB4E_RS00665 PF01926 50S ribosome-binding GTPase LB4E_RS00690 PF00005 ABC transporter LB4E_RS00690 PF00664 ABC transporter transmembrane region LB4E_RS00695 PF01909 Nucleotidyltransferase domain LB4E_RS00695 PF01966 HD domain LB4E_RS00695 PF08335 GlnD PII-uridylyltransferase LB4E_RS00720 PF01264 Chorismate synthase LB4E_RS00730 PF00037 4Fe-4S binding domain LB4E_RS00770 PF00468 Ribosomal protein L34 LB4E_RS00775 PF01809 Putative membrane protein insertion efficiency factor LB4E_RS00780 PF02096 60Kd inner membrane protein LB4E_RS00785 PF14804 Jag N-terminus LB4E_RS00785 PF01424 R3H domain LB4E_RS00790 PF12631 MnmE helical domain LB4E_RS00790 PF10396 GTP-binding protein TrmE N-terminus LB4E_RS00790 PF01926 50S ribosome-binding GTPase LB4E_RS00795 PF00390 Malic enzyme, N-terminal domain LB4E_RS00795 PF03949 Malic enzyme, NAD binding domain LB4E_RS00795 PF01515 Phosphate acetyl/butaryl transferase LB4E_RS00805 PF10415 Fumarase C C-terminus LB4E_RS00805 PF00206 Lyase LB4E_RS00845 PF00849 RNA pseudouridylate synthase LB4E_RS00845 PF01479 S4 domain LB4E_RS00850 PF00849 RNA pseudouridylate synthase LB4E_RS00850 PF01479 S4 domain LB4E_RS00855 PF00795 Carbon-nitrogen hydrolase LB4E_RS00880 PF00459 Inositol monophosphatase family LB4E_RS00885 PF01548 Transposase LB4E_RS00910 PF16363 GDP-mannose 4,6 dehydratase LB4E_RS00915 PF02698 DUF218 domain LB4E_RS00940 PF01551 Peptidase family M23 LB4E_RS00940 PF01476 LysM domain LB4E_RS00945 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LB4E_RS00945 PF03120 NAD-dependent DNA ligase OB-fold domain LB4E_RS00945 PF01653 NAD-dependent DNA ligase adenylation domain LB4E_RS00945 PF00533 BRCA1 C Terminus (BRCT) domain LB4E_RS00990 PF01960 ArgJ family LB4E_RS01000 PF00486 Transcriptional regulatory protein, C terminal LB4E_RS01000 PF00072 Response regulator receiver domain LB4E_RS01025 PF00293 NUDIX domain LB4E_RS01030 PF01612 3'-5' exonuclease LB4E_RS01030 PF00570 HRDC domain LB4E_RS01035 PF00156 Phosphoribosyl transferase domain LB4E_RS01090 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LB4E_RS01095 PF00795 Carbon-nitrogen hydrolase LB4E_RS01120 PF00180 Isocitrate/isopropylmalate dehydrogenase LB4E_RS01130 PF00486 Transcriptional regulatory protein, C terminal LB4E_RS01130 PF00072 Response regulator receiver domain LB4E_RS01140 PF03819 MazG nucleotide pyrophosphohydrolase domain LB4E_RS01155 PF03641 Possible lysine decarboxylase LB4E_RS01175 PF00106 short chain dehydrogenase LB4E_RS01185 PF03781 Sulfatase-modifying factor enzyme 1 LB4E_RS01190 PF00271 Helicase conserved C-terminal domain LB4E_RS01190 PF00270 DEAD/DEAH box helicase LB4E_RS01205 PF07690 Major Facilitator Superfamily LB4E_RS01210 PF00719 Inorganic pyrophosphatase LB4E_RS01215 PF03279 Bacterial lipid A biosynthesis acyltransferase LB4E_RS01280 PF01872 RibD C-terminal domain LB4E_RS01285 PF00905 Penicillin binding protein transpeptidase domain LB4E_RS01285 PF00912 Transglycosylase LB4E_RS01295 PF08546 Ketopantoate reductase PanE/ApbA C terminal LB4E_RS01295 PF02558 Ketopantoate reductase PanE/ApbA LB4E_RS01330 PF13452 N-terminal half of MaoC dehydratase LB4E_RS01360 PF00873 AcrB/AcrD/AcrF family LB4E_RS01365 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LB4E_RS01375 PF00440 Bacterial regulatory proteins, tetR family LB4E_RS01380 PF00873 AcrB/AcrD/AcrF family LB4E_RS01390 PF02770 Acyl-CoA dehydrogenase, middle domain LB4E_RS01390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LB4E_RS01390 PF12806 Acetyl-CoA dehydrogenase C-terminal like LB4E_RS01420 PF02310 B12 binding domain LB4E_RS01420 PF04055 Radical SAM superfamily LB4E_RS01445 PF03193 RsgA GTPase LB4E_RS01455 PF05199 GMC oxidoreductase LB4E_RS01470 PF03372 Endonuclease/Exonuclease/phosphatase family LB4E_RS01480 PF05199 GMC oxidoreductase LB4E_RS01495 PF16916 Dimerisation domain of Zinc Transporter LB4E_RS01495 PF01545 Cation efflux family LB4E_RS01520 PF02080 TrkA-C domain LB4E_RS01520 PF00999 Sodium/hydrogen exchanger family LB4E_RS01520 PF03471 Transporter associated domain LB4E_RS01525 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LB4E_RS01530 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LB4E_RS01530 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LB4E_RS01540 PF00905 Penicillin binding protein transpeptidase domain LB4E_RS01540 PF00912 Transglycosylase LB4E_RS01540 PF17092 Penicillin-binding protein OB-like domain LB4E_RS01550 PF01551 Peptidase family M23 LB4E_RS01575 PF00378 Enoyl-CoA hydratase/isomerase LB4E_RS01620 PF16124 RecQ zinc-binding LB4E_RS01620 PF00570 HRDC domain LB4E_RS01620 PF09382 RQC domain LB4E_RS01620 PF00270 DEAD/DEAH box helicase LB4E_RS01620 PF00271 Helicase conserved C-terminal domain LB4E_RS01635 PF01207 Dihydrouridine synthase (Dus) LB4E_RS01660 PF01420 Type I restriction modification DNA specificity domain LB4E_RS01665 PF02384 N-6 DNA Methylase LB4E_RS01665 PF12161 HsdM N-terminal domain LB4E_RS01725 PF01475 Ferric uptake regulator family LB4E_RS01735 PF01740 STAS domain LB4E_RS01755 PF13291 ACT domain LB4E_RS01755 PF04607 Region found in RelA / SpoT proteins LB4E_RS01755 PF02824 TGS domain LB4E_RS01760 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LB4E_RS01770 PF00206 Lyase LB4E_RS01770 PF10397 Adenylosuccinate lyase C-terminus LB4E_RS01815 PF03372 Endonuclease/Exonuclease/phosphatase family LB4E_RS01820 PF07690 Major Facilitator Superfamily LB4E_RS01825 PF02678 Pirin LB4E_RS01825 PF05726 Pirin C-terminal cupin domain LB4E_RS01835 PF00009 Elongation factor Tu GTP binding domain LB4E_RS01835 PF03144 Elongation factor Tu domain 2 LB4E_RS01835 PF00679 Elongation factor G C-terminus LB4E_RS01880 PF01938 TRAM domain LB4E_RS01880 PF00919 Uncharacterized protein family UPF0004 LB4E_RS01880 PF04055 Radical SAM superfamily LB4E_RS01900 PF02142 MGS-like domain LB4E_RS01915 PF03741 Integral membrane protein TerC family LB4E_RS01915 PF03471 Transporter associated domain LB4E_RS01925 PF00582 Universal stress protein family LB4E_RS01980 PF08447 PAS fold LB4E_RS01980 PF08448 PAS fold LB4E_RS01980 PF00563 EAL domain LB4E_RS01980 PF00990 Diguanylate cyclase, GGDEF domain LB4E_RS01990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LB4E_RS01990 PF00672 HAMP domain LB4E_RS02020 PF00378 Enoyl-CoA hydratase/isomerase LB4E_RS02035 PF03062 MBOAT, membrane-bound O-acyltransferase family LB4E_RS02045 PF04542 Sigma-70 region 2 LB4E_RS02045 PF08281 Sigma-70, region 4 LB4E_RS02060 PF00701 Dihydrodipicolinate synthetase family LB4E_RS02065 PF01113 Dihydrodipicolinate reductase, N-terminus LB4E_RS02065 PF05173 Dihydrodipicolinate reductase, C-terminus LB4E_RS02070 PF02457 DisA bacterial checkpoint controller nucleotide-binding LB4E_RS02070 PF10372 Bacterial membrane-spanning protein N-terminus LB4E_RS02080 PF01648 4'-phosphopantetheinyl transferase superfamily LB4E_RS02095 PF00318 Ribosomal protein S2 LB4E_RS02100 PF00889 Elongation factor TS LB4E_RS02105 PF00696 Amino acid kinase family LB4E_RS02110 PF01765 Ribosome recycling factor LB4E_RS02125 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LB4E_RS02125 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LB4E_RS02125 PF13288 DXP reductoisomerase C-terminal domain LB4E_RS02130 PF02163 Peptidase family M50 LB4E_RS02140 PF00291 Pyridoxal-phosphate dependent enzyme LB4E_RS02160 PF00211 Adenylate and Guanylate cyclase catalytic domain LB4E_RS02160 PF00072 Response regulator receiver domain LB4E_RS02165 PF02779 Transketolase, pyrimidine binding domain LB4E_RS02165 PF02780 Transketolase, C-terminal domain LB4E_RS02165 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LB4E_RS02200 PF00550 Phosphopantetheine attachment site LB4E_RS02205 PF14622 Ribonuclease-III-like LB4E_RS02205 PF00035 Double-stranded RNA binding motif LB4E_RS02215 PF01761 3-dehydroquinate synthase LB4E_RS02235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LB4E_RS02250 PF02540 NAD synthase LB4E_RS02250 PF00795 Carbon-nitrogen hydrolase LB4E_RS02260 PF00156 Phosphoribosyl transferase domain LB4E_RS02300 PF00873 AcrB/AcrD/AcrF family LB4E_RS02345 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LB4E_RS02370 PF00005 ABC transporter LB4E_RS02380 PF08486 Stage II sporulation protein LB4E_RS02445 PF00034 Cytochrome c LB4E_RS02445 PF03150 Di-haem cytochrome c peroxidase LB4E_RS02465 PF00535 Glycosyl transferase family 2 LB4E_RS02500 PF04307 LexA-binding, inner membrane-associated putative hydrolase LB4E_RS02505 PF00920 Dehydratase family LB4E_RS02515 PF01850 PIN domain LB4E_RS02520 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin LB4E_RS02535 PF01553 Acyltransferase LB4E_RS02540 PF01569 PAP2 superfamily LB4E_RS02555 PF00072 Response regulator receiver domain LB4E_RS02555 PF08279 HTH domain LB4E_RS02585 PF04134 Protein of unknown function, DUF393 LB4E_RS02590 PF01476 LysM domain LB4E_RS02590 PF08525 Opacity-associated protein A N-terminal motif LB4E_RS02590 PF01551 Peptidase family M23 LB4E_RS02600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LB4E_RS02620 PF07883 Cupin domain LB4E_RS02620 PF01381 Helix-turn-helix LB4E_RS02650 PF07992 Pyridine nucleotide-disulphide oxidoreductase LB4E_RS02650 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LB4E_RS02720 PF03775 Septum formation inhibitor MinC, C-terminal domain LB4E_RS02725 PF01008 Initiation factor 2 subunit family LB4E_RS02745 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LB4E_RS02745 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LB4E_RS02755 PF16658 Class II release factor RF3, C-terminal domain LB4E_RS02755 PF00009 Elongation factor Tu GTP binding domain LB4E_RS02755 PF03144 Elongation factor Tu domain 2 LB4E_RS02770 PF07568 Histidine kinase LB4E_RS02770 PF12282 Signal transduction histidine kinase LB4E_RS02770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS02780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS02780 PF07568 Histidine kinase LB4E_RS02780 PF12282 Signal transduction histidine kinase LB4E_RS02785 PF13183 4Fe-4S dicluster domain LB4E_RS02785 PF02754 Cysteine-rich domain LB4E_RS02805 PF04055 Radical SAM superfamily LB4E_RS02815 PF00990 Diguanylate cyclase, GGDEF domain LB4E_RS02815 PF17151 Periplasmic sensor domain LB4E_RS02830 PF12544 Lysine-2,3-aminomutase LB4E_RS02830 PF04055 Radical SAM superfamily LB4E_RS02835 PF07478 D-ala D-ala ligase C-terminus LB4E_RS02835 PF01820 D-ala D-ala ligase N-terminus LB4E_RS02895 PF01544 CorA-like Mg2+ transporter protein LB4E_RS02930 PF10141 Single-strand DNA-specific exonuclease, C terminal domain LB4E_RS02930 PF01368 DHH family LB4E_RS02930 PF17768 RecJ OB domain LB4E_RS02930 PF02272 DHHA1 domain LB4E_RS02940 PF07499 RuvA, C-terminal domain LB4E_RS02940 PF01330 RuvA N terminal domain LB4E_RS02945 PF01726 LexA