locus-tag class description LFE_RS00005 PF11638 DnaA N-terminal domain LFE_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LFE_RS00005 PF00308 Bacterial dnaA protein LFE_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LFE_RS00010 PF02767 DNA polymerase III beta subunit, central domain LFE_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LFE_RS00015 PF01751 Toprim domain LFE_RS00015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS00015 PF18053 DNA gyrase B subunit insert domain LFE_RS00015 PF00986 DNA gyrase B subunit, carboxyl terminus LFE_RS00015 PF00204 DNA gyrase B LFE_RS00020 PF00521 DNA gyrase/topoisomerase IV, subunit A LFE_RS00020 PF03989 DNA gyrase C-terminal domain, beta-propeller LFE_RS00030 PF04055 Radical SAM superfamily LFE_RS00035 PF06508 Queuosine biosynthesis protein QueC LFE_RS00040 PF02789 Cytosol aminopeptidase family, N-terminal domain LFE_RS00040 PF00883 Cytosol aminopeptidase family, catalytic domain LFE_RS00045 PF01668 SmpB protein LFE_RS00120 PF00563 EAL domain LFE_RS00120 PF08668 HDOD domain LFE_RS00125 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFE_RS00125 PF00672 HAMP domain LFE_RS00125 PF12729 Four helix bundle sensory module for signal transduction LFE_RS00135 PF03707 Bacterial signalling protein N terminal repeat LFE_RS00135 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS00135 PF00563 EAL domain LFE_RS00140 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS00140 PF00563 EAL domain LFE_RS00140 PF05231 MASE1 LFE_RS00140 PF08448 PAS fold LFE_RS00140 PF13426 PAS domain LFE_RS00140 PF08447 PAS fold LFE_RS00150 PF02547 Queuosine biosynthesis protein LFE_RS00165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS00165 PF00672 HAMP domain LFE_RS00165 PF00512 His Kinase A (phospho-acceptor) domain LFE_RS00165 PF00989 PAS fold LFE_RS00170 PF00072 Response regulator receiver domain LFE_RS00170 PF00158 Sigma-54 interaction domain LFE_RS00170 PF02954 Bacterial regulatory protein, Fis family LFE_RS00175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LFE_RS00175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LFE_RS00180 PF13525 Outer membrane lipoprotein LFE_RS00200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LFE_RS00200 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFE_RS00205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFE_RS00210 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LFE_RS00210 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LFE_RS00215 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LFE_RS00220 PF01515 Phosphate acetyl/butaryl transferase LFE_RS00225 PF00121 Triosephosphate isomerase LFE_RS00235 PF00156 Phosphoribosyl transferase domain LFE_RS00240 PF00905 Penicillin binding protein transpeptidase domain LFE_RS00240 PF17092 Penicillin-binding protein OB-like domain LFE_RS00240 PF00912 Transglycosylase LFE_RS00245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LFE_RS00245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LFE_RS00250 PF00162 Phosphoglycerate kinase LFE_RS00255 PF03840 Preprotein translocase SecG subunit LFE_RS00265 PF00528 Binding-protein-dependent transport system inner membrane component LFE_RS00270 PF00528 Binding-protein-dependent transport system inner membrane component LFE_RS00270 PF12911 N-terminal TM domain of oligopeptide transport permease C LFE_RS00275 PF13419 Haloacid dehalogenase-like hydrolase LFE_RS00295 PF00119 ATP synthase A chain LFE_RS00300 PF00137 ATP synthase subunit C LFE_RS00305 PF00430 ATP synthase B/B' CF(0) LFE_RS00310 PF00213 ATP synthase delta (OSCP) subunit LFE_RS00315 PF00306 ATP synthase alpha/beta chain, C terminal domain LFE_RS00315 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFE_RS00315 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFE_RS00320 PF00231 ATP synthase LFE_RS00325 PF02874 ATP synthase alpha/beta family, beta-barrel domain LFE_RS00325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFE_RS00330 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LFE_RS00330 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LFE_RS00335 PF00753 Metallo-beta-lactamase superfamily LFE_RS00355 PF00872 Transposase, Mutator family LFE_RS00420 PF08281 Sigma-70, region 4 LFE_RS00420 PF04542 Sigma-70 region 2 LFE_RS00425 PF00072 Response regulator receiver domain LFE_RS00425 PF00486 Transcriptional regulatory protein, C terminal LFE_RS00430 PF00672 HAMP domain LFE_RS00430 PF00512 His Kinase A (phospho-acceptor) domain LFE_RS00430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS00445 PF01451 Low molecular weight phosphotyrosine protein phosphatase LFE_RS00450 PF06953 Arsenical resistance operon trans-acting repressor ArsD LFE_RS00455 PF02374 Anion-transporting ATPase LFE_RS00470 PF02801 Beta-ketoacyl synthase, C-terminal domain LFE_RS00470 PF14765 Polyketide synthase dehydratase LFE_RS00470 PF08240 Alcohol dehydrogenase GroES-like domain LFE_RS00470 PF08990 Erythronolide synthase docking LFE_RS00470 PF16197 Ketoacyl-synthetase C-terminal extension LFE_RS00470 PF08659 KR domain LFE_RS00470 PF00698 Acyl transferase domain LFE_RS00470 PF00109 Beta-ketoacyl synthase, N-terminal domain LFE_RS00470 PF00550 Phosphopantetheine attachment site LFE_RS00475 PF02646 RmuC family LFE_RS00480 PF02080 TrkA-C domain LFE_RS00480 PF00999 Sodium/hydrogen exchanger family LFE_RS00480 PF03471 Transporter associated domain LFE_RS00485 PF02583 Metal-sensitive transcriptional repressor LFE_RS00510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFE_RS00515 PF16177 Acetyl-coenzyme A synthetase N-terminus LFE_RS00515 PF13193 AMP-binding enzyme C-terminal domain LFE_RS00515 PF00501 AMP-binding enzyme LFE_RS00525 PF05690 Thiazole biosynthesis protein ThiG LFE_RS00530 PF02581 Thiamine monophosphate synthase LFE_RS00550 PF04851 Type III restriction enzyme, res subunit LFE_RS00550 PF00271 Helicase conserved C-terminal domain LFE_RS00555 PF03167 Uracil DNA glycosylase superfamily LFE_RS00560 PF03129 Anticodon binding domain LFE_RS00560 PF02824 TGS domain LFE_RS00560 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFE_RS00560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LFE_RS00565 PF00707 Translation initiation factor IF-3, C-terminal domain LFE_RS00565 PF05198 Translation initiation factor IF-3, N-terminal domain LFE_RS00570 PF01632 Ribosomal protein L35 LFE_RS00575 PF00453 Ribosomal protein L20 LFE_RS00580 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain LFE_RS00580 PF18262 Phe-tRNA synthetase beta subunit B1 domain LFE_RS00580 PF03484 tRNA synthetase B5 domain LFE_RS00585 PF01409 tRNA synthetases class II core domain (F) LFE_RS00590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFE_RS00590 PF00005 ABC transporter LFE_RS00595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LFE_RS00595 PF00005 ABC transporter LFE_RS00600 PF01242 6-pyruvoyl tetrahydropterin synthase LFE_RS00620 PF01475 Ferric uptake regulator family LFE_RS00640 PF00270 DEAD/DEAH box helicase LFE_RS00640 PF13749 Putative ATP-dependent DNA helicase recG C-terminal LFE_RS00640 PF17191 RecG wedge domain LFE_RS00655 PF13333 Integrase core domain LFE_RS00655 PF00665 Integrase core domain LFE_RS00655 PF13276 HTH-like domain LFE_RS00680 PF01381 Helix-turn-helix LFE_RS00685 PF05973 Phage derived protein Gp49-like (DUF891) LFE_RS00710 PF05973 Phage derived protein Gp49-like (DUF891) LFE_RS00715 PF01381 Helix-turn-helix LFE_RS00720 PF06719 AraC-type transcriptional regulator N-terminus LFE_RS00720 PF12833 Helix-turn-helix domain LFE_RS00725 PF00248 Aldo/keto reductase family LFE_RS00730 PF08240 Alcohol dehydrogenase GroES-like domain LFE_RS00730 PF00107 Zinc-binding dehydrogenase LFE_RS00750 PF00083 Sugar (and other) transporter LFE_RS00750 PF07690 Major Facilitator Superfamily LFE_RS00795 PF12848 ABC transporter LFE_RS00795 PF00005 ABC transporter LFE_RS00810 PF00403 Heavy-metal-associated domain LFE_RS00810 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFE_RS00810 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFE_RS00815 PF13411 MerR HTH family regulatory protein LFE_RS00830 PF00149 Calcineurin-like phosphoesterase LFE_RS00835 PF13514 AAA domain LFE_RS00840 PF00875 DNA photolyase LFE_RS00840 PF03441 FAD binding domain of DNA photolyase LFE_RS00860 PF01871 AMMECR1 LFE_RS00865 PF01875 Memo-like protein LFE_RS00885 PF00342 Phosphoglucose isomerase LFE_RS00890 PF00829 Ribosomal prokaryotic L21 protein LFE_RS00895 PF01016 Ribosomal L27 protein LFE_RS00900 PF01926 50S ribosome-binding GTPase LFE_RS00900 PF01018 GTP1/OBG LFE_RS00905 PF01472 PUA domain LFE_RS00905 PF00696 Amino acid kinase family LFE_RS00910 PF00171 Aldehyde dehydrogenase family LFE_RS00915 PF01467 Cytidylyltransferase-like LFE_RS00935 PF06733 DEAD_2 LFE_RS00935 PF13307 Helicase C-terminal domain LFE_RS00945 PF01027 Inhibitor of apoptosis-promoting Bax1 LFE_RS00950 PF01063 Amino-transferase class IV LFE_RS00955 PF00476 DNA polymerase family A LFE_RS00955 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LFE_RS00955 PF01367 5'-3' exonuclease, C-terminal SAM fold LFE_RS00970 PF01121 Dephospho-CoA kinase LFE_RS00975 PF00483 Nucleotidyl transferase LFE_RS00980 PF02769 AIR synthase related protein, C-terminal domain LFE_RS00980 PF00586 AIR synthase related protein, N-terminal domain LFE_RS00990 PF01389 OmpA-like transmembrane domain LFE_RS00990 PF00691 OmpA family LFE_RS00995 PF00691 OmpA family LFE_RS01010 PF17876 Cold shock domain LFE_RS01010 PF00773 RNB domain LFE_RS01010 PF00575 S1 RNA binding domain LFE_RS01010 PF08206 Ribonuclease B OB domain LFE_RS01045 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFE_RS01045 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFE_RS01075 PF02885 Glycosyl transferase family, helical bundle domain LFE_RS01075 PF00591 Glycosyl transferase family, a/b domain LFE_RS01080 PF03819 MazG nucleotide pyrophosphohydrolase domain LFE_RS01085 PF06505 Activator of aromatic catabolism LFE_RS01085 PF02830 V4R domain LFE_RS01085 PF00158 Sigma-54 interaction domain LFE_RS01085 PF02954 Bacterial regulatory protein, Fis family LFE_RS01095 PF14437 MafB19-like deaminase LFE_RS01115 PF12794 Mechanosensitive ion channel inner membrane domain 1 LFE_RS01115 PF00924 Mechanosensitive ion channel LFE_RS01115 PF12795 Mechanosensitive ion channel porin domain LFE_RS01125 PF03144 Elongation factor Tu domain 2 LFE_RS01125 PF16658 Class II release factor RF3, C-terminal domain LFE_RS01125 PF00009 Elongation factor Tu GTP binding domain LFE_RS01130 PF13662 Toprim domain LFE_RS01130 PF02132 RecR protein LFE_RS01135 PF02575 YbaB/EbfC DNA-binding family LFE_RS01140 PF12170 DNA polymerase III tau subunit V interacting with alpha LFE_RS01140 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding LFE_RS01140 PF12169 DNA polymerase III subunits gamma and tau domain III LFE_RS01205 PF00873 AcrB/AcrD/AcrF family LFE_RS01210 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase LFE_RS01215 PF01258 Prokaryotic dksA/traR C4-type zinc finger LFE_RS01220 PF00106 short chain dehydrogenase LFE_RS01230 PF01678 Diaminopimelate epimerase LFE_RS01260 PF00581 Rhodanese-like domain LFE_RS01275 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 LFE_RS01280 PF04055 Radical SAM superfamily LFE_RS01285 PF08669 Glycine cleavage T-protein C-terminal barrel domain LFE_RS01285 PF01571 Aminomethyltransferase folate-binding domain LFE_RS01290 PF01597 Glycine cleavage H-protein LFE_RS01295 PF02347 Glycine cleavage system P-protein LFE_RS01300 PF02347 Glycine cleavage system P-protein LFE_RS01305 PF03099 Biotin/lipoate A/B protein ligase family LFE_RS01325 PF08331 Domain of unknown function (DUF1730) LFE_RS01330 PF02954 Bacterial regulatory protein, Fis family LFE_RS01330 PF00158 Sigma-54 interaction domain LFE_RS01330 PF06490 Flagellar regulatory protein FleQ LFE_RS01340 PF00512 His Kinase A (phospho-acceptor) domain LFE_RS01340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS01340 PF00989 PAS fold LFE_RS01345 PF00072 Response regulator receiver domain LFE_RS01345 PF00158 Sigma-54 interaction domain LFE_RS01345 PF02954 Bacterial regulatory protein, Fis family LFE_RS01350 PF00460 Flagella basal body rod protein LFE_RS01355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFE_RS01355 PF00460 Flagella basal body rod protein LFE_RS01360 PF02049 Flagellar hook-basal body complex protein FliE LFE_RS01365 PF08345 Flagellar M-ring protein C-terminal LFE_RS01365 PF01514 Secretory protein of YscJ/FliF family LFE_RS01370 PF14841 FliG middle domain LFE_RS01370 PF14842 FliG N-terminal domain LFE_RS01370 PF01706 FliG C-terminal domain LFE_RS01380 PF18269 T3SS EscN ATPase C-terminal domain LFE_RS01380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFE_RS01405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFE_RS01405 PF00460 Flagella basal body rod protein LFE_RS01405 PF07559 Flagellar basal body protein FlaE LFE_RS01415 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LFE_RS01425 PF00813 FliP family LFE_RS01430 PF01313 Bacterial export proteins, family 3 LFE_RS01435 PF01311 Bacterial export proteins, family 1 LFE_RS01440 PF01312 FlhB HrpN YscU SpaS Family LFE_RS01445 PF00771 FHIPEP family LFE_RS01450 PF00448 SRP54-type protein, GTPase domain LFE_RS01450 PF00448 SRP54-type protein, GTPase domain LFE_RS01455 PF10609 NUBPL iron-transfer P-loop NTPase LFE_RS01460 PF04545 Sigma-70, region 4 LFE_RS01460 PF04539 Sigma-70 region 3 LFE_RS01460 PF04542 Sigma-70 region 2 LFE_RS01465 PF00072 Response regulator receiver domain LFE_RS01470 PF02895 Signal transducing histidine kinase, homodimeric domain LFE_RS01470 PF01584 CheW-like domain LFE_RS01470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS01470 PF01627 Hpt domain LFE_RS01470 PF00072 Response regulator receiver domain LFE_RS01475 PF00672 HAMP domain LFE_RS01475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFE_RS01475 PF17200 Single Cache domain 2 