AMK43_RS00100	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
AMK43_RS00100	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMK43_RS00115	PWY-6339	syringate degradation
AMK43_RS00125	PWY-6339	syringate degradation
AMK43_RS00180	PWY-6898	thiamin salvage III
AMK43_RS00180	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
AMK43_RS00180	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
AMK43_RS00180	PWY-7356	thiamin salvage IV (yeast)
AMK43_RS00235	PWY-1042	glycolysis IV (plant cytosol)
AMK43_RS00235	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK43_RS00235	PWY-6901	superpathway of glucose and xylose degradation
AMK43_RS00235	PWY-7003	glycerol degradation to butanol
AMK43_RS00275	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK43_RS00275	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK43_RS00280	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMK43_RS00280	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMK43_RS00280	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMK43_RS00285	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK43_RS00285	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK43_RS00295	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMK43_RS00295	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMK43_RS00295	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMK43_RS00295	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMK43_RS00300	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK43_RS00300	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK43_RS00305	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK43_RS00305	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK43_RS00595	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
AMK43_RS00655	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMK43_RS00655	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AMK43_RS00655	PWY-6936	seleno-amino acid biosynthesis
AMK43_RS00655	PWY-702	L-methionine biosynthesis II
AMK43_RS00660	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMK43_RS00660	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AMK43_RS00660	PWY-6936	seleno-amino acid biosynthesis
AMK43_RS00660	PWY-702	L-methionine biosynthesis II
AMK43_RS00750	PWY-1622	formaldehyde assimilation I (serine pathway)
AMK43_RS00750	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK43_RS00755	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMK43_RS00755	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMK43_RS00760	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMK43_RS00760	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMK43_RS00760	PWY-5194	siroheme biosynthesis
AMK43_RS00760	PWY-5441	S-methyl-L-methionine cycle
AMK43_RS00760	PWY-702	L-methionine biosynthesis II
AMK43_RS00760	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMK43_RS00770	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMK43_RS00770	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMK43_RS00770	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMK43_RS00785	PWY-5381	pyridine nucleotide cycling (plants)
AMK43_RS00790	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMK43_RS00790	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMK43_RS00790	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMK43_RS00795	PWY-5194	siroheme biosynthesis
AMK43_RS00795	PWY-5441	S-methyl-L-methionine cycle
AMK43_RS00795	PWY-702	L-methionine biosynthesis II
AMK43_RS00795	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMK43_RS00800	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMK43_RS00800	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
AMK43_RS00805	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMK43_RS00840	PWY-2201	folate transformations I
AMK43_RS00840	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMK43_RS00850	PWY-2201	folate transformations I
AMK43_RS00850	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMK43_RS00870	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMK43_RS00870	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMK43_RS00875	PWY-5194	siroheme biosynthesis
AMK43_RS00875	PWY-5441	S-methyl-L-methionine cycle
AMK43_RS00875	PWY-702	L-methionine biosynthesis II
AMK43_RS00875	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMK43_RS00885	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMK43_RS00890	PWY-5194	siroheme biosynthesis
AMK43_RS00890	PWY-5441	S-methyl-L-methionine cycle
AMK43_RS00890	PWY-702	L-methionine biosynthesis II
AMK43_RS00890	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
AMK43_RS00995	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMK43_RS00995	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMK43_RS00995	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMK43_RS01020	PWY-6167	flavin biosynthesis II (archaea)
AMK43_RS01020	PWY-6168	flavin biosynthesis III (fungi)
AMK43_RS01025	PWY-5525	D-glucuronate degradation I
AMK43_RS01030	PWY-6167	flavin biosynthesis II (archaea)
AMK43_RS01030	PWY-6168	flavin biosynthesis III (fungi)
AMK43_RS01030	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK43_RS01035	PWY-6167	flavin biosynthesis II (archaea)
AMK43_RS01035	PWY-6168	flavin biosynthesis III (fungi)
AMK43_RS01035	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
AMK43_RS01045	PWY-6823	molybdenum cofactor biosynthesis
AMK43_RS01045	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK43_RS01045	PWY-6892	thiazole biosynthesis I (E. coli)