DNA binding domain LB4E_RS02945 PF00717 Peptidase S24-like LB4E_RS02955 PF03572 Peptidase family S41 LB4E_RS02955 PF13180 PDZ domain LB4E_RS02960 PF00814 Glycoprotease family LB4E_RS02965 PF01066 CDP-alcohol phosphatidyltransferase LB4E_RS02975 PF01555 DNA methylase LB4E_RS02975 PF18755 Restriction Enzyme Adenine Methylase Associated LB4E_RS03015 PF00873 AcrB/AcrD/AcrF family LB4E_RS03030 PF01546 Peptidase family M20/M25/M40 LB4E_RS03030 PF07687 Peptidase dimerisation domain LB4E_RS03035 PF00999 Sodium/hydrogen exchanger family LB4E_RS03040 PF05569 BlaR1 peptidase M56 LB4E_RS03040 PF00905 Penicillin binding protein transpeptidase domain LB4E_RS03060 PF00460 Flagella basal body rod protein LB4E_RS03060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LB4E_RS03070 PF02107 Flagellar L-ring protein LB4E_RS03075 PF02119 Flagellar P-ring protein LB4E_RS03085 PF03631 Virulence factor BrkB LB4E_RS03090 PF08241 Methyltransferase domain LB4E_RS03145 PF00118 TCP-1/cpn60 chaperonin family LB4E_RS03150 PF00166 Chaperonin 10 Kd subunit LB4E_RS03165 PF00211 Adenylate and Guanylate cyclase catalytic domain LB4E_RS03195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LB4E_RS03195 PF18269 T3SS EscN ATPase C-terminal domain LB4E_RS03195 PF02874 ATP synthase alpha/beta family, beta-barrel domain LB4E_RS03200 PF02108 Flagellar assembly protein FliH LB4E_RS03210 PF08345 Flagellar M-ring protein C-terminal LB4E_RS03210 PF01514 Secretory protein of YscJ/FliF family LB4E_RS03255 PF00884 Sulfatase LB4E_RS03260 PF02421 Ferrous iron transport protein B LB4E_RS03260 PF07670 Nucleoside recognition LB4E_RS03260 PF07664 Ferrous iron transport protein B C terminus LB4E_RS03270 PF03109 ABC1 family LB4E_RS03285 PF00672 HAMP domain LB4E_RS03285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LB4E_RS03285 PF02743 Cache domain LB4E_RS03300 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LB4E_RS03300 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LB4E_RS03300 PF00205 Thiamine pyrophosphate enzyme, central domain LB4E_RS03305 PF10369 Small subunit of acetolactate synthase LB4E_RS03320 PF00933 Glycosyl hydrolase family 3 N terminal domain LB4E_RS03320 PF01915 Glycosyl hydrolase family 3 C-terminal domain LB4E_RS03325 PF13472 GDSL-like Lipase/Acylhydrolase family LB4E_RS03340 PF00574 Clp protease LB4E_RS03345 PF06689 ClpX C4-type zinc finger LB4E_RS03345 PF10431 C-terminal, D2-small domain, of ClpB protein LB4E_RS03345 PF07724 AAA domain (Cdc48 subfamily) LB4E_RS03365 PF01636 Phosphotransferase enzyme family LB4E_RS03375 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LB4E_RS03420 PF12848 ABC transporter LB4E_RS03420 PF16326 ABC transporter C-terminal domain LB4E_RS03420 PF00005 ABC transporter LB4E_RS03435 PF00211 Adenylate and Guanylate cyclase catalytic domain LB4E_RS03440 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LB4E_RS03455 PF13581 Histidine kinase-like ATPase domain LB4E_RS03455 PF13426 PAS domain LB4E_RS03455 PF07568 Histidine kinase LB4E_RS03475 PF01590 GAF domain LB4E_RS03475 PF00990 Diguanylate cyclase, GGDEF domain LB4E_RS03475 PF00360 Phytochrome region LB4E_RS03475 PF00563 EAL domain LB4E_RS03480 PF13660 Domain of unknown function (DUF4147) LB4E_RS03480 PF05161 MOFRL family LB4E_RS03490 PF03372 Endonuclease/Exonuclease/phosphatase family LB4E_RS03495 PF00815 Histidinol dehydrogenase LB4E_RS03515 PF02673 Bacitracin resistance protein BacA LB4E_RS03525 PF02397 Bacterial sugar transferase LB4E_RS03530 PF02686 Glu-tRNAGln amidotransferase C subunit LB4E_RS03535 PF01425 Amidase LB4E_RS03540 PF00977 Histidine biosynthesis protein LB4E_RS03565 PF05448 Acetyl xylan esterase (AXE1) LB4E_RS03570 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LB4E_RS03570 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LB4E_RS03575 PF00152 tRNA synthetases class II (D, K and N) LB4E_RS03575 PF01336 OB-fold nucleic acid binding domain LB4E_RS03615 PF02772 S-adenosylmethionine synthetase, central domain LB4E_RS03615 PF02773 S-adenosylmethionine synthetase, C-terminal domain LB4E_RS03615 PF00438 S-adenosylmethionine synthetase, N-terminal domain LB4E_RS03620 PF02780 Transketolase, C-terminal domain LB4E_RS03620 PF02779 Transketolase, pyrimidine binding domain LB4E_RS03640 PF01575 MaoC like domain LB4E_RS03660 PF01432 Peptidase family M3 LB4E_RS03670 PF14497 Glutathione S-transferase, C-terminal domain LB4E_RS03670 PF13417 Glutathione S-transferase, N-terminal domain LB4E_RS03675 PF00106 short chain dehydrogenase LB4E_RS03680 PF04116 Fatty acid hydroxylase superfamily LB4E_RS03695 PF02666 Phosphatidylserine decarboxylase LB4E_RS03705 PF04509 CheC-like family LB4E_RS03705 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LB4E_RS03715 PF00813 FliP family LB4E_RS03720 PF01313 Bacterial export proteins, family 3 LB4E_RS03725 PF01311 Bacterial export proteins, family 1 LB4E_RS03735 PF00771 FHIPEP family LB4E_RS03740 PF00448 SRP54-type protein, GTPase domain LB4E_RS03745 PF10609 NUBPL iron-transfer P-loop NTPase LB4E_RS03755 PF04542 Sigma-70 region 2 LB4E_RS03755 PF04539 Sigma-70 region 3 LB4E_RS03755 PF04545 Sigma-70, region 4 LB4E_RS03775 PF04025 Domain of unknown function (DUF370) LB4E_RS03780 PF00625 Guanylate kinase LB4E_RS03790 PF04851 Type III restriction enzyme, res subunit LB4E_RS03790 PF13307 Helicase C-terminal domain LB4E_RS03795 PF00209 Sodium:neurotransmitter symporter family LB4E_RS03815 PF00072 Response regulator receiver domain LB4E_RS03815 PF00211 Adenylate and Guanylate cyclase catalytic domain LB4E_RS03835 PF00672 HAMP domain LB4E_RS03835 PF07228 Stage II sporulation protein E (SpoIIE) LB4E_RS03860 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) LB4E_RS03865 PF08264 Anticodon-binding domain of tRNA LB4E_RS03865 PF09334 tRNA synthetases class I (M) LB4E_RS03865 PF01588 Putative tRNA binding domain LB4E_RS03885 PF00665 Integrase core domain LB4E_RS03885 PF13276 HTH-like domain LB4E_RS03885 PF13333 Integrase core domain LB4E_RS04025 PF00460 Flagella basal body rod protein LB4E_RS04025 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LB4E_RS04030 PF01475 Ferric uptake regulator family LB4E_RS04040 PF00199 Catalase LB4E_RS04040 PF06628 Catalase-related immune-responsive LB4E_RS04085 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LB4E_RS04105 PF00902 Sec-independent protein translocase protein (TatC) LB4E_RS04110 PF02416 mttA/Hcf106 family LB4E_RS04120 PF00085 Thioredoxin LB4E_RS04130 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LB4E_RS04130 PF02770 Acyl-CoA dehydrogenase, middle domain LB4E_RS04130 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LB4E_RS04145 PF07690 Major Facilitator Superfamily LB4E_RS04155 PF02577 Bifunctional nuclease LB4E_RS04210 PF00113 Enolase, C-terminal TIM barrel domain LB4E_RS04210 PF03952 Enolase, N-terminal domain LB4E_RS04220 PF00574 Clp protease LB4E_RS04285 PF00873 AcrB/AcrD/AcrF family LB4E_RS04290 PF00873 AcrB/AcrD/AcrF family LB4E_RS04310 PF00535 Glycosyl transferase family 2 LB4E_RS04325 PF00106 short chain dehydrogenase LB4E_RS04330 PF04376 Arginine-tRNA-protein transferase, N terminus LB4E_RS04330 PF04377 Arginine-tRNA-protein transferase, C terminus LB4E_RS04340 PF13456 Reverse transcriptase-like LB4E_RS04340 PF00300 Histidine phosphatase superfamily (branch 1) LB4E_RS04385 PF00478 IMP dehydrogenase / GMP reductase domain LB4E_RS04385 PF00571 CBS domain LB4E_RS04395 PF04452 RNA methyltransferase LB4E_RS04405 PF02581 Thiamine monophosphate synthase LB4E_RS04410 PF03808 Glycosyl transferase WecB/TagA/CpsF family LB4E_RS04420 PF01336 OB-fold nucleic acid binding domain LB4E_RS04420 PF00152 tRNA synthetases class II (D, K and N) LB4E_RS04430 PF03170 Bacterial cellulose synthase subunit LB4E_RS04430 PF03552 Cellulose synthase LB4E_RS04430 PF00535 Glycosyl transferase family 2 LB4E_RS04430 PF07238 PilZ domain LB4E_RS04435 PF01522 Polysaccharide deacetylase LB4E_RS04435 PF14883 Hypothetical glycosyl hydrolase family 13 LB4E_RS04485 PF01066 CDP-alcohol phosphatidyltransferase LB4E_RS04510 PF14842 FliG N-terminal domain LB4E_RS04510 PF14841 FliG middle domain LB4E_RS04510 PF01706 FliG C-terminal domain LB4E_RS04515 PF00364 Biotin-requiring enzyme LB4E_RS04515 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LB4E_RS04515 PF02817 e3 binding domain LB4E_RS04520 PF02780 Transketolase, C-terminal domain LB4E_RS04520 PF00364 Biotin-requiring enzyme LB4E_RS04520 PF02779 Transketolase, pyrimidine binding domain LB4E_RS04525 PF00676 Dehydrogenase E1 component LB4E_RS04530 PF00072 Response regulator receiver domain LB4E_RS04530 PF00486 Transcriptional regulatory protein, C terminal LB4E_RS04535 PF00672 HAMP domain LB4E_RS04535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS04535 PF00512 His Kinase A (phospho-acceptor) domain LB4E_RS04550 PF00700 Bacterial flagellin C-terminal helical region LB4E_RS04550 PF00669 Bacterial flagellin N-terminal helical region LB4E_RS04560 PF00700 Bacterial flagellin C-terminal helical region LB4E_RS04560 PF00669 Bacterial flagellin N-terminal helical region LB4E_RS04575 PF07075 Protein of unknown function (DUF1343) LB4E_RS04615 PF00005 ABC transporter LB4E_RS04620 PF02405 Permease MlaE LB4E_RS04630 PF01820 D-ala D-ala ligase N-terminus LB4E_RS04630 PF07478 D-ala D-ala ligase C-terminus LB4E_RS04635 PF07021 Methionine biosynthesis protein MetW LB4E_RS04635 PF00561 alpha/beta hydrolase fold LB4E_RS04640 PF00561 alpha/beta hydrolase fold LB4E_RS04650 PF04452 RNA methyltransferase LB4E_RS04665 PF01434 Peptidase family M41 LB4E_RS04665 PF17862 AAA+ lid domain LB4E_RS04665 PF00004 ATPase family associated with various cellular activities (AAA) LB4E_RS04670 PF04509 CheC-like family LB4E_RS04670 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LB4E_RS04675 PF02086 D12 class N6 adenine-specific DNA methyltransferase LB4E_RS04680 PF01145 SPFH domain / Band 7 family LB4E_RS04685 PF01145 SPFH domain / Band 7 family LB4E_RS04700 PF00206 Lyase LB4E_RS04700 PF14698 Argininosuccinate lyase C-terminal LB4E_RS04705 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LB4E_RS04720 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LB4E_RS04720 PF02154 Flagellar motor switch protein FliM LB4E_RS04735 PF04193 PQ loop repeat LB4E_RS04770 PF00535 Glycosyl transferase family 2 LB4E_RS04780 PF13580 SIS domain LB4E_RS04785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LB4E_RS04785 PF00005 ABC transporter LB4E_RS04795 PF00330 Aconitase family (aconitate hydratase) LB4E_RS04800 PF00694 Aconitase C-terminal domain LB4E_RS04805 PF00291 Pyridoxal-phosphate dependent enzyme LB4E_RS04820 PF04542 Sigma-70 region 2 LB4E_RS04820 PF08281 Sigma-70, region 4 LB4E_RS04830 PF02617 ATP-dependent Clp protease