LFE_RS01480 PF01584 CheW-like domain LFE_RS01485 PF01618 MotA/TolQ/ExbB proton channel family LFE_RS01490 PF00691 OmpA family LFE_RS01490 PF13677 Membrane MotB of proton-channel complex MotA/MotB LFE_RS01510 PF01312 FlhB HrpN YscU SpaS Family LFE_RS01525 PF00155 Aminotransferase class I and II LFE_RS01565 PF00005 ABC transporter LFE_RS01580 PF17782 DprA winged helix domain LFE_RS01580 PF02481 DNA recombination-mediator protein A LFE_RS01585 PF01396 Topoisomerase DNA binding C4 zinc finger LFE_RS01585 PF01751 Toprim domain LFE_RS01585 PF01131 DNA topoisomerase LFE_RS01590 PF01134 Glucose inhibited division protein A LFE_RS01595 PF00589 Phage integrase family LFE_RS01595 PF02899 Phage integrase, N-terminal SAM-like domain LFE_RS01600 PF00696 Amino acid kinase family LFE_RS01610 PF00692 dUTPase LFE_RS01615 PF01966 HD domain LFE_RS01615 PF11871 Domain of unknown function (DUF3391) LFE_RS01625 PF00873 AcrB/AcrD/AcrF family LFE_RS01630 PF02569 Pantoate-beta-alanine ligase LFE_RS01640 PF13784 Fic/DOC family N-terminal LFE_RS01640 PF02661 Fic/DOC family LFE_RS01665 PF02472 Biopolymer transport protein ExbD/TolR LFE_RS01670 PF01618 MotA/TolQ/ExbB proton channel family LFE_RS01680 PF00486 Transcriptional regulatory protein, C terminal LFE_RS01680 PF00072 Response regulator receiver domain LFE_RS01690 PF01695 IstB-like ATP binding protein LFE_RS01695 PF00665 Integrase core domain LFE_RS01720 PF03601 Conserved hypothetical protein 698 LFE_RS01730 PF00873 AcrB/AcrD/AcrF family LFE_RS01735 PF04261 Dyp-type peroxidase family LFE_RS01740 PF03707 Bacterial signalling protein N terminal repeat LFE_RS01740 PF00563 EAL domain LFE_RS01740 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS01755 PF02384 N-6 DNA Methylase LFE_RS01815 PF18766 SWI2/SNF2 ATPase LFE_RS01815 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LFE_RS01815 PF11867 Domain of unknown function (DUF3387) LFE_RS01855 PF03432 Relaxase/Mobilisation nuclease domain LFE_RS01870 PF18818 Metallopeptidase superfamily domain LFE_RS01870 PF13362 Toprim domain LFE_RS01870 PF08401 Domain of unknown function (DUF1738) LFE_RS01880 PF00589 Phage integrase family LFE_RS01890 PF01966 HD domain LFE_RS01890 PF11871 Domain of unknown function (DUF3391) LFE_RS01905 PF00175 Oxidoreductase NAD-binding domain LFE_RS01905 PF00111 2Fe-2S iron-sulfur cluster binding domain LFE_RS01905 PF00970 Oxidoreductase FAD-binding domain LFE_RS01910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFE_RS01915 PF00795 Carbon-nitrogen hydrolase LFE_RS01935 PF02568 Thiamine biosynthesis protein (ThiI) LFE_RS01935 PF02926 THUMP domain LFE_RS01940 PF03992 Antibiotic biosynthesis monooxygenase LFE_RS01945 PF17864 RuvB AAA lid domain LFE_RS01945 PF05491 RuvB C-terminal winged helix domain LFE_RS01945 PF05496 Holliday junction DNA helicase RuvB P-loop domain LFE_RS01950 PF01330 RuvA N terminal domain LFE_RS01955 PF02075 Crossover junction endodeoxyribonuclease RuvC LFE_RS01960 PF13180 PDZ domain LFE_RS01965 PF00072 Response regulator receiver domain LFE_RS01965 PF00196 Bacterial regulatory proteins, luxR family LFE_RS01970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS01970 PF00512 His Kinase A (phospho-acceptor) domain LFE_RS01970 PF00989 PAS fold LFE_RS01975 PF00132 Bacterial transferase hexapeptide (six repeats) LFE_RS01980 PF13419 Haloacid dehalogenase-like hydrolase LFE_RS02015 PF12911 N-terminal TM domain of oligopeptide transport permease C LFE_RS02015 PF00528 Binding-protein-dependent transport system inner membrane component LFE_RS02020 PF00528 Binding-protein-dependent transport system inner membrane component LFE_RS02030 PF01053 Cys/Met metabolism PLP-dependent enzyme LFE_RS02040 PF00909 Ammonium Transporter Family LFE_RS02045 PF00543 Nitrogen regulatory protein P-II LFE_RS02050 PF00403 Heavy-metal-associated domain LFE_RS02070 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFE_RS02075 PF01292 Prokaryotic cytochrome b561 LFE_RS02095 PF00085 Thioredoxin LFE_RS02095 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFE_RS02100 PF11838 ERAP1-like C-terminal domain LFE_RS02100 PF01433 Peptidase family M1 domain LFE_RS02110 PF02694 Uncharacterised BCR, YnfA/UPF0060 family LFE_RS02115 PF12344 Ultra-violet resistance protein B LFE_RS02115 PF02151 UvrB/uvrC motif LFE_RS02115 PF04851 Type III restriction enzyme, res subunit LFE_RS02115 PF00271 Helicase conserved C-terminal domain LFE_RS02115 PF17757 UvrB interaction domain LFE_RS02125 PF08446 PAS fold LFE_RS02125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS02125 PF00360 Phytochrome region LFE_RS02125 PF01590 GAF domain LFE_RS02125 PF00512 His Kinase A (phospho-acceptor) domain LFE_RS02130 PF00072 Response regulator receiver domain LFE_RS02135 PF03707 Bacterial signalling protein N terminal repeat LFE_RS02135 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS02135 PF00563 EAL domain LFE_RS02140 PF01022 Bacterial regulatory protein, arsR family LFE_RS02155 PF00873 AcrB/AcrD/AcrF family LFE_RS02165 PF08240 Alcohol dehydrogenase GroES-like domain LFE_RS02190 PF00578 AhpC/TSA family LFE_RS02260 PF02673 Bacitracin resistance protein BacA LFE_RS02265 PF03477 ATP cone domain LFE_RS02265 PF02867 Ribonucleotide reductase, barrel domain LFE_RS02265 PF00317 Ribonucleotide reductase, all-alpha domain LFE_RS02270 PF02915 Rubrerythrin LFE_RS02310 PF00672 HAMP domain LFE_RS02310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFE_RS02310 PF02743 Cache domain LFE_RS02315 PF03707 Bacterial signalling protein N terminal repeat LFE_RS02315 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS02315 PF00563 EAL domain LFE_RS02325 PF01171 PP-loop family LFE_RS02345 PF03023 Lipid II flippase MurJ LFE_RS02350 PF01649 Ribosomal protein S20 LFE_RS02365 PF09334 tRNA synthetases class I (M) LFE_RS02365 PF00133 tRNA synthetases class I (I, L, M and V) LFE_RS02365 PF08264 Anticodon-binding domain of tRNA LFE_RS02365 PF13603 Leucyl-tRNA synthetase, Domain 2 LFE_RS02390 PF00994 Probable molybdopterin binding domain LFE_RS02395 PF01967 MoaC family LFE_RS02400 PF03454 MoeA C-terminal region (domain IV) LFE_RS02400 PF00994 Probable molybdopterin binding domain LFE_RS02400 PF03453 MoeA N-terminal region (domain I and II) LFE_RS02405 PF02391 MoaE protein LFE_RS02415 PF04055 Radical SAM superfamily LFE_RS02415 PF06463 Molybdenum Cofactor Synthesis C LFE_RS02420 PF00543 Nitrogen regulatory protein P-II LFE_RS02430 PF07690 Major Facilitator Superfamily LFE_RS02460 PF12849 PBP superfamily domain LFE_RS02475 PF01381 Helix-turn-helix LFE_RS02490 PF00563 EAL domain LFE_RS02490 PF03707 Bacterial signalling protein N terminal repeat LFE_RS02490 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS02495 PF01625 Peptide methionine sulfoxide reductase LFE_RS02500 PF00107 Zinc-binding dehydrogenase LFE_RS02500 PF08240 Alcohol dehydrogenase GroES-like domain LFE_RS02535 PF00437 Type II/IV secretion system protein LFE_RS02555 PF03958 Bacterial type II/III secretion system short domain LFE_RS02555 PF00263 Bacterial type II and III secretion system protein LFE_RS02560 PF00437 Type II/IV secretion system protein LFE_RS02560 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain LFE_RS02595 PF02743 Cache domain LFE_RS02595 PF00672 HAMP domain LFE_RS02595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFE_RS02600 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV LFE_RS02605 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFE_RS02605 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFE_RS02605 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFE_RS02605 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFE_RS02610 PF13567 Domain of unknown function (DUF4131) LFE_RS02610 PF03772 Competence protein LFE_RS02610 PF00753 Metallo-beta-lactamase superfamily LFE_RS02615 PF01555 DNA methylase LFE_RS02615 PF18273 Type III R-M EcoP15I C-terminal domain LFE_RS02630 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LFE_RS02630 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LFE_RS02630 PF10531 SLBB domain LFE_RS02640 PF00589 Phage integrase family LFE_RS02685 PF02154 Flagellar motor switch protein FliM LFE_RS02685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LFE_RS02720 PF00717 Peptidase S24-like LFE_RS02720 PF01381 Helix-turn-helix LFE_RS02785 PF00436 Single-strand binding protein family LFE_RS02870 PF18340 DNA relaxase TraI 2B/2B-like domain LFE_RS02870 PF07057 DNA helicase TraI LFE_RS02870 PF18272 single-stranded DNA binding TraI N-terminal subdomain LFE_RS02870 PF07057 DNA helicase TraI LFE_RS02870 PF08751 TrwC relaxase LFE_RS02870 PF18340 DNA relaxase TraI 2B/2B-like domain LFE_RS02870 PF08751 TrwC relaxase LFE_RS02870 PF18272 single-stranded DNA binding TraI N-terminal subdomain LFE_RS02915 PF12792 CSS motif domain associated with EAL LFE_RS02915 PF00563 EAL domain LFE_RS02930 PF00437 Type II/IV secretion system protein LFE_RS02985 PF00437 Type II/IV secretion system protein LFE_RS03015 PF02899 Phage integrase, N-terminal SAM-like domain LFE_RS03015 PF00589 Phage integrase family LFE_RS03020 PF00072 Response regulator receiver domain LFE_RS03020 PF01966 HD domain LFE_RS03030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFE_RS03030 PF00672 HAMP domain LFE_RS03030 PF02203 Tar ligand binding domain homologue LFE_RS03060 PF00563 EAL domain LFE_RS03060 PF03707 Bacterial signalling protein N terminal repeat LFE_RS03060 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS03095 PF01131 DNA topoisomerase LFE_RS03095 PF01751 Toprim domain LFE_RS03170 PF18766 SWI2/SNF2 ATPase LFE_RS03170 PF12008 Type I restriction and modification enzyme - subunit R C terminal LFE_RS03170 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LFE_RS03185 PF02384 N-6 DNA Methylase LFE_RS03185 PF12161 HsdM N-terminal domain LFE_RS03210 PF00248 Aldo/keto reductase family LFE_RS03240 PF01641 SelR domain LFE_RS03260 PF02457 DisA bacterial checkpoint controller nucleotide-binding LFE_RS03265 PF00809 Pterin binding enzyme LFE_RS03270 PF01434 Peptidase family M41 LFE_RS03270 PF06480 FtsH Extracellular LFE_RS03270 PF17862 AAA+ lid domain LFE_RS03270 PF00004 ATPase family associated with various cellular activities (AAA) LFE_RS03275 PF00156 Phosphoribosyl transferase domain LFE_RS03285 PF06574 FAD synthetase LFE_RS03285 PF01687 Riboflavin kinase LFE_RS03290 PF00490 Delta-aminolevulinic acid dehydratase LFE_RS03295 PF02602 Uroporphyrinogen-III synthase HemD LFE_RS03295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFE_RS03300 PF02678 Pirin LFE_RS03300 PF05726 Pirin C-terminal cupin domain LFE_RS03305 PF03900 Porphobilinogen deaminase, C-terminal domain LFE_RS03305 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain LFE_RS03310 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain LFE_RS03310 PF01488 Shikimate / quinate 5-dehydrogenase LFE_RS03310 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain LFE_RS03325 PF04055 Radical SAM superfamily LFE_RS03325 PF12544 Lysine-2,3-aminomutase LFE_RS03330 PF00881 Nitroreductase family LFE_RS03335 PF00692 dUTPase LFE_RS03340 PF00004 ATPase family associated with various cellular activities (AAA) LFE_RS03340 PF16450 Proteasomal ATPase OB C-terminal domain LFE_RS03340 PF17758 Proteasomal ATPase OB N-terminal domain LFE_RS03345 PF03136 Pup-ligase protein LFE_RS03355 PF00227 Proteasome subunit LFE_RS03365 PF03136 Pup-ligase protein LFE_RS03375 PF00288 GHMP kinases N terminal domain LFE_RS03375 PF08544 GHMP kinases C terminal LFE_RS03435 PF03781 Sulfatase-modifying factor enzyme 1 LFE_RS03435 PF12867 DinB superfamily LFE_RS03470 PF00293 NUDIX domain LFE_RS03475 PF00158 Sigma-54 interaction domain LFE_RS03475 PF00072 Response regulator receiver domain LFE_RS03475 PF02954 Bacterial regulatory protein, Fis family LFE_RS03480 PF00425 chorismate binding enzyme LFE_RS03480 PF04715 Anthranilate synthase component I, N terminal region LFE_RS03485 PF00117 Glutamine amidotransferase class-I LFE_RS03490 PF02885 Glycosyl transferase family, helical bundle domain LFE_RS03490 PF00591 Glycosyl transferase family, a/b domain LFE_RS03495 PF00218 Indole-3-glycerol phosphate synthase LFE_RS03500 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LFE_RS03505 PF00291 Pyridoxal-phosphate dependent enzyme LFE_RS03510 PF00290 Tryptophan synthase alpha chain LFE_RS03515 PF01039 Carboxyl transferase domain LFE_RS03515 PF17848 Acetyl-coA carboxylase zinc finger domain LFE_RS03520 PF08245 Mur ligase middle domain LFE_RS03520 PF02875 Mur ligase family, glutamate ligase domain LFE_RS03525 PF04453 LPS transport system D LFE_RS03525 PF03968 OstA-like protein LFE_RS03535 PF01513 ATP-NAD kinase LFE_RS03545 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFE_RS03545 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LFE_RS03545 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LFE_RS03555 PF00033 Cytochrome b/b6/petB LFE_RS03575 PF13732 Domain of unknown function (DUF4162) LFE_RS03575 PF00005 ABC transporter LFE_RS03580 PF01061 ABC-2 type transporter LFE_RS03585 PF04461 Protein of unknown function (DUF520) LFE_RS03590 PF01343 Peptidase family S49 LFE_RS03645 PF01230 HIT domain LFE_RS03655 PF00156 Phosphoribosyl transferase domain LFE_RS03660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LFE_RS03660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LFE_RS03665 PF01979 Amidohydrolase family LFE_RS03670 PF00117 Glutamine amidotransferase class-I LFE_RS03670 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LFE_RS03680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFE_RS03680 PF02142 MGS-like domain LFE_RS03680 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LFE_RS03685 PF03449 Transcription elongation factor, N-terminal LFE_RS03685 PF01272 Transcription elongation factor, GreA/GreB, C-term LFE_RS03695 PF01521 Iron-sulphur cluster biosynthesis LFE_RS03700 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain LFE_RS03700 PF01464 Transglycosylase SLT domain LFE_RS03710 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFE_RS03710 PF00403 Heavy-metal-associated domain LFE_RS03710 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFE_RS03715 PF00120 Glutamine synthetase, catalytic domain LFE_RS03715 PF03951 Glutamine synthetase, beta-Grasp domain LFE_RS03720 PF01590 GAF domain LFE_RS03720 PF02954 Bacterial regulatory protein, Fis family LFE_RS03720 PF00158 Sigma-54 interaction domain LFE_RS03725 PF02938 GAD domain LFE_RS03725 PF01336 OB-fold nucleic acid binding domain LFE_RS03725 PF00152 tRNA synthetases class II (D, K and N) LFE_RS03735 PF02540 NAD synthase LFE_RS03735 PF00958 GMP synthase C terminal domain LFE_RS03735 PF00117 Glutamine amidotransferase class-I LFE_RS03740 PF00478 IMP dehydrogenase / GMP reductase domain LFE_RS03740 PF00571 CBS domain LFE_RS03770 PF00472 RF-1 domain LFE_RS03770 PF03462 PCRF domain LFE_RS03775 PF00795 Carbon-nitrogen hydrolase LFE_RS03785 PF04675 DNA ligase N terminus LFE_RS03785 PF01068 ATP dependent DNA ligase domain LFE_RS03785 PF04679 ATP dependent DNA ligase C terminal region LFE_RS03795 PF00004 ATPase family associated with various cellular activities (AAA) LFE_RS03795 PF02190 ATP-dependent protease La (LON) substrate-binding domain LFE_RS03795 PF05362 Lon protease (S16) C-terminal proteolytic domain LFE_RS03800 PF00633 Helix-hairpin-helix motif LFE_RS03800 PF00730 HhH-GPD superfamily base excision DNA repair protein LFE_RS03810 PF13393 Histidyl-tRNA synthetase LFE_RS03810 PF03129 Anticodon binding domain LFE_RS03820 PF06421 GTP-binding protein LepA C-terminus LFE_RS03820 PF03144 Elongation factor Tu domain 2 LFE_RS03820 PF00009 Elongation factor Tu GTP binding domain LFE_RS03820 PF00679 Elongation factor G C-terminus LFE_RS03825 PF10502 Signal peptidase, peptidase S26 LFE_RS03830 PF01467 Cytidylyltransferase-like LFE_RS03830 PF00294 pfkB family carbohydrate kinase LFE_RS03835 PF02348 Cytidylyltransferase LFE_RS03840 PF06418 CTP synthase N-terminus LFE_RS03840 PF00117 Glutamine amidotransferase class-I LFE_RS03845 PF00793 DAHP synthetase I family LFE_RS03850 PF01380 SIS domain LFE_RS03850 PF00571 CBS domain LFE_RS03860 PF01066 CDP-alcohol phosphatidyltransferase LFE_RS03865 PF02660 Glycerol-3-phosphate acyltransferase LFE_RS03875 PF01627 Hpt domain LFE_RS03875 PF00512 His Kinase A (phospho-acceptor) domain LFE_RS03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS03875 PF00072 Response regulator receiver domain LFE_RS03885 PF00072 Response regulator receiver domain LFE_RS03885 PF02954 Bacterial regulatory protein, Fis family LFE_RS03885 PF00158 Sigma-54 interaction domain LFE_RS03890 PF01925 Sulfite exporter TauE/SafE LFE_RS03905 PF04055 Radical SAM superfamily LFE_RS03925 PF00115 Cytochrome C and Quinol oxidase polypeptide I LFE_RS03930 PF02416 mttA/Hcf106 family LFE_RS03940 PF00180 Isocitrate/isopropylmalate dehydrogenase LFE_RS03940 PF18324 Hypothetical protein TT1725 LFE_RS03950 PF00072 Response regulator receiver domain LFE_RS03950 PF02954 Bacterial regulatory protein, Fis family LFE_RS03950 PF00158 Sigma-54 interaction domain LFE_RS03955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS03955 PF00512 His Kinase A (phospho-acceptor) domain LFE_RS03955 PF00989 PAS fold LFE_RS03955 PF13426 PAS domain LFE_RS03955 PF13188 PAS domain LFE_RS03960 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) LFE_RS03965 PF00361 Proton-conducting membrane transporter LFE_RS03965 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LFE_RS03985 PF03099 Biotin/lipoate A/B protein ligase family LFE_RS03995 PF00534 Glycosyl transferases group 1 LFE_RS04030 PF00892 EamA-like transporter family LFE_RS04035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFE_RS04035 PF03466 LysR substrate binding domain LFE_RS04090 PF00589 Phage integrase family LFE_RS04100 PF01594 AI-2E family transporter LFE_RS04105 PF00694 Aconitase C-terminal domain LFE_RS04110 PF00330 Aconitase family (aconitate hydratase) LFE_RS04115 PF16363 GDP-mannose 4,6 dehydratase LFE_RS04120 PF00483 Nucleotidyl transferase LFE_RS04125 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LFE_RS04145 PF13426 PAS domain LFE_RS04145 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS04145 PF00563 EAL domain LFE_RS04185 PF00266 Aminotransferase class-V LFE_RS04195 PF13380 CoA binding domain LFE_RS04200 PF02040 Arsenical pump membrane protein LFE_RS04205 PF00155 Aminotransferase class I and II LFE_RS04215 PF00578 AhpC/TSA family LFE_RS04230 PF03150 Di-haem cytochrome c peroxidase LFE_RS04230 PF00034 Cytochrome c LFE_RS04235 PF10417 C-terminal domain of 1-Cys peroxiredoxin LFE_RS04235 PF00578 AhpC/TSA family LFE_RS04240 PF03079 ARD/ARD' family LFE_RS04245 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LFE_RS04245 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LFE_RS04255 PF00596 Class II Aldolase and Adducin N-terminal domain LFE_RS04260 PF01593 Flavin containing amine oxidoreductase LFE_RS04265 PF00149 Calcineurin-like phosphoesterase LFE_RS04270 PF14765 Polyketide synthase dehydratase LFE_RS04270 PF08659 KR domain LFE_RS04270 PF02801 Beta-ketoacyl synthase, C-terminal domain LFE_RS04270 PF00109 Beta-ketoacyl synthase, N-terminal domain LFE_RS04270 PF16197 Ketoacyl-synthetase C-terminal extension LFE_RS04270 PF08240 Alcohol dehydrogenase GroES-like domain LFE_RS04270 PF00698 Acyl transferase domain LFE_RS04270 PF00550 Phosphopantetheine attachment site LFE_RS04275 PF06463 Molybdenum Cofactor Synthesis C LFE_RS04275 PF04055 Radical SAM superfamily LFE_RS04280 PF02685 Glucokinase LFE_RS04290 PF02779 Transketolase, pyrimidine binding domain LFE_RS04290 PF00456 Transketolase, thiamine diphosphate binding domain LFE_RS04290 PF02780 Transketolase, C-terminal domain LFE_RS04295 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LFE_RS04295 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LFE_RS04305 PF01494 FAD binding domain LFE_RS04310 PF05697 Bacterial trigger factor protein (TF) LFE_RS04310 PF05698 Bacterial trigger factor protein (TF) C-terminus LFE_RS04310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LFE_RS04315 PF00574 Clp protease LFE_RS04320 PF06689 ClpX C4-type zinc finger LFE_RS04320 PF07724 AAA domain (Cdc48 subfamily) LFE_RS04320 PF10431 C-terminal, D2-small domain, of ClpB protein LFE_RS04335 PF01066 CDP-alcohol phosphatidyltransferase LFE_RS04345 PF08544 GHMP kinases C terminal LFE_RS04345 PF00288 GHMP kinases N terminal domain LFE_RS04355 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LFE_RS04355 PF14572 Phosphoribosyl synthetase-associated domain LFE_RS04360 PF14693 Ribosomal protein TL5, C-terminal domain LFE_RS04360 PF01386 Ribosomal L25p family LFE_RS04365 PF01195 Peptidyl-tRNA hydrolase LFE_RS04370 PF06071 Protein of unknown function (DUF933) LFE_RS04370 PF01926 50S ribosome-binding GTPase LFE_RS04375 PF01250 Ribosomal protein S6 LFE_RS04380 PF00436 Single-strand binding protein family LFE_RS04385 PF01084 Ribosomal protein S18 LFE_RS04395 PF05036 Sporulation related domain LFE_RS04395 PF03330 Lytic transglycolase LFE_RS04410 PF18693 TRAM domain LFE_RS04410 PF00919 Uncharacterized protein family UPF0004 LFE_RS04410 PF04055 Radical SAM superfamily LFE_RS04425 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFE_RS04450 PF03143 Elongation factor Tu C-terminal domain LFE_RS04450 PF03144 Elongation factor Tu domain 2 LFE_RS04450 PF00009 Elongation factor Tu GTP binding domain LFE_RS04465 PF02357 Transcription termination factor nusG LFE_RS04465 PF00467 KOW motif LFE_RS04470 PF00298 Ribosomal protein L11, RNA binding domain LFE_RS04470 PF03946 Ribosomal protein L11, N-terminal domain LFE_RS04475 PF00687 Ribosomal protein L1p/L10e family LFE_RS04480 PF00466 Ribosomal protein L10 LFE_RS04485 PF16320 Ribosomal protein L7/L12 dimerisation domain LFE_RS04485 PF00542 Ribosomal protein L7/L12 C-terminal domain LFE_RS04490 PF04561 RNA polymerase Rpb2, domain 2 LFE_RS04490 PF10385 RNA polymerase beta subunit external 1 domain LFE_RS04490 PF04563 RNA polymerase beta subunit LFE_RS04490 PF04560 RNA polymerase Rpb2, domain 7 LFE_RS04490 PF04565 RNA polymerase Rpb2, domain 3 LFE_RS04490 PF00562 RNA polymerase Rpb2, domain 6 LFE_RS04495 PF04983 RNA polymerase Rpb1, domain 3 LFE_RS04495 PF04998 RNA polymerase Rpb1, domain 5 LFE_RS04495 PF00623 RNA polymerase Rpb1, domain 2 LFE_RS04495 PF04997 RNA polymerase Rpb1, domain 1 LFE_RS04495 PF05000 RNA polymerase Rpb1, domain 4 LFE_RS04500 PF00164 Ribosomal protein S12/S23 LFE_RS04505 PF00177 Ribosomal protein S7p/S5e LFE_RS04510 PF03144 Elongation factor Tu domain 2 LFE_RS04510 PF14492 Elongation Factor G, domain II LFE_RS04510 PF00679 Elongation factor G C-terminus LFE_RS04510 PF00009 Elongation factor Tu GTP binding domain LFE_RS04510 PF03764 Elongation factor G, domain IV LFE_RS04515 PF03144 Elongation factor Tu domain 2 LFE_RS04515 PF03143 Elongation factor Tu C-terminal domain LFE_RS04515 PF00009 Elongation factor Tu GTP binding domain LFE_RS04520 PF00338 Ribosomal protein S10p/S20e LFE_RS04525 PF00297 Ribosomal protein L3 LFE_RS04530 PF00573 Ribosomal protein L4/L1 family LFE_RS04535 PF00276 Ribosomal protein L23 LFE_RS04540 PF00181 Ribosomal Proteins L2, RNA binding domain LFE_RS04540 PF03947 Ribosomal Proteins L2, C-terminal domain LFE_RS04545 PF00203 Ribosomal protein S19 LFE_RS04550 PF00237 Ribosomal protein L22p/L17e LFE_RS04555 PF00189 Ribosomal protein S3, C-terminal domain LFE_RS04555 PF07650 KH domain LFE_RS04560 PF00252 Ribosomal protein L16p/L10e LFE_RS04565 PF00831 Ribosomal L29 protein LFE_RS04570 PF00366 Ribosomal protein S17 LFE_RS04575 PF00238 Ribosomal protein L14p/L23e LFE_RS04580 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 LFE_RS04580 PF00467 KOW motif LFE_RS04585 PF00673 ribosomal L5P family C-terminus LFE_RS04585 PF00281 Ribosomal protein L5 LFE_RS04590 PF00410 Ribosomal protein S8 LFE_RS04595 PF00347 Ribosomal protein L6 LFE_RS04600 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast LFE_RS04605 PF00333 Ribosomal protein S5, N-terminal domain LFE_RS04605 PF03719 Ribosomal protein S5, C-terminal domain LFE_RS04610 PF00327 Ribosomal protein L30p/L7e LFE_RS04615 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A LFE_RS04620 PF00344 SecY translocase LFE_RS04625 PF05191 Adenylate kinase, active site lid LFE_RS04630 PF00557 Metallopeptidase family M24 LFE_RS04635 PF01176 Translation initiation factor 1A / IF-1 LFE_RS04640 PF00416 Ribosomal protein S13/S18 LFE_RS04645 PF00411 Ribosomal protein S11 LFE_RS04650 PF01479 S4 domain LFE_RS04650 PF00163 Ribosomal protein S4/S9 N-terminal domain LFE_RS04655 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LFE_RS04655 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LFE_RS04655 PF01000 RNA polymerase Rpb3/RpoA insert domain LFE_RS04660 PF01196 Ribosomal protein L17 LFE_RS04680 PF02358 Trehalose-phosphatase LFE_RS04685 PF00982 Glycosyltransferase family 20 LFE_RS04690 PF13439 Glycosyltransferase Family 4 LFE_RS04690 PF00534 Glycosyl transferases group 1 LFE_RS04705 PF01370 NAD dependent epimerase/dehydratase family LFE_RS04715 PF00156 Phosphoribosyl transferase domain LFE_RS04720 PF02769 AIR synthase related protein, C-terminal domain LFE_RS04720 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain LFE_RS04720 PF00586 AIR synthase related protein, N-terminal domain LFE_RS04740 PF17932 Tetracyclin repressor-like, C-terminal domain LFE_RS04740 PF00440 Bacterial regulatory proteins, tetR family LFE_RS04755 PF00873 AcrB/AcrD/AcrF family LFE_RS04765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFE_RS04765 PF03466 LysR substrate binding domain LFE_RS04785 PF00005 ABC transporter LFE_RS04795 PF00175 Oxidoreductase NAD-binding domain LFE_RS04795 PF00970 Oxidoreductase FAD-binding domain LFE_RS04795 PF00111 2Fe-2S iron-sulfur cluster binding domain LFE_RS04840 PF16363 GDP-mannose 4,6 dehydratase LFE_RS04860 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LFE_RS04870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFE_RS04870 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFE_RS04875 PF00282 Pyridoxal-dependent decarboxylase conserved domain LFE_RS04880 PF02254 TrkA-N domain LFE_RS04880 PF07885 Ion channel LFE_RS04885 PF00873 AcrB/AcrD/AcrF family LFE_RS04895 PF02581 Thiamine monophosphate synthase LFE_RS04900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LFE_RS04900 PF00289 Biotin carboxylase, N-terminal domain LFE_RS04900 PF02785 Biotin carboxylase C-terminal domain LFE_RS04905 PF00364 Biotin-requiring enzyme LFE_RS04910 PF08207 Elongation factor P (EF-P) KOW-like domain LFE_RS04910 PF09285 Elongation factor P, C-terminal LFE_RS04910 PF01132 Elongation factor P (EF-P) OB domain LFE_RS04915 PF01220 Dehydroquinase class II LFE_RS04930 PF04127 DNA / pantothenate metabolism flavoprotein LFE_RS04930 PF02441 Flavoprotein LFE_RS04935 PF01192 RNA polymerase Rpb6 LFE_RS04940 PF00625 Guanylate kinase LFE_RS04945 PF04025 Domain of unknown function (DUF370) LFE_RS04950 PF08340 Domain of unknown function (DUF1732) LFE_RS04950 PF03755 YicC-like family, N-terminal region LFE_RS04985 PF00155 Aminotransferase class I and II LFE_RS04990 PF03744 6-carboxyhexanoate--CoA ligase LFE_RS04995 PF04055 Radical SAM superfamily LFE_RS04995 PF06968 Biotin and Thiamin Synthesis associated domain LFE_RS05000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LFE_RS05005 PF02082 Transcriptional regulator LFE_RS05015 PF02091 Glycyl-tRNA synthetase alpha subunit LFE_RS05020 PF05746 DALR anticodon binding domain LFE_RS05020 PF02092 Glycyl-tRNA synthetase beta subunit LFE_RS05025 PF01872 RibD C-terminal domain LFE_RS05025 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LFE_RS05030 PF00677 Lumazine binding domain LFE_RS05035 PF12849 PBP superfamily domain LFE_RS05040 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS05045 PF03884 DNA gyrase inhibitor YacG LFE_RS05050 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFE_RS05060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFE_RS05070 PF07685 CobB/CobQ-like glutamine amidotransferase domain LFE_RS05070 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LFE_RS05075 PF03186 CobD/Cbib protein LFE_RS05080 PF00155 Aminotransferase class I and II LFE_RS05095 PF10415 Fumarase C C-terminus LFE_RS05095 PF00206 Lyase LFE_RS05105 PF00708 Acylphosphatase LFE_RS05115 PF00156 Phosphoribosyl transferase domain LFE_RS05125 PF00310 Glutamine amidotransferases class-II LFE_RS05125 PF04898 Glutamate synthase central domain LFE_RS05125 PF01645 Conserved region in glutamate synthase LFE_RS05125 PF01493 GXGXG motif LFE_RS05135 PF01966 HD domain LFE_RS05135 PF01336 OB-fold nucleic acid binding domain LFE_RS05140 PF02913 FAD linked oxidases, C-terminal domain LFE_RS05140 PF01565 FAD binding domain LFE_RS05145 PF01161 Phosphatidylethanolamine-binding protein LFE_RS05175 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFE_RS05185 PF02322 Cytochrome bd terminal oxidase subunit II LFE_RS05190 PF01654 Cytochrome bd terminal oxidase subunit I LFE_RS05195 PF00072 Response regulator receiver domain LFE_RS05195 PF00158 Sigma-54 interaction domain LFE_RS05195 PF02954 Bacterial regulatory protein, Fis family LFE_RS05215 PF03372 Endonuclease/Exonuclease/phosphatase family LFE_RS05225 PF02548 Ketopantoate hydroxymethyltransferase LFE_RS05235 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LFE_RS05235 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LFE_RS05250 PF01227 GTP cyclohydrolase I LFE_RS05270 PF02224 Cytidylate kinase LFE_RS05275 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LFE_RS05285 PF18152 DAHP synthase ferredoxin-like domain LFE_RS05285 PF00793 DAHP synthetase I family LFE_RS05290 PF01842 ACT domain LFE_RS05290 PF00800 Prephenate dehydratase LFE_RS05290 PF01817 Chorismate mutase type II LFE_RS05295 PF01709 Transcriptional regulator LFE_RS05320 PF13533 Biotin-lipoyl like LFE_RS05325 PF00128 Alpha amylase, catalytic domain LFE_RS05325 PF11941 Domain of unknown function (DUF3459) LFE_RS05330 PF00128 Alpha amylase, catalytic domain LFE_RS05335 PF00128 Alpha amylase, catalytic domain LFE_RS05335 PF16657 Maltogenic Amylase, C-terminal domain LFE_RS05340 PF16657 Maltogenic Amylase, C-terminal domain LFE_RS05340 PF00128 Alpha amylase, catalytic domain LFE_RS05345 PF11896 Domain of unknown function (DUF3416) LFE_RS05365 PF01266 FAD dependent oxidoreductase LFE_RS05370 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LFE_RS05370 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LFE_RS05370 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LFE_RS05375 PF03749 Sugar fermentation stimulation protein RE domain LFE_RS05375 PF17746 SfsA N-terminal OB domain LFE_RS05380 PF16363 GDP-mannose 4,6 dehydratase LFE_RS05390 PF00334 Nucleoside diphosphate kinase LFE_RS05405 PF00579 tRNA synthetases class I (W and Y) LFE_RS05405 PF01479 S4 domain LFE_RS05415 PF00873 AcrB/AcrD/AcrF family LFE_RS05465 PF05016 ParE toxin of type II toxin-antitoxin system, parDE LFE_RS05495 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LFE_RS05495 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LFE_RS05495 PF00037 4Fe-4S binding domain LFE_RS05505 PF01258 Prokaryotic dksA/traR C4-type zinc finger LFE_RS05510 PF01790 Prolipoprotein diacylglyceryl transferase LFE_RS05515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFE_RS05515 PF00672 HAMP domain LFE_RS05515 PF02743 Cache domain LFE_RS05540 PF12704 MacB-like periplasmic core domain LFE_RS05540 PF02687 FtsX-like permease family LFE_RS05545 PF00005 ABC transporter LFE_RS05550 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFE_RS05550 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFE_RS05595 PF12592 Protein of unknown function (DUF3763) LFE_RS05595 PF07728 AAA domain (dynein-related subfamily) LFE_RS05595 PF17868 AAA lid domain LFE_RS05610 PF02810 SEC-C motif LFE_RS05610 PF07516 SecA Wing and Scaffold domain LFE_RS05610 PF01043 SecA preprotein cross-linking domain LFE_RS05610 PF07517 SecA DEAD-like domain LFE_RS05630 PF04055 Radical SAM superfamily LFE_RS05630 PF06969 HemN C-terminal domain LFE_RS05635 PF02899 Phage integrase, N-terminal SAM-like domain LFE_RS05635 PF00589 Phage integrase family LFE_RS05655 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LFE_RS05655 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LFE_RS05665 PF08323 Starch synthase catalytic domain LFE_RS05665 PF00534 Glycosyl transferases group 1 LFE_RS05675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFE_RS05675 PF12729 Four helix bundle sensory module for signal transduction LFE_RS05675 PF00672 HAMP domain LFE_RS05680 PF05257 CHAP domain LFE_RS05680 PF01476 LysM domain LFE_RS05695 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LFE_RS05695 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LFE_RS05695 PF10531 SLBB domain LFE_RS05700 PF00731 AIR carboxylase LFE_RS05705 PF02222 ATP-grasp domain LFE_RS05705 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain LFE_RS05720 PF00211 Adenylate and Guanylate cyclase catalytic domain LFE_RS05735 PF10282 Lactonase, 7-bladed beta-propeller LFE_RS05750 PF02321 Outer membrane efflux protein LFE_RS05755 PF00873 AcrB/AcrD/AcrF family LFE_RS05760 PF13533 Biotin-lipoyl like LFE_RS05775 PF00155 Aminotransferase class I and II LFE_RS05785 PF01842 ACT domain LFE_RS05785 PF00742 Homoserine dehydrogenase LFE_RS05785 PF03447 Homoserine dehydrogenase, NAD binding domain LFE_RS05790 PF00291 Pyridoxal-phosphate dependent enzyme LFE_RS05800 PF13840 ACT domain LFE_RS05800 PF01842 ACT domain LFE_RS05800 PF00696 Amino acid kinase family LFE_RS05805 PF00682 HMGL-like LFE_RS05805 PF08502 LeuA allosteric (dimerisation) domain LFE_RS05810 PF00132 Bacterial transferase hexapeptide (six repeats) LFE_RS05810 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LFE_RS05815 PF00216 Bacterial DNA-binding protein LFE_RS05830 PF01975 Survival protein SurE LFE_RS05840 PF01406 tRNA synthetases class I (C) catalytic domain LFE_RS05840 PF09190 DALR domain LFE_RS05845 PF00588 SpoU rRNA Methylase family LFE_RS05845 PF08032 RNA 2'-O ribose methyltransferase substrate binding LFE_RS05850 PF08534 Redoxin LFE_RS05855 PF02540 NAD synthase LFE_RS05855 PF00795 Carbon-nitrogen hydrolase LFE_RS05860 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LFE_RS05860 PF00925 GTP cyclohydrolase II LFE_RS05865 PF00885 6,7-dimethyl-8-ribityllumazine synthase LFE_RS05885 PF10397 Adenylosuccinate lyase C-terminus LFE_RS05885 PF00206 Lyase LFE_RS05890 PF01259 SAICAR synthetase LFE_RS05930 PF02558 Ketopantoate reductase PanE/ApbA LFE_RS05930 PF08546 Ketopantoate reductase PanE/ApbA C terminal LFE_RS05935 PF02310 B12 binding domain LFE_RS05935 PF04055 Radical SAM superfamily LFE_RS05945 PF00343 Carbohydrate phosphorylase LFE_RS05950 PF00106 short chain dehydrogenase LFE_RS05960 PF00563 EAL domain LFE_RS05960 PF03707 Bacterial signalling protein N terminal repeat LFE_RS05960 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS05965 PF00106 short chain dehydrogenase LFE_RS05975 PF16200 C-terminal region of band_7 LFE_RS05975 PF01145 SPFH domain / Band 7 family LFE_RS05985 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LFE_RS05985 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LFE_RS06010 PF03960 ArsC family LFE_RS06030 PF04055 Radical SAM superfamily LFE_RS06035 PF00196 Bacterial regulatory proteins, luxR family LFE_RS06035 PF00072 Response regulator receiver domain LFE_RS06040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS06040 PF00512 His Kinase A (phospho-acceptor) domain LFE_RS06040 PF00989 PAS fold LFE_RS06040 PF16736 Single Cache-like LFE_RS06045 PF00324 Amino acid permease LFE_RS06055 PF02669 K+-transporting ATPase, c chain LFE_RS06060 PF03814 Potassium-transporting ATPase A subunit LFE_RS06075 PF02702 Osmosensitive K+ channel His kinase sensor domain LFE_RS06110 PF02163 Peptidase family M50 LFE_RS06115 PF00579 tRNA synthetases class I (W and Y) LFE_RS06120 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LFE_RS06125 PF01336 OB-fold nucleic acid binding domain LFE_RS06125 PF14579 Helix-hairpin-helix motif LFE_RS06125 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LFE_RS06125 PF07733 Bacterial DNA polymerase III alpha NTPase domain LFE_RS06125 PF02811 PHP domain LFE_RS06130 PF00580 UvrD/REP helicase N-terminal domain LFE_RS06130 PF13361 UvrD-like helicase C-terminal domain LFE_RS06170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LFE_RS06190 PF00266 Aminotransferase class-V LFE_RS06195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LFE_RS06195 PF01842 ACT domain LFE_RS06195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LFE_RS06200 PF13393 Histidyl-tRNA synthetase LFE_RS06205 PF00772 DnaB-like helicase N terminal domain LFE_RS06205 PF03796 DnaB-like helicase C terminal domain LFE_RS06210 PF11612 Type II secretion system (T2SS), protein J LFE_RS06210 PF07963 Prokaryotic N-terminal methylation motif LFE_RS06225 PF01797 Transposase IS200 like LFE_RS06235 PF00313 'Cold-shock' DNA-binding domain LFE_RS06240 PF02954 Bacterial regulatory protein, Fis family LFE_RS06240 PF00158 Sigma-54 interaction domain LFE_RS06240 PF00072 Response regulator receiver domain LFE_RS06255 PF02405 Permease MlaE LFE_RS06260 PF00005 ABC transporter LFE_RS06285 PF02824 TGS domain LFE_RS06285 PF13291 ACT domain LFE_RS06285 PF04607 Region found in RelA / SpoT proteins LFE_RS06295 PF02355 Protein export membrane protein LFE_RS06295 PF07549 SecD/SecF GG Motif LFE_RS06300 PF07549 SecD/SecF GG Motif LFE_RS06300 PF02355 Protein export membrane protein LFE_RS06310 PF01702 Queuine tRNA-ribosyltransferase LFE_RS06315 PF00750 tRNA synthetases class I (R) LFE_RS06315 PF03485 Arginyl tRNA synthetase N terminal domain LFE_RS06315 PF05746 DALR anticodon binding domain LFE_RS06320 PF00156 Phosphoribosyl transferase domain LFE_RS06320 PF01738 Dienelactone hydrolase family LFE_RS06335 PF00814 Glycoprotease family LFE_RS06340 PF00004 ATPase family associated with various cellular activities (AAA) LFE_RS06340 PF07724 AAA domain (Cdc48 subfamily) LFE_RS06340 PF17871 AAA lid domain LFE_RS06340 PF02861 Clp amino terminal domain, pathogenicity island component LFE_RS06340 PF10431 C-terminal, D2-small domain, of ClpB protein LFE_RS06350 PF14403 Circularly permuted ATP-grasp type 2 LFE_RS06355 PF14403 Circularly permuted ATP-grasp type 2 LFE_RS06355 PF04168 A predicted alpha-helical domain with a conserved ER motif. LFE_RS06375 PF01738 Dienelactone hydrolase family LFE_RS06400 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS06405 PF01022 Bacterial regulatory protein, arsR family LFE_RS06420 PF08241 Methyltransferase domain LFE_RS06445 PF00753 Metallo-beta-lactamase superfamily LFE_RS06445 PF00581 Rhodanese-like domain LFE_RS06455 PF07690 Major Facilitator Superfamily LFE_RS06520 PF01048 Phosphorylase superfamily LFE_RS06530 PF08676 MutL C terminal dimerisation domain LFE_RS06530 PF01119 DNA mismatch repair protein, C-terminal domain LFE_RS06550 PF02472 Biopolymer transport protein ExbD/TolR LFE_RS06555 PF01618 MotA/TolQ/ExbB proton channel family LFE_RS06610 PF00873 AcrB/AcrD/AcrF family LFE_RS06615 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFE_RS06615 PF00529 HlyD membrane-fusion protein of T1SS LFE_RS06695 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFE_RS06695 PF00205 Thiamine pyrophosphate enzyme, central domain LFE_RS06695 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFE_RS06735 PF00872 Transposase, Mutator family LFE_RS06805 PF00216 Bacterial DNA-binding protein LFE_RS06815 PF01695 IstB-like ATP binding protein LFE_RS06830 PF00483 Nucleotidyl transferase LFE_RS06835 PF16363 GDP-mannose 4,6 dehydratase LFE_RS06910 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LFE_RS06915 PF00534 Glycosyl transferases group 1 LFE_RS06915 PF00535 Glycosyl transferase family 2 LFE_RS06920 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LFE_RS06935 PF03808 Glycosyl transferase WecB/TagA/CpsF family LFE_RS06940 PF00005 ABC transporter LFE_RS06945 PF01061 ABC-2 type transporter LFE_RS06965 PF01266 FAD dependent oxidoreductase LFE_RS06995 PF02661 Fic/DOC family LFE_RS06995 PF05860 haemagglutination activity domain LFE_RS06995 PF03543 Yersinia/Haemophilus virulence surface antigen LFE_RS06995 PF13332 Hemagglutinin repeat LFE_RS06995 PF13018 Extended Signal Peptide of Type V secretion system LFE_RS07005 PF03466 LysR substrate binding domain LFE_RS07005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LFE_RS07010 PF00892 EamA-like transporter family LFE_RS07015 PF05506 Domain of unknown function (DUF756) LFE_RS07015 PF04185 Phosphoesterase family LFE_RS07035 PF13847 Methyltransferase domain LFE_RS07040 PF08281 Sigma-70, region 4 LFE_RS07040 PF04542 Sigma-70 region 2 LFE_RS07045 PF00072 Response regulator receiver domain LFE_RS07050 PF00072 Response regulator receiver domain LFE_RS07065 PF01209 ubiE/COQ5 methyltransferase family LFE_RS07075 PF04055 Radical SAM superfamily LFE_RS07075 PF01938 TRAM domain LFE_RS07075 PF00919 Uncharacterized protein family UPF0004 LFE_RS07090 PF00762 Ferrochelatase LFE_RS07095 PF00535 Glycosyl transferase family 2 LFE_RS07100 PF00535 Glycosyl transferase family 2 LFE_RS07105 PF00271 Helicase conserved C-terminal domain LFE_RS07105 PF00270 DEAD/DEAH box helicase LFE_RS07160 PF06114 IrrE N-terminal-like domain LFE_RS07190 PF01545 Cation efflux family LFE_RS07190 PF16916 Dimerisation domain of Zinc Transporter LFE_RS07205 PF02397 Bacterial sugar transferase LFE_RS07215 PF01008 Initiation factor 2 subunit family LFE_RS07220 PF01336 OB-fold nucleic acid binding domain LFE_RS07220 PF00152 tRNA synthetases class II (D, K and N) LFE_RS07225 PF02687 FtsX-like permease family LFE_RS07225 PF12704 MacB-like periplasmic core domain LFE_RS07230 PF00005 ABC transporter LFE_RS07250 PF00155 Aminotransferase class I and II LFE_RS07255 PF01467 Cytidylyltransferase-like LFE_RS07275 PF02843 Phosphoribosylglycinamide synthetase, C domain LFE_RS07275 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LFE_RS07275 PF02844 Phosphoribosylglycinamide synthetase, N domain LFE_RS07280 PF02142 MGS-like domain LFE_RS07280 PF01808 AICARFT/IMPCHase bienzyme LFE_RS07290 PF00535 Glycosyl transferase family 2 LFE_RS07305 PF01569 PAP2 superfamily LFE_RS07310 PF06426 Serine acetyltransferase, N-terminal LFE_RS07310 PF00132 Bacterial transferase hexapeptide (six repeats) LFE_RS07315 PF02542 YgbB family LFE_RS07320 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase LFE_RS07335 PF00202 Aminotransferase class-III LFE_RS07345 PF00781 Diacylglycerol kinase catalytic domain LFE_RS07355 PF00534 Glycosyl transferases group 1 LFE_RS07355 PF13439 Glycosyltransferase Family 4 LFE_RS07370 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFE_RS07375 PF03966 Trm112p-like protein LFE_RS07380 PF08645 Polynucleotide kinase 3 phosphatase LFE_RS07385 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFE_RS07390 PF00535 Glycosyl transferase family 2 LFE_RS07405 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFE_RS07410 PF00535 Glycosyl transferase family 2 LFE_RS07420 PF00872 Transposase, Mutator family LFE_RS07435 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFE_RS07440 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFE_RS07445 PF03279 Bacterial lipid A biosynthesis acyltransferase LFE_RS07450 PF02606 Tetraacyldisaccharide-1-P 4'-kinase LFE_RS07460 PF00664 ABC transporter transmembrane region LFE_RS07460 PF00005 ABC transporter LFE_RS07465 PF02684 Lipid-A-disaccharide synthetase LFE_RS07470 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LFE_RS07470 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LFE_RS07480 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 LFE_RS07480 PF00132 Bacterial transferase hexapeptide (six repeats) LFE_RS07485 PF07977 FabA-like domain LFE_RS07490 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD LFE_RS07490 PF00132 Bacterial transferase hexapeptide (six repeats) LFE_RS07500 PF01103 Surface antigen LFE_RS07500 PF07244 Surface antigen variable number repeat LFE_RS07515 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain LFE_RS07515 PF07685 CobB/CobQ-like glutamine amidotransferase domain LFE_RS07535 PF00248 Aldo/keto reductase family LFE_RS07550 PF02654 Cobalamin-5-phosphate synthase LFE_RS07555 PF02277 Phosphoribosyltransferase LFE_RS07580 PF00226 DnaJ domain LFE_RS07580 PF00684 DnaJ central domain LFE_RS07580 PF01556 DnaJ C terminal domain LFE_RS07585 PF00012 Hsp70 protein LFE_RS07590 PF01025 GrpE LFE_RS07595 PF01628 HrcA protein C terminal domain LFE_RS07600 PF07690 Major Facilitator Superfamily LFE_RS07605 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFE_RS07605 PF00529 HlyD membrane-fusion protein of T1SS LFE_RS07615 PF07690 Major Facilitator Superfamily LFE_RS07620 PF13533 Biotin-lipoyl like LFE_RS07630 PF13977 BetI-type transcriptional repressor, C-terminal LFE_RS07630 PF00440 Bacterial regulatory proteins, tetR family LFE_RS07640 PF14489 QueF-like protein LFE_RS07655 PF08376 Nitrate and nitrite sensing LFE_RS07655 PF03861 ANTAR domain LFE_RS07660 PF01761 3-dehydroquinate synthase LFE_RS07665 PF01202 Shikimate kinase LFE_RS07670 PF01264 Chorismate synthase LFE_RS07680 PF03668 P-loop ATPase protein family LFE_RS07685 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LFE_RS07685 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus LFE_RS07690 PF00309 Sigma-54 factor, Activator interacting domain (AID) LFE_RS07690 PF04963 Sigma-54 factor, core binding domain LFE_RS07690 PF04552 Sigma-54, DNA binding domain LFE_RS07695 PF00005 ABC transporter LFE_RS07695 PF12399 Branched-chain amino acid ATP-binding cassette transporter LFE_RS07710 PF00056 lactate/malate dehydrogenase, NAD binding domain LFE_RS07710 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LFE_RS07725 PF07690 Major Facilitator Superfamily LFE_RS07730 PF13533 Biotin-lipoyl like LFE_RS07755 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain LFE_RS07755 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain LFE_RS07760 PF10458 Valyl tRNA synthetase tRNA binding arm LFE_RS07760 PF08264 Anticodon-binding domain of tRNA LFE_RS07760 PF00133 tRNA synthetases class I (I, L, M and V) LFE_RS07765 PF02618 YceG-like family LFE_RS07770 PF03652 Holliday junction resolvase LFE_RS07775 PF02272 DHHA1 domain LFE_RS07775 PF01411 tRNA synthetases class II (A) LFE_RS07775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LFE_RS07780 PF00154 recA bacterial DNA recombination protein LFE_RS07785 PF04608 Phosphatidylglycerophosphatase A LFE_RS07805 PF02675 S-adenosylmethionine decarboxylase LFE_RS07810 PF17284 Spermidine synthase tetramerisation domain LFE_RS07815 PF01276 Orn/Lys/Arg decarboxylase, major domain LFE_RS07815 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain LFE_RS07820 PF03699 Uncharacterised protein family (UPF0182) LFE_RS07825 PF02463 RecF/RecN/SMC N terminal domain LFE_RS07830 PF00085 Thioredoxin LFE_RS07835 PF00118 TCP-1/cpn60 chaperonin family LFE_RS07840 PF00166 Chaperonin 10 Kd subunit LFE_RS07845 PF13180 PDZ domain LFE_RS07845 PF03572 Peptidase family S41 LFE_RS07860 PF01351 Ribonuclease HII LFE_RS07865 PF01245 Ribosomal protein L19 LFE_RS07870 PF01746 tRNA (Guanine-1)-methyltransferase LFE_RS07880 PF00886 Ribosomal protein S16 LFE_RS07885 PF00448 SRP54-type protein, GTPase domain LFE_RS07885 PF02881 SRP54-type protein, helical bundle domain LFE_RS07885 PF02978 Signal peptide binding domain LFE_RS07890 PF00216 Bacterial DNA-binding protein LFE_RS07895 PF01343 Peptidase family S49 LFE_RS07900 PF00575 S1 RNA binding domain LFE_RS07945 PF01475 Ferric uptake regulator family LFE_RS07955 PF00873 AcrB/AcrD/AcrF family LFE_RS07970 PF01743 Poly A polymerase head domain LFE_RS07980 PF02541 Ppx/GppA phosphatase family LFE_RS07990 PF00271 Helicase conserved C-terminal domain LFE_RS07990 PF17191 RecG wedge domain LFE_RS07990 PF00270 DEAD/DEAH box helicase LFE_RS07995 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS08000 PF00830 Ribosomal L28 family LFE_RS08005 PF01042 Endoribonuclease L-PSP LFE_RS08020 PF00032 Cytochrome b(C-terminal)/b6/petD LFE_RS08020 PF00033 Cytochrome b/b6/petB LFE_RS08050 PF05188 MutS domain II LFE_RS08050 PF05192 MutS domain III LFE_RS08050 PF01624 MutS domain I LFE_RS08050 PF00488 MutS domain V LFE_RS08050 PF05190 MutS family domain IV LFE_RS08060 PF03167 Uracil DNA glycosylase superfamily LFE_RS08065 PF03853 YjeF-related protein N-terminus LFE_RS08065 PF01256 Carbohydrate kinase LFE_RS08070 PF01648 4'-phosphopantetheinyl transferase superfamily LFE_RS08075 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ LFE_RS08080 PF05193 Peptidase M16 inactive domain LFE_RS08080 PF00675 Insulinase (Peptidase family M16) LFE_RS08090 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LFE_RS08100 PF00665 Integrase core domain LFE_RS08105 PF01695 IstB-like ATP binding protein LFE_RS08110 PF01548 Transposase LFE_RS08110 PF02371 Transposase IS116/IS110/IS902 family LFE_RS08130 PF00575 S1 RNA binding domain LFE_RS08130 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain LFE_RS08130 PF00013 KH domain LFE_RS08130 PF03725 3' exoribonuclease family, domain 2 LFE_RS08130 PF01138 3' exoribonuclease family, domain 1 LFE_RS08135 PF00312 Ribosomal protein S15 LFE_RS08140 PF09157 Pseudouridine synthase II TruB, C-terminal LFE_RS08140 PF16198 tRNA pseudouridylate synthase B C-terminal domain LFE_RS08140 PF01509 TruB family pseudouridylate synthase (N terminal domain) LFE_RS08145 PF02033 Ribosome-binding factor A LFE_RS08150 PF00009 Elongation factor Tu GTP binding domain LFE_RS08150 PF11987 Translation-initiation factor 2 LFE_RS08150 PF04760 Translation initiation factor IF-2, N-terminal region LFE_RS08155 PF13184 NusA-like KH domain LFE_RS08155 PF00575 S1 RNA binding domain LFE_RS08155 PF08529 NusA N-terminal domain LFE_RS08160 PF17384 RimP C-terminal SH3 domain LFE_RS08160 PF02576 RimP N-terminal domain LFE_RS08170 PF00072 Response regulator receiver domain LFE_RS08170 PF01584 CheW-like domain LFE_RS08220 PF00857 Isochorismatase family LFE_RS08235 PF01361 Tautomerase enzyme LFE_RS08285 PF01370 NAD dependent epimerase/dehydratase family LFE_RS08290 PF02805 Metal binding domain of Ada LFE_RS08290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LFE_RS08290 PF12833 Helix-turn-helix domain LFE_RS08290 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain LFE_RS08295 PF01613 Flavin reductase like domain LFE_RS08300 PF00202 Aminotransferase class-III LFE_RS08305 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFE_RS08360 PF01878 EVE domain LFE_RS08370 PF00440 Bacterial regulatory proteins, tetR family LFE_RS08375 PF06779 Uncharacterised MFS-type transporter YbfB LFE_RS08395 PF06750 Bacterial Peptidase A24 N-terminal domain LFE_RS08395 PF01478 Type IV leader peptidase family LFE_RS08400 PF00582 Universal stress protein family LFE_RS08405 PF02562 PhoH-like protein LFE_RS08415 PF02130 Uncharacterized protein family UPF0054 LFE_RS08420 PF02881 SRP54-type protein, helical bundle domain LFE_RS08420 PF00448 SRP54-type protein, GTPase domain LFE_RS08425 PF01488 Shikimate / quinate 5-dehydrogenase LFE_RS08425 PF08501 Shikimate dehydrogenase substrate binding domain LFE_RS08435 PF08459 UvrC Helix-hairpin-helix N-terminal LFE_RS08435 PF02151 UvrB/uvrC motif LFE_RS08435 PF01541 GIY-YIG catalytic domain LFE_RS08445 PF01964 Radical SAM ThiC family LFE_RS08455 PF02574 Homocysteine S-methyltransferase LFE_RS08455 PF02310 B12 binding domain LFE_RS08455 PF02607 B12 binding domain LFE_RS08455 PF02965 Vitamin B12 dependent methionine synthase, activation domain LFE_RS08455 PF00809 Pterin binding enzyme LFE_RS08465 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LFE_RS08470 PF00679 Elongation factor G C-terminus LFE_RS08470 PF00009 Elongation factor Tu GTP binding domain LFE_RS08470 PF03144 Elongation factor Tu domain 2 LFE_RS08475 PF10672 S-adenosylmethionine-dependent methyltransferase LFE_RS08475 PF17785 PUA-like domain LFE_RS08490 PF01926 50S ribosome-binding GTPase LFE_RS08490 PF07650 KH domain LFE_RS08495 PF00106 short chain dehydrogenase LFE_RS08500 PF01050 Mannose-6-phosphate isomerase LFE_RS08500 PF00483 Nucleotidyl transferase LFE_RS08505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFE_RS08505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFE_RS08505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFE_RS08505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFE_RS08515 PF02082 Transcriptional regulator LFE_RS08530 PF00501 AMP-binding enzyme LFE_RS08535 PF00753 Metallo-beta-lactamase superfamily LFE_RS08535 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LFE_RS08535 PF10996 Beta-Casp domain LFE_RS08540 PF12705 PD-(D/E)XK nuclease superfamily LFE_RS08540 PF00580 UvrD/REP helicase N-terminal domain LFE_RS08540 PF13361 UvrD-like helicase C-terminal domain LFE_RS08545 PF17946 RecC C-terminal domain LFE_RS08555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFE_RS08555 PF13426 PAS domain LFE_RS08555 PF08447 PAS fold LFE_RS08560 PF03239 Iron permease FTR1 family LFE_RS08575 PF00583 Acetyltransferase (GNAT) family LFE_RS08575 PF00696 Amino acid kinase family LFE_RS08580 PF03707 Bacterial signalling protein N terminal repeat LFE_RS08580 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS08580 PF00563 EAL domain LFE_RS08595 PF03992 Antibiotic biosynthesis monooxygenase LFE_RS08620 PF03958 Bacterial type II/III secretion system short domain LFE_RS08620 PF00263 Bacterial type II and III secretion system protein LFE_RS08625 PF00437 Type II/IV secretion system protein LFE_RS08630 PF00482 Type II secretion system (T2SS), protein F LFE_RS08635 PF08334 Type II secretion system (T2SS), protein G LFE_RS08635 PF07963 Prokaryotic N-terminal methylation motif LFE_RS08700 PF00717 Peptidase S24-like LFE_RS08700 PF01726 LexA DNA binding domain LFE_RS08705 PF00361 Proton-conducting membrane transporter LFE_RS08710 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus LFE_RS08710 PF00361 Proton-conducting membrane transporter LFE_RS08715 PF00361 Proton-conducting membrane transporter LFE_RS08715 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LFE_RS08720 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L LFE_RS08725 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 LFE_RS08730 PF12838 4Fe-4S dicluster domain LFE_RS08735 PF00146 NADH dehydrogenase LFE_RS08740 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region LFE_RS08740 PF01568 Molydopterin dinucleotide binding domain LFE_RS08740 PF00384 Molybdopterin oxidoreductase LFE_RS08740 PF13237 4Fe-4S dicluster domain LFE_RS08740 PF04879 Molybdopterin oxidoreductase Fe4S4 domain LFE_RS08745 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit LFE_RS08745 PF00037 4Fe-4S binding domain LFE_RS08745 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region LFE_RS08755 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LFE_RS08760 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LFE_RS08765 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFE_RS08770 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 LFE_RS08775 PF01043 SecA preprotein cross-linking domain LFE_RS08775 PF02810 SEC-C motif LFE_RS08775 PF07516 SecA Wing and Scaffold domain LFE_RS08775 PF07517 SecA DEAD-like domain LFE_RS08795 PF01479 S4 domain LFE_RS08795 PF01728 FtsJ-like methyltransferase LFE_RS08800 PF13292 1-deoxy-D-xylulose-5-phosphate synthase LFE_RS08800 PF02780 Transketolase, C-terminal domain LFE_RS08800 PF02779 Transketolase, pyrimidine binding domain LFE_RS08805 PF00348 Polyprenyl synthetase LFE_RS08810 PF02609 Exonuclease VII small subunit LFE_RS08825 PF12072 Domain of unknown function (DUF3552) LFE_RS08825 PF00013 KH domain LFE_RS08825 PF01966 HD domain LFE_RS08830 PF12002 MgsA AAA+ ATPase C terminal LFE_RS08830 PF16193 AAA C-terminal domain LFE_RS08830 PF00004 ATPase family associated with various cellular activities (AAA) LFE_RS08855 PF00398 Ribosomal RNA adenine dimethylase LFE_RS08860 PF00753 Metallo-beta-lactamase superfamily LFE_RS08860 PF17770 Ribonuclease J C-terminal domain LFE_RS08860 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain LFE_RS08865 PF01580 FtsK/SpoIIIE family LFE_RS08865 PF09397 Ftsk gamma domain LFE_RS08865 PF17854 FtsK alpha domain LFE_RS08865 PF13491 4TM region of DNA translocase FtsK/SpoIIIE LFE_RS08875 PF17755 UvrA DNA-binding domain LFE_RS08875 PF17760 UvrA interaction domain LFE_RS08885 PF04166 Pyridoxal phosphate biosynthetic protein PdxA LFE_RS08905 PF00149 Calcineurin-like phosphoesterase LFE_RS08915 PF00005 ABC transporter LFE_RS08920 PF02405 Permease MlaE LFE_RS08925 PF01261 Xylose isomerase-like TIM barrel LFE_RS08935 PF00989 PAS fold LFE_RS08935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS08935 PF00512 His Kinase A (phospho-acceptor) domain LFE_RS08935 PF16736 Single Cache-like LFE_RS08940 PF00486 Transcriptional regulatory protein, C terminal LFE_RS08940 PF00072 Response regulator receiver domain LFE_RS08950 PF00899 ThiF family LFE_RS08960 PF02597 ThiS family LFE_RS08965 PF00291 Pyridoxal-phosphate dependent enzyme LFE_RS08970 PF00899 ThiF family LFE_RS08975 PF00291 Pyridoxal-phosphate dependent enzyme LFE_RS08980 PF02597 ThiS family LFE_RS08980 PF05690 Thiazole biosynthesis protein ThiG LFE_RS08985 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain LFE_RS08985 PF05221 S-adenosyl-L-homocysteine hydrolase LFE_RS08990 PF00438 S-adenosylmethionine synthetase, N-terminal domain LFE_RS08990 PF02773 S-adenosylmethionine synthetase, C-terminal domain LFE_RS08990 PF02772 S-adenosylmethionine synthetase, central domain LFE_RS08995 PF00180 Isocitrate/isopropylmalate dehydrogenase LFE_RS09005 PF00690 Cation transporter/ATPase, N-terminus LFE_RS09005 PF00689 Cation transporting ATPase, C-terminus LFE_RS09015 PF04055 Radical SAM superfamily LFE_RS09015 PF06969 HemN C-terminal domain LFE_RS09020 PF01208 Uroporphyrinogen decarboxylase (URO-D) LFE_RS09025 PF01903 CbiX LFE_RS09070 PF18693 TRAM domain LFE_RS09070 PF04055 Radical SAM superfamily LFE_RS09070 PF00919 Uncharacterized protein family UPF0004 LFE_RS09075 PF02401 LytB protein LFE_RS09080 PF01370 NAD dependent epimerase/dehydratase family LFE_RS09095 PF13243 Squalene-hopene cyclase C-terminal domain LFE_RS09095 PF13249 Squalene-hopene cyclase N-terminal domain LFE_RS09115 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFE_RS09120 PF00005 ABC transporter LFE_RS09140 PF00923 Transaldolase/Fructose-6-phosphate aldolase LFE_RS09145 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LFE_RS09145 PF09363 XFP C-terminal domain LFE_RS09145 PF09364 XFP N-terminal domain LFE_RS09150 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LFE_RS09150 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFE_RS09160 PF02594 Uncharacterised ACR, YggU family COG1872 LFE_RS09170 PF02325 YGGT family LFE_RS09175 PF03807 NADP oxidoreductase coenzyme F420-dependent LFE_RS09175 PF14748 Pyrroline-5-carboxylate reductase dimerisation LFE_RS09180 PF01168 Alanine racemase, N-terminal domain LFE_RS09185 PF02578 Multi-copper polyphenol oxidoreductase laccase LFE_RS09190 PF00091 Tubulin/FtsZ family, GTPase domain LFE_RS09190 PF12327 FtsZ family, C-terminal domain LFE_RS09195 PF02491 SHS2 domain inserted in FTSA LFE_RS09205 PF01820 D-ala D-ala ligase N-terminus LFE_RS09205 PF07478 D-ala D-ala ligase C-terminus LFE_RS09210 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LFE_RS09210 PF01565 FAD binding domain LFE_RS09215 PF02875 Mur ligase family, glutamate ligase domain LFE_RS09215 PF01225 Mur ligase family, catalytic domain LFE_RS09215 PF08245 Mur ligase middle domain LFE_RS09220 PF03033 Glycosyltransferase family 28 N-terminal domain LFE_RS09220 PF04101 Glycosyltransferase family 28 C-terminal domain LFE_RS09225 PF01098 Cell cycle protein LFE_RS09230 PF02875 Mur ligase family, glutamate ligase domain LFE_RS09230 PF08245 Mur ligase middle domain LFE_RS09235 PF00953 Glycosyl transferase family 4 LFE_RS09235 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LFE_RS09240 PF01225 Mur ligase family, catalytic domain LFE_RS09240 PF02875 Mur ligase family, glutamate ligase domain LFE_RS09240 PF08245 Mur ligase middle domain LFE_RS09245 PF01225 Mur ligase family, catalytic domain LFE_RS09245 PF02875 Mur ligase family, glutamate ligase domain LFE_RS09245 PF08245 Mur ligase middle domain LFE_RS09250 PF00905 Penicillin binding protein transpeptidase domain LFE_RS09250 PF03717 Penicillin-binding Protein dimerisation domain LFE_RS09260 PF01795 MraW methylase family LFE_RS09265 PF02381 MraZ protein, putative antitoxin-like LFE_RS09280 PF10417 C-terminal domain of 1-Cys peroxiredoxin LFE_RS09280 PF00578 AhpC/TSA family LFE_RS09285 PF02629 CoA binding domain LFE_RS09285 PF00549 CoA-ligase LFE_RS09290 PF08442 ATP-grasp domain LFE_RS09290 PF00549 CoA-ligase LFE_RS09295 PF02910 Fumarate reductase flavoprotein C-term LFE_RS09295 PF00890 FAD binding domain LFE_RS09310 PF00285 Citrate synthase, C-terminal domain LFE_RS09315 PF00330 Aconitase family (aconitate hydratase) LFE_RS09320 PF02629 CoA binding domain LFE_RS09320 PF00549 CoA-ligase LFE_RS09325 PF00549 CoA-ligase LFE_RS09325 PF08442 ATP-grasp domain LFE_RS09335 PF12792 CSS motif domain associated with EAL LFE_RS09335 PF00563 EAL domain LFE_RS09340 PF05231 MASE1 LFE_RS09340 PF00563 EAL domain LFE_RS09345 PF12697 Alpha/beta hydrolase family LFE_RS09345 PF08241 Methyltransferase domain LFE_RS09350 PF03976 Polyphosphate kinase 2 (PPK2) LFE_RS09355 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LFE_RS09355 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LFE_RS09360 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFE_RS09360 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LFE_RS09365 PF00343 Carbohydrate phosphorylase LFE_RS09365 PF11897 Protein of unknown function (DUF3417) LFE_RS09370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LFE_RS09370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LFE_RS09370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LFE_RS09370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LFE_RS09375 PF01389 OmpA-like transmembrane domain LFE_RS09375 PF00691 OmpA family LFE_RS09390 PF00871 Acetokinase family LFE_RS09395 PF00920 Dehydratase family LFE_RS09415 PF00107 Zinc-binding dehydrogenase LFE_RS09415 PF08240 Alcohol dehydrogenase GroES-like domain LFE_RS09420 PF01747 ATP-sulfurylase LFE_RS09420 PF14306 PUA-like domain LFE_RS09430 PF00890 FAD binding domain LFE_RS09435 PF01300 Telomere recombination LFE_RS09435 PF03481 Putative GTP-binding controlling metal-binding LFE_RS09440 PF00158 Sigma-54 interaction domain LFE_RS09440 PF01590 GAF domain LFE_RS09450 PF00920 Dehydratase family LFE_RS09460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFE_RS09475 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) LFE_RS09480 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LFE_RS09480 PF00361 Proton-conducting membrane transporter LFE_RS09490 PF10057 Uncharacterized conserved protein (DUF2294) LFE_RS09495 PF10057 Uncharacterized conserved protein (DUF2294) LFE_RS09505 PF00484 Carbonic anhydrase LFE_RS09515 PF01595 Cyclin M transmembrane N-terminal domain LFE_RS09515 PF00571 CBS domain LFE_RS09515 PF03471 Transporter associated domain LFE_RS09530 PF02082 Transcriptional regulator LFE_RS09535 PF00266 Aminotransferase class-V LFE_RS09540 PF01592 NifU-like N terminal domain LFE_RS09545 PF01521 Iron-sulphur cluster biosynthesis LFE_RS09550 PF00226 DnaJ domain LFE_RS09550 PF07743 HSCB C-terminal oligomerisation domain LFE_RS09555 PF00012 Hsp70 protein LFE_RS09560 PF00111 2Fe-2S iron-sulfur cluster binding domain LFE_RS09565 PF04384 Iron-sulphur cluster assembly LFE_RS09575 PF01883 Iron-sulfur cluster assembly protein LFE_RS09575 PF10609 NUBPL iron-transfer P-loop NTPase LFE_RS09585 PF00293 NUDIX domain LFE_RS09590 PF01416 tRNA pseudouridine synthase LFE_RS09605 PF00672 HAMP domain LFE_RS09605 PF02743 Cache domain LFE_RS09605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFE_RS09615 PF03358 NADPH-dependent FMN reductase LFE_RS09620 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LFE_RS09620 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LFE_RS09625 PF02403 Seryl-tRNA synthetase N-terminal domain LFE_RS09625 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFE_RS09645 PF16360 GTP-binding GTPase Middle Region LFE_RS09645 PF13167 GTP-binding GTPase N-terminal LFE_RS09645 PF01926 50S ribosome-binding GTPase LFE_RS09665 PF05193 Peptidase M16 inactive domain LFE_RS09665 PF00675 Insulinase (Peptidase family M16) LFE_RS09670 PF05193 Peptidase M16 inactive domain LFE_RS09680 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS09680 PF00563 EAL domain LFE_RS09680 PF03707 Bacterial signalling protein N terminal repeat LFE_RS09690 PF00113 Enolase, C-terminal TIM barrel domain LFE_RS09690 PF03952 Enolase, N-terminal domain LFE_RS09705 PF02637 GatB domain LFE_RS09705 PF02934 GatB/GatE catalytic domain LFE_RS09710 PF01425 Amidase LFE_RS09715 PF02261 Aspartate decarboxylase LFE_RS09720 PF02686 Glu-tRNAGln amidotransferase C subunit LFE_RS09725 PF00580 UvrD/REP helicase N-terminal domain LFE_RS09725 PF13361 UvrD-like helicase C-terminal domain LFE_RS09735 PF00132 Bacterial transferase hexapeptide (six repeats) LFE_RS09735 PF12804 MobA-like NTP transferase domain LFE_RS09745 PF00970 Oxidoreductase FAD-binding domain LFE_RS09745 PF00042 Globin LFE_RS09745 PF00175 Oxidoreductase NAD-binding domain LFE_RS09755 PF04343 Protein of unknown function, DUF488 LFE_RS09765 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LFE_RS09775 PF07681 DoxX LFE_RS09780 PF01047 MarR family LFE_RS09785 PF02223 Thymidylate kinase LFE_RS09790 PF09115 DNA polymerase III, delta subunit, C terminal LFE_RS09795 PF04468 PSP1 C-terminal conserved region LFE_RS09800 PF01588 Putative tRNA binding domain LFE_RS09800 PF09334 tRNA synthetases class I (M) LFE_RS09800 PF08264 Anticodon-binding domain of tRNA LFE_RS09805 PF01026 TatD related DNase LFE_RS09815 PF13520 Amino acid permease LFE_RS09840 PF13520 Amino acid permease LFE_RS09845 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFE_RS09860 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal LFE_RS09860 PF01926 50S ribosome-binding GTPase LFE_RS09865 PF02896 PEP-utilising enzyme, TIM barrel domain LFE_RS09865 PF00391 PEP-utilising enzyme, mobile domain LFE_RS09865 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain LFE_RS09870 PF02954 Bacterial regulatory protein, Fis family LFE_RS09870 PF00072 Response regulator receiver domain LFE_RS09870 PF00158 Sigma-54 interaction domain LFE_RS09885 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase LFE_RS09885 PF00534 Glycosyl transferases group 1 LFE_RS09895 PF13360 PQQ-like domain LFE_RS09895 PF01011 PQQ enzyme repeat LFE_RS09895 PF13570 PQQ-like domain LFE_RS09925 PF00551 Formyl transferase LFE_RS09930 PF02769 AIR synthase related protein, C-terminal domain LFE_RS09930 PF00586 AIR synthase related protein, N-terminal domain LFE_RS09950 PF00035 Double-stranded RNA binding motif LFE_RS09950 PF14622 Ribonuclease-III-like LFE_RS09955 PF00109 Beta-ketoacyl synthase, N-terminal domain LFE_RS09955 PF02801 Beta-ketoacyl synthase, C-terminal domain LFE_RS09960 PF00550 Phosphopantetheine attachment site LFE_RS09970 PF00698 Acyl transferase domain LFE_RS09975 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LFE_RS09975 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LFE_RS09980 PF02504 Fatty acid synthesis protein LFE_RS09985 PF01783 Ribosomal L32p protein family LFE_RS09995 PF04073 Aminoacyl-tRNA editing domain LFE_RS09995 PF03129 Anticodon binding domain LFE_RS09995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LFE_RS10000 PF04551 GcpE protein LFE_RS10005 PF17820 PDZ domain LFE_RS10005 PF02163 Peptidase family M50 LFE_RS10010 PF13288 DXP reductoisomerase C-terminal domain LFE_RS10010 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain LFE_RS10010 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase LFE_RS10020 PF01255 Putative undecaprenyl diphosphate synthase LFE_RS10030 PF01268 Formate--tetrahydrofolate ligase LFE_RS10035 PF00902 Sec-independent protein translocase protein (TatC) LFE_RS10055 PF18073 Rubredoxin metal binding domain LFE_RS10070 PF01523 Putative modulator of DNA gyrase LFE_RS10075 PF01523 Putative modulator of DNA gyrase LFE_RS10090 PF01593 Flavin containing amine oxidoreductase LFE_RS10105 PF02633 Creatinine amidohydrolase LFE_RS10190 PF05973 Phage derived protein Gp49-like (DUF891) LFE_RS10195 PF00872 Transposase, Mutator family LFE_RS10210 PF02678 Pirin LFE_RS10210 PF17954 Quercetinase C-terminal cupin domain LFE_RS10255 PF00563 EAL domain LFE_RS10255 PF03707 Bacterial signalling protein N terminal repeat LFE_RS10255 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS10275 PF00300 Histidine phosphatase superfamily (branch 1) LFE_RS10285 PF00270 DEAD/DEAH box helicase LFE_RS10285 PF00271 Helicase conserved C-terminal domain LFE_RS10290 PF07722 Peptidase C26 LFE_RS10295 PF01177 Asp/Glu/Hydantoin racemase LFE_RS10300 PF01915 Glycosyl hydrolase family 3 C-terminal domain LFE_RS10300 PF00933 Glycosyl hydrolase family 3 N terminal domain LFE_RS10305 PF01725 Ham1 family LFE_RS10310 PF01138 3' exoribonuclease family, domain 1 LFE_RS10310 PF03725 3' exoribonuclease family, domain 2 LFE_RS10315 PF16326 ABC transporter C-terminal domain LFE_RS10315 PF00005 ABC transporter LFE_RS10315 PF12848 ABC transporter LFE_RS10330 PF01479 S4 domain LFE_RS10330 PF00849 RNA pseudouridylate synthase LFE_RS10345 