AMK43_RS01045	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMK43_RS01085	PWY-5480	pyruvate fermentation to ethanol I
AMK43_RS01085	PWY-5485	pyruvate fermentation to acetate IV
AMK43_RS01085	PWY-5493	reductive monocarboxylic acid cycle
AMK43_RS01095	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMK43_RS01095	PWY-5723	Rubisco shunt
AMK43_RS01135	PWY-2201	folate transformations I
AMK43_RS01135	PWY-3841	folate transformations II
AMK43_RS01155	PWY-6502	oxidized GTP and dGTP detoxification
AMK43_RS01230	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK43_RS01245	PWY-3821	galactose degradation III
AMK43_RS01245	PWY-6317	galactose degradation I (Leloir pathway)
AMK43_RS01245	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
AMK43_RS01245	PWY-6527	stachyose degradation
AMK43_RS01245	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
AMK43_RS01245	PWY-7344	UDP-D-galactose biosynthesis
AMK43_RS01315	PWY-6348	phosphate acquisition
AMK43_RS01350	PWY-2201	folate transformations I
AMK43_RS01395	PWY-2201	folate transformations I
AMK43_RS01505	PWY-1042	glycolysis IV (plant cytosol)
AMK43_RS01505	PWY-1622	formaldehyde assimilation I (serine pathway)
AMK43_RS01505	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMK43_RS01505	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK43_RS01505	PWY-5723	Rubisco shunt
AMK43_RS01505	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK43_RS01505	PWY-6886	1-butanol autotrophic biosynthesis
AMK43_RS01505	PWY-6901	superpathway of glucose and xylose degradation
AMK43_RS01505	PWY-7003	glycerol degradation to butanol
AMK43_RS01505	PWY-7124	ethylene biosynthesis V (engineered)
AMK43_RS01505	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMK43_RS01660	PWY-5958	acridone alkaloid biosynthesis
AMK43_RS01660	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMK43_RS01660	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMK43_RS01665	PWY-5958	acridone alkaloid biosynthesis
AMK43_RS01665	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
AMK43_RS01665	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
AMK43_RS01685	PWY-6906	chitin derivatives degradation
AMK43_RS01685	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AMK43_RS01685	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AMK43_RS01700	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK43_RS01700	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK43_RS01745	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
AMK43_RS01750	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
AMK43_RS01785	PWY-6749	CMP-legionaminate biosynthesis I
AMK43_RS01795	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMK43_RS01915	PWY-3821	galactose degradation III
AMK43_RS01915	PWY-6174	mevalonate pathway II (archaea)
AMK43_RS01915	PWY-6317	galactose degradation I (Leloir pathway)
AMK43_RS01915	PWY-6527	stachyose degradation
AMK43_RS01915	PWY-7391	isoprene biosynthesis II (engineered)
AMK43_RS01915	PWY-922	mevalonate pathway I
AMK43_RS01920	PWY-7391	isoprene biosynthesis II (engineered)
AMK43_RS01920	PWY-922	mevalonate pathway I
AMK43_RS01925	PWY-7391	isoprene biosynthesis II (engineered)
AMK43_RS01925	PWY-922	mevalonate pathway I
AMK43_RS01930	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
AMK43_RS01930	PWY-6174	mevalonate pathway II (archaea)
AMK43_RS01930	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
AMK43_RS01930	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
AMK43_RS01930	PWY-7102	bisabolene biosynthesis
AMK43_RS01930	PWY-7391	isoprene biosynthesis II (engineered)
AMK43_RS01930	PWY-7524	mevalonate pathway III (archaea)
AMK43_RS01930	PWY-7560	methylerythritol phosphate pathway II
AMK43_RS01930	PWY-922	mevalonate pathway I
AMK43_RS02000	PWY-5839	menaquinol-7 biosynthesis
AMK43_RS02000	PWY-5844	menaquinol-9 biosynthesis
AMK43_RS02000	PWY-5849	menaquinol-6 biosynthesis
AMK43_RS02000	PWY-5890	menaquinol-10 biosynthesis
AMK43_RS02000	PWY-5891	menaquinol-11 biosynthesis
AMK43_RS02000	PWY-5892	menaquinol-12 biosynthesis
AMK43_RS02000	PWY-5895	menaquinol-13 biosynthesis
AMK43_RS02005	PWY-3821	galactose degradation III
AMK43_RS02005	PWY-6317	galactose degradation I (Leloir pathway)
AMK43_RS02005	PWY-6527	stachyose degradation
AMK43_RS02010	PWY-6317	galactose degradation I (Leloir pathway)
AMK43_RS02015	PWY-6317	galactose degradation I (Leloir pathway)
AMK43_RS02015	PWY-6527	stachyose degradation
AMK43_RS02025	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMK43_RS02025	PWY-6549	L-glutamine biosynthesis III
AMK43_RS02025	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMK43_RS02025	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMK43_RS02040	PWY-1622	formaldehyde assimilation I (serine pathway)
AMK43_RS02040	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMK43_RS02040	PWY-5913	TCA cycle VI (obligate autotrophs)
AMK43_RS02040	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK43_RS02040	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
AMK43_RS02040	PWY-6549	L-glutamine biosynthesis III
AMK43_RS02040	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMK43_RS02040	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMK43_RS02040	PWY-7124	ethylene biosynthesis V (engineered)
AMK43_RS02110	PWY-6749	CMP-legionaminate biosynthesis I
AMK43_RS02215	PWY-6478	GDP-D-<i>glycero</i>-&alpha;-D-<i>manno</i>-heptose biosynthesis
AMK43_RS02260	PWY-723	alkylnitronates degradation
AMK43_RS02345	PWY-1042	glycolysis IV (plant cytosol)
AMK43_RS02345	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK43_RS02345	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK43_RS02345	PWY-7003	glycerol degradation to butanol