adaptor protein ClpS LB4E_RS04835 PF10431 C-terminal, D2-small domain, of ClpB protein LB4E_RS04835 PF02861 Clp amino terminal domain, pathogenicity island component LB4E_RS04835 PF17871 AAA lid domain LB4E_RS04835 PF07724 AAA domain (Cdc48 subfamily) LB4E_RS04835 PF00004 ATPase family associated with various cellular activities (AAA) LB4E_RS04845 PF04262 Glutamate-cysteine ligase LB4E_RS04850 PF04262 Glutamate-cysteine ligase LB4E_RS04850 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LB4E_RS04850 PF18419 ATP-grasp-like domain LB4E_RS04860 PF00462 Glutaredoxin LB4E_RS04865 PF01722 BolA-like protein LB4E_RS04870 PF01722 BolA-like protein LB4E_RS04875 PF01061 ABC-2 type transporter LB4E_RS04880 PF00005 ABC transporter LB4E_RS04885 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LB4E_RS04885 PF07992 Pyridine nucleotide-disulphide oxidoreductase LB4E_RS04885 PF00403 Heavy-metal-associated domain LB4E_RS04890 PF00753 Metallo-beta-lactamase superfamily LB4E_RS04890 PF16123 Hydroxyacylglutathione hydrolase C-terminus LB4E_RS04900 PF00753 Metallo-beta-lactamase superfamily LB4E_RS04900 PF12706 Beta-lactamase superfamily domain LB4E_RS04905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LB4E_RS04905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LB4E_RS04930 PF03062 MBOAT, membrane-bound O-acyltransferase family LB4E_RS04935 PF01343 Peptidase family S49 LB4E_RS04970 PF00474 Sodium:solute symporter family LB4E_RS04975 PF08544 GHMP kinases C terminal LB4E_RS04975 PF00288 GHMP kinases N terminal domain LB4E_RS04990 PF13462 Thioredoxin LB4E_RS04990 PF06965 Na+/H+ antiporter 1 LB4E_RS04995 PF00056 lactate/malate dehydrogenase, NAD binding domain LB4E_RS04995 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LB4E_RS05000 PF00155 Aminotransferase class I and II LB4E_RS05010 PF00202 Aminotransferase class-III LB4E_RS05030 PF01624 MutS domain I LB4E_RS05030 PF05188 MutS domain II LB4E_RS05030 PF05192 MutS domain III LB4E_RS05030 PF05190 MutS family domain IV LB4E_RS05030 PF00488 MutS domain V LB4E_RS05035 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LB4E_RS05040 PF02578 Multi-copper polyphenol oxidoreductase laccase LB4E_RS05045 PF00072 Response regulator receiver domain LB4E_RS05050 PF00180 Isocitrate/isopropylmalate dehydrogenase LB4E_RS05055 PF00202 Aminotransferase class-III LB4E_RS05070 PF00155 Aminotransferase class I and II LB4E_RS05085 PF00830 Ribosomal L28 family LB4E_RS05090 PF00730 HhH-GPD superfamily base excision DNA repair protein LB4E_RS05090 PF00633 Helix-hairpin-helix motif LB4E_RS05100 PF00472 RF-1 domain LB4E_RS05100 PF03462 PCRF domain LB4E_RS05105 PF08459 UvrC Helix-hairpin-helix N-terminal LB4E_RS05105 PF02151 UvrB/uvrC motif LB4E_RS05105 PF01541 GIY-YIG catalytic domain LB4E_RS05105 PF12826 Helix-hairpin-helix motif LB4E_RS05125 PF00534 Glycosyl transferases group 1 LB4E_RS05125 PF13439 Glycosyltransferase Family 4 LB4E_RS05160 PF00501 AMP-binding enzyme LB4E_RS05165 PF01118 Semialdehyde dehydrogenase, NAD binding domain LB4E_RS05165 PF02774 Semialdehyde dehydrogenase, dimerisation domain LB4E_RS05170 PF00154 recA bacterial DNA recombination protein LB4E_RS05190 PF01523 Putative modulator of DNA gyrase LB4E_RS05195 PF01523 Putative modulator of DNA gyrase LB4E_RS05235 PF00580 UvrD/REP helicase N-terminal domain LB4E_RS05235 PF13361 UvrD-like helicase C-terminal domain LB4E_RS05240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LB4E_RS05255 PF07992 Pyridine nucleotide-disulphide oxidoreductase LB4E_RS05255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LB4E_RS05260 PF01471 Putative peptidoglycan binding domain LB4E_RS05260 PF01510 N-acetylmuramoyl-L-alanine amidase LB4E_RS05265 PF00682 HMGL-like LB4E_RS05265 PF08502 LeuA allosteric (dimerisation) domain LB4E_RS05275 PF16916 Dimerisation domain of Zinc Transporter LB4E_RS05275 PF01545 Cation efflux family LB4E_RS05280 PF13677 Membrane MotB of proton-channel complex MotA/MotB LB4E_RS05280 PF00691 OmpA family LB4E_RS05300 PF00072 Response regulator receiver domain LB4E_RS05300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS05300 PF13426 PAS domain LB4E_RS05305 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LB4E_RS05325 PF01165 Ribosomal protein S21 LB4E_RS05365 PF01266 FAD dependent oxidoreductase LB4E_RS05365 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LB4E_RS05370 PF00579 tRNA synthetases class I (W and Y) LB4E_RS05395 PF07715 TonB-dependent Receptor Plug Domain LB4E_RS05395 PF00593 TonB dependent receptor LB4E_RS05470 PF01327 Polypeptide deformylase LB4E_RS05485 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain LB4E_RS05485 PF07228 Stage II sporulation protein E (SpoIIE) LB4E_RS05490 PF01740 STAS domain LB4E_RS05495 PF01039 Carboxyl transferase domain LB4E_RS05500 PF02785 Biotin carboxylase C-terminal domain LB4E_RS05500 PF00289 Biotin carboxylase, N-terminal domain LB4E_RS05500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LB4E_RS05505 PF00072 Response regulator receiver domain LB4E_RS05505 PF01339 CheB methylesterase LB4E_RS05510 PF03975 CheD chemotactic sensory transduction LB4E_RS05515 PF01584 CheW-like domain LB4E_RS05520 PF17202 Single cache domain 3 LB4E_RS05520 PF00672 HAMP domain LB4E_RS05520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LB4E_RS05525 PF02895 Signal transducing histidine kinase, homodimeric domain LB4E_RS05525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS05525 PF01627 Hpt domain LB4E_RS05525 PF07194 P2 response regulator binding domain LB4E_RS05525 PF01584 CheW-like domain LB4E_RS05535 PF00072 Response regulator receiver domain LB4E_RS05535 PF00486 Transcriptional regulatory protein, C terminal LB4E_RS05540 PF00072 Response regulator receiver domain LB4E_RS05550 PF02401 LytB protein LB4E_RS05555 PF00700 Bacterial flagellin C-terminal helical region LB4E_RS05555 PF00669 Bacterial flagellin N-terminal helical region LB4E_RS05575 PF00873 AcrB/AcrD/AcrF family LB4E_RS05580 PF00669 Bacterial flagellin N-terminal helical region LB4E_RS05580 PF00700 Bacterial flagellin C-terminal helical region LB4E_RS05585 PF01923 Cobalamin adenosyltransferase LB4E_RS05590 PF00854 POT family LB4E_RS05605 PF00665 Integrase core domain LB4E_RS05620 PF17755 UvrA DNA-binding domain LB4E_RS05620 PF17760 UvrA interaction domain LB4E_RS05625 PF01343 Peptidase family S49 LB4E_RS05680 PF17932 Tetracyclin repressor-like, C-terminal domain LB4E_RS05680 PF00440 Bacterial regulatory proteins, tetR family LB4E_RS05685 PF16901 C-terminal domain of alpha-glycerophosphate oxidase LB4E_RS05685 PF01266 FAD dependent oxidoreductase LB4E_RS05720 PF00266 Aminotransferase class-V LB4E_RS05735 PF13286 Phosphohydrolase-associated domain LB4E_RS05735 PF01966 HD domain LB4E_RS05740 PF09335 SNARE associated Golgi protein LB4E_RS05770 PF00551 Formyl transferase LB4E_RS05775 PF02142 MGS-like domain LB4E_RS05775 PF01808 AICARFT/IMPCHase bienzyme LB4E_RS05790 PF00923 Transaldolase/Fructose-6-phosphate aldolase LB4E_RS05800 PF03062 MBOAT, membrane-bound O-acyltransferase family LB4E_RS05805 PF01479 S4 domain LB4E_RS05805 PF00849 RNA pseudouridylate synthase LB4E_RS05830 PF08713 DNA alkylation repair enzyme LB4E_RS05850 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LB4E_RS05875 PF00501 AMP-binding enzyme LB4E_RS05880 PF00578 AhpC/TSA family LB4E_RS05895 PF00459 Inositol monophosphatase family LB4E_RS05905 PF00580 UvrD/REP helicase N-terminal domain LB4E_RS05905 PF13361 UvrD-like helicase C-terminal domain LB4E_RS05915 PF02472 Biopolymer transport protein ExbD/TolR LB4E_RS05920 PF01618 MotA/TolQ/ExbB proton channel family LB4E_RS05925 PF13476 AAA domain LB4E_RS05930 PF08668 HDOD domain LB4E_RS05940 PF01022 Bacterial regulatory protein, arsR family LB4E_RS05950 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase LB4E_RS05955 PF00633 Helix-hairpin-helix motif LB4E_RS05955 PF14815 NUDIX domain LB4E_RS05955 PF00730 HhH-GPD superfamily base excision DNA repair protein LB4E_RS05970 PF01926 50S ribosome-binding GTPase LB4E_RS05970 PF06071 Protein of unknown function (DUF933) LB4E_RS06000 PF01883 Iron-sulfur cluster assembly protein LB4E_RS06000 PF10609 NUBPL iron-transfer P-loop NTPase LB4E_RS06010 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LB4E_RS06010 PF00364 Biotin-requiring enzyme LB4E_RS06010 PF02817 e3 binding domain LB4E_RS06020 PF07995 Glucose / Sorbosone dehydrogenase LB4E_RS06030 PF00227 Proteasome subunit LB4E_RS06035 PF00589 Phage integrase family LB4E_RS06035 PF02899 Phage integrase, N-terminal SAM-like domain LB4E_RS06045 PF08502 LeuA allosteric (dimerisation) domain LB4E_RS06045 PF00682 HMGL-like LB4E_RS06050 PF01713 Smr domain LB4E_RS06050 PF00488 MutS domain V LB4E_RS06075 PF02601 Exonuclease VII, large subunit LB4E_RS06075 PF13742 OB-fold nucleic acid binding domain LB4E_RS06080 PF02609 Exonuclease VII small subunit LB4E_RS06140 PF08334 Type II secretion system (T2SS), protein G LB4E_RS06140 PF07963 Prokaryotic N-terminal methylation motif LB4E_RS06145 PF00482 Type II secretion system (T2SS), protein F LB4E_RS06150 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LB4E_RS06150 PF00437 Type II/IV secretion system protein LB4E_RS06155 PF03958 Bacterial type II/III secretion system short domain LB4E_RS06155 PF00263 Bacterial type II and III secretion system protein LB4E_RS06165 PF01551 Peptidase family M23 LB4E_RS06165 PF08525 Opacity-associated protein A N-terminal motif LB4E_RS06165 PF01476 LysM domain LB4E_RS06175 PF01078 Magnesium chelatase, subunit ChlI LB4E_RS06175 PF13335 Magnesium chelatase, subunit ChlI C-terminal LB4E_RS06185 PF02021 Uncharacterised protein family UPF0102 LB4E_RS06190 PF00072 Response regulator receiver domain LB4E_RS06195 PF01312 FlhB HrpN YscU SpaS Family LB4E_RS06205 PF01351 Ribonuclease HII LB4E_RS06210 PF01245 Ribosomal protein L19 LB4E_RS06215 PF01746 tRNA (Guanine-1)-methyltransferase LB4E_RS06220 PF01782 RimM N-terminal domain LB4E_RS06230 PF00886 Ribosomal protein S16 LB4E_RS06235 PF00834 Ribulose-phosphate 3 epimerase family LB4E_RS06245 PF02911 Formyl transferase, C-terminal domain LB4E_RS06245 PF00551 Formyl transferase LB4E_RS06270 PF00381 PTS HPr component phosphorylation site LB4E_RS06275 PF07475 HPr Serine kinase C-terminal domain LB4E_RS06275 PF02603 HPr Serine kinase N terminus LB4E_RS06280 PF04552 Sigma-54, DNA binding domain LB4E_RS06280 PF04963 Sigma-54 factor, core binding domain LB4E_RS06280 PF00309 Sigma-54 factor, Activator interacting domain (AID) LB4E_RS06285 PF00005 ABC transporter LB4E_RS06300 PF00793 DAHP synthetase I family LB4E_RS06305 PF00117 Glutamine amidotransferase class-I LB4E_RS06305 PF06418 CTP synthase N-terminus LB4E_RS06310 PF00294 pfkB family carbohydrate