PF00075 RNase H LFE_RS10360 PF03979 Sigma-70 factor, region 1.1 LFE_RS10360 PF00140 Sigma-70 factor, region 1.2 LFE_RS10360 PF04539 Sigma-70 region 3 LFE_RS10360 PF04542 Sigma-70 region 2 LFE_RS10360 PF04545 Sigma-70, region 4 LFE_RS10360 PF04546 Sigma-70, non-essential region LFE_RS10365 PF08275 DNA primase catalytic core, N-terminal domain LFE_RS10365 PF01807 CHC2 zinc finger LFE_RS10370 PF09424 Yqey-like protein LFE_RS10375 PF01165 Ribosomal protein S21 LFE_RS10385 PF00216 Bacterial DNA-binding protein LFE_RS10390 PF01230 HIT domain LFE_RS10395 PF01502 Phosphoribosyl-AMP cyclohydrolase LFE_RS10395 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LFE_RS10400 PF00977 Histidine biosynthesis protein LFE_RS10405 PF00977 Histidine biosynthesis protein LFE_RS10410 PF00117 Glutamine amidotransferase class-I LFE_RS10415 PF00475 Imidazoleglycerol-phosphate dehydratase LFE_RS10420 PF00155 Aminotransferase class I and II LFE_RS10425 PF00815 Histidinol dehydrogenase LFE_RS10430 PF01634 ATP phosphoribosyltransferase LFE_RS10435 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LFE_RS10440 PF13847 Methyltransferase domain LFE_RS10440 PF17827 PrmC N-terminal domain LFE_RS10445 PF03462 PCRF domain LFE_RS10445 PF00472 RF-1 domain LFE_RS10450 PF01197 Ribosomal protein L31 LFE_RS10455 PF07497 Rho termination factor, RNA-binding domain LFE_RS10455 PF07498 Rho termination factor, N-terminal domain LFE_RS10455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LFE_RS10475 PF00850 Histone deacetylase domain LFE_RS10490 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain LFE_RS10505 PF00171 Aldehyde dehydrogenase family LFE_RS10515 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS10525 PF02511 Thymidylate synthase complementing protein LFE_RS10530 PF01895 PhoU domain LFE_RS10535 PF00005 ABC transporter LFE_RS10540 PF00528 Binding-protein-dependent transport system inner membrane component LFE_RS10545 PF00528 Binding-protein-dependent transport system inner membrane component LFE_RS10550 PF12849 PBP superfamily domain LFE_RS10555 PF00072 Response regulator receiver domain LFE_RS10555 PF00486 Transcriptional regulatory protein, C terminal LFE_RS10575 PF00709 Adenylosuccinate synthetase LFE_RS10580 PF06335 Protein of unknown function (DUF1054) LFE_RS10595 PF03109 ABC1 family LFE_RS10600 PF04002 RadC-like JAB domain LFE_RS10630 PF00905 Penicillin binding protein transpeptidase domain LFE_RS10630 PF14814 Bifunctional transglycosylase second domain LFE_RS10630 PF00912 Transglycosylase LFE_RS10640 PF02154 Flagellar motor switch protein FliM LFE_RS10640 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term LFE_RS10650 PF13426 PAS domain LFE_RS10650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain LFE_RS10650 PF08447 PAS fold LFE_RS10655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFE_RS10660 PF00005 ABC transporter LFE_RS10660 PF02687 FtsX-like permease family LFE_RS10660 PF12704 MacB-like periplasmic core domain LFE_RS10665 PF02687 FtsX-like permease family LFE_RS10665 PF12704 MacB-like periplasmic core domain LFE_RS10665 PF00005 ABC transporter LFE_RS10670 PF00719 Inorganic pyrophosphatase LFE_RS10675 PF03707 Bacterial signalling protein N terminal repeat LFE_RS10675 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS10675 PF00563 EAL domain LFE_RS10710 PF01075 Glycosyltransferase family 9 (heptosyltransferase) LFE_RS10725 PF00534 Glycosyl transferases group 1 LFE_RS10750 PF00669 Bacterial flagellin N-terminal helical region LFE_RS10750 PF00700 Bacterial flagellin C-terminal helical region LFE_RS10755 PF02623 FliW protein LFE_RS10760 PF02599 Global regulator protein family LFE_RS10770 PF00460 Flagella basal body rod protein LFE_RS10770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFE_RS10785 PF00700 Bacterial flagellin C-terminal helical region LFE_RS10785 PF00669 Bacterial flagellin N-terminal helical region LFE_RS10795 PF02119 Flagellar P-ring protein LFE_RS10810 PF00460 Flagella basal body rod protein LFE_RS10810 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFE_RS10815 PF06429 Flagellar basal body rod FlgEFG protein C-terminal LFE_RS10815 PF00460 Flagella basal body rod protein LFE_RS10825 PF13538 UvrD-like helicase C-terminal domain LFE_RS10830 PF01557 Fumarylacetoacetate (FAA) hydrolase family LFE_RS10835 PF01113 Dihydrodipicolinate reductase, N-terminus LFE_RS10835 PF05173 Dihydrodipicolinate reductase, C-terminus LFE_RS10840 PF00701 Dihydrodipicolinate synthetase family LFE_RS10850 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LFE_RS10850 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LFE_RS10860 PF00206 Lyase LFE_RS10860 PF14698 Argininosuccinate lyase C-terminal LFE_RS10865 PF00764 Arginosuccinate synthase LFE_RS10870 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LFE_RS10870 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LFE_RS10875 PF00202 Aminotransferase class-III LFE_RS10885 PF07690 Major Facilitator Superfamily LFE_RS10900 PF01040 UbiA prenyltransferase family LFE_RS10915 PF01209 ubiE/COQ5 methyltransferase family LFE_RS10945 PF02541 Ppx/GppA phosphatase family LFE_RS10955 PF02223 Thymidylate kinase LFE_RS10960 PF02223 Thymidylate kinase LFE_RS10970 PF02502 Ribose/Galactose Isomerase LFE_RS10975 PF00464 Serine hydroxymethyltransferase LFE_RS10980 PF03477 ATP cone domain LFE_RS10985 PF18319 PriA DNA helicase Cys-rich region (CRR) domain LFE_RS10985 PF18074 Primosomal protein N C-terminal domain LFE_RS10985 PF04851 Type III restriction enzyme, res subunit LFE_RS10985 PF00271 Helicase conserved C-terminal domain LFE_RS10985 PF17764 3′ DNA-binding domain (3′BD) LFE_RS10995 PF04820 Tryptophan halogenase LFE_RS11000 PF02683 Cytochrome C biogenesis protein transmembrane region LFE_RS11005 PF00085 Thioredoxin LFE_RS11010 PF00578 AhpC/TSA family LFE_RS11015 PF01578 Cytochrome C assembly protein LFE_RS11020 PF05140 ResB-like family LFE_RS11030 PF00005 ABC transporter LFE_RS11035 PF02405 Permease MlaE LFE_RS11040 PF00842 Alanine racemase, C-terminal domain LFE_RS11040 PF01168 Alanine racemase, N-terminal domain LFE_RS11045 PF01765 Ribosome recycling factor LFE_RS11050 PF00696 Amino acid kinase family LFE_RS11055 PF00889 Elongation factor TS LFE_RS11060 PF00318 Ribosomal protein S2 LFE_RS11065 PF01960 ArgJ family LFE_RS11070 PF02774 Semialdehyde dehydrogenase, dimerisation domain LFE_RS11070 PF01118 Semialdehyde dehydrogenase, NAD binding domain LFE_RS11075 PF00380 Ribosomal protein S9/S16 LFE_RS11080 PF00572 Ribosomal protein L13 LFE_RS11085 PF02310 B12 binding domain LFE_RS11085 PF04055 Radical SAM superfamily LFE_RS11090 PF00037 4Fe-4S binding domain LFE_RS11110 PF00575 S1 RNA binding domain LFE_RS11110 PF10150 Ribonuclease E/G family LFE_RS11115 PF01098 Cell cycle protein LFE_RS11120 PF03717 Penicillin-binding Protein dimerisation domain LFE_RS11120 PF00905 Penicillin binding protein transpeptidase domain LFE_RS11145 PF00834 Ribulose-phosphate 3 epimerase family LFE_RS11150 PF01435 Peptidase family M48 LFE_RS11155 PF02911 Formyl transferase, C-terminal domain LFE_RS11155 PF00551 Formyl transferase LFE_RS11160 PF01327 Polypeptide deformylase LFE_RS11170 PF02230 Phospholipase/Carboxylesterase LFE_RS11175 PF03190 Protein of unknown function, DUF255 LFE_RS11180 PF00690 Cation transporter/ATPase, N-terminus LFE_RS11180 PF00689 Cation transporting ATPase, C-terminus LFE_RS11205 PF01734 Patatin-like phospholipase LFE_RS11210 PF01791 DeoC/LacD family aldolase LFE_RS11245 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) LFE_RS11260 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFE_RS11285 PF02954 Bacterial regulatory protein, Fis family LFE_RS11285 PF00072 Response regulator receiver domain LFE_RS11285 PF00158 Sigma-54 interaction domain LFE_RS11290 PF01571 Aminomethyltransferase folate-binding domain LFE_RS11295 PF00873 AcrB/AcrD/AcrF family LFE_RS11300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion LFE_RS11310 PF00355 Rieske [2Fe-2S] domain LFE_RS11320 PF00483 Nucleotidyl transferase LFE_RS11330 PF09094 Domain of unknown function (DUF1925) LFE_RS11330 PF09095 Domain of unknown function (DUF1926) LFE_RS11330 PF03065 Glycosyl hydrolase family 57 LFE_RS11345 PF09210 Domain of unknown function (DUF1957) LFE_RS11345 PF03065 Glycosyl hydrolase family 57 LFE_RS11420 PF00557 Metallopeptidase family M24 LFE_RS11420 PF01321 Creatinase/Prolidase N-terminal domain LFE_RS11435 PF01380 SIS domain LFE_RS11440 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain LFE_RS11440 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain LFE_RS11440 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain LFE_RS11445 PF01370 NAD dependent epimerase/dehydratase family LFE_RS11450 PF02397 Bacterial sugar transferase LFE_RS11525 PF00534 Glycosyl transferases group 1 LFE_RS11525 PF13439 Glycosyltransferase Family 4 LFE_RS11540 PF03275 UDP-galactopyranose mutase LFE_RS11570 PF01522 Polysaccharide deacetylase LFE_RS11575 PF00534 Glycosyl transferases group 1 LFE_RS11575 PF13439 Glycosyltransferase Family 4 LFE_RS11595 PF13426 PAS domain LFE_RS11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS11595 PF00512 His Kinase A (phospho-acceptor) domain LFE_RS11595 PF13188 PAS domain LFE_RS11595 PF00989 PAS fold LFE_RS11610 PF02954 Bacterial regulatory protein, Fis family LFE_RS11610 PF00072 Response regulator receiver domain LFE_RS11610 PF00158 Sigma-54 interaction domain LFE_RS11620 PF00535 Glycosyl transferase family 2 LFE_RS11625 PF00535 Glycosyl transferase family 2 LFE_RS11640 PF00005 ABC transporter LFE_RS11640 PF00664 ABC transporter transmembrane region LFE_RS11645 PF00535 Glycosyl transferase family 2 LFE_RS11655 PF00899 ThiF family LFE_RS11685 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath LFE_RS11690 PF05638 Type VI secretion system effector, Hcp LFE_RS11700 PF05947 Type VI secretion system, TssF LFE_RS11710 PF10431 C-terminal, D2-small domain, of ClpB protein LFE_RS11710 PF00004 ATPase family associated with various cellular activities (AAA) LFE_RS11710 PF17871 AAA lid domain LFE_RS11710 PF07724 AAA domain (Cdc48 subfamily) LFE_RS11715 PF04717 Type VI secretion system, phage-baseplate injector LFE_RS11765 PF06744 Type VI secretion protein IcmF C-terminal LFE_RS11765 PF14331 ImcF-related N-terminal domain LFE_RS11765 PF06761 Intracellular multiplication and human macrophage-killing LFE_RS11805 PF07690 Major Facilitator Superfamily LFE_RS11815 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFE_RS11815 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFE_RS11830 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LFE_RS11830 PF00034 Cytochrome c LFE_RS11845 PF00158 Sigma-54 interaction domain LFE_RS11845 PF00072 Response regulator receiver domain LFE_RS11845 PF02954 Bacterial regulatory protein, Fis family LFE_RS11850 PF00072 Response regulator receiver domain LFE_RS11865 PF01734 Patatin-like phospholipase LFE_RS11870 PF00378 Enoyl-CoA hydratase/isomerase LFE_RS11885 PF00072 Response regulator receiver domain LFE_RS11900 PF00004 ATPase family associated with various cellular activities (AAA) LFE_RS11900 PF07724 AAA domain (Cdc48 subfamily) LFE_RS11900 PF17871 AAA lid domain LFE_RS11900 PF10431 C-terminal, D2-small domain, of ClpB protein LFE_RS11900 PF02861 Clp amino terminal domain, pathogenicity island component LFE_RS11910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LFE_RS11915 PF13442 Cytochrome C oxidase, cbb3-type, subunit III LFE_RS11920 PF00563 EAL domain LFE_RS11920 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS11920 PF03707 Bacterial signalling protein N terminal repeat LFE_RS11935 PF01556 DnaJ C terminal domain LFE_RS11935 PF00226 DnaJ domain LFE_RS11940 PF00890 FAD binding domain LFE_RS11940 PF02910 Fumarate reductase flavoprotein C-term LFE_RS11950 PF00749 tRNA synthetases class I (E and Q), catalytic domain LFE_RS11970 PF01741 Large-conductance mechanosensitive channel, MscL LFE_RS12000 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFE_RS12035 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LFE_RS12035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFE_RS12035 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase LFE_RS12035 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LFE_RS12035 PF10371 Domain of unknown function LFE_RS12040 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II LFE_RS12040 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg LFE_RS12045 PF00226 DnaJ domain LFE_RS12045 PF01556 DnaJ C terminal domain LFE_RS12045 PF00684 DnaJ central domain LFE_RS12055 PF00202 Aminotransferase class-III LFE_RS12060 PF13580 SIS domain LFE_RS12065 PF01467 Cytidylyltransferase-like LFE_RS12065 PF00294 pfkB family carbohydrate kinase LFE_RS12070 PF00271 Helicase conserved C-terminal domain LFE_RS12070 PF00270 DEAD/DEAH box helicase LFE_RS12070 PF03461 TRCF domain LFE_RS12070 PF02559 CarD-like/TRCF domain LFE_RS12070 PF17757 UvrB interaction domain LFE_RS12080 PF09312 SurA N-terminal domain LFE_RS12080 PF00639 PPIC-type PPIASE domain LFE_RS12085 PF00639 PPIC-type PPIASE domain LFE_RS12085 PF09312 SurA N-terminal domain LFE_RS12090 PF01926 50S ribosome-binding GTPase LFE_RS12135 PF00563 EAL domain LFE_RS12135 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS12135 PF03707 Bacterial signalling protein N terminal repeat LFE_RS12140 PF12419 SNF2 Helicase protein LFE_RS12140 PF00271 Helicase conserved C-terminal domain LFE_RS12140 PF00176 SNF2 family N-terminal domain LFE_RS12145 PF03707 Bacterial signalling protein N terminal repeat LFE_RS12145 PF00563 EAL domain LFE_RS12145 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS12165 PF06827 Zinc finger found in FPG and IleRS LFE_RS12165 PF00133 tRNA synthetases class I (I, L, M and V) LFE_RS12165 PF08264 Anticodon-binding domain of tRNA LFE_RS12170 PF01252 Signal peptidase (SPase) II LFE_RS12180 PF01479 S4 domain LFE_RS12180 