AMK43_RS02490	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK43_RS02490	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK43_RS02490	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK43_RS02490	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
AMK43_RS02490	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMK43_RS02490	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMK43_RS02685	PWY-2161	folate polyglutamylation
AMK43_RS02715	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
AMK43_RS02715	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
AMK43_RS02835	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMK43_RS02840	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AMK43_RS02885	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMK43_RS02950	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
AMK43_RS02950	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
AMK43_RS02955	PWY-2201	folate transformations I
AMK43_RS02955	PWY-3841	folate transformations II
AMK43_RS02990	PWY-2781	<i>cis</i>-zeatin biosynthesis
AMK43_RS03020	PWY-7193	pyrimidine ribonucleosides salvage I
AMK43_RS03085	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMK43_RS03085	PWY-622	starch biosynthesis
AMK43_RS03185	PWY-6823	molybdenum cofactor biosynthesis
AMK43_RS03185	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK43_RS03185	PWY-6892	thiazole biosynthesis I (E. coli)
AMK43_RS03185	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMK43_RS03265	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMK43_RS03295	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
AMK43_RS03295	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
AMK43_RS03295	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
AMK43_RS03320	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK43_RS03320	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK43_RS03560	PWY-5941	glycogen degradation II (eukaryotic)
AMK43_RS03560	PWY-6724	starch degradation II
AMK43_RS03560	PWY-6737	starch degradation V
AMK43_RS03560	PWY-7238	sucrose biosynthesis II
AMK43_RS03565	PWY-5941	glycogen degradation II (eukaryotic)
AMK43_RS03565	PWY-6731	starch degradation III
AMK43_RS03565	PWY-6737	starch degradation V
AMK43_RS03565	PWY-7238	sucrose biosynthesis II
AMK43_RS03765	PWY-6749	CMP-legionaminate biosynthesis I
AMK43_RS03780	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AMK43_RS03780	PWY-6153	autoinducer AI-2 biosynthesis I
AMK43_RS03780	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AMK43_RS03820	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMK43_RS03820	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMK43_RS03825	PWY-6832	2-aminoethylphosphonate degradation II
AMK43_RS03890	PWY-6749	CMP-legionaminate biosynthesis I
AMK43_RS04095	PWY-7039	phosphatidate metabolism, as a signaling molecule
AMK43_RS04155	PWY-6174	mevalonate pathway II (archaea)
AMK43_RS04155	PWY-7391	isoprene biosynthesis II (engineered)
AMK43_RS04155	PWY-7524	mevalonate pathway III (archaea)
AMK43_RS04155	PWY-922	mevalonate pathway I
AMK43_RS04160	PWY-6174	mevalonate pathway II (archaea)
AMK43_RS04160	PWY-7391	isoprene biosynthesis II (engineered)
AMK43_RS04160	PWY-7524	mevalonate pathway III (archaea)
AMK43_RS04160	PWY-7571	ferrichrome A biosynthesis
AMK43_RS04160	PWY-922	mevalonate pathway I
AMK43_RS04230	PWY-6807	xyloglucan degradation II (exoglucanase)
AMK43_RS04340	PWY-6807	xyloglucan degradation II (exoglucanase)
AMK43_RS04345	PWY-2941	L-lysine biosynthesis II
AMK43_RS04345	PWY-2942	L-lysine biosynthesis III
AMK43_RS04345	PWY-5097	L-lysine biosynthesis VI
AMK43_RS04350	PWY-2941	L-lysine biosynthesis II
AMK43_RS04370	PWY-5667	CDP-diacylglycerol biosynthesis I
AMK43_RS04370	PWY-5981	CDP-diacylglycerol biosynthesis III
AMK43_RS04370	PWY-6453	stigma estolide biosynthesis
AMK43_RS04370	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
AMK43_RS04370	PWY-7417	phospholipid remodeling (phosphatidate, yeast)
AMK43_RS04370	PWY-7587	oleate biosynthesis III (cyanobacteria)
AMK43_RS04370	PWY-7589	palmitoleate biosynthesis III (cyanobacteria)
AMK43_RS04375	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMK43_RS04380	PWY-7206	pyrimidine deoxyribonucleotides dephosphorylation
AMK43_RS04390	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK43_RS04390	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK43_RS04390	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK43_RS04390	PWY-6113	superpathway of mycolate biosynthesis
AMK43_RS04390	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK43_RS04390	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK43_RS04390	PWY-7663	gondoate biosynthesis (anaerobic)
AMK43_RS04390	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK43_RS04390	PWYG-321	mycolate biosynthesis
AMK43_RS04525	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
AMK43_RS04525	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK43_RS04525	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
AMK43_RS04525	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
AMK43_RS04580	PWY-5508	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide II
AMK43_RS04580	PWY-5509	adenosylcobalamin biosynthesis from cobyrinate <i>a,c</i>-diamide I
AMK43_RS04580	PWY-6268	adenosylcobalamin salvage from cobalamin
AMK43_RS04580	PWY-6269	adenosylcobalamin salvage from cobinamide II
AMK43_RS04725	PWY-5686	UMP biosynthesis
AMK43_RS04770	PWY-6823	molybdenum cofactor biosynthesis