kinase LB4E_RS06310 PF01467 Cytidylyltransferase-like LB4E_RS06315 PF01467 Cytidylyltransferase-like LB4E_RS06315 PF00294 pfkB family carbohydrate kinase LB4E_RS06325 PF08331 Domain of unknown function (DUF1730) LB4E_RS06340 PF00557 Metallopeptidase family M24 LB4E_RS06365 PF00005 ABC transporter LB4E_RS06425 PF00115 Cytochrome C and Quinol oxidase polypeptide I LB4E_RS06445 PF12801 4Fe-4S binding domain LB4E_RS06445 PF13746 4Fe-4S dicluster domain LB4E_RS06445 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase LB4E_RS06455 PF00403 Heavy-metal-associated domain LB4E_RS06460 PF03597 Cytochrome oxidase maturation protein cbb3-type LB4E_RS06485 PF00589 Phage integrase family LB4E_RS06485 PF02899 Phage integrase, N-terminal SAM-like domain LB4E_RS06500 PF03062 MBOAT, membrane-bound O-acyltransferase family LB4E_RS06510 PF07992 Pyridine nucleotide-disulphide oxidoreductase LB4E_RS06520 PF00128 Alpha amylase, catalytic domain LB4E_RS06520 PF02806 Alpha amylase, C-terminal all-beta domain LB4E_RS06520 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) LB4E_RS06565 PF00561 alpha/beta hydrolase fold LB4E_RS06585 PF02910 Fumarate reductase flavoprotein C-term LB4E_RS06585 PF00890 FAD binding domain LB4E_RS06590 PF13085 2Fe-2S iron-sulfur cluster binding domain LB4E_RS06605 PF00679 Elongation factor G C-terminus LB4E_RS06605 PF00009 Elongation factor Tu GTP binding domain LB4E_RS06605 PF03144 Elongation factor Tu domain 2 LB4E_RS06605 PF06421 GTP-binding protein LepA C-terminus LB4E_RS06615 PF01548 Transposase LB4E_RS06620 PF01548 Transposase LB4E_RS06665 PF00072 Response regulator receiver domain LB4E_RS06665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LB4E_RS06665 PF01627 Hpt domain LB4E_RS06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS06665 PF00672 HAMP domain LB4E_RS06665 PF00512 His Kinase A (phospho-acceptor) domain LB4E_RS06680 PF03705 CheR methyltransferase, all-alpha domain LB4E_RS06680 PF01739 CheR methyltransferase, SAM binding domain LB4E_RS06715 PF02594 Uncharacterised ACR, YggU family COG1872 LB4E_RS06720 PF03023 Lipid II flippase MurJ LB4E_RS06745 PF02261 Aspartate decarboxylase LB4E_RS06765 PF08668 HDOD domain LB4E_RS06770 PF00005 ABC transporter LB4E_RS06780 PF00291 Pyridoxal-phosphate dependent enzyme LB4E_RS06795 PF00132 Bacterial transferase hexapeptide (six repeats) LB4E_RS06805 PF08446 PAS fold LB4E_RS06805 PF00512 His Kinase A (phospho-acceptor) domain LB4E_RS06805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS06805 PF01590 GAF domain LB4E_RS06805 PF00360 Phytochrome region LB4E_RS06810 PF01339 CheB methylesterase LB4E_RS06810 PF00072 Response regulator receiver domain LB4E_RS06815 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LB4E_RS06815 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LB4E_RS06825 PF00121 Triosephosphate isomerase LB4E_RS06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS06840 PF00512 His Kinase A (phospho-acceptor) domain LB4E_RS06840 PF00497 Bacterial extracellular solute-binding proteins, family 3 LB4E_RS06845 PF00072 Response regulator receiver domain LB4E_RS06845 PF12833 Helix-turn-helix domain LB4E_RS06860 PF01934 Protein of unknown function DUF86 LB4E_RS06885 PF00750 tRNA synthetases class I (R) LB4E_RS06885 PF05746 DALR anticodon binding domain LB4E_RS06885 PF03485 Arginyl tRNA synthetase N terminal domain LB4E_RS06900 PF02565 Recombination protein O C terminal LB4E_RS06900 PF11967 Recombination protein O N terminal LB4E_RS06905 PF02130 Uncharacterized protein family UPF0054 LB4E_RS06910 PF07698 7TM receptor with intracellular HD hydrolase LB4E_RS06910 PF07697 7TM-HD extracellular LB4E_RS06910 PF01966 HD domain LB4E_RS06915 PF02562 PhoH-like protein LB4E_RS06920 PF02938 GAD domain LB4E_RS06920 PF01336 OB-fold nucleic acid binding domain LB4E_RS06920 PF00152 tRNA synthetases class II (D, K and N) LB4E_RS06925 PF00772 DnaB-like helicase N terminal domain LB4E_RS06925 PF03796 DnaB-like helicase C terminal domain LB4E_RS06930 PF03948 Ribosomal protein L9, C-terminal domain LB4E_RS06930 PF01281 Ribosomal protein L9, N-terminal domain LB4E_RS06935 PF01084 Ribosomal protein S18 LB4E_RS06940 PF00436 Single-strand binding protein family LB4E_RS06945 PF01250 Ribosomal protein S6 LB4E_RS06950 PF09587 Bacterial capsule synthesis protein PGA_cap LB4E_RS06975 PF00939 Sodium:sulfate symporter transmembrane region LB4E_RS06995 PF00483 Nucleotidyl transferase LB4E_RS07000 PF16363 GDP-mannose 4,6 dehydratase LB4E_RS07005 PF04321 RmlD substrate binding domain LB4E_RS07010 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LB4E_RS07035 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LB4E_RS07040 PF05523 WxcM-like, C-terminal LB4E_RS07045 PF03407 Nucleotide-diphospho-sugar transferase LB4E_RS07070 PF02397 Bacterial sugar transferase LB4E_RS07075 PF00535 Glycosyl transferase family 2 LB4E_RS07085 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LB4E_RS07090 PF16363 GDP-mannose 4,6 dehydratase LB4E_RS07095 PF00483 Nucleotidyl transferase LB4E_RS07105 PF02780 Transketolase, C-terminal domain LB4E_RS07105 PF02779 Transketolase, pyrimidine binding domain LB4E_RS07110 PF00456 Transketolase, thiamine diphosphate binding domain LB4E_RS07120 PF12008 Type I restriction and modification enzyme - subunit R C terminal LB4E_RS07120 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LB4E_RS07120 PF18766 SWI2/SNF2 ATPase LB4E_RS07125 PF00271 Helicase conserved C-terminal domain LB4E_RS07125 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LB4E_RS07125 PF08463 EcoEI R protein C-terminal LB4E_RS07125 PF04851 Type III restriction enzyme, res subunit LB4E_RS07130 PF12161 HsdM N-terminal domain LB4E_RS07130 PF02384 N-6 DNA Methylase LB4E_RS07135 PF13784 Fic/DOC family N-terminal LB4E_RS07135 PF02661 Fic/DOC family LB4E_RS07155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LB4E_RS07155 PF02874 ATP synthase alpha/beta family, beta-barrel domain LB4E_RS07155 PF00306 ATP synthase alpha/beta chain, C terminal domain LB4E_RS07210 PF03781 Sulfatase-modifying factor enzyme 1 LB4E_RS07235 PF02491 SHS2 domain inserted in FTSA LB4E_RS07240 PF12327 FtsZ family, C-terminal domain LB4E_RS07240 PF00091 Tubulin/FtsZ family, GTPase domain LB4E_RS07260 PF02445 Quinolinate synthetase A protein LB4E_RS07270 PF02542 YgbB family LB4E_RS07310 PF02481 DNA recombination-mediator protein A LB4E_RS07335 PF06289 Flagellar and Swarming motility proteins LB4E_RS07340 PF01618 MotA/TolQ/ExbB proton channel family LB4E_RS07345 PF13677 Membrane MotB of proton-channel complex MotA/MotB LB4E_RS07345 PF00691 OmpA family LB4E_RS07355 PF02348 Cytidylyltransferase LB4E_RS07360 PF01740 STAS domain LB4E_RS07365 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LB4E_RS07365 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP LB4E_RS07395 PF00682 HMGL-like LB4E_RS07405 PF01695 IstB-like ATP binding protein LB4E_RS07410 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) LB4E_RS07415 PF02548 Ketopantoate hydroxymethyltransferase LB4E_RS07420 PF01817 Chorismate mutase type II LB4E_RS07420 PF00793 DAHP synthetase I family LB4E_RS07460 PF10672 S-adenosylmethionine-dependent methyltransferase LB4E_RS07465 PF00561 alpha/beta hydrolase fold LB4E_RS07490 PF00535 Glycosyl transferase family 2 LB4E_RS07510 PF01649 Ribosomal protein S20 LB4E_RS07520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LB4E_RS07520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LB4E_RS07520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LB4E_RS07520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LB4E_RS07525 PF01380 SIS domain LB4E_RS07530 PF00132 Bacterial transferase hexapeptide (six repeats) LB4E_RS07530 PF12804 MobA-like NTP transferase domain LB4E_RS07550 PF00909 Ammonium Transporter Family LB4E_RS07555 PF00543 Nitrogen regulatory protein P-II LB4E_RS07560 PF17827 PrmC N-terminal domain LB4E_RS07560 PF05175 Methyltransferase small domain LB4E_RS07575 PF13545 Crp-like helix-turn-helix domain LB4E_RS07575 PF00027 Cyclic nucleotide-binding domain LB4E_RS07590 PF05257 CHAP domain LB4E_RS07590 PF01476 LysM domain LB4E_RS07595 PF03144 Elongation factor Tu domain 2 LB4E_RS07595 PF00679 Elongation factor G C-terminus LB4E_RS07595 PF14492 Elongation Factor G, domain II LB4E_RS07595 PF03764 Elongation factor G, domain IV LB4E_RS07595 PF00009 Elongation factor Tu GTP binding domain LB4E_RS07600 PF02386 Cation transport protein LB4E_RS07620 PF00990 Diguanylate cyclase, GGDEF domain LB4E_RS07625 PF01565 FAD binding domain LB4E_RS07625 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LB4E_RS07650 PF02441 Flavoprotein LB4E_RS07650 PF04127 DNA / pantothenate metabolism flavoprotein LB4E_RS07655 PF04127 DNA / pantothenate metabolism flavoprotein LB4E_RS07655 PF02441 Flavoprotein LB4E_RS07710 PF01964 Radical SAM ThiC family LB4E_RS07715 PF00270 DEAD/DEAH box helicase LB4E_RS07715 PF17191 RecG wedge domain LB4E_RS07715 PF00271 Helicase conserved C-terminal domain LB4E_RS07735 PF16363 GDP-mannose 4,6 dehydratase LB4E_RS07740 PF00132 Bacterial transferase hexapeptide (six repeats) LB4E_RS07740 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LB4E_RS07750 PF16363 GDP-mannose 4,6 dehydratase LB4E_RS07780 PF00708 Acylphosphatase LB4E_RS07820 PF03717 Penicillin-binding Protein dimerisation domain LB4E_RS07820 PF00905 Penicillin binding protein transpeptidase domain LB4E_RS07825 PF01628 HrcA protein C terminal domain LB4E_RS07830 PF01025 GrpE LB4E_RS07840 PF00226 DnaJ domain LB4E_RS07840 PF01556 DnaJ C terminal domain LB4E_RS07840 PF00684 DnaJ central domain LB4E_RS07845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LB4E_RS07845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LB4E_RS07850 PF02622 Uncharacterized ACR, COG1678 LB4E_RS07870 PF00672 HAMP domain LB4E_RS07870 PF00211 Adenylate and Guanylate cyclase catalytic domain LB4E_RS07910 PF13649 Methyltransferase domain LB4E_RS07955 PF01895 PhoU domain LB4E_RS07970 PF01551 Peptidase family M23 LB4E_RS08000 PF00210 Ferritin-like domain LB4E_RS08005 PF00171 Aldehyde dehydrogenase family LB4E_RS08010 PF08668 HDOD domain LB4E_RS08050 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LB4E_RS08060 PF02875 Mur ligase family, glutamate ligase domain LB4E_RS08060 PF01225 Mur ligase family, catalytic domain LB4E_RS08060 PF08245 Mur ligase middle domain LB4E_RS08065 PF04101 Glycosyltransferase family 28 C-terminal domain LB4E_RS08065 PF03033 Glycosyltransferase family 28 N-terminal domain LB4E_RS08070 PF01098 Cell cycle protein LB4E_RS08075 PF00953 Glycosyl transferase family 4 LB4E_RS08075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LB4E_RS08080 PF08245 Mur ligase middle domain LB4E_RS08080 PF02875 Mur