PF00849 RNA pseudouridylate synthase LFE_RS12190 PF00348 Polyprenyl synthetase LFE_RS12205 PF00459 Inositol monophosphatase family LFE_RS12215 PF14010 Phosphoenolpyruvate carboxylase LFE_RS12225 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase LFE_RS12245 PF01206 Sulfurtransferase TusA LFE_RS12250 PF00035 Double-stranded RNA binding motif LFE_RS12250 PF14622 Ribonuclease-III-like LFE_RS12255 PF07733 Bacterial DNA polymerase III alpha NTPase domain LFE_RS12255 PF11490 DNA polymerase III polC-type N-terminus II LFE_RS12255 PF14480 DNA polymerase III polC-type N-terminus I LFE_RS12255 PF02811 PHP domain LFE_RS12255 PF14579 Helix-hairpin-helix motif LFE_RS12255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain LFE_RS12255 PF00929 Exonuclease LFE_RS12270 PF17762 HTH domain found in ParB protein LFE_RS12270 PF02195 ParB-like nuclease domain LFE_RS12275 PF13614 AAA domain LFE_RS12285 PF13932 GidA associated domain LFE_RS12285 PF01134 Glucose inhibited division protein A LFE_RS12290 PF10396 GTP-binding protein TrmE N-terminus LFE_RS12290 PF01926 50S ribosome-binding GTPase LFE_RS12290 PF12631 MnmE helical domain LFE_RS12295 PF02096 60Kd inner membrane protein LFE_RS12295 PF14849 YidC periplasmic domain LFE_RS12300 PF00825 Ribonuclease P LFE_RS12305 PF01281 Ribosomal protein L9, N-terminal domain LFE_RS12305 PF03948 Ribosomal protein L9, C-terminal domain LFE_RS12330 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family LFE_RS12335 PF00148 Nitrogenase component 1 type Oxidoreductase LFE_RS12340 PF00148 Nitrogenase component 1 type Oxidoreductase LFE_RS12340 PF11844 Domain of unknown function (DUF3364) LFE_RS12345 PF04324 BFD-like [2Fe-2S] binding domain LFE_RS12345 PF00148 Nitrogenase component 1 type Oxidoreductase LFE_RS12350 PF00148 Nitrogenase component 1 type Oxidoreductase LFE_RS12355 PF02579 Dinitrogenase iron-molybdenum cofactor LFE_RS12360 PF03270 Protein of unknown function, DUF269 LFE_RS12365 PF02579 Dinitrogenase iron-molybdenum cofactor LFE_RS12365 PF04055 Radical SAM superfamily LFE_RS12375 PF01521 Iron-sulphur cluster biosynthesis LFE_RS12390 PF00266 Aminotransferase class-V LFE_RS12395 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family LFE_RS12405 PF04319 NifZ domain LFE_RS12415 PF06988 NifT/FixU protein LFE_RS12430 PF12838 4Fe-4S dicluster domain LFE_RS12435 PF03206 Nitrogen fixation protein NifW LFE_RS12440 PF00543 Nitrogen regulatory protein P-II LFE_RS12445 PF00543 Nitrogen regulatory protein P-II LFE_RS12450 PF03861 ANTAR domain LFE_RS12450 PF08376 Nitrate and nitrite sensing LFE_RS12460 PF00682 HMGL-like LFE_RS12465 PF00899 ThiF family LFE_RS12475 PF00528 Binding-protein-dependent transport system inner membrane component LFE_RS12490 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFE_RS12490 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal LFE_RS12495 PF00374 Nickel-dependent hydrogenase LFE_RS12500 PF01292 Prokaryotic cytochrome b561 LFE_RS12505 PF01750 Hydrogenase maturation protease LFE_RS12525 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA LFE_RS12530 PF02492 CobW/HypB/UreG, nucleotide-binding domain LFE_RS12535 PF07503 HypF finger LFE_RS12535 PF01300 Telomere recombination LFE_RS12535 PF00708 Acylphosphatase LFE_RS12535 PF17788 HypF Kae1-like domain LFE_RS12540 PF01455 HupF/HypC family LFE_RS12545 PF01924 Hydrogenase formation hypA family LFE_RS12550 PF00586 AIR synthase related protein, N-terminal domain LFE_RS12550 PF02769 AIR synthase related protein, C-terminal domain LFE_RS12565 PF01888 CbiD LFE_RS12570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFE_RS12575 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFE_RS12580 PF01890 Cobalamin synthesis G C-terminus LFE_RS12580 PF11760 Cobalamin synthesis G N-terminal LFE_RS12580 PF11761 Cobalamin biosynthesis central region LFE_RS12585 PF01914 MarC family integral membrane protein LFE_RS12590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFE_RS12590 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LFE_RS12595 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP LFE_RS12600 PF01327 Polypeptide deformylase LFE_RS12625 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LFE_RS12635 PF02683 Cytochrome C biogenesis protein transmembrane region LFE_RS12635 PF17991 Thioredoxin like C-terminal domain LFE_RS12635 PF00578 AhpC/TSA family LFE_RS12640 PF00361 Proton-conducting membrane transporter LFE_RS12655 PF00361 Proton-conducting membrane transporter LFE_RS12660 PF00374 Nickel-dependent hydrogenase LFE_RS12660 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit LFE_RS12660 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit LFE_RS12665 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit LFE_RS12670 PF03707 Bacterial signalling protein N terminal repeat LFE_RS12670 PF00563 EAL domain LFE_RS12670 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS12685 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain LFE_RS12685 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain LFE_RS12700 PF01842 ACT domain LFE_RS12700 PF00551 Formyl transferase LFE_RS12705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LFE_RS12720 PF02445 Quinolinate synthetase A protein LFE_RS12725 PF01118 Semialdehyde dehydrogenase, NAD binding domain LFE_RS12725 PF02774 Semialdehyde dehydrogenase, dimerisation domain LFE_RS12730 PF00180 Isocitrate/isopropylmalate dehydrogenase LFE_RS12735 PF00682 HMGL-like LFE_RS12735 PF08502 LeuA allosteric (dimerisation) domain LFE_RS12740 PF01066 CDP-alcohol phosphatidyltransferase LFE_RS12745 PF02666 Phosphatidylserine decarboxylase LFE_RS12750 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LFE_RS12750 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain LFE_RS12755 PF10369 Small subunit of acetolactate synthase LFE_RS12755 PF01842 ACT domain LFE_RS12760 PF00205 Thiamine pyrophosphate enzyme, central domain LFE_RS12760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LFE_RS12760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LFE_RS12770 PF00072 Response regulator receiver domain LFE_RS12770 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS12775 PF14824 Sirohaem biosynthesis protein central LFE_RS12775 PF10414 Sirohaem synthase dimerisation region LFE_RS12775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LFE_RS12780 PF01476 LysM domain LFE_RS12780 PF08525 Opacity-associated protein A N-terminal motif LFE_RS12780 PF01551 Peptidase family M23 LFE_RS12785 PF08543 Phosphomethylpyrimidine kinase LFE_RS12790 PF08448 PAS fold LFE_RS12790 PF13426 PAS domain LFE_RS12790 PF08447 PAS fold LFE_RS12790 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS12790 PF00563 EAL domain LFE_RS12790 PF05231 MASE1 LFE_RS12800 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS12800 PF03707 Bacterial signalling protein N terminal repeat LFE_RS12800 PF00563 EAL domain LFE_RS12810 PF11871 Domain of unknown function (DUF3391) LFE_RS12810 PF01966 HD domain LFE_RS12815 PF00633 Helix-hairpin-helix motif LFE_RS12815 PF00730 HhH-GPD superfamily base excision DNA repair protein LFE_RS12815 PF14815 NUDIX domain LFE_RS12825 PF04715 Anthranilate synthase component I, N terminal region LFE_RS12825 PF00425 chorismate binding enzyme LFE_RS12830 PF01909 Nucleotidyltransferase domain LFE_RS12850 PF00563 EAL domain LFE_RS12850 PF03707 Bacterial signalling protein N terminal repeat LFE_RS12850 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS12885 PF04324 BFD-like [2Fe-2S] binding domain LFE_RS12885 PF18267 Rubredoxin NAD+ reductase C-terminal domain LFE_RS12885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain LFE_RS12885 PF01077 Nitrite and sulphite reductase 4Fe-4S domain LFE_RS12885 PF07992 Pyridine nucleotide-disulphide oxidoreductase LFE_RS12890 PF00543 Nitrogen regulatory protein P-II LFE_RS12940 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS12945 PF03707 Bacterial signalling protein N terminal repeat LFE_RS12945 PF00563 EAL domain LFE_RS12945 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS12950 PF04002 RadC-like JAB domain LFE_RS12955 PF11734 TilS substrate C-terminal domain LFE_RS12955 PF09179 TilS substrate binding domain LFE_RS12955 PF01171 PP-loop family LFE_RS12965 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE LFE_RS12970 PF17151 Periplasmic sensor domain LFE_RS12970 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS12980 PF01551 Peptidase family M23 LFE_RS12985 PF01569 PAP2 superfamily LFE_RS13000 PF00892 EamA-like transporter family LFE_RS13005 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LFE_RS13015 PF04539 Sigma-70 region 3 LFE_RS13015 PF04545 Sigma-70, region 4 LFE_RS13015 PF04542 Sigma-70 region 2 LFE_RS13015 PF03979 Sigma-70 factor, region 1.1 LFE_RS13015 PF00140 Sigma-70 factor, region 1.2 LFE_RS13025 PF00563 EAL domain LFE_RS13025 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS13025 PF03707 Bacterial signalling protein N terminal repeat LFE_RS13030 PF01812 5-formyltetrahydrofolate cyclo-ligase family LFE_RS13035 PF02082 Transcriptional regulator LFE_RS13045 PF01029 NusB family LFE_RS13050 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS13050 PF17151 Periplasmic sensor domain LFE_RS13055 PF01112 Asparaginase LFE_RS13060 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS13060 PF03707 Bacterial signalling protein N terminal repeat LFE_RS13060 PF00563 EAL domain LFE_RS13065 PF01520 N-acetylmuramoyl-L-alanine amidase LFE_RS13065 PF11741 AMIN domain LFE_RS13075 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LFE_RS13075 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LFE_RS13085 PF01348 Type II intron maturase LFE_RS13085 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LFE_RS13120 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) LFE_RS13130 PF00672 HAMP domain LFE_RS13130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS13130 PF00512 His Kinase A (phospho-acceptor) domain LFE_RS13130 PF01627 Hpt domain LFE_RS13130 PF00072 Response regulator receiver domain LFE_RS13130 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) LFE_RS13140 PF02570 Precorrin-8X methylmutase LFE_RS13150 PF03099 Biotin/lipoate A/B protein ligase family LFE_RS13150 PF02237 Biotin protein ligase C terminal domain LFE_RS13150 PF08279 HTH domain LFE_RS13155 PF05239 PRC-barrel domain LFE_RS13155 PF01782 RimM N-terminal domain LFE_RS13165 PF00196 Bacterial regulatory proteins, luxR family LFE_RS13165 PF03472 Autoinducer binding domain LFE_RS13175 PF01966 HD domain LFE_RS13175 PF07698 7TM receptor with intracellular HD hydrolase LFE_RS13175 PF07697 7TM-HD extracellular LFE_RS13180 PF11967 Recombination protein O N terminal LFE_RS13180 PF02565 Recombination protein O C terminal LFE_RS13185 PF04434 SWIM zinc finger LFE_RS13185 PF00271 Helicase conserved C-terminal domain LFE_RS13185 PF00176 SNF2 family N-terminal domain LFE_RS13190 PF01551 Peptidase family M23 LFE_RS13190 PF04225 Opacity-associated protein A LysM-like domain LFE_RS13195 PF13742 OB-fold nucleic acid binding domain LFE_RS13195 PF02601 Exonuclease VII, large subunit LFE_RS13210 PF00563 EAL domain LFE_RS13210 PF03707 Bacterial signalling protein N terminal repeat LFE_RS13210 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS13235 PF00814 Glycoprotease family LFE_RS13240 PF03641 Possible lysine decarboxylase LFE_RS13245 PF02016 LD-carboxypeptidase N-terminal domain LFE_RS13245 PF17676 LD-carboxypeptidase C-terminal domain LFE_RS13250 PF13419 Haloacid dehalogenase-like hydrolase LFE_RS13260 PF01464 Transglycosylase SLT domain LFE_RS13260 PF10145 Phage-related minor tail protein LFE_RS13260 PF01551 Peptidase family M23 LFE_RS13270 PF12323 Helix-turn-helix domain LFE_RS13270 PF07282 Putative transposase DNA-binding domain LFE_RS13270 PF01385 Probable transposase LFE_RS13275 PF01966 HD domain LFE_RS13275 PF00072 Response regulator receiver domain LFE_RS13280 PF03707 Bacterial signalling protein N terminal repeat LFE_RS13280 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS13280 PF00563 EAL domain LFE_RS13285 PF00563 EAL domain LFE_RS13285 PF03707 Bacterial signalling protein N terminal repeat LFE_RS13285 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS13295 PF00361 Proton-conducting membrane transporter LFE_RS13295 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus LFE_RS13305 PF00196 Bacterial regulatory proteins, luxR family LFE_RS13310 PF01451 Low molecular weight phosphotyrosine protein phosphatase LFE_RS13320 PF01451 Low molecular weight phosphotyrosine protein phosphatase LFE_RS13325 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS13325 PF00563 EAL domain LFE_RS13325 PF03707 Bacterial signalling protein N terminal repeat LFE_RS13330 PF00512 His Kinase A (phospho-acceptor) domain LFE_RS13330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS13330 PF01590 GAF domain LFE_RS13330 PF08446 PAS fold LFE_RS13330 PF00360 Phytochrome region LFE_RS13335 PF00072 Response regulator receiver domain LFE_RS13335 PF00512 His Kinase A (phospho-acceptor) domain LFE_RS13335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LFE_RS13335 PF01627 Hpt domain LFE_RS13340 PF00563 EAL domain LFE_RS13340 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS13340 PF03707 Bacterial signalling protein N terminal repeat LFE_RS13345 PF00691 OmpA family LFE_RS13360 PF12804 MobA-like NTP transferase domain LFE_RS13360 PF00132 Bacterial transferase hexapeptide (six repeats) LFE_RS13365 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LFE_RS13365 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LFE_RS13365 PF06827 Zinc finger found in FPG and IleRS LFE_RS13370 PF00990 Diguanylate cyclase, GGDEF domain LFE_RS13370 PF00563 EAL domain LFE_RS13370 PF03707 Bacterial signalling protein N terminal repeat LFE_RS13375 PF02527 rRNA small subunit methyltransferase G LFE_RS13380 PF00005 ABC transporter LFE_RS13380 PF03459 TOBE domain