AMK43_RS04805	PWY-101	photosynthesis light reactions
AMK43_RS04805	PWY-7230	ubiquinol-6 biosynthesis from 4-aminobenzoate (eukaryotic)
AMK43_RS04830	PWY-5659	GDP-mannose biosynthesis
AMK43_RS04830	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AMK43_RS04870	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
AMK43_RS04870	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMK43_RS04880	PWY-6683	sulfate reduction III (assimilatory)
AMK43_RS04975	PWY-702	L-methionine biosynthesis II
AMK43_RS04980	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMK43_RS04990	PWY-5686	UMP biosynthesis
AMK43_RS05000	PWY-5686	UMP biosynthesis
AMK43_RS05005	PWY-5686	UMP biosynthesis
AMK43_RS05010	PWY-5686	UMP biosynthesis
AMK43_RS05185	PWY-2201	folate transformations I
AMK43_RS05225	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK43_RS05230	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK43_RS05420	PWY-4381	fatty acid biosynthesis initiation I
AMK43_RS05430	PWY-4381	fatty acid biosynthesis initiation I
AMK43_RS05430	PWY-6799	fatty acid biosynthesis (plant mitochondria)
AMK43_RS05430	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK43_RS05575	PWY-5269	cardiolipin biosynthesis II
AMK43_RS05575	PWY-5668	cardiolipin biosynthesis I
AMK43_RS05590	PWY-5941	glycogen degradation II (eukaryotic)
AMK43_RS05590	PWY-6731	starch degradation III
AMK43_RS05590	PWY-6737	starch degradation V
AMK43_RS05590	PWY-7238	sucrose biosynthesis II
AMK43_RS05615	PWY-6825	phosphatidylcholine biosynthesis V
AMK43_RS05625	PWY-6823	molybdenum cofactor biosynthesis
AMK43_RS05625	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK43_RS05625	PWY-6892	thiazole biosynthesis I (E. coli)
AMK43_RS05625	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMK43_RS05790	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
AMK43_RS05790	PWY-6167	flavin biosynthesis II (archaea)
AMK43_RS05790	PWY-6168	flavin biosynthesis III (fungi)
AMK43_RS05795	PWY-6938	NADH repair
AMK43_RS05970	PWY-4981	L-proline biosynthesis II (from arginine)
AMK43_RS05970	PWY-4984	urea cycle
AMK43_RS05970	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK43_RS05975	PWY-4981	L-proline biosynthesis II (from arginine)
AMK43_RS06130	PWY-6825	phosphatidylcholine biosynthesis V
AMK43_RS06140	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
AMK43_RS06155	PWY-6854	ethylene biosynthesis III (microbes)
AMK43_RS06175	PWY-2201	folate transformations I
AMK43_RS06195	PWY-5667	CDP-diacylglycerol biosynthesis I
AMK43_RS06195	PWY-5981	CDP-diacylglycerol biosynthesis III
AMK43_RS06210	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
AMK43_RS06210	PWY-622	starch biosynthesis
AMK43_RS06225	PWY-5971	palmitate biosynthesis II (bacteria and plants)
AMK43_RS06225	PWY-5973	<i>cis</i>-vaccenate biosynthesis
AMK43_RS06225	PWY-5989	stearate biosynthesis II (bacteria and plants)
AMK43_RS06225	PWY-5994	palmitate biosynthesis I (animals and fungi)
AMK43_RS06225	PWY-6113	superpathway of mycolate biosynthesis
AMK43_RS06225	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
AMK43_RS06225	PWY-6519	8-amino-7-oxononanoate biosynthesis I
AMK43_RS06225	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK43_RS06225	PWY-7663	gondoate biosynthesis (anaerobic)
AMK43_RS06225	PWY-7664	oleate biosynthesis IV (anaerobic)
AMK43_RS06225	PWYG-321	mycolate biosynthesis
AMK43_RS06230	PWY-2201	folate transformations I
AMK43_RS06230	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK43_RS06260	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK43_RS06260	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK43_RS06260	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMK43_RS06260	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMK43_RS06260	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK43_RS06260	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK43_RS06260	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK43_RS06260	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMK43_RS06295	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
AMK43_RS06295	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK43_RS06295	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMK43_RS06295	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMK43_RS06295	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK43_RS06295	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK43_RS06295	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK43_RS06295	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
AMK43_RS06310	PWY-2201	folate transformations I
AMK43_RS06310	PWY-3841	folate transformations II
AMK43_RS06510	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK43_RS06510	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK43_RS06510	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK43_RS06540	PWY-6123	inosine-5'-phosphate biosynthesis I
AMK43_RS06540	PWY-6124	inosine-5'-phosphate biosynthesis II
AMK43_RS06540	PWY-7234	inosine-5'-phosphate biosynthesis III
AMK43_RS06545	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK43_RS06545	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AMK43_RS06550	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK43_RS06550	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK43_RS06550	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK43_RS06555	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK43_RS06555	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK43_RS06555	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK43_RS06555	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMK43_RS06560	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
AMK43_RS06560	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
AMK43_RS06560	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
AMK43_RS06560	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
AMK43_RS06565	PWY-6123	inosine-5'-phosphate biosynthesis I
AMK43_RS06565	PWY-6124	inosine-5'-phosphate biosynthesis II
AMK43_RS06565	PWY-7234	inosine-5'-phosphate biosynthesis III
AMK43_RS06570	PWY-6123	inosine-5'-phosphate biosynthesis I
AMK43_RS06570	PWY-7234	inosine-5'-phosphate biosynthesis III
AMK43_RS06580	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK43_RS06605	PWY-2941	L-lysine biosynthesis II
AMK43_RS06605	PWY-2942	L-lysine biosynthesis III
AMK43_RS06605	PWY-5097	L-lysine biosynthesis VI
AMK43_RS06605	PWY-6559	spermidine biosynthesis II
AMK43_RS06605	PWY-6562	norspermidine biosynthesis
AMK43_RS06605	PWY-7153	grixazone biosynthesis
AMK43_RS06660	PWY-6019	pseudouridine degradation
AMK43_RS06670	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMK43_RS06670	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
AMK43_RS06680	PWY-1042	glycolysis IV (plant cytosol)
AMK43_RS06680	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMK43_RS06680	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK43_RS06680	PWY-5723	Rubisco shunt
AMK43_RS06680	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK43_RS06680	PWY-6886	1-butanol autotrophic biosynthesis
AMK43_RS06680	PWY-6901	superpathway of glucose and xylose degradation
AMK43_RS06680	PWY-7003	glycerol degradation to butanol
AMK43_RS06680	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMK43_RS06680	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMK43_RS06685	PWY-1042	glycolysis IV (plant cytosol)
AMK43_RS06685	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMK43_RS06685	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK43_RS06685	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMK43_RS06750	PWY-6599	guanine and guanosine salvage II
AMK43_RS06750	PWY-6609	adenine and adenosine salvage III
AMK43_RS06750	PWY-6610	adenine and adenosine salvage IV
AMK43_RS06750	PWY-6620	guanine and guanosine salvage
AMK43_RS06765	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMK43_RS06765	PWY-5723	Rubisco shunt
AMK43_RS06785	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
AMK43_RS06785	PWY-7177	UTP and CTP dephosphorylation II
AMK43_RS06785	PWY-7185	UTP and CTP dephosphorylation I
AMK43_RS06790	PWY-1042	glycolysis IV (plant cytosol)
AMK43_RS06790	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
AMK43_RS06790	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK43_RS06790	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK43_RS06790	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMK43_RS06800	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AMK43_RS06830	PWY-381	nitrate reduction II (assimilatory)
AMK43_RS06830	PWY-5675	nitrate reduction V (assimilatory)
AMK43_RS06830	PWY-6549	L-glutamine biosynthesis III
AMK43_RS06830	PWY-6963	ammonia assimilation cycle I
AMK43_RS06830	PWY-6964	ammonia assimilation cycle II
AMK43_RS07055	PWY-7675	Kdo transfer to lipid IV<sub>A</sub> II
AMK43_RS07065	PWY-7205	CMP phosphorylation
AMK43_RS07130	PWY-3841	folate transformations II
AMK43_RS07130	PWY-6614	tetrahydrofolate biosynthesis
AMK43_RS07135	PWY-3841	folate transformations II
AMK43_RS07135	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
AMK43_RS07135	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK43_RS07135	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
AMK43_RS07135	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMK43_RS07135	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
AMK43_RS07140	PWY-6004	glycine betaine biosynthesis V (from glycine)
AMK43_RS07170	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK43_RS07180	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK43_RS07220	PWY-6556	pyrimidine ribonucleosides salvage II
AMK43_RS07220	PWY-7181	pyrimidine deoxyribonucleosides degradation
AMK43_RS07220	PWY-7193	pyrimidine ribonucleosides salvage I
AMK43_RS07220	PWY-7199	pyrimidine deoxyribonucleosides salvage
AMK43_RS07225	PWY-4202	arsenate detoxification I (glutaredoxin)
AMK43_RS07225	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMK43_RS07225	PWY-6608	guanosine nucleotides degradation III
AMK43_RS07225	PWY-6609	adenine and adenosine salvage III
AMK43_RS07225	PWY-6611	adenine and adenosine salvage V
AMK43_RS07225	PWY-6620	guanine and guanosine salvage
AMK43_RS07225	PWY-6627	salinosporamide A biosynthesis
AMK43_RS07225	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
AMK43_RS07225	PWY-7179	purine deoxyribonucleosides degradation I
AMK43_RS07225	PWY-7179-1	purine deoxyribonucleosides degradation
AMK43_RS07245	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AMK43_RS07265	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
AMK43_RS07290	PWY-7181	pyrimidine deoxyribonucleosides degradation
AMK43_RS07415	PWY-6936	seleno-amino acid biosynthesis
AMK43_RS07425	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AMK43_RS07425	PWY-2161	folate polyglutamylation
AMK43_RS07425	PWY-2201	folate transformations I
AMK43_RS07425	PWY-3841	folate transformations II
AMK43_RS07530	PWY-6123	inosine-5'-phosphate biosynthesis I
AMK43_RS07530	PWY-6124	inosine-5'-phosphate biosynthesis II
AMK43_RS07530	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK43_RS07530	PWY-7234	inosine-5'-phosphate biosynthesis III
AMK43_RS07540	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK43_RS07545	PWY-6599	guanine and guanosine salvage II
AMK43_RS07545	PWY-6609	adenine and adenosine salvage III
AMK43_RS07545	PWY-6610	adenine and adenosine salvage IV
AMK43_RS07545	PWY-6620	guanine and guanosine salvage
AMK43_RS07565	PWY-622	starch biosynthesis
AMK43_RS07570	PWY-622	starch biosynthesis
AMK43_RS07585	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK43_RS07585	PWY-6416	quinate degradation II
AMK43_RS07585	PWY-6707	gallate biosynthesis
AMK43_RS07590	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK43_RS07610	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK43_RS07620	PWY-3461	L-tyrosine biosynthesis II
AMK43_RS07620	PWY-3462	L-phenylalanine biosynthesis II
AMK43_RS07620	PWY-6120	L-tyrosine biosynthesis III
AMK43_RS07620	PWY-6627	salinosporamide A biosynthesis
AMK43_RS07620	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
AMK43_RS07620	PWY-7626	bacilysin biosynthesis
AMK43_RS07630	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMK43_RS07630	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMK43_RS07630	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMK43_RS07630	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMK43_RS07670	PWY-2941	L-lysine biosynthesis II
AMK43_RS07670	PWY-2942	L-lysine biosynthesis III
AMK43_RS07670	PWY-5097	L-lysine biosynthesis VI
AMK43_RS07670	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
AMK43_RS07670	PWY-6559	spermidine biosynthesis II
AMK43_RS07670	PWY-6562	norspermidine biosynthesis
AMK43_RS07670	PWY-7153	grixazone biosynthesis
AMK43_RS07670	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
AMK43_RS07675	PWY-2941	L-lysine biosynthesis II
AMK43_RS07675	PWY-2942	L-lysine biosynthesis III
AMK43_RS07675	PWY-5097	L-lysine biosynthesis VI
AMK43_RS07680	PWY-2941	L-lysine biosynthesis II
AMK43_RS07680	PWY-5097	L-lysine biosynthesis VI
AMK43_RS07685	PWY-2941	L-lysine biosynthesis II
AMK43_RS07685	PWY-2942	L-lysine biosynthesis III
AMK43_RS07685	PWY-5097	L-lysine biosynthesis VI
AMK43_RS07685	PWY-6559	spermidine biosynthesis II
AMK43_RS07685	PWY-6562	norspermidine biosynthesis
AMK43_RS07685	PWY-7153	grixazone biosynthesis
AMK43_RS07690	PWY-2941	L-lysine biosynthesis II
AMK43_RS07690	PWY-2942	L-lysine biosynthesis III
AMK43_RS07690	PWY-5097	L-lysine biosynthesis VI
AMK43_RS07735	PWY-1622	formaldehyde assimilation I (serine pathway)
AMK43_RS07735	PWY-181	photorespiration
AMK43_RS07735	PWY-2161	folate polyglutamylation
AMK43_RS07735	PWY-2201	folate transformations I
AMK43_RS07735	PWY-3661	glycine betaine degradation I
AMK43_RS07735	PWY-3661-1	glycine betaine degradation II (mammalian)
AMK43_RS07735	PWY-3841	folate transformations II
AMK43_RS07735	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK43_RS07875	PWY-4381	fatty acid biosynthesis initiation I
AMK43_RS07875	PWY-5743	3-hydroxypropanoate cycle
AMK43_RS07875	PWY-5744	glyoxylate assimilation
AMK43_RS07875	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMK43_RS07875	PWY-6679	jadomycin biosynthesis
AMK43_RS07875	PWY-6722	candicidin biosynthesis
AMK43_RS07875	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK43_RS07880	PWY-4381	fatty acid biosynthesis initiation I
AMK43_RS07880	PWY-5743	3-hydroxypropanoate cycle
AMK43_RS07880	PWY-5744	glyoxylate assimilation
AMK43_RS07880	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
AMK43_RS07880	PWY-6679	jadomycin biosynthesis
AMK43_RS07880	PWY-6722	candicidin biosynthesis
AMK43_RS07880	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
AMK43_RS07915	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
AMK43_RS07970	PWY-5103	L-isoleucine biosynthesis III
AMK43_RS07970	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK43_RS07985	PWY-7396	butanol and isobutanol biosynthesis (engineered)
AMK43_RS08025	PWY-4381	fatty acid biosynthesis initiation I
AMK43_RS08045	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMK43_RS08045	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
AMK43_RS08045	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
AMK43_RS08045	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMK43_RS08055	PWY-5129	sphingolipid biosynthesis (plants)
AMK43_RS08085	PWY-6871	3-methylbutanol biosynthesis
AMK43_RS08090	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK43_RS08090	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK43_RS08100	PWY-5101	L-isoleucine biosynthesis II
AMK43_RS08100	PWY-5103	L-isoleucine biosynthesis III
AMK43_RS08100	PWY-5104	L-isoleucine biosynthesis IV
AMK43_RS08100	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AMK43_RS08100	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AMK43_RS08100	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AMK43_RS08100	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK43_RS08105	PWY-5101	L-isoleucine biosynthesis II
AMK43_RS08105	PWY-5103	L-isoleucine biosynthesis III
AMK43_RS08105	PWY-5104	L-isoleucine biosynthesis IV
AMK43_RS08105	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
AMK43_RS08105	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
AMK43_RS08105	PWY-6389	(<i>S</i>)-acetoin biosynthesis
AMK43_RS08105	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK43_RS08115	PWY-5101	L-isoleucine biosynthesis II
AMK43_RS08115	PWY-5103	L-isoleucine biosynthesis III
AMK43_RS08115	PWY-5104	L-isoleucine biosynthesis IV
AMK43_RS08115	PWY-7111	pyruvate fermentation to isobutanol (engineered)
AMK43_RS08130	PWY-5198	factor 420 biosynthesis
AMK43_RS08145	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMK43_RS08145	PWY-6596	adenosine nucleotides degradation I
AMK43_RS08145	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMK43_RS08230	PWY-2722	trehalose degradation IV
AMK43_RS08230	PWY-2723	trehalose degradation V
AMK43_RS08230	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMK43_RS08230	PWY-5661	GDP-glucose biosynthesis
AMK43_RS08230	PWY-621	sucrose degradation III (sucrose invertase)
AMK43_RS08230	PWY-7238	sucrose biosynthesis II
AMK43_RS08230	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMK43_RS08320	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK43_RS08320	PWY-6892	thiazole biosynthesis I (E. coli)
AMK43_RS08320	PWY-7560	methylerythritol phosphate pathway II
AMK43_RS08345	PWY-5480	pyruvate fermentation to ethanol I
AMK43_RS08345	PWY-5485	pyruvate fermentation to acetate IV
AMK43_RS08345	PWY-5493	reductive monocarboxylic acid cycle
AMK43_RS08355	PWY-3961	phosphopantothenate biosynthesis II
AMK43_RS08385	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK43_RS08390	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
AMK43_RS08405	PWY-6164	3-dehydroquinate biosynthesis I
AMK43_RS08415	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
AMK43_RS08420	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMK43_RS08420	PWY-6164	3-dehydroquinate biosynthesis I
AMK43_RS08420	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMK43_RS08455	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMK43_RS08455	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
AMK43_RS08535	PWY-7533	gliotoxin biosynthesis
AMK43_RS08595	PWY-723	alkylnitronates degradation
AMK43_RS08685	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK43_RS08685	PWY-6892	thiazole biosynthesis I (E. coli)
AMK43_RS08685	PWY-7560	methylerythritol phosphate pathway II
AMK43_RS08695	PWY-3341	L-proline biosynthesis III
AMK43_RS08695	PWY-4981	L-proline biosynthesis II (from arginine)
AMK43_RS08695	PWY-6344	L-ornithine degradation II (Stickland reaction)
AMK43_RS08700	PWY-3341	L-proline biosynthesis III
AMK43_RS08700	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMK43_RS08705	PWY-3341	L-proline biosynthesis III
AMK43_RS08705	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
AMK43_RS08715	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
AMK43_RS08720	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
AMK43_RS08720	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
AMK43_RS08720	PWY-7717	AMK43_RS08720
AMK43_RS08720	PWY-7733	AMK43_RS08720
AMK43_RS08720	PWY-7734	AMK43_RS08720
AMK43_RS08725	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
AMK43_RS08725	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
AMK43_RS08820	PWY-6825	phosphatidylcholine biosynthesis V
AMK43_RS08830	PWY-6700	queuosine biosynthesis
AMK43_RS08855	PWY-1042	glycolysis IV (plant cytosol)
AMK43_RS08855	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
AMK43_RS08855	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK43_RS08855	PWY-5723	Rubisco shunt
AMK43_RS08855	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK43_RS08855	PWY-6886	1-butanol autotrophic biosynthesis
AMK43_RS08855	PWY-6901	superpathway of glucose and xylose degradation
AMK43_RS08855	PWY-7003	glycerol degradation to butanol
AMK43_RS08855	PWY-7124	ethylene biosynthesis V (engineered)
AMK43_RS08855	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
AMK43_RS09010	PWY-4261	glycerol degradation I
AMK43_RS09015	PWY-6906	chitin derivatives degradation
AMK43_RS09015	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
AMK43_RS09015	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
AMK43_RS09020	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMK43_RS09020	PWY-6855	chitin degradation I (archaea)
AMK43_RS09020	PWY-6906	chitin derivatives degradation
AMK43_RS09150	PWY-6823	molybdenum cofactor biosynthesis
AMK43_RS09150	PWY-6891	thiazole biosynthesis II (Bacillus)
AMK43_RS09150	PWY-6892	thiazole biosynthesis I (E. coli)
AMK43_RS09150	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
AMK43_RS09205	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AMK43_RS09205	PWY-5368	dimorphecolate biosynthesis
AMK43_RS09205	PWY-5995	linoleate biosynthesis I (plants)
AMK43_RS09205	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AMK43_RS09205	PWY-6803	phosphatidylcholine acyl editing
AMK43_RS09205	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AMK43_RS09205	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMK43_RS09205	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMK43_RS09205	PWY-7470	phosphatidylcholine biosynthesis VII
AMK43_RS09205	PWY-7618	ricinoleate biosynthesis
AMK43_RS09255	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMK43_RS09255	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AMK43_RS09255	PWY-6936	seleno-amino acid biosynthesis
AMK43_RS09255	PWY-702	L-methionine biosynthesis II
AMK43_RS09260	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
AMK43_RS09260	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AMK43_RS09260	PWY-6936	seleno-amino acid biosynthesis
AMK43_RS09260	PWY-702	L-methionine biosynthesis II
AMK43_RS09340	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
AMK43_RS09530	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
AMK43_RS09730	PWY-4381	fatty acid biosynthesis initiation I
AMK43_RS09855	PWY-6700	queuosine biosynthesis
AMK43_RS09865	PWY-6605	adenine and adenosine salvage II
AMK43_RS09865	PWY-6610	adenine and adenosine salvage IV
AMK43_RS09885	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
AMK43_RS09885	PWY-2201	folate transformations I
AMK43_RS09885	PWY-3841	folate transformations II
AMK43_RS09885	PWY-5030	L-histidine degradation III
AMK43_RS09885	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK43_RS09885	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
AMK43_RS10000	PWY-3861	mannitol degradation II
AMK43_RS10000	PWY-3881	mannitol biosynthesis
AMK43_RS10000	PWY-5659	GDP-mannose biosynthesis
AMK43_RS10000	PWY-6992	1,5-anhydrofructose degradation
AMK43_RS10000	PWY-7456	mannan degradation
AMK43_RS10000	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
AMK43_RS10000	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AMK43_RS10005	PWY-6936	seleno-amino acid biosynthesis
AMK43_RS10045	PWY-7183	pyrimidine nucleobases salvage I
AMK43_RS10055	PWY-5482	pyruvate fermentation to acetate II
AMK43_RS10055	PWY-5485	pyruvate fermentation to acetate IV
AMK43_RS10055	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK43_RS10060	PWY-1281	sulfoacetaldehyde degradation I
AMK43_RS10060	PWY-5482	pyruvate fermentation to acetate II
AMK43_RS10060	PWY-5485	pyruvate fermentation to acetate IV
AMK43_RS10060	PWY-5497	purine nucleobases degradation II (anaerobic)
AMK43_RS10060	PWY-6637	sulfolactate degradation II
AMK43_RS10070	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
AMK43_RS10070	PWY-5368	dimorphecolate biosynthesis
AMK43_RS10070	PWY-5995	linoleate biosynthesis I (plants)
AMK43_RS10070	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
AMK43_RS10070	PWY-6803	phosphatidylcholine acyl editing
AMK43_RS10070	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
AMK43_RS10070	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
AMK43_RS10070	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
AMK43_RS10070	PWY-7470	phosphatidylcholine biosynthesis VII
AMK43_RS10070	PWY-7618	ricinoleate biosynthesis
AMK43_RS10340	PWY-6825	phosphatidylcholine biosynthesis V
AMK43_RS10435	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK43_RS10435	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK43_RS10495	PWY-6012	acyl carrier protein metabolism I
AMK43_RS10495	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
AMK43_RS10520	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
AMK43_RS10520	PWY-6153	autoinducer AI-2 biosynthesis I
AMK43_RS10520	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
AMK43_RS10525	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
AMK43_RS10525	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
AMK43_RS10615	PWY-6936	seleno-amino acid biosynthesis
AMK43_RS10615	PWY-7274	D-cycloserine biosynthesis
AMK43_RS10620	PWY-6936	seleno-amino acid biosynthesis
AMK43_RS10635	PWY-5381	pyridine nucleotide cycling (plants)
AMK43_RS10635	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
AMK43_RS10635	PWY-6596	adenosine nucleotides degradation I
AMK43_RS10635	PWY-6606	guanosine nucleotides degradation II
AMK43_RS10635	PWY-6607	guanosine nucleotides degradation I
AMK43_RS10635	PWY-6608	guanosine nucleotides degradation III
AMK43_RS10635	PWY-7185	UTP and CTP dephosphorylation I
AMK43_RS10655	PWY-1042	glycolysis IV (plant cytosol)
AMK43_RS10655	PWY-5484	glycolysis II (from fructose 6-phosphate)
AMK43_RS10655	PWY-6886	1-butanol autotrophic biosynthesis
AMK43_RS10655	PWY-6901	superpathway of glucose and xylose degradation
AMK43_RS10655	PWY-7003	glycerol degradation to butanol
AMK43_RS10705	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
AMK43_RS10715	PWY-3801	sucrose degradation II (sucrose synthase)
AMK43_RS10715	PWY-5054	sorbitol biosynthesis I
AMK43_RS10715	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
AMK43_RS10715	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
AMK43_RS10715	PWY-5659	GDP-mannose biosynthesis
AMK43_RS10715	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
AMK43_RS10715	PWY-621	sucrose degradation III (sucrose invertase)
AMK43_RS10715	PWY-622	starch biosynthesis
AMK43_RS10715	PWY-6981	chitin biosynthesis
AMK43_RS10715	PWY-6992	1,5-anhydrofructose degradation
AMK43_RS10715	PWY-7238	sucrose biosynthesis II
AMK43_RS10715	PWY-7347	sucrose biosynthesis III
AMK43_RS10715	PWY-7385	1,3-propanediol biosynthesis (engineered)
AMK43_RS10760	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
AMK43_RS10765	PWY-6961	L-ascorbate degradation II (bacterial, aerobic)
AMK43_RS10770	PWY-5686	UMP biosynthesis
AMK43_RS10825	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
AMK43_RS10895	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK43_RS10895	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK43_RS10895	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
AMK43_RS10930	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
AMK43_RS11070	PWY-6749	CMP-legionaminate biosynthesis I
AMK43_RS11175	PWY-5738	GDP-6-deoxy-D-talose biosynthesis
AMK43_RS11175	PWY-5739	GDP-D-perosamine biosynthesis
AMK43_RS11175	PWY-5740	GDP-L-colitose biosynthesis
AMK43_RS11175	PWY-66	GDP-L-fucose biosynthesis I (from GDP-D-mannose)
AMK43_RS11175	PWY-7573	GDP-mycosamine biosynthesis
AMK43_RS11185	PWY-5659	GDP-mannose biosynthesis
AMK43_RS11185	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
AMK43_RS11200	PWY-3801	sucrose degradation II (sucrose synthase)
AMK43_RS11200	PWY-6527	stachyose degradation
AMK43_RS11200	PWY-7238	sucrose biosynthesis II
AMK43_RS11200	PWY-7343	UDP-glucose biosynthesis
AMK43_RS11405	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