ligase family, glutamate ligase domain LB4E_RS08090 PF01795 MraW methylase family LB4E_RS08130 PF07669 Eco57I restriction-modification methylase LB4E_RS08140 PF03309 Type III pantothenate kinase LB4E_RS08145 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) LB4E_RS08150 PF13302 Acetyltransferase (GNAT) domain LB4E_RS08155 PF04754 Putative transposase, YhgA-like LB4E_RS08170 PF01047 MarR family LB4E_RS08175 PF01575 MaoC like domain LB4E_RS08185 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LB4E_RS08190 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LB4E_RS08195 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LB4E_RS08200 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LB4E_RS08210 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LB4E_RS08210 PF10531 SLBB domain LB4E_RS08210 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LB4E_RS08220 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LB4E_RS08225 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LB4E_RS08240 PF00361 Proton-conducting membrane transporter LB4E_RS08300 PF00561 alpha/beta hydrolase fold LB4E_RS08305 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LB4E_RS08305 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LB4E_RS08325 PF02110 Hydroxyethylthiazole kinase family LB4E_RS08330 PF03372 Endonuclease/Exonuclease/phosphatase family LB4E_RS08335 PF00472 RF-1 domain LB4E_RS08335 PF03462 PCRF domain LB4E_RS08345 PF02844 Phosphoribosylglycinamide synthetase, N domain LB4E_RS08345 PF02843 Phosphoribosylglycinamide synthetase, C domain LB4E_RS08345 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LB4E_RS08350 PF10458 Valyl tRNA synthetase tRNA binding arm LB4E_RS08350 PF00133 tRNA synthetases class I (I, L, M and V) LB4E_RS08350 PF08264 Anticodon-binding domain of tRNA LB4E_RS08375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LB4E_RS08375 PF00672 HAMP domain LB4E_RS08380 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LB4E_RS08380 PF00672 HAMP domain LB4E_RS08395 PF00696 Amino acid kinase family LB4E_RS08395 PF01842 ACT domain LB4E_RS08395 PF13840 ACT domain LB4E_RS08400 PF00474 Sodium:solute symporter family LB4E_RS08410 PF01709 Transcriptional regulator LB4E_RS08415 PF02075 Crossover junction endodeoxyribonuclease RuvC LB4E_RS08425 PF01641 SelR domain LB4E_RS08430 PF05406 WGR domain LB4E_RS08445 PF00108 Thiolase, N-terminal domain LB4E_RS08445 PF02803 Thiolase, C-terminal domain LB4E_RS08510 PF07715 TonB-dependent Receptor Plug Domain LB4E_RS08510 PF00593 TonB dependent receptor LB4E_RS08540 PF02515 CoA-transferase family III LB4E_RS08550 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LB4E_RS08550 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LB4E_RS08550 PF02770 Acyl-CoA dehydrogenase, middle domain LB4E_RS08560 PF03150 Di-haem cytochrome c peroxidase LB4E_RS08575 PF02803 Thiolase, C-terminal domain LB4E_RS08575 PF00108 Thiolase, N-terminal domain LB4E_RS08600 PF02537 CrcB-like protein, Camphor Resistance (CrcB) LB4E_RS08655 PF00962 Adenosine/AMP deaminase LB4E_RS08660 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LB4E_RS08665 PF00144 Beta-lactamase LB4E_RS08675 PF00989 PAS fold LB4E_RS08675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS08675 PF00512 His Kinase A (phospho-acceptor) domain LB4E_RS08680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS08680 PF00512 His Kinase A (phospho-acceptor) domain LB4E_RS08680 PF00989 PAS fold LB4E_RS08680 PF08447 PAS fold LB4E_RS08685 PF01636 Phosphotransferase enzyme family LB4E_RS08690 PF00483 Nucleotidyl transferase LB4E_RS08705 PF00342 Phosphoglucose isomerase LB4E_RS08715 PF08544 GHMP kinases C terminal LB4E_RS08715 PF10509 Galactokinase galactose-binding signature LB4E_RS08715 PF00288 GHMP kinases N terminal domain LB4E_RS08725 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LB4E_RS08745 PF01266 FAD dependent oxidoreductase LB4E_RS08750 PF07536 HWE histidine kinase LB4E_RS08750 PF08447 PAS fold LB4E_RS08750 PF13426 PAS domain LB4E_RS08775 PF02583 Metal-sensitive transcriptional repressor LB4E_RS08795 PF00484 Carbonic anhydrase LB4E_RS08820 PF09335 SNARE associated Golgi protein LB4E_RS08850 PF00580 UvrD/REP helicase N-terminal domain LB4E_RS08850 PF13361 UvrD-like helicase C-terminal domain LB4E_RS08870 PF00672 HAMP domain LB4E_RS08870 PF02743 Cache domain LB4E_RS08870 PF00211 Adenylate and Guanylate cyclase catalytic domain LB4E_RS08985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LB4E_RS08985 PF02770 Acyl-CoA dehydrogenase, middle domain LB4E_RS08985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LB4E_RS09030 PF01161 Phosphatidylethanolamine-binding protein LB4E_RS09045 PF00348 Polyprenyl synthetase LB4E_RS09050 PF01728 FtsJ-like methyltransferase LB4E_RS09050 PF01479 S4 domain LB4E_RS09055 PF01757 Acyltransferase family LB4E_RS09060 PF00572 Ribosomal protein L13 LB4E_RS09065 PF00380 Ribosomal protein S9/S16 LB4E_RS09075 PF04461 Protein of unknown function (DUF520) LB4E_RS09100 PF00675 Insulinase (Peptidase family M16) LB4E_RS09100 PF05193 Peptidase M16 inactive domain LB4E_RS09105 PF05193 Peptidase M16 inactive domain LB4E_RS09130 PF00034 Cytochrome c LB4E_RS09130 PF03150 Di-haem cytochrome c peroxidase LB4E_RS09145 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LB4E_RS09145 PF02743 Cache domain LB4E_RS09145 PF00672 HAMP domain LB4E_RS09170 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LB4E_RS09175 PF00467 KOW motif LB4E_RS09175 PF02357 Transcription termination factor nusG LB4E_RS09180 PF03946 Ribosomal protein L11, N-terminal domain LB4E_RS09180 PF00298 Ribosomal protein L11, RNA binding domain LB4E_RS09185 PF00687 Ribosomal protein L1p/L10e family LB4E_RS09190 PF00466 Ribosomal protein L10 LB4E_RS09195 PF16320 Ribosomal protein L7/L12 dimerisation domain LB4E_RS09195 PF00542 Ribosomal protein L7/L12 C-terminal domain LB4E_RS09205 PF10385 RNA polymerase beta subunit external 1 domain LB4E_RS09205 PF04563 RNA polymerase beta subunit LB4E_RS09205 PF00562 RNA polymerase Rpb2, domain 6 LB4E_RS09205 PF04560 RNA polymerase Rpb2, domain 7 LB4E_RS09205 PF04561 RNA polymerase Rpb2, domain 2 LB4E_RS09205 PF04565 RNA polymerase Rpb2, domain 3 LB4E_RS09215 PF04997 RNA polymerase Rpb1, domain 1 LB4E_RS09215 PF04998 RNA polymerase Rpb1, domain 5 LB4E_RS09215 PF05000 RNA polymerase Rpb1, domain 4 LB4E_RS09215 PF04983 RNA polymerase Rpb1, domain 3 LB4E_RS09215 PF00623 RNA polymerase Rpb1, domain 2 LB4E_RS09220 PF00164 Ribosomal protein S12/S23 LB4E_RS09225 PF00177 Ribosomal protein S7p/S5e LB4E_RS09245 PF01551 Peptidase family M23 LB4E_RS09245 PF01476 LysM domain LB4E_RS09245 PF08525 Opacity-associated protein A N-terminal motif LB4E_RS09275 PF00107 Zinc-binding dehydrogenase LB4E_RS09275 PF08240 Alcohol dehydrogenase GroES-like domain LB4E_RS09285 PF12792 CSS motif domain associated with EAL LB4E_RS09285 PF00563 EAL domain LB4E_RS09315 PF00588 SpoU rRNA Methylase family LB4E_RS09330 PF08668 HDOD domain LB4E_RS09335 PF00535 Glycosyl transferase family 2 LB4E_RS09360 PF00593 TonB dependent receptor LB4E_RS09360 PF07660 Secretin and TonB N terminus short domain LB4E_RS09360 PF07715 TonB-dependent Receptor Plug Domain LB4E_RS09375 PF00795 Carbon-nitrogen hydrolase LB4E_RS09375 PF00583 Acetyltransferase (GNAT) family LB4E_RS09380 PF01565 FAD binding domain LB4E_RS09380 PF02913 FAD linked oxidases, C-terminal domain LB4E_RS09385 PF02503 Polyphosphate kinase middle domain LB4E_RS09385 PF13089 Polyphosphate kinase N-terminal domain LB4E_RS09385 PF13090 Polyphosphate kinase C-terminal domain 2 LB4E_RS09385 PF17941 Polyphosphate kinase C-terminal domain 1 LB4E_RS09400 PF07238 PilZ domain LB4E_RS09400 PF00535 Glycosyl transferase family 2 LB4E_RS09400 PF03552 Cellulose synthase LB4E_RS09425 PF00528 Binding-protein-dependent transport system inner membrane component LB4E_RS09440 PF08245 Mur ligase middle domain LB4E_RS09445 PF18317 Shikimate 5'-dehydrogenase C-terminal domain LB4E_RS09445 PF08501 Shikimate dehydrogenase substrate binding domain LB4E_RS09490 PF00682 HMGL-like LB4E_RS09555 PF03190 Protein of unknown function, DUF255 LB4E_RS09615 PF00535 Glycosyl transferase family 2 LB4E_RS09645 PF17820 PDZ domain LB4E_RS09645 PF13180 PDZ domain LB4E_RS09655 PF01177 Asp/Glu/Hydantoin racemase LB4E_RS09665 PF02769 AIR synthase related protein, C-terminal domain LB4E_RS09665 PF00586 AIR synthase related protein, N-terminal domain LB4E_RS09670 PF05231 MASE1 LB4E_RS09670 PF13426 PAS domain LB4E_RS09670 PF08447 PAS fold LB4E_RS09670 PF08448 PAS fold LB4E_RS09670 PF00563 EAL domain LB4E_RS09670 PF00990 Diguanylate cyclase, GGDEF domain LB4E_RS09720 PF00570 HRDC domain LB4E_RS09720 PF01612 3'-5' exonuclease LB4E_RS09730 PF02684 Lipid-A-disaccharide synthetase LB4E_RS09755 PF00549 CoA-ligase LB4E_RS09755 PF02629 CoA binding domain LB4E_RS09760 PF08442 ATP-grasp domain LB4E_RS09760 PF00549 CoA-ligase LB4E_RS09765 PF00586 AIR synthase related protein, N-terminal domain LB4E_RS09765 PF02769 AIR synthase related protein, C-terminal domain LB4E_RS09765 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LB4E_RS09775 PF00133 tRNA synthetases class I (I, L, M and V) LB4E_RS09775 PF08264 Anticodon-binding domain of tRNA LB4E_RS09815 PF03109 ABC1 family LB4E_RS09820 PF01252 Signal peptidase (SPase) II LB4E_RS09830 PF01594 AI-2E family transporter LB4E_RS09850 PF01850 PIN domain LB4E_RS09855 PF00892 EamA-like transporter family LB4E_RS09860 PF01758 Sodium Bile acid symporter family LB4E_RS09900 PF00072 Response regulator receiver domain LB4E_RS09905 PF01590 GAF domain LB4E_RS09905 PF08446 PAS fold LB4E_RS09905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS09905 PF00512 His Kinase A (phospho-acceptor) domain LB4E_RS09905 PF00360 Phytochrome region LB4E_RS09915 PF09587 Bacterial capsule synthesis protein PGA_cap LB4E_RS09945 PF00593 TonB dependent receptor LB4E_RS09945 PF07715 TonB-dependent Receptor Plug Domain LB4E_RS09970 PF12728 Helix-turn-helix domain LB4E_RS09970 PF02661 Fic/DOC family LB4E_RS09990 PF00692 dUTPase LB4E_RS09995 PF03129 Anticodon binding domain LB4E_RS09995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LB4E_RS10015 PF00294 pfkB family carbohydrate kinase LB4E_RS10130 PF00155 Aminotransferase class I and II LB4E_RS10155 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LB4E_RS10190 PF00850 Histone deacetylase domain LB4E_RS10200 PF00378 Enoyl-CoA hydratase/isomerase LB4E_RS10230 PF12146 Serine aminopeptidase, S33 LB4E_RS10275 PF07715 TonB-dependent Receptor Plug Domain LB4E_RS10275 PF00593 TonB dependent receptor LB4E_RS10280 PF00211 Adenylate and Guanylate cyclase catalytic domain LB4E_RS10300 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LB4E_RS10300 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LB4E_RS10305 PF01144 Coenzyme A transferase LB4E_RS10330 PF02801 Beta-ketoacyl synthase, C-terminal domain LB4E_RS10330 PF00109 Beta-ketoacyl synthase, N-terminal domain LB4E_RS10340 PF16701 Adenylate cyclase regulatory domain LB4E_RS10340 PF00211 Adenylate and Guanylate cyclase catalytic domain LB4E_RS10345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS10345 PF00512 His Kinase A (phospho-acceptor) domain LB4E_RS10355 PF01230 HIT domain LB4E_RS10365 PF00005 ABC transporter LB4E_RS10380 PF13193 AMP-binding enzyme C-terminal domain LB4E_RS10380 PF00501 AMP-binding enzyme LB4E_RS10425 PF01375 Heat-labile enterotoxin alpha chain LB4E_RS10430 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LB4E_RS10430 PF09397 Ftsk gamma domain LB4E_RS10430 PF01580 FtsK/SpoIIIE family LB4E_RS10430 PF17854 FtsK alpha domain LB4E_RS10465 PF01066 CDP-alcohol phosphatidyltransferase LB4E_RS10470 PF02885 Glycosyl transferase family, helical bundle domain LB4E_RS10470 PF00591 Glycosyl transferase family, a/b domain LB4E_RS10475 PF02699 Preprotein translocase subunit LB4E_RS10495 PF01872 RibD C-terminal domain LB4E_RS10495 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LB4E_RS10500 PF00677 Lumazine binding domain LB4E_RS10505 PF00925 GTP cyclohydrolase II LB4E_RS10505 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LB4E_RS10515 PF00528 Binding-protein-dependent transport system inner membrane component LB4E_RS10520 PF00528 Binding-protein-dependent transport system inner membrane component LB4E_RS10525 PF12857 TOBE-like domain LB4E_RS10525 PF17850 CysA C-terminal regulatory domain LB4E_RS10525 PF00005 ABC transporter LB4E_RS10535 PF09995 Uncharacterized protein conserved in bacteria (DUF2236) LB4E_RS10570 PF01464 Transglycosylase SLT domain LB4E_RS10570 PF00497 Bacterial extracellular solute-binding proteins, family 3 LB4E_RS10590 PF01464 Transglycosylase SLT domain LB4E_RS10600 PF12706 Beta-lactamase superfamily domain LB4E_RS10640 PF03099 Biotin/lipoate A/B protein ligase family LB4E_RS10650 PF00464 Serine hydroxymethyltransferase LB4E_RS10665 PF00753 Metallo-beta-lactamase superfamily LB4E_RS10665 PF12706 Beta-lactamase superfamily domain LB4E_RS10670 PF17092 Penicillin-binding protein OB-like domain LB4E_RS10670 PF00905 Penicillin binding protein transpeptidase domain LB4E_RS10670 PF00912 Transglycosylase LB4E_RS10675 PF00364 Biotin-requiring enzyme LB4E_RS10675 PF02817 e3 binding domain LB4E_RS10675 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LB4E_RS10680 PF07992 Pyridine nucleotide-disulphide oxidoreductase LB4E_RS10680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LB4E_RS10685 PF16078 2-oxoglutarate dehydrogenase N-terminus LB4E_RS10685 PF00676 Dehydrogenase E1 component LB4E_RS10685 PF16870 2-oxoglutarate dehydrogenase C-terminal LB4E_RS10685 PF02779 Transketolase, pyrimidine binding domain LB4E_RS10710 PF00117 Glutamine amidotransferase class-I LB4E_RS10710 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LB4E_RS10720 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LB4E_RS10720 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LB4E_RS10720 PF03129 Anticodon binding domain LB4E_RS10725 PF00707 Translation initiation factor IF-3, C-terminal domain LB4E_RS10725 PF05198 Translation initiation factor IF-3, N-terminal domain LB4E_RS10730 PF01632 Ribosomal protein L35 LB4E_RS10735 PF00453 Ribosomal protein L20 LB4E_RS10745 PF05164 Cell division protein ZapA LB4E_RS10750 PF01812 5-formyltetrahydrofolate cyclo-ligase family LB4E_RS10755 PF01584 CheW-like domain LB4E_RS10760 PF02895 Signal transducing histidine kinase, homodimeric domain LB4E_RS10760 PF01584 CheW-like domain LB4E_RS10760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS10760 PF01627 Hpt domain LB4E_RS10760 PF07194 P2 response regulator binding domain LB4E_RS10765 PF01339 CheB methylesterase LB4E_RS10765 PF00072 Response regulator receiver domain LB4E_RS10770 PF00072 Response regulator receiver domain LB4E_RS10775 PF02616 Segregation and condensation protein ScpA LB4E_RS10780 PF04079 Segregation and condensation complex subunit ScpB LB4E_RS10790 PF01842 ACT domain LB4E_RS10790 PF02153 Prephenate dehydrogenase LB4E_RS10795 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LB4E_RS10800 PF02224 Cytidylate kinase LB4E_RS10805 PF00575 S1 RNA binding domain LB4E_RS10815 PF01634 ATP phosphoribosyltransferase LB4E_RS10825 PF01783 Ribosomal L32p protein family LB4E_RS10830 PF02504 Fatty acid synthesis protein LB4E_RS10840 PF01256 Carbohydrate kinase LB4E_RS10840 PF03853 YjeF-related protein N-terminus LB4E_RS10850 PF02576 RimP N-terminal domain LB4E_RS10860 PF04760 Translation initiation factor IF-2, N-terminal region LB4E_RS10860 PF11987 Translation-initiation factor 2 LB4E_RS10860 PF00009 Elongation factor Tu GTP binding domain LB4E_RS10865 PF02033 Ribosome-binding factor A LB4E_RS10870 PF01509 TruB family pseudouridylate synthase (N terminal domain) LB4E_RS10875 PF00312 Ribosomal protein S15 LB4E_RS10880 PF03725 3' exoribonuclease family, domain 2 LB4E_RS10880 PF00013 KH domain LB4E_RS10880 PF01138 3' exoribonuclease family, domain 1 LB4E_RS10880 PF00575 S1 RNA binding domain LB4E_RS10880 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LB4E_RS10885 PF00675 Insulinase (Peptidase family M16) LB4E_RS10885 PF05193 Peptidase M16 inactive domain LB4E_RS10905 PF04002 RadC-like JAB domain LB4E_RS10915 PF00005 ABC transporter LB4E_RS10920 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LB4E_RS10920 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LB4E_RS10920 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LB4E_RS10925 PF01613 Flavin reductase like domain LB4E_RS10930 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LB4E_RS10930 PF02222 ATP-grasp domain LB4E_RS10935 PF00731 AIR carboxylase LB4E_RS10990 PF03030 Inorganic H+ pyrophosphatase LB4E_RS11040 PF01168 Alanine racemase, N-terminal domain LB4E_RS11045 PF14748 Pyrroline-5-carboxylate reductase dimerisation LB4E_RS11045 PF03807 NADP oxidoreductase coenzyme F420-dependent LB4E_RS11050 PF01548 Transposase LB4E_RS11060 PF00072 Response regulator receiver domain LB4E_RS11060 PF00990 Diguanylate cyclase, GGDEF domain LB4E_RS11080 PF01070 FMN-dependent dehydrogenase LB4E_RS11090 PF00849 RNA pseudouridylate synthase LB4E_RS11090 PF01479 S4 domain LB4E_RS11095 PF03553 Na+/H+ antiporter family LB4E_RS11160 PF00072 Response regulator receiver domain LB4E_RS11165 PF00072 Response regulator receiver domain LB4E_RS11165 PF13426 PAS domain LB4E_RS11165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS11170 PF00563 EAL domain LB4E_RS11170 PF00990 Diguanylate cyclase, GGDEF domain LB4E_RS11170 PF13426 PAS domain LB4E_RS11205 PF00535 Glycosyl transferase family 2 LB4E_RS11235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LB4E_RS11235 PF00672 HAMP domain LB4E_RS11235 PF12729 Four helix bundle sensory module for signal transduction LB4E_RS11240 PF00578 AhpC/TSA family LB4E_RS11240 PF10417 C-terminal domain of 1-Cys peroxiredoxin LB4E_RS11245 PF01458 Uncharacterized protein family (UPF0051) LB4E_RS11260 PF00210 Ferritin-like domain LB4E_RS11265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LB4E_RS11265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LB4E_RS11270 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LB4E_RS11305 PF00005 ABC transporter LB4E_RS11320 PF00155 Aminotransferase class I and II LB4E_RS11335 PF01668 SmpB protein LB4E_RS11340 PF01926 50S ribosome-binding GTPase LB4E_RS11340 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LB4E_RS11345 PF02660 Glycerol-3-phosphate acyltransferase LB4E_RS11370 PF02463 RecF/RecN/SMC N terminal domain LB4E_RS11370 PF06470 SMC proteins Flexible Hinge Domain LB4E_RS11390 PF03951 Glutamine synthetase, beta-Grasp domain LB4E_RS11390 PF00120 Glutamine synthetase, catalytic domain LB4E_RS11405 PF00440 Bacterial regulatory proteins, tetR family LB4E_RS11405 PF16295 Tetracyclin repressor-like, C-terminal domain LB4E_RS11415 PF10502 Signal peptidase, peptidase S26 LB4E_RS11440 PF00119 ATP synthase A chain LB4E_RS11445 PF00137 ATP synthase subunit C LB4E_RS11450 PF00430 ATP synthase B/B' CF(0) LB4E_RS11455 PF00213 ATP synthase delta (OSCP) subunit LB4E_RS11460 PF02874 ATP synthase alpha/beta family, beta-barrel domain LB4E_RS11460 PF00306 ATP synthase alpha/beta chain, C terminal domain LB4E_RS11460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LB4E_RS11465 PF00231 ATP synthase LB4E_RS11470 PF02874 ATP synthase alpha/beta family, beta-barrel domain LB4E_RS11470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LB4E_RS11475 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LB4E_RS11495 PF03062 MBOAT, membrane-bound O-acyltransferase family LB4E_RS11525 PF02541 Ppx/GppA phosphatase family LB4E_RS11545 PF03717 Penicillin-binding Protein dimerisation domain LB4E_RS11545 PF00905 Penicillin binding protein transpeptidase domain LB4E_RS11550 PF01098 Cell cycle protein LB4E_RS11625 PF02082 Transcriptional regulator LB4E_RS11630 PF00211 Adenylate and Guanylate cyclase catalytic domain LB4E_RS11640 PF03060 Nitronate monooxygenase LB4E_RS11665 PF01416 tRNA pseudouridine synthase LB4E_RS11685 PF00289 Biotin carboxylase, N-terminal domain LB4E_RS11685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LB4E_RS11685 PF02785 Biotin carboxylase C-terminal domain LB4E_RS11720 PF02910 Fumarate reductase flavoprotein C-term LB4E_RS11720 PF00890 FAD binding domain LB4E_RS11725 PF03572 Peptidase family S41 LB4E_RS11725 PF13180 PDZ domain LB4E_RS11750 PF17209 Hfq protein LB4E_RS11760 PF00483 Nucleotidyl transferase LB4E_RS11760 PF01050 Mannose-6-phosphate isomerase LB4E_RS11770 PF01584 CheW-like domain LB4E_RS11795 PF00512 His Kinase A (phospho-acceptor) domain LB4E_RS11795 PF00989 PAS fold LB4E_RS11795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS11795 PF13188 PAS domain LB4E_RS11795 PF13426 PAS domain LB4E_RS11800 PF01791 DeoC/LacD family aldolase LB4E_RS11805 PF00291 Pyridoxal-phosphate dependent enzyme LB4E_RS11805 PF00571 CBS domain LB4E_RS11845 PF02630 SCO1/SenC LB4E_RS11860 PF00011 Hsp20/alpha crystallin family LB4E_RS11865 PF00011 Hsp20/alpha crystallin family LB4E_RS11890 PF01370 NAD dependent epimerase/dehydratase family LB4E_RS11900 PF13580 SIS domain LB4E_RS11935 PF02384 N-6 DNA Methylase LB4E_RS11935 PF12161 HsdM N-terminal domain LB4E_RS11940 PF01420 Type I restriction modification DNA specificity domain LB4E_RS11960 PF00324 Amino acid permease LB4E_RS11985 PF00128 Alpha amylase, catalytic domain LB4E_RS11985 PF16657 Maltogenic Amylase, C-terminal domain LB4E_RS11995 PF00578 AhpC/TSA family LB4E_RS12000 PF00883 Cytosol aminopeptidase family, catalytic domain LB4E_RS12005 PF07075 Protein of unknown function (DUF1343) LB4E_RS12095 PF05724 Thiopurine S-methyltransferase (TPMT) LB4E_RS12130 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase LB4E_RS12140 PF04055 Radical SAM superfamily LB4E_RS12155 PF00218 Indole-3-glycerol phosphate synthase LB4E_RS12165 PF08245 Mur ligase middle domain LB4E_RS12165 PF02875 Mur ligase family, glutamate ligase domain LB4E_RS12175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LB4E_RS12175 PF00460 Flagella basal body rod protein LB4E_RS12175 PF07559 Flagellar basal body protein FlaE LB4E_RS12180 PF03963 Flagellar hook capping protein - N-terminal region LB4E_RS12230 PF00884 Sulfatase LB4E_RS12260 PF00196 Bacterial regulatory proteins, luxR family LB4E_RS12260 PF00072 Response regulator receiver domain LB4E_RS12265 PF07730 Histidine kinase LB4E_RS12285 PF17864 RuvB AAA lid domain LB4E_RS12285 PF05496 Holliday junction DNA helicase RuvB P-loop domain LB4E_RS12285 PF05491 RuvB C-terminal winged helix domain LB4E_RS12290 PF17820 PDZ domain LB4E_RS12290 PF13180 PDZ domain LB4E_RS12295 PF13180 PDZ domain LB4E_RS12300 PF02223 Thymidylate kinase LB4E_RS12325 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LB4E_RS12350 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LB4E_RS12350 PF01464 Transglycosylase SLT domain LB4E_RS12355 PF00285 Citrate synthase, C-terminal domain LB4E_RS12380 PF01381 Helix-turn-helix LB4E_RS12410 PF01752 Collagenase LB4E_RS12410 PF08453 Peptidase family M9 N-terminal LB4E_RS12410 PF04151 Bacterial pre-peptidase C-terminal domain LB4E_RS12410 PF18496 Collagenase G catalytic helper subdomain LB4E_RS12465 PF04551 GcpE protein LB4E_RS12475 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LB4E_RS12475 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LB4E_RS12485 PF00155 Aminotransferase class I and II LB4E_RS12505 PF01197 Ribosomal protein L31 LB4E_RS12510 PF01592 NifU-like N terminal domain LB4E_RS12530 PF00672 HAMP domain LB4E_RS12530 PF00211 Adenylate and Guanylate cyclase catalytic domain LB4E_RS12565 PF01618 MotA/TolQ/ExbB proton channel family LB4E_RS12600 PF10520 B domain of TMEM189, localisation domain LB4E_RS12615 PF00211 Adenylate and Guanylate cyclase catalytic domain LB4E_RS12660 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LB4E_RS12665 PF01259 SAICAR synthetase LB4E_RS12670 PF00486 Transcriptional regulatory protein, C terminal LB4E_RS12670 PF00072 Response regulator receiver domain LB4E_RS12685 PF00005 ABC transporter LB4E_RS12700 PF09383 NIL domain LB4E_RS12700 PF00005 ABC transporter LB4E_RS12730 PF00270 DEAD/DEAH box helicase LB4E_RS12730 PF00271 Helicase conserved C-terminal domain LB4E_RS12735 PF17946 RecC C-terminal domain LB4E_RS12740 PF00580 UvrD/REP helicase N-terminal domain LB4E_RS12740 PF12705 PD-(D/E)XK nuclease superfamily LB4E_RS12740 PF13361 UvrD-like helicase C-terminal domain LB4E_RS12750 PF00005 ABC transporter LB4E_RS12775 PF00398 Ribosomal RNA adenine dimethylase LB4E_RS12780 PF08668 HDOD domain LB4E_RS12790 PF00005 ABC transporter LB4E_RS12820 PF00657 GDSL-like Lipase/Acylhydrolase LB4E_RS12820 PF00404 Dockerin type I domain LB4E_RS12830 PF01740 STAS domain LB4E_RS12860 PF00027 Cyclic nucleotide-binding domain LB4E_RS12860 PF13545 Crp-like helix-turn-helix domain LB4E_RS12865 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain LB4E_RS12865 PF00730 HhH-GPD superfamily base excision DNA repair protein LB4E_RS12900 PF05958 tRNA (Uracil-5-)-methyltransferase LB4E_RS12925 PF01121 Dephospho-CoA kinase LB4E_RS12965 PF01687 Riboflavin kinase LB4E_RS12965 PF06574 FAD synthetase LB4E_RS12985 PF07196 Flagellin hook IN motif LB4E_RS12985 PF02465 Flagellar hook-associated protein 2 N-terminus LB4E_RS12985 PF07195 Flagellar hook-associated protein 2 C-terminus LB4E_RS12990 PF00230 Major intrinsic protein LB4E_RS13020 PF00436 Single-strand binding protein family LB4E_RS13025 PF01502 Phosphoribosyl-AMP cyclohydrolase LB4E_RS13030 PF02618 YceG-like family LB4E_RS13040 PF00535 Glycosyl transferase family 2 LB4E_RS13045 PF16363 GDP-mannose 4,6 dehydratase LB4E_RS13050 PF00535 Glycosyl transferase family 2 LB4E_RS13060 PF00700 Bacterial flagellin C-terminal helical region LB4E_RS13060 PF00669 Bacterial flagellin N-terminal helical region LB4E_RS13070 PF01850 PIN domain LB4E_RS13115 PF01609 Transposase DDE domain LB4E_RS13160 PF01596 O-methyltransferase LB4E_RS13165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LB4E_RS13165 PF02770 Acyl-CoA dehydrogenase, middle domain LB4E_RS13165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LB4E_RS13175 PF01012 Electron transfer flavoprotein domain LB4E_RS13180 PF01012 Electron transfer flavoprotein domain LB4E_RS13180 PF00766 Electron transfer flavoprotein FAD-binding domain LB4E_RS13185 PF03548 Outer membrane lipoprotein carrier protein LolA LB4E_RS13195 PF00579 tRNA synthetases class I (W and Y) LB4E_RS13215 PF00005 ABC transporter LB4E_RS13215 PF16326 ABC transporter C-terminal domain LB4E_RS13215 PF12848 ABC transporter LB4E_RS13230 PF01758 Sodium Bile acid symporter family LB4E_RS13245 PF01883 Iron-sulfur cluster assembly protein LB4E_RS13250 PF01592 NifU-like N terminal domain LB4E_RS13255 PF00266 Aminotransferase class-V LB4E_RS13260 PF00355 Rieske [2Fe-2S] domain LB4E_RS13265 PF01458 Uncharacterized protein family (UPF0051) LB4E_RS13270 PF00005 ABC transporter LB4E_RS13305 PF09344 CT1975-like protein LB4E_RS13335 PF01867 CRISPR associated protein Cas1 LB4E_RS13360 PF00893 Small Multidrug Resistance protein LB4E_RS13390 PF00043 Glutathione S-transferase, C-terminal domain LB4E_RS13390 PF02798 Glutathione S-transferase, N-terminal domain LB4E_RS13395 PF08448 PAS fold LB4E_RS13395 PF08448 PAS fold LB4E_RS13395 PF08447 PAS fold LB4E_RS13395 PF08447 PAS fold LB4E_RS13395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS13395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS13435 PF01757 Acyltransferase family LB4E_RS13440 PF10282 Lactonase, 7-bladed beta-propeller LB4E_RS13460 PF02543 Carbamoyltransferase N-terminus LB4E_RS13460 PF16861 Carbamoyltransferase C-terminus LB4E_RS13475 PF01548 Transposase LB4E_RS13480 PF00378 Enoyl-CoA hydratase/isomerase LB4E_RS13495 PF01029 NusB family LB4E_RS13545 PF02657 Fe-S metabolism associated domain LB4E_RS13550 PF08240 Alcohol dehydrogenase GroES-like domain LB4E_RS13550 PF00107 Zinc-binding dehydrogenase LB4E_RS13570 PF00829 Ribosomal prokaryotic L21 protein LB4E_RS13580 PF01016 Ribosomal L27 protein LB4E_RS13585 PF01018 GTP1/OBG LB4E_RS13585 PF01926 50S ribosome-binding GTPase LB4E_RS13590 PF00696 Amino acid kinase family LB4E_RS13595 PF00171 Aldehyde dehydrogenase family LB4E_RS13600 PF01467 Cytidylyltransferase-like LB4E_RS13640 PF01975 Survival protein SurE LB4E_RS13680 PF00563 EAL domain LB4E_RS13680 PF12792 CSS motif domain associated with EAL LB4E_RS13690 PF07879 PHB/PHA accumulation regulator DNA-binding domain LB4E_RS13690 PF05233 PHB accumulation regulatory domain LB4E_RS13725 PF01588 Putative tRNA binding domain LB4E_RS13725 PF09334 tRNA synthetases class I (M) LB4E_RS13730 PF01966 HD domain LB4E_RS13730 PF08335 GlnD PII-uridylyltransferase LB4E_RS13765 PF03976 Polyphosphate kinase 2 (PPK2) LB4E_RS13795 PF01618 MotA/TolQ/ExbB proton channel family LB4E_RS13800 PF00753 Metallo-beta-lactamase superfamily LB4E_RS13805 PF03150 Di-haem cytochrome c peroxidase LB4E_RS13805 PF00034 Cytochrome c LB4E_RS13830 PF00285 Citrate synthase, C-terminal domain LB4E_RS13840 PF00005 ABC transporter LB4E_RS13860 PF08668 HDOD domain LB4E_RS13865 PF00291 Pyridoxal-phosphate dependent enzyme LB4E_RS13890 PF10502 Signal peptidase, peptidase S26 LB4E_RS13900 PF17938 Tetracyclin repressor-like, C-terminal domain LB4E_RS13900 PF00440 Bacterial regulatory proteins, tetR family LB4E_RS13940 PF00534 Glycosyl transferases group 1 LB4E_RS13945 PF01367 5'-3' exonuclease, C-terminal SAM fold LB4E_RS13945 PF00476 DNA polymerase family A LB4E_RS13945 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LB4E_RS13945 PF01612 3'-5' exonuclease LB4E_RS13985 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LB4E_RS14020 PF01042 Endoribonuclease L-PSP LB4E_RS14030 PF12300 ATP-dependent RNA helicase RhlB LB4E_RS14030 PF00271 Helicase conserved C-terminal domain LB4E_RS14030 PF00270 DEAD/DEAH box helicase LB4E_RS14070 PF08544 GHMP kinases C terminal LB4E_RS14080 PF00483 Nucleotidyl transferase LB4E_RS14080 PF00132 Bacterial transferase hexapeptide (six repeats) LB4E_RS14085 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LB4E_RS14085 PF14572 Phosphoribosyl synthetase-associated domain LB4E_RS14090 PF14693 Ribosomal protein TL5, C-terminal domain LB4E_RS14090 PF01386 Ribosomal L25p family LB4E_RS14095 PF01195 Peptidyl-tRNA hydrolase LB4E_RS14100 PF17862 AAA+ lid domain LB4E_RS14100 PF01434 Peptidase family M41 LB4E_RS14100 PF06480 FtsH Extracellular LB4E_RS14100 PF00004 ATPase family associated with various cellular activities (AAA) LB4E_RS14160 PF13722 5TM C-terminal transporter carbon starvation CstA LB4E_RS14160 PF02554 Carbon starvation protein CstA LB4E_RS14165 PF00684 DnaJ central domain LB4E_RS14165 PF01556 DnaJ C terminal domain LB4E_RS14165 PF00226 DnaJ domain LB4E_RS14180 PF00107 Zinc-binding dehydrogenase LB4E_RS14180 PF08240 Alcohol dehydrogenase GroES-like domain LB4E_RS14200 PF00255 Glutathione peroxidase LB4E_RS14210 PF00912 Transglycosylase LB4E_RS14210 PF00905 Penicillin binding protein transpeptidase domain LB4E_RS14235 PF00456 Transketolase, thiamine diphosphate binding domain LB4E_RS14240 PF13369 Transglutaminase-like superfamily LB4E_RS14245 PF00348 Polyprenyl synthetase LB4E_RS14280 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LB4E_RS14280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LB4E_RS14285 PF01196 Ribosomal protein L17 LB4E_RS14290 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LB4E_RS14290 PF01000 RNA polymerase Rpb3/RpoA insert domain LB4E_RS14290 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LB4E_RS14295 PF00163 Ribosomal protein S4/S9 N-terminal domain LB4E_RS14295 PF01479 S4 domain LB4E_RS14300 PF00411 Ribosomal protein S11 LB4E_RS14305 PF00416 Ribosomal protein S13/S18 LB4E_RS14310 PF01176 Translation initiation factor 1A / IF-1 LB4E_RS14320 PF00344 SecY translocase LB4E_RS14325 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LB4E_RS14330 PF00327 Ribosomal protein L30p/L7e LB4E_RS14340 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LB4E_RS14345 PF00347 Ribosomal protein L6 LB4E_RS14350 PF00410 Ribosomal protein S8 LB4E_RS14355 PF00281 Ribosomal protein L5 LB4E_RS14355 PF00673 ribosomal L5P family C-terminus LB4E_RS14360 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LB4E_RS14360 PF00467 KOW motif LB4E_RS14365 PF00238 Ribosomal protein L14p/L23e LB4E_RS14370 PF00366 Ribosomal protein S17 LB4E_RS14375 PF00831 Ribosomal L29 protein LB4E_RS14380 PF00252 Ribosomal protein L16p/L10e LB4E_RS14385 PF07650 KH domain LB4E_RS14385 PF00189 Ribosomal protein S3, C-terminal domain LB4E_RS14390 PF00237 Ribosomal protein L22p/L17e LB4E_RS14395 PF00203 Ribosomal protein S19 LB4E_RS14400 PF00181 Ribosomal Proteins L2, RNA binding domain LB4E_RS14400 PF03947 Ribosomal Proteins L2, C-terminal domain LB4E_RS14405 PF00276 Ribosomal protein L23 LB4E_RS14410 PF00573 Ribosomal protein L4/L1 family LB4E_RS14415 PF00297 Ribosomal protein L3 LB4E_RS14420 PF00338 Ribosomal protein S10p/S20e LB4E_RS14425 PF00009 Elongation factor Tu GTP binding domain LB4E_RS14425 PF03144 Elongation factor Tu domain 2 LB4E_RS14425 PF03143 Elongation factor Tu C-terminal domain LB4E_RS14430 PF00009 Elongation factor Tu GTP binding domain LB4E_RS14430 PF03144 Elongation factor Tu domain 2 LB4E_RS14430 PF00679 Elongation factor G C-terminus LB4E_RS14430 PF14492 Elongation Factor G, domain II LB4E_RS14430 PF03764 Elongation factor G, domain IV LB4E_RS14445 PF02678 Pirin LB4E_RS14445 PF05726 Pirin C-terminal cupin domain LB4E_RS14455 PF00072 Response regulator receiver domain LB4E_RS14455 PF00512 His Kinase A (phospho-acceptor) domain LB4E_RS14455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS14455 PF09308 LuxQ, periplasmic LB4E_RS14465 PF08534 Redoxin LB4E_RS14470 PF02769 AIR synthase related protein, C-terminal domain LB4E_RS14470 PF00586 AIR synthase related protein, N-terminal domain LB4E_RS14495 PF00664 ABC transporter transmembrane region LB4E_RS14495 PF00005 ABC transporter LB4E_RS14535 PF01548 Transposase LB4E_RS14545 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LB4E_RS14545 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LB4E_RS14560 PF13393 Histidyl-tRNA synthetase LB4E_RS14600 PF00817 impB/mucB/samB family LB4E_RS14600 PF11799 impB/mucB/samB family C-terminal domain LB4E_RS14600 PF11798 IMS family HHH motif LB4E_RS14630 PF13205 Bacterial Ig-like domain LB4E_RS14685 PF02770 Acyl-CoA dehydrogenase, middle domain LB4E_RS14685 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LB4E_RS14685 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LB4E_RS14695 PF01625 Peptide methionine sulfoxide reductase LB4E_RS14710 PF03167 Uracil DNA glycosylase superfamily LB4E_RS14730 PF01242 6-pyruvoyl tetrahydropterin synthase LB4E_RS14735 PF06508 Queuosine biosynthesis protein QueC LB4E_RS14740 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch LB4E_RS14745 PF02233 NAD(P) transhydrogenase beta subunit LB4E_RS14770 PF05406 WGR domain LB4E_RS14805 PF08669 Glycine cleavage T-protein C-terminal barrel domain LB4E_RS14805 PF01571 Aminomethyltransferase folate-binding domain LB4E_RS14810 PF01597 Glycine cleavage H-protein LB4E_RS14815 PF02347 Glycine cleavage system P-protein LB4E_RS14825 PF06865 Pyrimidine/purine nucleoside phosphorylase LB4E_RS14830 PF00486 Transcriptional regulatory protein, C terminal LB4E_RS14830 PF00072 Response regulator receiver domain LB4E_RS14835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS14835 PF00672 HAMP domain LB4E_RS14835 PF00989 PAS fold LB4E_RS14835 PF00512 His Kinase A (phospho-acceptor) domain LB4E_RS14875 PF04304 Protein of unknown function (DUF454) LB4E_RS14880 PF00753 Metallo-beta-lactamase superfamily LB4E_RS14880 PF17770 Ribonuclease J C-terminal domain LB4E_RS14880 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LB4E_RS14905 PF00460 Flagella basal body rod protein LB4E_RS14910 PF00460 Flagella basal body rod protein LB4E_RS14910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LB4E_RS14915 PF02049 Flagellar hook-basal body complex protein FliE LB4E_RS14935 PF02502 Ribose/Galactose Isomerase LB4E_RS14970 PF01676 Metalloenzyme superfamily LB4E_RS14970 PF06415 BPG-independent PGAM N-terminus (iPGM_N) LB4E_RS15005 PF02397 Bacterial sugar transferase LB4E_RS15050 PF01551 Peptidase family M23 LB4E_RS15055 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LB4E_RS15055 PF07733 Bacterial DNA polymerase III alpha NTPase domain LB4E_RS15055 PF14579 Helix-hairpin-helix motif LB4E_RS15055 PF02811 PHP domain LB4E_RS15055 PF01336 OB-fold nucleic acid binding domain LB4E_RS15065 PF13614 AAA domain LB4E_RS15085 PF01293 Phosphoenolpyruvate carboxykinase LB4E_RS15110 PF00510 Cytochrome c oxidase subunit III LB4E_RS15120 PF00116 Cytochrome C oxidase subunit II, periplasmic domain LB4E_RS15140 PF01040 UbiA prenyltransferase family LB4E_RS15145 PF00180 Isocitrate/isopropylmalate dehydrogenase LB4E_RS15145 PF18324 Hypothetical protein TT1725 LB4E_RS15155 PF00196 Bacterial regulatory proteins, luxR family LB4E_RS15155 PF00072 Response regulator receiver domain LB4E_RS15160 PF00512 His Kinase A (phospho-acceptor) domain LB4E_RS15160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LB4E_RS15175 PF05199 GMC oxidoreductase LB4E_RS15185 PF00155 Aminotransferase class I and II LB4E_RS15195 PF00691 OmpA family LB4E_RS15195 PF13677 Membrane MotB of proton-channel complex MotA/MotB LB4E_RS15230 PF03989 DNA gyrase C-terminal domain, beta-propeller LB4E_RS15230 PF00521 DNA gyrase/topoisomerase IV, subunit A LB4E_RS15260 PF01593 Flavin containing amine oxidoreductase LB4E_RS15285 PF02277 Phosphoribosyltransferase LB4E_RS15290 PF02654 Cobalamin-5-phosphate synthase LB4E_RS15300 PF00092 von Willebrand factor type A domain LB4E_RS15340 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LB4E_RS15340 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LB4E_RS15345 PF10414 Sirohaem synthase dimerisation region LB4E_RS15345 PF14824 Sirohaem biosynthesis protein central LB4E_RS15345 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LB4E_RS15350 PF14824 Sirohaem biosynthesis protein central LB4E_RS15350 PF10414 Sirohaem synthase dimerisation region LB4E_RS15350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LB4E_RS15355 PF00009 Elongation factor Tu GTP binding domain LB4E_RS15360 PF01507 Phosphoadenosine phosphosulfate reductase family LB4E_RS15365 PF01507 Phosphoadenosine phosphosulfate reductase family LB4E_RS15385 PF13505 Outer membrane protein beta-barrel domain LB4E_RS15385 PF00691 OmpA family LB4E_RS15405 PF01979 Amidohydrolase family LB4E_RS15415 PF01842 ACT domain LB4E_RS15415 PF03447 Homoserine dehydrogenase, NAD binding domain LB4E_RS15415 PF00742 Homoserine dehydrogenase LB4E_RS15425 PF16360 GTP-binding GTPase Middle Region LB4E_RS15425 PF01926 50S ribosome-binding GTPase LB4E_RS15425 PF13167 GTP-binding GTPase N-terminal LB4E_RS15440 PF00005 ABC transporter LB4E_RS15440 PF00664 ABC transporter transmembrane region LB4E_RS15445 PF00117 Glutamine amidotransferase class-I LB4E_RS15450 PF04715 Anthranilate synthase component I, N terminal region LB4E_RS15450 PF00425 chorismate binding enzyme LB4E_RS15455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LB4E_RS15455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain LB4E_RS15455 PF02770 Acyl-CoA dehydrogenase, middle domain LB4E_RS15465 PF02803 Thiolase, C-terminal domain LB4E_RS15465 PF00108 Thiolase, N-terminal domain LB4E_RS15475 PF01548 Transposase LB4E_RS15495 PF00149 Calcineurin-like phosphoesterase LB4E_RS15520 PF04542 Sigma-70 region 2 LB4E_RS15520 PF08281 Sigma-70, region 4 LB4E_RS15540 PF00691 OmpA family LB4E_RS15545 PF00005 ABC transporter LB4E_RS15545 PF12848 ABC transporter LB4E_RS15550 PF01725 Ham1 family LB4E_RS15600 PF01047 MarR family LB4E_RS15605 PF07681 DoxX LB4E_RS15640 PF00334 Nucleoside diphosphate kinase LB4E_RS15645 PF01467 Cytidylyltransferase-like LB4E_RS15650 PF00764 Arginosuccinate synthase LB4E_RS15670 PF00005 ABC transporter LB4E_RS15745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain LB4E_RS15745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain LB4E_RS15745 PF00378 Enoyl-CoA hydratase/isomerase LB4E_RS15765 PF00528 Binding-protein-dependent transport system inner membrane component LB4E_RS15775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LB4E_RS15775 PF00005 ABC transporter LB4E_RS15820 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LB4E_RS15820 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LB4E_RS15830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LB4E_RS15830 PF00672 HAMP domain LB4E_RS15830 PF02743 Cache domain LB4E_RS15840 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LB4E_RS15840 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LB4E_RS15845 PF00704 Glycosyl hydrolases family 18 LB4E_RS15845 PF01476 LysM domain LB4E_RS15870 PF01180 Dihydroorotate dehydrogenase LB4E_RS15905 PF02254 TrkA-N domain LB4E_RS15905 PF00999 Sodium/hydrogen exchanger family LB4E_RS15925 PF01227 GTP cyclohydrolase I LB4E_RS15950 PF12838 4Fe-4S dicluster domain LB4E_RS15955 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LB4E_RS16000 PF02222 ATP-grasp domain LB4E_RS16020 PF01370 NAD dependent epimerase/dehydratase family LB4E_RS16025 PF01047 MarR family LB4E_RS16030 PF00255 Glutathione peroxidase LB4E_RS16035 PF01965 DJ-1/PfpI family LB4E_RS16055 PF02599 Global regulator protein family LB4E_RS16060 PF02623 FliW protein LB4E_RS16070 PF07196 Flagellin hook IN motif LB4E_RS16070 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LB4E_RS16135 PF04241 Protein of unknown function (DUF423) LB4E_RS16165 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LB4E_RS16165 PF00132 Bacterial transferase hexapeptide (six repeats) LB4E_RS16180 PF14437 MafB19-like deaminase LB4E_RS16195 PF02575 YbaB/EbfC DNA-binding family LB4E_RS16200 PF02132 RecR protein LB4E_RS16200 PF13662 Toprim domain LB4E_RS16210 PF00497 Bacterial extracellular solute-binding proteins, family 3 LB4E_RS16210 PF01464 Transglycosylase SLT domain LB4E_RS16225 PF01026 TatD related DNase LB4E_RS16265 PF13614 AAA domain LB4E_RS16275 PF01546 Peptidase family M20/M25/M40 LB4E_RS16275 PF07687 Peptidase dimerisation domain LB4E_RS16290 PF01134 Glucose inhibited division protein A LB4E_RS16290 PF13932 GidA associated domain LB4E_RS16295 PF01063 Amino-transferase class IV LB4E_RS16500 PF08206 Ribonuclease B OB domain LB4E_RS16500 PF17876 Cold shock domain LB4E_RS16500 PF00773 RNB domain LB4E_RS16500 PF00575 S1 RNA binding domain LB4E_RS17255 PF00156 Phosphoribosyl transferase domain LB4E_RS17355 PF03641 Possible lysine decarboxylase LB4E_RS17400 PF00271 Helicase conserved C-terminal domain LB4E_RS17400 PF00270 DEAD/DEAH box helicase LB4E_RS17660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain LB4E_RS17660 PF02770 Acyl-CoA dehydrogenase, middle domain LB4E_RS17660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain