AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 Hamap MF_01347 ATP synthase subunit beta [atpB]. 2 462 57.487 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 4 462 1.5E-252 T 22-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 PANTHER PTHR15184:SF8 3 465 0.0 T 22-04-2016 AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 PANTHER PTHR15184 3 465 0.0 T 22-04-2016 AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 SUPERFAMILY SSF47917 347 462 8.63E-52 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 SMART SM00382 143 407 8.8E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 Gene3D G3DSA:3.40.50.300 77 346 1.9E-109 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 335 344 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 SUPERFAMILY SSF52540 78 349 6.95E-92 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 74 9.7E-19 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 Gene3D G3DSA:1.10.1140.10 347 463 1.8E-53 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 PIRSF PIRSF039072 2 465 5.7E-263 T 22-04-2016 AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 344 4.7E-68 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 SUPERFAMILY SSF50615 3 76 1.31E-23 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07170 83108ff0b59d31eda4015f1486f2b4d6 465 Gene3D G3DSA:2.40.10.170 3 76 1.1E-30 T 22-04-2016 AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 SUPERFAMILY SSF47644 610 693 1.83E-20 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 PANTHER PTHR21091 1 367 1.2E-106 T 22-04-2016 AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 Gene3D G3DSA:3.20.20.330 2 331 5.6E-101 T 22-04-2016 IPR003726 Homocysteine-binding domain AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 Pfam PF02574 Homocysteine S-methyltransferase 2 292 4.3E-77 T 22-04-2016 IPR003726 Homocysteine-binding domain AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 SMART SM01018 613 695 2.2E-33 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 Pfam PF00809 Pterin binding enzyme 328 561 6.2E-37 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 SUPERFAMILY SSF51717 325 590 4.84E-72 T 22-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 Gene3D G3DSA:3.20.20.20 332 598 1.4E-85 T 22-04-2016 IPR000489 Pterin-binding domain GO:0042558 AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 Gene3D G3DSA:3.40.50.280 698 839 3.8E-45 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 Gene3D G3DSA:1.10.1240.10 606 692 8.4E-26 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 Pfam PF02607 B12 binding domain 616 688 4.8E-20 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 PANTHER PTHR21091:SF97 1 367 1.2E-106 T 22-04-2016 AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 SUPERFAMILY SSF52242 697 825 4.06E-34 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 SUPERFAMILY SSF82282 2 367 1.83E-97 T 22-04-2016 IPR003726 Homocysteine-binding domain AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 Gene3D G3DSA:3.10.196.10 932 1142 4.4E-60 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 TIGRFAM TIGR02082 metH: methionine synthase 2 1142 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 932 1142 7.9E-45 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 SUPERFAMILY SSF56507 885 1142 5.36E-67 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 Pfam PF02310 B12 binding domain 701 798 1.1E-19 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMK43_RS06310 8fc05e298c55ef9082dcc55af40330a5 1142 PIRSF PIRSF000381 1 1142 0.0 T 22-04-2016 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0008898|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK43_RS09870 9a36d2eca25593d81b001357b473c0d3 150 SUPERFAMILY SSF55811 5 136 1.62E-27 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK43_RS09870 9a36d2eca25593d81b001357b473c0d3 150 Pfam PF00293 NUDIX domain 7 132 9.2E-19 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK43_RS09870 9a36d2eca25593d81b001357b473c0d3 150 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK43_RS09870 9a36d2eca25593d81b001357b473c0d3 150 PANTHER PTHR22769 4 129 1.8E-21 T 22-04-2016 AMK43_RS09870 9a36d2eca25593d81b001357b473c0d3 150 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.0E-6 T 22-04-2016 IPR020476 NUDIX hydrolase AMK43_RS09870 9a36d2eca25593d81b001357b473c0d3 150 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.0E-6 T 22-04-2016 IPR020476 NUDIX hydrolase AMK43_RS09870 9a36d2eca25593d81b001357b473c0d3 150 Gene3D G3DSA:3.90.79.10 5 139 1.8E-32 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 Pfam PF01926 50S ribosome-binding GTPase 4 129 4.5E-22 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 1 367 44.182 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 Gene3D G3DSA:3.10.20.30 268 367 3.8E-46 T 22-04-2016 IPR012675 Beta-grasp domain AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 Pfam PF06071 Protein of unknown function (DUF933) 283 366 8.0E-38 T 22-04-2016 IPR013029 Domain of unknown function DUF933 AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 5.2E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.2E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.2E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 5.2E-35 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 PANTHER PTHR23305 4 367 2.5E-192 T 22-04-2016 AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 SUPERFAMILY SSF52540 3 305 9.71E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 4 367 3.8E-151 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 PIRSF PIRSF006641 1 367 5.0E-155 T 22-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 PANTHER PTHR23305:SF12 4 367 2.5E-192 T 22-04-2016 AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 Gene3D G3DSA:3.40.50.300 201 267 6.7E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 Gene3D G3DSA:3.40.50.300 3 130 6.7E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 Gene3D G3DSA:1.10.150.300 131 200 2.3E-26 T 22-04-2016 IPR023192 TGS-like domain AMK43_RS05060 0a58c0065897459987ce20af60b63c24 367 SUPERFAMILY SSF81271 283 364 2.4E-34 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMK43_RS07925 eea34431c48aaaec28d82bee6a968744 409 Gene3D G3DSA:1.20.1640.10 191 393 2.0E-27 T 22-04-2016 AMK43_RS07925 eea34431c48aaaec28d82bee6a968744 409 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 396 38.373 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMK43_RS07925 eea34431c48aaaec28d82bee6a968744 409 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 144 373 5.9E-71 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK43_RS07925 eea34431c48aaaec28d82bee6a968744 409 SUPERFAMILY SSF82866 190 384 4.45E-36 T 22-04-2016 AMK43_RS07925 eea34431c48aaaec28d82bee6a968744 409 Pfam PF07549 SecD/SecF GG Motif 21 44 1.4E-5 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMK43_RS07925 eea34431c48aaaec28d82bee6a968744 409 PANTHER PTHR30081 1 409 2.6E-113 T 22-04-2016 AMK43_RS07925 eea34431c48aaaec28d82bee6a968744 409 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 119 380 1.3E-93 T 22-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 AMK43_RS07925 eea34431c48aaaec28d82bee6a968744 409 Pfam PF02355 Protein export membrane protein 212 381 6.8E-19 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMK43_RS07925 eea34431c48aaaec28d82bee6a968744 409 PANTHER PTHR30081:SF1 1 409 2.6E-113 T 22-04-2016 AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 Gene3D G3DSA:1.10.357.20 274 448 5.1E-56 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 Pfam PF00571 CBS domain 195 248 9.5E-6 T 22-04-2016 IPR000644 CBS domain AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 Pfam PF00571 CBS domain 131 188 4.6E-6 T 22-04-2016 IPR000644 CBS domain AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 Gene3D G3DSA:3.10.580.10 122 259 1.7E-26 T 22-04-2016 AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 SMART SM00116 202 250 2.0E-5 T 22-04-2016 IPR000644 CBS domain AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 TIGRFAM TIGR00400 mgtE: magnesium transporter 5 449 6.6E-132 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 SMART SM00924 27 131 3.5E-29 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 SUPERFAMILY SSF161093 275 447 4.58E-49 T 22-04-2016 AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 PANTHER PTHR11911 80 415 6.5E-40 T 22-04-2016 AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 Pfam PF01769 Divalent cation transporter 318 440 1.7E-28 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 SUPERFAMILY SSF54631 131 268 4.04E-30 T 22-04-2016 AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 Gene3D G3DSA:1.25.60.10 3 121 4.4E-26 T 22-04-2016 AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 SUPERFAMILY SSF158791 2 128 3.01E-26 T 22-04-2016 AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 PANTHER PTHR11911:SF23 80 415 6.5E-40 T 22-04-2016 AMK43_RS03485 bba22fc891000228b7ae58c72c818cc2 449 Pfam PF03448 MgtE intracellular N domain 30 129 1.7E-24 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Pfam PF04565 RNA polymerase Rpb2, domain 3 466 534 3.8E-29 T 22-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 SUPERFAMILY SSF64484 9 221 0.0 T 22-04-2016 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 SUPERFAMILY SSF64484 296 1144 0.0 T 22-04-2016 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Gene3D G3DSA:2.40.50.150 774 906 9.2E-58 T 22-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Pfam PF04560 RNA polymerase Rpb2, domain 7 1059 1134 2.8E-24 T 22-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Gene3D G3DSA:2.40.50.100 669 740 2.0E-26 T 22-04-2016 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Gene3D G3DSA:3.90.1100.10 18 146 1.1E-134 T 22-04-2016 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Gene3D G3DSA:3.90.1100.10 613 667 1.1E-134 T 22-04-2016 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Gene3D G3DSA:3.90.1100.10 398 545 1.1E-134 T 22-04-2016 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 8 1135 12.081 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Pfam PF00562 RNA polymerase Rpb2, domain 6 672 1057 5.1E-160 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Pfam PF10385 RNA polymerase beta subunit external 1 domain 546 610 3.8E-19 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 PANTHER PTHR20856 293 1139 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 PANTHER PTHR20856 1 225 0.0 T 22-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 PANTHER PTHR20856:SF20 293 1139 0.0 T 22-04-2016 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 PANTHER PTHR20856:SF20 1 225 0.0 T 22-04-2016 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 5 884 0.0 T 22-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Pfam PF04561 RNA polymerase Rpb2, domain 2 308 407 3.3E-14 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Gene3D G3DSA:2.40.270.10 741 767 9.1E-55 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Gene3D G3DSA:2.40.270.10 974 1035 4.6E-20 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Gene3D G3DSA:2.40.270.10 907 973 9.1E-55 T 22-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Gene3D G3DSA:3.90.1110.10 299 397 8.9E-57 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Gene3D G3DSA:3.90.1110.10 148 225 8.9E-57 T 22-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Gene3D G3DSA:2.30.150.10 546 610 1.2E-18 T 22-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 ProSitePatterns PS01166 RNA polymerases beta chain signature. 910 922 - T 22-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03250 da116b08fbb7f1d16e9128184cf25cec 1148 Pfam PF04563 RNA polymerase beta subunit 23 452 2.0E-21 T 22-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 PIRSF PIRSF005719 1 1176 4.6E-228 T 22-04-2016 IPR024704 Structural maintenance of chromosomes protein AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 Gene3D G3DSA:3.40.50.300 2 184 1.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 Gene3D G3DSA:3.40.50.300 259 264 1.8E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 Pfam PF02463 RecF/RecN/SMC N terminal domain 824 1164 2.5E-18 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 545 2.1E-27 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1175 19.281 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 Gene3D G3DSA:3.40.50.300 951 1174 2.9E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 SUPERFAMILY SSF75553 477 681 2.88E-40 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 SMART SM00968 519 634 1.1E-25 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1176 4.1E-251 T 22-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 PANTHER PTHR18937:SF251 1 1174 5.5E-173 T 22-04-2016 AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 SUPERFAMILY SSF52540 916 1169 3.91E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 SUPERFAMILY SSF52540 2 271 1.85E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 PANTHER PTHR18937 1 1174 5.5E-173 T 22-04-2016 AMK43_RS07375 d1536fcdf9865fdacaafa8f664d611c2 1176 Pfam PF06470 SMC proteins Flexible Hinge Domain 519 633 3.3E-23 T 22-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 AMK43_RS07070 c9f6d4163d4bc4717b9396971768bf6b 307 SUPERFAMILY SSF53335 93 302 2.69E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07070 c9f6d4163d4bc4717b9396971768bf6b 307 PIRSF PIRSF000401 1 306 1.8E-75 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AMK43_RS07070 c9f6d4163d4bc4717b9396971768bf6b 307 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 17 299 1.5E-57 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AMK43_RS07070 c9f6d4163d4bc4717b9396971768bf6b 307 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 16 304 3.0E-70 T 22-04-2016 AMK43_RS07070 c9f6d4163d4bc4717b9396971768bf6b 307 PANTHER PTHR18895 20 304 2.5E-58 T 22-04-2016 AMK43_RS07070 c9f6d4163d4bc4717b9396971768bf6b 307 PANTHER PTHR18895:SF3 20 304 2.5E-58 T 22-04-2016 AMK43_RS07070 c9f6d4163d4bc4717b9396971768bf6b 307 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 305 29.953 T 22-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 AMK43_RS07070 c9f6d4163d4bc4717b9396971768bf6b 307 Gene3D G3DSA:3.40.50.150 108 300 4.0E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS01370 d2b6d53ddd57a2de91b65ab256b84c1a 624 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 434 462 - T 22-04-2016 IPR001587 Ribonuclease J, conserved site AMK43_RS01370 d2b6d53ddd57a2de91b65ab256b84c1a 624 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 76 622 1.8E-189 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 AMK43_RS01370 d2b6d53ddd57a2de91b65ab256b84c1a 624 PANTHER PTHR11203 66 624 9.3E-223 T 22-04-2016 AMK43_RS01370 d2b6d53ddd57a2de91b65ab256b84c1a 624 SMART SM00849 87 285 2.0E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS01370 d2b6d53ddd57a2de91b65ab256b84c1a 624 Pfam PF00753 Metallo-beta-lactamase superfamily 86 163 1.8E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS01370 d2b6d53ddd57a2de91b65ab256b84c1a 624 PIRSF PIRSF004803 66 624 1.9E-224 T 22-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 AMK43_RS01370 d2b6d53ddd57a2de91b65ab256b84c1a 624 SUPERFAMILY SSF56281 77 494 5.42E-85 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS01370 d2b6d53ddd57a2de91b65ab256b84c1a 624 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 433 478 6.7E-8 T 22-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain AMK43_RS01370 d2b6d53ddd57a2de91b65ab256b84c1a 624 Hamap MF_01491 Ribonuclease J [rnj]. 70 624 43.717 T 22-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 AMK43_RS01370 d2b6d53ddd57a2de91b65ab256b84c1a 624 PANTHER PTHR11203:SF22 66 624 9.3E-223 T 22-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 AMK43_RS01370 d2b6d53ddd57a2de91b65ab256b84c1a 624 Gene3D G3DSA:3.60.15.10 71 326 9.0E-74 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS09280 80da90b8235593ef58d930787a8df69f 203 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 90 187 8.6E-10 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK43_RS09280 80da90b8235593ef58d930787a8df69f 203 PANTHER PTHR12725:SF63 1 202 2.7E-27 T 22-04-2016 AMK43_RS09280 80da90b8235593ef58d930787a8df69f 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 7.7E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK43_RS09280 80da90b8235593ef58d930787a8df69f 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 7.7E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK43_RS09280 80da90b8235593ef58d930787a8df69f 203 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 7.7E-5 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK43_RS09280 80da90b8235593ef58d930787a8df69f 203 Pfam PF13419 Haloacid dehalogenase-like hydrolase 76 186 1.3E-11 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS09280 80da90b8235593ef58d930787a8df69f 203 PANTHER PTHR12725 1 202 2.7E-27 T 22-04-2016 AMK43_RS09280 80da90b8235593ef58d930787a8df69f 203 Gene3D G3DSA:3.40.50.1000 6 201 2.2E-32 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS09280 80da90b8235593ef58d930787a8df69f 203 SUPERFAMILY SSF56784 8 198 1.78E-29 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS03620 817ed30515b4df4f8f3c49a4adc9ead4 329 Gene3D G3DSA:3.40.630.10 2 70 1.7E-38 T 22-04-2016 AMK43_RS03620 817ed30515b4df4f8f3c49a4adc9ead4 329 Gene3D G3DSA:3.40.630.10 151 325 1.7E-38 T 22-04-2016 AMK43_RS03620 817ed30515b4df4f8f3c49a4adc9ead4 329 PANTHER PTHR32481 2 328 2.0E-49 T 22-04-2016 AMK43_RS03620 817ed30515b4df4f8f3c49a4adc9ead4 329 SUPERFAMILY SSF101821 65 158 1.83E-13 T 22-04-2016 AMK43_RS03620 817ed30515b4df4f8f3c49a4adc9ead4 329 PIRSF PIRSF001123 1 328 1.6E-52 T 22-04-2016 IPR008007 Peptidase M42 AMK43_RS03620 817ed30515b4df4f8f3c49a4adc9ead4 329 PANTHER PTHR32481:SF0 2 328 2.0E-49 T 22-04-2016 AMK43_RS03620 817ed30515b4df4f8f3c49a4adc9ead4 329 SUPERFAMILY SSF53187 3 75 1.85E-29 T 22-04-2016 AMK43_RS03620 817ed30515b4df4f8f3c49a4adc9ead4 329 SUPERFAMILY SSF53187 151 322 1.85E-29 T 22-04-2016 AMK43_RS03620 817ed30515b4df4f8f3c49a4adc9ead4 329 Gene3D G3DSA:2.40.30.40 71 138 8.0E-11 T 22-04-2016 IPR023367 Peptidase M42, domain 2 AMK43_RS03620 817ed30515b4df4f8f3c49a4adc9ead4 329 Pfam PF05343 M42 glutamyl aminopeptidase 40 300 1.3E-35 T 22-04-2016 IPR008007 Peptidase M42 AMK43_RS05155 55f38db41292ca8fc63db47c3566b8bd 149 PIRSF PIRSF000239 1 149 5.7E-23 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 AMK43_RS05155 55f38db41292ca8fc63db47c3566b8bd 149 SUPERFAMILY SSF52833 2 146 1.76E-50 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS05155 55f38db41292ca8fc63db47c3566b8bd 149 PANTHER PTHR10681 2 146 1.0E-47 T 22-04-2016 AMK43_RS05155 55f38db41292ca8fc63db47c3566b8bd 149 Gene3D G3DSA:3.40.30.10 2 147 1.2E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS05155 55f38db41292ca8fc63db47c3566b8bd 149 Pfam PF00578 AhpC/TSA family 2 126 9.1E-39 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMK43_RS05595 6b688015291b52fed14b8b2eeb30cae6 69 SUPERFAMILY SSF140683 1 65 1.15E-16 T 22-04-2016 AMK43_RS05595 6b688015291b52fed14b8b2eeb30cae6 69 TIGRFAM TIGR03980 prismane_assoc: hybrid cluster protein-associated redox disulfide domain 4 61 1.6E-22 T 22-04-2016 IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide AMK43_RS05595 6b688015291b52fed14b8b2eeb30cae6 69 Pfam PF08984 Domain of unknown function (DUF1858) 5 57 2.5E-15 T 22-04-2016 IPR015077 Domain of unknown function DUF1858 AMK43_RS05595 6b688015291b52fed14b8b2eeb30cae6 69 PANTHER PTHR39341 3 69 4.7E-21 T 22-04-2016 AMK43_RS02705 a6eef37a26140150d274effdca1c86a5 332 Pfam PF02780 Transketolase, C-terminal domain 198 321 1.9E-38 T 22-04-2016 IPR033248 Transketolase, C-terminal domain AMK43_RS02705 a6eef37a26140150d274effdca1c86a5 332 PANTHER PTHR11624 1 332 1.5E-179 T 22-04-2016 IPR033247 Transketolase family AMK43_RS02705 a6eef37a26140150d274effdca1c86a5 332 Gene3D G3DSA:3.40.50.920 199 329 1.6E-44 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK43_RS02705 a6eef37a26140150d274effdca1c86a5 332 SUPERFAMILY SSF52518 7 196 1.12E-63 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS02705 a6eef37a26140150d274effdca1c86a5 332 SUPERFAMILY SSF52922 195 330 1.96E-40 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK43_RS02705 a6eef37a26140150d274effdca1c86a5 332 PANTHER PTHR11624:SF78 1 332 1.5E-179 T 22-04-2016 AMK43_RS02705 a6eef37a26140150d274effdca1c86a5 332 SMART SM00861 8 183 3.8E-59 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK43_RS02705 a6eef37a26140150d274effdca1c86a5 332 Gene3D G3DSA:3.40.50.970 5 198 4.0E-80 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS02705 a6eef37a26140150d274effdca1c86a5 332 Pfam PF02779 Transketolase, pyrimidine binding domain 8 183 6.5E-45 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK43_RS08230 e239a24e8cef23b0b34f4f744fee34e6 315 PANTHER PTHR18964:SF123 1 312 9.9E-90 T 22-04-2016 AMK43_RS08230 e239a24e8cef23b0b34f4f744fee34e6 315 Gene3D G3DSA:3.30.420.40 1 142 3.4E-39 T 22-04-2016 AMK43_RS08230 e239a24e8cef23b0b34f4f744fee34e6 315 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 5 312 5.6E-83 T 22-04-2016 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 AMK43_RS08230 e239a24e8cef23b0b34f4f744fee34e6 315 ProSitePatterns PS01125 ROK family signature. 138 165 - T 22-04-2016 IPR000600 ROK family AMK43_RS08230 e239a24e8cef23b0b34f4f744fee34e6 315 SUPERFAMILY SSF53067 1 313 2.53E-70 T 22-04-2016 AMK43_RS08230 e239a24e8cef23b0b34f4f744fee34e6 315 Pfam PF00480 ROK family 4 312 1.1E-73 T 22-04-2016 IPR000600 ROK family AMK43_RS08230 e239a24e8cef23b0b34f4f744fee34e6 315 Gene3D G3DSA:3.30.420.40 143 300 1.8E-55 T 22-04-2016 AMK43_RS08230 e239a24e8cef23b0b34f4f744fee34e6 315 PANTHER PTHR18964 1 312 9.9E-90 T 22-04-2016 AMK43_RS02995 52046ac3e27b3d4df5786a410197bed9 155 PANTHER PTHR30505 3 155 1.2E-35 T 22-04-2016 AMK43_RS02995 52046ac3e27b3d4df5786a410197bed9 155 SUPERFAMILY SSF55804 3 152 1.03E-38 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 AMK43_RS02995 52046ac3e27b3d4df5786a410197bed9 155 PANTHER PTHR30505:SF5 3 155 1.2E-35 T 22-04-2016 AMK43_RS02995 52046ac3e27b3d4df5786a410197bed9 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 150 1.6E-35 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS02995 52046ac3e27b3d4df5786a410197bed9 155 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 8 136 4.6E-33 T 22-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS02995 52046ac3e27b3d4df5786a410197bed9 155 Gene3D G3DSA:3.40.930.10 3 151 1.3E-44 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS09275 947d5363e2a0104acff67ce1ed62e191 316 SUPERFAMILY SSF52317 15 170 1.01E-44 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS09275 947d5363e2a0104acff67ce1ed62e191 316 Pfam PF02016 LD-carboxypeptidase 27 302 2.8E-79 T 22-04-2016 IPR003507 Peptidase family S66 AMK43_RS09275 947d5363e2a0104acff67ce1ed62e191 316 SUPERFAMILY SSF141986 154 307 5.75E-41 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain AMK43_RS09275 947d5363e2a0104acff67ce1ed62e191 316 Gene3D G3DSA:3.50.30.60 178 309 8.2E-44 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain AMK43_RS09275 947d5363e2a0104acff67ce1ed62e191 316 PIRSF PIRSF028757 15 316 1.9E-90 T 22-04-2016 IPR003507 Peptidase family S66 AMK43_RS09275 947d5363e2a0104acff67ce1ed62e191 316 PANTHER PTHR30237:SF2 15 315 4.1E-92 T 22-04-2016 AMK43_RS09275 947d5363e2a0104acff67ce1ed62e191 316 PANTHER PTHR30237 15 315 4.1E-92 T 22-04-2016 AMK43_RS09275 947d5363e2a0104acff67ce1ed62e191 316 Gene3D G3DSA:3.40.50.10740 14 168 1.0E-48 T 22-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain AMK43_RS05220 d00471b88cb7a4b09edf45a9e70cb728 102 Hamap MF_00312 V-type ATP synthase subunit F [atpF]. 2 102 17.32 T 22-04-2016 IPR022944 ATPase, V1 complex, subunit F, bacterial/archaeal AMK43_RS05220 d00471b88cb7a4b09edf45a9e70cb728 102 Pfam PF01990 ATP synthase (F/14-kDa) subunit 4 93 4.4E-22 T 22-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 AMK43_RS05220 d00471b88cb7a4b09edf45a9e70cb728 102 Gene3D G3DSA:3.40.50.10580 3 101 6.9E-22 T 22-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 AMK43_RS05220 d00471b88cb7a4b09edf45a9e70cb728 102 SUPERFAMILY SSF159468 4 101 2.62E-26 T 22-04-2016 IPR008218 ATPase, V1 complex, subunit F GO:0034220 AMK43_RS04755 d83acabe42bd6fb6ac9ad0904482ade3 162 SMART SM00852 5 149 2.1E-19 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS04755 d83acabe42bd6fb6ac9ad0904482ade3 162 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 143 6.1E-33 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS04755 d83acabe42bd6fb6ac9ad0904482ade3 162 SUPERFAMILY SSF53218 2 153 1.31E-40 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS04755 d83acabe42bd6fb6ac9ad0904482ade3 162 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 65 78 - T 22-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 AMK43_RS04755 d83acabe42bd6fb6ac9ad0904482ade3 162 Pfam PF00994 Probable molybdopterin binding domain 5 144 1.1E-31 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS04755 d83acabe42bd6fb6ac9ad0904482ade3 162 Gene3D G3DSA:3.40.980.10 2 155 1.0E-47 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS04755 d83acabe42bd6fb6ac9ad0904482ade3 162 PANTHER PTHR10192 2 160 3.2E-59 T 22-04-2016 AMK43_RS03720 8da7909d24aa1b74f2223f10ce524388 188 PANTHER PTHR10681 1 188 7.2E-83 T 22-04-2016 AMK43_RS03720 8da7909d24aa1b74f2223f10ce524388 188 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 188 3.1E-92 T 22-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 AMK43_RS03720 8da7909d24aa1b74f2223f10ce524388 188 Pfam PF00578 AhpC/TSA family 4 134 1.2E-33 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMK43_RS03720 8da7909d24aa1b74f2223f10ce524388 188 PIRSF PIRSF000239 1 188 9.2E-54 T 22-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 AMK43_RS03720 8da7909d24aa1b74f2223f10ce524388 188 Gene3D G3DSA:3.40.30.10 3 184 1.7E-58 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS03720 8da7909d24aa1b74f2223f10ce524388 188 PANTHER PTHR10681:SF121 1 188 7.2E-83 T 22-04-2016 AMK43_RS03720 8da7909d24aa1b74f2223f10ce524388 188 SUPERFAMILY SSF52833 1 187 1.64E-52 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS09045 ca55fbf1aa1037108b31f705e3ed4dd4 304 SMART SM01130 7 297 5.9E-80 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS09045 ca55fbf1aa1037108b31f705e3ed4dd4 304 SUPERFAMILY SSF51569 7 292 1.67E-77 T 22-04-2016 AMK43_RS09045 ca55fbf1aa1037108b31f705e3ed4dd4 304 PIRSF PIRSF001365 3 302 5.5E-71 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS09045 ca55fbf1aa1037108b31f705e3ed4dd4 304 PANTHER PTHR12128:SF30 7 297 2.0E-102 T 22-04-2016 AMK43_RS09045 ca55fbf1aa1037108b31f705e3ed4dd4 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 77 95 6.14E-17 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS09045 ca55fbf1aa1037108b31f705e3ed4dd4 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 109 125 6.14E-17 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS09045 ca55fbf1aa1037108b31f705e3ed4dd4 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 134 151 6.14E-17 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS09045 ca55fbf1aa1037108b31f705e3ed4dd4 304 PRINTS PR00146 Dihydrodipicolinate synthase signature 41 62 6.14E-17 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS09045 ca55fbf1aa1037108b31f705e3ed4dd4 304 PANTHER PTHR12128 7 297 2.0E-102 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS09045 ca55fbf1aa1037108b31f705e3ed4dd4 304 Pfam PF00701 Dihydrodipicolinate synthetase family 7 292 1.8E-67 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS09045 ca55fbf1aa1037108b31f705e3ed4dd4 304 Gene3D G3DSA:3.20.20.70 5 290 2.7E-85 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS04155 bc6779b73ac0adc76fc82a9f8e87e79c 435 SUPERFAMILY SSF55035 118 223 9.15E-30 T 22-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 AMK43_RS04155 bc6779b73ac0adc76fc82a9f8e87e79c 435 PANTHER PTHR10572 13 435 2.9E-136 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 AMK43_RS04155 bc6779b73ac0adc76fc82a9f8e87e79c 435 Gene3D G3DSA:3.30.70.420 123 223 1.2E-37 T 22-04-2016 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 AMK43_RS04155 bc6779b73ac0adc76fc82a9f8e87e79c 435 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 15 391 3.1E-99 T 22-04-2016 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 AMK43_RS04155 bc6779b73ac0adc76fc82a9f8e87e79c 435 SUPERFAMILY SSF56542 12 125 2.49E-98 T 22-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 AMK43_RS04155 bc6779b73ac0adc76fc82a9f8e87e79c 435 SUPERFAMILY SSF56542 234 433 2.49E-98 T 22-04-2016 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 AMK43_RS04155 bc6779b73ac0adc76fc82a9f8e87e79c 435 Gene3D G3DSA:3.90.770.10 239 380 1.0E-84 T 22-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 AMK43_RS04155 bc6779b73ac0adc76fc82a9f8e87e79c 435 Gene3D G3DSA:3.90.770.10 13 122 1.0E-84 T 22-04-2016 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 AMK43_RS04155 bc6779b73ac0adc76fc82a9f8e87e79c 435 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 23 392 7.2E-104 T 22-04-2016 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 AMK43_RS04155 bc6779b73ac0adc76fc82a9f8e87e79c 435 ProSitePatterns PS01192 Hydroxymethylglutaryl-coenzyme A reductases signature 3. 377 390 - T 22-04-2016 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|UniPathway: UPA00058 AMK43_RS04155 bc6779b73ac0adc76fc82a9f8e87e79c 435 PANTHER PTHR10572:SF6 13 435 2.9E-136 T 22-04-2016 AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 SUPERFAMILY SSF46689 253 304 4.21E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 Pfam PF12833 Helix-turn-helix domain 340 416 6.2E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 Pfam PF12833 Helix-turn-helix domain 227 301 9.4E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 Gene3D G3DSA:1.10.10.60 313 368 6.4E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 Gene3D G3DSA:1.10.10.60 205 253 4.8E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 SUPERFAMILY SSF51215 34 76 9.29E-5 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 SMART SM00342 332 415 3.5E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 SMART SM00342 217 300 2.7E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 Gene3D G3DSA:2.60.120.10 31 97 3.7E-4 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 SUPERFAMILY SSF46689 368 418 8.51E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 369 411 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 PANTHER PTHR11019:SF65 311 422 9.7E-23 T 22-04-2016 AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 PANTHER PTHR11019 311 422 9.7E-23 T 22-04-2016 AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 Gene3D G3DSA:1.10.10.60 254 304 3.0E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS05955 8199827dc5a73a21c5b18e0b2d7478cb 422 Gene3D G3DSA:1.10.10.60 369 417 1.1E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS02905 db89368b0e60d50972f48490225d467f 279 SUPERFAMILY SSF102522 1 159 8.89E-55 T 22-04-2016 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal AMK43_RS02905 db89368b0e60d50972f48490225d467f 279 SUPERFAMILY SSF101852 171 273 1.57E-26 T 22-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal AMK43_RS02905 db89368b0e60d50972f48490225d467f 279 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 2 269 6.9E-73 T 22-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase AMK43_RS02905 db89368b0e60d50972f48490225d467f 279 Gene3D G3DSA:2.40.30.90 171 273 1.4E-25 T 22-04-2016 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal AMK43_RS02905 db89368b0e60d50972f48490225d467f 279 PIRSF PIRSF006779 1 275 4.3E-95 T 22-04-2016 IPR002747 SAM-dependent chlorinase/fluorinase AMK43_RS02905 db89368b0e60d50972f48490225d467f 279 PANTHER PTHR35092 1 279 4.2E-140 T 22-04-2016 AMK43_RS02905 db89368b0e60d50972f48490225d467f 279 PANTHER PTHR35092:SF2 1 279 4.2E-140 T 22-04-2016 AMK43_RS10835 9ef32ac1db16c62ccc9c0e311dbe6335 148 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 3 126 9.0E-37 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 AMK43_RS10835 9ef32ac1db16c62ccc9c0e311dbe6335 148 SUPERFAMILY SSF74982 2 126 1.1E-48 T 22-04-2016 IPR023620 Small protein B AMK43_RS10835 9ef32ac1db16c62ccc9c0e311dbe6335 148 PANTHER PTHR30308 2 148 7.3E-70 T 22-04-2016 AMK43_RS10835 9ef32ac1db16c62ccc9c0e311dbe6335 148 ProSitePatterns PS01317 SsrA-binding protein. 21 33 - T 22-04-2016 IPR020081 SsrA-binding protein, conserved site AMK43_RS10835 9ef32ac1db16c62ccc9c0e311dbe6335 148 TIGRFAM TIGR00086 smpB: SsrA-binding protein 3 142 1.1E-57 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 AMK43_RS10835 9ef32ac1db16c62ccc9c0e311dbe6335 148 Pfam PF01668 SmpB protein 3 66 1.5E-29 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 AMK43_RS10835 9ef32ac1db16c62ccc9c0e311dbe6335 148 Hamap MF_00023 SsrA-binding protein [smpB]. 1 148 65.366 T 22-04-2016 IPR000037 SsrA-binding protein GO:0003723 AMK43_RS10835 9ef32ac1db16c62ccc9c0e311dbe6335 148 PANTHER PTHR30308:SF2 2 148 7.3E-70 T 22-04-2016 AMK43_RS10835 9ef32ac1db16c62ccc9c0e311dbe6335 148 Gene3D G3DSA:2.40.280.10 2 121 2.8E-49 T 22-04-2016 IPR023620 Small protein B AMK43_RS04010 050bb0b58cc136df5ba2664f309e77a3 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 5.2E-26 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS04010 050bb0b58cc136df5ba2664f309e77a3 88 PANTHER PTHR33398 1 87 3.4E-32 T 22-04-2016 AMK43_RS04010 050bb0b58cc136df5ba2664f309e77a3 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.208 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS04010 050bb0b58cc136df5ba2664f309e77a3 88 Pfam PF01649 Ribosomal protein S20 2 84 2.7E-27 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS04010 050bb0b58cc136df5ba2664f309e77a3 88 Gene3D G3DSA:1.20.58.110 1 86 4.6E-30 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS04010 050bb0b58cc136df5ba2664f309e77a3 88 SUPERFAMILY SSF46992 4 86 1.05E-28 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS04010 050bb0b58cc136df5ba2664f309e77a3 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 15 86 1.0E-20 T 22-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS04560 f8f2370c74ef0339e0752c9ea6d917b6 119 Gene3D G3DSA:3.40.1350.10 12 119 1.4E-28 T 22-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 AMK43_RS04560 f8f2370c74ef0339e0752c9ea6d917b6 119 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 115 21.104 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 AMK43_RS04560 f8f2370c74ef0339e0752c9ea6d917b6 119 SUPERFAMILY SSF52980 10 106 2.15E-17 T 22-04-2016 IPR011335 Restriction endonuclease type II-like AMK43_RS04560 f8f2370c74ef0339e0752c9ea6d917b6 119 PANTHER PTHR34039 1 119 2.2E-29 T 22-04-2016 AMK43_RS04560 f8f2370c74ef0339e0752c9ea6d917b6 119 PANTHER PTHR34039:SF1 1 119 2.2E-29 T 22-04-2016 AMK43_RS04560 f8f2370c74ef0339e0752c9ea6d917b6 119 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 3 119 3.1E-24 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 AMK43_RS04560 f8f2370c74ef0339e0752c9ea6d917b6 119 Pfam PF02021 Uncharacterised protein family UPF0102 12 102 7.7E-24 T 22-04-2016 IPR003509 Uncharacterised protein family UPF0102 AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 Gene3D G3DSA:3.40.50.1170 2 224 2.9E-69 T 22-04-2016 IPR027474 L-asparaginase, N-terminal AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 85 95 - T 22-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 5 353 4.5E-87 T 22-04-2016 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 SMART SM00870 5 341 2.0E-94 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 Pfam PF00710 Asparaginase, N-terminal 5 206 1.0E-56 T 22-04-2016 IPR027474 L-asparaginase, N-terminal AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 22-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 SUPERFAMILY SSF53774 2 353 1.83E-92 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 PANTHER PTHR11707 3 353 1.4E-117 T 22-04-2016 AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 PRINTS PR00139 Asparaginase/glutaminase family signature 278 296 3.9E-15 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 PRINTS PR00139 Asparaginase/glutaminase family signature 84 102 3.9E-15 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 3.9E-15 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 PIRSF PIRSF001220 1 352 5.4E-84 T 22-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 PANTHER PTHR11707:SF28 3 353 1.4E-117 T 22-04-2016 AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 PIRSF PIRSF500176 2 350 1.3E-92 T 22-04-2016 AMK43_RS02310 6163b8f02e945a767b9fe08166aa5a5a 355 Gene3D G3DSA:3.40.50.40 225 353 9.8E-41 T 22-04-2016 IPR027473 L-asparaginase, C-terminal domain AMK43_RS04365 c796feb248fbd8212e7762a5a3a6475f 193 PANTHER PTHR33602 46 178 1.3E-19 T 22-04-2016 AMK43_RS04365 c796feb248fbd8212e7762a5a3a6475f 193 Pfam PF02631 RecX family 72 177 4.5E-18 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 AMK43_RS04365 c796feb248fbd8212e7762a5a3a6475f 193 PANTHER PTHR33602:SF1 46 178 1.3E-19 T 22-04-2016 AMK43_RS04365 c796feb248fbd8212e7762a5a3a6475f 193 Gene3D G3DSA:1.10.10.10 56 94 6.2E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS04365 c796feb248fbd8212e7762a5a3a6475f 193 Hamap MF_01114 Regulatory protein RecX [recX]. 30 188 13.397 T 22-04-2016 IPR003783 Regulatory protein RecX GO:0006282 AMK43_RS04365 c796feb248fbd8212e7762a5a3a6475f 193 Gene3D G3DSA:1.10.10.10 95 131 2.3E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS10620 1c997a5c6c8838a7c5489ef9eb0d188d 303 Gene3D G3DSA:3.40.50.1100 37 134 5.6E-40 T 22-04-2016 AMK43_RS10620 1c997a5c6c8838a7c5489ef9eb0d188d 303 PANTHER PTHR10314:SF110 2 303 4.2E-129 T 22-04-2016 AMK43_RS10620 1c997a5c6c8838a7c5489ef9eb0d188d 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 290 3.1E-66 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK43_RS10620 1c997a5c6c8838a7c5489ef9eb0d188d 303 Gene3D G3DSA:3.40.50.1100 135 299 2.4E-67 T 22-04-2016 AMK43_RS10620 1c997a5c6c8838a7c5489ef9eb0d188d 303 SUPERFAMILY SSF53686 1 299 5.89E-98 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK43_RS10620 1c997a5c6c8838a7c5489ef9eb0d188d 303 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 301 8.3E-121 T 22-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 AMK43_RS10620 1c997a5c6c8838a7c5489ef9eb0d188d 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 302 1.2E-119 T 22-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 AMK43_RS10620 1c997a5c6c8838a7c5489ef9eb0d188d 303 PANTHER PTHR10314 2 303 4.2E-129 T 22-04-2016 AMK43_RS00640 da99382911847910f5e08a493967df39 461 PANTHER PTHR11206 2 459 9.6E-118 T 22-04-2016 AMK43_RS00640 da99382911847910f5e08a493967df39 461 Pfam PF01554 MatE 29 189 3.5E-25 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS00640 da99382911847910f5e08a493967df39 461 Pfam PF01554 MatE 254 415 3.6E-18 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS00640 da99382911847910f5e08a493967df39 461 PANTHER PTHR11206:SF132 2 459 9.6E-118 T 22-04-2016 AMK43_RS00640 da99382911847910f5e08a493967df39 461 PIRSF PIRSF006603 3 461 4.0E-103 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS00640 da99382911847910f5e08a493967df39 461 TIGRFAM TIGR00797 matE: MATE efflux family protein 29 426 2.4E-61 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS04450 24d6f20a6414f604d35e9fce1678f686 380 Pfam PF02653 Branched-chain amino acid transport system / permease component 14 320 1.6E-26 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK43_RS04450 24d6f20a6414f604d35e9fce1678f686 380 PANTHER PTHR32196 1 144 1.2E-82 T 22-04-2016 AMK43_RS04450 24d6f20a6414f604d35e9fce1678f686 380 PANTHER PTHR32196 190 311 1.2E-82 T 22-04-2016 AMK43_RS04450 24d6f20a6414f604d35e9fce1678f686 380 PANTHER PTHR32196 332 379 1.2E-82 T 22-04-2016 AMK43_RS04450 24d6f20a6414f604d35e9fce1678f686 380 PANTHER PTHR32196:SF27 1 144 1.2E-82 T 22-04-2016 AMK43_RS04450 24d6f20a6414f604d35e9fce1678f686 380 PANTHER PTHR32196:SF27 190 311 1.2E-82 T 22-04-2016 AMK43_RS04450 24d6f20a6414f604d35e9fce1678f686 380 PANTHER PTHR32196:SF27 332 379 1.2E-82 T 22-04-2016 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 380 448 2.1E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 SUPERFAMILY SSF53738 163 261 5.89E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 SUPERFAMILY SSF55957 362 453 7.46E-20 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 164 258 5.5E-19 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 Gene3D G3DSA:3.40.120.10 255 372 3.2E-34 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 PANTHER PTHR22573 3 453 8.7E-157 T 22-04-2016 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 140 4.5E-42 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 451 44.158 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 PANTHER PTHR22573:SF15 3 453 8.7E-157 T 22-04-2016 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 370 3.1E-31 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 Gene3D G3DSA:3.30.310.50 379 452 1.2E-16 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 SUPERFAMILY SSF53738 2 185 1.37E-46 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 SUPERFAMILY SSF53738 262 370 5.49E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 178 197 1.8E-15 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 1.8E-15 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 1.8E-15 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 Gene3D G3DSA:3.40.120.10 3 141 3.2E-45 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 Gene3D G3DSA:3.40.120.10 180 254 5.6E-26 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03890 691cff2fe78aca135f02e70325f1e211 453 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 449 4.9E-175 T 22-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS10580 6bbf82dcc3bd4f5a1ecb1da398d4858b 527 SUPERFAMILY SSF53850 16 520 4.16E-127 T 22-04-2016 AMK43_RS10580 6bbf82dcc3bd4f5a1ecb1da398d4858b 527 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 448 1.2E-84 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK43_RS10580 6bbf82dcc3bd4f5a1ecb1da398d4858b 527 PANTHER PTHR30290:SF10 4 519 9.1E-154 T 22-04-2016 AMK43_RS10580 6bbf82dcc3bd4f5a1ecb1da398d4858b 527 Gene3D G3DSA:3.10.105.10 291 496 1.7E-52 T 22-04-2016 AMK43_RS10580 6bbf82dcc3bd4f5a1ecb1da398d4858b 527 PIRSF PIRSF002741 17 527 6.4E-114 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK43_RS10580 6bbf82dcc3bd4f5a1ecb1da398d4858b 527 Gene3D G3DSA:3.40.190.10 142 290 5.9E-49 T 22-04-2016 AMK43_RS10580 6bbf82dcc3bd4f5a1ecb1da398d4858b 527 PANTHER PTHR30290 4 519 9.1E-154 T 22-04-2016 AMK43_RS03195 9bcbdfe92ebeb2452477d4eed240c7b8 426 PANTHER PTHR30213 1 425 3.0E-67 T 22-04-2016 AMK43_RS03195 9bcbdfe92ebeb2452477d4eed240c7b8 426 Pfam PF03631 Virulence factor BrkB 44 286 1.6E-45 T 22-04-2016 IPR017039 Virulence factor BrkB AMK43_RS03195 9bcbdfe92ebeb2452477d4eed240c7b8 426 PANTHER PTHR30213:SF0 1 425 3.0E-67 T 22-04-2016 AMK43_RS03195 9bcbdfe92ebeb2452477d4eed240c7b8 426 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 32 285 2.2E-38 T 22-04-2016 IPR017039 Virulence factor BrkB AMK43_RS07680 12bcac3cd3f4bab822cc0d841cbec1cb 283 SUPERFAMILY SSF54506 2 132 4.4E-32 T 22-04-2016 AMK43_RS07680 12bcac3cd3f4bab822cc0d841cbec1cb 283 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 65 79 - T 22-04-2016 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07680 12bcac3cd3f4bab822cc0d841cbec1cb 283 Pfam PF01678 Diaminopimelate epimerase 159 272 2.5E-22 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07680 12bcac3cd3f4bab822cc0d841cbec1cb 283 Pfam PF01678 Diaminopimelate epimerase 4 129 7.7E-30 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07680 12bcac3cd3f4bab822cc0d841cbec1cb 283 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 2 281 34.907 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07680 12bcac3cd3f4bab822cc0d841cbec1cb 283 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 3 280 1.2E-78 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07680 12bcac3cd3f4bab822cc0d841cbec1cb 283 SUPERFAMILY SSF54506 144 278 1.88E-39 T 22-04-2016 AMK43_RS07680 12bcac3cd3f4bab822cc0d841cbec1cb 283 Gene3D G3DSA:3.10.310.10 2 126 7.2E-39 T 22-04-2016 AMK43_RS07680 12bcac3cd3f4bab822cc0d841cbec1cb 283 Gene3D G3DSA:3.10.310.10 127 269 5.4E-42 T 22-04-2016 AMK43_RS07680 12bcac3cd3f4bab822cc0d841cbec1cb 283 PANTHER PTHR31689 1 283 3.3E-91 T 22-04-2016 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS03230 1ec1ccf863cc53d139fa3304aa45a36f 141 Gene3D G3DSA:1.10.10.250 72 139 2.7E-29 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK43_RS03230 1ec1ccf863cc53d139fa3304aa45a36f 141 Gene3D G3DSA:3.30.1550.10 2 71 4.0E-37 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal AMK43_RS03230 1ec1ccf863cc53d139fa3304aa45a36f 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 22-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 AMK43_RS03230 1ec1ccf863cc53d139fa3304aa45a36f 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 2.5E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal AMK43_RS03230 1ec1ccf863cc53d139fa3304aa45a36f 141 SUPERFAMILY SSF46906 67 139 1.11E-24 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK43_RS03230 1ec1ccf863cc53d139fa3304aa45a36f 141 PANTHER PTHR11661 1 139 9.9E-66 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMK43_RS03230 1ec1ccf863cc53d139fa3304aa45a36f 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 37 73 2.0E-14 T 22-04-2016 AMK43_RS03230 1ec1ccf863cc53d139fa3304aa45a36f 141 PANTHER PTHR11661:SF7 1 139 9.9E-66 T 22-04-2016 AMK43_RS03230 1ec1ccf863cc53d139fa3304aa45a36f 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 2.0E-60 T 22-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMK43_RS03230 1ec1ccf863cc53d139fa3304aa45a36f 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 30.353 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMK43_RS03230 1ec1ccf863cc53d139fa3304aa45a36f 141 SUPERFAMILY SSF54747 3 72 2.75E-29 T 22-04-2016 IPR020784 Ribosomal protein L11, N-terminal AMK43_RS03230 1ec1ccf863cc53d139fa3304aa45a36f 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 3.6E-23 T 22-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK43_RS03230 1ec1ccf863cc53d139fa3304aa45a36f 141 SMART SM00649 9 140 6.9E-81 T 22-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 AMK43_RS08695 45efb1dae911db7e17f4c645d1ac83a1 266 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 220 242 - T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK43_RS08695 45efb1dae911db7e17f4c645d1ac83a1 266 Gene3D G3DSA:3.40.50.720 1 158 6.1E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS08695 45efb1dae911db7e17f4c645d1ac83a1 266 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 160 264 2.4E-39 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK43_RS08695 45efb1dae911db7e17f4c645d1ac83a1 266 PIRSF PIRSF000193 1 266 4.5E-87 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK43_RS08695 45efb1dae911db7e17f4c645d1ac83a1 266 SUPERFAMILY SSF48179 159 265 1.0E-36 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK43_RS08695 45efb1dae911db7e17f4c645d1ac83a1 266 PANTHER PTHR11645 1 266 6.7E-113 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK43_RS08695 45efb1dae911db7e17f4c645d1ac83a1 266 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 97 1.7E-18 T 22-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal AMK43_RS08695 45efb1dae911db7e17f4c645d1ac83a1 266 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 264 7.9E-88 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK43_RS08695 45efb1dae911db7e17f4c645d1ac83a1 266 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 264 27.143 T 22-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK43_RS08695 45efb1dae911db7e17f4c645d1ac83a1 266 SUPERFAMILY SSF51735 1 158 6.17E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS08695 45efb1dae911db7e17f4c645d1ac83a1 266 Gene3D G3DSA:1.10.3730.10 159 264 1.4E-42 T 22-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 AMK43_RS11060 cc416c5c768902b7d51439cbf32defe0 242 Gene3D G3DSA:3.40.50.1220 2 32 2.4E-46 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK43_RS11060 cc416c5c768902b7d51439cbf32defe0 242 Gene3D G3DSA:3.40.50.1220 175 241 2.4E-46 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK43_RS11060 cc416c5c768902b7d51439cbf32defe0 242 Gene3D G3DSA:3.40.50.1220 86 123 2.4E-46 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK43_RS11060 cc416c5c768902b7d51439cbf32defe0 242 PANTHER PTHR11085 4 241 1.3E-82 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 AMK43_RS11060 cc416c5c768902b7d51439cbf32defe0 242 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 6 242 59.161 T 22-04-2016 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 AMK43_RS11060 cc416c5c768902b7d51439cbf32defe0 242 SUPERFAMILY SSF52467 2 241 1.99E-81 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK43_RS11060 cc416c5c768902b7d51439cbf32defe0 242 Gene3D G3DSA:3.30.1600.10 33 76 9.6E-25 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain AMK43_RS11060 cc416c5c768902b7d51439cbf32defe0 242 Gene3D G3DSA:3.30.1600.10 124 169 9.6E-25 T 22-04-2016 IPR026591 Sirtuin family, catalytic core small domain AMK43_RS11060 cc416c5c768902b7d51439cbf32defe0 242 Pfam PF02146 Sir2 family 22 199 8.8E-52 T 22-04-2016 IPR003000 Sirtuin family GO:0070403 AMK43_RS01025 b63fe1c080099d3ee222003242869bbe 373 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 44 82 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMK43_RS01025 b63fe1c080099d3ee222003242869bbe 373 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 140 362 4.3E-45 T 22-04-2016 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 AMK43_RS01025 b63fe1c080099d3ee222003242869bbe 373 PANTHER PTHR11079:SF10 1 213 6.3E-62 T 22-04-2016 AMK43_RS01025 b63fe1c080099d3ee222003242869bbe 373 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 93 2.8E-19 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AMK43_RS01025 b63fe1c080099d3ee222003242869bbe 373 SUPERFAMILY SSF53597 141 360 7.66E-44 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain AMK43_RS01025 b63fe1c080099d3ee222003242869bbe 373 PIRSF PIRSF006769 1 367 3.1E-118 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 AMK43_RS01025 b63fe1c080099d3ee222003242869bbe 373 SUPERFAMILY SSF53927 1 138 2.66E-45 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK43_RS01025 b63fe1c080099d3ee222003242869bbe 373 Gene3D G3DSA:3.40.140.10 1 121 2.1E-33 T 22-04-2016 AMK43_RS01025 b63fe1c080099d3ee222003242869bbe 373 Gene3D G3DSA:3.40.430.10 122 366 3.1E-58 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain AMK43_RS01025 b63fe1c080099d3ee222003242869bbe 373 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 1 357 3.9E-103 T 22-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 AMK43_RS01025 b63fe1c080099d3ee222003242869bbe 373 PANTHER PTHR11079 1 213 6.3E-62 T 22-04-2016 AMK43_RS01025 b63fe1c080099d3ee222003242869bbe 373 Pfam PF01872 RibD C-terminal domain 141 342 1.3E-34 T 22-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 AMK43_RS04640 2b61bfabb9d3a37957129a4893d02ed5 262 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 261 1.2E-62 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK43_RS04640 2b61bfabb9d3a37957129a4893d02ed5 262 SUPERFAMILY SSF53850 1 261 6.39E-64 T 22-04-2016 AMK43_RS04640 2b61bfabb9d3a37957129a4893d02ed5 262 PANTHER PTHR18966 35 260 2.3E-44 T 22-04-2016 AMK43_RS04640 2b61bfabb9d3a37957129a4893d02ed5 262 Gene3D G3DSA:3.40.190.10 123 222 7.2E-25 T 22-04-2016 AMK43_RS04640 2b61bfabb9d3a37957129a4893d02ed5 262 SMART SM00079 36 262 5.3E-4 T 22-04-2016 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 AMK43_RS04640 2b61bfabb9d3a37957129a4893d02ed5 262 PANTHER PTHR18966:SF152 35 260 2.3E-44 T 22-04-2016 AMK43_RS04640 2b61bfabb9d3a37957129a4893d02ed5 262 Gene3D G3DSA:3.40.190.10 223 261 5.3E-43 T 22-04-2016 AMK43_RS04640 2b61bfabb9d3a37957129a4893d02ed5 262 Gene3D G3DSA:3.40.190.10 35 122 5.3E-43 T 22-04-2016 AMK43_RS04640 2b61bfabb9d3a37957129a4893d02ed5 262 SMART SM00062 36 262 1.5E-63 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK43_RS04640 2b61bfabb9d3a37957129a4893d02ed5 262 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 22-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 AMK43_RS09350 c42d7f546decd39c76f6369d38ddd8f7 428 SUPERFAMILY SSF102114 119 356 5.62E-59 T 22-04-2016 AMK43_RS09350 c42d7f546decd39c76f6369d38ddd8f7 428 Gene3D G3DSA:3.80.30.20 134 365 6.1E-81 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMK43_RS09350 c42d7f546decd39c76f6369d38ddd8f7 428 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 1 426 8.8E-154 T 22-04-2016 AMK43_RS09350 c42d7f546decd39c76f6369d38ddd8f7 428 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 1 428 64.48 T 22-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 AMK43_RS09350 c42d7f546decd39c76f6369d38ddd8f7 428 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 1 424 1.4E-147 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AMK43_RS09350 c42d7f546decd39c76f6369d38ddd8f7 428 SMART SM00729 134 353 1.5E-61 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK43_RS09350 c42d7f546decd39c76f6369d38ddd8f7 428 PANTHER PTHR11918 1 426 9.2E-169 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein AMK43_RS09350 c42d7f546decd39c76f6369d38ddd8f7 428 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 138 158 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMK43_RS09350 c42d7f546decd39c76f6369d38ddd8f7 428 Pfam PF01938 TRAM domain 364 426 1.1E-11 T 22-04-2016 IPR002792 TRAM domain AMK43_RS09350 c42d7f546decd39c76f6369d38ddd8f7 428 Pfam PF00919 Uncharacterized protein family UPF0004 1 91 6.5E-22 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AMK43_RS09350 c42d7f546decd39c76f6369d38ddd8f7 428 Pfam PF04055 Radical SAM superfamily 138 310 4.2E-32 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS09350 c42d7f546decd39c76f6369d38ddd8f7 428 PANTHER PTHR11918:SF43 1 426 9.2E-169 T 22-04-2016 AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 566 577 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 460 543 1.5E-30 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 SMART SM00928 458 503 9.0E-21 T 22-04-2016 IPR019575 NADH-ubiquinone oxidoreductase 51 kDa subunit, iron-sulphur binding domain GO:0051539 AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 SUPERFAMILY SSF142019 130 369 1.03E-90 T 22-04-2016 AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 Gene3D G3DSA:3.40.30.10 23 120 1.3E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 24 100 3.4E-10 T 22-04-2016 AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 PANTHER PTHR11780 24 582 0.0 T 22-04-2016 AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 Pfam PF10531 SLBB domain 372 421 2.0E-7 T 22-04-2016 IPR019554 Soluble ligand binding domain AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 SUPERFAMILY SSF142984 370 453 3.92E-25 T 22-04-2016 AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 SUPERFAMILY SSF52833 23 114 2.46E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 Pfam PF00037 4Fe-4S binding domain 562 582 1.2E-4 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 Pfam PF00037 4Fe-4S binding domain 590 611 6.2E-5 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 PANTHER PTHR11780:SF0 24 582 0.0 T 22-04-2016 AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 471 482 - T 22-04-2016 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 Gene3D G3DSA:3.30.70.20 561 612 1.3E-11 T 22-04-2016 AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 SUPERFAMILY SSF54862 553 611 8.68E-12 T 22-04-2016 AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 SUPERFAMILY SSF140490 454 555 3.53E-37 T 22-04-2016 AMK43_RS00695 8978c7e192df4f96b6fa2d98d0d6517b 614 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 177 348 1.3E-47 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain AMK43_RS08980 a101a48020e6f0a324fa5a4d850fa201 408 Pfam PF00534 Glycosyl transferases group 1 210 328 7.3E-20 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 AMK43_RS08980 a101a48020e6f0a324fa5a4d850fa201 408 PANTHER PTHR12526 109 331 3.8E-27 T 22-04-2016 AMK43_RS08980 a101a48020e6f0a324fa5a4d850fa201 408 PANTHER PTHR12526 1 88 3.8E-27 T 22-04-2016 AMK43_RS08980 a101a48020e6f0a324fa5a4d850fa201 408 SUPERFAMILY SSF53756 5 331 3.51E-43 T 22-04-2016 AMK43_RS08980 a101a48020e6f0a324fa5a4d850fa201 408 Gene3D G3DSA:3.40.50.2000 208 326 7.3E-18 T 22-04-2016 AMK43_RS08980 a101a48020e6f0a324fa5a4d850fa201 408 Pfam PF13439 Glycosyltransferase Family 4 94 191 1.1E-6 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK43_RS03765 1058cba578055116ffb1870ac5accc0e 609 Pfam PF01380 SIS domain 293 417 5.3E-35 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK43_RS03765 1058cba578055116ffb1870ac5accc0e 609 Pfam PF01380 SIS domain 462 588 1.6E-19 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK43_RS03765 1058cba578055116ffb1870ac5accc0e 609 SUPERFAMILY SSF53697 246 609 2.97E-107 T 22-04-2016 AMK43_RS03765 1058cba578055116ffb1870ac5accc0e 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 3.8E-244 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AMK43_RS03765 1058cba578055116ffb1870ac5accc0e 609 PANTHER PTHR10937 1 609 0.0 T 22-04-2016 AMK43_RS03765 1058cba578055116ffb1870ac5accc0e 609 PANTHER PTHR10937:SF0 1 609 0.0 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AMK43_RS03765 1058cba578055116ffb1870ac5accc0e 609 Gene3D G3DSA:3.40.50.10490 244 443 1.2E-65 T 22-04-2016 AMK43_RS03765 1058cba578055116ffb1870ac5accc0e 609 Pfam PF13522 Glutamine amidotransferase domain 65 192 2.0E-21 T 22-04-2016 AMK43_RS03765 1058cba578055116ffb1870ac5accc0e 609 Gene3D G3DSA:3.40.50.10490 444 609 3.2E-58 T 22-04-2016 AMK43_RS03765 1058cba578055116ffb1870ac5accc0e 609 Gene3D G3DSA:3.60.20.10 2 240 1.5E-81 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK43_RS03765 1058cba578055116ffb1870ac5accc0e 609 SUPERFAMILY SSF56235 2 237 7.55E-74 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK43_RS03765 1058cba578055116ffb1870ac5accc0e 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 39.85 T 22-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 AMK43_RS05870 4ab1392a5cdfe7e8c928e33e2bb32621 101 Gene3D G3DSA:3.30.500.20 6 100 1.3E-24 T 22-04-2016 AMK43_RS05870 4ab1392a5cdfe7e8c928e33e2bb32621 101 Pfam PF04634 Protein of unknown function, DUF600 9 99 4.8E-21 T 22-04-2016 IPR006728 Protein of unknown function DUF600 AMK43_RS05870 4ab1392a5cdfe7e8c928e33e2bb32621 101 SUPERFAMILY SSF160424 6 99 1.31E-19 T 22-04-2016 IPR006728 Protein of unknown function DUF600 AMK43_RS05795 37991b41a8eff4cecbbab525b18564ba 511 Gene3D G3DSA:3.40.50.10260 6 232 6.5E-54 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK43_RS05795 37991b41a8eff4cecbbab525b18564ba 511 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 5 207 23.779 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK43_RS05795 37991b41a8eff4cecbbab525b18564ba 511 SUPERFAMILY SSF53613 226 504 5.52E-61 T 22-04-2016 IPR029056 Ribokinase-like AMK43_RS05795 37991b41a8eff4cecbbab525b18564ba 511 PANTHER PTHR12592:SF0 1 511 2.3E-118 T 22-04-2016 AMK43_RS05795 37991b41a8eff4cecbbab525b18564ba 511 Pfam PF01256 Carbohydrate kinase 244 501 1.9E-50 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AMK43_RS05795 37991b41a8eff4cecbbab525b18564ba 511 Gene3D G3DSA:3.40.1190.20 233 510 2.7E-73 T 22-04-2016 IPR029056 Ribokinase-like AMK43_RS05795 37991b41a8eff4cecbbab525b18564ba 511 Pfam PF03853 YjeF-related protein N-terminus 26 185 9.7E-40 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK43_RS05795 37991b41a8eff4cecbbab525b18564ba 511 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 10 206 7.2E-43 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK43_RS05795 37991b41a8eff4cecbbab525b18564ba 511 PIRSF PIRSF017184 1 511 1.7E-120 T 22-04-2016 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 AMK43_RS05795 37991b41a8eff4cecbbab525b18564ba 511 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 221 508 22.196 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AMK43_RS05795 37991b41a8eff4cecbbab525b18564ba 511 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 229 504 9.0E-56 T 22-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 AMK43_RS05795 37991b41a8eff4cecbbab525b18564ba 511 SUPERFAMILY SSF64153 5 243 1.24E-54 T 22-04-2016 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 AMK43_RS05795 37991b41a8eff4cecbbab525b18564ba 511 PANTHER PTHR12592 1 511 2.3E-118 T 22-04-2016 AMK43_RS06705 d85d7784ec069346a75266d9035ff170 302 PANTHER PTHR21445 1 293 1.1E-95 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AMK43_RS06705 d85d7784ec069346a75266d9035ff170 302 SUPERFAMILY SSF51658 3 300 1.44E-95 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK43_RS06705 d85d7784ec069346a75266d9035ff170 302 SMART SM00518 3 290 2.5E-117 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AMK43_RS06705 d85d7784ec069346a75266d9035ff170 302 Pfam PF01261 Xylose isomerase-like TIM barrel 21 239 2.9E-36 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK43_RS06705 d85d7784ec069346a75266d9035ff170 302 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 177 184 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AMK43_RS06705 d85d7784ec069346a75266d9035ff170 302 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 290 42.065 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AMK43_RS06705 d85d7784ec069346a75266d9035ff170 302 Gene3D G3DSA:3.20.20.150 2 288 1.2E-101 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK43_RS06705 d85d7784ec069346a75266d9035ff170 302 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 71 79 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AMK43_RS06705 d85d7784ec069346a75266d9035ff170 302 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 22-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 AMK43_RS06705 d85d7784ec069346a75266d9035ff170 302 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 287 3.1E-97 T 22-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 AMK43_RS01710 77af4bb0d99cb6f1ed3402444e70fc09 241 Pfam PF05857 TraX protein 15 236 6.3E-56 T 22-04-2016 IPR008875 TraX AMK43_RS03005 dd1c21b13562df4ceaec55548c1bab6f 179 SUPERFAMILY SSF52218 1 179 6.56E-43 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS03005 dd1c21b13562df4ceaec55548c1bab6f 179 PANTHER PTHR10204:SF42 1 178 2.2E-55 T 22-04-2016 AMK43_RS03005 dd1c21b13562df4ceaec55548c1bab6f 179 Gene3D G3DSA:3.40.50.360 1 178 3.6E-44 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS03005 dd1c21b13562df4ceaec55548c1bab6f 179 PANTHER PTHR10204 1 178 2.2E-55 T 22-04-2016 AMK43_RS03005 dd1c21b13562df4ceaec55548c1bab6f 179 Pfam PF02525 Flavodoxin-like fold 2 174 3.2E-42 T 22-04-2016 IPR003680 Flavodoxin-like fold AMK43_RS05035 05ccf16f901d629484169e41de194742 339 SUPERFAMILY SSF56349 32 331 3.24E-54 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK43_RS05035 05ccf16f901d629484169e41de194742 339 Gene3D G3DSA:1.10.443.10 153 330 1.8E-50 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK43_RS05035 05ccf16f901d629484169e41de194742 339 PANTHER PTHR30349 28 86 5.8E-87 T 22-04-2016 AMK43_RS05035 05ccf16f901d629484169e41de194742 339 PANTHER PTHR30349 107 339 5.8E-87 T 22-04-2016 AMK43_RS05035 05ccf16f901d629484169e41de194742 339 Pfam PF00589 Phage integrase family 154 323 1.5E-44 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK43_RS05035 05ccf16f901d629484169e41de194742 339 PANTHER PTHR30349:SF5 28 86 5.8E-87 T 22-04-2016 AMK43_RS05035 05ccf16f901d629484169e41de194742 339 PANTHER PTHR30349:SF5 107 339 5.8E-87 T 22-04-2016 AMK43_RS05035 05ccf16f901d629484169e41de194742 339 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 23 337 29.784 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD AMK43_RS05035 05ccf16f901d629484169e41de194742 339 Gene3D G3DSA:1.10.150.130 27 136 3.3E-20 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal AMK43_RS05035 05ccf16f901d629484169e41de194742 339 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 41 129 8.4E-12 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMK43_RS05890 c4f0fc3d80c54a698d8806a9dc632bb2 224 PANTHER PTHR10794:SF37 123 221 1.6E-21 T 22-04-2016 AMK43_RS05890 c4f0fc3d80c54a698d8806a9dc632bb2 224 PANTHER PTHR10794 123 221 1.6E-21 T 22-04-2016 AMK43_RS05890 c4f0fc3d80c54a698d8806a9dc632bb2 224 Pfam PF02517 CAAX protease self-immunity 122 208 2.3E-20 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 Gene3D G3DSA:2.40.30.10 304 403 1.2E-36 T 22-04-2016 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 SUPERFAMILY SSF54980 601 688 1.01E-29 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 SUPERFAMILY SSF54980 401 479 1.37E-23 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 Pfam PF03764 Elongation factor G, domain IV 478 596 4.3E-47 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 Pfam PF03144 Elongation factor Tu domain 2 323 390 2.7E-15 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 Pfam PF00009 Elongation factor Tu GTP binding domain 9 281 2.5E-68 T 22-04-2016 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 Gene3D G3DSA:3.30.70.240 597 683 1.1E-33 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 SUPERFAMILY SSF54211 481 597 2.53E-43 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 Pfam PF14492 Elongation Factor G, domain II 403 477 1.5E-34 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 Gene3D G3DSA:3.30.70.870 404 479 1.6E-38 T 22-04-2016 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 179 1.3E-36 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 Gene3D G3DSA:3.40.50.300 7 285 1.2E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 111.51 T 22-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 SUPERFAMILY SSF52540 7 281 2.28E-107 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 SUPERFAMILY SSF50447 264 403 7.07E-36 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 Gene3D G3DSA:3.30.230.10 483 596 1.3E-50 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 PRINTS PR00315 GTP-binding elongation factor signature 94 105 6.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 PRINTS PR00315 GTP-binding elongation factor signature 58 66 6.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 PRINTS PR00315 GTP-binding elongation factor signature 130 139 6.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 PRINTS PR00315 GTP-binding elongation factor signature 12 25 6.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 PRINTS PR00315 GTP-binding elongation factor signature 78 88 6.3E-16 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 Pfam PF00679 Elongation factor G C-terminus 598 684 1.1E-31 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 SMART SM00838 598 685 3.0E-58 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 SMART SM00889 479 596 2.8E-72 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 PANTHER PTHR23115:SF66 1 177 0.0 T 22-04-2016 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 PANTHER PTHR23115:SF66 254 282 0.0 T 22-04-2016 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 PANTHER PTHR23115:SF66 302 689 0.0 T 22-04-2016 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 PANTHER PTHR23115 1 177 0.0 T 22-04-2016 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 PANTHER PTHR23115 254 282 0.0 T 22-04-2016 AMK43_RS00385 99c6974b8636e18e567e88e3fa9c9a73 692 PANTHER PTHR23115 302 689 0.0 T 22-04-2016 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 TIGRFAM TIGR01393 lepA: elongation factor 4 6 596 0.0 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 Pfam PF00009 Elongation factor Tu GTP binding domain 6 184 2.3E-52 T 22-04-2016 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 SUPERFAMILY SSF54980 297 373 3.6E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 Pfam PF03144 Elongation factor Tu domain 2 208 278 1.2E-12 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 147 3.5E-18 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 SMART SM00838 399 487 5.5E-4 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 Gene3D G3DSA:3.30.70.870 296 372 2.3E-26 T 22-04-2016 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 Gene3D G3DSA:3.40.50.300 1 196 3.7E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 PANTHER PTHR23115 398 597 4.8E-291 T 22-04-2016 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 PANTHER PTHR23115 1 376 4.8E-291 T 22-04-2016 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 SUPERFAMILY SSF52540 3 208 7.06E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 PANTHER PTHR23115:SF175 398 597 4.8E-291 T 22-04-2016 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 PANTHER PTHR23115:SF175 1 376 4.8E-291 T 22-04-2016 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 Gene3D G3DSA:2.40.30.10 197 292 1.0E-27 T 22-04-2016 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 SUPERFAMILY SSF50447 168 291 4.57E-34 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 PRINTS PR00315 GTP-binding elongation factor signature 52 60 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 PRINTS PR00315 GTP-binding elongation factor signature 129 138 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 PRINTS PR00315 GTP-binding elongation factor signature 77 87 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 PRINTS PR00315 GTP-binding elongation factor signature 93 104 2.3E-14 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 SUPERFAMILY SSF54980 400 495 6.23E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 Pfam PF06421 GTP-binding protein LepA C-terminus 490 595 2.0E-51 T 22-04-2016 IPR013842 GTP-binding protein LepA, C-terminal AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 Hamap MF_00071 Elongation factor 4 [lepA]. 1 598 298.831 T 22-04-2016 IPR006297 Elongation factor 4 GO:0005525 AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 Gene3D G3DSA:3.30.70.240 402 490 2.9E-22 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK43_RS05750 1c6252265b594819dbce452b131a1c50 598 Pfam PF00679 Elongation factor G C-terminus 400 487 2.9E-24 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK43_RS02385 5f8f839cbf06c28c56c24b75409f81a3 674 Gene3D G3DSA:2.40.170.20 156 674 1.9E-97 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMK43_RS02385 5f8f839cbf06c28c56c24b75409f81a3 674 SUPERFAMILY SSF56935 34 674 3.51E-113 T 22-04-2016 AMK43_RS02385 5f8f839cbf06c28c56c24b75409f81a3 674 Pfam PF00593 TonB dependent receptor 438 672 2.6E-32 T 22-04-2016 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 AMK43_RS02385 5f8f839cbf06c28c56c24b75409f81a3 674 PANTHER PTHR32552:SF0 1 674 9.9E-109 T 22-04-2016 AMK43_RS02385 5f8f839cbf06c28c56c24b75409f81a3 674 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 153 1.2E-19 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMK43_RS02385 5f8f839cbf06c28c56c24b75409f81a3 674 Gene3D G3DSA:2.170.130.10 28 155 1.5E-32 T 22-04-2016 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 AMK43_RS02385 5f8f839cbf06c28c56c24b75409f81a3 674 PANTHER PTHR32552 1 674 9.9E-109 T 22-04-2016 AMK43_RS11220 306b8356121e27b9e9c805203cf01503 81 Gene3D G3DSA:3.10.290.10 1 74 3.9E-19 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS11220 306b8356121e27b9e9c805203cf01503 81 PIRSF PIRSF038881 1 81 8.2E-28 T 22-04-2016 IPR025490 RNA-binding protein, HP1423 type AMK43_RS11220 306b8356121e27b9e9c805203cf01503 81 SUPERFAMILY SSF55174 1 69 3.4E-17 T 22-04-2016 AMK43_RS11220 306b8356121e27b9e9c805203cf01503 81 Pfam PF01479 S4 domain 1 47 1.2E-9 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS11220 306b8356121e27b9e9c805203cf01503 81 SMART SM00363 1 69 5.2E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS06695 c46d3e0bcaceb34deb8e0ad5aa1fee21 665 Pfam PF13505 Outer membrane protein beta-barrel domain 445 653 4.2E-11 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel AMK43_RS06695 c46d3e0bcaceb34deb8e0ad5aa1fee21 665 PANTHER PTHR35040:SF2 103 355 1.1E-31 T 22-04-2016 AMK43_RS06695 c46d3e0bcaceb34deb8e0ad5aa1fee21 665 SMART SM00869 408 658 1.4E-9 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS06695 c46d3e0bcaceb34deb8e0ad5aa1fee21 665 PANTHER PTHR35040 103 355 1.1E-31 T 22-04-2016 AMK43_RS06695 c46d3e0bcaceb34deb8e0ad5aa1fee21 665 SUPERFAMILY SSF103515 415 652 2.09E-19 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS06695 c46d3e0bcaceb34deb8e0ad5aa1fee21 665 Pfam PF12138 Spherulation-specific family 4 106 336 1.0E-35 T 22-04-2016 IPR021986 Spherulation-specific family 4 AMK43_RS06695 c46d3e0bcaceb34deb8e0ad5aa1fee21 665 Gene3D G3DSA:2.40.128.130 412 653 2.3E-18 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 SUPERFAMILY SSF102741 355 426 2.09E-13 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 PIRSF PIRSF002401 1 375 7.9E-136 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 Pfam PF01018 GTP1/OBG 2 157 1.1E-58 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 330 2.2E-134 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 359 426 6.1E-17 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 Gene3D G3DSA:2.70.210.12 1 154 2.5E-56 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 Pfam PF09269 Domain of unknown function (DUF1967) 359 425 7.4E-15 T 22-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 2.7E-32 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 2.7E-32 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 2.7E-32 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 2.7E-32 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 PANTHER PTHR11702:SF3 2 370 1.8E-151 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 PANTHER PTHR11702 2 370 1.8E-151 T 22-04-2016 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 Pfam PF01926 50S ribosome-binding GTPase 160 283 1.2E-24 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 SUPERFAMILY SSF82051 1 157 5.49E-54 T 22-04-2016 IPR006169 GTP1/OBG domain GO:0005525 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 Hamap MF_01454 GTPase Obg [obg]. 1 331 45.667 T 22-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 SUPERFAMILY SSF52540 160 336 3.05E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 22-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 AMK43_RS02985 e0534e8e21c8640c3a40da9b620af563 427 Gene3D G3DSA:3.40.50.300 155 339 3.1E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 SUPERFAMILY SSF50447 153 299 1.83E-31 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 PANTHER PTHR23115 3 592 4.3E-279 T 22-04-2016 AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 Pfam PF00679 Elongation factor G C-terminus 396 479 2.2E-20 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 Gene3D G3DSA:2.40.30.10 206 303 1.1E-28 T 22-04-2016 AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 PRINTS PR00315 GTP-binding elongation factor signature 71 81 3.3E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 PRINTS PR00315 GTP-binding elongation factor signature 123 132 3.3E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 PRINTS PR00315 GTP-binding elongation factor signature 51 59 3.3E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 PRINTS PR00315 GTP-binding elongation factor signature 7 20 3.3E-13 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 5.9E-55 T 22-04-2016 AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 SUPERFAMILY SSF54980 398 512 3.69E-27 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 137 1.1E-23 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 SUPERFAMILY SSF52540 3 207 9.06E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 SUPERFAMILY SSF54980 302 387 3.31E-15 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 Gene3D G3DSA:3.30.70.240 400 481 9.8E-30 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 598 3.2E-286 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 Gene3D G3DSA:3.40.50.300 3 205 1.3E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 Pfam PF03144 Elongation factor Tu domain 2 219 288 3.9E-10 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 Gene3D G3DSA:3.30.70.870 304 399 1.5E-35 T 22-04-2016 AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 Gene3D G3DSA:2.40.50.250 482 576 2.7E-40 T 22-04-2016 AMK43_RS05300 bf1abe2b91aae65aab205977d34e4e6f 604 PANTHER PTHR23115:SF14 3 592 4.3E-279 T 22-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 AMK43_RS05230 9143a0a3ce5f770c8e06bb5d5a3df5f0 459 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 8 74 5.5E-11 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS05230 9143a0a3ce5f770c8e06bb5d5a3df5f0 459 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 131 349 1.7E-66 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS05230 9143a0a3ce5f770c8e06bb5d5a3df5f0 459 SUPERFAMILY SSF47917 362 418 5.49E-5 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS05230 9143a0a3ce5f770c8e06bb5d5a3df5f0 459 Gene3D G3DSA:1.10.1140.10 362 420 8.6E-4 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS05230 9143a0a3ce5f770c8e06bb5d5a3df5f0 459 Hamap MF_00310 V-type ATP synthase beta chain [atpB]. 2 458 60.169 T 22-04-2016 IPR022879 V-type ATP synthase regulatory subunit B/beta AMK43_RS05230 9143a0a3ce5f770c8e06bb5d5a3df5f0 459 PANTHER PTHR15184 4 455 3.4E-269 T 22-04-2016 AMK43_RS05230 9143a0a3ce5f770c8e06bb5d5a3df5f0 459 SUPERFAMILY SSF52540 78 354 6.38E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05230 9143a0a3ce5f770c8e06bb5d5a3df5f0 459 Gene3D G3DSA:3.40.50.300 76 354 3.8E-98 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05230 9143a0a3ce5f770c8e06bb5d5a3df5f0 459 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS05230 9143a0a3ce5f770c8e06bb5d5a3df5f0 459 PIRSF PIRSF039114 1 459 3.8E-241 T 22-04-2016 IPR022879 V-type ATP synthase regulatory subunit B/beta AMK43_RS05230 9143a0a3ce5f770c8e06bb5d5a3df5f0 459 PANTHER PTHR15184:SF11 4 455 3.4E-269 T 22-04-2016 AMK43_RS04105 e38d6ecc41ab760ac40845211da8180a 307 Pfam PF02833 DHHA2 domain 180 303 1.4E-20 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 AMK43_RS04105 e38d6ecc41ab760ac40845211da8180a 307 PANTHER PTHR12112 3 306 5.6E-113 T 22-04-2016 AMK43_RS04105 e38d6ecc41ab760ac40845211da8180a 307 SUPERFAMILY SSF64182 2 304 7.59E-78 T 22-04-2016 AMK43_RS04105 e38d6ecc41ab760ac40845211da8180a 307 Pfam PF01368 DHH family 3 143 1.1E-26 T 22-04-2016 IPR001667 DDH domain AMK43_RS04105 e38d6ecc41ab760ac40845211da8180a 307 PANTHER PTHR12112:SF17 3 306 5.6E-113 T 22-04-2016 AMK43_RS04105 e38d6ecc41ab760ac40845211da8180a 307 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 2 306 43.117 T 22-04-2016 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1 AMK43_RS04105 e38d6ecc41ab760ac40845211da8180a 307 Gene3D G3DSA:3.90.1640.10 2 184 2.3E-64 T 22-04-2016 AMK43_RS04105 e38d6ecc41ab760ac40845211da8180a 307 SMART SM01131 178 304 8.9E-49 T 22-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 AMK43_RS10365 1d5d32a38eff562a8545760789b2229a 381 Gene3D G3DSA:1.25.40.10 213 249 3.4E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS10365 1d5d32a38eff562a8545760789b2229a 381 Gene3D G3DSA:1.25.40.10 295 344 3.4E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS00040 e33c9beb1052a77fedae04d1020e2857 156 PANTHER PTHR23091 1 150 1.3E-20 T 22-04-2016 AMK43_RS00040 e33c9beb1052a77fedae04d1020e2857 156 Gene3D G3DSA:3.40.630.30 1 155 3.3E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS00040 e33c9beb1052a77fedae04d1020e2857 156 SUPERFAMILY SSF55729 1 155 7.25E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS00040 e33c9beb1052a77fedae04d1020e2857 156 Pfam PF00583 Acetyltransferase (GNAT) family 62 145 7.9E-15 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 TIGRFAM TIGR01857 FGAM-synthase: phosphoribosylformylglycinamidine synthase 4 1261 0.0 T 22-04-2016 IPR010141 Phosphoribosylformylglycinamidine synthase, FGAM AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 SUPERFAMILY SSF55326 304 436 8.02E-29 T 22-04-2016 AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 SUPERFAMILY SSF55326 208 234 8.02E-29 T 22-04-2016 AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 Gene3D G3DSA:3.30.1330.10 652 809 1.5E-26 T 22-04-2016 IPR016188 PurM-like, N-terminal domain AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 SUPERFAMILY SSF52317 997 1261 4.44E-64 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 Pfam PF02769 AIR synthase related protein, C-terminal domain 446 595 5.9E-24 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 999 1261 5.4E-85 T 22-04-2016 AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 SUPERFAMILY SSF56042 445 612 6.28E-37 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 PANTHER PTHR10099 2 238 1.3E-234 T 22-04-2016 AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 PANTHER PTHR10099 265 1236 1.3E-234 T 22-04-2016 AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 SUPERFAMILY SSF56042 819 963 4.45E-15 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 SUPERFAMILY SSF55326 630 817 9.68E-39 T 22-04-2016 AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 SMART SM01211 999 1261 1.9E-107 T 22-04-2016 AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 Gene3D G3DSA:3.30.1330.10 223 238 2.0E-50 T 22-04-2016 IPR016188 PurM-like, N-terminal domain AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 Gene3D G3DSA:3.30.1330.10 295 435 2.0E-50 T 22-04-2016 IPR016188 PurM-like, N-terminal domain AMK43_RS06575 569a48aca79621e1f77dcbea64260ca9 1262 Gene3D G3DSA:3.40.50.880 999 1242 3.3E-15 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 SMART SM00388 282 349 4.0E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 SUPERFAMILY SSF158472 223 270 2.88E-7 T 22-04-2016 AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 Pfam PF00672 HAMP domain 202 266 2.7E-10 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 467 2.6E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 496 509 2.6E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 490 2.6E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 453 2.6E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 SMART SM00387 397 510 8.0E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 Pfam PF00512 His Kinase A (phospho-acceptor) domain 282 348 2.9E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 PANTHER PTHR24423 3 17 8.5E-56 T 22-04-2016 AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 PANTHER PTHR24423 216 510 8.5E-56 T 22-04-2016 AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 SMART SM00304 222 274 0.005 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 398 509 2.0E-17 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 Gene3D G3DSA:3.30.565.10 336 510 3.8E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 SUPERFAMILY SSF47384 265 349 2.75E-18 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 Gene3D G3DSA:1.10.287.130 275 335 1.3E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS03700 28e8409e889f52f1bd868a6538ee0505 510 SUPERFAMILY SSF55874 338 510 4.06E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS02150 143a936026f195e6d3acfa77d823c9a5 72 SMART SM00899 1 71 6.3E-8 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AMK43_RS02150 143a936026f195e6d3acfa77d823c9a5 72 SUPERFAMILY SSF50037 4 70 3.66E-10 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal AMK43_RS02150 143a936026f195e6d3acfa77d823c9a5 72 Pfam PF04023 FeoA domain 2 70 5.6E-11 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 Gene3D G3DSA:3.40.120.10 231 308 2.6E-21 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 PANTHER PTHR22573:SF54 22 571 2.0E-208 T 22-04-2016 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 SUPERFAMILY SSF53738 304 452 1.45E-30 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 1.5E-8 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 140 154 1.5E-8 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 230 249 1.5E-8 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 PANTHER PTHR22573 22 571 2.0E-208 T 22-04-2016 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 141 150 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 182 6.1E-39 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 324 444 2.5E-22 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 Gene3D G3DSA:3.40.120.10 309 452 7.5E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 SUPERFAMILY SSF55957 441 479 8.5E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 SUPERFAMILY SSF55957 511 570 8.5E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 SUPERFAMILY SSF53738 30 237 4.41E-45 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 Gene3D G3DSA:3.40.120.10 23 218 2.1E-58 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 211 315 4.0E-25 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 SUPERFAMILY SSF53738 220 312 4.18E-17 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 503 551 1.4E-6 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS11070 a36849797b44474ba7f9b6730cdb0161 572 Gene3D G3DSA:3.30.310.50 478 569 2.3E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS06425 2a0bd24139552a2af151c7a83460e29e 419 Pfam PF01546 Peptidase family M20/M25/M40 104 416 3.8E-31 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK43_RS06425 2a0bd24139552a2af151c7a83460e29e 419 Gene3D G3DSA:3.40.630.10 359 418 2.9E-55 T 22-04-2016 AMK43_RS06425 2a0bd24139552a2af151c7a83460e29e 419 Gene3D G3DSA:3.40.630.10 10 218 2.9E-55 T 22-04-2016 AMK43_RS06425 2a0bd24139552a2af151c7a83460e29e 419 SUPERFAMILY SSF53187 343 418 2.77E-51 T 22-04-2016 AMK43_RS06425 2a0bd24139552a2af151c7a83460e29e 419 SUPERFAMILY SSF53187 2 218 2.77E-51 T 22-04-2016 AMK43_RS06425 2a0bd24139552a2af151c7a83460e29e 419 Pfam PF07687 Peptidase dimerisation domain 206 314 7.2E-20 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS06425 2a0bd24139552a2af151c7a83460e29e 419 Gene3D G3DSA:3.30.70.360 219 310 2.7E-22 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS06425 2a0bd24139552a2af151c7a83460e29e 419 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 17 408 1.5E-76 T 22-04-2016 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase GO:0016813 AMK43_RS06425 2a0bd24139552a2af151c7a83460e29e 419 SUPERFAMILY SSF55031 210 298 9.87E-15 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS06425 2a0bd24139552a2af151c7a83460e29e 419 PANTHER PTHR11014 85 403 1.9E-62 T 22-04-2016 AMK43_RS06425 2a0bd24139552a2af151c7a83460e29e 419 PANTHER PTHR11014:SF83 85 403 1.9E-62 T 22-04-2016 AMK43_RS01340 9c48172b4e23410e3ca7114f41c9a8ec 207 PANTHER PTHR35791 4 207 4.5E-32 T 22-04-2016 AMK43_RS01340 9c48172b4e23410e3ca7114f41c9a8ec 207 Pfam PF04286 Protein of unknown function (DUF445) 14 142 1.2E-20 T 22-04-2016 IPR007383 Protein of unknown function DUF445 AMK43_RS01340 9c48172b4e23410e3ca7114f41c9a8ec 207 Pfam PF04286 Protein of unknown function (DUF445) 120 203 3.7E-9 T 22-04-2016 IPR007383 Protein of unknown function DUF445 AMK43_RS01340 9c48172b4e23410e3ca7114f41c9a8ec 207 PANTHER PTHR35791:SF1 4 207 4.5E-32 T 22-04-2016 AMK43_RS01605 7193f8bc11b65db9e8b5c42de1985dd3 312 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 113 131 3.9E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 AMK43_RS01605 7193f8bc11b65db9e8b5c42de1985dd3 312 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 3.9E-5 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 AMK43_RS01605 7193f8bc11b65db9e8b5c42de1985dd3 312 SUPERFAMILY SSF52540 8 289 1.17E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01605 7193f8bc11b65db9e8b5c42de1985dd3 312 PANTHER PTHR32204 1 303 8.8E-100 T 22-04-2016 AMK43_RS01605 7193f8bc11b65db9e8b5c42de1985dd3 312 Pfam PF07728 AAA domain (dynein-related subfamily) 40 172 9.2E-27 T 22-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 AMK43_RS01605 7193f8bc11b65db9e8b5c42de1985dd3 312 Gene3D G3DSA:3.40.50.300 22 190 1.5E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01605 7193f8bc11b65db9e8b5c42de1985dd3 312 SMART SM00382 37 182 7.5E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS08745 9c43761b2928f8ae3aa25efe8d780c5c 89 Gene3D G3DSA:3.40.630.30 1 81 5.5E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS08745 9c43761b2928f8ae3aa25efe8d780c5c 89 SUPERFAMILY SSF55729 3 80 2.92E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS08745 9c43761b2928f8ae3aa25efe8d780c5c 89 Pfam PF14542 GCN5-related N-acetyl-transferase 11 81 4.7E-23 T 22-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase AMK43_RS08745 9c43761b2928f8ae3aa25efe8d780c5c 89 PANTHER PTHR31435:SF3 1 86 8.5E-23 T 22-04-2016 AMK43_RS08745 9c43761b2928f8ae3aa25efe8d780c5c 89 PANTHER PTHR31435 1 86 8.5E-23 T 22-04-2016 AMK43_RS08135 4416a46f1436f2650c56489fe0d71d8b 345 SUPERFAMILY SSF51735 142 307 1.45E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS08135 4416a46f1436f2650c56489fe0d71d8b 345 PANTHER PTHR11695 12 344 6.1E-115 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK43_RS08135 4416a46f1436f2650c56489fe0d71d8b 345 PANTHER PTHR11695:SF38 12 344 6.1E-115 T 22-04-2016 AMK43_RS08135 4416a46f1436f2650c56489fe0d71d8b 345 Gene3D G3DSA:3.90.180.10 1 170 1.3E-53 T 22-04-2016 IPR011032 GroES-like AMK43_RS08135 4416a46f1436f2650c56489fe0d71d8b 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 139 3.7E-26 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK43_RS08135 4416a46f1436f2650c56489fe0d71d8b 345 Pfam PF00107 Zinc-binding dehydrogenase 179 303 1.7E-27 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK43_RS08135 4416a46f1436f2650c56489fe0d71d8b 345 Gene3D G3DSA:3.40.50.720 171 289 2.8E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS08135 4416a46f1436f2650c56489fe0d71d8b 345 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 AMK43_RS08135 4416a46f1436f2650c56489fe0d71d8b 345 SMART SM00829 7 342 6.5E-6 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK43_RS08135 4416a46f1436f2650c56489fe0d71d8b 345 SUPERFAMILY SSF50129 1 178 2.43E-50 T 22-04-2016 IPR011032 GroES-like AMK43_RS08340 1d7dc2c62830d9b61e0127e4af8d01d7 242 PANTHER PTHR30352:SF9 1 240 1.2E-124 T 22-04-2016 AMK43_RS08340 1d7dc2c62830d9b61e0127e4af8d01d7 242 ProSitePatterns PS01087 Radical activating enzymes signature. 16 37 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AMK43_RS08340 1d7dc2c62830d9b61e0127e4af8d01d7 242 Pfam PF13353 4Fe-4S single cluster domain 15 127 4.1E-22 T 22-04-2016 AMK43_RS08340 1d7dc2c62830d9b61e0127e4af8d01d7 242 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 4 234 4.5E-105 T 22-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 AMK43_RS08340 1d7dc2c62830d9b61e0127e4af8d01d7 242 Gene3D G3DSA:3.80.30.10 68 238 6.4E-72 T 22-04-2016 AMK43_RS08340 1d7dc2c62830d9b61e0127e4af8d01d7 242 Pfam PF04055 Radical SAM superfamily 23 179 3.9E-32 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS08340 1d7dc2c62830d9b61e0127e4af8d01d7 242 SUPERFAMILY SSF102114 21 218 2.49E-36 T 22-04-2016 AMK43_RS08340 1d7dc2c62830d9b61e0127e4af8d01d7 242 PANTHER PTHR30352 1 240 1.2E-124 T 22-04-2016 AMK43_RS08340 1d7dc2c62830d9b61e0127e4af8d01d7 242 SMART SM00729 18 228 0.0013 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK43_RS05320 e109923465fb653ca7cca845e3754b05 79 Pfam PF06803 Protein of unknown function (DUF1232) 20 55 1.4E-14 T 22-04-2016 IPR010652 Protein of unknown function DUF1232 UniPathway: UPA00143 AMK43_RS10190 b6b75f091af5e87f125938c13d24ae76 133 Hamap MF_00771 UPF0310 protein . 1 132 26.924 T 22-04-2016 IPR022996 Uncharacterised protein family UPF0310 AMK43_RS10190 b6b75f091af5e87f125938c13d24ae76 133 Pfam PF01878 EVE domain 2 130 1.7E-18 T 22-04-2016 IPR002740 EVE domain AMK43_RS10190 b6b75f091af5e87f125938c13d24ae76 133 Gene3D G3DSA:3.10.590.10 1 132 1.0E-28 T 22-04-2016 IPR002740 EVE domain AMK43_RS10190 b6b75f091af5e87f125938c13d24ae76 133 SUPERFAMILY SSF88697 1 132 6.21E-28 T 22-04-2016 IPR015947 PUA-like domain AMK43_RS10015 fcee7b84503d8ba13cbd1d5d9fadf82e 331 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 15 163 7.0E-51 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK43_RS10015 fcee7b84503d8ba13cbd1d5d9fadf82e 331 Gene3D G3DSA:3.30.1060.10 7 164 5.9E-64 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK43_RS10015 fcee7b84503d8ba13cbd1d5d9fadf82e 331 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 14 169 35.067 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK43_RS10015 fcee7b84503d8ba13cbd1d5d9fadf82e 331 Pfam PF01641 SelR domain 187 307 7.5E-45 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK43_RS10015 fcee7b84503d8ba13cbd1d5d9fadf82e 331 Gene3D G3DSA:2.170.150.20 178 322 1.4E-57 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK43_RS10015 fcee7b84503d8ba13cbd1d5d9fadf82e 331 SUPERFAMILY SSF51316 181 321 1.15E-57 T 22-04-2016 IPR011057 Mss4-like AMK43_RS10015 fcee7b84503d8ba13cbd1d5d9fadf82e 331 PANTHER PTHR10173 286 330 2.0E-97 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 AMK43_RS10015 fcee7b84503d8ba13cbd1d5d9fadf82e 331 PANTHER PTHR10173 10 157 2.0E-97 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 AMK43_RS10015 fcee7b84503d8ba13cbd1d5d9fadf82e 331 SUPERFAMILY SSF55068 11 170 5.89E-61 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK43_RS10015 fcee7b84503d8ba13cbd1d5d9fadf82e 331 Pfam PF01625 Peptide methionine sulfoxide reductase 16 164 9.2E-58 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK43_RS10015 fcee7b84503d8ba13cbd1d5d9fadf82e 331 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 184 308 34.935 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK43_RS10015 fcee7b84503d8ba13cbd1d5d9fadf82e 331 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 182 316 5.2E-64 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK43_RS10015 fcee7b84503d8ba13cbd1d5d9fadf82e 331 PANTHER PTHR10173:SF40 286 330 2.0E-97 T 22-04-2016 AMK43_RS10015 fcee7b84503d8ba13cbd1d5d9fadf82e 331 PANTHER PTHR10173:SF40 10 157 2.0E-97 T 22-04-2016 AMK43_RS00760 bc43d35164208a3b9a4a861db16a9a1e 501 PANTHER PTHR21091 1 241 1.2E-70 T 22-04-2016 AMK43_RS00760 bc43d35164208a3b9a4a861db16a9a1e 501 PANTHER PTHR21091:SF16 1 241 1.2E-70 T 22-04-2016 AMK43_RS00760 bc43d35164208a3b9a4a861db16a9a1e 501 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 85 118 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK43_RS00760 bc43d35164208a3b9a4a861db16a9a1e 501 Gene3D G3DSA:3.40.50.10090 393 496 2.0E-15 T 22-04-2016 AMK43_RS00760 bc43d35164208a3b9a4a861db16a9a1e 501 Gene3D G3DSA:3.40.1010.10 4 120 2.2E-35 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AMK43_RS00760 bc43d35164208a3b9a4a861db16a9a1e 501 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 5 240 1.2E-87 T 22-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK43_RS00760 bc43d35164208a3b9a4a861db16a9a1e 501 SUPERFAMILY SSF69618 253 492 7.32E-40 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00760 bc43d35164208a3b9a4a861db16a9a1e 501 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 215 7.9E-47 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK43_RS00760 bc43d35164208a3b9a4a861db16a9a1e 501 SUPERFAMILY SSF53790 4 256 5.63E-71 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK43_RS00760 bc43d35164208a3b9a4a861db16a9a1e 501 Pfam PF02602 Uroporphyrinogen-III synthase HemD 267 487 4.1E-32 T 22-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00760 bc43d35164208a3b9a4a861db16a9a1e 501 Gene3D G3DSA:3.30.950.10 121 257 5.9E-53 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 AMK43_RS00760 bc43d35164208a3b9a4a861db16a9a1e 501 Gene3D G3DSA:3.40.50.10090 258 364 1.4E-17 T 22-04-2016 AMK43_RS02405 7e7b3cd378a32a3e461f2f5e76cbfa1e 296 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 219 295 9.6E-8 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 AMK43_RS02405 7e7b3cd378a32a3e461f2f5e76cbfa1e 296 SUPERFAMILY SSF74653 208 296 2.75E-8 T 22-04-2016 AMK43_RS02405 7e7b3cd378a32a3e461f2f5e76cbfa1e 296 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 222 296 8.5E-9 T 22-04-2016 IPR006260 TonB, C-terminal GO:0006810 AMK43_RS02405 7e7b3cd378a32a3e461f2f5e76cbfa1e 296 Gene3D G3DSA:3.30.1150.10 190 296 1.5E-5 T 22-04-2016 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 5 481 4.4E-155 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 23 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 SUPERFAMILY SSF50249 531 630 7.1E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 Gene3D G3DSA:1.10.730.10 342 508 6.8E-50 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 PRINTS PR01041 Methionyl-tRNA synthetase signature 220 231 5.8E-30 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 PRINTS PR01041 Methionyl-tRNA synthetase signature 254 269 5.8E-30 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 PRINTS PR01041 Methionyl-tRNA synthetase signature 39 53 5.8E-30 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 5.8E-30 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 PRINTS PR01041 Methionyl-tRNA synthetase signature 346 357 5.8E-30 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 PRINTS PR01041 Methionyl-tRNA synthetase signature 87 98 5.8E-30 T 22-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 507 46.509 T 22-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 Pfam PF01588 Putative tRNA binding domain 538 630 7.5E-21 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 Gene3D G3DSA:3.40.50.620 4 341 1.0E-106 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 SUPERFAMILY SSF52374 4 349 7.24E-104 T 22-04-2016 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 SUPERFAMILY SSF47323 347 508 4.49E-42 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 Gene3D G3DSA:2.40.50.140 525 632 1.2E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 Pfam PF08264 Anticodon-binding domain of tRNA 383 473 4.0E-10 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 PANTHER PTHR11946 5 589 4.4E-260 T 22-04-2016 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 Pfam PF09334 tRNA synthetases class I (M) 151 358 1.3E-68 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 Pfam PF09334 tRNA synthetases class I (M) 5 138 1.0E-40 T 22-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS07115 44972b36a2e73833f0c256c7f4004c75 633 PANTHER PTHR11946:SF1 5 589 4.4E-260 T 22-04-2016 AMK43_RS03575 9c03b169f5365cd32de7468d56ab01ab 526 SUPERFAMILY SSF55604 451 525 8.76E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS03575 9c03b169f5365cd32de7468d56ab01ab 526 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 464 481 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMK43_RS03575 9c03b169f5365cd32de7468d56ab01ab 526 Pfam PF00367 phosphotransferase system, EIIB 455 484 4.5E-15 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMK43_RS03575 9c03b169f5365cd32de7468d56ab01ab 526 PANTHER PTHR30009:SF12 2 525 9.4E-261 T 22-04-2016 AMK43_RS03575 9c03b169f5365cd32de7468d56ab01ab 526 Gene3D G3DSA:3.30.1360.60 448 525 2.4E-26 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS03575 9c03b169f5365cd32de7468d56ab01ab 526 Pfam PF02378 Phosphotransferase system, EIIC 10 343 4.9E-68 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMK43_RS03575 9c03b169f5365cd32de7468d56ab01ab 526 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 406 511 3.2E-23 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS03575 9c03b169f5365cd32de7468d56ab01ab 526 PANTHER PTHR30009 2 525 9.4E-261 T 22-04-2016 AMK43_RS03575 9c03b169f5365cd32de7468d56ab01ab 526 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 2 525 5.2E-259 T 22-04-2016 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 AMK43_RS10065 9e59e50deedf5ba9809012c89fe50c97 283 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 7 282 1.5E-113 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMK43_RS10065 9e59e50deedf5ba9809012c89fe50c97 283 PANTHER PTHR11564:SF16 3 282 9.5E-130 T 22-04-2016 AMK43_RS10065 9e59e50deedf5ba9809012c89fe50c97 283 Gene3D G3DSA:3.40.50.300 93 282 1.6E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10065 9e59e50deedf5ba9809012c89fe50c97 283 SUPERFAMILY SSF47364 2 57 5.76E-14 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK43_RS10065 9e59e50deedf5ba9809012c89fe50c97 283 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 6 283 60.908 T 22-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 AMK43_RS10065 9e59e50deedf5ba9809012c89fe50c97 283 SMART SM00382 81 234 4.6E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS10065 9e59e50deedf5ba9809012c89fe50c97 283 Gene3D G3DSA:1.20.120.140 7 92 7.5E-24 T 22-04-2016 AMK43_RS10065 9e59e50deedf5ba9809012c89fe50c97 283 Pfam PF00448 SRP54-type protein, GTPase domain 83 282 3.1E-78 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK43_RS10065 9e59e50deedf5ba9809012c89fe50c97 283 SUPERFAMILY SSF52540 83 282 1.55E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10065 9e59e50deedf5ba9809012c89fe50c97 283 Pfam PF02881 SRP54-type protein, helical bundle domain 5 57 5.9E-11 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK43_RS10065 9e59e50deedf5ba9809012c89fe50c97 283 PANTHER PTHR11564 3 282 9.5E-130 T 22-04-2016 AMK43_RS10065 9e59e50deedf5ba9809012c89fe50c97 283 SMART SM00962 82 283 3.0E-110 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK43_RS10065 9e59e50deedf5ba9809012c89fe50c97 283 SMART SM00963 1 63 4.8E-6 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK43_RS10065 9e59e50deedf5ba9809012c89fe50c97 283 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 256 269 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK43_RS00450 cf3a3aa42fedfa554d71bc6ba9ca5b3c 122 SUPERFAMILY SSF50193 1 122 3.79E-51 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK43_RS00450 cf3a3aa42fedfa554d71bc6ba9ca5b3c 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.5E-55 T 22-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK43_RS00450 cf3a3aa42fedfa554d71bc6ba9ca5b3c 122 SMART SM01374 1 122 4.2E-85 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK43_RS00450 cf3a3aa42fedfa554d71bc6ba9ca5b3c 122 Gene3D G3DSA:2.40.150.20 1 122 5.8E-53 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK43_RS00450 cf3a3aa42fedfa554d71bc6ba9ca5b3c 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.1E-54 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK43_RS00450 cf3a3aa42fedfa554d71bc6ba9ca5b3c 122 PANTHER PTHR11761 1 122 4.1E-76 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK43_RS00450 cf3a3aa42fedfa554d71bc6ba9ca5b3c 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.557 T 22-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 AMK43_RS00450 cf3a3aa42fedfa554d71bc6ba9ca5b3c 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 22-04-2016 IPR019972 Ribosomal protein L14P, conserved site AMK43_RS06980 20ac23d99a21baffb7508fb4b289ccaa 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 2.1E-38 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS06980 20ac23d99a21baffb7508fb4b289ccaa 320 Gene3D G3DSA:1.10.3720.10 88 314 6.8E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS06980 20ac23d99a21baffb7508fb4b289ccaa 320 PANTHER PTHR30465 1 319 1.3E-110 T 22-04-2016 AMK43_RS06980 20ac23d99a21baffb7508fb4b289ccaa 320 PANTHER PTHR30465:SF24 1 319 1.3E-110 T 22-04-2016 AMK43_RS06980 20ac23d99a21baffb7508fb4b289ccaa 320 SUPERFAMILY SSF161098 91 306 1.02E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS10355 5cba9058a6de3d9e6d975e757a43c468 378 SUPERFAMILY SSF53383 26 378 2.66E-104 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS10355 5cba9058a6de3d9e6d975e757a43c468 378 PIRSF PIRSF001434 1 378 4.3E-132 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK43_RS10355 5cba9058a6de3d9e6d975e757a43c468 378 Gene3D G3DSA:3.40.640.10 1 243 1.5E-91 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS10355 5cba9058a6de3d9e6d975e757a43c468 378 PANTHER PTHR11808 1 378 5.1E-170 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK43_RS10355 5cba9058a6de3d9e6d975e757a43c468 378 Gene3D G3DSA:3.90.1150.10 244 377 5.5E-41 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS10355 5cba9058a6de3d9e6d975e757a43c468 378 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK43_RS10355 5cba9058a6de3d9e6d975e757a43c468 378 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 377 1.4E-137 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 Pfam PF06733 DEAD_2 299 373 6.9E-9 T 22-04-2016 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 SMART SM00487 134 411 1.2E-4 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 SMART SM00491 664 793 1.3E-25 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 Pfam PF13307 Helicase C-terminal domain 644 806 3.5E-41 T 22-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 Pfam PF00270 DEAD/DEAH box helicase 152 234 1.9E-5 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 SUPERFAMILY SSF52540 298 377 5.2E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 SUPERFAMILY SSF52540 152 206 5.2E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 SUPERFAMILY SSF52540 570 787 5.2E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 PANTHER PTHR11472 114 805 8.4E-176 T 22-04-2016 AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 SMART SM00488 136 411 3.2E-4 T 22-04-2016 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 Gene3D G3DSA:3.40.50.300 667 789 1.0E-7 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 PANTHER PTHR11472:SF37 114 805 8.4E-176 T 22-04-2016 AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 68 73 - T 22-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 Gene3D G3DSA:3.40.50.300 129 258 1.6E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 Gene3D G3DSA:3.40.50.300 315 391 1.6E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04080 e8eabfc351a02ded08c78c1794144518 823 Gene3D G3DSA:3.40.140.10 11 87 2.9E-8 T 22-04-2016 AMK43_RS04650 b1340ec7e1428a9a7a103f1e7f37b5e7 248 PANTHER PTHR24220:SF327 7 247 7.4E-115 T 22-04-2016 AMK43_RS04650 b1340ec7e1428a9a7a103f1e7f37b5e7 248 SMART SM00382 30 221 6.4E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS04650 b1340ec7e1428a9a7a103f1e7f37b5e7 248 Pfam PF00005 ABC transporter 21 172 6.0E-38 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS04650 b1340ec7e1428a9a7a103f1e7f37b5e7 248 PIRSF PIRSF039085 2 248 3.1E-99 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMK43_RS04650 b1340ec7e1428a9a7a103f1e7f37b5e7 248 Gene3D G3DSA:3.40.50.300 4 245 4.9E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04650 b1340ec7e1428a9a7a103f1e7f37b5e7 248 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS04650 b1340ec7e1428a9a7a103f1e7f37b5e7 248 SUPERFAMILY SSF52540 5 244 2.79E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04650 b1340ec7e1428a9a7a103f1e7f37b5e7 248 PANTHER PTHR24220 7 247 7.4E-115 T 22-04-2016 AMK43_RS00750 275eee2af36c574ea2d18b250244bf42 229 Gene3D G3DSA:3.40.50.1240 1 223 8.1E-89 T 22-04-2016 IPR029033 Histidine phosphatase superfamily AMK43_RS00750 275eee2af36c574ea2d18b250244bf42 229 SMART SM00855 2 189 2.2E-24 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK43_RS00750 275eee2af36c574ea2d18b250244bf42 229 PANTHER PTHR11931 1 224 1.5E-134 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 AMK43_RS00750 275eee2af36c574ea2d18b250244bf42 229 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 138 7.5E-30 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK43_RS00750 275eee2af36c574ea2d18b250244bf42 229 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 1 225 4.7E-107 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 AMK43_RS00750 275eee2af36c574ea2d18b250244bf42 229 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 AMK43_RS00750 275eee2af36c574ea2d18b250244bf42 229 SUPERFAMILY SSF53254 1 220 1.44E-73 T 22-04-2016 IPR029033 Histidine phosphatase superfamily AMK43_RS00750 275eee2af36c574ea2d18b250244bf42 229 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 43.227 T 22-04-2016 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484|UniPathway: UPA00109 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 260 265 3.1E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 220 229 3.1E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 282 296 3.1E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 129 146 3.1E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 75 84 3.1E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 36 58 3.1E-38 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 142 2.5E-41 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 SUPERFAMILY SSF53671 1 303 1.19E-94 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 PANTHER PTHR11405 1 301 8.8E-144 T 22-04-2016 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 298 2.9E-30 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 303 37.469 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 46 65 1.9E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 1.9E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 130 141 1.9E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 289 1.9E-25 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 PANTHER PTHR11405:SF39 1 301 8.8E-144 T 22-04-2016 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 46 53 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 Gene3D G3DSA:3.40.50.1370 1 141 4.5E-50 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 Gene3D G3DSA:3.40.50.1370 142 288 8.3E-58 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS04990 753b65a7f3291658397b614dc2663762 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 301 9.9E-119 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 PANTHER PTHR11361:SF14 32 598 3.4E-203 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 SMART SM00534 325 510 2.0E-61 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 SUPERFAMILY SSF48334 63 284 8.76E-16 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 PIRSF PIRSF005814 1 779 1.3E-230 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 TIGRFAM TIGR01069 mutS2: MutS2 family protein 2 779 5.2E-189 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 SMART SM00533 9 312 4.3E-6 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 Pfam PF01713 Smr domain 704 779 2.0E-19 T 22-04-2016 IPR002625 Smr domain AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 PANTHER PTHR11361 32 598 3.4E-203 T 22-04-2016 AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 1 778 19.951 T 22-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 Gene3D G3DSA:3.40.50.300 290 513 6.8E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 407 423 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 SMART SM00463 701 779 6.0E-11 T 22-04-2016 IPR002625 Smr domain AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 SUPERFAMILY SSF52540 289 513 1.23E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 SUPERFAMILY SSF160443 703 778 8.89E-9 T 22-04-2016 IPR002625 Smr domain AMK43_RS02080 bc46565926a7861e56bd8f88da4a6cb8 779 Pfam PF00488 MutS domain V 328 509 6.1E-32 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK43_RS06585 b11a5858e1e31964e36d2bd77bd2096e 548 SUPERFAMILY SSF109755 337 544 7.43E-45 T 22-04-2016 AMK43_RS06585 b11a5858e1e31964e36d2bd77bd2096e 548 Pfam PF01895 PhoU domain 458 542 5.9E-11 T 22-04-2016 IPR026022 PhoU domain AMK43_RS06585 b11a5858e1e31964e36d2bd77bd2096e 548 Pfam PF01895 PhoU domain 354 439 1.1E-12 T 22-04-2016 IPR026022 PhoU domain AMK43_RS06585 b11a5858e1e31964e36d2bd77bd2096e 548 PANTHER PTHR10010 1 460 5.0E-107 T 22-04-2016 AMK43_RS06585 b11a5858e1e31964e36d2bd77bd2096e 548 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 16 322 5.9E-67 T 22-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 AMK43_RS06585 b11a5858e1e31964e36d2bd77bd2096e 548 Pfam PF02690 Na+/Pi-cotransporter 169 266 1.5E-15 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 AMK43_RS06585 b11a5858e1e31964e36d2bd77bd2096e 548 Pfam PF02690 Na+/Pi-cotransporter 23 158 2.0E-46 T 22-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 AMK43_RS06585 b11a5858e1e31964e36d2bd77bd2096e 548 Gene3D G3DSA:1.20.58.220 454 544 1.3E-16 T 22-04-2016 AMK43_RS06585 b11a5858e1e31964e36d2bd77bd2096e 548 Gene3D G3DSA:1.20.58.220 343 445 3.0E-18 T 22-04-2016 AMK43_RS06585 b11a5858e1e31964e36d2bd77bd2096e 548 PANTHER PTHR10010:SF26 1 460 5.0E-107 T 22-04-2016 AMK43_RS08755 76f2685c734f11bf3c63487e46615a2d 93 Gene3D G3DSA:2.60.120.10 12 91 2.1E-13 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK43_RS08755 76f2685c734f11bf3c63487e46615a2d 93 Pfam PF07883 Cupin domain 25 70 1.7E-6 T 22-04-2016 IPR013096 Cupin 2, conserved barrel AMK43_RS08755 76f2685c734f11bf3c63487e46615a2d 93 SUPERFAMILY SSF51182 11 71 1.46E-11 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK43_RS00545 8ef29b3e7c57b57fb2cd03976f35d50e 909 SUPERFAMILY SSF46785 842 895 9.72E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS00545 8ef29b3e7c57b57fb2cd03976f35d50e 909 PANTHER PTHR22683 315 892 3.4E-176 T 22-04-2016 AMK43_RS00545 8ef29b3e7c57b57fb2cd03976f35d50e 909 Gene3D G3DSA:3.40.50.300 537 815 6.7E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00545 8ef29b3e7c57b57fb2cd03976f35d50e 909 Pfam PF09397 Ftsk gamma domain 845 895 9.9E-18 T 22-04-2016 IPR018541 FtsK gamma domain AMK43_RS00545 8ef29b3e7c57b57fb2cd03976f35d50e 909 SMART SM00382 597 778 4.9E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS00545 8ef29b3e7c57b57fb2cd03976f35d50e 909 Pfam PF01580 FtsK/SpoIIIE family 573 694 4.0E-37 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMK43_RS00545 8ef29b3e7c57b57fb2cd03976f35d50e 909 Pfam PF01580 FtsK/SpoIIIE family 699 748 1.1E-13 T 22-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 AMK43_RS00545 8ef29b3e7c57b57fb2cd03976f35d50e 909 SMART SM00843 842 902 4.1E-14 T 22-04-2016 IPR018541 FtsK gamma domain AMK43_RS00545 8ef29b3e7c57b57fb2cd03976f35d50e 909 PANTHER PTHR22683:SF41 315 892 3.4E-176 T 22-04-2016 AMK43_RS00545 8ef29b3e7c57b57fb2cd03976f35d50e 909 SUPERFAMILY SSF52540 538 816 1.39E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04165 84b0eda97f0cea881977355a6afdd9a4 150 Pfam PF07007 Protein of unknown function (DUF1311) 58 139 6.2E-14 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 AMK43_RS08840 47e300aa8d53cbfd3a68a1fc19ae5475 373 Pfam PF05175 Methyltransferase small domain 192 298 3.5E-20 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 AMK43_RS08840 47e300aa8d53cbfd3a68a1fc19ae5475 373 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 270 276 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK43_RS08840 47e300aa8d53cbfd3a68a1fc19ae5475 373 PANTHER PTHR18895 53 367 1.9E-92 T 22-04-2016 AMK43_RS08840 47e300aa8d53cbfd3a68a1fc19ae5475 373 Gene3D G3DSA:1.10.8.10 86 171 2.3E-15 T 22-04-2016 AMK43_RS08840 47e300aa8d53cbfd3a68a1fc19ae5475 373 SUPERFAMILY SSF53335 88 351 8.66E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS08840 47e300aa8d53cbfd3a68a1fc19ae5475 373 Gene3D G3DSA:3.40.50.150 173 366 7.2E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS08840 47e300aa8d53cbfd3a68a1fc19ae5475 373 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 111 362 2.8E-84 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMK43_RS08840 47e300aa8d53cbfd3a68a1fc19ae5475 373 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 87 366 39.089 T 22-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 AMK43_RS08840 47e300aa8d53cbfd3a68a1fc19ae5475 373 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 92 366 7.9E-72 T 22-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 AMK43_RS08840 47e300aa8d53cbfd3a68a1fc19ae5475 373 PANTHER PTHR18895:SF64 53 367 1.9E-92 T 22-04-2016 AMK43_RS08840 47e300aa8d53cbfd3a68a1fc19ae5475 373 Gene3D G3DSA:1.10.8.10 3 61 9.4E-7 T 22-04-2016 AMK43_RS04680 23ed4687d6c164e2550e08296ffec7e9 163 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 163 24.376 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AMK43_RS04680 23ed4687d6c164e2550e08296ffec7e9 163 Gene3D G3DSA:3.30.110.10 73 163 2.7E-25 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AMK43_RS04680 23ed4687d6c164e2550e08296ffec7e9 163 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 69 2.2E-34 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AMK43_RS04680 23ed4687d6c164e2550e08296ffec7e9 163 PANTHER PTHR10938 1 163 3.9E-57 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AMK43_RS04680 23ed4687d6c164e2550e08296ffec7e9 163 Gene3D G3DSA:3.10.20.80 1 72 5.2E-36 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AMK43_RS04680 23ed4687d6c164e2550e08296ffec7e9 163 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 78 162 3.0E-24 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AMK43_RS04680 23ed4687d6c164e2550e08296ffec7e9 163 SUPERFAMILY SSF54364 1 72 9.94E-30 T 22-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 AMK43_RS04680 23ed4687d6c164e2550e08296ffec7e9 163 ProSitePatterns PS00938 Initiation factor 3 signature. 52 65 - T 22-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 AMK43_RS04680 23ed4687d6c164e2550e08296ffec7e9 163 SUPERFAMILY SSF55200 77 163 3.66E-22 T 22-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 AMK43_RS04680 23ed4687d6c164e2550e08296ffec7e9 163 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 163 8.6E-61 T 22-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 AMK43_RS01790 ad848b59963650838271cc37db4c36a9 371 Gene3D G3DSA:3.80.30.20 14 241 5.9E-43 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMK43_RS01790 ad848b59963650838271cc37db4c36a9 371 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 15 333 1.2E-86 T 22-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- AMK43_RS01790 ad848b59963650838271cc37db4c36a9 371 Pfam PF04055 Radical SAM superfamily 19 179 1.4E-22 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS01790 ad848b59963650838271cc37db4c36a9 371 SUPERFAMILY SSF102114 15 371 3.14E-99 T 22-04-2016 AMK43_RS01790 ad848b59963650838271cc37db4c36a9 371 PANTHER PTHR13932:SF5 6 371 1.2E-122 T 22-04-2016 AMK43_RS01790 ad848b59963650838271cc37db4c36a9 371 PANTHER PTHR13932 6 371 1.2E-122 T 22-04-2016 AMK43_RS01790 ad848b59963650838271cc37db4c36a9 371 SMART SM00729 13 225 3.4E-56 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK43_RS05085 f82c3dc7573898c4787007cfa3fa70d9 163 PANTHER PTHR11839 19 153 4.3E-29 T 22-04-2016 AMK43_RS05085 f82c3dc7573898c4787007cfa3fa70d9 163 Gene3D G3DSA:3.90.79.10 20 162 5.8E-35 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK43_RS05085 f82c3dc7573898c4787007cfa3fa70d9 163 Pfam PF00293 NUDIX domain 28 147 1.3E-18 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK43_RS05085 f82c3dc7573898c4787007cfa3fa70d9 163 ProSitePatterns PS00893 Nudix box signature. 62 83 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK43_RS05085 f82c3dc7573898c4787007cfa3fa70d9 163 SUPERFAMILY SSF55811 18 148 2.98E-28 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK43_RS08355 93c6b5068bd6c259a85ceab1ecd100a6 262 Gene3D G3DSA:3.30.420.40 99 257 6.7E-43 T 22-04-2016 AMK43_RS08355 93c6b5068bd6c259a85ceab1ecd100a6 262 Pfam PF03309 Type III pantothenate kinase 2 207 5.3E-52 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AMK43_RS08355 93c6b5068bd6c259a85ceab1ecd100a6 262 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 244 4.0E-49 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AMK43_RS08355 93c6b5068bd6c259a85ceab1ecd100a6 262 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 255 27.632 T 22-04-2016 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|UniPathway: UPA00241 AMK43_RS08355 93c6b5068bd6c259a85ceab1ecd100a6 262 Gene3D G3DSA:3.30.420.40 1 63 1.6E-4 T 22-04-2016 AMK43_RS08355 93c6b5068bd6c259a85ceab1ecd100a6 262 PANTHER PTHR34265 1 262 5.0E-51 T 22-04-2016 AMK43_RS08355 93c6b5068bd6c259a85ceab1ecd100a6 262 SUPERFAMILY SSF53067 1 124 2.35E-23 T 22-04-2016 AMK43_RS08355 93c6b5068bd6c259a85ceab1ecd100a6 262 SUPERFAMILY SSF53067 127 251 9.71E-33 T 22-04-2016 AMK43_RS06810 7ac54aec900af2ce4dec5e336d57d7a5 318 PANTHER PTHR30160 1 309 8.1E-76 T 22-04-2016 AMK43_RS06810 7ac54aec900af2ce4dec5e336d57d7a5 318 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 4 312 1.0E-62 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 AMK43_RS06810 7ac54aec900af2ce4dec5e336d57d7a5 318 PANTHER PTHR30160:SF13 1 309 8.1E-76 T 22-04-2016 AMK43_RS06810 7ac54aec900af2ce4dec5e336d57d7a5 318 SUPERFAMILY SSF52540 34 188 5.32E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06810 7ac54aec900af2ce4dec5e336d57d7a5 318 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 3 318 24.567 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 AMK43_RS06810 7ac54aec900af2ce4dec5e336d57d7a5 318 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 1 313 2.3E-81 T 22-04-2016 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130|UniPathway: UPA00359 AMK43_RS00945 2a4d288d642f99cb6dd12b2b8cd7ec46 201 Pfam PF10400 Virulence activator alpha C-term 96 199 6.2E-5 T 22-04-2016 IPR018309 Transcription regulator PadR, C-terminal AMK43_RS00945 2a4d288d642f99cb6dd12b2b8cd7ec46 201 Gene3D G3DSA:1.10.10.10 3 83 1.4E-14 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS00945 2a4d288d642f99cb6dd12b2b8cd7ec46 201 Pfam PF03551 Transcriptional regulator PadR-like family 5 76 1.0E-6 T 22-04-2016 IPR005149 Transcription regulator PadR, N-terminal AMK43_RS00945 2a4d288d642f99cb6dd12b2b8cd7ec46 201 SUPERFAMILY SSF46785 3 133 6.13E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS06730 58b8ff40d5ab0cd555cbae3d8e971eee 130 PANTHER PTHR31793:SF9 7 128 5.3E-41 T 22-04-2016 AMK43_RS06730 58b8ff40d5ab0cd555cbae3d8e971eee 130 PANTHER PTHR31793 7 128 5.3E-41 T 22-04-2016 AMK43_RS06730 58b8ff40d5ab0cd555cbae3d8e971eee 130 Pfam PF13279 Thioesterase-like superfamily 13 127 3.6E-12 T 22-04-2016 AMK43_RS06730 58b8ff40d5ab0cd555cbae3d8e971eee 130 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 8 25 - T 22-04-2016 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 AMK43_RS06730 58b8ff40d5ab0cd555cbae3d8e971eee 130 Gene3D G3DSA:3.10.129.10 4 127 1.1E-39 T 22-04-2016 IPR029069 HotDog domain AMK43_RS06730 58b8ff40d5ab0cd555cbae3d8e971eee 130 SUPERFAMILY SSF54637 5 128 1.1E-33 T 22-04-2016 IPR029069 HotDog domain AMK43_RS06730 58b8ff40d5ab0cd555cbae3d8e971eee 130 PIRSF PIRSF003230 1 130 6.1E-39 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMK43_RS06730 58b8ff40d5ab0cd555cbae3d8e971eee 130 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 6 114 7.1E-31 T 22-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 AMK43_RS03020 f9f339bbca5bf9b28d6dc94dba101164 214 Gene3D G3DSA:3.40.50.300 4 199 4.6E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03020 f9f339bbca5bf9b28d6dc94dba101164 214 PANTHER PTHR10285 4 195 1.4E-79 T 22-04-2016 AMK43_RS03020 f9f339bbca5bf9b28d6dc94dba101164 214 SUPERFAMILY SSF52540 6 199 5.5E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03020 f9f339bbca5bf9b28d6dc94dba101164 214 TIGRFAM TIGR00235 udk: uridine kinase 4 207 1.4E-73 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 AMK43_RS03020 f9f339bbca5bf9b28d6dc94dba101164 214 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 194 5.5E-44 T 22-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 AMK43_RS03020 f9f339bbca5bf9b28d6dc94dba101164 214 PRINTS PR00988 Uridine kinase signature 174 187 5.5E-31 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 AMK43_RS03020 f9f339bbca5bf9b28d6dc94dba101164 214 PRINTS PR00988 Uridine kinase signature 37 48 5.5E-31 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 AMK43_RS03020 f9f339bbca5bf9b28d6dc94dba101164 214 PRINTS PR00988 Uridine kinase signature 82 97 5.5E-31 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 AMK43_RS03020 f9f339bbca5bf9b28d6dc94dba101164 214 PRINTS PR00988 Uridine kinase signature 5 22 5.5E-31 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 AMK43_RS03020 f9f339bbca5bf9b28d6dc94dba101164 214 PRINTS PR00988 Uridine kinase signature 152 163 5.5E-31 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 AMK43_RS03020 f9f339bbca5bf9b28d6dc94dba101164 214 PRINTS PR00988 Uridine kinase signature 138 148 5.5E-31 T 22-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 AMK43_RS01035 c6d15867d74cd0b7cfce369a770e6758 403 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 9 200 6.4E-83 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK43_RS01035 c6d15867d74cd0b7cfce369a770e6758 403 PANTHER PTHR21327 1 402 3.0E-213 T 22-04-2016 AMK43_RS01035 c6d15867d74cd0b7cfce369a770e6758 403 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 211 399 9.6E-75 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMK43_RS01035 c6d15867d74cd0b7cfce369a770e6758 403 Gene3D G3DSA:3.90.870.10 2 213 3.8E-94 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK43_RS01035 c6d15867d74cd0b7cfce369a770e6758 403 PIRSF PIRSF001259 3 403 1.2E-165 T 22-04-2016 AMK43_RS01035 c6d15867d74cd0b7cfce369a770e6758 403 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 4 397 51.352 T 22-04-2016 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275|UniPathway: UPA00275 AMK43_RS01035 c6d15867d74cd0b7cfce369a770e6758 403 SUPERFAMILY SSF55821 3 205 1.08E-80 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK43_RS01035 c6d15867d74cd0b7cfce369a770e6758 403 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 3 205 37.173 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK43_RS01035 c6d15867d74cd0b7cfce369a770e6758 403 SUPERFAMILY SSF142695 206 377 2.75E-62 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMK43_RS01035 c6d15867d74cd0b7cfce369a770e6758 403 Pfam PF00925 GTP cyclohydrolase II 211 373 3.2E-66 T 22-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMK43_RS01035 c6d15867d74cd0b7cfce369a770e6758 403 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 5 201 1.4E-72 T 22-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK43_RS01035 c6d15867d74cd0b7cfce369a770e6758 403 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 206 401 38.824 T 22-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 AMK43_RS01035 c6d15867d74cd0b7cfce369a770e6758 403 PANTHER PTHR21327:SF6 1 402 3.0E-213 T 22-04-2016 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 466 481 1.8E-27 T 22-04-2016 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 502 514 1.8E-27 T 22-04-2016 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 449 464 1.8E-27 T 22-04-2016 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 295 314 1.8E-27 T 22-04-2016 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 4 566 1.3E-211 T 22-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 Gene3D G3DSA:3.20.20.60 258 566 3.7E-111 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 Gene3D G3DSA:3.50.30.10 135 257 5.0E-39 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 SUPERFAMILY SSF47831 28 145 4.58E-31 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 186 197 - T 22-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 Pfam PF05524 PEP-utilising enzyme, N-terminal 5 128 2.3E-29 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 253 542 5.9E-119 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 Pfam PF00391 PEP-utilising enzyme, mobile domain 154 227 5.4E-22 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 SUPERFAMILY SSF52009 127 246 3.27E-33 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 Gene3D G3DSA:1.10.274.10 28 134 8.6E-37 T 22-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 PIRSF PIRSF000732 1 568 5.5E-217 T 22-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 SUPERFAMILY SSF51621 251 550 3.93E-106 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK43_RS05170 91fac8c637ed635195b284f685412609 569 PANTHER PTHR22931 68 552 8.4E-187 T 22-04-2016 AMK43_RS00985 010534c149798cb326e57f9b6c2f3fc0 571 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 278 6.9E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00985 010534c149798cb326e57f9b6c2f3fc0 571 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 376 553 7.1E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00985 010534c149798cb326e57f9b6c2f3fc0 571 SUPERFAMILY SSF161098 27 278 1.96E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00985 010534c149798cb326e57f9b6c2f3fc0 571 Gene3D G3DSA:1.10.3720.10 313 559 1.9E-37 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00985 010534c149798cb326e57f9b6c2f3fc0 571 Gene3D G3DSA:1.10.3720.10 27 276 2.7E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00985 010534c149798cb326e57f9b6c2f3fc0 571 SUPERFAMILY SSF161098 316 550 1.4E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00985 010534c149798cb326e57f9b6c2f3fc0 571 PANTHER PTHR30183 12 560 7.8E-58 T 22-04-2016 AMK43_RS01430 0a3f5d1a8a00158c99472b95b8011838 472 Gene3D G3DSA:3.40.50.2000 258 447 7.5E-15 T 22-04-2016 AMK43_RS01430 0a3f5d1a8a00158c99472b95b8011838 472 Pfam PF11997 Domain of unknown function (DUF3492) 4 264 1.3E-85 T 22-04-2016 IPR022622 Domain of unknown function DUF3492 AMK43_RS01430 0a3f5d1a8a00158c99472b95b8011838 472 SUPERFAMILY SSF53756 4 83 2.33E-62 T 22-04-2016 AMK43_RS01430 0a3f5d1a8a00158c99472b95b8011838 472 SUPERFAMILY SSF53756 169 469 2.33E-62 T 22-04-2016 AMK43_RS01430 0a3f5d1a8a00158c99472b95b8011838 472 Pfam PF00534 Glycosyl transferases group 1 289 448 7.4E-23 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 AMK43_RS01430 0a3f5d1a8a00158c99472b95b8011838 472 PANTHER PTHR12526 150 470 1.4E-49 T 22-04-2016 AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 Pfam PF13932 GidA associated domain 401 619 6.0E-63 T 22-04-2016 IPR026904 GidA associated domain 3 AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.4E-6 T 22-04-2016 AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 1.4E-6 T 22-04-2016 AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 2 628 40.345 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 PANTHER PTHR11806 2 623 0.0 T 22-04-2016 AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 PANTHER PTHR11806:SF0 2 623 0.0 T 22-04-2016 AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 4 624 1.1E-253 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 22-04-2016 IPR020595 MnmG-related, conserved site AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 Pfam PF01134 Glucose inhibited division protein A 5 399 3.1E-159 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 7.5E-7 T 22-04-2016 AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 148 157 7.5E-7 T 22-04-2016 AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 22-04-2016 IPR020595 MnmG-related, conserved site AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 SUPERFAMILY SSF51905 2 63 2.13E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 SUPERFAMILY SSF51905 94 260 2.13E-42 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 SMART SM01228 550 621 9.1E-35 T 22-04-2016 AMK43_RS10570 652c9731a00283ee36c590fb1959a1d7 628 Gene3D G3DSA:3.50.50.60 3 216 1.9E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS09720 0f3f82c8a01df36592c190fb1d5c8161 470 PRINTS PR00175 Sodium/alanine symporter signature 364 386 6.1E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMK43_RS09720 0f3f82c8a01df36592c190fb1d5c8161 470 PRINTS PR00175 Sodium/alanine symporter signature 314 332 6.1E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMK43_RS09720 0f3f82c8a01df36592c190fb1d5c8161 470 PRINTS PR00175 Sodium/alanine symporter signature 191 209 6.1E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMK43_RS09720 0f3f82c8a01df36592c190fb1d5c8161 470 PRINTS PR00175 Sodium/alanine symporter signature 219 238 6.1E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMK43_RS09720 0f3f82c8a01df36592c190fb1d5c8161 470 PRINTS PR00175 Sodium/alanine symporter signature 423 443 6.1E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMK43_RS09720 0f3f82c8a01df36592c190fb1d5c8161 470 PRINTS PR00175 Sodium/alanine symporter signature 93 115 6.1E-56 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMK43_RS09720 0f3f82c8a01df36592c190fb1d5c8161 470 PANTHER PTHR30330:SF4 1 459 1.0E-207 T 22-04-2016 AMK43_RS09720 0f3f82c8a01df36592c190fb1d5c8161 470 Pfam PF01235 Sodium:alanine symporter family 54 462 3.5E-145 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMK43_RS09720 0f3f82c8a01df36592c190fb1d5c8161 470 PANTHER PTHR30330 1 459 1.0E-207 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMK43_RS09720 0f3f82c8a01df36592c190fb1d5c8161 470 TIGRFAM TIGR00835 agcS: amino acid carrier protein 19 454 1.3E-142 T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMK43_RS09720 0f3f82c8a01df36592c190fb1d5c8161 470 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 93 108 - T 22-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 AMK43_RS01680 734ce090054d6143879333980a8ca8bc 440 PANTHER PTHR32092:SF7 3 440 1.2E-157 T 22-04-2016 AMK43_RS01680 734ce090054d6143879333980a8ca8bc 440 PANTHER PTHR32092 3 440 1.2E-157 T 22-04-2016 AMK43_RS01680 734ce090054d6143879333980a8ca8bc 440 SUPERFAMILY SSF56327 171 437 5.4E-63 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMK43_RS01680 734ce090054d6143879333980a8ca8bc 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 4.7E-39 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS01680 734ce090054d6143879333980a8ca8bc 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 4.7E-39 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS01680 734ce090054d6143879333980a8ca8bc 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 111 131 4.7E-39 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS01680 734ce090054d6143879333980a8ca8bc 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 76 92 4.7E-39 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS01680 734ce090054d6143879333980a8ca8bc 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 4.7E-39 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS01680 734ce090054d6143879333980a8ca8bc 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 140 157 4.7E-39 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS01680 734ce090054d6143879333980a8ca8bc 440 Gene3D G3DSA:3.90.110.10 170 438 7.4E-80 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMK43_RS01680 734ce090054d6143879333980a8ca8bc 440 SUPERFAMILY SSF51735 4 164 3.79E-47 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS01680 734ce090054d6143879333980a8ca8bc 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 187 9.8E-46 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS01680 734ce090054d6143879333980a8ca8bc 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 416 2.3E-41 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AMK43_RS01680 734ce090054d6143879333980a8ca8bc 440 Gene3D G3DSA:3.40.50.720 4 166 6.2E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS08815 3fcbc2a5d4973ee76d35dc21380fca65 73 Pfam PF02609 Exonuclease VII small subunit 8 58 7.4E-14 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMK43_RS08815 3fcbc2a5d4973ee76d35dc21380fca65 73 PANTHER PTHR34137 1 73 5.4E-13 T 22-04-2016 AMK43_RS08815 3fcbc2a5d4973ee76d35dc21380fca65 73 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 7 62 3.7E-16 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMK43_RS08815 3fcbc2a5d4973ee76d35dc21380fca65 73 SUPERFAMILY SSF116842 2 66 5.36E-14 T 22-04-2016 AMK43_RS08815 3fcbc2a5d4973ee76d35dc21380fca65 73 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 7 67 11.889 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMK43_RS08815 3fcbc2a5d4973ee76d35dc21380fca65 73 Gene3D G3DSA:1.10.287.1040 3 71 1.9E-15 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMK43_RS08815 3fcbc2a5d4973ee76d35dc21380fca65 73 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 5 44 1.0E-6 T 22-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 AMK43_RS00655 0f37eb58303839177cbdcbdab74fe0e8 762 Gene3D G3DSA:3.20.20.210 1 366 1.7E-123 T 22-04-2016 AMK43_RS00655 0f37eb58303839177cbdcbdab74fe0e8 762 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 433 756 5.4E-139 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 AMK43_RS00655 0f37eb58303839177cbdcbdab74fe0e8 762 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 1 761 32.964 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 AMK43_RS00655 0f37eb58303839177cbdcbdab74fe0e8 762 PANTHER PTHR30519 1 758 0.0 T 22-04-2016 AMK43_RS00655 0f37eb58303839177cbdcbdab74fe0e8 762 Gene3D G3DSA:3.20.20.210 395 758 1.9E-119 T 22-04-2016 AMK43_RS00655 0f37eb58303839177cbdcbdab74fe0e8 762 PANTHER PTHR30519:SF0 1 758 0.0 T 22-04-2016 AMK43_RS00655 0f37eb58303839177cbdcbdab74fe0e8 762 PIRSF PIRSF000382 1 762 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 AMK43_RS00655 0f37eb58303839177cbdcbdab74fe0e8 762 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 3 314 1.6E-112 T 22-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 AMK43_RS00655 0f37eb58303839177cbdcbdab74fe0e8 762 SUPERFAMILY SSF51726 398 758 3.79E-104 T 22-04-2016 AMK43_RS00655 0f37eb58303839177cbdcbdab74fe0e8 762 SUPERFAMILY SSF51726 1 363 2.22E-88 T 22-04-2016 AMK43_RS00655 0f37eb58303839177cbdcbdab74fe0e8 762 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 6 759 0.0 T 22-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 AMK43_RS06150 954b7371427ba7064f56b452df28d7da 346 SUPERFAMILY SSF52283 2 133 4.25E-36 T 22-04-2016 AMK43_RS06150 954b7371427ba7064f56b452df28d7da 346 SUPERFAMILY SSF51735 102 299 3.78E-58 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS06150 954b7371427ba7064f56b452df28d7da 346 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMK43_RS06150 954b7371427ba7064f56b452df28d7da 346 PANTHER PTHR10996 1 329 5.2E-159 T 22-04-2016 AMK43_RS06150 954b7371427ba7064f56b452df28d7da 346 PANTHER PTHR10996:SF161 1 329 5.2E-159 T 22-04-2016 AMK43_RS06150 954b7371427ba7064f56b452df28d7da 346 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMK43_RS06150 954b7371427ba7064f56b452df28d7da 346 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 298 1.3E-58 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMK43_RS06150 954b7371427ba7064f56b452df28d7da 346 Gene3D G3DSA:3.40.50.720 138 305 8.2E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS06150 954b7371427ba7064f56b452df28d7da 346 Gene3D G3DSA:3.40.50.720 1 137 4.6E-41 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS06150 954b7371427ba7064f56b452df28d7da 346 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 3 329 1.2E-28 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 Gene3D G3DSA:3.30.420.140 317 444 5.6E-47 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 PANTHER PTHR10724:SF1 2 719 0.0 T 22-04-2016 AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 Gene3D G3DSA:1.10.150.310 493 629 7.0E-43 T 22-04-2016 IPR023097 Tex RuvX-like domain AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 Gene3D G3DSA:2.40.50.140 634 719 2.6E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 SUPERFAMILY SSF50249 634 719 6.65E-26 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 SUPERFAMILY SSF47781 464 552 4.67E-26 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 SMART SM00732 317 418 2.4E-25 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 Gene3D G3DSA:1.10.10.650 3 107 3.7E-43 T 22-04-2016 IPR023319 Tex-like protein, HTH domain AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 Pfam PF16921 Tex protein YqgF-like domain 317 445 1.4E-51 T 22-04-2016 IPR032639 Tex protein, YqgF-like domain AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 SUPERFAMILY SSF47781 554 631 1.01E-15 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 SUPERFAMILY SSF158832 2 312 2.35E-103 T 22-04-2016 AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 Gene3D G3DSA:1.10.3500.10 108 313 2.4E-84 T 22-04-2016 IPR023323 Tex-like domain AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 Gene3D G3DSA:1.10.3500.10 445 492 2.4E-84 T 22-04-2016 IPR023323 Tex-like domain AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 Pfam PF09371 Tex-like protein N-terminal domain 7 191 2.7E-65 T 22-04-2016 IPR018974 Tex-like protein, N-terminal AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 SUPERFAMILY SSF53098 313 463 1.44E-44 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 Pfam PF00575 S1 RNA binding domain 647 719 9.9E-20 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 SMART SM00316 648 719 3.8E-25 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 PANTHER PTHR10724 2 719 0.0 T 22-04-2016 AMK43_RS01195 cb2c6be56a7aa085a75c708ee4fafe1b 721 Pfam PF12836 Helix-hairpin-helix motif 485 548 2.0E-26 T 22-04-2016 AMK43_RS10525 ba8a95dbcc82b1b8069f74a92147496f 308 Gene3D G3DSA:3.30.1490.20 111 178 2.8E-19 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK43_RS10525 ba8a95dbcc82b1b8069f74a92147496f 308 SUPERFAMILY SSF56059 100 301 1.84E-44 T 22-04-2016 AMK43_RS10525 ba8a95dbcc82b1b8069f74a92147496f 308 SUPERFAMILY SSF52440 5 99 4.03E-26 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK43_RS10525 ba8a95dbcc82b1b8069f74a92147496f 308 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 5 304 32.816 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10525 ba8a95dbcc82b1b8069f74a92147496f 308 Pfam PF01820 D-ala D-ala ligase N-terminus 6 89 1.0E-21 T 22-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10525 ba8a95dbcc82b1b8069f74a92147496f 308 PIRSF PIRSF039102 45 308 4.5E-80 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10525 ba8a95dbcc82b1b8069f74a92147496f 308 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 247 274 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10525 ba8a95dbcc82b1b8069f74a92147496f 308 Gene3D G3DSA:3.40.50.20 5 87 1.7E-23 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK43_RS10525 ba8a95dbcc82b1b8069f74a92147496f 308 Pfam PF07478 D-ala D-ala ligase C-terminus 110 301 1.7E-43 T 22-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10525 ba8a95dbcc82b1b8069f74a92147496f 308 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 67 78 - T 22-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10525 ba8a95dbcc82b1b8069f74a92147496f 308 PANTHER PTHR23132 1 304 2.6E-73 T 22-04-2016 AMK43_RS10525 ba8a95dbcc82b1b8069f74a92147496f 308 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 301 6.3E-79 T 22-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10525 ba8a95dbcc82b1b8069f74a92147496f 308 Gene3D G3DSA:3.30.470.20 89 107 1.2E-36 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK43_RS10525 ba8a95dbcc82b1b8069f74a92147496f 308 Gene3D G3DSA:3.30.470.20 179 302 1.2E-36 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK43_RS06935 91dab6387c02b2764285a12e71efb497 228 Gene3D G3DSA:2.10.109.10 97 228 2.3E-6 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMK43_RS06935 91dab6387c02b2764285a12e71efb497 228 SMART SM00530 6 61 2.4E-8 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK43_RS06935 91dab6387c02b2764285a12e71efb497 228 Pfam PF01381 Helix-turn-helix 12 59 7.0E-9 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK43_RS06935 91dab6387c02b2764285a12e71efb497 228 SUPERFAMILY SSF47413 5 80 1.18E-9 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS06935 91dab6387c02b2764285a12e71efb497 228 Gene3D G3DSA:1.10.260.40 4 78 7.3E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS06935 91dab6387c02b2764285a12e71efb497 228 SUPERFAMILY SSF51306 97 223 2.33E-7 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMK43_RS00295 2b6e77972adf3077931dcff15fa8edb6 349 Gene3D G3DSA:3.40.50.2000 1 197 1.2E-57 T 22-04-2016 AMK43_RS00295 2b6e77972adf3077931dcff15fa8edb6 349 SUPERFAMILY SSF53756 2 346 6.04E-87 T 22-04-2016 AMK43_RS00295 2b6e77972adf3077931dcff15fa8edb6 349 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 136 3.2E-31 T 22-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS00295 2b6e77972adf3077931dcff15fa8edb6 349 PANTHER PTHR21015:SF22 1 347 2.4E-90 T 22-04-2016 AMK43_RS00295 2b6e77972adf3077931dcff15fa8edb6 349 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 345 8.7E-85 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS00295 2b6e77972adf3077931dcff15fa8edb6 349 PANTHER PTHR21015 1 347 2.4E-90 T 22-04-2016 AMK43_RS00295 2b6e77972adf3077931dcff15fa8edb6 349 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 332 1.2E-27 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS00295 2b6e77972adf3077931dcff15fa8edb6 349 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 348 27.447 T 22-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS05150 ba47fa6b1b18a760d06a6a17f6c2fb54 695 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 143 630 2.1E-208 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AMK43_RS05150 ba47fa6b1b18a760d06a6a17f6c2fb54 695 Gene3D G3DSA:1.10.8.60 376 441 8.3E-29 T 22-04-2016 AMK43_RS05150 ba47fa6b1b18a760d06a6a17f6c2fb54 695 Pfam PF06480 FtsH Extracellular 41 133 4.0E-7 T 22-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 AMK43_RS05150 ba47fa6b1b18a760d06a6a17f6c2fb54 695 SUPERFAMILY SSF140990 448 635 4.05E-63 T 22-04-2016 AMK43_RS05150 ba47fa6b1b18a760d06a6a17f6c2fb54 695 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 37 648 35.337 T 22-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 AMK43_RS05150 ba47fa6b1b18a760d06a6a17f6c2fb54 695 ProSitePatterns PS00674 AAA-protein family signature. 337 355 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMK43_RS05150 ba47fa6b1b18a760d06a6a17f6c2fb54 695 SMART SM00382 229 369 5.3E-25 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS05150 ba47fa6b1b18a760d06a6a17f6c2fb54 695 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 233 366 4.3E-46 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK43_RS05150 ba47fa6b1b18a760d06a6a17f6c2fb54 695 Pfam PF01434 Peptidase family M41 428 629 1.2E-67 T 22-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 AMK43_RS05150 ba47fa6b1b18a760d06a6a17f6c2fb54 695 SUPERFAMILY SSF52540 189 437 8.85E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05150 ba47fa6b1b18a760d06a6a17f6c2fb54 695 PANTHER PTHR23076:SF10 1 695 4.4E-276 T 22-04-2016 AMK43_RS05150 ba47fa6b1b18a760d06a6a17f6c2fb54 695 PANTHER PTHR23076 1 695 4.4E-276 T 22-04-2016 AMK43_RS05150 ba47fa6b1b18a760d06a6a17f6c2fb54 695 Gene3D G3DSA:3.40.50.300 189 375 2.1E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08175 8f9f490113de8b923fbbcfd9ed05791b 610 PANTHER PTHR11804 130 608 1.3E-91 T 22-04-2016 AMK43_RS08175 8f9f490113de8b923fbbcfd9ed05791b 610 PANTHER PTHR11804:SF8 130 608 1.3E-91 T 22-04-2016 AMK43_RS08175 8f9f490113de8b923fbbcfd9ed05791b 610 Pfam PF01432 Peptidase family M3 204 586 1.6E-60 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 AMK43_RS08175 8f9f490113de8b923fbbcfd9ed05791b 610 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 10 599 3.4E-180 T 22-04-2016 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 AMK43_RS08175 8f9f490113de8b923fbbcfd9ed05791b 610 SUPERFAMILY SSF55486 10 581 1.41E-94 T 22-04-2016 AMK43_RS08175 8f9f490113de8b923fbbcfd9ed05791b 610 Pfam PF08439 Oligopeptidase F 121 180 5.9E-12 T 22-04-2016 IPR013647 Oligopeptidase F, N-terminal domain AMK43_RS08175 8f9f490113de8b923fbbcfd9ed05791b 610 Gene3D G3DSA:3.40.390.10 341 424 1.1E-7 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMK43_RS11410 504746dbeee9ed6483a3e1f2dfd907f6 630 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 630 35.129 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AMK43_RS11410 504746dbeee9ed6483a3e1f2dfd907f6 630 PANTHER PTHR11806 1 630 1.7E-271 T 22-04-2016 AMK43_RS11410 504746dbeee9ed6483a3e1f2dfd907f6 630 PANTHER PTHR11806:SF0 1 630 1.7E-271 T 22-04-2016 AMK43_RS11410 504746dbeee9ed6483a3e1f2dfd907f6 630 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 270 284 - T 22-04-2016 IPR020595 MnmG-related, conserved site AMK43_RS11410 504746dbeee9ed6483a3e1f2dfd907f6 630 Pfam PF13932 GidA associated domain 399 623 1.3E-57 T 22-04-2016 IPR026904 GidA associated domain 3 AMK43_RS11410 504746dbeee9ed6483a3e1f2dfd907f6 630 Pfam PF01134 Glucose inhibited division protein A 6 396 4.2E-140 T 22-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 AMK43_RS11410 504746dbeee9ed6483a3e1f2dfd907f6 630 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 628 1.3E-219 T 22-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 AMK43_RS11410 504746dbeee9ed6483a3e1f2dfd907f6 630 SUPERFAMILY SSF51905 4 64 2.25E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS11410 504746dbeee9ed6483a3e1f2dfd907f6 630 SUPERFAMILY SSF51905 95 246 2.25E-33 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS11410 504746dbeee9ed6483a3e1f2dfd907f6 630 Gene3D G3DSA:3.50.50.60 5 216 5.4E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS11410 504746dbeee9ed6483a3e1f2dfd907f6 630 SMART SM01228 554 625 5.3E-31 T 22-04-2016 AMK43_RS05630 b826782863185bd5a6aeb559016386da 363 PANTHER PTHR30574:SF1 1 314 2.2E-16 T 22-04-2016 AMK43_RS05630 b826782863185bd5a6aeb559016386da 363 PANTHER PTHR30574 1 314 2.2E-16 T 22-04-2016 AMK43_RS05630 b826782863185bd5a6aeb559016386da 363 TIGRFAM TIGR04112 seleno_YedE: putative selenium metabolism protein, YedE family 11 355 8.8E-138 T 22-04-2016 IPR026366 Putative selenium metabolism protein, YedE family AMK43_RS05630 b826782863185bd5a6aeb559016386da 363 Pfam PF04143 Sulphur transport 208 353 4.5E-12 T 22-04-2016 IPR007272 Sulphur transport domain AMK43_RS03445 c598cc437b5b6de737c5a9f1e4b10e07 405 PANTHER PTHR10617 339 405 3.7E-89 T 22-04-2016 AMK43_RS03445 c598cc437b5b6de737c5a9f1e4b10e07 405 PANTHER PTHR10617 1 297 3.7E-89 T 22-04-2016 AMK43_RS03445 c598cc437b5b6de737c5a9f1e4b10e07 405 Gene3D G3DSA:2.40.30.10 190 279 1.3E-12 T 22-04-2016 AMK43_RS03445 c598cc437b5b6de737c5a9f1e4b10e07 405 Pfam PF03486 HI0933-like protein 4 401 2.9E-122 T 22-04-2016 AMK43_RS03445 c598cc437b5b6de737c5a9f1e4b10e07 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 3.5E-6 T 22-04-2016 AMK43_RS03445 c598cc437b5b6de737c5a9f1e4b10e07 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 3.5E-6 T 22-04-2016 AMK43_RS03445 c598cc437b5b6de737c5a9f1e4b10e07 405 SUPERFAMILY SSF51905 1 189 1.41E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS03445 c598cc437b5b6de737c5a9f1e4b10e07 405 SUPERFAMILY SSF51905 346 404 1.41E-51 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS03445 c598cc437b5b6de737c5a9f1e4b10e07 405 PANTHER PTHR10617:SF103 339 405 3.7E-89 T 22-04-2016 AMK43_RS03445 c598cc437b5b6de737c5a9f1e4b10e07 405 PANTHER PTHR10617:SF103 1 297 3.7E-89 T 22-04-2016 AMK43_RS03445 c598cc437b5b6de737c5a9f1e4b10e07 405 SUPERFAMILY SSF160996 190 349 8.89E-36 T 22-04-2016 AMK43_RS03445 c598cc437b5b6de737c5a9f1e4b10e07 405 Gene3D G3DSA:3.50.50.60 348 404 1.5E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS03445 c598cc437b5b6de737c5a9f1e4b10e07 405 Gene3D G3DSA:3.50.50.60 2 187 1.5E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS03445 c598cc437b5b6de737c5a9f1e4b10e07 405 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 5 401 3.6E-133 T 22-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like AMK43_RS07125 9cb3273110fbbb7dd7ef5a38e6bd7e2f 189 SUPERFAMILY SSF48498 77 170 8.45E-6 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK43_RS07125 9cb3273110fbbb7dd7ef5a38e6bd7e2f 189 Pfam PF13305 WHG domain 83 157 6.8E-8 T 22-04-2016 IPR025996 WHG domain AMK43_RS07125 9cb3273110fbbb7dd7ef5a38e6bd7e2f 189 Gene3D G3DSA:1.10.357.10 59 170 3.5E-5 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK43_RS07125 9cb3273110fbbb7dd7ef5a38e6bd7e2f 189 Gene3D G3DSA:1.10.10.60 5 58 1.5E-8 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS07125 9cb3273110fbbb7dd7ef5a38e6bd7e2f 189 SUPERFAMILY SSF46689 2 69 7.7E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 SUPERFAMILY SSF53748 3 399 3.18E-157 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 399 41.84 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 PIRSF PIRSF000724 1 403 2.6E-144 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 PANTHER PTHR11406 1 397 6.6E-221 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 Gene3D G3DSA:3.40.50.1270 185 387 2.1E-87 T 22-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 Pfam PF00162 Phosphoglycerate kinase 6 389 3.2E-159 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 Gene3D G3DSA:3.40.50.1260 3 184 1.3E-70 T 22-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 22-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.0E-95 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 PRINTS PR00477 Phosphoglycerate kinase family signature 142 164 2.0E-95 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 PRINTS PR00477 Phosphoglycerate kinase family signature 196 215 2.0E-95 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 2.0E-95 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.0E-95 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 PRINTS PR00477 Phosphoglycerate kinase family signature 318 343 2.0E-95 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 PRINTS PR00477 Phosphoglycerate kinase family signature 352 363 2.0E-95 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 PRINTS PR00477 Phosphoglycerate kinase family signature 375 392 2.0E-95 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS10655 217a367c2d6dbf5e5b1f5b6947536744 408 PRINTS PR00477 Phosphoglycerate kinase family signature 173 195 2.0E-95 T 22-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 153 173 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 26 45 2.9E-33 T 22-04-2016 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 249 265 2.9E-33 T 22-04-2016 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 298 2.9E-33 T 22-04-2016 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 165 183 2.9E-33 T 22-04-2016 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 123 141 2.9E-33 T 22-04-2016 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 SUPERFAMILY SSF51905 19 323 4.86E-43 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 24 311 1.2E-46 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 Gene3D G3DSA:3.50.50.60 21 130 2.8E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PANTHER PTHR22912 10 322 4.4E-125 T 22-04-2016 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PANTHER PTHR22912:SF107 10 322 4.4E-125 T 22-04-2016 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 229 1.4E-61 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 77 87 1.4E-61 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 124 132 1.4E-61 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 158 1.4E-61 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 251 272 1.4E-61 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 161 185 1.4E-61 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 57 72 1.4E-61 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 286 304 1.4E-61 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 25 47 1.4E-61 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS07345 3fb7d2bd26b4df1fba1730dfff09d688 327 Gene3D G3DSA:3.50.50.60 131 320 3.2E-39 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS00270 9e14ca6b5aacea540bd55b22d83b5d6f 190 PANTHER PTHR23133:SF3 4 186 2.0E-43 T 22-04-2016 AMK43_RS00270 9e14ca6b5aacea540bd55b22d83b5d6f 190 SUPERFAMILY SSF56784 3 185 6.54E-43 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS00270 9e14ca6b5aacea540bd55b22d83b5d6f 190 PANTHER PTHR23133 4 186 2.0E-43 T 22-04-2016 AMK43_RS00270 9e14ca6b5aacea540bd55b22d83b5d6f 190 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 5 173 1.6E-54 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AMK43_RS00270 9e14ca6b5aacea540bd55b22d83b5d6f 190 Gene3D G3DSA:3.40.50.1000 2 184 1.6E-54 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS00270 9e14ca6b5aacea540bd55b22d83b5d6f 190 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 7 153 1.6E-38 T 22-04-2016 IPR006543 Histidinol-phosphate phosphatase GO:0016791 AMK43_RS00270 9e14ca6b5aacea540bd55b22d83b5d6f 190 Pfam PF13242 HAD-hyrolase-like 107 159 4.5E-12 T 22-04-2016 AMK43_RS00270 9e14ca6b5aacea540bd55b22d83b5d6f 190 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 154 7.4E-32 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AMK43_RS00270 9e14ca6b5aacea540bd55b22d83b5d6f 190 PIRSF PIRSF004682 1 178 2.6E-56 T 22-04-2016 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 Pfam PF03129 Anticodon binding domain 538 628 3.3E-20 T 22-04-2016 IPR004154 Anticodon-binding AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 Pfam PF02824 TGS domain 4 61 2.0E-10 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 Gene3D G3DSA:3.30.930.10 240 527 3.3E-123 T 22-04-2016 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 168 217 1.1E-17 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 Gene3D G3DSA:3.30.980.10 66 129 7.0E-44 T 22-04-2016 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 Gene3D G3DSA:3.30.980.10 186 222 7.0E-44 T 22-04-2016 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 Gene3D G3DSA:3.30.54.20 130 185 5.8E-21 T 22-04-2016 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 632 33.702 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 Gene3D G3DSA:3.40.50.800 528 630 1.1E-31 T 22-04-2016 IPR004154 Anticodon-binding AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 SUPERFAMILY SSF55186 64 239 4.19E-69 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 SUPERFAMILY SSF55681 241 523 1.53E-96 T 22-04-2016 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 321 526 1.0E-40 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 SUPERFAMILY SSF52954 526 629 4.08E-29 T 22-04-2016 IPR004154 Anticodon-binding AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 SUPERFAMILY SSF81271 4 61 5.67E-13 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 PANTHER PTHR11451:SF31 1 629 0.0 T 22-04-2016 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 504 517 5.8E-51 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 461 489 5.8E-51 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 531 543 5.8E-51 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 327 355 5.8E-51 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 PRINTS PR01047 Threonyl-tRNA synthetase signature 360 383 5.8E-51 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 Gene3D G3DSA:3.10.20.30 1 63 1.5E-17 T 22-04-2016 IPR012675 Beta-grasp domain AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 PANTHER PTHR11451 1 629 0.0 T 22-04-2016 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 627 7.4E-221 T 22-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 AMK43_RS10175 4d527ab1395577b29913d89ee73bb0b7 636 SMART SM00863 168 217 2.0E-26 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK43_RS00610 bc6fc0ce2b1601289d607936181aa2ca 477 SUPERFAMILY SSF55931 6 297 1.37E-114 T 22-04-2016 AMK43_RS00610 bc6fc0ce2b1601289d607936181aa2ca 477 Pfam PF02934 GatB/GatE catalytic domain 7 289 1.3E-110 T 22-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 AMK43_RS00610 bc6fc0ce2b1601289d607936181aa2ca 477 SMART SM00845 329 476 3.5E-68 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 AMK43_RS00610 bc6fc0ce2b1601289d607936181aa2ca 477 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 4 477 37.227 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AMK43_RS00610 bc6fc0ce2b1601289d607936181aa2ca 477 PANTHER PTHR11659:SF0 4 477 6.3E-229 T 22-04-2016 AMK43_RS00610 bc6fc0ce2b1601289d607936181aa2ca 477 SUPERFAMILY SSF89095 298 404 1.31E-28 T 22-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 AMK43_RS00610 bc6fc0ce2b1601289d607936181aa2ca 477 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 3 476 1.4E-174 T 22-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 AMK43_RS00610 bc6fc0ce2b1601289d607936181aa2ca 477 PANTHER PTHR11659 4 477 6.3E-229 T 22-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 AMK43_RS00610 bc6fc0ce2b1601289d607936181aa2ca 477 Pfam PF02637 GatB domain 329 476 7.4E-51 T 22-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 AMK43_RS00610 bc6fc0ce2b1601289d607936181aa2ca 477 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 145 159 - T 22-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 AMK43_RS02275 7b34e17ada59b01a09dced91a0959c8a 408 PANTHER PTHR30006:SF10 40 408 7.9E-31 T 22-04-2016 AMK43_RS02275 7b34e17ada59b01a09dced91a0959c8a 408 Gene3D G3DSA:3.40.190.10 109 205 1.7E-10 T 22-04-2016 AMK43_RS02275 7b34e17ada59b01a09dced91a0959c8a 408 Gene3D G3DSA:3.40.190.10 338 382 1.7E-10 T 22-04-2016 AMK43_RS02275 7b34e17ada59b01a09dced91a0959c8a 408 Gene3D G3DSA:3.40.190.10 209 337 2.9E-14 T 22-04-2016 AMK43_RS02275 7b34e17ada59b01a09dced91a0959c8a 408 PANTHER PTHR30006 40 408 7.9E-31 T 22-04-2016 AMK43_RS02275 7b34e17ada59b01a09dced91a0959c8a 408 SUPERFAMILY SSF140683 1 72 3.92E-14 T 22-04-2016 AMK43_RS02275 7b34e17ada59b01a09dced91a0959c8a 408 Gene3D G3DSA:1.10.3910.10 1 69 3.9E-17 T 22-04-2016 IPR015077 Domain of unknown function DUF1858 AMK43_RS02275 7b34e17ada59b01a09dced91a0959c8a 408 SUPERFAMILY SSF53850 109 406 1.09E-24 T 22-04-2016 AMK43_RS02275 7b34e17ada59b01a09dced91a0959c8a 408 Pfam PF13343 Bacterial extracellular solute-binding protein 149 388 9.0E-75 T 22-04-2016 AMK43_RS02275 7b34e17ada59b01a09dced91a0959c8a 408 Pfam PF08984 Domain of unknown function (DUF1858) 7 61 1.7E-10 T 22-04-2016 IPR015077 Domain of unknown function DUF1858 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 319 46.105 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 PIRSF PIRSF000532 1 319 1.8E-124 T 22-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 6.7E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 6.7E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 6.7E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 6.7E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 6.7E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 6.7E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 6.7E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 6.7E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 6.7E-83 T 22-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 PANTHER PTHR13697 1 303 3.5E-139 T 22-04-2016 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 298 5.8E-130 T 22-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 SUPERFAMILY SSF53784 1 314 6.41E-114 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 Pfam PF00365 Phosphofructokinase 3 276 4.5E-109 T 22-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 22-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 PANTHER PTHR13697:SF4 1 303 3.5E-139 T 22-04-2016 AMK43_RS06685 d250631118eb5b689e041ee32db13efb 320 Gene3D G3DSA:3.40.50.450 1 212 1.2E-71 T 22-04-2016 AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 SMART SM00487 233 428 1.5E-8 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 SMART SM00490 702 804 3.4E-13 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 PANTHER PTHR10799 224 423 8.1E-66 T 22-04-2016 AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 PANTHER PTHR10799 460 482 8.1E-66 T 22-04-2016 AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 PANTHER PTHR10799 759 834 8.1E-66 T 22-04-2016 AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 PANTHER PTHR10799 647 738 8.1E-66 T 22-04-2016 AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 PANTHER PTHR10799 526 610 8.1E-66 T 22-04-2016 AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 SUPERFAMILY SSF52540 341 413 5.56E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 SUPERFAMILY SSF52540 656 838 5.56E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 Gene3D G3DSA:3.40.50.300 231 409 2.1E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 SUPERFAMILY SSF52540 198 414 5.22E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 PANTHER PTHR10799:SF712 224 423 8.1E-66 T 22-04-2016 AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 PANTHER PTHR10799:SF712 460 482 8.1E-66 T 22-04-2016 AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 PANTHER PTHR10799:SF712 759 834 8.1E-66 T 22-04-2016 AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 PANTHER PTHR10799:SF712 647 738 8.1E-66 T 22-04-2016 AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 PANTHER PTHR10799:SF712 526 610 8.1E-66 T 22-04-2016 AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 Pfam PF00176 SNF2 family N-terminal domain 243 405 7.0E-10 T 22-04-2016 IPR000330 SNF2-related, N-terminal domain GO:0005524 AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 Pfam PF00271 Helicase conserved C-terminal domain 684 804 3.6E-16 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS06900 976f474740f2a6e1476bcd3dee8209ba 1050 Gene3D G3DSA:3.40.50.300 660 835 1.2E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 SUPERFAMILY SSF81296 89 199 1.06E-9 T 22-04-2016 IPR014756 Immunoglobulin E-set AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 Gene3D G3DSA:2.60.40.1180 781 847 7.1E-7 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 PANTHER PTHR10357:SF10 395 734 1.0E-40 T 22-04-2016 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 PANTHER PTHR10357:SF10 287 340 1.0E-40 T 22-04-2016 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 PANTHER PTHR10357:SF10 765 836 1.0E-40 T 22-04-2016 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 PANTHER PTHR10357:SF10 179 219 1.0E-40 T 22-04-2016 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 Gene3D G3DSA:2.60.40.10 84 196 2.1E-9 T 22-04-2016 IPR013783 Immunoglobulin-like fold AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 Pfam PF00128 Alpha amylase, catalytic domain 290 340 5.8E-12 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 Pfam PF00128 Alpha amylase, catalytic domain 473 653 1.6E-12 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 SUPERFAMILY SSF51445 622 669 1.82E-44 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 SUPERFAMILY SSF51445 395 595 1.82E-44 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 SUPERFAMILY SSF51445 276 340 1.82E-44 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 SUPERFAMILY SSF51445 194 247 1.82E-44 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 SUPERFAMILY SSF51445 709 728 1.82E-44 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 SUPERFAMILY SSF51011 777 847 7.2E-6 T 22-04-2016 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 PANTHER PTHR10357 395 734 1.0E-40 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 PANTHER PTHR10357 287 340 1.0E-40 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 PANTHER PTHR10357 765 836 1.0E-40 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 PANTHER PTHR10357 179 219 1.0E-40 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 Gene3D G3DSA:3.20.20.80 262 341 9.8E-60 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 Gene3D G3DSA:3.20.20.80 396 665 9.8E-60 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 Gene3D G3DSA:3.20.20.80 705 723 9.8E-60 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 Gene3D G3DSA:3.20.20.80 197 225 9.8E-60 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS04575 2f6a42eb4df40c7da35ff771debea147 859 SMART SM00642 205 685 3.8E-8 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK43_RS07275 fa1b61c64fb1ae2d2bb0e2f259b6f666 321 PANTHER PTHR33295 1 321 5.0E-121 T 22-04-2016 AMK43_RS07275 fa1b61c64fb1ae2d2bb0e2f259b6f666 321 Pfam PF13635 Domain of unknown function (DUF4143) 117 264 1.2E-8 T 22-04-2016 IPR025420 Domain of unknown function DUF4143 AMK43_RS07275 fa1b61c64fb1ae2d2bb0e2f259b6f666 321 Pfam PF13173 AAA domain 1 64 4.8E-19 T 22-04-2016 AMK43_RS07275 fa1b61c64fb1ae2d2bb0e2f259b6f666 321 PANTHER PTHR33295:SF8 1 321 5.0E-121 T 22-04-2016 AMK43_RS07275 fa1b61c64fb1ae2d2bb0e2f259b6f666 321 SUPERFAMILY SSF52540 1 120 1.86E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05010 6525355d3c4e72a906eb4e43766077b9 208 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 14 175 1.3E-39 T 22-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS05010 6525355d3c4e72a906eb4e43766077b9 208 Pfam PF00156 Phosphoribosyl transferase domain 59 176 2.3E-17 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK43_RS05010 6525355d3c4e72a906eb4e43766077b9 208 Gene3D G3DSA:3.40.50.2020 7 207 2.1E-49 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS05010 6525355d3c4e72a906eb4e43766077b9 208 SUPERFAMILY SSF53271 13 207 4.63E-44 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS05010 6525355d3c4e72a906eb4e43766077b9 208 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 208 24.474 T 22-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS05010 6525355d3c4e72a906eb4e43766077b9 208 PANTHER PTHR19278 7 207 1.3E-45 T 22-04-2016 AMK43_RS03665 30c803c715c4ed937e8abc5398d094e2 297 PANTHER PTHR30595:SF5 1 270 1.1E-45 T 22-04-2016 AMK43_RS03665 30c803c715c4ed937e8abc5398d094e2 297 SUPERFAMILY SSF46785 4 59 1.47E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03665 30c803c715c4ed937e8abc5398d094e2 297 PIRSF PIRSF016838 1 296 3.2E-26 T 22-04-2016 IPR028349 Protein PafC AMK43_RS03665 30c803c715c4ed937e8abc5398d094e2 297 Gene3D G3DSA:1.10.10.10 2 63 1.5E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03665 30c803c715c4ed937e8abc5398d094e2 297 PANTHER PTHR30595 1 270 1.1E-45 T 22-04-2016 AMK43_RS03665 30c803c715c4ed937e8abc5398d094e2 297 Pfam PF08279 HTH domain 5 59 2.0E-15 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 AMK43_RS03665 30c803c715c4ed937e8abc5398d094e2 297 Pfam PF13280 WYL domain 129 292 1.2E-32 T 22-04-2016 IPR026881 WYL domain AMK43_RS04350 ce49be05c99a41d3dfdf4f76e4087c5e 231 PANTHER PTHR23416:SF50 38 231 4.1E-50 T 22-04-2016 AMK43_RS04350 ce49be05c99a41d3dfdf4f76e4087c5e 231 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 8 231 3.1E-103 T 22-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 AMK43_RS04350 ce49be05c99a41d3dfdf4f76e4087c5e 231 Gene3D G3DSA:2.160.10.10 85 222 9.2E-49 T 22-04-2016 AMK43_RS04350 ce49be05c99a41d3dfdf4f76e4087c5e 231 Gene3D G3DSA:3.30.70.250 4 82 2.6E-23 T 22-04-2016 AMK43_RS04350 ce49be05c99a41d3dfdf4f76e4087c5e 231 PANTHER PTHR23416 38 231 4.1E-50 T 22-04-2016 AMK43_RS04350 ce49be05c99a41d3dfdf4f76e4087c5e 231 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 170 198 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK43_RS04350 ce49be05c99a41d3dfdf4f76e4087c5e 231 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 161 196 1.2E-10 T 22-04-2016 IPR001451 Hexapeptide repeat AMK43_RS04350 ce49be05c99a41d3dfdf4f76e4087c5e 231 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 115 7.4E-4 T 22-04-2016 IPR001451 Hexapeptide repeat AMK43_RS04350 ce49be05c99a41d3dfdf4f76e4087c5e 231 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 3.8E-10 T 22-04-2016 IPR001451 Hexapeptide repeat AMK43_RS04350 ce49be05c99a41d3dfdf4f76e4087c5e 231 SUPERFAMILY SSF51161 82 222 8.32E-50 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK43_RS04350 ce49be05c99a41d3dfdf4f76e4087c5e 231 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 2 231 42.057 T 22-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 AMK43_RS04350 ce49be05c99a41d3dfdf4f76e4087c5e 231 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 7 83 2.0E-23 T 22-04-2016 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 AMK43_RS07670 fcb804447020c9c7f4686d789744484b 332 SUPERFAMILY SSF55347 129 314 1.09E-71 T 22-04-2016 AMK43_RS07670 fcb804447020c9c7f4686d789744484b 332 PANTHER PTHR10174 67 329 1.7E-73 T 22-04-2016 AMK43_RS07670 fcb804447020c9c7f4686d789744484b 332 SMART SM00859 5 121 1.9E-43 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMK43_RS07670 fcb804447020c9c7f4686d789744484b 332 PANTHER PTHR10174:SF2 67 329 1.7E-73 T 22-04-2016 AMK43_RS07670 fcb804447020c9c7f4686d789744484b 332 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 139 313 3.0E-49 T 22-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 AMK43_RS07670 fcb804447020c9c7f4686d789744484b 332 SUPERFAMILY SSF51735 3 156 2.61E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS07670 fcb804447020c9c7f4686d789744484b 332 Gene3D G3DSA:3.40.50.720 1 141 2.9E-62 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS07670 fcb804447020c9c7f4686d789744484b 332 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 5 328 2.0E-141 T 22-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK43_RS07670 fcb804447020c9c7f4686d789744484b 332 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 327 37.618 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK43_RS07670 fcb804447020c9c7f4686d789744484b 332 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 119 2.5E-35 T 22-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 AMK43_RS07670 fcb804447020c9c7f4686d789744484b 332 PIRSF PIRSF000148 3 332 1.1E-126 T 22-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK43_RS07670 fcb804447020c9c7f4686d789744484b 332 Gene3D G3DSA:3.30.360.10 142 309 1.8E-74 T 22-04-2016 AMK43_RS07140 8fa41ccb468c2c10c307a7c1365da5c4 155 Pfam PF00588 SpoU rRNA Methylase family 2 144 3.2E-30 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMK43_RS07140 8fa41ccb468c2c10c307a7c1365da5c4 155 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 1 153 32.694 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AMK43_RS07140 8fa41ccb468c2c10c307a7c1365da5c4 155 SUPERFAMILY SSF75217 2 151 6.15E-37 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases AMK43_RS07140 8fa41ccb468c2c10c307a7c1365da5c4 155 PANTHER PTHR12029 1 152 3.8E-63 T 22-04-2016 AMK43_RS07140 8fa41ccb468c2c10c307a7c1365da5c4 155 PIRSF PIRSF029256 1 154 8.2E-61 T 22-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 AMK43_RS07140 8fa41ccb468c2c10c307a7c1365da5c4 155 Gene3D G3DSA:3.40.1280.10 1 152 1.0E-56 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK43_RS07140 8fa41ccb468c2c10c307a7c1365da5c4 155 PANTHER PTHR12029:SF31 1 152 3.8E-63 T 22-04-2016 AMK43_RS03270 98357940989cc61d23f452323affddae 59 SUPERFAMILY SSF63562 6 57 6.98E-8 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS03270 98357940989cc61d23f452323affddae 59 Gene3D G3DSA:3.90.940.10 6 49 6.8E-6 T 22-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS03270 98357940989cc61d23f452323affddae 59 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 5 38 6.4E-7 T 22-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS03270 98357940989cc61d23f452323affddae 59 Pfam PF01192 RNA polymerase Rpb6 10 30 2.1E-5 T 22-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS07105 8e72881fa076bb69adf635e41c104b0b 173 PANTHER PTHR10681:SF68 1 144 3.9E-14 T 22-04-2016 AMK43_RS07105 8e72881fa076bb69adf635e41c104b0b 173 Pfam PF08534 Redoxin 38 140 7.1E-17 T 22-04-2016 IPR013740 Redoxin GO:0016491 AMK43_RS07105 8e72881fa076bb69adf635e41c104b0b 173 PANTHER PTHR10681 1 144 3.9E-14 T 22-04-2016 AMK43_RS07105 8e72881fa076bb69adf635e41c104b0b 173 SUPERFAMILY SSF52833 38 169 5.13E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS07105 8e72881fa076bb69adf635e41c104b0b 173 Gene3D G3DSA:3.40.30.10 3 155 1.7E-31 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 Gene3D G3DSA:3.30.1330.20 222 340 1.5E-38 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 18 309 7.5E-111 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 SUPERFAMILY SSF55307 212 340 9.16E-33 T 22-04-2016 IPR008280 Tubulin/FtsZ, C-terminal AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 SUPERFAMILY SSF52490 23 215 7.33E-62 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 SMART SM00864 24 212 1.7E-96 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 Gene3D G3DSA:3.40.50.1440 24 221 6.0E-86 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 ProSitePatterns PS01135 FtsZ protein signature 2. 104 125 - T 22-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 SMART SM00865 214 345 1.4E-40 T 22-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 20 367 35.073 T 22-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 Pfam PF12327 FtsZ family, C-terminal domain 229 311 1.6E-24 T 22-04-2016 IPR024757 Cell division protein FtsZ, C-terminal AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 PRINTS PR00423 Cell division protein FtsZ signature 219 240 9.9E-47 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 PRINTS PR00423 Cell division protein FtsZ signature 133 154 9.9E-47 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 PRINTS PR00423 Cell division protein FtsZ signature 105 125 9.9E-47 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 PRINTS PR00423 Cell division protein FtsZ signature 196 218 9.9E-47 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 PANTHER PTHR30314 2 381 1.2E-152 T 22-04-2016 AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 25 179 1.6E-39 T 22-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 AMK43_RS00315 d5e74b142f0235c32e3b966ff193d430 395 PANTHER PTHR30314:SF3 2 381 1.2E-152 T 22-04-2016 AMK43_RS09010 62efebf3c677fa3f1c2296126e0f647f 504 Hamap MF_00186 Glycerol kinase [glpK]. 5 503 59.835 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMK43_RS09010 62efebf3c677fa3f1c2296126e0f647f 504 SUPERFAMILY SSF53067 6 261 2.85E-97 T 22-04-2016 AMK43_RS09010 62efebf3c677fa3f1c2296126e0f647f 504 PANTHER PTHR10196:SF9 1 504 8.0E-262 T 22-04-2016 AMK43_RS09010 62efebf3c677fa3f1c2296126e0f647f 504 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 258 1.8E-89 T 22-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 AMK43_RS09010 62efebf3c677fa3f1c2296126e0f647f 504 Gene3D G3DSA:3.30.420.40 260 503 5.9E-103 T 22-04-2016 AMK43_RS09010 62efebf3c677fa3f1c2296126e0f647f 504 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 368 388 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMK43_RS09010 62efebf3c677fa3f1c2296126e0f647f 504 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 137 149 - T 22-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMK43_RS09010 62efebf3c677fa3f1c2296126e0f647f 504 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 502 1.0E-229 T 22-04-2016 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMK43_RS09010 62efebf3c677fa3f1c2296126e0f647f 504 SUPERFAMILY SSF53067 261 502 6.96E-85 T 22-04-2016 AMK43_RS09010 62efebf3c677fa3f1c2296126e0f647f 504 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 268 456 2.1E-59 T 22-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 AMK43_RS09010 62efebf3c677fa3f1c2296126e0f647f 504 PANTHER PTHR10196 1 504 8.0E-262 T 22-04-2016 AMK43_RS09010 62efebf3c677fa3f1c2296126e0f647f 504 PIRSF PIRSF000538 5 504 1.7E-178 T 22-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 AMK43_RS09010 62efebf3c677fa3f1c2296126e0f647f 504 Gene3D G3DSA:3.30.420.40 3 259 2.4E-107 T 22-04-2016 AMK43_RS11015 3a55ea097818cb6ad4e1039974d14465 194 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 5 190 4.8E-33 T 22-04-2016 IPR011733 Conserved hypothetical CHP02185, integral membrane AMK43_RS11015 3a55ea097818cb6ad4e1039974d14465 194 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 8 190 1.2E-42 T 22-04-2016 IPR011733 Conserved hypothetical CHP02185, integral membrane AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 Pfam PF04998 RNA polymerase Rpb1, domain 5 725 1251 1.9E-63 T 22-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 618 6.6E-28 T 22-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 SUPERFAMILY SSF64484 1067 1311 0.0 T 22-04-2016 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 SUPERFAMILY SSF64484 5 901 0.0 T 22-04-2016 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1312 10.098 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 Pfam PF05000 RNA polymerase Rpb1, domain 4 649 713 1.6E-12 T 22-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 PANTHER PTHR19376 1112 1198 0.0 T 22-04-2016 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 PANTHER PTHR19376 1 900 0.0 T 22-04-2016 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 PANTHER PTHR19376 1239 1329 0.0 T 22-04-2016 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 PANTHER PTHR19376 926 1091 0.0 T 22-04-2016 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 SMART SM00663 224 503 2.3E-176 T 22-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 474 8.9E-36 T 22-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 Pfam PF04997 RNA polymerase Rpb1, domain 1 5 331 8.2E-87 T 22-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 PANTHER PTHR19376:SF32 1112 1198 0.0 T 22-04-2016 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 PANTHER PTHR19376:SF32 1 900 0.0 T 22-04-2016 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 PANTHER PTHR19376:SF32 1239 1329 0.0 T 22-04-2016 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 PANTHER PTHR19376:SF32 926 1091 0.0 T 22-04-2016 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 9 971 0.0 T 22-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 SUPERFAMILY SSF51246 1005 1056 2.04E-5 T 22-04-2016 IPR011054 Rudiment single hybrid motif AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 Gene3D G3DSA:2.40.40.20 338 365 3.5E-38 T 22-04-2016 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 Gene3D G3DSA:2.40.40.20 406 478 3.5E-38 T 22-04-2016 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 Gene3D G3DSA:2.40.50.100 1009 1057 7.6E-10 T 22-04-2016 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 Gene3D G3DSA:2.40.50.100 907 968 2.9E-5 T 22-04-2016 AMK43_RS03260 f7b9ecb0d06e0105ccbbd3d23af07735 1332 Gene3D G3DSA:2.40.50.100 1091 1148 3.1E-7 T 22-04-2016 AMK43_RS10230 238dbc46f575fef6d53f6e764b35ec45 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 82 4.5E-12 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS10230 238dbc46f575fef6d53f6e764b35ec45 102 PANTHER PTHR34581 1 102 3.6E-27 T 22-04-2016 AMK43_RS10230 238dbc46f575fef6d53f6e764b35ec45 102 SUPERFAMILY SSF52794 1 101 2.25E-22 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS10230 238dbc46f575fef6d53f6e764b35ec45 102 PANTHER PTHR34581:SF2 1 102 3.6E-27 T 22-04-2016 AMK43_RS10230 238dbc46f575fef6d53f6e764b35ec45 102 Gene3D G3DSA:3.40.50.270 1 101 3.5E-23 T 22-04-2016 AMK43_RS06005 6c947299d54998b56bd96660992fc220 456 PANTHER PTHR11206 1 453 2.4E-74 T 22-04-2016 AMK43_RS06005 6c947299d54998b56bd96660992fc220 456 Pfam PF01554 MatE 18 183 1.0E-35 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS06005 6c947299d54998b56bd96660992fc220 456 Pfam PF01554 MatE 255 411 2.8E-20 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS06005 6c947299d54998b56bd96660992fc220 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 18 417 1.6E-68 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS06005 6c947299d54998b56bd96660992fc220 456 PIRSF PIRSF006603 1 456 1.2E-72 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS06005 6c947299d54998b56bd96660992fc220 456 PANTHER PTHR11206:SF146 1 453 2.4E-74 T 22-04-2016 AMK43_RS07620 ce7d718bd563b167a5c2e718d93b8998 389 Pfam PF00800 Prephenate dehydratase 108 295 1.2E-48 T 22-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 AMK43_RS07620 ce7d718bd563b167a5c2e718d93b8998 389 Gene3D G3DSA:3.30.70.260 301 384 7.4E-28 T 22-04-2016 AMK43_RS07620 ce7d718bd563b167a5c2e718d93b8998 389 PANTHER PTHR21022 6 389 1.1E-88 T 22-04-2016 AMK43_RS07620 ce7d718bd563b167a5c2e718d93b8998 389 Gene3D G3DSA:3.40.190.10 203 282 2.0E-24 T 22-04-2016 AMK43_RS07620 ce7d718bd563b167a5c2e718d93b8998 389 Gene3D G3DSA:1.20.59.10 3 87 3.0E-20 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMK43_RS07620 ce7d718bd563b167a5c2e718d93b8998 389 TIGRFAM TIGR01805 CM_mono_grmpos: chorismate mutase 6 86 1.8E-25 T 22-04-2016 IPR011279 Chorismate mutase, Gram-positive AMK43_RS07620 ce7d718bd563b167a5c2e718d93b8998 389 PIRSF PIRSF001500 1 387 6.5E-91 T 22-04-2016 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 AMK43_RS07620 ce7d718bd563b167a5c2e718d93b8998 389 PANTHER PTHR21022:SF0 6 389 1.1E-88 T 22-04-2016 AMK43_RS07620 ce7d718bd563b167a5c2e718d93b8998 389 SMART SM00830 10 89 2.9E-23 T 22-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMK43_RS07620 ce7d718bd563b167a5c2e718d93b8998 389 Pfam PF01817 Chorismate mutase type II 10 87 1.6E-18 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMK43_RS07620 ce7d718bd563b167a5c2e718d93b8998 389 SUPERFAMILY SSF53850 106 301 1.52E-45 T 22-04-2016 AMK43_RS07620 ce7d718bd563b167a5c2e718d93b8998 389 Gene3D G3DSA:3.40.190.10 105 202 1.6E-20 T 22-04-2016 AMK43_RS07620 ce7d718bd563b167a5c2e718d93b8998 389 SUPERFAMILY SSF48600 5 87 4.76E-19 T 22-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 AMK43_RS07620 ce7d718bd563b167a5c2e718d93b8998 389 SUPERFAMILY SSF55021 289 383 1.52E-23 T 22-04-2016 AMK43_RS05075 137d05a39990482e343f74c9b4736db8 458 PANTHER PTHR33989:SF4 1 457 1.1E-152 T 22-04-2016 AMK43_RS05075 137d05a39990482e343f74c9b4736db8 458 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 13 437 2.4E-118 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AMK43_RS05075 137d05a39990482e343f74c9b4736db8 458 PIRSF PIRSF006351 1 451 1.9E-132 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AMK43_RS05075 137d05a39990482e343f74c9b4736db8 458 PANTHER PTHR33989 1 457 1.1E-152 T 22-04-2016 AMK43_RS05075 137d05a39990482e343f74c9b4736db8 458 Pfam PF02378 Phosphotransferase system, EIIC 30 367 5.8E-56 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMK43_RS04315 9b047287623733434d08837ef8200a0e 383 PIRSF PIRSF005962 1 380 3.5E-116 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 AMK43_RS04315 9b047287623733434d08837ef8200a0e 383 PANTHER PTHR11014 18 380 1.4E-147 T 22-04-2016 AMK43_RS04315 9b047287623733434d08837ef8200a0e 383 PANTHER PTHR11014:SF107 18 380 1.4E-147 T 22-04-2016 AMK43_RS04315 9b047287623733434d08837ef8200a0e 383 Pfam PF01546 Peptidase family M20/M25/M40 69 372 1.8E-26 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK43_RS04315 9b047287623733434d08837ef8200a0e 383 SUPERFAMILY SSF53187 294 375 4.09E-72 T 22-04-2016 AMK43_RS04315 9b047287623733434d08837ef8200a0e 383 SUPERFAMILY SSF53187 5 193 4.09E-72 T 22-04-2016 AMK43_RS04315 9b047287623733434d08837ef8200a0e 383 Pfam PF07687 Peptidase dimerisation domain 181 277 1.9E-7 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS04315 9b047287623733434d08837ef8200a0e 383 SUPERFAMILY SSF55031 179 290 9.29E-28 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS04315 9b047287623733434d08837ef8200a0e 383 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 362 7.7E-110 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 AMK43_RS04315 9b047287623733434d08837ef8200a0e 383 Gene3D G3DSA:3.30.70.360 177 292 3.2E-34 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS04315 9b047287623733434d08837ef8200a0e 383 Gene3D G3DSA:3.40.630.10 293 377 2.3E-83 T 22-04-2016 AMK43_RS04315 9b047287623733434d08837ef8200a0e 383 Gene3D G3DSA:3.40.630.10 5 174 2.3E-83 T 22-04-2016 AMK43_RS08475 db27b4517eaf0ced387a55975d7b16c7 529 Pfam PF08984 Domain of unknown function (DUF1858) 456 515 4.4E-11 T 22-04-2016 IPR015077 Domain of unknown function DUF1858 AMK43_RS08475 db27b4517eaf0ced387a55975d7b16c7 529 PANTHER PTHR24423:SF558 145 242 4.9E-33 T 22-04-2016 AMK43_RS08475 db27b4517eaf0ced387a55975d7b16c7 529 PANTHER PTHR24423:SF558 304 522 4.9E-33 T 22-04-2016 AMK43_RS08475 db27b4517eaf0ced387a55975d7b16c7 529 PANTHER PTHR24423 145 242 4.9E-33 T 22-04-2016 AMK43_RS08475 db27b4517eaf0ced387a55975d7b16c7 529 PANTHER PTHR24423 304 522 4.9E-33 T 22-04-2016 AMK43_RS08475 db27b4517eaf0ced387a55975d7b16c7 529 SUPERFAMILY SSF140683 455 524 3.66E-9 T 22-04-2016 AMK43_RS08475 db27b4517eaf0ced387a55975d7b16c7 529 Gene3D G3DSA:1.20.120.520 92 307 5.9E-49 T 22-04-2016 AMK43_RS08475 db27b4517eaf0ced387a55975d7b16c7 529 Gene3D G3DSA:3.30.450.20 308 427 5.5E-43 T 22-04-2016 AMK43_RS08475 db27b4517eaf0ced387a55975d7b16c7 529 Pfam PF01814 Hemerythrin HHE cation binding domain 98 218 8.3E-7 T 22-04-2016 IPR012312 Haemerythrin-like AMK43_RS08475 db27b4517eaf0ced387a55975d7b16c7 529 SUPERFAMILY SSF55785 305 408 1.81E-7 T 22-04-2016 IPR000014 PAS domain AMK43_RS08475 db27b4517eaf0ced387a55975d7b16c7 529 Pfam PF13596 PAS domain 308 413 4.7E-29 T 22-04-2016 AMK43_RS08475 db27b4517eaf0ced387a55975d7b16c7 529 Gene3D G3DSA:1.10.3910.10 456 525 7.2E-8 T 22-04-2016 IPR015077 Domain of unknown function DUF1858 AMK43_RS00895 2898bba0b4a7bc9d9016a15e4fb22d8f 414 Pfam PF04055 Radical SAM superfamily 62 200 6.6E-8 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS00895 2898bba0b4a7bc9d9016a15e4fb22d8f 414 PANTHER PTHR21180 134 404 4.4E-140 T 22-04-2016 AMK43_RS00895 2898bba0b4a7bc9d9016a15e4fb22d8f 414 Gene3D G3DSA:3.20.20.70 51 188 6.9E-11 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS00895 2898bba0b4a7bc9d9016a15e4fb22d8f 414 SUPERFAMILY SSF102114 45 200 6.8E-14 T 22-04-2016 AMK43_RS00895 2898bba0b4a7bc9d9016a15e4fb22d8f 414 Gene3D G3DSA:1.10.150.320 325 356 3.5E-5 T 22-04-2016 AMK43_RS00895 2898bba0b4a7bc9d9016a15e4fb22d8f 414 TIGRFAM TIGR03916 rSAM_link_UDG: putative DNA modification/repair radical SAM protein 5 410 2.4E-195 T 22-04-2016 IPR023874 DNA modification/repair radical SAM protein, putative AMK43_RS00895 2898bba0b4a7bc9d9016a15e4fb22d8f 414 PANTHER PTHR21180:SF9 134 404 4.4E-140 T 22-04-2016 IPR023874 DNA modification/repair radical SAM protein, putative AMK43_RS00895 2898bba0b4a7bc9d9016a15e4fb22d8f 414 SUPERFAMILY SSF47781 305 381 1.45E-12 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK43_RS09370 eaf6b945b2cb1d30bcde5105baa3ddcc 357 SUPERFAMILY SSF50685 259 352 1.12E-15 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK43_RS09370 eaf6b945b2cb1d30bcde5105baa3ddcc 357 Pfam PF03330 Lytic transglycolase 265 352 2.2E-25 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK43_RS09370 eaf6b945b2cb1d30bcde5105baa3ddcc 357 Gene3D G3DSA:2.40.40.10 260 355 1.1E-9 T 22-04-2016 IPR009009 RlpA-like protein, double-psi beta-barrel domain AMK43_RS09370 eaf6b945b2cb1d30bcde5105baa3ddcc 357 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 266 355 9.8E-42 T 22-04-2016 IPR012997 Rare lipoprotein A AMK43_RS09370 eaf6b945b2cb1d30bcde5105baa3ddcc 357 PANTHER PTHR34183 253 355 1.3E-44 T 22-04-2016 AMK43_RS09370 eaf6b945b2cb1d30bcde5105baa3ddcc 357 PANTHER PTHR34183:SF2 253 355 1.3E-44 T 22-04-2016 AMK43_RS05700 8f90a34e5e40ddb5fcdf3bdb10faa3ab 306 SUPERFAMILY SSF55846 65 216 8.51E-46 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMK43_RS05700 8f90a34e5e40ddb5fcdf3bdb10faa3ab 306 PANTHER PTHR30417:SF5 71 303 9.5E-69 T 22-04-2016 AMK43_RS05700 8f90a34e5e40ddb5fcdf3bdb10faa3ab 306 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 81 206 7.7E-19 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMK43_RS05700 8f90a34e5e40ddb5fcdf3bdb10faa3ab 306 Pfam PF01471 Putative peptidoglycan binding domain 243 296 7.0E-10 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK43_RS05700 8f90a34e5e40ddb5fcdf3bdb10faa3ab 306 SMART SM00644 68 205 6.4E-25 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMK43_RS05700 8f90a34e5e40ddb5fcdf3bdb10faa3ab 306 SUPERFAMILY SSF47090 235 304 6.47E-21 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK43_RS05700 8f90a34e5e40ddb5fcdf3bdb10faa3ab 306 Gene3D G3DSA:3.40.80.10 67 225 1.1E-51 T 22-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 AMK43_RS05700 8f90a34e5e40ddb5fcdf3bdb10faa3ab 306 PANTHER PTHR30417 71 303 9.5E-69 T 22-04-2016 AMK43_RS05700 8f90a34e5e40ddb5fcdf3bdb10faa3ab 306 Gene3D G3DSA:1.10.101.10 234 298 1.7E-6 T 22-04-2016 IPR002477 Peptidoglycan binding-like AMK43_RS01445 5690ac7e194ec71d0fe352a7a7d4aa27 288 Pfam PF03537 Glycoside-hydrolase family GH114 170 274 1.6E-12 T 22-04-2016 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain AMK43_RS01445 5690ac7e194ec71d0fe352a7a7d4aa27 288 PANTHER PTHR35882 102 281 9.7E-39 T 22-04-2016 AMK43_RS01445 5690ac7e194ec71d0fe352a7a7d4aa27 288 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 162 175 2.4E-21 T 22-04-2016 IPR016062 Hypothetical protein TM1410-related AMK43_RS01445 5690ac7e194ec71d0fe352a7a7d4aa27 288 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 218 235 2.4E-21 T 22-04-2016 IPR016062 Hypothetical protein TM1410-related AMK43_RS01445 5690ac7e194ec71d0fe352a7a7d4aa27 288 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 255 274 2.4E-21 T 22-04-2016 IPR016062 Hypothetical protein TM1410-related AMK43_RS01445 5690ac7e194ec71d0fe352a7a7d4aa27 288 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 195 214 2.4E-21 T 22-04-2016 IPR016062 Hypothetical protein TM1410-related AMK43_RS01445 5690ac7e194ec71d0fe352a7a7d4aa27 288 PRINTS PR01545 Thermotoga maritima hypothetical protein TM1410 signature 237 255 2.4E-21 T 22-04-2016 IPR016062 Hypothetical protein TM1410-related AMK43_RS01445 5690ac7e194ec71d0fe352a7a7d4aa27 288 SUPERFAMILY SSF51445 163 276 2.11E-21 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS04980 f6685ce97a51da9a1cf582c0d438323f 370 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 181 194 - T 22-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 AMK43_RS04980 f6685ce97a51da9a1cf582c0d438323f 370 SUPERFAMILY SSF52540 12 148 9.77E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04980 f6685ce97a51da9a1cf582c0d438323f 370 Hamap MF_00124 Thymidine kinase [tdk]. 12 197 34.369 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 AMK43_RS04980 f6685ce97a51da9a1cf582c0d438323f 370 SUPERFAMILY SSF57716 149 205 1.28E-16 T 22-04-2016 AMK43_RS04980 f6685ce97a51da9a1cf582c0d438323f 370 Pfam PF00265 Thymidine kinase 13 194 1.8E-54 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 AMK43_RS04980 f6685ce97a51da9a1cf582c0d438323f 370 PANTHER PTHR11441 10 269 2.1E-69 T 22-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 AMK43_RS04980 f6685ce97a51da9a1cf582c0d438323f 370 Gene3D G3DSA:3.40.50.300 259 363 3.4E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04980 f6685ce97a51da9a1cf582c0d438323f 370 Gene3D G3DSA:3.30.60.20 149 195 9.2E-13 T 22-04-2016 AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 PANTHER PTHR11014:SF3 134 411 4.7E-173 T 22-04-2016 AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 Pfam PF01546 Peptidase family M20/M25/M40 142 405 2.4E-13 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 Hamap MF_00550 Peptidase T [pepT]. 4 407 57.092 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 Gene3D G3DSA:3.30.70.360 213 322 3.3E-44 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 PANTHER PTHR11014:SF3 2 93 4.7E-173 T 22-04-2016 AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 4 410 2.2E-183 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 SUPERFAMILY SSF55031 212 323 3.45E-36 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 Gene3D G3DSA:3.40.630.10 3 212 2.2E-119 T 22-04-2016 AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 Gene3D G3DSA:3.40.630.10 325 409 2.2E-119 T 22-04-2016 AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 SUPERFAMILY SSF53187 5 213 2.09E-78 T 22-04-2016 AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 SUPERFAMILY SSF53187 325 405 2.09E-78 T 22-04-2016 AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 PIRSF PIRSF037215 2 411 2.4E-188 T 22-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 Pfam PF07687 Peptidase dimerisation domain 210 309 3.6E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 PANTHER PTHR11014 2 93 4.7E-173 T 22-04-2016 AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 141 180 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMK43_RS08155 a167b178d74e4f0f6ca5aa47c695cd06 411 PANTHER PTHR11014 134 411 4.7E-173 T 22-04-2016 AMK43_RS00595 902df68717e3e6d02645cbd13d1a58da 487 Pfam PF01425 Amidase 24 468 1.1E-153 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK43_RS00595 902df68717e3e6d02645cbd13d1a58da 487 Gene3D G3DSA:3.90.1300.10 3 481 5.9E-174 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK43_RS00595 902df68717e3e6d02645cbd13d1a58da 487 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 478 4.0E-190 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK43_RS00595 902df68717e3e6d02645cbd13d1a58da 487 ProSitePatterns PS00571 Amidases signature. 156 187 - T 22-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK43_RS00595 902df68717e3e6d02645cbd13d1a58da 487 PANTHER PTHR11895:SF7 2 486 4.3E-212 T 22-04-2016 AMK43_RS00595 902df68717e3e6d02645cbd13d1a58da 487 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 480 91.206 T 22-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK43_RS00595 902df68717e3e6d02645cbd13d1a58da 487 PANTHER PTHR11895 2 486 4.3E-212 T 22-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK43_RS00595 902df68717e3e6d02645cbd13d1a58da 487 SUPERFAMILY SSF75304 1 483 5.76E-156 T 22-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 AMK43_RS08095 97b0361371234bd28ec908952d1ff908 249 SUPERFAMILY SSF53335 6 195 7.45E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS08095 97b0361371234bd28ec908952d1ff908 249 Pfam PF08241 Methyltransferase domain 39 127 3.5E-20 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMK43_RS08095 97b0361371234bd28ec908952d1ff908 249 PANTHER PTHR10108 24 197 3.0E-27 T 22-04-2016 AMK43_RS08095 97b0361371234bd28ec908952d1ff908 249 Gene3D G3DSA:3.40.50.150 22 245 5.7E-41 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07020 6ed82b9c958df4e6415995b6ca218e5b 351 Pfam PF00107 Zinc-binding dehydrogenase 174 300 1.6E-28 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK43_RS07020 6ed82b9c958df4e6415995b6ca218e5b 351 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 133 9.0E-31 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK43_RS07020 6ed82b9c958df4e6415995b6ca218e5b 351 Gene3D G3DSA:3.40.50.720 167 286 1.8E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS07020 6ed82b9c958df4e6415995b6ca218e5b 351 Gene3D G3DSA:3.90.180.10 1 166 1.2E-61 T 22-04-2016 IPR011032 GroES-like AMK43_RS07020 6ed82b9c958df4e6415995b6ca218e5b 351 SUPERFAMILY SSF51735 136 306 3.94E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS07020 6ed82b9c958df4e6415995b6ca218e5b 351 PANTHER PTHR11695:SF498 14 347 5.7E-147 T 22-04-2016 AMK43_RS07020 6ed82b9c958df4e6415995b6ca218e5b 351 PANTHER PTHR11695 14 347 5.7E-147 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK43_RS07020 6ed82b9c958df4e6415995b6ca218e5b 351 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 AMK43_RS07020 6ed82b9c958df4e6415995b6ca218e5b 351 SMART SM00829 10 336 7.9E-9 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK43_RS07020 6ed82b9c958df4e6415995b6ca218e5b 351 SUPERFAMILY SSF50129 1 171 3.5E-50 T 22-04-2016 IPR011032 GroES-like AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 Pfam PF13291 ACT domain 630 708 9.1E-11 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 SMART SM00954 226 336 1.9E-59 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 Gene3D G3DSA:3.30.460.10 169 315 8.4E-52 T 22-04-2016 AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 PANTHER PTHR21262 1 711 0.0 T 22-04-2016 AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 SUPERFAMILY SSF81301 171 379 2.29E-60 T 22-04-2016 AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 Gene3D G3DSA:3.10.20.30 375 436 4.9E-20 T 22-04-2016 IPR012675 Beta-grasp domain AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 SUPERFAMILY SSF109604 11 182 9.73E-70 T 22-04-2016 AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 Gene3D G3DSA:3.30.70.260 632 708 4.7E-6 T 22-04-2016 AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 SUPERFAMILY SSF55021 632 709 3.28E-5 T 22-04-2016 AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 Pfam PF13328 HD domain 19 166 1.6E-48 T 22-04-2016 IPR003607 HD/PDEase domain AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 Pfam PF02824 TGS domain 375 434 3.4E-17 T 22-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 Pfam PF04607 Region found in RelA / SpoT proteins 226 336 7.3E-38 T 22-04-2016 IPR007685 RelA/SpoT GO:0015969 AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 19 708 5.7E-220 T 22-04-2016 IPR004811 RelA/SpoT family GO:0015969 AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 PANTHER PTHR21262:SF0 1 711 0.0 T 22-04-2016 AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 SUPERFAMILY SSF81271 367 434 1.37E-17 T 22-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 AMK43_RS09860 cffe10c97926f0e170acf4d083c880aa 711 SMART SM00471 34 144 7.2E-11 T 22-04-2016 IPR003607 HD/PDEase domain AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 Gene3D G3DSA:3.40.1110.10 318 519 9.8E-61 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 SUPERFAMILY SSF81660 333 524 3.27E-53 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 163 177 6.4E-41 T 22-04-2016 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 638 650 6.4E-41 T 22-04-2016 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 633 6.4E-41 T 22-04-2016 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 512 523 6.4E-41 T 22-04-2016 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 327 341 6.4E-41 T 22-04-2016 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 544 6.4E-41 T 22-04-2016 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 SUPERFAMILY SSF81653 117 226 3.53E-29 T 22-04-2016 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 Gene3D G3DSA:2.70.150.10 12 53 2.0E-43 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 Gene3D G3DSA:2.70.150.10 111 226 2.0E-43 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 Pfam PF00689 Cation transporting ATPase, C-terminus 698 885 1.6E-50 T 22-04-2016 IPR006068 Cation-transporting P-type ATPase, C-terminal AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 SUPERFAMILY SSF56784 325 345 1.39E-62 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 SUPERFAMILY SSF56784 470 718 1.39E-62 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 SMART SM00831 1 75 1.5E-25 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 Pfam PF00122 E1-E2 ATPase 83 318 5.2E-65 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 Gene3D G3DSA:1.20.1110.10 583 889 1.3E-125 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 Gene3D G3DSA:1.20.1110.10 54 110 1.3E-125 T 22-04-2016 IPR023298 P-type ATPase, transmembrane domain AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 Pfam PF00690 Cation transporter/ATPase, N-terminus 2 69 1.4E-20 T 22-04-2016 IPR004014 Cation-transporting P-type ATPase, N-terminal AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 Pfam PF00702 haloacid dehalogenase-like hydrolase 323 628 1.1E-20 T 22-04-2016 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 580 704 6.1E-37 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 85 180 3.8E-20 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 215 348 3.2E-28 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 614 630 1.1E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 646 671 1.1E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 473 491 1.1E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 586 602 1.1E-18 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 PANTHER PTHR24093 793 893 0.0 T 22-04-2016 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 PANTHER PTHR24093 2 772 0.0 T 22-04-2016 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 329 335 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 SUPERFAMILY SSF81665 228 321 1.57E-133 T 22-04-2016 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 SUPERFAMILY SSF81665 2 116 1.57E-133 T 22-04-2016 AMK43_RS04430 cf018f969159fdfef8ee65e5e5c135ea 895 SUPERFAMILY SSF81665 664 890 1.57E-133 T 22-04-2016 AMK43_RS08030 271bb58885fba65a3136ec1baaa77334 423 PANTHER PTHR36932:SF2 2 391 4.6E-152 T 22-04-2016 AMK43_RS08030 271bb58885fba65a3136ec1baaa77334 423 TIGRFAM TIGR02304 aden_form_hyp: putative adenylate-forming enzyme 3 422 8.2E-205 T 22-04-2016 IPR012685 Conserved hypothetical protein CHP02304, F390 synthetase-related AMK43_RS08030 271bb58885fba65a3136ec1baaa77334 423 PANTHER PTHR36932 2 391 4.6E-152 T 22-04-2016 AMK43_RS08030 271bb58885fba65a3136ec1baaa77334 423 Gene3D G3DSA:3.40.50.980 173 255 4.0E-8 T 22-04-2016 AMK43_RS08030 271bb58885fba65a3136ec1baaa77334 423 SUPERFAMILY SSF56801 171 258 7.98E-8 T 22-04-2016 AMK43_RS03865 dd65ce0b4ba9059a71bccf1419d9846a 151 TIGRFAM TIGR00158 L9: ribosomal protein bL9 3 149 1.4E-40 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS03865 dd65ce0b4ba9059a71bccf1419d9846a 151 Gene3D G3DSA:3.40.5.10 3 52 7.2E-23 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal AMK43_RS03865 dd65ce0b4ba9059a71bccf1419d9846a 151 Pfam PF03948 Ribosomal protein L9, C-terminal domain 66 148 6.0E-26 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal AMK43_RS03865 dd65ce0b4ba9059a71bccf1419d9846a 151 PANTHER PTHR21368 1 145 1.4E-40 T 22-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS03865 dd65ce0b4ba9059a71bccf1419d9846a 151 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 3 150 23.482 T 22-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS03865 dd65ce0b4ba9059a71bccf1419d9846a 151 SUPERFAMILY SSF55653 62 149 3.27E-24 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal AMK43_RS03865 dd65ce0b4ba9059a71bccf1419d9846a 151 Gene3D G3DSA:3.10.430.100 64 150 5.2E-27 T 22-04-2016 IPR020069 Ribosomal protein L9, C-terminal AMK43_RS03865 dd65ce0b4ba9059a71bccf1419d9846a 151 Pfam PF01281 Ribosomal protein L9, N-terminal domain 3 49 5.2E-22 T 22-04-2016 IPR020070 Ribosomal protein L9, N-terminal AMK43_RS03865 dd65ce0b4ba9059a71bccf1419d9846a 151 SUPERFAMILY SSF55658 3 58 1.22E-16 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 Pfam PF13424 Tetratricopeptide repeat 266 329 2.1E-7 T 22-04-2016 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 Pfam PF13374 Tetratricopeptide repeat 437 463 2.9E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 Gene3D G3DSA:1.25.40.10 80 307 3.2E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 Gene3D G3DSA:1.25.40.10 308 497 2.1E-35 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 PANTHER PTHR23083 401 495 5.1E-31 T 22-04-2016 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 PANTHER PTHR23083 56 209 5.1E-31 T 22-04-2016 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 PANTHER PTHR23083 3 11 5.1E-31 T 22-04-2016 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 PANTHER PTHR23083 238 368 5.1E-31 T 22-04-2016 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SUPERFAMILY SSF81901 34 209 8.63E-12 T 22-04-2016 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SUPERFAMILY SSF48452 234 366 1.39E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SMART SM00028 263 296 7.0E-5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SMART SM00028 305 338 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SMART SM00028 231 262 320.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SMART SM00028 404 437 16.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SMART SM00028 468 501 0.014 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SMART SM00028 339 371 320.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SMART SM00028 172 201 250.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SUPERFAMILY SSF81901 340 501 2.53E-27 T 22-04-2016 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 Pfam PF13181 Tetratricopeptide repeat 339 367 0.03 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 Pfam PF13181 Tetratricopeptide repeat 470 496 0.002 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 Pfam PF13181 Tetratricopeptide repeat 236 258 0.072 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SMART SM00671 468 499 26.0 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SMART SM00671 235 262 220.0 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SMART SM00671 263 294 16.0 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SMART SM00671 372 403 190.0 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SMART SM00671 404 435 6.9 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SMART SM00671 436 467 0.015 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS07420 cacd4af438d2a6bf0864e85fab1b7c37 523 SMART SM00671 168 199 87.0 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS04905 9e3b46c93c7758fa74da44ca7b23a833 175 SUPERFAMILY SSF55315 68 171 9.76E-10 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like AMK43_RS04905 9e3b46c93c7758fa74da44ca7b23a833 175 PANTHER PTHR34215:SF1 1 175 3.5E-12 T 22-04-2016 AMK43_RS04905 9e3b46c93c7758fa74da44ca7b23a833 175 PANTHER PTHR34215 1 175 3.5E-12 T 22-04-2016 AMK43_RS04905 9e3b46c93c7758fa74da44ca7b23a833 175 Pfam PF04296 Protein of unknown function (DUF448) 4 60 9.6E-14 T 22-04-2016 IPR007393 Domain of unknown function DUF448 AMK43_RS04905 9e3b46c93c7758fa74da44ca7b23a833 175 Gene3D G3DSA:3.30.1230.10 1 59 9.6E-15 T 22-04-2016 IPR007393 Domain of unknown function DUF448 AMK43_RS04905 9e3b46c93c7758fa74da44ca7b23a833 175 SUPERFAMILY SSF64376 1 63 7.32E-12 T 22-04-2016 IPR007393 Domain of unknown function DUF448 AMK43_RS04905 9e3b46c93c7758fa74da44ca7b23a833 175 Gene3D G3DSA:3.30.1330.30 73 161 9.1E-5 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like AMK43_RS03050 c89f9532f74695e32b61145437ee3840 367 SUPERFAMILY SSF50331 237 363 1.3E-13 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK43_RS03050 c89f9532f74695e32b61145437ee3840 367 PANTHER PTHR24220 6 291 6.8E-144 T 22-04-2016 AMK43_RS03050 c89f9532f74695e32b61145437ee3840 367 SMART SM00382 29 212 1.4E-21 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS03050 c89f9532f74695e32b61145437ee3840 367 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 35 360 2.8E-112 T 22-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 AMK43_RS03050 c89f9532f74695e32b61145437ee3840 367 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS03050 c89f9532f74695e32b61145437ee3840 367 Pfam PF00005 ABC transporter 20 162 1.0E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS03050 c89f9532f74695e32b61145437ee3840 367 Pfam PF08402 TOBE domain 279 363 1.1E-8 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK43_RS03050 c89f9532f74695e32b61145437ee3840 367 Gene3D G3DSA:3.40.50.300 3 235 9.3E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03050 c89f9532f74695e32b61145437ee3840 367 PANTHER PTHR24220:SF150 6 291 6.8E-144 T 22-04-2016 AMK43_RS03050 c89f9532f74695e32b61145437ee3840 367 SUPERFAMILY SSF52540 5 243 4.23E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06560 d52da1a87aced896fbc757acf67f0e1f 443 Gene3D G3DSA:3.60.20.10 5 262 7.2E-62 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK43_RS06560 d52da1a87aced896fbc757acf67f0e1f 443 Gene3D G3DSA:3.40.50.2020 275 442 7.3E-43 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS06560 d52da1a87aced896fbc757acf67f0e1f 443 PANTHER PTHR11907:SF0 2 443 4.0E-201 T 22-04-2016 AMK43_RS06560 d52da1a87aced896fbc757acf67f0e1f 443 PIRSF PIRSF000485 1 443 2.7E-158 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AMK43_RS06560 d52da1a87aced896fbc757acf67f0e1f 443 Pfam PF00156 Phosphoribosyl transferase domain 287 390 2.0E-9 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK43_RS06560 d52da1a87aced896fbc757acf67f0e1f 443 PANTHER PTHR11907 2 443 4.0E-201 T 22-04-2016 AMK43_RS06560 d52da1a87aced896fbc757acf67f0e1f 443 SUPERFAMILY SSF53271 255 442 4.31E-63 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS06560 d52da1a87aced896fbc757acf67f0e1f 443 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 5 441 1.4E-140 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AMK43_RS06560 d52da1a87aced896fbc757acf67f0e1f 443 SUPERFAMILY SSF56235 5 238 2.06E-61 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK43_RS06560 d52da1a87aced896fbc757acf67f0e1f 443 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 4 443 41.078 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AMK43_RS06560 d52da1a87aced896fbc757acf67f0e1f 443 Pfam PF13522 Glutamine amidotransferase domain 75 206 1.4E-20 T 22-04-2016 AMK43_RS07175 8424e0daf4e24c24246f2a73a0e84364 286 Gene3D G3DSA:1.10.287.80 235 280 1.3E-27 T 22-04-2016 AMK43_RS07175 8424e0daf4e24c24246f2a73a0e84364 286 PANTHER PTHR11693 1 286 1.3E-93 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS07175 8424e0daf4e24c24246f2a73a0e84364 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 285 31.55 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS07175 8424e0daf4e24c24246f2a73a0e84364 286 PRINTS PR00126 ATP synthase gamma subunit signature 75 94 1.8E-35 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS07175 8424e0daf4e24c24246f2a73a0e84364 286 PRINTS PR00126 ATP synthase gamma subunit signature 263 284 1.8E-35 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS07175 8424e0daf4e24c24246f2a73a0e84364 286 PRINTS PR00126 ATP synthase gamma subunit signature 168 185 1.8E-35 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS07175 8424e0daf4e24c24246f2a73a0e84364 286 PRINTS PR00126 ATP synthase gamma subunit signature 232 251 1.8E-35 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS07175 8424e0daf4e24c24246f2a73a0e84364 286 Gene3D G3DSA:3.40.1380.10 72 194 1.8E-37 T 22-04-2016 AMK43_RS07175 8424e0daf4e24c24246f2a73a0e84364 286 Pfam PF00231 ATP synthase 4 285 3.7E-86 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS07175 8424e0daf4e24c24246f2a73a0e84364 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 4 285 1.2E-90 T 22-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS07175 8424e0daf4e24c24246f2a73a0e84364 286 SUPERFAMILY SSF52943 4 285 4.58E-81 T 22-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain AMK43_RS07175 8424e0daf4e24c24246f2a73a0e84364 286 Gene3D G3DSA:1.10.287.80 20 61 4.6E-24 T 22-04-2016 AMK43_RS07175 8424e0daf4e24c24246f2a73a0e84364 286 Gene3D G3DSA:1.10.287.80 200 234 4.6E-24 T 22-04-2016 AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 Gene3D G3DSA:3.40.50.300 5 52 9.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 Gene3D G3DSA:3.40.50.300 603 668 3.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 Gene3D G3DSA:3.40.50.300 481 600 9.8E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 Gene3D G3DSA:3.40.50.300 821 939 3.7E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 924 0.0 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 Pfam PF00005 ABC transporter 624 860 4.5E-8 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 Gene3D G3DSA:1.20.1580.10 694 820 3.6E-55 T 22-04-2016 AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 SUPERFAMILY SSF52540 7 206 2.62E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 SUPERFAMILY SSF52540 419 572 2.62E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 PANTHER PTHR32282 1 941 0.0 T 22-04-2016 AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 Gene3D G3DSA:3.30.1490.20 202 250 1.2E-15 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 Gene3D G3DSA:3.30.1490.20 131 155 1.2E-15 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 SUPERFAMILY SSF52540 620 913 2.49E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 Gene3D G3DSA:1.20.1580.10 92 130 4.6E-53 T 22-04-2016 AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 Gene3D G3DSA:1.20.1580.10 410 480 4.6E-53 T 22-04-2016 AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 Gene3D G3DSA:1.20.1580.10 252 286 4.6E-53 T 22-04-2016 AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 940 21.925 T 22-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 Gene3D G3DSA:1.10.8.280 288 409 6.8E-27 T 22-04-2016 AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 PANTHER PTHR32282:SF2 1 941 0.0 T 22-04-2016 AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS07030 26dde883e6f66290495cff7a9e2d20ad 941 ProSitePatterns PS00211 ABC transporters family signature. 490 504 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS09725 d3c580ed2d13f9cd2b1736f5d2315f7e 380 PIRSF PIRSF036593 1 380 1.2E-182 T 22-04-2016 IPR012116 Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit AMK43_RS09725 d3c580ed2d13f9cd2b1736f5d2315f7e 380 Gene3D G3DSA:3.40.718.10 73 288 4.6E-24 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK43_RS09725 d3c580ed2d13f9cd2b1736f5d2315f7e 380 Pfam PF02504 Fatty acid synthesis protein 26 358 1.4E-59 T 22-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 AMK43_RS09725 d3c580ed2d13f9cd2b1736f5d2315f7e 380 SUPERFAMILY SSF53659 26 226 1.15E-19 T 22-04-2016 AMK43_RS09415 fe7839889cc1b3de2b316c04e8b9cc43 158 PANTHER PTHR23083 9 132 4.2E-14 T 22-04-2016 AMK43_RS09415 fe7839889cc1b3de2b316c04e8b9cc43 158 Pfam PF12688 Tetratrico peptide repeat 37 132 1.1E-10 T 22-04-2016 AMK43_RS09415 fe7839889cc1b3de2b316c04e8b9cc43 158 SUPERFAMILY SSF48452 7 134 9.96E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS09415 fe7839889cc1b3de2b316c04e8b9cc43 158 Gene3D G3DSA:1.25.40.10 8 137 9.5E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS09415 fe7839889cc1b3de2b316c04e8b9cc43 158 SMART SM00028 70 103 0.0016 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS09415 fe7839889cc1b3de2b316c04e8b9cc43 158 SMART SM00028 33 66 99.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS09415 fe7839889cc1b3de2b316c04e8b9cc43 158 Pfam PF13181 Tetratricopeptide repeat 10 32 0.2 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS06815 e209e411a2721daf6453996b6124949d 302 PANTHER PTHR37307 2 300 3.1E-67 T 22-04-2016 AMK43_RS06815 e209e411a2721daf6453996b6124949d 302 Pfam PF02650 WhiA C-terminal HTH domain 211 292 9.9E-25 T 22-04-2016 IPR023054 Sporulation regulator WhiA, C-terminal AMK43_RS06815 e209e411a2721daf6453996b6124949d 302 Gene3D G3DSA:1.10.10.10 210 290 2.3E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS06815 e209e411a2721daf6453996b6124949d 302 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 291 6.0E-46 T 22-04-2016 AMK43_RS06815 e209e411a2721daf6453996b6124949d 302 Pfam PF14527 WhiA LAGLIDADG-like domain 118 208 4.1E-16 T 22-04-2016 AMK43_RS06815 e209e411a2721daf6453996b6124949d 302 SUPERFAMILY SSF55608 112 212 5.19E-9 T 22-04-2016 IPR027434 Homing endonuclease GO:0004519 AMK43_RS09270 e802606ab25d02c06382cab890df7ef9 189 PIRSF PIRSF006806 1 187 3.4E-42 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMK43_RS09270 e802606ab25d02c06382cab890df7ef9 189 SUPERFAMILY SSF100950 1 188 1.67E-44 T 22-04-2016 AMK43_RS09270 e802606ab25d02c06382cab890df7ef9 189 PANTHER PTHR23407:SF1 1 188 5.7E-44 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMK43_RS09270 e802606ab25d02c06382cab890df7ef9 189 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 184 5.8E-32 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMK43_RS09270 e802606ab25d02c06382cab890df7ef9 189 PANTHER PTHR23407 1 188 5.7E-44 T 22-04-2016 AMK43_RS09270 e802606ab25d02c06382cab890df7ef9 189 Gene3D G3DSA:3.40.50.10420 1 188 1.0E-41 T 22-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain AMK43_RS09270 e802606ab25d02c06382cab890df7ef9 189 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 184 3.8E-40 T 22-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase AMK43_RS07365 3596a6bdbd657aa49e44eff8c7caa021 330 PRINTS PR01805 VacJ lipoprotein signature 192 209 5.4E-20 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 AMK43_RS07365 3596a6bdbd657aa49e44eff8c7caa021 330 PRINTS PR01805 VacJ lipoprotein signature 141 157 5.4E-20 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 AMK43_RS07365 3596a6bdbd657aa49e44eff8c7caa021 330 PRINTS PR01805 VacJ lipoprotein signature 124 137 5.4E-20 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 AMK43_RS07365 3596a6bdbd657aa49e44eff8c7caa021 330 PRINTS PR01805 VacJ lipoprotein signature 228 245 5.4E-20 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 AMK43_RS07365 3596a6bdbd657aa49e44eff8c7caa021 330 PANTHER PTHR30035 105 329 6.5E-51 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 AMK43_RS07365 3596a6bdbd657aa49e44eff8c7caa021 330 PANTHER PTHR30035 5 45 6.5E-51 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 AMK43_RS07365 3596a6bdbd657aa49e44eff8c7caa021 330 Pfam PF04333 MlaA lipoprotein 123 326 3.7E-59 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 AMK43_RS00435 f4453318732ad416578fb048e1a9a227 141 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00435 f4453318732ad416578fb048e1a9a227 141 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 37.697 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK43_RS00435 f4453318732ad416578fb048e1a9a227 141 Gene3D G3DSA:3.90.1170.10 22 136 2.3E-53 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00435 f4453318732ad416578fb048e1a9a227 141 PANTHER PTHR12220 1 137 2.4E-70 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK43_RS00435 f4453318732ad416578fb048e1a9a227 141 SUPERFAMILY SSF54686 1 137 1.83E-56 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00435 f4453318732ad416578fb048e1a9a227 141 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 22-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00435 f4453318732ad416578fb048e1a9a227 141 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 4.0E-57 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK43_RS00435 f4453318732ad416578fb048e1a9a227 141 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 4.9E-50 T 22-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00435 f4453318732ad416578fb048e1a9a227 141 PRINTS PR00060 Ribosomal protein L16 signature 24 36 3.6E-37 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK43_RS00435 f4453318732ad416578fb048e1a9a227 141 PRINTS PR00060 Ribosomal protein L16 signature 88 117 3.6E-37 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK43_RS00435 f4453318732ad416578fb048e1a9a227 141 PRINTS PR00060 Ribosomal protein L16 signature 42 53 3.6E-37 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK43_RS00435 f4453318732ad416578fb048e1a9a227 141 PRINTS PR00060 Ribosomal protein L16 signature 58 87 3.6E-37 T 22-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 AMK43_RS01390 64838db1c625734682434a0885e2a20a 436 Gene3D G3DSA:3.90.226.10 409 434 1.7E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS01390 64838db1c625734682434a0885e2a20a 436 Gene3D G3DSA:3.90.226.10 194 373 1.7E-70 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS01390 64838db1c625734682434a0885e2a20a 436 SUPERFAMILY SSF52096 203 376 3.64E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS01390 64838db1c625734682434a0885e2a20a 436 SUPERFAMILY SSF52096 53 129 3.64E-69 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS01390 64838db1c625734682434a0885e2a20a 436 Gene3D G3DSA:2.30.42.10 117 193 1.6E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS01390 64838db1c625734682434a0885e2a20a 436 SMART SM00228 110 182 1.3E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS01390 64838db1c625734682434a0885e2a20a 436 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 61 386 1.1E-105 T 22-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 AMK43_RS01390 64838db1c625734682434a0885e2a20a 436 Pfam PF13180 PDZ domain 111 188 7.7E-13 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS01390 64838db1c625734682434a0885e2a20a 436 PANTHER PTHR32060 50 390 1.5E-109 T 22-04-2016 AMK43_RS01390 64838db1c625734682434a0885e2a20a 436 SMART SM00245 184 371 2.2E-67 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 AMK43_RS01390 64838db1c625734682434a0885e2a20a 436 SUPERFAMILY SSF50156 105 194 1.93E-15 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS01390 64838db1c625734682434a0885e2a20a 436 Gene3D G3DSA:3.30.750.44 61 116 3.7E-8 T 22-04-2016 AMK43_RS01390 64838db1c625734682434a0885e2a20a 436 Pfam PF03572 Peptidase family S41 210 370 2.0E-54 T 22-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 1.1E-230 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 SUPERFAMILY SSF50447 205 301 1.51E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 Gene3D G3DSA:2.40.30.10 209 298 5.0E-36 T 22-04-2016 AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 9.5E-61 T 22-04-2016 AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 SUPERFAMILY SSF50465 299 393 3.45E-34 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 PANTHER PTHR23115:SF151 1 392 1.6E-250 T 22-04-2016 AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.488 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 Gene3D G3DSA:2.40.30.10 301 392 1.2E-44 T 22-04-2016 AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.6E-32 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 151 1.9E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.17E-26 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.17E-26 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.17E-26 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.17E-26 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.17E-26 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 PANTHER PTHR23115 1 392 1.6E-250 T 22-04-2016 AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 SUPERFAMILY SSF52540 9 226 6.17E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 Gene3D G3DSA:3.40.50.300 4 208 3.4E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08940 2b50e58567d43e5df281f588bd7a149f 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.9E-15 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 1.1E-230 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 SUPERFAMILY SSF50447 205 301 1.51E-28 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 Gene3D G3DSA:2.40.30.10 209 298 5.0E-36 T 22-04-2016 AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 9.5E-61 T 22-04-2016 AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 SUPERFAMILY SSF50465 299 393 3.45E-34 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 PANTHER PTHR23115:SF151 1 392 1.6E-250 T 22-04-2016 AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.488 T 22-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 Gene3D G3DSA:2.40.30.10 301 392 1.2E-44 T 22-04-2016 AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.6E-32 T 22-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 151 1.9E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 8.17E-26 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 8.17E-26 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 8.17E-26 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 8.17E-26 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 8.17E-26 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 PANTHER PTHR23115 1 392 1.6E-250 T 22-04-2016 AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 SUPERFAMILY SSF52540 9 226 6.17E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 Gene3D G3DSA:3.40.50.300 4 208 3.4E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00390 2b50e58567d43e5df281f588bd7a149f 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.9E-15 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK43_RS07695 b6c87b180ae2881805be66ec5083fa7b 554 Gene3D G3DSA:1.20.1560.10 16 316 3.2E-39 T 22-04-2016 AMK43_RS07695 b6c87b180ae2881805be66ec5083fa7b 554 Pfam PF00005 ABC transporter 361 504 4.0E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS07695 b6c87b180ae2881805be66ec5083fa7b 554 Gene3D G3DSA:3.40.50.300 340 551 5.1E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07695 b6c87b180ae2881805be66ec5083fa7b 554 PANTHER PTHR24221:SF138 7 549 1.3E-63 T 22-04-2016 AMK43_RS07695 b6c87b180ae2881805be66ec5083fa7b 554 SMART SM00382 368 550 1.5E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS07695 b6c87b180ae2881805be66ec5083fa7b 554 SUPERFAMILY SSF90123 16 319 1.31E-37 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS07695 b6c87b180ae2881805be66ec5083fa7b 554 Pfam PF00664 ABC transporter transmembrane region 22 281 1.1E-15 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS07695 b6c87b180ae2881805be66ec5083fa7b 554 PANTHER PTHR24221 7 549 1.3E-63 T 22-04-2016 AMK43_RS07695 b6c87b180ae2881805be66ec5083fa7b 554 SUPERFAMILY SSF52540 336 549 2.98E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07695 b6c87b180ae2881805be66ec5083fa7b 554 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 ProSitePatterns PS01008 DnaA protein signature. 406 425 - T 22-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 SMART SM00760 356 425 6.4E-33 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 244 271 1.3E-34 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 173 187 1.3E-34 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 406 425 1.3E-34 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 141 161 1.3E-34 T 22-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 PANTHER PTHR30050:SF2 4 448 4.2E-150 T 22-04-2016 AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 Pfam PF11638 DnaA N-terminal domain 7 66 3.1E-9 T 22-04-2016 IPR024633 DnaA N-terminal domain AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 PANTHER PTHR30050 4 448 4.2E-150 T 22-04-2016 AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 358 425 2.6E-26 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 Gene3D G3DSA:1.10.1750.10 349 447 2.7E-33 T 22-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 SMART SM00382 140 279 3.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 Gene3D G3DSA:1.10.8.60 280 348 3.4E-20 T 22-04-2016 AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 Pfam PF00308 Bacterial dnaA protein 108 329 1.2E-71 T 22-04-2016 IPR013317 Chromosomal replication initiator protein DnaA AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 SUPERFAMILY SSF52540 108 322 7.83E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 9 446 1.2E-137 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 SUPERFAMILY SSF48295 348 447 1.2E-28 T 22-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 6 447 27.231 T 22-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 AMK43_RS11440 f83db60a0aa92dfe94518dc92db38385 448 Gene3D G3DSA:3.40.50.300 95 276 1.6E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07135 dd3f5b3824ae9019d62643dd75ffc60a 289 SUPERFAMILY SSF55831 1 289 2.75E-94 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK43_RS07135 dd3f5b3824ae9019d62643dd75ffc60a 289 PRINTS PR00108 Thymidylate synthase family signature 142 161 2.7E-35 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK43_RS07135 dd3f5b3824ae9019d62643dd75ffc60a 289 PRINTS PR00108 Thymidylate synthase family signature 42 63 2.7E-35 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK43_RS07135 dd3f5b3824ae9019d62643dd75ffc60a 289 PRINTS PR00108 Thymidylate synthase family signature 168 183 2.7E-35 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK43_RS07135 dd3f5b3824ae9019d62643dd75ffc60a 289 PRINTS PR00108 Thymidylate synthase family signature 224 241 2.7E-35 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK43_RS07135 dd3f5b3824ae9019d62643dd75ffc60a 289 PRINTS PR00108 Thymidylate synthase family signature 186 212 2.7E-35 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK43_RS07135 dd3f5b3824ae9019d62643dd75ffc60a 289 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 289 1.6E-83 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK43_RS07135 dd3f5b3824ae9019d62643dd75ffc60a 289 Hamap MF_00008 Thymidylate synthase [thyA]. 1 289 34.809 T 22-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK43_RS07135 dd3f5b3824ae9019d62643dd75ffc60a 289 Gene3D G3DSA:3.30.572.10 1 289 3.4E-104 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK43_RS07135 dd3f5b3824ae9019d62643dd75ffc60a 289 Pfam PF00303 Thymidylate synthase 3 289 4.8E-100 T 22-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 AMK43_RS07135 dd3f5b3824ae9019d62643dd75ffc60a 289 PANTHER PTHR11548 1 100 1.2E-94 T 22-04-2016 AMK43_RS07135 dd3f5b3824ae9019d62643dd75ffc60a 289 PANTHER PTHR11548 125 289 1.2E-94 T 22-04-2016 AMK43_RS07150 fdc44a249b112090966c1ebf3a6d6f55 345 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 9.4E-72 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS07150 fdc44a249b112090966c1ebf3a6d6f55 345 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 31 180 7.3E-56 T 22-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 AMK43_RS07150 fdc44a249b112090966c1ebf3a6d6f55 345 PANTHER PTHR13767:SF2 10 228 2.3E-97 T 22-04-2016 AMK43_RS07150 fdc44a249b112090966c1ebf3a6d6f55 345 SUPERFAMILY SSF55120 9 225 1.93E-74 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS07150 fdc44a249b112090966c1ebf3a6d6f55 345 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 226 1.3E-10 T 22-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal AMK43_RS07150 fdc44a249b112090966c1ebf3a6d6f55 345 PANTHER PTHR13767 10 228 2.3E-97 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS07150 fdc44a249b112090966c1ebf3a6d6f55 345 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 9 344 16.91 T 22-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS06715 4d567259153ca49767d70c934c5fee19 258 Pfam PF00588 SpoU rRNA Methylase family 108 247 1.8E-34 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMK43_RS06715 4d567259153ca49767d70c934c5fee19 258 Gene3D G3DSA:3.40.1280.10 108 253 3.5E-40 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK43_RS06715 4d567259153ca49767d70c934c5fee19 258 PANTHER PTHR12029 1 254 2.5E-44 T 22-04-2016 AMK43_RS06715 4d567259153ca49767d70c934c5fee19 258 SUPERFAMILY SSF55315 4 94 4.71E-10 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like AMK43_RS06715 4d567259153ca49767d70c934c5fee19 258 SUPERFAMILY SSF75217 105 253 9.94E-40 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases AMK43_RS06715 4d567259153ca49767d70c934c5fee19 258 Gene3D G3DSA:3.30.1330.30 5 93 4.2E-13 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like AMK43_RS10730 4f6f1f4f506f1670c2267b1a07e6d828 278 Pfam PF00535 Glycosyl transferase family 2 6 197 2.4E-13 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK43_RS10730 4f6f1f4f506f1670c2267b1a07e6d828 278 PANTHER PTHR22916 8 150 3.5E-59 T 22-04-2016 AMK43_RS10730 4f6f1f4f506f1670c2267b1a07e6d828 278 PANTHER PTHR22916 175 263 3.5E-59 T 22-04-2016 AMK43_RS10730 4f6f1f4f506f1670c2267b1a07e6d828 278 SUPERFAMILY SSF53448 3 266 2.59E-41 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS10730 4f6f1f4f506f1670c2267b1a07e6d828 278 PANTHER PTHR22916:SF16 8 150 3.5E-59 T 22-04-2016 AMK43_RS10730 4f6f1f4f506f1670c2267b1a07e6d828 278 PANTHER PTHR22916:SF16 175 263 3.5E-59 T 22-04-2016 AMK43_RS10730 4f6f1f4f506f1670c2267b1a07e6d828 278 Gene3D G3DSA:3.90.550.10 5 271 1.1E-39 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11005 678ff1a00f61d862df9800c6c3195e76 505 Pfam PF00005 ABC transporter 18 169 8.8E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS11005 678ff1a00f61d862df9800c6c3195e76 505 Pfam PF00005 ABC transporter 288 430 2.1E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS11005 678ff1a00f61d862df9800c6c3195e76 505 PANTHER PTHR24220 3 366 1.3E-77 T 22-04-2016 AMK43_RS11005 678ff1a00f61d862df9800c6c3195e76 505 SMART SM00382 27 234 8.3E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS11005 678ff1a00f61d862df9800c6c3195e76 505 SMART SM00382 297 478 1.3E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS11005 678ff1a00f61d862df9800c6c3195e76 505 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS11005 678ff1a00f61d862df9800c6c3195e76 505 Gene3D G3DSA:3.40.50.300 1 228 4.6E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11005 678ff1a00f61d862df9800c6c3195e76 505 SUPERFAMILY SSF52540 2 229 9.58E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11005 678ff1a00f61d862df9800c6c3195e76 505 SUPERFAMILY SSF52540 283 487 7.03E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11005 678ff1a00f61d862df9800c6c3195e76 505 PANTHER PTHR24220:SF66 3 366 1.3E-77 T 22-04-2016 AMK43_RS11005 678ff1a00f61d862df9800c6c3195e76 505 Gene3D G3DSA:3.40.50.300 268 481 1.2E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05915 0b2f160db9653fc3b8727d4473547493 400 PANTHER PTHR11014:SF63 5 400 6.8E-138 T 22-04-2016 AMK43_RS05915 0b2f160db9653fc3b8727d4473547493 400 PANTHER PTHR11014 5 400 6.8E-138 T 22-04-2016 AMK43_RS05915 0b2f160db9653fc3b8727d4473547493 400 Pfam PF07687 Peptidase dimerisation domain 191 287 2.6E-11 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS05915 0b2f160db9653fc3b8727d4473547493 400 Pfam PF01546 Peptidase family M20/M25/M40 78 388 1.2E-28 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK43_RS05915 0b2f160db9653fc3b8727d4473547493 400 Gene3D G3DSA:3.40.630.10 2 189 2.7E-96 T 22-04-2016 AMK43_RS05915 0b2f160db9653fc3b8727d4473547493 400 Gene3D G3DSA:3.40.630.10 309 400 2.7E-96 T 22-04-2016 AMK43_RS05915 0b2f160db9653fc3b8727d4473547493 400 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 387 2.3E-106 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 AMK43_RS05915 0b2f160db9653fc3b8727d4473547493 400 PIRSF PIRSF005962 5 400 1.5E-122 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 AMK43_RS05915 0b2f160db9653fc3b8727d4473547493 400 SUPERFAMILY SSF55031 195 306 1.57E-26 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS05915 0b2f160db9653fc3b8727d4473547493 400 SUPERFAMILY SSF53187 9 208 1.49E-75 T 22-04-2016 AMK43_RS05915 0b2f160db9653fc3b8727d4473547493 400 SUPERFAMILY SSF53187 309 399 1.49E-75 T 22-04-2016 AMK43_RS05915 0b2f160db9653fc3b8727d4473547493 400 Gene3D G3DSA:3.30.70.360 194 308 1.6E-33 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 Gene3D G3DSA:3.20.20.120 128 433 2.7E-134 T 22-04-2016 IPR029065 Enolase C-terminal domain-like AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 SMART SM01192 139 431 2.2E-209 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 PIRSF PIRSF001400 1 431 6.9E-192 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 SMART SM01193 4 134 8.5E-103 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 SUPERFAMILY SSF51604 139 432 3.82E-123 T 22-04-2016 IPR029065 Enolase C-terminal domain-like AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 PANTHER PTHR11902 1 431 3.2E-261 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 ProSitePatterns PS00164 Enolase signature. 340 353 - T 22-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 Hamap MF_00318 Enolase [eno]. 2 417 44.965 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 SUPERFAMILY SSF54826 3 138 8.84E-61 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 Gene3D G3DSA:3.30.390.10 4 126 1.1E-59 T 22-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 Pfam PF03952 Enolase, N-terminal domain 4 134 1.7E-63 T 22-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 PRINTS PR00148 Enolase signature 340 354 1.5E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 PRINTS PR00148 Enolase signature 107 123 1.5E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 PRINTS PR00148 Enolase signature 161 174 1.5E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 PRINTS PR00148 Enolase signature 369 386 1.5E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 PRINTS PR00148 Enolase signature 317 328 1.5E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 PRINTS PR00148 Enolase signature 37 51 1.5E-47 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 430 2.2E-130 T 22-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK43_RS01505 ab12c5f2a196737ff2693c001494c61d 439 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 431 7.4E-209 T 22-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS01365 89cd9f9d57871a3b3c1c93e97e8e5ad4 679 SUPERFAMILY SSF56601 276 627 7.09E-87 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS01365 89cd9f9d57871a3b3c1c93e97e8e5ad4 679 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 261 4.8E-35 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMK43_RS01365 89cd9f9d57871a3b3c1c93e97e8e5ad4 679 Pfam PF00905 Penicillin binding protein transpeptidase domain 293 617 3.9E-60 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMK43_RS01365 89cd9f9d57871a3b3c1c93e97e8e5ad4 679 PANTHER PTHR30627:SF2 1 117 2.4E-172 T 22-04-2016 AMK43_RS01365 89cd9f9d57871a3b3c1c93e97e8e5ad4 679 PANTHER PTHR30627:SF2 139 661 2.4E-172 T 22-04-2016 AMK43_RS01365 89cd9f9d57871a3b3c1c93e97e8e5ad4 679 Gene3D G3DSA:3.90.1310.10 159 274 3.8E-30 T 22-04-2016 AMK43_RS01365 89cd9f9d57871a3b3c1c93e97e8e5ad4 679 Gene3D G3DSA:3.40.710.10 275 629 7.4E-94 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS01365 89cd9f9d57871a3b3c1c93e97e8e5ad4 679 PANTHER PTHR30627 1 117 2.4E-172 T 22-04-2016 AMK43_RS01365 89cd9f9d57871a3b3c1c93e97e8e5ad4 679 PANTHER PTHR30627 139 661 2.4E-172 T 22-04-2016 AMK43_RS01365 89cd9f9d57871a3b3c1c93e97e8e5ad4 679 SUPERFAMILY SSF56519 48 110 9.81E-38 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMK43_RS01365 89cd9f9d57871a3b3c1c93e97e8e5ad4 679 SUPERFAMILY SSF56519 158 275 9.81E-38 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMK43_RS01365 89cd9f9d57871a3b3c1c93e97e8e5ad4 679 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 12 623 2.2E-161 T 22-04-2016 IPR017790 Penicillin-binding protein 2 GO:0016020 UniPathway: UPA00219 AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 PANTHER PTHR11615 3 577 1.7E-157 T 22-04-2016 AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 SMART SM00902 522 581 4.8E-24 T 22-04-2016 IPR003149 Iron hydrogenase, small subunit AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 SUPERFAMILY SSF54292 1 79 5.35E-16 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 Gene3D G3DSA:3.40.50.1780 202 251 4.8E-70 T 22-04-2016 AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 Gene3D G3DSA:3.40.50.1780 309 439 4.8E-70 T 22-04-2016 AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 1 81 4.9E-21 T 22-04-2016 AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 TIGRFAM TIGR02512 FeFe_hydrog_A: [FeFe] hydrogenase, group A 143 520 4.4E-157 T 22-04-2016 IPR013352 Iron hydrogenase, subset GO:0005506|GO:0008901|GO:0051536|GO:0055114 AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 Gene3D G3DSA:3.30.70.20 105 201 1.2E-12 T 22-04-2016 AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 SUPERFAMILY SSF54862 80 212 1.84E-35 T 22-04-2016 AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 SUPERFAMILY SSF53920 193 578 2.62E-124 T 22-04-2016 IPR009016 Iron hydrogenase AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 Gene3D G3DSA:4.10.260.20 524 582 1.3E-22 T 22-04-2016 IPR003149 Iron hydrogenase, small subunit AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 Pfam PF12838 4Fe-4S dicluster domain 149 207 1.1E-6 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 Pfam PF02906 Iron only hydrogenase large subunit, C-terminal domain 226 516 3.5E-91 T 22-04-2016 IPR004108 Iron hydrogenase, large subunit, C-terminal AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 PANTHER PTHR11615:SF112 3 577 1.7E-157 T 22-04-2016 AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 SMART SM00929 88 128 7.9E-19 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 126 3.1E-18 T 22-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 Pfam PF02256 Iron hydrogenase small subunit 526 579 1.9E-21 T 22-04-2016 IPR003149 Iron hydrogenase, small subunit AMK43_RS00690 bd791a24b51cc108705d0ac520879cb3 583 Gene3D G3DSA:3.10.20.30 2 60 1.5E-6 T 22-04-2016 IPR012675 Beta-grasp domain AMK43_RS01485 896a6f5dd8715af217910fb784a5a4c6 175 Pfam PF13673 Acetyltransferase (GNAT) domain 52 162 2.1E-10 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS01485 896a6f5dd8715af217910fb784a5a4c6 175 SUPERFAMILY SSF55729 79 173 1.41E-17 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS01485 896a6f5dd8715af217910fb784a5a4c6 175 PANTHER PTHR23091 78 171 2.9E-13 T 22-04-2016 AMK43_RS01485 896a6f5dd8715af217910fb784a5a4c6 175 Gene3D G3DSA:3.40.630.30 77 172 6.9E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS05905 0f8d3235a5bf46547acbaf17535f1996 208 Pfam PF13338 Transcriptional regulator, AbiEi antitoxin 27 96 5.6E-15 T 22-04-2016 IPR025159 Transcriptional regulator, AbiEi antitoxin AMK43_RS03735 0d26be02845805f17679f2b7016e4b31 369 PANTHER PTHR34387:SF1 4 104 5.7E-13 T 22-04-2016 AMK43_RS03735 0d26be02845805f17679f2b7016e4b31 369 PANTHER PTHR34387:SF1 214 299 5.7E-13 T 22-04-2016 AMK43_RS03735 0d26be02845805f17679f2b7016e4b31 369 PANTHER PTHR34387 4 104 5.7E-13 T 22-04-2016 AMK43_RS03735 0d26be02845805f17679f2b7016e4b31 369 PANTHER PTHR34387 214 299 5.7E-13 T 22-04-2016 AMK43_RS03735 0d26be02845805f17679f2b7016e4b31 369 Pfam PF04402 Protein of unknown function (DUF541) 159 323 2.8E-16 T 22-04-2016 IPR007497 Protein of unknown function DUF541 AMK43_RS03735 0d26be02845805f17679f2b7016e4b31 369 Pfam PF04402 Protein of unknown function (DUF541) 25 141 4.1E-15 T 22-04-2016 IPR007497 Protein of unknown function DUF541 AMK43_RS10005 76062cddc5edf374885b5e64c6f8f7e0 396 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 5 391 8.8E-137 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AMK43_RS10005 76062cddc5edf374885b5e64c6f8f7e0 396 PANTHER PTHR11751 4 388 9.4E-121 T 22-04-2016 AMK43_RS10005 76062cddc5edf374885b5e64c6f8f7e0 396 SUPERFAMILY SSF53383 1 393 7.15E-89 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS10005 76062cddc5edf374885b5e64c6f8f7e0 396 Pfam PF00155 Aminotransferase class I and II 31 386 1.1E-35 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK43_RS10005 76062cddc5edf374885b5e64c6f8f7e0 396 PANTHER PTHR11751:SF422 4 388 9.4E-121 T 22-04-2016 AMK43_RS10005 76062cddc5edf374885b5e64c6f8f7e0 396 Gene3D G3DSA:3.40.640.10 45 239 1.7E-45 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS10005 76062cddc5edf374885b5e64c6f8f7e0 396 Gene3D G3DSA:3.90.1150.10 240 390 1.6E-50 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS04875 e530df5a9494c68a0376a2cdc5a4e5f7 189 Gene3D G3DSA:2.30.30.330 43 184 1.2E-16 T 22-04-2016 AMK43_RS04875 e530df5a9494c68a0376a2cdc5a4e5f7 189 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 61 155 2.3E-10 T 22-04-2016 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family AMK43_RS04875 e530df5a9494c68a0376a2cdc5a4e5f7 189 SUPERFAMILY SSF54001 44 186 6.38E-22 T 22-04-2016 AMK43_RS03820 2900420ba14da2b2a66bfde9c1fd9366 278 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 21 277 7.6E-127 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK43_RS03820 2900420ba14da2b2a66bfde9c1fd9366 278 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 17 278 53.143 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK43_RS03820 2900420ba14da2b2a66bfde9c1fd9366 278 PANTHER PTHR21057 1 278 1.0E-161 T 22-04-2016 AMK43_RS03820 2900420ba14da2b2a66bfde9c1fd9366 278 SUPERFAMILY SSF51569 10 277 4.3E-109 T 22-04-2016 AMK43_RS03820 2900420ba14da2b2a66bfde9c1fd9366 278 PANTHER PTHR21057:SF2 1 278 1.0E-161 T 22-04-2016 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK43_RS03820 2900420ba14da2b2a66bfde9c1fd9366 278 Gene3D G3DSA:3.20.20.70 21 277 3.9E-118 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS03820 2900420ba14da2b2a66bfde9c1fd9366 278 Pfam PF00793 DAHP synthetase I family 13 276 1.1E-76 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK43_RS08855 c970ad2ba3e72bd35446b41d99f1faa6 513 Pfam PF01676 Metalloenzyme superfamily 5 501 1.9E-67 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AMK43_RS08855 c970ad2ba3e72bd35446b41d99f1faa6 513 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 511 4.4E-206 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK43_RS08855 c970ad2ba3e72bd35446b41d99f1faa6 513 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 512 48.42 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK43_RS08855 c970ad2ba3e72bd35446b41d99f1faa6 513 Gene3D G3DSA:3.40.1450.10 80 309 1.9E-96 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK43_RS08855 c970ad2ba3e72bd35446b41d99f1faa6 513 PANTHER PTHR31637 3 513 2.0E-256 T 22-04-2016 AMK43_RS08855 c970ad2ba3e72bd35446b41d99f1faa6 513 SUPERFAMILY SSF64158 80 308 1.14E-85 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK43_RS08855 c970ad2ba3e72bd35446b41d99f1faa6 513 PIRSF PIRSF001492 1 513 5.9E-198 T 22-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK43_RS08855 c970ad2ba3e72bd35446b41d99f1faa6 513 PANTHER PTHR31637:SF0 3 513 2.0E-256 T 22-04-2016 AMK43_RS08855 c970ad2ba3e72bd35446b41d99f1faa6 513 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 298 1.3E-84 T 22-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 AMK43_RS08855 c970ad2ba3e72bd35446b41d99f1faa6 513 Gene3D G3DSA:3.40.720.10 313 511 2.4E-76 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK43_RS08855 c970ad2ba3e72bd35446b41d99f1faa6 513 Gene3D G3DSA:3.40.720.10 4 79 2.4E-76 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK43_RS08855 c970ad2ba3e72bd35446b41d99f1faa6 513 SUPERFAMILY SSF53649 309 510 3.27E-64 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMK43_RS08855 c970ad2ba3e72bd35446b41d99f1faa6 513 SUPERFAMILY SSF53649 4 78 3.27E-64 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMK43_RS04730 0fd9d67feaac15f5b5364d1e2d41aa2c 448 PANTHER PTHR11119 11 442 2.0E-69 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMK43_RS04730 0fd9d67feaac15f5b5364d1e2d41aa2c 448 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 358 378 - T 22-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 AMK43_RS04730 0fd9d67feaac15f5b5364d1e2d41aa2c 448 Pfam PF00860 Permease family 26 410 4.7E-71 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMK43_RS11250 8bc9ab01eaee23094e3afd1d73823018 334 PANTHER PTHR30040:SF2 8 198 2.2E-55 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 AMK43_RS11250 8bc9ab01eaee23094e3afd1d73823018 334 PANTHER PTHR30040:SF2 221 327 2.2E-55 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 AMK43_RS11250 8bc9ab01eaee23094e3afd1d73823018 334 SUPERFAMILY SSF143631 9 330 1.05E-53 T 22-04-2016 IPR003374 ApbE-like domain AMK43_RS11250 8bc9ab01eaee23094e3afd1d73823018 334 PIRSF PIRSF006268 2 333 1.1E-57 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 AMK43_RS11250 8bc9ab01eaee23094e3afd1d73823018 334 PANTHER PTHR30040 8 198 2.2E-55 T 22-04-2016 AMK43_RS11250 8bc9ab01eaee23094e3afd1d73823018 334 PANTHER PTHR30040 221 327 2.2E-55 T 22-04-2016 AMK43_RS11250 8bc9ab01eaee23094e3afd1d73823018 334 Pfam PF02424 ApbE family 14 307 1.4E-47 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 AMK43_RS08025 638959356ca01af71493fbb210c26729 309 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 221 308 1.4E-24 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK43_RS08025 638959356ca01af71493fbb210c26729 309 Gene3D G3DSA:3.40.47.10 1 146 1.2E-30 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS08025 638959356ca01af71493fbb210c26729 309 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 90 163 1.5E-18 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK43_RS08025 638959356ca01af71493fbb210c26729 309 SUPERFAMILY SSF53901 8 309 6.57E-46 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS08025 638959356ca01af71493fbb210c26729 309 PANTHER PTHR18919:SF109 23 309 1.5E-90 T 22-04-2016 AMK43_RS08025 638959356ca01af71493fbb210c26729 309 PANTHER PTHR18919 23 309 1.5E-90 T 22-04-2016 AMK43_RS08025 638959356ca01af71493fbb210c26729 309 Gene3D G3DSA:3.40.47.10 147 309 4.8E-35 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS01840 7d131efba80718ca4203b8cfbae85440 424 Gene3D G3DSA:1.20.1600.10 23 413 3.5E-68 T 22-04-2016 AMK43_RS01840 7d131efba80718ca4203b8cfbae85440 424 PANTHER PTHR30026 8 419 1.0E-51 T 22-04-2016 AMK43_RS01840 7d131efba80718ca4203b8cfbae85440 424 SUPERFAMILY SSF56954 8 416 1.57E-72 T 22-04-2016 AMK43_RS01840 7d131efba80718ca4203b8cfbae85440 424 Pfam PF02321 Outer membrane efflux protein 27 213 1.3E-27 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMK43_RS01840 7d131efba80718ca4203b8cfbae85440 424 Pfam PF02321 Outer membrane efflux protein 244 413 1.8E-25 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMK43_RS07075 c1de5c4d0a5a2cf0d1ab3482c6c72b16 259 SUPERFAMILY SSF56300 1 253 4.93E-86 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS07075 c1de5c4d0a5a2cf0d1ab3482c6c72b16 259 Pfam PF13277 YmdB-like protein 4 252 3.9E-106 T 22-04-2016 IPR005235 Metallophosphoesterase, YmdB-like AMK43_RS07075 c1de5c4d0a5a2cf0d1ab3482c6c72b16 259 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 257 1.2E-94 T 22-04-2016 IPR005235 Metallophosphoesterase, YmdB-like AMK43_RS07075 c1de5c4d0a5a2cf0d1ab3482c6c72b16 259 PANTHER PTHR36303 2 258 4.5E-129 T 22-04-2016 AMK43_RS07075 c1de5c4d0a5a2cf0d1ab3482c6c72b16 259 PIRSF PIRSF004789 1 259 2.7E-97 T 22-04-2016 IPR005235 Metallophosphoesterase, YmdB-like AMK43_RS07075 c1de5c4d0a5a2cf0d1ab3482c6c72b16 259 PANTHER PTHR36303:SF1 2 258 4.5E-129 T 22-04-2016 AMK43_RS07075 c1de5c4d0a5a2cf0d1ab3482c6c72b16 259 Gene3D G3DSA:3.60.21.30 1 257 2.0E-111 T 22-04-2016 AMK43_RS08265 d119722f72caac004a02fedf0b89edd4 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 62 4.7E-21 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK43_RS08265 d119722f72caac004a02fedf0b89edd4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK43_RS08265 d119722f72caac004a02fedf0b89edd4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK43_RS08265 d119722f72caac004a02fedf0b89edd4 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.2E-10 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK43_RS08265 d119722f72caac004a02fedf0b89edd4 295 PANTHER PTHR30126 1 294 1.7E-54 T 22-04-2016 AMK43_RS08265 d119722f72caac004a02fedf0b89edd4 295 Gene3D G3DSA:1.10.10.10 6 81 8.2E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS08265 d119722f72caac004a02fedf0b89edd4 295 Gene3D G3DSA:3.40.190.10 190 259 4.1E-6 T 22-04-2016 AMK43_RS08265 d119722f72caac004a02fedf0b89edd4 295 SUPERFAMILY SSF53850 92 292 6.21E-19 T 22-04-2016 AMK43_RS08265 d119722f72caac004a02fedf0b89edd4 295 Pfam PF03466 LysR substrate binding domain 91 274 6.5E-20 T 22-04-2016 IPR005119 LysR, substrate-binding AMK43_RS08265 d119722f72caac004a02fedf0b89edd4 295 Gene3D G3DSA:3.40.190.10 91 189 1.5E-13 T 22-04-2016 AMK43_RS08265 d119722f72caac004a02fedf0b89edd4 295 SUPERFAMILY SSF46785 5 106 1.75E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03255 b5c0416a5a9e2b4839b1fb006b6c6cd9 253 SUPERFAMILY SSF52317 124 217 1.03E-5 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS03255 b5c0416a5a9e2b4839b1fb006b6c6cd9 253 SUPERFAMILY SSF52317 33 99 1.03E-5 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS03255 b5c0416a5a9e2b4839b1fb006b6c6cd9 253 PIRSF PIRSF016642 1 242 1.8E-35 T 22-04-2016 IPR015834 Uncharacterised conserved protein UCP016642 AMK43_RS03255 b5c0416a5a9e2b4839b1fb006b6c6cd9 253 PANTHER PTHR12835 1 210 1.6E-36 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 AMK43_RS03255 b5c0416a5a9e2b4839b1fb006b6c6cd9 253 Gene3D G3DSA:3.40.50.880 44 220 3.2E-9 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS03255 b5c0416a5a9e2b4839b1fb006b6c6cd9 253 SUPERFAMILY SSF52317 40 119 3.44E-11 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS03255 b5c0416a5a9e2b4839b1fb006b6c6cd9 253 PANTHER PTHR12835:SF7 1 210 1.6E-36 T 22-04-2016 IPR015834 Uncharacterised conserved protein UCP016642 AMK43_RS03255 b5c0416a5a9e2b4839b1fb006b6c6cd9 253 Pfam PF09825 Biotin-protein ligase, N terminal 4 235 3.3E-48 T 22-04-2016 IPR019197 Biotin-protein ligase, N-terminal AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 Pfam PF05746 DALR anticodon binding domain 456 576 2.3E-28 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 SUPERFAMILY SSF52374 111 450 1.65E-88 T 22-04-2016 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 124 135 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 Pfam PF00750 tRNA synthetases class I (R) 112 442 8.4E-105 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 Hamap MF_00123 Arginine--tRNA ligase [argS]. 10 576 25.742 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 SUPERFAMILY SSF55190 8 102 4.32E-23 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 89 1.3E-24 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 Gene3D G3DSA:3.40.50.620 113 449 2.2E-109 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 SMART SM00836 456 576 7.3E-34 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 SMART SM01016 6 89 6.4E-27 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 PANTHER PTHR11956 1 576 3.0E-223 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 SUPERFAMILY SSF47323 450 576 1.35E-31 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 116 131 1.3E-24 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 155 168 1.3E-24 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 131 147 1.3E-24 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 PRINTS PR01038 Arginyl-tRNA synthetase signature 300 321 1.3E-24 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 Gene3D G3DSA:3.30.1360.70 5 103 2.6E-29 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 Gene3D G3DSA:1.10.730.10 450 576 2.8E-32 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS09385 331a22c0fc5269417e75355409bdb373 576 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 576 2.0E-156 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS07310 0fd1564cbaff300a5829456163b7b792 506 PANTHER PTHR24220:SF239 7 384 1.4E-168 T 22-04-2016 AMK43_RS07310 0fd1564cbaff300a5829456163b7b792 506 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS07310 0fd1564cbaff300a5829456163b7b792 506 SUPERFAMILY SSF52540 4 230 4.28E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07310 0fd1564cbaff300a5829456163b7b792 506 Gene3D G3DSA:3.40.50.300 2 239 5.0E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07310 0fd1564cbaff300a5829456163b7b792 506 Gene3D G3DSA:3.40.50.300 258 497 1.1E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07310 0fd1564cbaff300a5829456163b7b792 506 Pfam PF00005 ABC transporter 24 173 9.0E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS07310 0fd1564cbaff300a5829456163b7b792 506 Pfam PF00005 ABC transporter 278 431 8.0E-15 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS07310 0fd1564cbaff300a5829456163b7b792 506 SUPERFAMILY SSF52540 260 490 9.8E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07310 0fd1564cbaff300a5829456163b7b792 506 SMART SM00382 32 221 1.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS07310 0fd1564cbaff300a5829456163b7b792 506 PANTHER PTHR24220 7 384 1.4E-168 T 22-04-2016 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 347 484 2.2E-22 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 SUPERFAMILY SSF52540 307 583 6.56E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 Gene3D G3DSA:3.30.230.10 585 767 3.7E-70 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 TIGRFAM TIGR00763 lon: endopeptidase La 6 767 5.1E-281 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 SUPERFAMILY SSF54211 591 767 6.07E-53 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 SMART SM00464 3 197 3.9E-39 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 SMART SM00382 343 490 5.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 591 607 9.9E-49 T 22-04-2016 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 351 370 9.9E-49 T 22-04-2016 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 699 718 9.9E-49 T 22-04-2016 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 722 740 9.9E-49 T 22-04-2016 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 669 688 9.9E-49 T 22-04-2016 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 PIRSF PIRSF001174 2 771 6.5E-301 T 22-04-2016 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 Hamap MF_01973 Lon protease [lon]. 4 768 63.824 T 22-04-2016 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 PANTHER PTHR10046:SF24 5 772 0.0 T 22-04-2016 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 565 767 3.2E-82 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 672 680 - T 22-04-2016 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 PANTHER PTHR10046 5 772 0.0 T 22-04-2016 IPR027065 Lon protease GO:0004176|GO:0004252|GO:0005524|GO:0030163 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 SUPERFAMILY SSF88697 11 196 1.57E-24 T 22-04-2016 IPR015947 PUA-like domain AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 Gene3D G3DSA:3.40.50.300 307 485 1.5E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 5 197 2.8E-27 T 22-04-2016 IPR003111 ATP-dependent protease La (LON), substrate-binding domain GO:0004176|GO:0006508 AMK43_RS04940 2b8d16291bee679614f015cedbb6f085 792 Gene3D G3DSA:1.10.8.60 488 579 6.6E-29 T 22-04-2016 AMK43_RS11240 77517d16a6198a0b4c653d89ecaea85b 365 PANTHER PTHR30578 1 314 1.2E-49 T 22-04-2016 AMK43_RS11240 77517d16a6198a0b4c653d89ecaea85b 365 Pfam PF03116 NQR2, RnfD, RnfE family 9 305 1.7E-74 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 AMK43_RS08465 a27c3acf3d64d9236d729b019ccb7970 171 SUPERFAMILY SSF52833 8 165 2.9E-40 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS08465 a27c3acf3d64d9236d729b019ccb7970 171 Pfam PF00578 AhpC/TSA family 25 147 5.4E-21 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMK43_RS08465 a27c3acf3d64d9236d729b019ccb7970 171 PANTHER PTHR10681:SF81 6 171 4.2E-49 T 22-04-2016 AMK43_RS08465 a27c3acf3d64d9236d729b019ccb7970 171 Hamap MF_00269 Probable thiol peroxidase [tpx]. 7 168 33.734 T 22-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 AMK43_RS08465 a27c3acf3d64d9236d729b019ccb7970 171 Gene3D G3DSA:3.40.30.10 8 170 1.3E-45 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS08465 a27c3acf3d64d9236d729b019ccb7970 171 PANTHER PTHR10681 6 171 4.2E-49 T 22-04-2016 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 Gene3D G3DSA:3.40.50.10190 636 708 5.3E-20 T 22-04-2016 IPR001357 BRCT domain AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 Gene3D G3DSA:1.10.150.20 546 627 2.7E-19 T 22-04-2016 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 SUPERFAMILY SSF50249 359 441 2.06E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 PANTHER PTHR23389:SF9 9 564 2.5E-177 T 22-04-2016 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 SUPERFAMILY SSF56091 36 357 1.08E-107 T 22-04-2016 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 46 707 2.9E-232 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 Gene3D G3DSA:2.40.50.140 361 432 3.7E-30 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 41 359 2.0E-111 T 22-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 160 189 - T 22-04-2016 IPR018239 NAD-dependent DNA ligase, active site AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 Hamap MF_01588 DNA ligase [ligA]. 40 711 48.026 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 SUPERFAMILY SSF47781 445 627 1.26E-49 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 PIRSF PIRSF001604 30 711 1.4E-243 T 22-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 SMART SM00532 38 488 7.7E-229 T 22-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 638 705 1.8E-9 T 22-04-2016 IPR001357 BRCT domain AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 Gene3D G3DSA:1.10.287.610 32 100 1.2E-17 T 22-04-2016 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 448 473 1.0E-7 T 22-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 SUPERFAMILY SSF52113 635 709 8.04E-16 T 22-04-2016 IPR001357 BRCT domain AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 SMART SM00292 637 711 1.0E-5 T 22-04-2016 IPR001357 BRCT domain AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 Pfam PF12826 Helix-hairpin-helix motif 553 614 6.4E-19 T 22-04-2016 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 Gene3D G3DSA:3.30.470.30 164 293 5.1E-49 T 22-04-2016 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 SMART SM00278 486 505 94.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 SMART SM00278 522 541 2.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 SMART SM00278 586 605 15.0 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 Gene3D G3DSA:1.10.150.20 476 545 4.2E-25 T 22-04-2016 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 363 439 7.3E-33 T 22-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 AMK43_RS06170 5e1424a33498de2d54468cd83f2467a6 712 PANTHER PTHR23389 9 564 2.5E-177 T 22-04-2016 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 SUPERFAMILY SSF81296 119 176 7.0E-8 T 22-04-2016 IPR014756 Immunoglobulin E-set AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 119 172 8.2E-7 T 22-04-2016 IPR032640 AMP-activated protein kinase, glycogen-binding domain AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 SUPERFAMILY SSF81296 207 334 1.99E-8 T 22-04-2016 IPR014756 Immunoglobulin E-set AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 Gene3D G3DSA:3.20.20.80 545 795 2.8E-98 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 Gene3D G3DSA:3.20.20.80 332 360 2.8E-98 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 Gene3D G3DSA:3.20.20.80 838 920 2.8E-98 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 Gene3D G3DSA:3.20.20.80 394 476 2.8E-98 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 Pfam PF00128 Alpha amylase, catalytic domain 425 475 1.2E-16 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 Pfam PF00128 Alpha amylase, catalytic domain 546 871 7.5E-33 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 SUPERFAMILY SSF51445 421 476 5.12E-69 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 SUPERFAMILY SSF51445 329 354 5.12E-69 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 SUPERFAMILY SSF51445 837 927 5.12E-69 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 SUPERFAMILY SSF51445 622 803 5.12E-69 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 SUPERFAMILY SSF51445 545 595 5.12E-69 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 PANTHER PTHR10357:SF10 303 354 3.3E-90 T 22-04-2016 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 PANTHER PTHR10357:SF10 544 1020 3.3E-90 T 22-04-2016 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 PANTHER PTHR10357:SF10 138 200 3.3E-90 T 22-04-2016 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 PANTHER PTHR10357:SF10 422 475 3.3E-90 T 22-04-2016 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 Gene3D G3DSA:2.60.40.10 201 331 1.2E-14 T 22-04-2016 IPR013783 Immunoglobulin-like fold AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 SUPERFAMILY SSF51011 931 1007 2.82E-8 T 22-04-2016 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 PANTHER PTHR10357 303 354 3.3E-90 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 PANTHER PTHR10357 544 1020 3.3E-90 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 PANTHER PTHR10357 138 200 3.3E-90 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 PANTHER PTHR10357 422 475 3.3E-90 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 Gene3D G3DSA:2.60.40.1180 927 1007 9.2E-16 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 SMART SM00642 340 918 4.3E-31 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK43_RS10690 97a723a64f7cd01731947fa0fa3b9c6e 1023 Pfam PF16657 Maltogenic Amylase, C-terminal domain 927 1002 1.8E-6 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal AMK43_RS00100 4498864bf19a9885fcbe545f266e0a0e 527 SUPERFAMILY SSF53795 211 526 5.72E-129 T 22-04-2016 AMK43_RS00100 4498864bf19a9885fcbe545f266e0a0e 527 PIRSF PIRSF006294 1 527 2.6E-231 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 AMK43_RS00100 4498864bf19a9885fcbe545f266e0a0e 527 Gene3D G3DSA:3.40.449.10 16 208 9.0E-73 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 AMK43_RS00100 4498864bf19a9885fcbe545f266e0a0e 527 PANTHER PTHR30031 12 527 1.1E-290 T 22-04-2016 AMK43_RS00100 4498864bf19a9885fcbe545f266e0a0e 527 Gene3D G3DSA:3.90.228.20 211 274 7.9E-115 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 AMK43_RS00100 4498864bf19a9885fcbe545f266e0a0e 527 Gene3D G3DSA:3.90.228.20 335 526 7.9E-115 T 22-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 AMK43_RS00100 4498864bf19a9885fcbe545f266e0a0e 527 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 526 6.1E-211 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 AMK43_RS00100 4498864bf19a9885fcbe545f266e0a0e 527 Pfam PF01293 Phosphoenolpyruvate carboxykinase 16 478 1.3E-214 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 AMK43_RS00100 4498864bf19a9885fcbe545f266e0a0e 527 PANTHER PTHR30031:SF0 12 527 1.1E-290 T 22-04-2016 AMK43_RS00100 4498864bf19a9885fcbe545f266e0a0e 527 SUPERFAMILY SSF68923 2 208 2.09E-74 T 22-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 AMK43_RS00100 4498864bf19a9885fcbe545f266e0a0e 527 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 10 527 54.567 T 22-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 AMK43_RS00100 4498864bf19a9885fcbe545f266e0a0e 527 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 249 264 - T 22-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 AMK43_RS03060 3debd22e8e91f4cd062e7210469f12c3 263 SUPERFAMILY SSF161098 5 258 4.02E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS03060 3debd22e8e91f4cd062e7210469f12c3 263 PANTHER PTHR30222:SF6 5 250 3.9E-64 T 22-04-2016 AMK43_RS03060 3debd22e8e91f4cd062e7210469f12c3 263 PANTHER PTHR30222 5 250 3.9E-64 T 22-04-2016 AMK43_RS03060 3debd22e8e91f4cd062e7210469f12c3 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 260 2.4E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS03060 3debd22e8e91f4cd062e7210469f12c3 263 Gene3D G3DSA:1.10.3720.10 4 260 4.2E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS06455 c46ccc8c915816e41db715a73b929068 305 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMK43_RS06455 c46ccc8c915816e41db715a73b929068 305 Pfam PF00294 pfkB family carbohydrate kinase 1 294 3.0E-59 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB AMK43_RS06455 c46ccc8c915816e41db715a73b929068 305 Gene3D G3DSA:3.40.1190.20 1 304 1.8E-85 T 22-04-2016 IPR029056 Ribokinase-like AMK43_RS06455 c46ccc8c915816e41db715a73b929068 305 PRINTS PR00990 Ribokinase signature 216 227 1.1E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 AMK43_RS06455 c46ccc8c915816e41db715a73b929068 305 PRINTS PR00990 Ribokinase signature 33 52 1.1E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 AMK43_RS06455 c46ccc8c915816e41db715a73b929068 305 PRINTS PR00990 Ribokinase signature 172 187 1.1E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 AMK43_RS06455 c46ccc8c915816e41db715a73b929068 305 PRINTS PR00990 Ribokinase signature 104 117 1.1E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 AMK43_RS06455 c46ccc8c915816e41db715a73b929068 305 PRINTS PR00990 Ribokinase signature 6 27 1.1E-29 T 22-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 AMK43_RS06455 c46ccc8c915816e41db715a73b929068 305 PANTHER PTHR10584:SF184 5 304 3.4E-88 T 22-04-2016 AMK43_RS06455 c46ccc8c915816e41db715a73b929068 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMK43_RS06455 c46ccc8c915816e41db715a73b929068 305 PANTHER PTHR10584 5 304 3.4E-88 T 22-04-2016 AMK43_RS06455 c46ccc8c915816e41db715a73b929068 305 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 300 1.4E-99 T 22-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 AMK43_RS06455 c46ccc8c915816e41db715a73b929068 305 SUPERFAMILY SSF53613 5 303 1.71E-74 T 22-04-2016 IPR029056 Ribokinase-like AMK43_RS03395 36f8e4a0666c193a2696a857abc2d9e0 232 PANTHER PTHR12029 1 231 4.0E-65 T 22-04-2016 AMK43_RS03395 36f8e4a0666c193a2696a857abc2d9e0 232 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 4 70 3.5E-9 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AMK43_RS03395 36f8e4a0666c193a2696a857abc2d9e0 232 SUPERFAMILY SSF75217 60 231 1.83E-45 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases AMK43_RS03395 36f8e4a0666c193a2696a857abc2d9e0 232 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 2 230 3.2E-64 T 22-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 AMK43_RS03395 36f8e4a0666c193a2696a857abc2d9e0 232 SMART SM00967 3 71 8.2E-8 T 22-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 AMK43_RS03395 36f8e4a0666c193a2696a857abc2d9e0 232 Pfam PF00588 SpoU rRNA Methylase family 88 227 2.8E-41 T 22-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 AMK43_RS03395 36f8e4a0666c193a2696a857abc2d9e0 232 Gene3D G3DSA:3.30.1330.30 2 54 3.4E-9 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like AMK43_RS03395 36f8e4a0666c193a2696a857abc2d9e0 232 SUPERFAMILY SSF55315 2 66 9.89E-9 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like AMK43_RS03395 36f8e4a0666c193a2696a857abc2d9e0 232 Gene3D G3DSA:3.40.1280.10 84 231 4.5E-50 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK43_RS10575 f3c86d4affcde905a4e801f414f73229 220 SUPERFAMILY SSF55469 7 216 6.67E-50 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 AMK43_RS10575 f3c86d4affcde905a4e801f414f73229 220 PANTHER PTHR23026 1 111 4.6E-63 T 22-04-2016 AMK43_RS10575 f3c86d4affcde905a4e801f414f73229 220 PANTHER PTHR23026 131 220 4.6E-63 T 22-04-2016 AMK43_RS10575 f3c86d4affcde905a4e801f414f73229 220 Pfam PF00881 Nitroreductase family 14 199 1.8E-24 T 22-04-2016 IPR029479 Nitroreductase AMK43_RS10575 f3c86d4affcde905a4e801f414f73229 220 Gene3D G3DSA:3.40.109.10 4 219 9.1E-72 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 AMK43_RS10575 f3c86d4affcde905a4e801f414f73229 220 PANTHER PTHR23026:SF101 1 111 4.6E-63 T 22-04-2016 AMK43_RS10575 f3c86d4affcde905a4e801f414f73229 220 PANTHER PTHR23026:SF101 131 220 4.6E-63 T 22-04-2016 AMK43_RS01125 005b5597c65597b3822fe9c71655071f 471 Pfam PF01458 Uncharacterized protein family (UPF0051) 217 442 4.4E-75 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AMK43_RS01125 005b5597c65597b3822fe9c71655071f 471 PANTHER PTHR30508 32 471 1.0E-212 T 22-04-2016 AMK43_RS01125 005b5597c65597b3822fe9c71655071f 471 SUPERFAMILY SSF101960 37 468 8.89E-137 T 22-04-2016 AMK43_RS01125 005b5597c65597b3822fe9c71655071f 471 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 17 462 6.1E-219 T 22-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 AMK43_RS01125 005b5597c65597b3822fe9c71655071f 471 PANTHER PTHR30508:SF1 32 471 1.0E-212 T 22-04-2016 AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 SMART SM00388 267 334 7.7E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 SUPERFAMILY SSF158472 214 264 1.57E-8 T 22-04-2016 AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 Pfam PF00672 HAMP domain 194 262 3.1E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 Gene3D G3DSA:1.10.287.130 257 319 3.3E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 Pfam PF00512 His Kinase A (phospho-acceptor) domain 268 332 2.2E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 378 488 6.8E-24 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 SMART SM00387 377 490 3.7E-33 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 PANTHER PTHR24423 207 488 8.9E-72 T 22-04-2016 AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 PANTHER PTHR24423 1 12 8.9E-72 T 22-04-2016 AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 SUPERFAMILY SSF55874 324 491 7.73E-40 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 Gene3D G3DSA:3.30.565.10 320 492 7.0E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 SUPERFAMILY SSF47384 250 332 3.73E-19 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 487 2.8E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 443 2.8E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 429 2.8E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 468 2.8E-18 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS03885 14e8807cfa1f6ad13c56beb6387cfdf7 506 SMART SM00304 213 266 1.0E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK43_RS00620 c4f757bc9a9a8be274d37612c695dd91 736 SUPERFAMILY SSF52540 223 272 1.15E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00620 c4f757bc9a9a8be274d37612c695dd91 736 SUPERFAMILY SSF52540 496 650 1.15E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00620 c4f757bc9a9a8be274d37612c695dd91 736 SMART SM00490 493 590 1.8E-10 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS00620 c4f757bc9a9a8be274d37612c695dd91 736 Gene3D G3DSA:3.40.50.300 203 385 1.4E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00620 c4f757bc9a9a8be274d37612c695dd91 736 SMART SM00487 199 395 3.4E-23 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK43_RS00620 c4f757bc9a9a8be274d37612c695dd91 736 TIGRFAM TIGR00595 priA: primosomal protein N' 223 733 2.1E-178 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMK43_RS00620 c4f757bc9a9a8be274d37612c695dd91 736 SUPERFAMILY SSF52540 128 380 2.88E-35 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00620 c4f757bc9a9a8be274d37612c695dd91 736 PANTHER PTHR30580 1 736 1.2E-216 T 22-04-2016 AMK43_RS00620 c4f757bc9a9a8be274d37612c695dd91 736 Pfam PF00271 Helicase conserved C-terminal domain 492 589 3.6E-8 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS00620 c4f757bc9a9a8be274d37612c695dd91 736 Hamap MF_00983 Probable primosomal protein N' [priA]. 5 735 21.893 T 22-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 AMK43_RS00620 c4f757bc9a9a8be274d37612c695dd91 736 Gene3D G3DSA:3.40.50.300 462 634 2.3E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00620 c4f757bc9a9a8be274d37612c695dd91 736 Pfam PF04851 Type III restriction enzyme, res subunit 204 363 6.2E-15 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMK43_RS11435 19592acddd0eab81e42df31573e367e2 72 Pfam PF13275 S4 domain 4 67 8.4E-29 T 22-04-2016 AMK43_RS11435 19592acddd0eab81e42df31573e367e2 72 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 4 62 8.6E-26 T 22-04-2016 IPR014330 RNA-binding S4-related,YaaA AMK43_RS11435 19592acddd0eab81e42df31573e367e2 72 PANTHER PTHR32319 5 67 5.1E-27 T 22-04-2016 AMK43_RS11435 19592acddd0eab81e42df31573e367e2 72 SUPERFAMILY SSF55174 3 68 6.15E-21 T 22-04-2016 AMK43_RS11435 19592acddd0eab81e42df31573e367e2 72 Gene3D G3DSA:3.10.290.10 2 67 3.4E-29 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS09990 a282a1bf9818a4116445de2ab3648539 470 PANTHER PTHR10353 1 466 1.0E-260 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK43_RS09990 a282a1bf9818a4116445de2ab3648539 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 434 446 3.5E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK43_RS09990 a282a1bf9818a4116445de2ab3648539 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 3.5E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK43_RS09990 a282a1bf9818a4116445de2ab3648539 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 293 307 3.5E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK43_RS09990 a282a1bf9818a4116445de2ab3648539 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 365 373 3.5E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK43_RS09990 a282a1bf9818a4116445de2ab3648539 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 3.5E-14 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK43_RS09990 a282a1bf9818a4116445de2ab3648539 470 Gene3D G3DSA:3.20.20.80 3 460 6.3E-131 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS09990 a282a1bf9818a4116445de2ab3648539 470 PANTHER PTHR10353:SF73 1 466 1.0E-260 T 22-04-2016 AMK43_RS09990 a282a1bf9818a4116445de2ab3648539 470 Pfam PF00232 Glycosyl hydrolase family 1 5 464 4.3E-113 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK43_RS09990 a282a1bf9818a4116445de2ab3648539 470 SUPERFAMILY SSF51445 3 459 4.93E-148 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS06410 f111c4b134bf3951b19e2a5d260591f8 500 Pfam PF11230 Protein of unknown function (DUF3029) 14 497 5.6E-224 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted AMK43_RS06410 f111c4b134bf3951b19e2a5d260591f8 500 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 3 497 1.1E-242 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted AMK43_RS06410 f111c4b134bf3951b19e2a5d260591f8 500 SUPERFAMILY SSF51998 14 473 6.71E-85 T 22-04-2016 AMK43_RS06410 f111c4b134bf3951b19e2a5d260591f8 500 Gene3D G3DSA:3.20.70.20 81 476 7.4E-30 T 22-04-2016 AMK43_RS06410 f111c4b134bf3951b19e2a5d260591f8 500 PIRSF PIRSF028991 1 500 3.7E-184 T 22-04-2016 IPR016905 Glycyl radical enzyme, HI0521, predicted AMK43_RS05065 292e82799a31750f1bdf39d20f7fc2e4 294 SUPERFAMILY SSF82689 175 276 3.53E-27 T 22-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 AMK43_RS05065 292e82799a31750f1bdf39d20f7fc2e4 294 Pfam PF00924 Mechanosensitive ion channel 65 266 3.2E-47 T 22-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 AMK43_RS05065 292e82799a31750f1bdf39d20f7fc2e4 294 PANTHER PTHR30221:SF7 11 277 2.7E-67 T 22-04-2016 AMK43_RS05065 292e82799a31750f1bdf39d20f7fc2e4 294 Gene3D G3DSA:3.30.70.100 176 264 7.5E-28 T 22-04-2016 AMK43_RS05065 292e82799a31750f1bdf39d20f7fc2e4 294 PANTHER PTHR30221 11 277 2.7E-67 T 22-04-2016 AMK43_RS05065 292e82799a31750f1bdf39d20f7fc2e4 294 SUPERFAMILY SSF50182 107 172 1.73E-15 T 22-04-2016 IPR010920 LSM domain AMK43_RS05065 292e82799a31750f1bdf39d20f7fc2e4 294 Gene3D G3DSA:2.30.30.60 122 170 2.4E-15 T 22-04-2016 AMK43_RS05065 292e82799a31750f1bdf39d20f7fc2e4 294 SUPERFAMILY SSF82861 21 105 1.96E-13 T 22-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 AMK43_RS07380 ae886c5ca653472f6a75008895131929 288 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 35 49 6.6E-9 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMK43_RS07380 ae886c5ca653472f6a75008895131929 288 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 195 207 6.6E-9 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMK43_RS07380 ae886c5ca653472f6a75008895131929 288 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 58 71 6.6E-9 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMK43_RS07380 ae886c5ca653472f6a75008895131929 288 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 6.6E-9 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMK43_RS07380 ae886c5ca653472f6a75008895131929 288 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 255 2.6E-22 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMK43_RS07380 ae886c5ca653472f6a75008895131929 288 SUPERFAMILY SSF53335 6 277 5.39E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07380 ae886c5ca653472f6a75008895131929 288 Gene3D G3DSA:3.40.50.150 2 69 1.8E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07380 ae886c5ca653472f6a75008895131929 288 Gene3D G3DSA:3.40.50.150 176 275 1.8E-33 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07380 ae886c5ca653472f6a75008895131929 288 PANTHER PTHR30481:SF2 3 285 1.7E-69 T 22-04-2016 AMK43_RS07380 ae886c5ca653472f6a75008895131929 288 PANTHER PTHR30481 3 285 1.7E-69 T 22-04-2016 AMK43_RS07380 ae886c5ca653472f6a75008895131929 288 PIRSF PIRSF000398 1 282 9.5E-49 T 22-04-2016 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 AMK43_RS08270 c44333208c24544a0b204f6cce0de35d 324 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 190 200 2.2E-28 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK43_RS08270 c44333208c24544a0b204f6cce0de35d 324 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 138 159 2.2E-28 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK43_RS08270 c44333208c24544a0b204f6cce0de35d 324 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 13 29 2.2E-28 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK43_RS08270 c44333208c24544a0b204f6cce0de35d 324 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 63 82 2.2E-28 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK43_RS08270 c44333208c24544a0b204f6cce0de35d 324 SUPERFAMILY SSF52374 2 319 4.33E-88 T 22-04-2016 AMK43_RS08270 c44333208c24544a0b204f6cce0de35d 324 PANTHER PTHR10055 2 323 3.8E-139 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK43_RS08270 c44333208c24544a0b204f6cce0de35d 324 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 319 1.4E-91 T 22-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 AMK43_RS08270 c44333208c24544a0b204f6cce0de35d 324 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 18 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS08270 c44333208c24544a0b204f6cce0de35d 324 Gene3D G3DSA:1.10.240.10 200 286 4.8E-30 T 22-04-2016 AMK43_RS08270 c44333208c24544a0b204f6cce0de35d 324 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 320 38.31 T 22-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 AMK43_RS08270 c44333208c24544a0b204f6cce0de35d 324 Gene3D G3DSA:3.40.50.620 2 199 8.6E-83 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS08270 c44333208c24544a0b204f6cce0de35d 324 Pfam PF00579 tRNA synthetases class I (W and Y) 2 271 5.6E-65 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS08270 c44333208c24544a0b204f6cce0de35d 324 PANTHER PTHR10055:SF10 2 323 3.8E-139 T 22-04-2016 AMK43_RS00580 b569bd1e77d5a138516d72c71ddd8ef1 410 Gene3D G3DSA:3.40.50.150 1 220 5.6E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS00580 b569bd1e77d5a138516d72c71ddd8ef1 410 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 5 399 9.6E-69 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMK43_RS00580 b569bd1e77d5a138516d72c71ddd8ef1 410 Pfam PF00145 C-5 cytosine-specific DNA methylase 4 399 1.9E-66 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS00580 b569bd1e77d5a138516d72c71ddd8ef1 410 SUPERFAMILY SSF53335 287 409 8.31E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS00580 b569bd1e77d5a138516d72c71ddd8ef1 410 SUPERFAMILY SSF53335 2 203 8.31E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS00580 b569bd1e77d5a138516d72c71ddd8ef1 410 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 85 97 - T 22-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 AMK43_RS00580 b569bd1e77d5a138516d72c71ddd8ef1 410 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 176 189 3.1E-11 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMK43_RS00580 b569bd1e77d5a138516d72c71ddd8ef1 410 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 4 20 3.1E-11 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMK43_RS00580 b569bd1e77d5a138516d72c71ddd8ef1 410 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 127 141 3.1E-11 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMK43_RS00580 b569bd1e77d5a138516d72c71ddd8ef1 410 Gene3D G3DSA:3.90.120.10 272 391 2.9E-11 T 22-04-2016 AMK43_RS00580 b569bd1e77d5a138516d72c71ddd8ef1 410 PANTHER PTHR10629 2 25 4.9E-19 T 22-04-2016 AMK43_RS00580 b569bd1e77d5a138516d72c71ddd8ef1 410 PANTHER PTHR10629 47 191 4.9E-19 T 22-04-2016 AMK43_RS07570 f0a1513321679f30a2f2647c378327e3 417 SUPERFAMILY SSF53448 2 257 5.87E-81 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS07570 f0a1513321679f30a2f2647c378327e3 417 SUPERFAMILY SSF53448 303 319 5.87E-81 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS07570 f0a1513321679f30a2f2647c378327e3 417 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 187 197 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 AMK43_RS07570 f0a1513321679f30a2f2647c378327e3 417 PANTHER PTHR22572 4 396 1.1E-162 T 22-04-2016 AMK43_RS07570 f0a1513321679f30a2f2647c378327e3 417 Gene3D G3DSA:2.160.10.10 317 405 1.3E-8 T 22-04-2016 AMK43_RS07570 f0a1513321679f30a2f2647c378327e3 417 Pfam PF00483 Nucleotidyl transferase 5 254 8.9E-62 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMK43_RS07570 f0a1513321679f30a2f2647c378327e3 417 Gene3D G3DSA:3.90.550.10 2 316 2.4E-80 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS07570 f0a1513321679f30a2f2647c378327e3 417 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 384 42.983 T 22-04-2016 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 AMK43_RS07570 f0a1513321679f30a2f2647c378327e3 417 PANTHER PTHR22572:SF10 4 396 1.1E-162 T 22-04-2016 AMK43_RS07570 f0a1513321679f30a2f2647c378327e3 417 SUPERFAMILY SSF51161 220 405 9.43E-20 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK43_RS07570 f0a1513321679f30a2f2647c378327e3 417 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 22-04-2016 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 AMK43_RS07570 f0a1513321679f30a2f2647c378327e3 417 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 355 6.5E-130 T 22-04-2016 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|UniPathway: UPA00164 AMK43_RS05655 a5677dc80e434a1f80dd026a07b32ef8 332 Gene3D G3DSA:3.30.360.10 143 330 1.7E-60 T 22-04-2016 AMK43_RS05655 a5677dc80e434a1f80dd026a07b32ef8 332 SUPERFAMILY SSF51735 2 151 1.04E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS05655 a5677dc80e434a1f80dd026a07b32ef8 332 PANTHER PTHR22604 2 319 2.7E-106 T 22-04-2016 AMK43_RS05655 a5677dc80e434a1f80dd026a07b32ef8 332 PANTHER PTHR22604:SF76 2 319 2.7E-106 T 22-04-2016 AMK43_RS05655 a5677dc80e434a1f80dd026a07b32ef8 332 Gene3D G3DSA:3.40.50.720 2 142 1.2E-39 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS05655 a5677dc80e434a1f80dd026a07b32ef8 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 2.5E-21 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK43_RS05655 a5677dc80e434a1f80dd026a07b32ef8 332 SUPERFAMILY SSF55347 127 292 1.08E-23 T 22-04-2016 AMK43_RS05440 542c6bcf8d04edd8906623f21feaeca9 411 Gene3D G3DSA:3.40.47.10 261 410 3.9E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS05440 542c6bcf8d04edd8906623f21feaeca9 411 SUPERFAMILY SSF53901 1 249 3.76E-76 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS05440 542c6bcf8d04edd8906623f21feaeca9 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 9.1E-59 T 22-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal AMK43_RS05440 542c6bcf8d04edd8906623f21feaeca9 411 PIRSF PIRSF000447 1 411 1.6E-180 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 AMK43_RS05440 542c6bcf8d04edd8906623f21feaeca9 411 Gene3D G3DSA:3.40.47.10 2 255 4.3E-78 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS05440 542c6bcf8d04edd8906623f21feaeca9 411 PANTHER PTHR11712 1 410 1.3E-205 T 22-04-2016 AMK43_RS05440 542c6bcf8d04edd8906623f21feaeca9 411 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 22-04-2016 IPR018201 Beta-ketoacyl synthase, active site AMK43_RS05440 542c6bcf8d04edd8906623f21feaeca9 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 366 2.6E-36 T 22-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal AMK43_RS05440 542c6bcf8d04edd8906623f21feaeca9 411 SMART SM00825 Beta-ketoacyl synthase 4 400 1.4E-13 T 22-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain AMK43_RS05440 542c6bcf8d04edd8906623f21feaeca9 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 407 6.3E-192 T 22-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 AMK43_RS05440 542c6bcf8d04edd8906623f21feaeca9 411 SUPERFAMILY SSF53901 212 409 1.38E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 Gene3D G3DSA:3.30.300.20 282 352 1.4E-27 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 Pfam PF13184 NusA-like KH domain 234 302 4.7E-29 T 22-04-2016 IPR025249 KH domain, NusA-like GO:0003723 AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 Gene3D G3DSA:3.30.300.20 203 281 1.6E-33 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 Pfam PF08529 NusA N-terminal domain 9 128 1.7E-37 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 PANTHER PTHR22648:SF0 5 363 3.1E-124 T 22-04-2016 AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 Pfam PF00575 S1 RNA binding domain 138 196 4.0E-6 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 9 348 7.1E-120 T 22-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 SMART SM00316 137 204 8.2E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 PANTHER PTHR22648 5 363 3.1E-124 T 22-04-2016 AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 SUPERFAMILY SSF54814 206 282 6.54E-28 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 SUPERFAMILY SSF69705 9 130 3.14E-35 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 6 366 27.236 T 22-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 Gene3D G3DSA:2.40.50.140 141 202 7.3E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 Gene3D G3DSA:3.30.1480.10 9 128 5.3E-40 T 22-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 SUPERFAMILY SSF50249 138 203 1.06E-9 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS04900 51d8850815d624cf97bb074b955206e4 366 SUPERFAMILY SSF54814 284 347 6.28E-13 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMK43_RS07610 76fa2ae99b73a0d8922531569baf41f4 271 PANTHER PTHR21089:SF1 1 269 3.7E-69 T 22-04-2016 AMK43_RS07610 76fa2ae99b73a0d8922531569baf41f4 271 Gene3D G3DSA:3.40.50.720 105 264 2.3E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS07610 76fa2ae99b73a0d8922531569baf41f4 271 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 264 27.7 T 22-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS07610 76fa2ae99b73a0d8922531569baf41f4 271 SUPERFAMILY SSF51735 101 263 2.82E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS07610 76fa2ae99b73a0d8922531569baf41f4 271 SUPERFAMILY SSF53223 2 100 1.9E-26 T 22-04-2016 AMK43_RS07610 76fa2ae99b73a0d8922531569baf41f4 271 Gene3D G3DSA:3.40.192.10 1 104 5.1E-36 T 22-04-2016 AMK43_RS07610 76fa2ae99b73a0d8922531569baf41f4 271 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 266 1.1E-60 T 22-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS07610 76fa2ae99b73a0d8922531569baf41f4 271 PANTHER PTHR21089 1 269 3.7E-69 T 22-04-2016 AMK43_RS07610 76fa2ae99b73a0d8922531569baf41f4 271 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 4.7E-24 T 22-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS01500 0b6b7199b0a431ecd8435020cc8ce1b4 607 Pfam PF13624 SurA N-terminal domain 3 174 6.9E-13 T 22-04-2016 AMK43_RS01500 0b6b7199b0a431ecd8435020cc8ce1b4 607 Pfam PF13616 PPIC-type PPIASE domain 377 465 1.0E-20 T 22-04-2016 AMK43_RS01500 0b6b7199b0a431ecd8435020cc8ce1b4 607 SUPERFAMILY SSF54534 379 465 1.9E-20 T 22-04-2016 AMK43_RS01500 0b6b7199b0a431ecd8435020cc8ce1b4 607 Gene3D G3DSA:3.10.50.40 378 468 3.6E-24 T 22-04-2016 AMK43_RS01500 0b6b7199b0a431ecd8435020cc8ce1b4 607 Gene3D G3DSA:3.10.50.40 469 593 2.1E-4 T 22-04-2016 AMK43_RS01500 0b6b7199b0a431ecd8435020cc8ce1b4 607 PANTHER PTHR10657:SF11 1 180 7.4E-34 T 22-04-2016 AMK43_RS01500 0b6b7199b0a431ecd8435020cc8ce1b4 607 PANTHER PTHR10657:SF11 339 504 7.4E-34 T 22-04-2016 AMK43_RS01500 0b6b7199b0a431ecd8435020cc8ce1b4 607 PANTHER PTHR10657 1 180 7.4E-34 T 22-04-2016 AMK43_RS01500 0b6b7199b0a431ecd8435020cc8ce1b4 607 PANTHER PTHR10657 339 504 7.4E-34 T 22-04-2016 AMK43_RS01500 0b6b7199b0a431ecd8435020cc8ce1b4 607 SUPERFAMILY SSF109998 45 210 4.9E-22 T 22-04-2016 IPR027304 Trigger factor/SurA domain AMK43_RS00830 9377ed7c1b79d94488aecd68afee7ec7 447 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 250 435 2.3E-35 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 AMK43_RS00830 9377ed7c1b79d94488aecd68afee7ec7 447 PANTHER PTHR21343:SF6 253 446 3.2E-142 T 22-04-2016 AMK43_RS00830 9377ed7c1b79d94488aecd68afee7ec7 447 PANTHER PTHR21343:SF6 1 234 3.2E-142 T 22-04-2016 AMK43_RS00830 9377ed7c1b79d94488aecd68afee7ec7 447 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 1 437 39.366 T 22-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 AMK43_RS00830 9377ed7c1b79d94488aecd68afee7ec7 447 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 187 1.0E-16 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMK43_RS00830 9377ed7c1b79d94488aecd68afee7ec7 447 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 4 442 5.7E-125 T 22-04-2016 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 AMK43_RS00830 9377ed7c1b79d94488aecd68afee7ec7 447 Gene3D G3DSA:3.40.50.300 1 191 9.2E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00830 9377ed7c1b79d94488aecd68afee7ec7 447 Gene3D G3DSA:3.40.50.880 250 446 1.7E-20 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS00830 9377ed7c1b79d94488aecd68afee7ec7 447 PANTHER PTHR21343 253 446 3.2E-142 T 22-04-2016 AMK43_RS00830 9377ed7c1b79d94488aecd68afee7ec7 447 PANTHER PTHR21343 1 234 3.2E-142 T 22-04-2016 AMK43_RS00830 9377ed7c1b79d94488aecd68afee7ec7 447 SUPERFAMILY SSF52540 1 191 7.04E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00830 9377ed7c1b79d94488aecd68afee7ec7 447 SUPERFAMILY SSF52317 246 445 1.83E-25 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 5.1E-33 T 22-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 Gene3D G3DSA:3.30.470.20 190 326 8.6E-52 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 SMART SM01210 328 420 3.6E-40 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 Gene3D G3DSA:3.30.1490.20 120 189 3.0E-26 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 SUPERFAMILY SSF52440 1 101 5.18E-31 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 418 1.8E-161 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 288 295 - T 22-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 294 6.6E-73 T 22-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 Gene3D G3DSA:3.90.600.10 329 418 1.8E-31 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 SMART SM01209 101 294 7.9E-113 T 22-04-2016 AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 SUPERFAMILY SSF51246 327 417 6.28E-27 T 22-04-2016 IPR011054 Rudiment single hybrid motif AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 SUPERFAMILY SSF56059 102 323 5.39E-53 T 22-04-2016 AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 419 38.76 T 22-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 PANTHER PTHR10520 1 417 3.0E-218 T 22-04-2016 AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 418 1.9E-27 T 22-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK43_RS06510 d4a48e89235e350867b7b0fb2010af79 420 Gene3D G3DSA:3.40.50.20 2 92 6.8E-33 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 Pfam PF00122 E1-E2 ATPase 199 418 6.1E-71 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 Gene3D G3DSA:3.40.50.1000 398 441 3.4E-61 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 Gene3D G3DSA:3.40.50.1000 554 694 3.4E-61 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 SUPERFAMILY SSF55008 2 67 2.09E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PANTHER PTHR24093 5 728 6.6E-264 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 573 583 3.4E-29 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 645 3.4E-29 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 562 3.4E-29 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 277 291 3.4E-29 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 427 441 3.4E-29 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 649 661 3.4E-29 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 200 704 6.0E-97 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 Pfam PF00702 haloacid dehalogenase-like hydrolase 423 640 3.6E-43 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PRINTS PR00943 Copper-transporting ATPase signature 603 620 9.3E-20 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PRINTS PR00943 Copper-transporting ATPase signature 410 425 9.3E-20 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PRINTS PR00943 Copper-transporting ATPase signature 350 364 9.3E-20 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PRINTS PR00943 Copper-transporting ATPase signature 46 66 9.3E-20 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PRINTS PR00943 Copper-transporting ATPase signature 660 674 9.3E-20 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PRINTS PR00943 Copper-transporting ATPase signature 144 163 9.3E-20 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PRINTS PR00943 Copper-transporting ATPase signature 197 216 9.3E-20 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 PRINTS PR00943 Copper-transporting ATPase signature 124 142 9.3E-20 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 SUPERFAMILY SSF81653 230 327 4.45E-28 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 Pfam PF00403 Heavy-metal-associated domain 5 64 6.8E-14 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 Gene3D G3DSA:2.70.150.10 187 328 1.4E-34 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 159 736 3.2E-205 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 SUPERFAMILY SSF56784 425 445 1.71E-62 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 SUPERFAMILY SSF56784 484 734 1.71E-62 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 Gene3D G3DSA:3.40.1110.10 442 553 6.3E-28 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 429 435 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 140 737 4.3E-193 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 Gene3D G3DSA:3.30.70.100 1 66 4.1E-19 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 SUPERFAMILY SSF81665 328 421 1.83E-14 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 SUPERFAMILY SSF81665 182 231 1.83E-14 T 22-04-2016 AMK43_RS05280 fbc916d5ebd5838a88c98bdbf762f352 743 SUPERFAMILY SSF81665 675 724 1.83E-14 T 22-04-2016 AMK43_RS07305 b524cb28656b2903df1e0ca7b26a10d5 354 Pfam PF02653 Branched-chain amino acid transport system / permease component 58 338 8.6E-40 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK43_RS07305 b524cb28656b2903df1e0ca7b26a10d5 354 PANTHER PTHR32196 7 354 1.9E-88 T 22-04-2016 AMK43_RS07305 b524cb28656b2903df1e0ca7b26a10d5 354 PANTHER PTHR32196:SF30 7 354 1.9E-88 T 22-04-2016 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 ProSitePatterns PS00450 Aconitase family signature 1. 342 358 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 Gene3D G3DSA:3.40.1060.10 165 299 2.7E-34 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 Gene3D G3DSA:3.30.499.10 5 164 4.1E-27 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 Gene3D G3DSA:3.30.499.10 338 469 8.8E-59 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 PRINTS PR00415 Aconitase family signature 296 310 2.0E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 PRINTS PR00415 Aconitase family signature 205 218 2.0E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 PRINTS PR00415 Aconitase family signature 219 232 2.0E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 PRINTS PR00415 Aconitase family signature 92 105 2.0E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 PRINTS PR00415 Aconitase family signature 346 357 2.0E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 PRINTS PR00415 Aconitase family signature 129 142 2.0E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 PRINTS PR00415 Aconitase family signature 118 126 2.0E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 PRINTS PR00415 Aconitase family signature 402 415 2.0E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 PRINTS PR00415 Aconitase family signature 143 158 2.0E-44 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 SUPERFAMILY SSF53732 7 470 2.88E-164 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 10 469 57.01 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 Pfam PF00330 Aconitase family (aconitate hydratase) 16 460 1.6E-148 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 PANTHER PTHR11670:SF38 7 472 2.3E-236 T 22-04-2016 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 ProSitePatterns PS01244 Aconitase family signature 2. 402 415 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 11 468 1.4E-213 T 22-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08010 be4181f4b127d14892f049ec2f6b5458 472 PANTHER PTHR11670 7 472 2.3E-236 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS05415 cc82724743f707094d870bc0281a970a 66 Pfam PF01783 Ribosomal L32p protein family 2 55 5.1E-19 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 AMK43_RS05415 cc82724743f707094d870bc0281a970a 66 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 4.5E-18 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 AMK43_RS05415 cc82724743f707094d870bc0281a970a 66 SUPERFAMILY SSF57829 1 54 1.95E-16 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMK43_RS05415 cc82724743f707094d870bc0281a970a 66 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 17.102 T 22-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 AMK43_RS08220 d2c0af22125e4918eaf3f7be306f3050 208 Gene3D G3DSA:1.25.40.10 6 188 1.4E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS08220 d2c0af22125e4918eaf3f7be306f3050 208 SUPERFAMILY SSF48452 151 194 8.85E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS08220 d2c0af22125e4918eaf3f7be306f3050 208 SUPERFAMILY SSF48452 27 118 8.85E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS00015 2bedd70ef929fd14a2c06e1a0651c296 69 SMART SM01234 1 68 9.8E-40 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor AMK43_RS00015 2bedd70ef929fd14a2c06e1a0651c296 69 PANTHER PTHR33383 1 67 6.7E-34 T 22-04-2016 AMK43_RS00015 2bedd70ef929fd14a2c06e1a0651c296 69 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 22.736 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor AMK43_RS00015 2bedd70ef929fd14a2c06e1a0651c296 69 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 67 6.5E-27 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor AMK43_RS00015 2bedd70ef929fd14a2c06e1a0651c296 69 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 17 68 4.0E-16 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor AMK43_RS00015 2bedd70ef929fd14a2c06e1a0651c296 69 Pfam PF01809 Haemolytic domain 2 67 1.8E-28 T 22-04-2016 IPR002696 Putative membrane protein insertion efficiency factor AMK43_RS10020 62b4776b79ef648d199cd3eb530ee810 362 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 219 346 35.364 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK43_RS10020 62b4776b79ef648d199cd3eb530ee810 362 PANTHER PTHR10173:SF40 324 362 1.1E-95 T 22-04-2016 AMK43_RS10020 62b4776b79ef648d199cd3eb530ee810 362 PANTHER PTHR10173:SF40 50 195 1.1E-95 T 22-04-2016 AMK43_RS10020 62b4776b79ef648d199cd3eb530ee810 362 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 53 201 9.4E-52 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK43_RS10020 62b4776b79ef648d199cd3eb530ee810 362 SUPERFAMILY SSF55068 48 205 1.96E-62 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK43_RS10020 62b4776b79ef648d199cd3eb530ee810 362 Gene3D G3DSA:2.170.150.20 216 361 9.9E-61 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK43_RS10020 62b4776b79ef648d199cd3eb530ee810 362 SUPERFAMILY SSF51316 220 360 1.88E-59 T 22-04-2016 IPR011057 Mss4-like AMK43_RS10020 62b4776b79ef648d199cd3eb530ee810 362 Pfam PF01641 SelR domain 225 345 4.7E-49 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK43_RS10020 62b4776b79ef648d199cd3eb530ee810 362 Gene3D G3DSA:3.30.1060.10 33 202 7.3E-67 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK43_RS10020 62b4776b79ef648d199cd3eb530ee810 362 PANTHER PTHR10173 324 362 1.1E-95 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 AMK43_RS10020 62b4776b79ef648d199cd3eb530ee810 362 PANTHER PTHR10173 50 195 1.1E-95 T 22-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 AMK43_RS10020 62b4776b79ef648d199cd3eb530ee810 362 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 52 207 34.9 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK43_RS10020 62b4776b79ef648d199cd3eb530ee810 362 Pfam PF01625 Peptide methionine sulfoxide reductase 54 202 1.2E-57 T 22-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 AMK43_RS10020 62b4776b79ef648d199cd3eb530ee810 362 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 220 354 2.4E-67 T 22-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 78 98 2.1E-46 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 60 72 2.1E-46 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 3 26 2.1E-46 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 2.1E-46 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 130 146 2.1E-46 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 2 212 4.1E-81 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 SUPERFAMILY SSF53182 1 212 2.49E-72 T 22-04-2016 AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 Pfam PF01470 Pyroglutamyl peptidase 1 201 8.0E-87 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 PANTHER PTHR23402 1 212 1.7E-66 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 67 83 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 PIRSF PIRSF015592 1 211 4.4E-83 T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 PANTHER PTHR23402:SF1 1 212 1.7E-66 T 22-04-2016 AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 1 199 38.792 T 22-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 128 142 - T 22-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 AMK43_RS03325 1eba1e8319ba07c402708543a12caba4 213 Gene3D G3DSA:3.40.630.20 1 210 1.5E-72 T 22-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like AMK43_RS06745 8fb381a4912241a47afe282ec85ae879 264 SMART SM00650 18 190 1.4E-70 T 22-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 AMK43_RS06745 8fb381a4912241a47afe282ec85ae879 264 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 3 261 4.2E-73 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AMK43_RS06745 8fb381a4912241a47afe282ec85ae879 264 Gene3D G3DSA:1.10.8.100 199 263 7.5E-10 T 22-04-2016 IPR023165 rRNA adenine dimethylase-like AMK43_RS06745 8fb381a4912241a47afe282ec85ae879 264 SUPERFAMILY SSF53335 2 263 9.7E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS06745 8fb381a4912241a47afe282ec85ae879 264 PANTHER PTHR11727:SF7 2 264 4.9E-70 T 22-04-2016 AMK43_RS06745 8fb381a4912241a47afe282ec85ae879 264 PANTHER PTHR11727 2 264 4.9E-70 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMK43_RS06745 8fb381a4912241a47afe282ec85ae879 264 Gene3D G3DSA:3.40.50.150 2 188 4.6E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS06745 8fb381a4912241a47afe282ec85ae879 264 Pfam PF00398 Ribosomal RNA adenine dimethylase 2 263 6.5E-57 T 22-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm AMK43_RS06745 8fb381a4912241a47afe282ec85ae879 264 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 34 61 - T 22-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 AMK43_RS06745 8fb381a4912241a47afe282ec85ae879 264 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 2 263 46.179 T 22-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 AMK43_RS01640 01243ebaf9e491e9e8dc4fc50de714b8 253 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 11 253 29.409 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK43_RS01640 01243ebaf9e491e9e8dc4fc50de714b8 253 PANTHER PTHR10314:SF4 20 48 7.3E-17 T 22-04-2016 AMK43_RS01640 01243ebaf9e491e9e8dc4fc50de714b8 253 PANTHER PTHR10314:SF4 71 253 7.3E-17 T 22-04-2016 AMK43_RS01640 01243ebaf9e491e9e8dc4fc50de714b8 253 Pfam PF00290 Tryptophan synthase alpha chain 8 237 3.2E-72 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK43_RS01640 01243ebaf9e491e9e8dc4fc50de714b8 253 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 10 249 4.1E-67 T 22-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK43_RS01640 01243ebaf9e491e9e8dc4fc50de714b8 253 Gene3D G3DSA:3.20.20.70 4 248 7.6E-82 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS01640 01243ebaf9e491e9e8dc4fc50de714b8 253 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 45 58 - T 22-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK43_RS01640 01243ebaf9e491e9e8dc4fc50de714b8 253 PANTHER PTHR10314 20 48 7.3E-17 T 22-04-2016 AMK43_RS01640 01243ebaf9e491e9e8dc4fc50de714b8 253 PANTHER PTHR10314 71 253 7.3E-17 T 22-04-2016 AMK43_RS01640 01243ebaf9e491e9e8dc4fc50de714b8 253 SUPERFAMILY SSF51366 4 241 3.14E-73 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK43_RS04115 cc56b4a41d56eee26fb42c0236b2f0cc 261 PANTHER PTHR36832 1 261 1.0E-33 T 22-04-2016 AMK43_RS04115 cc56b4a41d56eee26fb42c0236b2f0cc 261 Pfam PF06182 ABC-2 family transporter protein 31 260 4.9E-17 T 22-04-2016 IPR010390 Protein of unknown function DUF990 AMK43_RS10555 8f889aec06cee1b75b35198f25187d97 311 Pfam PF02195 ParB-like nuclease domain 6 94 1.3E-21 T 22-04-2016 IPR003115 ParB/Sulfiredoxin AMK43_RS10555 8f889aec06cee1b75b35198f25187d97 311 SMART SM00470 4 94 4.2E-28 T 22-04-2016 IPR003115 ParB/Sulfiredoxin AMK43_RS10555 8f889aec06cee1b75b35198f25187d97 311 SUPERFAMILY SSF109709 87 196 2.09E-34 T 22-04-2016 AMK43_RS10555 8f889aec06cee1b75b35198f25187d97 311 PANTHER PTHR33375 3 197 2.5E-79 T 22-04-2016 AMK43_RS10555 8f889aec06cee1b75b35198f25187d97 311 PANTHER PTHR33375 237 309 2.5E-79 T 22-04-2016 AMK43_RS10555 8f889aec06cee1b75b35198f25187d97 311 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 5 180 5.6E-53 T 22-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 AMK43_RS10555 8f889aec06cee1b75b35198f25187d97 311 Gene3D G3DSA:3.90.1530.10 2 100 9.1E-34 T 22-04-2016 AMK43_RS10555 8f889aec06cee1b75b35198f25187d97 311 SUPERFAMILY SSF110849 2 131 2.62E-27 T 22-04-2016 IPR003115 ParB/Sulfiredoxin AMK43_RS06625 b432ac8218c7697a36df17b41dc09ca1 567 SUPERFAMILY SSF51445 8 479 9.55E-152 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS06625 b432ac8218c7697a36df17b41dc09ca1 567 Gene3D G3DSA:3.20.20.80 178 481 8.2E-125 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS06625 b432ac8218c7697a36df17b41dc09ca1 567 Gene3D G3DSA:3.20.20.80 6 108 8.2E-125 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS06625 b432ac8218c7697a36df17b41dc09ca1 567 Gene3D G3DSA:3.90.400.10 109 177 7.5E-27 T 22-04-2016 AMK43_RS06625 b432ac8218c7697a36df17b41dc09ca1 567 SMART SM00642 17 423 6.0E-154 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK43_RS06625 b432ac8218c7697a36df17b41dc09ca1 567 PANTHER PTHR10357:SF170 460 562 4.5E-279 T 22-04-2016 AMK43_RS06625 b432ac8218c7697a36df17b41dc09ca1 567 PANTHER PTHR10357:SF170 4 428 4.5E-279 T 22-04-2016 AMK43_RS06625 b432ac8218c7697a36df17b41dc09ca1 567 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 9 563 2.4E-259 T 22-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 AMK43_RS06625 b432ac8218c7697a36df17b41dc09ca1 567 Gene3D G3DSA:2.60.40.1180 486 563 5.7E-18 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta AMK43_RS06625 b432ac8218c7697a36df17b41dc09ca1 567 Pfam PF00128 Alpha amylase, catalytic domain 32 380 1.6E-123 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK43_RS06625 b432ac8218c7697a36df17b41dc09ca1 567 SUPERFAMILY SSF51011 484 563 2.66E-14 T 22-04-2016 AMK43_RS06625 b432ac8218c7697a36df17b41dc09ca1 567 PANTHER PTHR10357 460 562 4.5E-279 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK43_RS06625 b432ac8218c7697a36df17b41dc09ca1 567 PANTHER PTHR10357 4 428 4.5E-279 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK43_RS09130 ef4707f6337ff1b9bd6d6e907a86e9ae 1157 Gene3D G3DSA:1.10.150.280 837 882 9.5E-5 T 22-04-2016 AMK43_RS09130 ef4707f6337ff1b9bd6d6e907a86e9ae 1157 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 303 737 7.3E-166 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS09130 ef4707f6337ff1b9bd6d6e907a86e9ae 1157 PANTHER PTHR32294:SF0 316 1157 0.0 T 22-04-2016 AMK43_RS09130 ef4707f6337ff1b9bd6d6e907a86e9ae 1157 PANTHER PTHR32294:SF0 1 299 0.0 T 22-04-2016 AMK43_RS09130 ef4707f6337ff1b9bd6d6e907a86e9ae 1157 Pfam PF14579 Helix-hairpin-helix motif 811 897 8.9E-22 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS09130 ef4707f6337ff1b9bd6d6e907a86e9ae 1157 PANTHER PTHR32294 316 1157 0.0 T 22-04-2016 AMK43_RS09130 ef4707f6337ff1b9bd6d6e907a86e9ae 1157 PANTHER PTHR32294 1 299 0.0 T 22-04-2016 AMK43_RS09130 ef4707f6337ff1b9bd6d6e907a86e9ae 1157 Gene3D G3DSA:3.20.20.140 6 243 3.3E-25 T 22-04-2016 AMK43_RS09130 ef4707f6337ff1b9bd6d6e907a86e9ae 1157 Pfam PF02811 PHP domain 7 167 5.9E-39 T 22-04-2016 IPR004013 PHP domain GO:0003824 AMK43_RS09130 ef4707f6337ff1b9bd6d6e907a86e9ae 1157 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 7 1035 0.0 T 22-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS09130 ef4707f6337ff1b9bd6d6e907a86e9ae 1157 Gene3D G3DSA:2.40.50.140 993 1081 3.6E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS09130 ef4707f6337ff1b9bd6d6e907a86e9ae 1157 SMART SM00481 6 72 1.1E-20 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AMK43_RS09130 ef4707f6337ff1b9bd6d6e907a86e9ae 1157 SUPERFAMILY SSF89550 6 248 2.75E-16 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 AMK43_RS03970 07a6363a3e84970a7523efde3415ad1d 173 Pfam PF04205 FMN-binding domain 90 164 2.3E-16 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 AMK43_RS03970 07a6363a3e84970a7523efde3415ad1d 173 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 10 168 6.8E-30 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AMK43_RS03970 07a6363a3e84970a7523efde3415ad1d 173 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 1 169 19.31 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AMK43_RS03970 07a6363a3e84970a7523efde3415ad1d 173 SMART SM00900 90 167 4.8E-18 T 22-04-2016 IPR007329 FMN-binding GO:0010181|GO:0016020 AMK43_RS03970 07a6363a3e84970a7523efde3415ad1d 173 PIRSF PIRSF006091 1 173 3.8E-30 T 22-04-2016 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 AMK43_RS03970 07a6363a3e84970a7523efde3415ad1d 173 PANTHER PTHR36118:SF1 1 171 1.3E-26 T 22-04-2016 AMK43_RS03970 07a6363a3e84970a7523efde3415ad1d 173 PANTHER PTHR36118 1 171 1.3E-26 T 22-04-2016 AMK43_RS01410 2979d60c948df9c371bd1b0121a98263 340 Pfam PF00534 Glycosyl transferases group 1 150 313 5.6E-13 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 AMK43_RS01410 2979d60c948df9c371bd1b0121a98263 340 PANTHER PTHR12526 43 336 1.3E-33 T 22-04-2016 AMK43_RS01410 2979d60c948df9c371bd1b0121a98263 340 SUPERFAMILY SSF53756 12 336 1.52E-51 T 22-04-2016 AMK43_RS01410 2979d60c948df9c371bd1b0121a98263 340 Gene3D G3DSA:3.40.50.2000 125 313 5.2E-11 T 22-04-2016 AMK43_RS01410 2979d60c948df9c371bd1b0121a98263 340 Pfam PF13439 Glycosyltransferase Family 4 41 140 3.1E-17 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK43_RS02335 3b2c811d94ef3e5dff421a46306b3222 140 Gene3D G3DSA:2.40.50.140 90 138 5.4E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS02335 3b2c811d94ef3e5dff421a46306b3222 140 SUPERFAMILY SSF141322 77 139 1.7E-6 T 22-04-2016 AMK43_RS02335 3b2c811d94ef3e5dff421a46306b3222 140 Pfam PF01957 NfeD-like C-terminal, partner-binding 6 139 9.2E-17 T 22-04-2016 IPR002810 NfeD-like, C-terminal domain AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 182 414 1.6E-73 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 SMART SM00839 184 414 1.9E-97 T 22-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 101 114 - T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 SUPERFAMILY SSF53223 5 184 6.4E-67 T 22-04-2016 AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 PIRSF PIRSF000185 3 416 3.6E-163 T 22-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 Gene3D G3DSA:3.40.50.720 182 416 4.6E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 36 163 2.1E-55 T 22-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 PANTHER PTHR11606 4 416 7.4E-181 T 22-04-2016 AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 342 353 2.8E-34 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 215 235 2.8E-34 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 173 195 2.8E-34 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 93 107 2.8E-34 T 22-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 Gene3D G3DSA:3.40.192.10 38 179 9.7E-58 T 22-04-2016 AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 SUPERFAMILY SSF51735 182 416 5.0E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS06825 b25a65e211d8af9e9101f31ba84cccfe 416 PANTHER PTHR11606:SF16 4 416 7.4E-181 T 22-04-2016 AMK43_RS08120 54f9ab0e88855b59a2825316fc9de6a3 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 173 192 2.4E-7 T 22-04-2016 AMK43_RS08120 54f9ab0e88855b59a2825316fc9de6a3 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 193 213 2.4E-7 T 22-04-2016 AMK43_RS08120 54f9ab0e88855b59a2825316fc9de6a3 215 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 155 172 2.4E-7 T 22-04-2016 AMK43_RS08120 54f9ab0e88855b59a2825316fc9de6a3 215 PANTHER PTHR30128 30 214 1.1E-52 T 22-04-2016 AMK43_RS08120 54f9ab0e88855b59a2825316fc9de6a3 215 SUPERFAMILY SSF103088 98 210 3.53E-38 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS08120 54f9ab0e88855b59a2825316fc9de6a3 215 PRINTS PR01021 OMPA domain signature 140 155 4.7E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS08120 54f9ab0e88855b59a2825316fc9de6a3 215 PRINTS PR01021 OMPA domain signature 110 132 4.7E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS08120 54f9ab0e88855b59a2825316fc9de6a3 215 PRINTS PR01021 OMPA domain signature 155 171 4.7E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS08120 54f9ab0e88855b59a2825316fc9de6a3 215 Pfam PF00691 OmpA family 109 204 3.8E-25 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS08120 54f9ab0e88855b59a2825316fc9de6a3 215 Gene3D G3DSA:3.30.1330.60 99 211 1.9E-42 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS08120 54f9ab0e88855b59a2825316fc9de6a3 215 Pfam PF13488 Glycine zipper 33 78 4.1E-10 T 22-04-2016 AMK43_RS07240 0c364c292aa44649056631f8129d472c 213 SUPERFAMILY SSF55811 24 203 9.75E-26 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK43_RS07240 0c364c292aa44649056631f8129d472c 213 Pfam PF00293 NUDIX domain 77 185 2.2E-7 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK43_RS07240 0c364c292aa44649056631f8129d472c 213 PANTHER PTHR22769:SF32 15 206 5.5E-38 T 22-04-2016 AMK43_RS07240 0c364c292aa44649056631f8129d472c 213 PANTHER PTHR22769 15 206 5.5E-38 T 22-04-2016 AMK43_RS07240 0c364c292aa44649056631f8129d472c 213 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 6 60 1.5E-27 T 22-04-2016 AMK43_RS07240 0c364c292aa44649056631f8129d472c 213 Gene3D G3DSA:3.90.79.10 55 202 3.0E-22 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 22-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 SUPERFAMILY SSF55347 151 314 1.99E-64 T 22-04-2016 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 151 6.7E-59 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 2.3E-62 T 22-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 Gene3D G3DSA:3.40.50.720 1 159 1.5E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 SUPERFAMILY SSF51735 3 167 3.1E-63 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 PANTHER PTHR10836 1 333 1.7E-227 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 4.7E-33 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 266 281 4.7E-33 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 4.7E-33 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 4.7E-33 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 4.7E-33 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 PANTHER PTHR10836:SF57 1 333 1.7E-227 T 22-04-2016 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 Gene3D G3DSA:3.30.360.10 160 315 1.8E-67 T 22-04-2016 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 SMART SM00846 3 151 3.2E-92 T 22-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 8.1E-135 T 22-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS00235 e7f341fd247fad7e47c5f48d098a51ee 335 PIRSF PIRSF000149 1 335 8.0E-122 T 22-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 SUPERFAMILY SSF158472 174 222 9.15E-8 T 22-04-2016 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 Gene3D G3DSA:1.10.287.130 215 276 4.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 SMART SM00304 170 224 1.5E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 SMART SM00388 225 291 1.8E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 445 4.3E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 PANTHER PTHR24423 106 129 6.1E-81 T 22-04-2016 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 PANTHER PTHR24423 3 8 6.1E-81 T 22-04-2016 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 PANTHER PTHR24423 69 90 6.1E-81 T 22-04-2016 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 PANTHER PTHR24423 164 451 6.1E-81 T 22-04-2016 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 Gene3D G3DSA:3.30.565.10 277 448 2.6E-45 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 SUPERFAMILY SSF47384 208 291 1.96E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 SMART SM00387 336 446 3.2E-32 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 Pfam PF00672 HAMP domain 151 220 3.4E-13 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 SUPERFAMILY SSF55874 281 445 2.49E-44 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 1.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 401 1.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 443 1.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 373 387 1.2E-14 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS09845 ac47ba67f5746a1ebce8a3ba9c9c5e0d 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 227 291 2.2E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS01080 7e6ce41603893dfc0e11b3a7d2d4acbf 255 PANTHER PTHR30363 1 255 9.1E-51 T 22-04-2016 AMK43_RS01080 7e6ce41603893dfc0e11b3a7d2d4acbf 255 SUPERFAMILY SSF46785 4 78 6.0E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS01080 7e6ce41603893dfc0e11b3a7d2d4acbf 255 PANTHER PTHR30363:SF1 1 255 9.1E-51 T 22-04-2016 AMK43_RS01080 7e6ce41603893dfc0e11b3a7d2d4acbf 255 SMART SM01134 73 238 6.3E-38 T 22-04-2016 AMK43_RS01080 7e6ce41603893dfc0e11b3a7d2d4acbf 255 Gene3D G3DSA:1.10.10.10 4 55 1.2E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS01080 7e6ce41603893dfc0e11b3a7d2d4acbf 255 Gene3D G3DSA:3.40.50.1360 77 218 6.6E-5 T 22-04-2016 AMK43_RS01080 7e6ce41603893dfc0e11b3a7d2d4acbf 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.0E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK43_RS01080 7e6ce41603893dfc0e11b3a7d2d4acbf 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.0E-6 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK43_RS01080 7e6ce41603893dfc0e11b3a7d2d4acbf 255 SMART SM00420 6 58 3.4E-18 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK43_RS01080 7e6ce41603893dfc0e11b3a7d2d4acbf 255 SUPERFAMILY SSF100950 74 237 4.71E-20 T 22-04-2016 AMK43_RS01080 7e6ce41603893dfc0e11b3a7d2d4acbf 255 Pfam PF00455 DeoR C terminal sensor domain 75 236 1.6E-32 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain AMK43_RS01080 7e6ce41603893dfc0e11b3a7d2d4acbf 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 1.1E-16 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 Gene3D G3DSA:1.10.8.60 338 422 1.9E-35 T 22-04-2016 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 5 850 0.0 T 22-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 Gene3D G3DSA:1.10.1780.10 1 144 4.7E-36 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 289 301 - T 22-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 761 840 1.9E-24 T 22-04-2016 IPR019489 Clp ATPase, C-terminal AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 SMART SM00382 594 762 3.4E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 SMART SM00382 193 338 1.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 Pfam PF07724 AAA domain (Cdc48 subfamily) 593 755 1.0E-51 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 SUPERFAMILY SSF52540 543 845 5.57E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 Gene3D G3DSA:3.40.50.300 154 337 6.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 66 1.6E-10 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 140 9.1E-6 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 SMART SM01086 761 850 6.1E-29 T 22-04-2016 IPR019489 Clp ATPase, C-terminal AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 Gene3D G3DSA:3.40.50.300 547 772 3.9E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 628 646 - T 22-04-2016 IPR028299 ClpA/B, conserved site 2 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 PANTHER PTHR11638 1 854 0.0 T 22-04-2016 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 SUPERFAMILY SSF81923 3 151 3.53E-34 T 22-04-2016 IPR004176 Clp, N-terminal GO:0019538 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 198 314 2.1E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 705 719 2.3E-41 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 616 2.3E-41 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 672 690 2.3E-41 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 643 661 2.3E-41 T 22-04-2016 IPR001270 ClpA/B family GO:0005524 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 PANTHER PTHR11638:SF18 1 854 0.0 T 22-04-2016 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 Gene3D G3DSA:1.10.8.60 773 852 9.9E-28 T 22-04-2016 AMK43_RS01780 7e73caa9eb3febd5e5bd9985031dc2a7 854 SUPERFAMILY SSF52540 152 542 1.02E-101 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07585 af1df64299b795beef716c95f341b738 146 Pfam PF01220 Dehydroquinase class II 3 140 3.8E-54 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK43_RS07585 af1df64299b795beef716c95f341b738 146 SUPERFAMILY SSF52304 3 145 3.92E-55 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK43_RS07585 af1df64299b795beef716c95f341b738 146 Gene3D G3DSA:3.40.50.9100 2 145 4.5E-57 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK43_RS07585 af1df64299b795beef716c95f341b738 146 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 22-04-2016 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK43_RS07585 af1df64299b795beef716c95f341b738 146 PANTHER PTHR21272 1 146 4.4E-70 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK43_RS07585 af1df64299b795beef716c95f341b738 146 PIRSF PIRSF001399 1 146 9.1E-56 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK43_RS07585 af1df64299b795beef716c95f341b738 146 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 146 55.365 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK43_RS07585 af1df64299b795beef716c95f341b738 146 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 142 5.0E-45 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK43_RS07585 af1df64299b795beef716c95f341b738 146 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 143 2.7E-53 T 22-04-2016 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 PRINTS PR00395 Ribosomal protein S2 signature 6 24 5.2E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 PRINTS PR00395 Ribosomal protein S2 signature 87 104 5.2E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 PRINTS PR00395 Ribosomal protein S2 signature 159 176 5.2E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 PRINTS PR00395 Ribosomal protein S2 signature 176 187 5.2E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 PRINTS PR00395 Ribosomal protein S2 signature 37 46 5.2E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 PRINTS PR00395 Ribosomal protein S2 signature 197 211 5.2E-36 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 PANTHER PTHR12534 1 225 7.6E-114 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 22-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 SUPERFAMILY SSF52313 6 238 4.97E-90 T 22-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 Gene3D G3DSA:3.40.50.10490 159 244 2.8E-65 T 22-04-2016 AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 Gene3D G3DSA:3.40.50.10490 23 99 2.8E-65 T 22-04-2016 AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 226 42.011 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 Pfam PF00318 Ribosomal protein S2 9 225 1.3E-96 T 22-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 Gene3D G3DSA:1.10.287.610 100 153 4.3E-20 T 22-04-2016 AMK43_RS08920 1d71f28316c1f290cd2107304b9064cc 263 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.6E-100 T 22-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 AMK43_RS05930 37a278701a20312d65a5957174377126 329 SUPERFAMILY SSF53822 48 238 8.07E-11 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK43_RS05930 37a278701a20312d65a5957174377126 329 PANTHER PTHR34296 20 327 3.0E-66 T 22-04-2016 AMK43_RS05930 37a278701a20312d65a5957174377126 329 PANTHER PTHR34296:SF2 20 327 3.0E-66 T 22-04-2016 AMK43_RS05930 37a278701a20312d65a5957174377126 329 Gene3D G3DSA:3.40.50.2300 135 294 4.7E-38 T 22-04-2016 AMK43_RS05930 37a278701a20312d65a5957174377126 329 Pfam PF02608 Basic membrane protein 39 327 3.9E-45 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 AMK43_RS06165 65cfecb69cdb680543b2a9646892275c 264 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 20 260 2.4E-88 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMK43_RS06165 65cfecb69cdb680543b2a9646892275c 264 PANTHER PTHR23264:SF19 8 264 2.6E-111 T 22-04-2016 AMK43_RS06165 65cfecb69cdb680543b2a9646892275c 264 SUPERFAMILY SSF52540 14 243 1.18E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06165 65cfecb69cdb680543b2a9646892275c 264 PANTHER PTHR23264 8 264 2.6E-111 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMK43_RS06165 65cfecb69cdb680543b2a9646892275c 264 ProSitePatterns PS01215 Mrp family signature. 125 141 - T 22-04-2016 IPR000808 Mrp, conserved site GO:0005524 AMK43_RS06165 65cfecb69cdb680543b2a9646892275c 264 Gene3D G3DSA:3.40.50.300 10 258 2.4E-89 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06165 65cfecb69cdb680543b2a9646892275c 264 Hamap MF_02040 Iron-sulfur cluster carrier protein. 16 261 34.565 T 22-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein AMK43_RS00140 0b71f490ff616321fc3a3d1c523719b1 271 SUPERFAMILY SSF53098 102 262 8.65E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS00140 0b71f490ff616321fc3a3d1c523719b1 271 Pfam PF00665 Integrase core domain 106 220 2.4E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 AMK43_RS00140 0b71f490ff616321fc3a3d1c523719b1 271 PANTHER PTHR32552 1 264 3.9E-83 T 22-04-2016 AMK43_RS00140 0b71f490ff616321fc3a3d1c523719b1 271 Pfam PF13276 HTH-like domain 28 82 2.7E-19 T 22-04-2016 IPR025948 HTH-like domain AMK43_RS00140 0b71f490ff616321fc3a3d1c523719b1 271 Gene3D G3DSA:3.30.420.10 101 261 5.8E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS01310 0b71f490ff616321fc3a3d1c523719b1 271 SUPERFAMILY SSF53098 102 262 8.65E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS01310 0b71f490ff616321fc3a3d1c523719b1 271 Pfam PF00665 Integrase core domain 106 220 2.4E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 AMK43_RS01310 0b71f490ff616321fc3a3d1c523719b1 271 PANTHER PTHR32552 1 264 3.9E-83 T 22-04-2016 AMK43_RS01310 0b71f490ff616321fc3a3d1c523719b1 271 Pfam PF13276 HTH-like domain 28 82 2.7E-19 T 22-04-2016 IPR025948 HTH-like domain AMK43_RS01310 0b71f490ff616321fc3a3d1c523719b1 271 Gene3D G3DSA:3.30.420.10 101 261 5.8E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS05535 0b71f490ff616321fc3a3d1c523719b1 271 SUPERFAMILY SSF53098 102 262 8.65E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS05535 0b71f490ff616321fc3a3d1c523719b1 271 Pfam PF00665 Integrase core domain 106 220 2.4E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 AMK43_RS05535 0b71f490ff616321fc3a3d1c523719b1 271 PANTHER PTHR32552 1 264 3.9E-83 T 22-04-2016 AMK43_RS05535 0b71f490ff616321fc3a3d1c523719b1 271 Pfam PF13276 HTH-like domain 28 82 2.7E-19 T 22-04-2016 IPR025948 HTH-like domain AMK43_RS05535 0b71f490ff616321fc3a3d1c523719b1 271 Gene3D G3DSA:3.30.420.10 101 261 5.8E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS10370 0b71f490ff616321fc3a3d1c523719b1 271 SUPERFAMILY SSF53098 102 262 8.65E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS10370 0b71f490ff616321fc3a3d1c523719b1 271 Pfam PF00665 Integrase core domain 106 220 2.4E-23 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 AMK43_RS10370 0b71f490ff616321fc3a3d1c523719b1 271 PANTHER PTHR32552 1 264 3.9E-83 T 22-04-2016 AMK43_RS10370 0b71f490ff616321fc3a3d1c523719b1 271 Pfam PF13276 HTH-like domain 28 82 2.7E-19 T 22-04-2016 IPR025948 HTH-like domain AMK43_RS10370 0b71f490ff616321fc3a3d1c523719b1 271 Gene3D G3DSA:3.30.420.10 101 261 5.8E-27 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS07950 32cef811500289e720e900048a386eca 876 SUPERFAMILY SSF52540 566 798 2.66E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07950 32cef811500289e720e900048a386eca 876 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 4 869 2.6E-287 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 SUPERFAMILY SSF55271 3 111 7.72E-42 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 PANTHER PTHR11361 2 875 0.0 T 22-04-2016 AMK43_RS07950 32cef811500289e720e900048a386eca 876 SMART SM00534 607 794 7.7E-114 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 Pfam PF05192 MutS domain III 272 558 5.3E-36 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 Pfam PF01624 MutS domain I 4 114 2.1E-45 T 22-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 Gene3D G3DSA:3.40.1170.10 3 114 4.5E-49 T 22-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 SUPERFAMILY SSF53150 110 265 1.83E-28 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 Gene3D G3DSA:3.30.420.110 122 250 3.3E-24 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 Gene3D G3DSA:1.10.1420.10 268 467 4.3E-47 T 22-04-2016 AMK43_RS07950 32cef811500289e720e900048a386eca 876 SMART SM00533 286 590 9.2E-90 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 Gene3D G3DSA:3.40.50.300 566 798 1.1E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07950 32cef811500289e720e900048a386eca 876 Pfam PF05190 MutS family domain IV 427 516 7.4E-28 T 22-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 3 864 24.284 T 22-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 Pfam PF00488 MutS domain V 611 797 8.2E-84 T 22-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 PANTHER PTHR11361:SF86 2 875 0.0 T 22-04-2016 AMK43_RS07950 32cef811500289e720e900048a386eca 876 Pfam PF05188 MutS domain II 124 251 7.1E-18 T 22-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 SUPERFAMILY SSF48334 270 564 1.19E-80 T 22-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 AMK43_RS07950 32cef811500289e720e900048a386eca 876 PIRSF PIRSF037677 1 855 1.4E-170 T 22-04-2016 AMK43_RS09895 a94d75b3bd0234a067fd599e877534e3 311 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 307 5.2E-92 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK43_RS09895 a94d75b3bd0234a067fd599e877534e3 311 SUPERFAMILY SSF50486 203 309 1.13E-24 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AMK43_RS09895 a94d75b3bd0234a067fd599e877534e3 311 Gene3D G3DSA:3.10.25.10 205 310 7.8E-28 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK43_RS09895 a94d75b3bd0234a067fd599e877534e3 311 Gene3D G3DSA:3.40.50.170 2 203 6.1E-64 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK43_RS09895 a94d75b3bd0234a067fd599e877534e3 311 PANTHER PTHR11138 4 311 3.7E-97 T 22-04-2016 AMK43_RS09895 a94d75b3bd0234a067fd599e877534e3 311 Pfam PF02911 Formyl transferase, C-terminal domain 203 301 3.3E-23 T 22-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK43_RS09895 a94d75b3bd0234a067fd599e877534e3 311 SUPERFAMILY SSF53328 2 199 1.96E-59 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK43_RS09895 a94d75b3bd0234a067fd599e877534e3 311 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 304 32.553 T 22-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK43_RS09895 a94d75b3bd0234a067fd599e877534e3 311 Pfam PF00551 Formyl transferase 23 178 1.3E-41 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK43_RS09455 9929b04d829f5d3c4f5caa8f95dd8a3f 464 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 1 455 1.4E-171 T 22-04-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: REACT_18266 AMK43_RS09455 9929b04d829f5d3c4f5caa8f95dd8a3f 464 PANTHER PTHR11647:SF1 1 455 7.6E-182 T 22-04-2016 AMK43_RS09455 9929b04d829f5d3c4f5caa8f95dd8a3f 464 PANTHER PTHR11647 1 455 7.6E-182 T 22-04-2016 AMK43_RS09455 9929b04d829f5d3c4f5caa8f95dd8a3f 464 Gene3D G3DSA:2.30.40.10 1 65 9.5E-26 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS09455 9929b04d829f5d3c4f5caa8f95dd8a3f 464 SUPERFAMILY SSF51338 2 61 6.21E-17 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS09455 9929b04d829f5d3c4f5caa8f95dd8a3f 464 Gene3D G3DSA:2.30.40.10 377 455 3.0E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS09455 9929b04d829f5d3c4f5caa8f95dd8a3f 464 Pfam PF01979 Amidohydrolase family 47 436 2.5E-30 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK43_RS09455 9929b04d829f5d3c4f5caa8f95dd8a3f 464 Gene3D G3DSA:3.20.20.140 66 376 6.2E-109 T 22-04-2016 AMK43_RS09455 9929b04d829f5d3c4f5caa8f95dd8a3f 464 SUPERFAMILY SSF51556 51 383 1.03E-100 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK43_RS09455 9929b04d829f5d3c4f5caa8f95dd8a3f 464 SUPERFAMILY SSF51338 348 457 6.48E-38 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 Gene3D G3DSA:2.40.50.140 69 131 6.1E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 4.9E-25 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 SUPERFAMILY SSF50104 1 65 4.45E-6 T 22-04-2016 IPR008991 Translation protein SH3-like domain AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 Gene3D G3DSA:2.40.50.140 132 189 3.1E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 SMART SM00841 133 188 1.6E-29 T 22-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 TIGRFAM TIGR00038 efp: translation elongation factor P 4 189 7.8E-61 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 22-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 SUPERFAMILY SSF50249 69 130 5.14E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 Hamap MF_00141 Elongation factor P [efp]. 1 189 41.049 T 22-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 SMART SM01185 71 125 4.8E-22 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 PANTHER PTHR30053 1 190 5.6E-64 T 22-04-2016 AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 6.9E-6 T 22-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 73 125 3.7E-20 T 22-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 SUPERFAMILY SSF50249 132 189 2.06E-17 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 PIRSF PIRSF005901 1 190 1.4E-55 T 22-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 AMK43_RS06030 f764330b8d3eeedbc6115daa35c91325 190 Gene3D G3DSA:2.30.30.30 1 65 2.2E-6 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 Gene3D G3DSA:2.40.50.140 49 141 1.1E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 PANTHER PTHR24031 196 282 2.0E-117 T 22-04-2016 AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 PANTHER PTHR24031 21 54 2.0E-117 T 22-04-2016 AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 PANTHER PTHR24031 299 598 2.0E-117 T 22-04-2016 AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 PANTHER PTHR24031 621 666 2.0E-117 T 22-04-2016 AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 Gene3D G3DSA:3.40.50.300 252 449 6.0E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 SMART SM00487 265 455 2.1E-29 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 SUPERFAMILY SSF52540 389 657 5.2E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 Pfam PF17191 RecG wedge domain 16 175 7.9E-31 T 22-04-2016 IPR033454 RecG, wedge domain AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 Pfam PF00270 DEAD/DEAH box helicase 270 427 1.6E-18 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 Pfam PF00271 Helicase conserved C-terminal domain 467 584 1.1E-20 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 PANTHER PTHR24031:SF249 196 282 2.0E-117 T 22-04-2016 AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 PANTHER PTHR24031:SF249 21 54 2.0E-117 T 22-04-2016 AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 PANTHER PTHR24031:SF249 299 598 2.0E-117 T 22-04-2016 AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 PANTHER PTHR24031:SF249 621 666 2.0E-117 T 22-04-2016 AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 31 658 3.0E-218 T 22-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 SMART SM00490 502 585 9.4E-21 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 Gene3D G3DSA:3.40.50.300 450 633 2.6E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 SUPERFAMILY SSF50249 16 179 2.74E-40 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS01170 a0f502ba3b6ed9717b2be1d96da8997d 692 SUPERFAMILY SSF52540 184 448 3.65E-58 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10830 ebb076acf2dc0ed8c0e5ae0060c769e9 300 SUPERFAMILY SSF103481 44 144 6.93E-16 T 22-04-2016 AMK43_RS10830 ebb076acf2dc0ed8c0e5ae0060c769e9 300 SUPERFAMILY SSF103481 204 289 2.09E-11 T 22-04-2016 AMK43_RS10830 ebb076acf2dc0ed8c0e5ae0060c769e9 300 Pfam PF00892 EamA-like transporter family 11 141 2.2E-26 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK43_RS10830 ebb076acf2dc0ed8c0e5ae0060c769e9 300 Pfam PF00892 EamA-like transporter family 151 285 1.4E-16 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK43_RS10830 ebb076acf2dc0ed8c0e5ae0060c769e9 300 PANTHER PTHR22911 11 295 2.8E-47 T 22-04-2016 AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 SUPERFAMILY SSF51735 3 235 2.86E-81 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 180 0.0046 T 22-04-2016 AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 235 8.1E-64 T 22-04-2016 AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 71 82 2.3E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 163 2.3E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 132 2.3E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 Gene3D G3DSA:3.40.50.720 2 235 4.9E-85 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 PANTHER PTHR24321 1 236 2.4E-52 T 22-04-2016 AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 PANTHER PTHR24321:SF6 1 236 2.4E-52 T 22-04-2016 AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 9.8E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 9.8E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 163 9.8E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 71 82 9.8E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 134 9.8E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 218 9.8E-44 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS09365 dea8fcb55fa74ec6828cb93daec9ebc8 236 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 131 159 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK43_RS07755 20d63ee79312c812ba2cb5b1d6e4094a 1964 Gene3D G3DSA:2.40.128.130 1650 1961 2.0E-27 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS07755 20d63ee79312c812ba2cb5b1d6e4094a 1964 SMART SM00869 1672 1956 9.1E-11 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS07755 20d63ee79312c812ba2cb5b1d6e4094a 1964 SUPERFAMILY SSF103515 1651 1961 6.28E-20 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS07755 20d63ee79312c812ba2cb5b1d6e4094a 1964 Pfam PF03797 Autotransporter beta-domain 1682 1950 1.6E-32 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS07200 a526aeb16c04d6e6b7e5729a8365fc92 302 Pfam PF00119 ATP synthase A chain 63 290 8.1E-44 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK43_RS07200 a526aeb16c04d6e6b7e5729a8365fc92 302 PANTHER PTHR11410 55 139 1.1E-35 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK43_RS07200 a526aeb16c04d6e6b7e5729a8365fc92 302 PANTHER PTHR11410 156 300 1.1E-35 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK43_RS07200 a526aeb16c04d6e6b7e5729a8365fc92 302 ProSitePatterns PS00449 ATP synthase a subunit signature. 216 225 - T 22-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site AMK43_RS07200 a526aeb16c04d6e6b7e5729a8365fc92 302 Gene3D G3DSA:1.20.120.220 112 293 2.6E-38 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK43_RS07200 a526aeb16c04d6e6b7e5729a8365fc92 302 PRINTS PR00123 ATP synthase A subunit signature 277 292 5.3E-11 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK43_RS07200 a526aeb16c04d6e6b7e5729a8365fc92 302 PRINTS PR00123 ATP synthase A subunit signature 120 136 5.3E-11 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK43_RS07200 a526aeb16c04d6e6b7e5729a8365fc92 302 PRINTS PR00123 ATP synthase A subunit signature 213 235 5.3E-11 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK43_RS07200 a526aeb16c04d6e6b7e5729a8365fc92 302 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 61 292 6.5E-30 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK43_RS07200 a526aeb16c04d6e6b7e5729a8365fc92 302 Hamap MF_01393 ATP synthase subunit a [atpB]. 52 297 13.229 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK43_RS07200 a526aeb16c04d6e6b7e5729a8365fc92 302 SUPERFAMILY SSF81336 111 290 3.53E-31 T 22-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 AMK43_RS07200 a526aeb16c04d6e6b7e5729a8365fc92 302 PANTHER PTHR11410:SF7 55 139 1.1E-35 T 22-04-2016 AMK43_RS07200 a526aeb16c04d6e6b7e5729a8365fc92 302 PANTHER PTHR11410:SF7 156 300 1.1E-35 T 22-04-2016 AMK43_RS09205 8f97eb0e417f7e504684fb42276667d6 338 Gene3D G3DSA:3.30.420.40 240 284 4.5E-4 T 22-04-2016 AMK43_RS09205 8f97eb0e417f7e504684fb42276667d6 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 334 57.087 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK43_RS09205 8f97eb0e417f7e504684fb42276667d6 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 307 9.7E-108 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK43_RS09205 8f97eb0e417f7e504684fb42276667d6 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 314 3.7E-127 T 22-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK43_RS09205 8f97eb0e417f7e504684fb42276667d6 338 Pfam PF00814 Glycoprotease family 23 307 4.2E-96 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK43_RS09205 8f97eb0e417f7e504684fb42276667d6 338 Gene3D G3DSA:3.30.420.40 2 145 1.4E-43 T 22-04-2016 AMK43_RS09205 8f97eb0e417f7e504684fb42276667d6 338 PANTHER PTHR11735:SF6 1 318 3.6E-139 T 22-04-2016 AMK43_RS09205 8f97eb0e417f7e504684fb42276667d6 338 SUPERFAMILY SSF53067 2 309 7.16E-42 T 22-04-2016 AMK43_RS09205 8f97eb0e417f7e504684fb42276667d6 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 9.7E-39 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK43_RS09205 8f97eb0e417f7e504684fb42276667d6 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 9.7E-39 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK43_RS09205 8f97eb0e417f7e504684fb42276667d6 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 264 273 9.7E-39 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK43_RS09205 8f97eb0e417f7e504684fb42276667d6 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 156 177 9.7E-39 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK43_RS09205 8f97eb0e417f7e504684fb42276667d6 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 9.7E-39 T 22-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK43_RS09205 8f97eb0e417f7e504684fb42276667d6 338 PANTHER PTHR11735 1 318 3.6E-139 T 22-04-2016 AMK43_RS05050 de80761e0d81723999e00d55157e4bb6 257 Pfam PF12706 Beta-lactamase superfamily domain 23 216 2.5E-20 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS05050 de80761e0d81723999e00d55157e4bb6 257 SMART SM00849 11 190 2.5E-9 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS05050 de80761e0d81723999e00d55157e4bb6 257 Gene3D G3DSA:3.60.15.10 1 229 1.9E-37 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS05050 de80761e0d81723999e00d55157e4bb6 257 SUPERFAMILY SSF56281 1 227 5.37E-43 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS05050 de80761e0d81723999e00d55157e4bb6 257 PANTHER PTHR13754 1 256 2.9E-79 T 22-04-2016 AMK43_RS05050 de80761e0d81723999e00d55157e4bb6 257 PANTHER PTHR13754:SF15 1 256 2.9E-79 T 22-04-2016 AMK43_RS01800 8210b49f52a67f948ea9a024e220e25c 167 Pfam PF04472 Protein of unknown function (DUF552) 79 148 4.1E-18 T 22-04-2016 IPR007561 Cell division protein SepF/SepF-related GO:0000917 AMK43_RS01800 8210b49f52a67f948ea9a024e220e25c 167 PANTHER PTHR35798 79 148 1.6E-15 T 22-04-2016 AMK43_RS01800 8210b49f52a67f948ea9a024e220e25c 167 PANTHER PTHR35798:SF1 79 148 1.6E-15 T 22-04-2016 AMK43_RS01800 8210b49f52a67f948ea9a024e220e25c 167 Hamap MF_01197 Cell division protein SepF [sepF]. 1 158 14.457 T 22-04-2016 IPR023052 Cell division protein SepF GO:0090529 AMK43_RS09220 3b0d3c6009a05dd13c10e1b0f35f53cb 95 Gene3D G3DSA:3.30.70.900 1 90 1.5E-29 T 22-04-2016 AMK43_RS09220 3b0d3c6009a05dd13c10e1b0f35f53cb 95 PANTHER PTHR33336:SF3 1 95 3.0E-23 T 22-04-2016 AMK43_RS09220 3b0d3c6009a05dd13c10e1b0f35f53cb 95 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 74 2.6E-19 T 22-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain AMK43_RS09220 3b0d3c6009a05dd13c10e1b0f35f53cb 95 SUPERFAMILY SSF54909 1 93 1.21E-27 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel AMK43_RS09220 3b0d3c6009a05dd13c10e1b0f35f53cb 95 PANTHER PTHR33336 1 95 3.0E-23 T 22-04-2016 AMK43_RS01740 a3df2b728f65d8785cb4a73cc7162100 362 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 69 6.3E-10 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK43_RS01740 a3df2b728f65d8785cb4a73cc7162100 362 Gene3D G3DSA:3.40.50.620 1 172 1.2E-34 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS01740 a3df2b728f65d8785cb4a73cc7162100 362 Pfam PF13521 AAA domain 176 336 7.3E-29 T 22-04-2016 AMK43_RS01740 a3df2b728f65d8785cb4a73cc7162100 362 Pfam PF01467 Cytidylyltransferase-like 5 74 2.4E-4 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK43_RS01740 a3df2b728f65d8785cb4a73cc7162100 362 PIRSF PIRSF004776 1 356 1.5E-118 T 22-04-2016 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 AMK43_RS01740 a3df2b728f65d8785cb4a73cc7162100 362 Gene3D G3DSA:3.40.50.300 176 340 4.9E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01740 a3df2b728f65d8785cb4a73cc7162100 362 PANTHER PTHR37512 1 359 8.6E-83 T 22-04-2016 AMK43_RS01740 a3df2b728f65d8785cb4a73cc7162100 362 SUPERFAMILY SSF52374 1 164 3.85E-14 T 22-04-2016 AMK43_RS01740 a3df2b728f65d8785cb4a73cc7162100 362 SUPERFAMILY SSF52540 175 345 6.76E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 127 578 1.0E-160 T 22-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 Gene3D G3DSA:3.50.50.60 261 446 6.2E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 Pfam PF00364 Biotin-requiring enzyme 4 76 2.7E-18 T 22-04-2016 IPR000089 Biotin/lipoyl attachment AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 128 441 3.6E-70 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 380 396 2.2E-34 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 314 2.2E-34 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 130 149 2.2E-34 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 275 2.2E-34 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 406 428 2.2E-34 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 461 568 1.0E-36 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 Gene3D G3DSA:3.30.390.30 447 578 9.0E-45 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 Gene3D G3DSA:2.40.50.100 1 84 2.7E-27 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PANTHER PTHR22912 114 572 7.9E-182 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 SUPERFAMILY SSF55424 460 579 1.89E-38 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PIRSF PIRSF000350 69 574 1.6E-88 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PANTHER PTHR22912:SF125 114 572 7.9E-182 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 22-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 162 172 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 Gene3D G3DSA:3.50.50.60 126 260 5.4E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 SUPERFAMILY SSF51230 1 83 2.75E-24 T 22-04-2016 IPR011053 Single hybrid motif AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 543 563 4.8E-63 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 421 428 4.8E-63 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 269 4.8E-63 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 521 536 4.8E-63 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 161 176 4.8E-63 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 457 478 4.8E-63 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 381 395 4.8E-63 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 129 151 4.8E-63 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 296 321 4.8E-63 T 22-04-2016 AMK43_RS02715 6f98bb49d688b636bebab3dfe1e50df1 583 SUPERFAMILY SSF51905 125 448 1.23E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS03345 a4ed93f5adfce38f7d55ac0aa3ee4208 247 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 75 80 - T 22-04-2016 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04660+3.1.3.16 AMK43_RS03345 a4ed93f5adfce38f7d55ac0aa3ee4208 247 Gene3D G3DSA:3.60.21.10 4 234 8.6E-40 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS03345 a4ed93f5adfce38f7d55ac0aa3ee4208 247 SUPERFAMILY SSF56300 130 225 1.67E-37 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS03345 a4ed93f5adfce38f7d55ac0aa3ee4208 247 SUPERFAMILY SSF56300 11 89 1.67E-37 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS03345 a4ed93f5adfce38f7d55ac0aa3ee4208 247 PANTHER PTHR24032 1 178 6.3E-24 T 22-04-2016 AMK43_RS03345 a4ed93f5adfce38f7d55ac0aa3ee4208 247 Pfam PF00149 Calcineurin-like phosphoesterase 13 210 6.0E-15 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK43_RS08480 c01f5ee544bd150d55dd5fb179f95fb2 367 SUPERFAMILY SSF50331 237 365 4.62E-23 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK43_RS08480 c01f5ee544bd150d55dd5fb179f95fb2 367 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS08480 c01f5ee544bd150d55dd5fb179f95fb2 367 PANTHER PTHR24220 5 314 2.1E-170 T 22-04-2016 AMK43_RS08480 c01f5ee544bd150d55dd5fb179f95fb2 367 Pfam PF00005 ABC transporter 21 162 1.3E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS08480 c01f5ee544bd150d55dd5fb179f95fb2 367 Gene3D G3DSA:3.40.50.300 4 235 2.8E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08480 c01f5ee544bd150d55dd5fb179f95fb2 367 Gene3D G3DSA:2.40.50.100 240 287 8.3E-18 T 22-04-2016 AMK43_RS08480 c01f5ee544bd150d55dd5fb179f95fb2 367 Gene3D G3DSA:2.40.50.100 351 365 8.3E-18 T 22-04-2016 AMK43_RS08480 c01f5ee544bd150d55dd5fb179f95fb2 367 SUPERFAMILY SSF52540 4 243 1.18E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08480 c01f5ee544bd150d55dd5fb179f95fb2 367 Gene3D G3DSA:2.40.50.140 288 330 2.4E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS08480 c01f5ee544bd150d55dd5fb179f95fb2 367 SMART SM00382 29 212 1.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS08480 c01f5ee544bd150d55dd5fb179f95fb2 367 PANTHER PTHR24220:SF151 5 314 2.1E-170 T 22-04-2016 AMK43_RS06820 3a68f2bddd31dc28a408930ce47388d7 267 SUPERFAMILY SSF82185 150 265 1.44E-18 T 22-04-2016 AMK43_RS06820 3a68f2bddd31dc28a408930ce47388d7 267 PANTHER PTHR33706:SF1 1 267 3.6E-16 T 22-04-2016 AMK43_RS06820 3a68f2bddd31dc28a408930ce47388d7 267 PANTHER PTHR33706 1 267 3.6E-16 T 22-04-2016 AMK43_RS06820 3a68f2bddd31dc28a408930ce47388d7 267 Gene3D G3DSA:2.20.110.10 72 165 1.1E-11 T 22-04-2016 AMK43_RS06820 3a68f2bddd31dc28a408930ce47388d7 267 Gene3D G3DSA:2.20.110.10 166 265 1.1E-12 T 22-04-2016 AMK43_RS06820 3a68f2bddd31dc28a408930ce47388d7 267 Pfam PF07661 MORN repeat variant 182 201 0.0093 T 22-04-2016 IPR011652 MORN variant AMK43_RS06820 3a68f2bddd31dc28a408930ce47388d7 267 Pfam PF07661 MORN repeat variant 228 245 0.23 T 22-04-2016 IPR011652 MORN variant AMK43_RS06820 3a68f2bddd31dc28a408930ce47388d7 267 Pfam PF07661 MORN repeat variant 207 227 0.028 T 22-04-2016 IPR011652 MORN variant AMK43_RS06820 3a68f2bddd31dc28a408930ce47388d7 267 Pfam PF07661 MORN repeat variant 109 130 0.34 T 22-04-2016 IPR011652 MORN variant AMK43_RS06820 3a68f2bddd31dc28a408930ce47388d7 267 SUPERFAMILY SSF82185 73 170 4.84E-16 T 22-04-2016 AMK43_RS06665 d9ced512385b08832b0a7e917c374ef3 529 Gene3D G3DSA:3.10.105.10 281 497 1.6E-42 T 22-04-2016 AMK43_RS06665 d9ced512385b08832b0a7e917c374ef3 529 SUPERFAMILY SSF53850 27 513 6.52E-99 T 22-04-2016 AMK43_RS06665 d9ced512385b08832b0a7e917c374ef3 529 PIRSF PIRSF002741 1 529 5.0E-84 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK43_RS06665 d9ced512385b08832b0a7e917c374ef3 529 Gene3D G3DSA:3.90.76.10 40 209 1.5E-41 T 22-04-2016 AMK43_RS06665 d9ced512385b08832b0a7e917c374ef3 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 450 3.3E-67 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK43_RS06665 d9ced512385b08832b0a7e917c374ef3 529 PANTHER PTHR30290:SF10 1 529 2.4E-116 T 22-04-2016 AMK43_RS06665 d9ced512385b08832b0a7e917c374ef3 529 PANTHER PTHR30290 1 529 2.4E-116 T 22-04-2016 AMK43_RS08585 5710ab410753cace382f824d99a7ca9a 163 PANTHER PTHR30411 5 163 1.6E-51 T 22-04-2016 AMK43_RS08585 5710ab410753cace382f824d99a7ca9a 163 PANTHER PTHR30411:SF0 5 163 1.6E-51 T 22-04-2016 AMK43_RS08585 5710ab410753cace382f824d99a7ca9a 163 Pfam PF04073 Aminoacyl-tRNA editing domain 41 151 1.0E-21 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK43_RS08585 5710ab410753cace382f824d99a7ca9a 163 PIRSF PIRSF006181 6 163 4.3E-58 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMK43_RS08585 5710ab410753cace382f824d99a7ca9a 163 Gene3D G3DSA:3.90.960.10 4 162 1.2E-50 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK43_RS08585 5710ab410753cace382f824d99a7ca9a 163 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 11 162 1.2E-52 T 22-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC AMK43_RS08585 5710ab410753cace382f824d99a7ca9a 163 SUPERFAMILY SSF55826 11 162 5.1E-37 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK43_RS02815 2db5232f3488f14a4c79a14c90427858 451 Pfam PF10797 Protein of unknown function 11 445 5.4E-173 T 22-04-2016 IPR019733 Uncharacterised protein family YhfT AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 PANTHER PTHR10457:SF6 1 385 2.3E-134 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 Pfam PF10509 Galactokinase galactose-binding signature 6 54 3.6E-21 T 22-04-2016 IPR019539 Galactokinase galactose-binding domain KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 PANTHER PTHR10457 1 385 2.3E-134 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 SUPERFAMILY SSF54211 2 199 1.82E-65 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 TIGRFAM TIGR00131 gal_kin: galactokinase 3 384 6.2E-135 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 PIRSF PIRSF000530 1 385 7.0E-129 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 ProSitePatterns PS00106 Galactokinase signature. 24 35 - T 22-04-2016 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 Pfam PF00288 GHMP kinases N terminal domain 112 179 2.9E-14 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 Pfam PF08544 GHMP kinases C terminal 284 364 2.2E-13 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 119 130 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 PRINTS PR00959 Mevalonate kinase family signature 22 46 7.6E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 PRINTS PR00959 Mevalonate kinase family signature 117 139 7.6E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 PRINTS PR00959 Mevalonate kinase family signature 160 179 7.6E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 PRINTS PR00959 Mevalonate kinase family signature 331 348 7.6E-44 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 Hamap MF_00246 Galactokinase [galK]. 22 384 48.968 T 22-04-2016 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 Gene3D G3DSA:3.30.70.890 208 383 1.0E-61 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 Gene3D G3DSA:3.30.230.10 2 207 9.2E-73 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 PRINTS PR00473 Galactokinase signature 267 281 7.8E-28 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 PRINTS PR00473 Galactokinase signature 24 42 7.8E-28 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 PRINTS PR00473 Galactokinase signature 110 128 7.8E-28 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 PRINTS PR00473 Galactokinase signature 89 100 7.8E-28 T 22-04-2016 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02005 5f1da6115b1fd33ebe946e8c17dc2cda 385 SUPERFAMILY SSF55060 205 384 7.81E-57 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain AMK43_RS07665 ec20e386473e591abceecdbd7275277e 534 Gene3D G3DSA:3.40.190.10 118 212 2.3E-15 T 22-04-2016 AMK43_RS07665 ec20e386473e591abceecdbd7275277e 534 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 295 402 1.5E-15 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK43_RS07665 ec20e386473e591abceecdbd7275277e 534 SUPERFAMILY SSF161098 294 496 2.22E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS07665 ec20e386473e591abceecdbd7275277e 534 SMART SM00062 29 262 1.6E-38 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK43_RS07665 ec20e386473e591abceecdbd7275277e 534 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 343 507 3.4E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS07665 ec20e386473e591abceecdbd7275277e 534 PANTHER PTHR30614:SF15 62 513 3.6E-109 T 22-04-2016 AMK43_RS07665 ec20e386473e591abceecdbd7275277e 534 Gene3D G3DSA:1.10.3720.10 292 508 9.8E-54 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS07665 ec20e386473e591abceecdbd7275277e 534 SUPERFAMILY SSF53850 6 255 3.88E-46 T 22-04-2016 AMK43_RS07665 ec20e386473e591abceecdbd7275277e 534 PANTHER PTHR30614 62 513 3.6E-109 T 22-04-2016 AMK43_RS07665 ec20e386473e591abceecdbd7275277e 534 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 30 255 9.9E-43 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK43_RS07665 ec20e386473e591abceecdbd7275277e 534 Gene3D G3DSA:3.40.190.10 27 117 9.7E-32 T 22-04-2016 AMK43_RS07665 ec20e386473e591abceecdbd7275277e 534 Gene3D G3DSA:3.40.190.10 228 261 9.7E-32 T 22-04-2016 AMK43_RS01950 7e32213231e12cb8ec33a0b8c8899ca1 548 SUPERFAMILY SSF90123 6 313 3.79E-41 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS01950 7e32213231e12cb8ec33a0b8c8899ca1 548 PANTHER PTHR24221:SF138 7 548 1.2E-89 T 22-04-2016 AMK43_RS01950 7e32213231e12cb8ec33a0b8c8899ca1 548 Pfam PF00664 ABC transporter transmembrane region 17 285 1.4E-27 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS01950 7e32213231e12cb8ec33a0b8c8899ca1 548 Pfam PF00005 ABC transporter 353 505 2.7E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS01950 7e32213231e12cb8ec33a0b8c8899ca1 548 Gene3D G3DSA:1.20.1560.10 7 313 1.2E-37 T 22-04-2016 AMK43_RS01950 7e32213231e12cb8ec33a0b8c8899ca1 548 PANTHER PTHR24221 7 548 1.2E-89 T 22-04-2016 AMK43_RS01950 7e32213231e12cb8ec33a0b8c8899ca1 548 SMART SM00382 362 542 1.5E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS01950 7e32213231e12cb8ec33a0b8c8899ca1 548 SUPERFAMILY SSF52540 335 547 4.55E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01950 7e32213231e12cb8ec33a0b8c8899ca1 548 Gene3D G3DSA:3.40.50.300 339 547 1.5E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04415 e3b7e82b6d8b2ae19c83dd79a56abd92 324 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 204 226 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMK43_RS04415 e3b7e82b6d8b2ae19c83dd79a56abd92 324 Gene3D G3DSA:3.40.50.720 4 117 7.3E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS04415 e3b7e82b6d8b2ae19c83dd79a56abd92 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 233 249 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMK43_RS04415 e3b7e82b6d8b2ae19c83dd79a56abd92 324 PANTHER PTHR10996:SF91 1 319 7.5E-89 T 22-04-2016 AMK43_RS04415 e3b7e82b6d8b2ae19c83dd79a56abd92 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 20 319 2.6E-22 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AMK43_RS04415 e3b7e82b6d8b2ae19c83dd79a56abd92 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 294 6.2E-51 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMK43_RS04415 e3b7e82b6d8b2ae19c83dd79a56abd92 324 PANTHER PTHR10996 1 319 7.5E-89 T 22-04-2016 AMK43_RS04415 e3b7e82b6d8b2ae19c83dd79a56abd92 324 SUPERFAMILY SSF51735 104 295 3.03E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS04415 e3b7e82b6d8b2ae19c83dd79a56abd92 324 SUPERFAMILY SSF52283 4 133 9.83E-27 T 22-04-2016 AMK43_RS04415 e3b7e82b6d8b2ae19c83dd79a56abd92 324 Gene3D G3DSA:3.40.50.720 118 295 3.4E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 174 189 2.4E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 191 213 2.4E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 59 81 2.4E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 224 236 2.4E-23 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 PANTHER PTHR11766:SF1 13 410 4.1E-184 T 22-04-2016 AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 13 410 6.7E-119 T 22-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 SUPERFAMILY SSF52374 15 330 9.65E-91 T 22-04-2016 AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 Gene3D G3DSA:3.10.290.10 343 410 2.7E-21 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 PANTHER PTHR11766 13 410 4.1E-184 T 22-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 Gene3D G3DSA:3.40.50.620 17 240 1.0E-78 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 Pfam PF00579 tRNA synthetases class I (W and Y) 45 330 4.5E-75 T 22-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 Pfam PF01479 S4 domain 353 393 3.7E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 SUPERFAMILY SSF55174 313 409 4.97E-15 T 22-04-2016 AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 Gene3D G3DSA:1.10.240.10 241 342 3.8E-32 T 22-04-2016 AMK43_RS01910 ee85eef422a5a9d9d8f42424bf3bdadb 410 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 11 410 41.83 T 22-04-2016 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 AMK43_RS06130 e6921f773b4f641e35cb7073419fb577 462 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 252 414 4.8E-19 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AMK43_RS06130 e6921f773b4f641e35cb7073419fb577 462 Pfam PF04191 Phospholipid methyltransferase 46 144 2.4E-10 T 22-04-2016 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|UniPathway: UPA00753 AMK43_RS06130 e6921f773b4f641e35cb7073419fb577 462 PANTHER PTHR30589 258 439 6.2E-12 T 22-04-2016 AMK43_RS05810 395cec6512e5b7b6aa06ad35bf2d0815 629 PANTHER PTHR24221 378 627 4.7E-218 T 22-04-2016 AMK43_RS05810 395cec6512e5b7b6aa06ad35bf2d0815 629 PANTHER PTHR24221 18 351 4.7E-218 T 22-04-2016 AMK43_RS05810 395cec6512e5b7b6aa06ad35bf2d0815 629 ProSitePatterns PS00211 ABC transporters family signature. 527 541 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS05810 395cec6512e5b7b6aa06ad35bf2d0815 629 Gene3D G3DSA:3.40.50.300 390 620 1.7E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05810 395cec6512e5b7b6aa06ad35bf2d0815 629 PANTHER PTHR24221:SF271 378 627 4.7E-218 T 22-04-2016 AMK43_RS05810 395cec6512e5b7b6aa06ad35bf2d0815 629 PANTHER PTHR24221:SF271 18 351 4.7E-218 T 22-04-2016 AMK43_RS05810 395cec6512e5b7b6aa06ad35bf2d0815 629 Pfam PF00664 ABC transporter transmembrane region 34 311 1.6E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS05810 395cec6512e5b7b6aa06ad35bf2d0815 629 SMART SM00382 415 601 8.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS05810 395cec6512e5b7b6aa06ad35bf2d0815 629 SUPERFAMILY SSF90123 16 341 1.28E-68 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS05810 395cec6512e5b7b6aa06ad35bf2d0815 629 Pfam PF00005 ABC transporter 406 555 3.4E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS05810 395cec6512e5b7b6aa06ad35bf2d0815 629 Gene3D G3DSA:1.20.1560.10 20 341 7.0E-70 T 22-04-2016 AMK43_RS05810 395cec6512e5b7b6aa06ad35bf2d0815 629 SUPERFAMILY SSF52540 379 623 1.63E-91 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00330 270f5258e4c467c540bc013f91a23dd2 77 Pfam PF01084 Ribosomal protein S18 19 70 2.6E-23 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00330 270f5258e4c467c540bc013f91a23dd2 77 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 23 73 1.0E-5 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00330 270f5258e4c467c540bc013f91a23dd2 77 Gene3D G3DSA:4.10.640.10 14 74 2.0E-25 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00330 270f5258e4c467c540bc013f91a23dd2 77 PANTHER PTHR13479 1 73 1.2E-22 T 22-04-2016 AMK43_RS00330 270f5258e4c467c540bc013f91a23dd2 77 ProSitePatterns PS00057 Ribosomal protein S18 signature. 23 46 - T 22-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00330 270f5258e4c467c540bc013f91a23dd2 77 PRINTS PR00974 Ribosomal protein S18 family signature 40 47 1.3E-15 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00330 270f5258e4c467c540bc013f91a23dd2 77 PRINTS PR00974 Ribosomal protein S18 family signature 48 62 1.3E-15 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00330 270f5258e4c467c540bc013f91a23dd2 77 PRINTS PR00974 Ribosomal protein S18 family signature 62 72 1.3E-15 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00330 270f5258e4c467c540bc013f91a23dd2 77 PRINTS PR00974 Ribosomal protein S18 family signature 30 40 1.3E-15 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00330 270f5258e4c467c540bc013f91a23dd2 77 SUPERFAMILY SSF46911 5 73 3.27E-23 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00330 270f5258e4c467c540bc013f91a23dd2 77 TIGRFAM TIGR00165 S18: ribosomal protein bS18 8 73 2.9E-23 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00330 270f5258e4c467c540bc013f91a23dd2 77 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 8 75 19.033 T 22-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 SUPERFAMILY SSF56784 417 437 1.65E-58 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 SUPERFAMILY SSF56784 479 718 1.65E-58 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 421 427 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 PANTHER PTHR24093:SF210 10 721 0.0 T 22-04-2016 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 Gene3D G3DSA:2.70.150.10 165 315 7.1E-25 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 617 636 2.6E-22 T 22-04-2016 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 653 2.6E-22 T 22-04-2016 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 264 278 2.6E-22 T 22-04-2016 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 419 433 2.6E-22 T 22-04-2016 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 561 571 2.6E-22 T 22-04-2016 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 PANTHER PTHR24093 10 721 0.0 T 22-04-2016 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 SUPERFAMILY SSF55008 3 65 3.93E-9 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 Gene3D G3DSA:3.40.50.1000 540 688 1.0E-43 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 Pfam PF00403 Heavy-metal-associated domain 10 65 1.6E-6 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 Gene3D G3DSA:3.30.70.100 3 65 5.2E-9 T 22-04-2016 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 165 722 2.9E-156 T 22-04-2016 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 Gene3D G3DSA:3.40.1110.10 443 539 1.0E-12 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 SUPERFAMILY SSF81653 217 314 1.57E-22 T 22-04-2016 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 Gene3D G3DSA:3.40.1110.10 410 442 3.3E-4 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 PRINTS PR00941 Cadmium-transporting ATPase signature 199 219 2.9E-12 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 PRINTS PR00941 Cadmium-transporting ATPase signature 299 313 2.9E-12 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 PRINTS PR00941 Cadmium-transporting ATPase signature 10 19 2.9E-12 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 PRINTS PR00941 Cadmium-transporting ATPase signature 21 42 2.9E-12 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 PRINTS PR00941 Cadmium-transporting ATPase signature 280 296 2.9E-12 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 165 720 3.9E-174 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 Pfam PF00702 haloacid dehalogenase-like hydrolase 416 631 4.5E-33 T 22-04-2016 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 SUPERFAMILY SSF81665 165 218 1.14E-9 T 22-04-2016 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 SUPERFAMILY SSF81665 315 412 1.14E-9 T 22-04-2016 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 187 695 2.2E-67 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK43_RS10085 810621c1c874c7274694bbbec89ff889 725 Pfam PF00122 E1-E2 ATPase 186 410 4.5E-58 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK43_RS05445 420601d4be091b574438a8fa01fae6d4 234 SUPERFAMILY SSF69065 7 166 8.02E-44 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMK43_RS05445 420601d4be091b574438a8fa01fae6d4 234 Pfam PF00035 Double-stranded RNA binding motif 164 229 2.7E-17 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain AMK43_RS05445 420601d4be091b574438a8fa01fae6d4 234 SMART SM00358 164 231 3.5E-22 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain AMK43_RS05445 420601d4be091b574438a8fa01fae6d4 234 Gene3D G3DSA:3.30.160.20 163 228 6.4E-27 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain AMK43_RS05445 420601d4be091b574438a8fa01fae6d4 234 ProSitePatterns PS00517 Ribonuclease III family signature. 46 54 - T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMK43_RS05445 420601d4be091b574438a8fa01fae6d4 234 SMART SM00535 22 157 1.3E-42 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMK43_RS05445 420601d4be091b574438a8fa01fae6d4 234 PANTHER PTHR11207 8 227 1.8E-71 T 22-04-2016 AMK43_RS05445 420601d4be091b574438a8fa01fae6d4 234 Pfam PF14622 Ribonuclease-III-like 20 152 1.6E-33 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMK43_RS05445 420601d4be091b574438a8fa01fae6d4 234 SUPERFAMILY SSF54768 118 230 1.37E-23 T 22-04-2016 AMK43_RS05445 420601d4be091b574438a8fa01fae6d4 234 Gene3D G3DSA:1.10.1520.10 8 153 7.5E-43 T 22-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 AMK43_RS05445 420601d4be091b574438a8fa01fae6d4 234 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 10 228 2.8E-74 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 AMK43_RS05445 420601d4be091b574438a8fa01fae6d4 234 Hamap MF_00104 Ribonuclease 3 [rnc]. 10 227 29.374 T 22-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 TIGRFAM TIGR00492 alr: alanine racemase 3 358 6.3E-104 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 Pfam PF00842 Alanine racemase, C-terminal domain 233 358 6.9E-39 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 PRINTS PR00992 Alanine racemase signature 61 79 1.5E-51 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 PRINTS PR00992 Alanine racemase signature 341 354 1.5E-51 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 PRINTS PR00992 Alanine racemase signature 152 163 1.5E-51 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 PRINTS PR00992 Alanine racemase signature 25 41 1.5E-51 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 PRINTS PR00992 Alanine racemase signature 194 221 1.5E-51 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 PRINTS PR00992 Alanine racemase signature 118 130 1.5E-51 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 PRINTS PR00992 Alanine racemase signature 287 304 1.5E-51 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 PRINTS PR00992 Alanine racemase signature 249 264 1.5E-51 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 PRINTS PR00992 Alanine racemase signature 266 281 1.5E-51 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 Gene3D G3DSA:2.40.37.10 213 358 6.7E-52 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 SMART SM01005 233 359 1.4E-56 T 22-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 SUPERFAMILY SSF50621 226 358 2.65E-44 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 Pfam PF01168 Alanine racemase, N-terminal domain 7 219 8.2E-55 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 PANTHER PTHR30511 1 358 1.9E-120 T 22-04-2016 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 22-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 Hamap MF_01201 Alanine racemase. 1 359 30.33 T 22-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 SUPERFAMILY SSF51419 7 234 7.59E-55 T 22-04-2016 IPR029066 PLP-binding barrel AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 Gene3D G3DSA:3.20.20.10 10 212 3.7E-63 T 22-04-2016 IPR029066 PLP-binding barrel AMK43_RS07915 b2bb9bd68b988a4f557ce10df5131ce7 359 PANTHER PTHR30511:SF0 1 358 1.9E-120 T 22-04-2016 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 SUPERFAMILY SSF52402 180 435 2.01E-56 T 22-04-2016 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 SUPERFAMILY SSF52317 4 196 1.26E-50 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 Pfam PF00958 GMP synthase C terminal domain 423 513 4.3E-42 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 Gene3D G3DSA:3.40.50.880 3 209 9.1E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 5 192 2.1E-70 T 22-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 Gene3D G3DSA:3.40.50.620 210 388 5.5E-54 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 PANTHER PTHR11922 2 511 2.7E-275 T 22-04-2016 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 2 514 53.831 T 22-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 Gene3D G3DSA:3.30.300.10 390 514 7.3E-53 T 22-04-2016 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 Pfam PF00117 Glutamine amidotransferase class-I 7 187 1.6E-38 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 Pfam PF02540 NAD synthase 200 242 3.2E-5 T 22-04-2016 IPR022310 NAD/GMP synthase AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 7.5E-7 T 22-04-2016 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 7.5E-7 T 22-04-2016 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 7.5E-7 T 22-04-2016 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 PRINTS PR00097 Anthranilate synthase component II signature 50 59 1.3E-5 T 22-04-2016 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 PRINTS PR00097 Anthranilate synthase component II signature 77 88 1.3E-5 T 22-04-2016 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.3E-5 T 22-04-2016 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 SUPERFAMILY SSF54810 394 514 1.03E-49 T 22-04-2016 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 199 514 5.1E-145 T 22-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 AMK43_RS10930 ec6330de4a50e83b50743df48ebfce4d 514 PANTHER PTHR11922:SF2 2 511 2.7E-275 T 22-04-2016 AMK43_RS00495 0c989412945721280f628db2dfc7aef9 204 SUPERFAMILY SSF52080 141 186 1.62E-10 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P AMK43_RS00495 0c989412945721280f628db2dfc7aef9 204 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 183 5.1E-38 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P AMK43_RS00495 0c989412945721280f628db2dfc7aef9 204 PANTHER PTHR12934 155 185 1.2E-55 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK43_RS00495 0c989412945721280f628db2dfc7aef9 204 PANTHER PTHR12934 1 117 1.2E-55 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK43_RS00495 0c989412945721280f628db2dfc7aef9 204 Gene3D G3DSA:3.100.10.10 147 189 1.4E-32 T 22-04-2016 AMK43_RS00495 0c989412945721280f628db2dfc7aef9 204 Gene3D G3DSA:3.100.10.10 32 105 1.4E-32 T 22-04-2016 AMK43_RS00495 0c989412945721280f628db2dfc7aef9 204 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 112 5.0E-40 T 22-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK43_RS00495 0c989412945721280f628db2dfc7aef9 204 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 185 19.91 T 22-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 AMK43_RS00495 0c989412945721280f628db2dfc7aef9 204 SUPERFAMILY SSF52080 4 112 6.15E-31 T 22-04-2016 IPR021131 Ribosomal protein L18e/L15P AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 4 401 1.4E-187 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 SUPERFAMILY SSF57716 6 43 7.84E-8 T 22-04-2016 AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 310 388 7.8E-16 T 22-04-2016 IPR019489 Clp ATPase, C-terminal AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 SMART SM00994 5 46 3.2E-16 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 Gene3D G3DSA:3.40.50.300 287 304 1.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 Gene3D G3DSA:3.40.50.300 61 249 1.3E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 SMART SM00382 107 326 1.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 SUPERFAMILY SSF52540 59 397 2.9E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 Pfam PF06689 ClpX C4-type zinc finger 8 45 9.5E-16 T 22-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 Gene3D G3DSA:1.10.8.60 310 404 1.0E-37 T 22-04-2016 AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 PANTHER PTHR11262:SF4 8 401 3.7E-221 T 22-04-2016 AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 405 49.224 T 22-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 PANTHER PTHR11262 8 401 3.7E-221 T 22-04-2016 AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 SMART SM01086 310 402 1.0E-33 T 22-04-2016 IPR019489 Clp ATPase, C-terminal AMK43_RS04935 afe72c6f4e730e3e13e29f658cba07f1 405 Pfam PF07724 AAA domain (Cdc48 subfamily) 107 304 5.6E-47 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK43_RS09500 0089b4a22005aa8ca83d0a2f22820ccf 260 Gene3D G3DSA:3.30.420.40 96 232 4.6E-47 T 22-04-2016 AMK43_RS09500 0089b4a22005aa8ca83d0a2f22820ccf 260 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 6 248 3.7E-76 T 22-04-2016 IPR008275 CoA enzyme activase AMK43_RS09500 0089b4a22005aa8ca83d0a2f22820ccf 260 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 249 2.7E-53 T 22-04-2016 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type AMK43_RS09500 0089b4a22005aa8ca83d0a2f22820ccf 260 PANTHER PTHR32329 1 248 1.7E-102 T 22-04-2016 AMK43_RS09500 0089b4a22005aa8ca83d0a2f22820ccf 260 SUPERFAMILY SSF53067 5 248 1.01E-41 T 22-04-2016 AMK43_RS03185 cb6e926786b1cba626900be1a7fa0f8d 382 Pfam PF00266 Aminotransferase class-V 2 366 3.3E-65 T 22-04-2016 IPR000192 Aminotransferase class V domain AMK43_RS03185 cb6e926786b1cba626900be1a7fa0f8d 382 SUPERFAMILY SSF53383 1 376 3.8E-84 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS03185 cb6e926786b1cba626900be1a7fa0f8d 382 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMK43_RS03185 cb6e926786b1cba626900be1a7fa0f8d 382 Gene3D G3DSA:3.90.1150.10 251 366 1.1E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS03185 cb6e926786b1cba626900be1a7fa0f8d 382 PIRSF PIRSF005572 1 382 1.5E-101 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AMK43_RS03185 cb6e926786b1cba626900be1a7fa0f8d 382 PANTHER PTHR11601 1 382 2.5E-119 T 22-04-2016 AMK43_RS03185 cb6e926786b1cba626900be1a7fa0f8d 382 Gene3D G3DSA:3.40.640.10 14 250 2.4E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS07590 35566373666167df8e2764afc330ae18 167 Hamap MF_00109 Shikimate kinase [aroK]. 2 162 25.053 T 22-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS07590 35566373666167df8e2764afc330ae18 167 SUPERFAMILY SSF52540 2 161 1.02E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07590 35566373666167df8e2764afc330ae18 167 PANTHER PTHR21087 1 162 2.5E-44 T 22-04-2016 AMK43_RS07590 35566373666167df8e2764afc330ae18 167 ProSitePatterns PS01128 Shikimate kinase signature. 58 83 - T 22-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS07590 35566373666167df8e2764afc330ae18 167 PRINTS PR01100 Shikimate kinase family signature 96 113 3.5E-20 T 22-04-2016 AMK43_RS07590 35566373666167df8e2764afc330ae18 167 PRINTS PR01100 Shikimate kinase family signature 75 84 3.5E-20 T 22-04-2016 AMK43_RS07590 35566373666167df8e2764afc330ae18 167 PRINTS PR01100 Shikimate kinase family signature 57 65 3.5E-20 T 22-04-2016 AMK43_RS07590 35566373666167df8e2764afc330ae18 167 PRINTS PR01100 Shikimate kinase family signature 5 20 3.5E-20 T 22-04-2016 AMK43_RS07590 35566373666167df8e2764afc330ae18 167 PRINTS PR01100 Shikimate kinase family signature 29 42 3.5E-20 T 22-04-2016 AMK43_RS07590 35566373666167df8e2764afc330ae18 167 PANTHER PTHR21087:SF0 1 162 2.5E-44 T 22-04-2016 AMK43_RS07590 35566373666167df8e2764afc330ae18 167 Gene3D G3DSA:3.40.50.300 2 163 2.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07590 35566373666167df8e2764afc330ae18 167 Pfam PF01202 Shikimate kinase 12 161 7.0E-44 T 22-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS00455 0c2f84447d1e8aa6e1c0445a4029edbe 128 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 65 128 3.6E-22 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00455 0c2f84447d1e8aa6e1c0445a4029edbe 128 Gene3D G3DSA:2.30.30.30 7 117 1.8E-21 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 AMK43_RS00455 0c2f84447d1e8aa6e1c0445a4029edbe 128 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 13 128 1.5E-26 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00455 0c2f84447d1e8aa6e1c0445a4029edbe 128 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 13 127 18.681 T 22-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00455 0c2f84447d1e8aa6e1c0445a4029edbe 128 SUPERFAMILY SSF50104 11 125 1.73E-28 T 22-04-2016 IPR008991 Translation protein SH3-like domain AMK43_RS00455 0c2f84447d1e8aa6e1c0445a4029edbe 128 PANTHER PTHR12903 43 128 5.2E-32 T 22-04-2016 AMK43_RS00455 0c2f84447d1e8aa6e1c0445a4029edbe 128 PANTHER PTHR12903 3 27 5.2E-32 T 22-04-2016 AMK43_RS06445 f185c0e92ac191566fea7faca80a4efc 501 SUPERFAMILY SSF52540 2 214 6.56E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06445 f185c0e92ac191566fea7faca80a4efc 501 Pfam PF00005 ABC transporter 269 424 2.7E-15 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS06445 f185c0e92ac191566fea7faca80a4efc 501 Pfam PF00005 ABC transporter 15 164 1.1E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS06445 f185c0e92ac191566fea7faca80a4efc 501 Gene3D G3DSA:3.40.50.300 2 216 1.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06445 f185c0e92ac191566fea7faca80a4efc 501 Gene3D G3DSA:3.40.50.300 249 484 2.8E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06445 f185c0e92ac191566fea7faca80a4efc 501 PANTHER PTHR24220:SF239 1 377 4.3E-164 T 22-04-2016 AMK43_RS06445 f185c0e92ac191566fea7faca80a4efc 501 SUPERFAMILY SSF52540 251 480 2.08E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06445 f185c0e92ac191566fea7faca80a4efc 501 ProSitePatterns PS00211 ABC transporters family signature. 397 411 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS06445 f185c0e92ac191566fea7faca80a4efc 501 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS06445 f185c0e92ac191566fea7faca80a4efc 501 SMART SM00382 23 212 1.2E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS06445 f185c0e92ac191566fea7faca80a4efc 501 PANTHER PTHR24220 1 377 4.3E-164 T 22-04-2016 AMK43_RS11370 eba53725899d94ae6b874c9443c3a9bf 372 SUPERFAMILY SSF53756 73 340 1.7E-28 T 22-04-2016 AMK43_RS11370 eba53725899d94ae6b874c9443c3a9bf 372 Gene3D G3DSA:3.40.50.2000 189 252 1.9E-5 T 22-04-2016 AMK43_RS11370 eba53725899d94ae6b874c9443c3a9bf 372 PANTHER PTHR12526:SF141 197 300 8.0E-15 T 22-04-2016 AMK43_RS11370 eba53725899d94ae6b874c9443c3a9bf 372 PANTHER PTHR12526 197 300 8.0E-15 T 22-04-2016 AMK43_RS11370 eba53725899d94ae6b874c9443c3a9bf 372 Pfam PF13692 Glycosyl transferases group 1 208 313 2.7E-11 T 22-04-2016 AMK43_RS06070 c03aaae83945bb51f8a037548dd9b45e 129 Pfam PF09403 Adhesion protein FadA 1 124 1.7E-27 T 22-04-2016 IPR018543 Adhesion protein FadA AMK43_RS11110 9a48770556a6bba5cc6d552da33c07d7 245 PIRSF PIRSF028162 5 240 2.2E-45 T 22-04-2016 IPR016873 Capsular polysaccharide biosynthesis protein, BcbE, predicted AMK43_RS11110 9a48770556a6bba5cc6d552da33c07d7 245 Pfam PF00483 Nucleotidyl transferase 10 217 6.2E-5 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMK43_RS11110 9a48770556a6bba5cc6d552da33c07d7 245 SUPERFAMILY SSF53448 3 235 1.55E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11110 9a48770556a6bba5cc6d552da33c07d7 245 Gene3D G3DSA:3.90.550.10 4 242 7.5E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS05995 14fc8c21a1827ddb2aafe3001596e59a 405 SUPERFAMILY SSF81901 178 297 9.68E-18 T 22-04-2016 AMK43_RS05995 14fc8c21a1827ddb2aafe3001596e59a 405 Gene3D G3DSA:1.25.40.10 170 303 1.9E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS05995 14fc8c21a1827ddb2aafe3001596e59a 405 Gene3D G3DSA:1.25.40.10 90 149 4.7E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS05995 14fc8c21a1827ddb2aafe3001596e59a 405 PANTHER PTHR11102 90 147 3.4E-14 T 22-04-2016 AMK43_RS05995 14fc8c21a1827ddb2aafe3001596e59a 405 PANTHER PTHR11102 215 304 3.4E-14 T 22-04-2016 AMK43_RS05995 14fc8c21a1827ddb2aafe3001596e59a 405 SUPERFAMILY SSF81901 90 150 1.44E-8 T 22-04-2016 AMK43_RS02250 a091d957e64ffc7ec3a9f84dde15a178 314 Pfam PF08279 HTH domain 6 60 4.9E-11 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 AMK43_RS02250 a091d957e64ffc7ec3a9f84dde15a178 314 Pfam PF13280 WYL domain 139 305 1.7E-15 T 22-04-2016 IPR026881 WYL domain AMK43_RS02250 a091d957e64ffc7ec3a9f84dde15a178 314 SUPERFAMILY SSF46785 1 61 6.07E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02250 a091d957e64ffc7ec3a9f84dde15a178 314 PANTHER PTHR30363 1 310 3.3E-47 T 22-04-2016 AMK43_RS02250 a091d957e64ffc7ec3a9f84dde15a178 314 Gene3D G3DSA:1.10.10.10 1 62 8.4E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02250 a091d957e64ffc7ec3a9f84dde15a178 314 PANTHER PTHR30363:SF23 1 310 3.3E-47 T 22-04-2016 AMK43_RS11245 303dc8294ed17f8b677330b0707acd9c 439 PANTHER PTHR11780:SF1 14 439 3.4E-127 T 22-04-2016 AMK43_RS11245 303dc8294ed17f8b677330b0707acd9c 439 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 11 434 6.9E-137 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AMK43_RS11245 303dc8294ed17f8b677330b0707acd9c 439 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 129 276 2.3E-44 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain AMK43_RS11245 303dc8294ed17f8b677330b0707acd9c 439 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 365 376 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK43_RS11245 303dc8294ed17f8b677330b0707acd9c 439 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 405 416 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK43_RS11245 303dc8294ed17f8b677330b0707acd9c 439 Pfam PF13375 RnfC Barrel sandwich hybrid domain 10 102 1.2E-22 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain AMK43_RS11245 303dc8294ed17f8b677330b0707acd9c 439 PANTHER PTHR11780 14 439 3.4E-127 T 22-04-2016 AMK43_RS11245 303dc8294ed17f8b677330b0707acd9c 439 Pfam PF12838 4Fe-4S dicluster domain 365 418 1.9E-12 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK43_RS11245 303dc8294ed17f8b677330b0707acd9c 439 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 439 110.666 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AMK43_RS11245 303dc8294ed17f8b677330b0707acd9c 439 SUPERFAMILY SSF46548 324 435 6.02E-22 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMK43_RS11245 303dc8294ed17f8b677330b0707acd9c 439 Gene3D G3DSA:1.10.1060.10 359 436 1.9E-19 T 22-04-2016 AMK43_RS11245 303dc8294ed17f8b677330b0707acd9c 439 SUPERFAMILY SSF142019 112 295 2.48E-49 T 22-04-2016 AMK43_RS00860 82d61d3fd1d62a6ef3365f749c3cf9d0 238 PIRSF PIRSF036427 1 236 2.1E-77 T 22-04-2016 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 AMK43_RS00860 82d61d3fd1d62a6ef3365f749c3cf9d0 238 SUPERFAMILY SSF53790 4 229 3.66E-42 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK43_RS00860 82d61d3fd1d62a6ef3365f749c3cf9d0 238 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 4 229 1.1E-67 T 22-04-2016 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 AMK43_RS00860 82d61d3fd1d62a6ef3365f749c3cf9d0 238 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 208 1.2E-46 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK43_RS00860 82d61d3fd1d62a6ef3365f749c3cf9d0 238 PANTHER PTHR10882:SF1 4 164 1.1E-51 T 22-04-2016 AMK43_RS00860 82d61d3fd1d62a6ef3365f749c3cf9d0 238 Gene3D G3DSA:3.40.1010.10 1 127 2.5E-32 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AMK43_RS00860 82d61d3fd1d62a6ef3365f749c3cf9d0 238 PANTHER PTHR10882 4 164 1.1E-51 T 22-04-2016 AMK43_RS08955 8274188bd3e99eca60a3244bc57ba688 69 PANTHER PTHR33162:SF1 1 69 6.9E-13 T 22-04-2016 AMK43_RS08955 8274188bd3e99eca60a3244bc57ba688 69 Pfam PF02416 mttA/Hcf106 family 7 57 8.6E-15 T 22-04-2016 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 AMK43_RS08955 8274188bd3e99eca60a3244bc57ba688 69 PANTHER PTHR33162 1 69 6.9E-13 T 22-04-2016 AMK43_RS08130 d1dabe703c4098368b2b2e4cd25a333a 345 PANTHER PTHR22976:SF28 1 345 4.7E-114 T 22-04-2016 AMK43_RS08130 d1dabe703c4098368b2b2e4cd25a333a 345 SMART SM00729 52 263 4.5E-24 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK43_RS08130 d1dabe703c4098368b2b2e4cd25a333a 345 TIGRFAM TIGR03956 rSAM_HydE: [FeFe] hydrogenase H-cluster radical SAM maturase HydE 4 343 4.1E-175 T 22-04-2016 IPR024021 [FeFe]-hydrogenase maturation HydE, radical SAM AMK43_RS08130 d1dabe703c4098368b2b2e4cd25a333a 345 SUPERFAMILY SSF102114 12 296 8.44E-55 T 22-04-2016 AMK43_RS08130 d1dabe703c4098368b2b2e4cd25a333a 345 Gene3D G3DSA:3.20.20.70 12 334 1.8E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS08130 d1dabe703c4098368b2b2e4cd25a333a 345 PANTHER PTHR22976 1 345 4.7E-114 T 22-04-2016 AMK43_RS08130 d1dabe703c4098368b2b2e4cd25a333a 345 Pfam PF04055 Radical SAM superfamily 56 216 2.9E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS08130 d1dabe703c4098368b2b2e4cd25a333a 345 PIRSF PIRSF004762 1 322 1.7E-68 T 22-04-2016 IPR005244 FO synthase, subunit 2-like GO:0016765|GO:0051188|GO:0051539 KEGG: 00680+2.5.1.77|MetaCyc: PWY-5198|UniPathway: UPA00072 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 Gene3D G3DSA:1.10.10.10 322 391 7.9E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 Pfam PF04542 Sigma-70 region 2 160 229 1.3E-21 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 Gene3D G3DSA:1.10.601.10 27 229 5.1E-68 T 22-04-2016 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 Pfam PF03979 Sigma-70 factor, region 1.1 9 70 5.8E-10 T 22-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 PANTHER PTHR30603:SF0 83 391 4.8E-170 T 22-04-2016 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 PANTHER PTHR30603:SF0 6 67 4.8E-170 T 22-04-2016 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 Gene3D G3DSA:1.10.10.10 233 284 5.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 PANTHER PTHR30603 83 391 4.8E-170 T 22-04-2016 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 PANTHER PTHR30603 6 67 4.8E-170 T 22-04-2016 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 156 381 8.7E-39 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 Pfam PF04545 Sigma-70, region 4 328 381 1.3E-18 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 7 393 31.744 T 22-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 Pfam PF04539 Sigma-70 region 3 239 314 1.1E-27 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 SUPERFAMILY SSF88659 290 391 1.68E-29 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 353 379 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 184 197 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 SUPERFAMILY SSF88659 233 307 8.28E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 PRINTS PR00046 Major sigma-70 factor signature 332 344 3.6E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 PRINTS PR00046 Major sigma-70 factor signature 208 216 3.6E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 PRINTS PR00046 Major sigma-70 factor signature 184 197 3.6E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 PRINTS PR00046 Major sigma-70 factor signature 353 368 3.6E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 PRINTS PR00046 Major sigma-70 factor signature 368 379 3.6E-30 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 156 392 8.3E-122 T 22-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 Pfam PF00140 Sigma-70 factor, region 1.2 123 155 2.4E-14 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03280 374d52559ec6b7febd42122af44184b6 393 SUPERFAMILY SSF88946 21 227 6.15E-55 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 4 319 33.467 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 Gene3D G3DSA:1.10.150.20 252 319 1.9E-27 T 22-04-2016 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 Gene3D G3DSA:3.30.1360.10 9 66 7.6E-10 T 22-04-2016 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 Gene3D G3DSA:2.170.120.12 67 172 4.3E-38 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 SUPERFAMILY SSF55257 5 52 7.85E-27 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 SUPERFAMILY SSF55257 174 228 7.85E-27 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 PANTHER PTHR32108 23 322 4.8E-112 T 22-04-2016 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 SMART SM00662 22 229 3.1E-64 T 22-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 23 318 2.2E-110 T 22-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 250 311 1.1E-24 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 28 222 7.7E-21 T 22-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 63 152 1.2E-19 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 SUPERFAMILY SSF56553 52 173 5.06E-37 T 22-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 PANTHER PTHR32108:SF0 23 322 4.8E-112 T 22-04-2016 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 259 316 3.0E-17 T 22-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 AMK43_RS01290 d762fa361f925c13444441097fd49829 322 SUPERFAMILY SSF47789 253 319 6.8E-22 T 22-04-2016 AMK43_RS03455 ecb73bcc816998255253e8ff1c62b72d 360 PANTHER PTHR10804 114 358 2.6E-83 T 22-04-2016 AMK43_RS03455 ecb73bcc816998255253e8ff1c62b72d 360 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 287 299 - T 22-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site AMK43_RS03455 ecb73bcc816998255253e8ff1c62b72d 360 SUPERFAMILY SSF55920 88 351 2.22E-75 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK43_RS03455 ecb73bcc816998255253e8ff1c62b72d 360 Pfam PF00557 Metallopeptidase family M24 139 340 6.3E-64 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK43_RS03455 ecb73bcc816998255253e8ff1c62b72d 360 Gene3D G3DSA:3.90.230.10 129 358 9.6E-81 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK43_RS03455 ecb73bcc816998255253e8ff1c62b72d 360 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 130 2.6E-22 T 22-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 AMK43_RS03455 ecb73bcc816998255253e8ff1c62b72d 360 PANTHER PTHR10804:SF110 114 358 2.6E-83 T 22-04-2016 AMK43_RS03455 ecb73bcc816998255253e8ff1c62b72d 360 SUPERFAMILY SSF53092 1 129 9.24E-22 T 22-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal AMK43_RS03455 ecb73bcc816998255253e8ff1c62b72d 360 Gene3D G3DSA:3.40.350.10 1 128 4.3E-22 T 22-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 Gene3D G3DSA:3.60.21.10 357 377 1.8E-80 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 Gene3D G3DSA:3.60.21.10 33 322 1.8E-80 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 SUPERFAMILY SSF56300 37 322 1.52E-73 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 SUPERFAMILY SSF56300 357 373 1.52E-73 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 ProSitePatterns PS00786 5'-nucleotidase signature 2. 120 131 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 SUPERFAMILY SSF55816 408 595 4.58E-35 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 Gene3D G3DSA:3.90.780.10 409 595 6.3E-34 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 Pfam PF00149 Calcineurin-like phosphoesterase 39 253 3.0E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 TIGRFAM TIGR01530 nadN: NAD nucleotidase 38 582 1.5E-210 T 22-04-2016 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN GO:0008253|GO:0009166 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 PRINTS PR01607 Apyrase family signature 446 469 1.2E-23 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 PRINTS PR01607 Apyrase family signature 237 260 1.2E-23 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 PRINTS PR01607 Apyrase family signature 283 303 1.2E-23 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 PRINTS PR01607 Apyrase family signature 36 54 1.2E-23 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 PRINTS PR01607 Apyrase family signature 528 547 1.2E-23 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 PRINTS PR01607 Apyrase family signature 218 235 1.2E-23 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 PANTHER PTHR11575:SF27 325 595 1.9E-130 T 22-04-2016 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 PANTHER PTHR11575:SF27 1 306 1.9E-130 T 22-04-2016 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 PANTHER PTHR11575 325 595 1.9E-130 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 PANTHER PTHR11575 1 306 1.9E-130 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 AMK43_RS10635 c6ab415880bf8c60e35d0cf33237160f 597 Pfam PF02872 5'-nucleotidase, C-terminal domain 405 553 3.6E-24 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 Pfam PF00702 haloacid dehalogenase-like hydrolase 410 628 3.8E-32 T 22-04-2016 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 Gene3D G3DSA:2.70.150.10 215 322 1.3E-23 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 Gene3D G3DSA:3.40.1110.10 429 540 6.9E-14 T 22-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 PANTHER PTHR24093:SF50 35 724 6.6E-141 T 22-04-2016 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 ProSitePatterns PS01229 Hypothetical cof family signature 2. 614 636 - T 22-04-2016 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 549 2.0E-28 T 22-04-2016 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 561 571 2.0E-28 T 22-04-2016 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 413 427 2.0E-28 T 22-04-2016 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 614 633 2.0E-28 T 22-04-2016 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 271 285 2.0E-28 T 22-04-2016 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 638 650 2.0E-28 T 22-04-2016 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 415 421 - T 22-04-2016 IPR018303 P-type ATPase, phosphorylation site AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 SUPERFAMILY SSF56784 411 431 2.2E-47 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 SUPERFAMILY SSF56784 471 715 2.2E-47 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 SUPERFAMILY SSF81653 226 321 1.44E-22 T 22-04-2016 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 171 717 2.5E-170 T 22-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 Pfam PF00122 E1-E2 ATPase 192 404 6.6E-50 T 22-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 Gene3D G3DSA:3.40.50.1000 541 682 8.0E-40 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 Gene3D G3DSA:3.40.50.1000 387 428 8.0E-40 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 PANTHER PTHR24093 35 724 6.6E-141 T 22-04-2016 AMK43_RS05480 4b43267df010090a3324665791ec4f06 724 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 194 694 3.2E-64 T 22-04-2016 IPR001757 P-type ATPase GO:0016021 AMK43_RS10565 492cc21675c13aed4d21b569d85859a4 231 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 197 7.0E-49 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMK43_RS10565 492cc21675c13aed4d21b569d85859a4 231 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 208 26.057 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMK43_RS10565 492cc21675c13aed4d21b569d85859a4 231 PIRSF PIRSF003078 2 214 2.1E-49 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMK43_RS10565 492cc21675c13aed4d21b569d85859a4 231 Pfam PF02527 rRNA small subunit methyltransferase G 21 198 6.6E-49 T 22-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 AMK43_RS10565 492cc21675c13aed4d21b569d85859a4 231 PANTHER PTHR31760 1 231 1.6E-74 T 22-04-2016 AMK43_RS10565 492cc21675c13aed4d21b569d85859a4 231 PANTHER PTHR31760:SF0 1 231 1.6E-74 T 22-04-2016 AMK43_RS10565 492cc21675c13aed4d21b569d85859a4 231 Gene3D G3DSA:3.40.50.150 3 231 3.5E-67 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS10565 492cc21675c13aed4d21b569d85859a4 231 SUPERFAMILY SSF53335 3 231 5.42E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS08045 ed6f16dbd70f693beac7c49cfb26a8d0 424 Gene3D G3DSA:3.40.50.2000 6 137 1.6E-9 T 22-04-2016 AMK43_RS08045 ed6f16dbd70f693beac7c49cfb26a8d0 424 Gene3D G3DSA:3.40.50.2000 254 375 8.7E-14 T 22-04-2016 AMK43_RS08045 ed6f16dbd70f693beac7c49cfb26a8d0 424 SUPERFAMILY SSF53756 9 420 4.28E-41 T 22-04-2016 AMK43_RS08045 ed6f16dbd70f693beac7c49cfb26a8d0 424 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 287 393 5.5E-7 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 Gene3D G3DSA:3.30.1330.90 320 449 1.8E-37 T 22-04-2016 IPR029009 Allosteric substrate binding domain AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 282 7.7E-55 T 22-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 Pfam PF01842 ACT domain 459 517 7.2E-9 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 144 171 - T 22-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 PANTHER PTHR10996:SF20 1 358 6.3E-140 T 22-04-2016 AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 SUPERFAMILY SSF52283 1 134 1.04E-32 T 22-04-2016 AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 PANTHER PTHR10996 1 358 6.3E-140 T 22-04-2016 AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 314 9.5E-32 T 22-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 SUPERFAMILY SSF143548 321 452 1.78E-29 T 22-04-2016 IPR029009 Allosteric substrate binding domain AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 Gene3D G3DSA:3.30.70.260 450 525 2.3E-18 T 22-04-2016 AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 Gene3D G3DSA:3.40.50.720 118 283 1.3E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 SUPERFAMILY SSF51735 101 283 2.19E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 Gene3D G3DSA:3.40.50.720 1 117 1.6E-37 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 SUPERFAMILY SSF55021 447 526 4.58E-14 T 22-04-2016 AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 193 215 - T 22-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site AMK43_RS05830 8b32c49210781a41f17a2bd53c5250db 530 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 528 2.2E-185 T 22-04-2016 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 AMK43_RS01110 5dbf94af1949358315725e2cc7d1b1c2 247 Pfam PF07722 Peptidase C26 5 222 2.4E-72 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 AMK43_RS01110 5dbf94af1949358315725e2cc7d1b1c2 247 PANTHER PTHR11922 27 244 2.5E-59 T 22-04-2016 AMK43_RS01110 5dbf94af1949358315725e2cc7d1b1c2 247 SUPERFAMILY SSF52317 27 243 1.54E-41 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS01110 5dbf94af1949358315725e2cc7d1b1c2 247 Gene3D G3DSA:3.40.50.880 3 244 3.4E-57 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS01110 5dbf94af1949358315725e2cc7d1b1c2 247 PANTHER PTHR11922:SF18 27 244 2.5E-59 T 22-04-2016 AMK43_RS06655 e0ff18c9cf3c6638ea76dca3d8db03ae 363 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMK43_RS06655 e0ff18c9cf3c6638ea76dca3d8db03ae 363 Gene3D G3DSA:3.40.1190.20 59 361 5.9E-57 T 22-04-2016 IPR029056 Ribokinase-like AMK43_RS06655 e0ff18c9cf3c6638ea76dca3d8db03ae 363 PANTHER PTHR10584 41 363 5.4E-74 T 22-04-2016 AMK43_RS06655 e0ff18c9cf3c6638ea76dca3d8db03ae 363 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 6.4E-9 T 22-04-2016 AMK43_RS06655 e0ff18c9cf3c6638ea76dca3d8db03ae 363 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 302 315 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMK43_RS06655 e0ff18c9cf3c6638ea76dca3d8db03ae 363 SUPERFAMILY SSF46785 1 55 8.01E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS06655 e0ff18c9cf3c6638ea76dca3d8db03ae 363 SUPERFAMILY SSF53613 60 359 1.47E-53 T 22-04-2016 IPR029056 Ribokinase-like AMK43_RS06655 e0ff18c9cf3c6638ea76dca3d8db03ae 363 Gene3D G3DSA:1.10.10.10 1 58 1.4E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS06655 e0ff18c9cf3c6638ea76dca3d8db03ae 363 Pfam PF00294 pfkB family carbohydrate kinase 59 338 4.6E-42 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB AMK43_RS06655 e0ff18c9cf3c6638ea76dca3d8db03ae 363 PANTHER PTHR10584:SF196 41 363 5.4E-74 T 22-04-2016 AMK43_RS03085 dcd5fac299b8818825ef85348e2a76e9 529 PANTHER PTHR41695 1 527 2.3E-144 T 22-04-2016 AMK43_RS03085 dcd5fac299b8818825ef85348e2a76e9 529 Pfam PF09210 Domain of unknown function (DUF1957) 424 524 1.3E-35 T 22-04-2016 IPR015293 Domain of unknown function DUF1957 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AMK43_RS03085 dcd5fac299b8818825ef85348e2a76e9 529 Gene3D G3DSA:3.20.110.10 2 413 2.6E-133 T 22-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain AMK43_RS03085 dcd5fac299b8818825ef85348e2a76e9 529 SUPERFAMILY SSF88688 417 525 1.77E-35 T 22-04-2016 IPR028995 Glycoside hydrolase families 57/38, central domain AMK43_RS03085 dcd5fac299b8818825ef85348e2a76e9 529 Gene3D G3DSA:1.20.1430.10 415 526 7.6E-37 T 22-04-2016 IPR015293 Domain of unknown function DUF1957 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 AMK43_RS03085 dcd5fac299b8818825ef85348e2a76e9 529 SUPERFAMILY SSF88713 3 413 2.45E-107 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK43_RS03085 dcd5fac299b8818825ef85348e2a76e9 529 Pfam PF03065 Glycosyl hydrolase family 57 7 363 2.5E-46 T 22-04-2016 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 AMK43_RS09150 6ca17691304731366686c63b40e2262d 380 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMK43_RS09150 6ca17691304731366686c63b40e2262d 380 SUPERFAMILY SSF53383 3 375 2.31E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS09150 6ca17691304731366686c63b40e2262d 380 PIRSF PIRSF005572 1 380 6.5E-128 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AMK43_RS09150 6ca17691304731366686c63b40e2262d 380 Gene3D G3DSA:3.90.1150.10 247 373 4.0E-40 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS09150 6ca17691304731366686c63b40e2262d 380 PANTHER PTHR11601:SF20 2 375 7.3E-147 T 22-04-2016 AMK43_RS09150 6ca17691304731366686c63b40e2262d 380 Gene3D G3DSA:3.40.640.10 17 246 1.1E-76 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS09150 6ca17691304731366686c63b40e2262d 380 PANTHER PTHR11601 2 375 7.3E-147 T 22-04-2016 AMK43_RS09150 6ca17691304731366686c63b40e2262d 380 Pfam PF00266 Aminotransferase class-V 4 366 2.0E-79 T 22-04-2016 IPR000192 Aminotransferase class V domain AMK43_RS10530 18a7b911a8b3dbcf21417a32d4749983 316 PIRSF PIRSF005261 1 316 2.7E-69 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AMK43_RS10530 18a7b911a8b3dbcf21417a32d4749983 316 PANTHER PTHR30111:SF1 251 315 6.0E-67 T 22-04-2016 AMK43_RS10530 18a7b911a8b3dbcf21417a32d4749983 316 PANTHER PTHR30111:SF1 15 235 6.0E-67 T 22-04-2016 AMK43_RS10530 18a7b911a8b3dbcf21417a32d4749983 316 Pfam PF01430 Hsp33 protein 14 308 1.7E-71 T 22-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 AMK43_RS10530 18a7b911a8b3dbcf21417a32d4749983 316 Gene3D G3DSA:3.90.1280.10 260 315 2.1E-20 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AMK43_RS10530 18a7b911a8b3dbcf21417a32d4749983 316 SUPERFAMILY SSF64397 261 270 4.05E-54 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AMK43_RS10530 18a7b911a8b3dbcf21417a32d4749983 316 SUPERFAMILY SSF64397 15 234 4.05E-54 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AMK43_RS10530 18a7b911a8b3dbcf21417a32d4749983 316 PANTHER PTHR30111 251 315 6.0E-67 T 22-04-2016 AMK43_RS10530 18a7b911a8b3dbcf21417a32d4749983 316 PANTHER PTHR30111 15 235 6.0E-67 T 22-04-2016 AMK43_RS10530 18a7b911a8b3dbcf21417a32d4749983 316 Gene3D G3DSA:3.55.30.10 7 238 1.6E-59 T 22-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 AMK43_RS10530 18a7b911a8b3dbcf21417a32d4749983 316 SUPERFAMILY SSF118352 261 315 1.7E-17 T 22-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 AMK43_RS03690 c03a9ac2d509002a41436747f04d8d37 210 Gene3D G3DSA:3.20.80.10 1 209 1.7E-89 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain AMK43_RS03690 c03a9ac2d509002a41436747f04d8d37 210 SUPERFAMILY SSF55136 128 210 1.39E-7 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain AMK43_RS03690 c03a9ac2d509002a41436747f04d8d37 210 PIRSF PIRSF031644 1 210 8.3E-77 T 22-04-2016 IPR008319 Uncharacterised conserved protein UCP031644 AMK43_RS03690 c03a9ac2d509002a41436747f04d8d37 210 Pfam PF06445 GyrI-like small molecule binding domain 18 205 4.4E-27 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain AMK43_RS10060 eefccd0b0ed9b82cd3eaf394121498e2 335 Pfam PF01515 Phosphate acetyl/butaryl transferase 5 329 2.3E-118 T 22-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AMK43_RS10060 eefccd0b0ed9b82cd3eaf394121498e2 335 SUPERFAMILY SSF53659 6 332 2.3E-92 T 22-04-2016 AMK43_RS10060 eefccd0b0ed9b82cd3eaf394121498e2 335 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 19 329 4.4E-109 T 22-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AMK43_RS10060 eefccd0b0ed9b82cd3eaf394121498e2 335 Gene3D G3DSA:3.40.50.10750 141 305 9.3E-63 T 22-04-2016 AMK43_RS10060 eefccd0b0ed9b82cd3eaf394121498e2 335 PANTHER PTHR23406:SF3 235 334 1.5E-48 T 22-04-2016 AMK43_RS10060 eefccd0b0ed9b82cd3eaf394121498e2 335 PIRSF PIRSF000428 1 335 9.5E-108 T 22-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 AMK43_RS10060 eefccd0b0ed9b82cd3eaf394121498e2 335 PANTHER PTHR23406 235 334 1.5E-48 T 22-04-2016 AMK43_RS05460 eafb9a007db44c8cdc430e1f8d80e00d 357 Gene3D G3DSA:3.40.1700.10 21 143 1.6E-30 T 22-04-2016 AMK43_RS05460 eafb9a007db44c8cdc430e1f8d80e00d 357 Gene3D G3DSA:1.10.150.20 293 345 1.9E-4 T 22-04-2016 AMK43_RS05460 eafb9a007db44c8cdc430e1f8d80e00d 357 SUPERFAMILY SSF47781 286 345 6.3E-6 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK43_RS05460 eafb9a007db44c8cdc430e1f8d80e00d 357 Pfam PF10635 DisA bacterial checkpoint controller linker region 144 278 1.5E-33 T 22-04-2016 IPR018906 DNA integrity scanning, DisA, linker region AMK43_RS05460 eafb9a007db44c8cdc430e1f8d80e00d 357 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 27 139 3.9E-27 T 22-04-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal AMK43_RS05460 eafb9a007db44c8cdc430e1f8d80e00d 357 SUPERFAMILY SSF143597 17 143 1.57E-28 T 22-04-2016 AMK43_RS00085 f2f42a5e89df29644ef19c7f7703e83e 242 Gene3D G3DSA:2.30.30.100 191 233 1.6E-7 T 22-04-2016 AMK43_RS00085 f2f42a5e89df29644ef19c7f7703e83e 242 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 3 234 5.5E-44 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 AMK43_RS00085 f2f42a5e89df29644ef19c7f7703e83e 242 PANTHER PTHR12835 1 233 1.1E-48 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 AMK43_RS00085 f2f42a5e89df29644ef19c7f7703e83e 242 SUPERFAMILY SSF55681 2 184 7.46E-38 T 22-04-2016 AMK43_RS00085 f2f42a5e89df29644ef19c7f7703e83e 242 Pfam PF03099 Biotin/lipoate A/B protein ligase family 9 129 7.7E-14 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AMK43_RS00085 f2f42a5e89df29644ef19c7f7703e83e 242 Gene3D G3DSA:3.30.930.10 2 181 2.2E-42 T 22-04-2016 AMK43_RS09770 ccc30cc0db8a721e951cd4ae94681043 431 Gene3D G3DSA:1.20.1250.20 228 422 2.4E-23 T 22-04-2016 AMK43_RS09770 ccc30cc0db8a721e951cd4ae94681043 431 Pfam PF07690 Major Facilitator Superfamily 27 379 1.4E-42 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK43_RS09770 ccc30cc0db8a721e951cd4ae94681043 431 SUPERFAMILY SSF103473 13 418 1.19E-74 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK43_RS09770 ccc30cc0db8a721e951cd4ae94681043 431 PANTHER PTHR23512:SF1 14 429 1.0E-84 T 22-04-2016 AMK43_RS09770 ccc30cc0db8a721e951cd4ae94681043 431 PANTHER PTHR23512 14 429 1.0E-84 T 22-04-2016 AMK43_RS09770 ccc30cc0db8a721e951cd4ae94681043 431 Gene3D G3DSA:1.20.1250.20 17 208 9.5E-36 T 22-04-2016 AMK43_RS09770 ccc30cc0db8a721e951cd4ae94681043 431 PIRSF PIRSF002808 1 431 4.6E-43 T 22-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 AMK43_RS11425 a2df8bf74bc2b231d23e881aa97ab842 325 Pfam PF05258 Protein of unknown function (DUF721) 19 94 1.6E-9 T 22-04-2016 IPR007922 Protein of unknown function DUF721/UPF0232 AMK43_RS01650 264aeb26e47c7ba1b66a4f28413e3d54 221 Gene3D G3DSA:3.20.20.70 8 217 2.0E-57 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS01650 264aeb26e47c7ba1b66a4f28413e3d54 221 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 10 212 1.6E-40 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 AMK43_RS01650 264aeb26e47c7ba1b66a4f28413e3d54 221 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 7 218 30.071 T 22-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 AMK43_RS01650 264aeb26e47c7ba1b66a4f28413e3d54 221 SUPERFAMILY SSF51366 8 215 7.22E-46 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK43_RS01650 264aeb26e47c7ba1b66a4f28413e3d54 221 PANTHER PTHR22854 7 217 1.3E-39 T 22-04-2016 AMK43_RS01650 264aeb26e47c7ba1b66a4f28413e3d54 221 PANTHER PTHR22854:SF6 7 217 1.3E-39 T 22-04-2016 AMK43_RS04605 71bcdda99f1611ce0cd10a426e8b396a 290 SUPERFAMILY SSF48452 27 94 6.13E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS04605 71bcdda99f1611ce0cd10a426e8b396a 290 Gene3D G3DSA:1.25.40.10 35 96 2.1E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS10860 3f799b9e76323407d3fd509051cc4d9e 85 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 5 84 5.6E-19 T 22-04-2016 IPR003849 Preprotein translocase YajC AMK43_RS10860 3f799b9e76323407d3fd509051cc4d9e 85 Pfam PF02699 Preprotein translocase subunit 7 82 1.8E-22 T 22-04-2016 IPR003849 Preprotein translocase YajC AMK43_RS10860 3f799b9e76323407d3fd509051cc4d9e 85 PANTHER PTHR33909 1 85 1.9E-16 T 22-04-2016 AMK43_RS10860 3f799b9e76323407d3fd509051cc4d9e 85 PANTHER PTHR33909:SF1 1 85 1.9E-16 T 22-04-2016 AMK43_RS10860 3f799b9e76323407d3fd509051cc4d9e 85 SMART SM01323 2 84 6.3E-27 T 22-04-2016 IPR003849 Preprotein translocase YajC AMK43_RS10475 0a29aecc6742b6badd6cd04e8661d78a 687 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 409 483 3.8E-5 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS10475 0a29aecc6742b6badd6cd04e8661d78a 687 Pfam PF05043 Mga helix-turn-helix domain 83 161 2.0E-10 T 22-04-2016 IPR007737 Mga helix-turn-helix domain AMK43_RS10475 0a29aecc6742b6badd6cd04e8661d78a 687 PANTHER PTHR36203:SF1 1 687 1.3E-82 T 22-04-2016 AMK43_RS10475 0a29aecc6742b6badd6cd04e8661d78a 687 SUPERFAMILY SSF55804 540 680 1.01E-24 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 AMK43_RS10475 0a29aecc6742b6badd6cd04e8661d78a 687 Gene3D G3DSA:3.40.930.10 541 681 2.9E-34 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS10475 0a29aecc6742b6badd6cd04e8661d78a 687 Gene3D G3DSA:1.10.1790.10 300 397 4.2E-17 T 22-04-2016 IPR011608 PRD domain GO:0006355 AMK43_RS10475 0a29aecc6742b6badd6cd04e8661d78a 687 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 542 680 7.8E-24 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS10475 0a29aecc6742b6badd6cd04e8661d78a 687 SUPERFAMILY SSF63520 298 397 6.28E-18 T 22-04-2016 IPR011608 PRD domain GO:0006355 AMK43_RS10475 0a29aecc6742b6badd6cd04e8661d78a 687 Gene3D G3DSA:1.10.10.10 3 45 2.7E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS10475 0a29aecc6742b6badd6cd04e8661d78a 687 Gene3D G3DSA:3.40.50.270 409 484 1.7E-6 T 22-04-2016 AMK43_RS10475 0a29aecc6742b6badd6cd04e8661d78a 687 Pfam PF08280 M protein trans-acting positive regulator (MGA) HTH domain 7 53 2.8E-8 T 22-04-2016 IPR013199 M protein trans-acting positive regulator (MGA) HTH domain AMK43_RS10475 0a29aecc6742b6badd6cd04e8661d78a 687 SUPERFAMILY SSF52794 409 481 5.07E-7 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS10475 0a29aecc6742b6badd6cd04e8661d78a 687 PANTHER PTHR36203 1 687 1.3E-82 T 22-04-2016 AMK43_RS10475 0a29aecc6742b6badd6cd04e8661d78a 687 Pfam PF00874 PRD domain 304 393 1.2E-16 T 22-04-2016 IPR011608 PRD domain GO:0006355 AMK43_RS10470 7f8488e952315082e1578304db80b482 144 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 49 65 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS10470 7f8488e952315082e1578304db80b482 144 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 142 1.4E-34 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS10470 7f8488e952315082e1578304db80b482 144 Gene3D G3DSA:3.40.930.10 2 144 2.4E-40 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS10470 7f8488e952315082e1578304db80b482 144 PANTHER PTHR30505 1 144 4.9E-33 T 22-04-2016 AMK43_RS10470 7f8488e952315082e1578304db80b482 144 SUPERFAMILY SSF55804 2 143 1.07E-33 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 AMK43_RS10470 7f8488e952315082e1578304db80b482 144 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 4 129 2.2E-34 T 22-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS10470 7f8488e952315082e1578304db80b482 144 PANTHER PTHR30505:SF5 1 144 4.9E-33 T 22-04-2016 AMK43_RS01670 61d82935d99460a655bd45f10b400ef4 516 Gene3D G3DSA:3.30.1360.60 438 516 1.1E-23 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS01670 61d82935d99460a655bd45f10b400ef4 516 Pfam PF02378 Phosphotransferase system, EIIC 15 356 4.4E-54 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMK43_RS01670 61d82935d99460a655bd45f10b400ef4 516 Pfam PF00367 phosphotransferase system, EIIB 446 477 1.2E-12 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMK43_RS01670 61d82935d99460a655bd45f10b400ef4 516 PANTHER PTHR30009:SF11 8 516 1.8E-102 T 22-04-2016 AMK43_RS01670 61d82935d99460a655bd45f10b400ef4 516 SUPERFAMILY SSF55604 442 515 9.55E-19 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS01670 61d82935d99460a655bd45f10b400ef4 516 PANTHER PTHR30009 8 516 1.8E-102 T 22-04-2016 AMK43_RS00010 b10c709bf8a3933640305f77ef6fc2cf 108 Gene3D G3DSA:3.30.230.10 3 108 1.3E-27 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS00010 b10c709bf8a3933640305f77ef6fc2cf 108 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 3 107 9.7E-20 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMK43_RS00010 b10c709bf8a3933640305f77ef6fc2cf 108 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 108 12.557 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMK43_RS00010 b10c709bf8a3933640305f77ef6fc2cf 108 SUPERFAMILY SSF54211 4 108 2.23E-22 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS00010 b10c709bf8a3933640305f77ef6fc2cf 108 Pfam PF00825 Ribonuclease P 3 108 2.7E-24 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMK43_RS00010 b10c709bf8a3933640305f77ef6fc2cf 108 PANTHER PTHR33992 5 108 1.0E-20 T 22-04-2016 AMK43_RS00010 b10c709bf8a3933640305f77ef6fc2cf 108 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 103 4.0E-15 T 22-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 AMK43_RS04770 eb0704962d1b7e49e3e5f2318c26224d 334 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 1 334 4.3E-106 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK43_RS04770 eb0704962d1b7e49e3e5f2318c26224d 334 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 16 27 - T 22-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK43_RS04770 eb0704962d1b7e49e3e5f2318c26224d 334 SUPERFAMILY SSF102114 3 312 4.97E-72 T 22-04-2016 AMK43_RS04770 eb0704962d1b7e49e3e5f2318c26224d 334 SMART SM00729 10 209 6.4E-14 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK43_RS04770 eb0704962d1b7e49e3e5f2318c26224d 334 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 1 334 36.147 T 22-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK43_RS04770 eb0704962d1b7e49e3e5f2318c26224d 334 PANTHER PTHR22960 1 306 3.1E-90 T 22-04-2016 AMK43_RS04770 eb0704962d1b7e49e3e5f2318c26224d 334 Pfam PF04055 Radical SAM superfamily 15 173 2.4E-30 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS04770 eb0704962d1b7e49e3e5f2318c26224d 334 PANTHER PTHR22960:SF10 1 306 3.1E-90 T 22-04-2016 AMK43_RS04770 eb0704962d1b7e49e3e5f2318c26224d 334 Pfam PF06463 Molybdenum Cofactor Synthesis C 179 314 5.6E-32 T 22-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 AMK43_RS04770 eb0704962d1b7e49e3e5f2318c26224d 334 Gene3D G3DSA:3.20.20.70 2 310 5.6E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS04770 eb0704962d1b7e49e3e5f2318c26224d 334 Pfam PF13394 4Fe-4S single cluster domain 17 100 1.3E-7 T 22-04-2016 AMK43_RS00700 304e8cccb5b1e985fc2c9a62495d50a6 159 Gene3D G3DSA:3.40.30.10 80 158 1.5E-15 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS00700 304e8cccb5b1e985fc2c9a62495d50a6 159 SUPERFAMILY SSF52833 10 159 6.6E-49 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS00700 304e8cccb5b1e985fc2c9a62495d50a6 159 PIRSF PIRSF000216 3 159 4.9E-51 T 22-04-2016 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 AMK43_RS00700 304e8cccb5b1e985fc2c9a62495d50a6 159 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 17 159 2.8E-47 T 22-04-2016 AMK43_RS00700 304e8cccb5b1e985fc2c9a62495d50a6 159 PANTHER PTHR10371 13 159 4.4E-52 T 22-04-2016 AMK43_RS11055 c0f87e2aebfaceb1513f7b8d09948c55 310 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 40 59 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 AMK43_RS11055 c0f87e2aebfaceb1513f7b8d09948c55 310 PIRSF PIRSF000164 1 308 4.3E-62 T 22-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 AMK43_RS11055 c0f87e2aebfaceb1513f7b8d09948c55 310 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 305 3.5E-51 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AMK43_RS11055 c0f87e2aebfaceb1513f7b8d09948c55 310 SUPERFAMILY SSF51395 3 307 5.5E-67 T 22-04-2016 AMK43_RS11055 c0f87e2aebfaceb1513f7b8d09948c55 310 Gene3D G3DSA:3.20.20.70 2 307 2.5E-73 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS11055 c0f87e2aebfaceb1513f7b8d09948c55 310 PANTHER PTHR11938 34 306 1.9E-154 T 22-04-2016 AMK43_RS11055 c0f87e2aebfaceb1513f7b8d09948c55 310 Pfam PF01180 Dihydroorotate dehydrogenase 5 292 6.6E-76 T 22-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 AMK43_RS11055 c0f87e2aebfaceb1513f7b8d09948c55 310 PANTHER PTHR11938:SF106 34 306 1.9E-154 T 22-04-2016 AMK43_RS11055 c0f87e2aebfaceb1513f7b8d09948c55 310 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 307 28.234 T 22-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 AMK43_RS11055 c0f87e2aebfaceb1513f7b8d09948c55 310 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 244 264 - T 22-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 Pfam PF03144 Elongation factor Tu domain 2 194 260 2.2E-9 T 22-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 4 617 3.3E-103 T 22-04-2016 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 PANTHER PTHR23115:SF129 432 599 4.7E-125 T 22-04-2016 AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 PANTHER PTHR23115:SF129 4 367 4.7E-125 T 22-04-2016 AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 SUPERFAMILY SSF50465 266 364 2.4E-25 T 22-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 Gene3D G3DSA:2.40.30.10 178 303 2.0E-28 T 22-04-2016 AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 Pfam PF09106 Elongation factor SelB, winged helix 448 499 5.6E-12 T 22-04-2016 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 PANTHER PTHR23115 432 599 4.7E-125 T 22-04-2016 AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 PANTHER PTHR23115 4 367 4.7E-125 T 22-04-2016 AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 164 6.0E-13 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 SUPERFAMILY SSF52540 4 167 1.31E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 PRINTS PR00315 GTP-binding elongation factor signature 57 67 1.3E-5 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 PRINTS PR00315 GTP-binding elongation factor signature 5 18 1.3E-5 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 PRINTS PR00315 GTP-binding elongation factor signature 110 119 1.3E-5 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 Gene3D G3DSA:1.10.10.10 437 499 1.8E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 Pfam PF09107 Elongation factor SelB, winged helix 578 622 5.4E-18 T 22-04-2016 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 Gene3D G3DSA:1.10.10.10 568 622 1.7E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 SUPERFAMILY SSF46785 573 622 1.56E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 Gene3D G3DSA:3.40.50.300 4 173 2.0E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 Gene3D G3DSA:1.10.10.10 510 562 5.6E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 29 44 - T 22-04-2016 IPR031157 Tr-type G domain, conserved site AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 SUPERFAMILY SSF46785 438 506 1.9E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 SUPERFAMILY SSF50447 178 266 1.85E-23 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK43_RS09515 59f63b9d3c78985fe320b0602d1c1bdc 627 Pfam PF00009 Elongation factor Tu GTP binding domain 4 167 2.0E-31 T 22-04-2016 AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 Pfam PF04851 Type III restriction enzyme, res subunit 9 137 2.6E-12 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 Gene3D G3DSA:3.30.2060.10 165 228 1.0E-8 T 22-04-2016 AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 Pfam PF00271 Helicase conserved C-terminal domain 428 541 6.2E-20 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 SMART SM00490 456 542 3.4E-19 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 Hamap MF_00204 UvrABC system protein B [uvrB]. 1 653 42.298 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 Gene3D G3DSA:3.40.50.300 419 576 2.2E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 3 651 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 Gene3D G3DSA:3.40.50.300 384 403 1.6E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 Gene3D G3DSA:3.40.50.300 229 334 1.6E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 Gene3D G3DSA:3.40.50.300 4 150 2.0E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 Gene3D G3DSA:4.10.860.10 614 655 1.6E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 Pfam PF12344 Ultra-violet resistance protein B 548 589 8.2E-19 T 22-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 SUPERFAMILY SSF52540 32 80 1.74E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 SUPERFAMILY SSF52540 455 579 1.74E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 Pfam PF02151 UvrB/uvrC motif 618 652 5.2E-6 T 22-04-2016 IPR001943 UVR domain GO:0005515 AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 SMART SM00487 7 422 6.1E-30 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 SUPERFAMILY SSF52540 3 411 6.07E-126 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 SUPERFAMILY SSF46600 613 654 4.71E-8 T 22-04-2016 IPR001943 UVR domain GO:0005515 AMK43_RS02850 6947b8670c98626952c76f784ecb63cf 657 PANTHER PTHR24029 1 657 0.0 T 22-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 AMK43_RS09815 c17e317e0d7ada8a16a36ece2aee5fe3 180 Pfam PF02525 Flavodoxin-like fold 1 174 5.3E-37 T 22-04-2016 IPR003680 Flavodoxin-like fold AMK43_RS09815 c17e317e0d7ada8a16a36ece2aee5fe3 180 SUPERFAMILY SSF52218 1 176 5.14E-43 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS09815 c17e317e0d7ada8a16a36ece2aee5fe3 180 PANTHER PTHR10204 1 180 8.3E-57 T 22-04-2016 AMK43_RS09815 c17e317e0d7ada8a16a36ece2aee5fe3 180 Gene3D G3DSA:3.40.50.360 1 177 2.6E-41 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS09815 c17e317e0d7ada8a16a36ece2aee5fe3 180 PANTHER PTHR10204:SF42 1 180 8.3E-57 T 22-04-2016 AMK43_RS06160 c6a45440c1e972af11b244ec036ccb68 225 SMART SM00448 1 111 0.0039 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS06160 c6a45440c1e972af11b244ec036ccb68 225 PANTHER PTHR26402:SF578 1 225 3.5E-43 T 22-04-2016 AMK43_RS06160 c6a45440c1e972af11b244ec036ccb68 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 222 7.3E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK43_RS06160 c6a45440c1e972af11b244ec036ccb68 225 Gene3D G3DSA:1.10.10.10 126 223 2.0E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS06160 c6a45440c1e972af11b244ec036ccb68 225 PANTHER PTHR26402 1 225 3.5E-43 T 22-04-2016 AMK43_RS06160 c6a45440c1e972af11b244ec036ccb68 225 Gene3D G3DSA:3.40.50.2300 1 121 5.4E-13 T 22-04-2016 AMK43_RS06160 c6a45440c1e972af11b244ec036ccb68 225 SUPERFAMILY SSF46894 124 223 4.25E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK43_RS06160 c6a45440c1e972af11b244ec036ccb68 225 Pfam PF00072 Response regulator receiver domain 3 111 1.4E-5 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS06160 c6a45440c1e972af11b244ec036ccb68 225 SMART SM00862 148 223 4.1E-21 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK43_RS06160 c6a45440c1e972af11b244ec036ccb68 225 SUPERFAMILY SSF52172 1 178 1.01E-11 T 22-04-2016 IPR011006 CheY-like superfamily AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PIRSF PIRSF016599 1 478 1.0E-177 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 Pfam PF01546 Peptidase family M20/M25/M40 73 475 9.5E-19 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PANTHER PTHR11014:SF54 203 290 5.8E-138 T 22-04-2016 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PANTHER PTHR11014 203 290 5.8E-138 T 22-04-2016 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PRINTS PR00934 X-His dipeptidase (M25) signature 445 467 1.1E-53 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 1.1E-53 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PRINTS PR00934 X-His dipeptidase (M25) signature 423 439 1.1E-53 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PRINTS PR00934 X-His dipeptidase (M25) signature 205 222 1.1E-53 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PRINTS PR00934 X-His dipeptidase (M25) signature 250 269 1.1E-53 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 1.1E-53 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 1.1E-53 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 1.1E-53 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 Pfam PF07687 Peptidase dimerisation domain 213 289 7.3E-5 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PANTHER PTHR11014:SF54 378 477 5.8E-138 T 22-04-2016 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PANTHER PTHR11014:SF54 6 185 5.8E-138 T 22-04-2016 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PANTHER PTHR11014 378 477 5.8E-138 T 22-04-2016 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 PANTHER PTHR11014 6 185 5.8E-138 T 22-04-2016 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 SUPERFAMILY SSF53187 10 182 5.14E-56 T 22-04-2016 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 SUPERFAMILY SSF53187 392 477 5.14E-56 T 22-04-2016 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 Gene3D G3DSA:3.40.630.10 392 477 3.1E-93 T 22-04-2016 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 Gene3D G3DSA:3.40.630.10 3 181 3.1E-93 T 22-04-2016 AMK43_RS05650 985bf2b931159106efb74e0876cef51a 478 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 7 478 3.6E-182 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS02510 89a9b03e15f7e05d31ee6771fc9a61fd 505 PANTHER PTHR30175:SF3 117 502 5.9E-70 T 22-04-2016 AMK43_RS02510 89a9b03e15f7e05d31ee6771fc9a61fd 505 PANTHER PTHR30175:SF3 5 79 5.9E-70 T 22-04-2016 AMK43_RS02510 89a9b03e15f7e05d31ee6771fc9a61fd 505 Gene3D G3DSA:3.30.1360.60 2 82 1.9E-5 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS02510 89a9b03e15f7e05d31ee6771fc9a61fd 505 PANTHER PTHR30175 117 502 5.9E-70 T 22-04-2016 AMK43_RS02510 89a9b03e15f7e05d31ee6771fc9a61fd 505 PANTHER PTHR30175 5 79 5.9E-70 T 22-04-2016 AMK43_RS02510 89a9b03e15f7e05d31ee6771fc9a61fd 505 SUPERFAMILY SSF55604 6 67 3.53E-5 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS02510 89a9b03e15f7e05d31ee6771fc9a61fd 505 Pfam PF02378 Phosphotransferase system, EIIC 151 437 8.5E-25 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 Pfam PF02559 CarD-like/TRCF domain 366 452 1.0E-21 T 22-04-2016 IPR003711 CarD-like/TRCF domain AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 SMART SM01058 362 454 1.6E-28 T 22-04-2016 IPR003711 CarD-like/TRCF domain AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 SMART SM00487 478 667 1.8E-34 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 Pfam PF00271 Helicase conserved C-terminal domain 681 787 2.8E-16 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 SMART SM00490 707 788 4.6E-15 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 SUPERFAMILY SSF52540 503 555 2.28E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 SUPERFAMILY SSF52540 706 860 2.28E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 SUPERFAMILY SSF52540 428 661 5.53E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 Gene3D G3DSA:3.40.50.300 467 662 9.2E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 SUPERFAMILY SSF52540 35 205 2.12E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 Pfam PF00270 DEAD/DEAH box helicase 484 641 7.5E-19 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 SUPERFAMILY SSF141259 355 425 3.27E-14 T 22-04-2016 IPR003711 CarD-like/TRCF domain AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 SMART SM00982 880 977 1.3E-14 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 Gene3D G3DSA:3.30.2060.10 117 195 1.9E-15 T 22-04-2016 AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 1 962 24.555 T 22-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 Pfam PF03461 TRCF domain 884 969 5.5E-19 T 22-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 SUPERFAMILY SSF143517 865 971 5.89E-21 T 22-04-2016 AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 Gene3D G3DSA:3.40.50.300 663 840 1.0E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 PANTHER PTHR14025 275 966 1.7E-267 T 22-04-2016 AMK43_RS11235 fd4027f045f97946cdaa58c079c9ff34 1022 PANTHER PTHR14025:SF21 275 966 1.7E-267 T 22-04-2016 AMK43_RS07785 feacf959915e0bb4f40ac6a5971a76e8 1981 Pfam PF03797 Autotransporter beta-domain 1699 1967 8.6E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS07785 feacf959915e0bb4f40ac6a5971a76e8 1981 SMART SM00869 1698 1973 3.1E-10 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS07785 feacf959915e0bb4f40ac6a5971a76e8 1981 Gene3D G3DSA:2.40.128.130 1662 1978 6.9E-28 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS07785 feacf959915e0bb4f40ac6a5971a76e8 1981 SUPERFAMILY SSF103515 1665 1978 1.06E-21 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS10715 bb69a49a241701a675bc6f2733e8cc27 451 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 2 434 25.016 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS10715 bb69a49a241701a675bc6f2733e8cc27 451 SUPERFAMILY SSF53697 6 444 2.23E-136 T 22-04-2016 AMK43_RS10715 bb69a49a241701a675bc6f2733e8cc27 451 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 407 424 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS10715 bb69a49a241701a675bc6f2733e8cc27 451 PANTHER PTHR11469 55 442 1.9E-155 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS10715 bb69a49a241701a675bc6f2733e8cc27 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 272 293 7.2E-27 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS10715 bb69a49a241701a675bc6f2733e8cc27 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 75 94 7.2E-27 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS10715 bb69a49a241701a675bc6f2733e8cc27 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 407 420 7.2E-27 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS10715 bb69a49a241701a675bc6f2733e8cc27 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 393 407 7.2E-27 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS10715 bb69a49a241701a675bc6f2733e8cc27 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 375 393 7.2E-27 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS10715 bb69a49a241701a675bc6f2733e8cc27 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 197 215 7.2E-27 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS10715 bb69a49a241701a675bc6f2733e8cc27 451 Gene3D G3DSA:3.40.50.10490 67 198 1.7E-27 T 22-04-2016 AMK43_RS10715 bb69a49a241701a675bc6f2733e8cc27 451 Gene3D G3DSA:3.40.50.10490 199 416 9.2E-90 T 22-04-2016 AMK43_RS10715 bb69a49a241701a675bc6f2733e8cc27 451 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 201 214 - T 22-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS10715 bb69a49a241701a675bc6f2733e8cc27 451 Pfam PF00342 Phosphoglucose isomerase 75 424 5.8E-23 T 22-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS10405 25ac8f29e44920a15ffdc123a1139c75 242 Gene3D G3DSA:1.10.260.40 8 81 5.9E-15 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS10405 25ac8f29e44920a15ffdc123a1139c75 242 PANTHER PTHR10245 1 90 8.8E-12 T 22-04-2016 AMK43_RS10405 25ac8f29e44920a15ffdc123a1139c75 242 Pfam PF01381 Helix-turn-helix 17 71 1.1E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK43_RS10405 25ac8f29e44920a15ffdc123a1139c75 242 SUPERFAMILY SSF47413 10 72 1.61E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS10405 25ac8f29e44920a15ffdc123a1139c75 242 SMART SM00530 16 71 1.8E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK43_RS08915 1bc4c1c5c441fd346e135ae08606301d 293 SUPERFAMILY SSF46934 3 54 1.16E-20 T 22-04-2016 IPR009060 UBA-like GO:0005515 AMK43_RS08915 1bc4c1c5c441fd346e135ae08606301d 293 SUPERFAMILY SSF54713 55 145 2.83E-19 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK43_RS08915 1bc4c1c5c441fd346e135ae08606301d 293 Gene3D G3DSA:3.30.479.20 240 273 6.0E-21 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK43_RS08915 1bc4c1c5c441fd346e135ae08606301d 293 Gene3D G3DSA:3.30.479.20 151 191 6.0E-21 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK43_RS08915 1bc4c1c5c441fd346e135ae08606301d 293 Gene3D G3DSA:1.10.286.20 197 239 9.3E-20 T 22-04-2016 AMK43_RS08915 1bc4c1c5c441fd346e135ae08606301d 293 Gene3D G3DSA:3.30.479.20 56 144 1.0E-13 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK43_RS08915 1bc4c1c5c441fd346e135ae08606301d 293 PANTHER PTHR11741 1 293 2.7E-129 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AMK43_RS08915 1bc4c1c5c441fd346e135ae08606301d 293 SUPERFAMILY SSF54713 149 292 1.57E-46 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK43_RS08915 1bc4c1c5c441fd346e135ae08606301d 293 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 AMK43_RS08915 1bc4c1c5c441fd346e135ae08606301d 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 76 86 - T 22-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 AMK43_RS08915 1bc4c1c5c441fd346e135ae08606301d 293 Pfam PF00889 Elongation factor TS 72 274 1.4E-68 T 22-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 AMK43_RS08915 1bc4c1c5c441fd346e135ae08606301d 293 Gene3D G3DSA:1.10.8.10 2 54 4.2E-29 T 22-04-2016 AMK43_RS08915 1bc4c1c5c441fd346e135ae08606301d 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 291 75.325 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AMK43_RS08915 1bc4c1c5c441fd346e135ae08606301d 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 2 291 3.0E-104 T 22-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 AMK43_RS06795 2dafc235c1265622373e566a7994aeea 244 PANTHER PTHR34135:SF2 11 239 3.8E-44 T 22-04-2016 AMK43_RS06795 2dafc235c1265622373e566a7994aeea 244 SMART SM00641 41 147 6.5E-15 T 22-04-2016 IPR018077 Glycoside hydrolase, family 25 subgroup AMK43_RS06795 2dafc235c1265622373e566a7994aeea 244 Gene3D G3DSA:3.20.20.80 39 229 3.0E-49 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS06795 2dafc235c1265622373e566a7994aeea 244 Pfam PF01183 Glycosyl hydrolases family 25 45 213 2.9E-36 T 22-04-2016 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 AMK43_RS06795 2dafc235c1265622373e566a7994aeea 244 SUPERFAMILY SSF51445 39 226 5.12E-41 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS06795 2dafc235c1265622373e566a7994aeea 244 PANTHER PTHR34135 11 239 3.8E-44 T 22-04-2016 AMK43_RS01045 4b2c64e8d0ca4aea21c354d714cc5c84 399 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 2 398 1.1E-169 T 22-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AMK43_RS01045 4b2c64e8d0ca4aea21c354d714cc5c84 399 Pfam PF00266 Aminotransferase class-V 17 386 1.2E-140 T 22-04-2016 IPR000192 Aminotransferase class V domain AMK43_RS01045 4b2c64e8d0ca4aea21c354d714cc5c84 399 SUPERFAMILY SSF53383 16 394 7.13E-115 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS01045 4b2c64e8d0ca4aea21c354d714cc5c84 399 PANTHER PTHR11601:SF17 5 397 1.6E-167 T 22-04-2016 AMK43_RS01045 4b2c64e8d0ca4aea21c354d714cc5c84 399 Gene3D G3DSA:3.90.1150.10 276 390 3.5E-24 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS01045 4b2c64e8d0ca4aea21c354d714cc5c84 399 Gene3D G3DSA:3.40.640.10 29 275 1.3E-85 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS01045 4b2c64e8d0ca4aea21c354d714cc5c84 399 PANTHER PTHR11601 5 397 1.6E-167 T 22-04-2016 AMK43_RS10540 fe0d6e365ab1047120e595e297c42acf 336 SUPERFAMILY SSF51161 32 304 2.28E-64 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK43_RS10540 fe0d6e365ab1047120e595e297c42acf 336 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 6 323 1.0E-108 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 AMK43_RS10540 fe0d6e365ab1047120e595e297c42acf 336 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 262 290 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK43_RS10540 fe0d6e365ab1047120e595e297c42acf 336 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 7 320 30.048 T 22-04-2016 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 UniPathway: UPA00973 AMK43_RS10540 fe0d6e365ab1047120e595e297c42acf 336 Gene3D G3DSA:2.160.10.10 110 302 2.5E-45 T 22-04-2016 AMK43_RS10540 fe0d6e365ab1047120e595e297c42acf 336 PANTHER PTHR22572:SF117 103 290 1.2E-53 T 22-04-2016 AMK43_RS10540 fe0d6e365ab1047120e595e297c42acf 336 PANTHER PTHR22572 103 290 1.2E-53 T 22-04-2016 AMK43_RS10540 fe0d6e365ab1047120e595e297c42acf 336 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 140 174 4.0E-9 T 22-04-2016 IPR001451 Hexapeptide repeat AMK43_RS10540 fe0d6e365ab1047120e595e297c42acf 336 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 116 137 2.4E-5 T 22-04-2016 IPR001451 Hexapeptide repeat AMK43_RS10540 fe0d6e365ab1047120e595e297c42acf 336 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 217 252 1.0E-4 T 22-04-2016 IPR001451 Hexapeptide repeat AMK43_RS10540 fe0d6e365ab1047120e595e297c42acf 336 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 253 288 4.0E-4 T 22-04-2016 IPR001451 Hexapeptide repeat AMK43_RS10540 fe0d6e365ab1047120e595e297c42acf 336 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 25 87 5.6E-10 T 22-04-2016 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 UniPathway: UPA00973 AMK43_RS06675 682d42833e00e2be0965281089e9a924 196 Pfam PF13662 Toprim domain 77 168 2.9E-25 T 22-04-2016 IPR006171 Toprim domain AMK43_RS06675 682d42833e00e2be0965281089e9a924 196 SUPERFAMILY SSF111304 2 195 4.71E-71 T 22-04-2016 IPR023627 Recombination protein RecR AMK43_RS06675 682d42833e00e2be0965281089e9a924 196 Gene3D G3DSA:3.40.50.140 88 164 8.9E-5 T 22-04-2016 IPR006171 Toprim domain AMK43_RS06675 682d42833e00e2be0965281089e9a924 196 PANTHER PTHR30446:SF0 2 196 4.4E-95 T 22-04-2016 AMK43_RS06675 682d42833e00e2be0965281089e9a924 196 TIGRFAM TIGR00615 recR: recombination protein RecR 2 193 1.1E-75 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMK43_RS06675 682d42833e00e2be0965281089e9a924 196 PANTHER PTHR30446 2 196 4.4E-95 T 22-04-2016 AMK43_RS06675 682d42833e00e2be0965281089e9a924 196 Pfam PF02132 RecR protein 37 75 1.2E-13 T 22-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger AMK43_RS06675 682d42833e00e2be0965281089e9a924 196 SMART SM00493 77 162 7.6E-11 T 22-04-2016 IPR006171 Toprim domain AMK43_RS06675 682d42833e00e2be0965281089e9a924 196 ProSitePatterns PS01300 RecR protein signature. 54 75 - T 22-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 AMK43_RS06675 682d42833e00e2be0965281089e9a924 196 Hamap MF_00017 Recombination protein RecR [recR]. 1 195 88.545 T 22-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 AMK43_RS11115 d2bbf5bf6024dd90d99aae96f9b26101 339 SUPERFAMILY SSF51735 1 333 1.15E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS11115 d2bbf5bf6024dd90d99aae96f9b26101 339 PANTHER PTHR10366:SF466 290 329 1.2E-61 T 22-04-2016 AMK43_RS11115 d2bbf5bf6024dd90d99aae96f9b26101 339 PANTHER PTHR10366:SF466 2 271 1.2E-61 T 22-04-2016 AMK43_RS11115 d2bbf5bf6024dd90d99aae96f9b26101 339 Gene3D G3DSA:3.40.50.720 1 177 3.9E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS11115 d2bbf5bf6024dd90d99aae96f9b26101 339 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 229 2.4E-44 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK43_RS11115 d2bbf5bf6024dd90d99aae96f9b26101 339 Gene3D G3DSA:3.90.25.10 178 332 3.3E-15 T 22-04-2016 AMK43_RS11115 d2bbf5bf6024dd90d99aae96f9b26101 339 PANTHER PTHR10366 290 329 1.2E-61 T 22-04-2016 AMK43_RS11115 d2bbf5bf6024dd90d99aae96f9b26101 339 PANTHER PTHR10366 2 271 1.2E-61 T 22-04-2016 AMK43_RS07890 4024545b8b5203efa4654a73e09751f1 367 PANTHER PTHR30474 1 367 5.6E-132 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AMK43_RS07890 4024545b8b5203efa4654a73e09751f1 367 Pfam PF01098 Cell cycle protein 15 365 5.5E-98 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AMK43_RS07890 4024545b8b5203efa4654a73e09751f1 367 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 19 365 9.3E-119 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AMK43_RS07890 4024545b8b5203efa4654a73e09751f1 367 PANTHER PTHR30474:SF1 1 367 5.6E-132 T 22-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 AMK43_RS09640 d2af1a835cb4a312230ab29f422d8e75 227 Pfam PF00072 Response regulator receiver domain 4 113 2.5E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS09640 d2af1a835cb4a312230ab29f422d8e75 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 1.6E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK43_RS09640 d2af1a835cb4a312230ab29f422d8e75 227 SMART SM00448 1 112 2.2E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS09640 d2af1a835cb4a312230ab29f422d8e75 227 PANTHER PTHR26402:SF316 1 221 1.7E-97 T 22-04-2016 AMK43_RS09640 d2af1a835cb4a312230ab29f422d8e75 227 SMART SM00862 145 220 1.7E-26 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK43_RS09640 d2af1a835cb4a312230ab29f422d8e75 227 SUPERFAMILY SSF52172 1 118 1.85E-39 T 22-04-2016 IPR011006 CheY-like superfamily AMK43_RS09640 d2af1a835cb4a312230ab29f422d8e75 227 Gene3D G3DSA:1.10.10.10 123 221 7.0E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09640 d2af1a835cb4a312230ab29f422d8e75 227 Gene3D G3DSA:3.40.50.2300 1 121 7.4E-41 T 22-04-2016 AMK43_RS09640 d2af1a835cb4a312230ab29f422d8e75 227 PANTHER PTHR26402 1 221 1.7E-97 T 22-04-2016 AMK43_RS09640 d2af1a835cb4a312230ab29f422d8e75 227 SUPERFAMILY SSF46894 118 222 1.67E-31 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK43_RS07875 94cacd3c73223fdabbce8df0e39a0d09 318 PANTHER PTHR22855 1 314 7.5E-121 T 22-04-2016 AMK43_RS07875 94cacd3c73223fdabbce8df0e39a0d09 318 SUPERFAMILY SSF52096 5 312 2.81E-95 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS07875 94cacd3c73223fdabbce8df0e39a0d09 318 PANTHER PTHR22855:SF42 1 314 7.5E-121 T 22-04-2016 AMK43_RS07875 94cacd3c73223fdabbce8df0e39a0d09 318 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 4 144 5.3E-58 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07875 94cacd3c73223fdabbce8df0e39a0d09 318 Gene3D G3DSA:3.90.226.10 51 270 2.9E-49 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS07875 94cacd3c73223fdabbce8df0e39a0d09 318 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 4 314 9.4E-137 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07875 94cacd3c73223fdabbce8df0e39a0d09 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 149 162 5.8E-44 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07875 94cacd3c73223fdabbce8df0e39a0d09 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 109 127 5.8E-44 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07875 94cacd3c73223fdabbce8df0e39a0d09 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 165 178 5.8E-44 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07875 94cacd3c73223fdabbce8df0e39a0d09 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 130 146 5.8E-44 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07875 94cacd3c73223fdabbce8df0e39a0d09 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 193 202 5.8E-44 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07875 94cacd3c73223fdabbce8df0e39a0d09 318 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 84 95 5.8E-44 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07875 94cacd3c73223fdabbce8df0e39a0d09 318 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 312 46.082 T 22-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS06195 79bc4ff4e658e2ab714a009e9852980b 339 SUPERFAMILY SSF51735 4 185 1.06E-45 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS06195 79bc4ff4e658e2ab714a009e9852980b 339 SUPERFAMILY SSF48179 185 337 9.52E-53 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK43_RS06195 79bc4ff4e658e2ab714a009e9852980b 339 PIRSF PIRSF000114 1 338 7.8E-104 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK43_RS06195 79bc4ff4e658e2ab714a009e9852980b 339 Gene3D G3DSA:3.40.50.720 1 189 3.7E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS06195 79bc4ff4e658e2ab714a009e9852980b 339 PANTHER PTHR11728 4 338 3.1E-118 T 22-04-2016 AMK43_RS06195 79bc4ff4e658e2ab714a009e9852980b 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 328 33.118 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK43_RS06195 79bc4ff4e658e2ab714a009e9852980b 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 166 5.6E-40 T 22-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK43_RS06195 79bc4ff4e658e2ab714a009e9852980b 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 244 261 7.3E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK43_RS06195 79bc4ff4e658e2ab714a009e9852980b 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 7.3E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK43_RS06195 79bc4ff4e658e2ab714a009e9852980b 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 139 159 7.3E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK43_RS06195 79bc4ff4e658e2ab714a009e9852980b 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 179 203 7.3E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK43_RS06195 79bc4ff4e658e2ab714a009e9852980b 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 204 228 7.3E-36 T 22-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK43_RS06195 79bc4ff4e658e2ab714a009e9852980b 339 Gene3D G3DSA:1.10.1040.10 190 332 4.7E-54 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK43_RS06195 79bc4ff4e658e2ab714a009e9852980b 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 186 326 2.7E-51 T 22-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 AMK43_RS02935 115293772bf3b4cb7b36a82ad6729a54 286 PANTHER PTHR30193:SF6 1 282 6.1E-65 T 22-04-2016 AMK43_RS02935 115293772bf3b4cb7b36a82ad6729a54 286 Gene3D G3DSA:1.10.3720.10 2 278 3.9E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS02935 115293772bf3b4cb7b36a82ad6729a54 286 PANTHER PTHR30193 1 282 6.1E-65 T 22-04-2016 AMK43_RS02935 115293772bf3b4cb7b36a82ad6729a54 286 SUPERFAMILY SSF161098 50 274 3.66E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS02935 115293772bf3b4cb7b36a82ad6729a54 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 275 3.1E-11 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS02345 5eb76b6e848ce46b543233e141dd9b11 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 22-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK43_RS02345 5eb76b6e848ce46b543233e141dd9b11 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 5.2E-67 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK43_RS02345 5eb76b6e848ce46b543233e141dd9b11 255 PANTHER PTHR21139 1 249 1.9E-126 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK43_RS02345 5eb76b6e848ce46b543233e141dd9b11 255 Pfam PF00121 Triosephosphate isomerase 5 247 1.1E-97 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK43_RS02345 5eb76b6e848ce46b543233e141dd9b11 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 41.357 T 22-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK43_RS02345 5eb76b6e848ce46b543233e141dd9b11 255 Gene3D G3DSA:3.20.20.70 1 249 6.5E-106 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS02345 5eb76b6e848ce46b543233e141dd9b11 255 SUPERFAMILY SSF51351 1 248 1.02E-94 T 22-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 AMK43_RS07005 841f6cf1d89242763bccc212e1960acd 275 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 69 87 1.8E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK43_RS07005 841f6cf1d89242763bccc212e1960acd 275 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 55 69 1.8E-5 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK43_RS07005 841f6cf1d89242763bccc212e1960acd 275 PANTHER PTHR30363:SF4 31 267 2.4E-73 T 22-04-2016 AMK43_RS07005 841f6cf1d89242763bccc212e1960acd 275 SUPERFAMILY SSF46785 36 90 4.92E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS07005 841f6cf1d89242763bccc212e1960acd 275 SMART SM00420 37 89 1.6E-9 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK43_RS07005 841f6cf1d89242763bccc212e1960acd 275 SUPERFAMILY SSF100950 105 263 6.49E-32 T 22-04-2016 AMK43_RS07005 841f6cf1d89242763bccc212e1960acd 275 ProSitePatterns PS00894 DeoR-type HTH domain signature. 37 71 - T 22-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 AMK43_RS07005 841f6cf1d89242763bccc212e1960acd 275 Pfam PF00455 DeoR C terminal sensor domain 106 261 1.1E-44 T 22-04-2016 IPR014036 DeoR C-terminal sensor domain AMK43_RS07005 841f6cf1d89242763bccc212e1960acd 275 Gene3D G3DSA:3.40.50.1360 116 243 2.8E-14 T 22-04-2016 AMK43_RS07005 841f6cf1d89242763bccc212e1960acd 275 Pfam PF08220 DeoR-like helix-turn-helix domain 37 88 2.7E-12 T 22-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 AMK43_RS07005 841f6cf1d89242763bccc212e1960acd 275 SMART SM01134 104 263 2.9E-55 T 22-04-2016 AMK43_RS07005 841f6cf1d89242763bccc212e1960acd 275 Gene3D G3DSA:1.10.10.10 39 115 1.9E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS07005 841f6cf1d89242763bccc212e1960acd 275 PANTHER PTHR30363 31 267 2.4E-73 T 22-04-2016 AMK43_RS07155 ebec6bae03b4d37cd56d9c5cfc6d7f0f 510 SUPERFAMILY SSF56024 294 497 4.71E-40 T 22-04-2016 AMK43_RS07155 ebec6bae03b4d37cd56d9c5cfc6d7f0f 510 SMART SM00155 423 450 0.62 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 AMK43_RS07155 ebec6bae03b4d37cd56d9c5cfc6d7f0f 510 SMART SM00155 240 267 4.4E-5 T 22-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 AMK43_RS07155 ebec6bae03b4d37cd56d9c5cfc6d7f0f 510 Gene3D G3DSA:3.30.870.10 350 485 2.7E-30 T 22-04-2016 AMK43_RS07155 ebec6bae03b4d37cd56d9c5cfc6d7f0f 510 PANTHER PTHR21248 20 510 2.3E-108 T 22-04-2016 AMK43_RS07155 ebec6bae03b4d37cd56d9c5cfc6d7f0f 510 SUPERFAMILY SSF56024 136 319 1.44E-43 T 22-04-2016 AMK43_RS07155 ebec6bae03b4d37cd56d9c5cfc6d7f0f 510 PANTHER PTHR21248:SF10 20 510 2.3E-108 T 22-04-2016 AMK43_RS07155 ebec6bae03b4d37cd56d9c5cfc6d7f0f 510 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 8 510 1.8E-124 T 22-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 AMK43_RS07155 ebec6bae03b4d37cd56d9c5cfc6d7f0f 510 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 62 4.7E-8 T 22-04-2016 IPR027379 Cardiolipin synthase N-terminal AMK43_RS07155 ebec6bae03b4d37cd56d9c5cfc6d7f0f 510 Gene3D G3DSA:3.30.870.10 138 343 8.5E-42 T 22-04-2016 AMK43_RS07155 ebec6bae03b4d37cd56d9c5cfc6d7f0f 510 Hamap MF_01916 Cardiolipin synthase. 16 510 36.729 T 22-04-2016 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 AMK43_RS07155 ebec6bae03b4d37cd56d9c5cfc6d7f0f 510 Pfam PF13091 PLD-like domain 352 476 3.9E-23 T 22-04-2016 IPR025202 Phospholipase D-like domain AMK43_RS07155 ebec6bae03b4d37cd56d9c5cfc6d7f0f 510 Pfam PF13091 PLD-like domain 158 296 7.4E-16 T 22-04-2016 IPR025202 Phospholipase D-like domain AMK43_RS02490 4c0a00055ba2e133b302486f0b99ba91 226 PANTHER PTHR10344 1 223 9.4E-34 T 22-04-2016 AMK43_RS02490 4c0a00055ba2e133b302486f0b99ba91 226 Gene3D G3DSA:3.40.50.300 4 222 2.4E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02490 4c0a00055ba2e133b302486f0b99ba91 226 Pfam PF02223 Thymidylate kinase 7 203 1.4E-19 T 22-04-2016 AMK43_RS02490 4c0a00055ba2e133b302486f0b99ba91 226 Hamap MF_00165 Thymidylate kinase [tmk]. 3 221 13.643 T 22-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 AMK43_RS02490 4c0a00055ba2e133b302486f0b99ba91 226 SUPERFAMILY SSF52540 1 223 4.18E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02920 f62d27580cbb4daf17b18b1a025736ae 568 SUPERFAMILY SSF51445 187 334 8.67E-6 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS02920 f62d27580cbb4daf17b18b1a025736ae 568 Pfam PF13320 Domain of unknown function (DUF4091) 450 515 1.9E-15 T 22-04-2016 IPR025150 Domain of unknown function DUF4091 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 SUPERFAMILY SSF55124 255 275 9.16E-5 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 SUPERFAMILY SSF55124 307 406 9.16E-5 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 SUPERFAMILY SSF56014 122 281 3.14E-16 T 22-04-2016 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 441 457 - T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 PRINTS PR00397 Sirohaem Fe-binding site signature 395 413 3.2E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 PRINTS PR00397 Sirohaem Fe-binding site signature 441 459 3.2E-5 T 22-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 SUPERFAMILY SSF56014 395 475 4.84E-12 T 22-04-2016 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 Gene3D G3DSA:3.30.413.10 395 463 2.9E-9 T 22-04-2016 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 SUPERFAMILY SSF55124 16 117 1.36E-21 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 Gene3D G3DSA:3.30.413.10 125 277 1.3E-12 T 22-04-2016 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 323 384 5.3E-5 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 52 110 4.1E-16 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 PANTHER PTHR11493 320 470 4.4E-35 T 22-04-2016 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 PANTHER PTHR11493 51 291 4.4E-35 T 22-04-2016 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 Gene3D G3DSA:3.90.480.10 52 119 5.6E-22 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 Gene3D G3DSA:3.90.480.10 312 384 5.6E-22 T 22-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 PANTHER PTHR11493:SF47 320 470 4.4E-35 T 22-04-2016 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 PANTHER PTHR11493:SF47 51 291 4.4E-35 T 22-04-2016 AMK43_RS04880 030ebe6cf1be2913ebbfc2640ad7a14b 533 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 125 273 2.6E-11 T 22-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 AMK43_RS02340 fa482bf90a7dff2163d97da16521716f 304 SUPERFAMILY SSF117892 53 186 6.54E-40 T 22-04-2016 IPR001107 Band 7 domain AMK43_RS02340 fa482bf90a7dff2163d97da16521716f 304 ProSitePatterns PS01270 Band 7 protein family signature. 135 163 - T 22-04-2016 IPR018080 Band 7/stomatin-like, conserved site AMK43_RS02340 fa482bf90a7dff2163d97da16521716f 304 Pfam PF01145 SPFH domain / Band 7 family 25 195 2.7E-36 T 22-04-2016 IPR001107 Band 7 domain AMK43_RS02340 fa482bf90a7dff2163d97da16521716f 304 SMART SM00244 21 179 7.5E-54 T 22-04-2016 IPR001107 Band 7 domain AMK43_RS02340 fa482bf90a7dff2163d97da16521716f 304 PRINTS PR00721 Stomatin signature 155 173 1.4E-30 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK43_RS02340 fa482bf90a7dff2163d97da16521716f 304 PRINTS PR00721 Stomatin signature 174 195 1.4E-30 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK43_RS02340 fa482bf90a7dff2163d97da16521716f 304 PRINTS PR00721 Stomatin signature 131 154 1.4E-30 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK43_RS02340 fa482bf90a7dff2163d97da16521716f 304 PRINTS PR00721 Stomatin signature 76 97 1.4E-30 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK43_RS02340 fa482bf90a7dff2163d97da16521716f 304 PRINTS PR00721 Stomatin signature 111 128 1.4E-30 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK43_RS02340 fa482bf90a7dff2163d97da16521716f 304 PANTHER PTHR10264:SF27 1 289 1.7E-106 T 22-04-2016 AMK43_RS02340 fa482bf90a7dff2163d97da16521716f 304 PANTHER PTHR10264 1 289 1.7E-106 T 22-04-2016 IPR001972 Stomatin family GO:0016020 AMK43_RS09665 8dc2285bcd853c7dfae2be9e70f3e278 304 PANTHER PTHR30570:SF1 40 304 6.0E-52 T 22-04-2016 AMK43_RS09665 8dc2285bcd853c7dfae2be9e70f3e278 304 SUPERFAMILY SSF53850 40 303 2.47E-57 T 22-04-2016 AMK43_RS09665 8dc2285bcd853c7dfae2be9e70f3e278 304 PANTHER PTHR30570 40 304 6.0E-52 T 22-04-2016 AMK43_RS09665 8dc2285bcd853c7dfae2be9e70f3e278 304 Gene3D G3DSA:3.40.190.10 264 302 1.1E-5 T 22-04-2016 AMK43_RS09665 8dc2285bcd853c7dfae2be9e70f3e278 304 Gene3D G3DSA:3.40.190.10 1 114 1.1E-5 T 22-04-2016 AMK43_RS09665 8dc2285bcd853c7dfae2be9e70f3e278 304 Pfam PF12849 PBP superfamily domain 37 269 1.2E-25 T 22-04-2016 IPR024370 PBP domain AMK43_RS09665 8dc2285bcd853c7dfae2be9e70f3e278 304 Gene3D G3DSA:3.40.190.10 128 263 1.7E-30 T 22-04-2016 AMK43_RS02830 e259a0d4dc24f490142d9be7aa767d58 371 Gene3D G3DSA:3.40.640.10 52 241 2.4E-20 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS02830 e259a0d4dc24f490142d9be7aa767d58 371 SUPERFAMILY SSF53383 50 363 1.19E-29 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS02830 e259a0d4dc24f490142d9be7aa767d58 371 Pfam PF00266 Aminotransferase class-V 52 226 4.2E-11 T 22-04-2016 IPR000192 Aminotransferase class V domain AMK43_RS07870 677de631073edba7302196c5cd8cefc8 341 Gene3D G3DSA:1.10.10.60 12 44 0.001 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS07870 677de631073edba7302196c5cd8cefc8 341 Gene3D G3DSA:3.30.420.10 191 331 1.1E-4 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS07870 677de631073edba7302196c5cd8cefc8 341 Pfam PF13936 Helix-turn-helix domain 12 55 2.2E-9 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain AMK43_RS07870 677de631073edba7302196c5cd8cefc8 341 SUPERFAMILY SSF53098 189 331 2.66E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS07870 677de631073edba7302196c5cd8cefc8 341 PANTHER PTHR10948 8 341 5.1E-52 T 22-04-2016 AMK43_RS06500 677de631073edba7302196c5cd8cefc8 341 Gene3D G3DSA:1.10.10.60 12 44 0.001 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS06500 677de631073edba7302196c5cd8cefc8 341 Gene3D G3DSA:3.30.420.10 191 331 1.1E-4 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS06500 677de631073edba7302196c5cd8cefc8 341 Pfam PF13936 Helix-turn-helix domain 12 55 2.2E-9 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain AMK43_RS06500 677de631073edba7302196c5cd8cefc8 341 SUPERFAMILY SSF53098 189 331 2.66E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS06500 677de631073edba7302196c5cd8cefc8 341 PANTHER PTHR10948 8 341 5.1E-52 T 22-04-2016 AMK43_RS00680 f947f53d90bcb008a9641f59baac4bfb 330 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 66 274 3.3E-8 T 22-04-2016 AMK43_RS00680 f947f53d90bcb008a9641f59baac4bfb 330 PIRSF PIRSF027386 1 329 1.8E-102 T 22-04-2016 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type AMK43_RS00680 f947f53d90bcb008a9641f59baac4bfb 330 SUPERFAMILY SSF53850 33 326 1.56E-32 T 22-04-2016 AMK43_RS00680 f947f53d90bcb008a9641f59baac4bfb 330 Gene3D G3DSA:3.40.190.10 238 269 2.3E-5 T 22-04-2016 AMK43_RS00680 f947f53d90bcb008a9641f59baac4bfb 330 Gene3D G3DSA:3.40.190.10 67 112 2.3E-5 T 22-04-2016 AMK43_RS00680 f947f53d90bcb008a9641f59baac4bfb 330 PANTHER PTHR30024 62 308 2.6E-25 T 22-04-2016 AMK43_RS00680 f947f53d90bcb008a9641f59baac4bfb 330 PANTHER PTHR30024:SF1 62 308 2.6E-25 T 22-04-2016 AMK43_RS00680 f947f53d90bcb008a9641f59baac4bfb 330 Gene3D G3DSA:3.40.190.10 122 237 4.5E-13 T 22-04-2016 AMK43_RS08085 e5ab0a196493a3444fe66dee990ef32a 503 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 503 41.532 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK43_RS08085 e5ab0a196493a3444fe66dee990ef32a 503 PANTHER PTHR10277:SF9 1 501 2.1E-249 T 22-04-2016 AMK43_RS08085 e5ab0a196493a3444fe66dee990ef32a 503 Pfam PF08502 LeuA allosteric (dimerisation) domain 372 500 4.8E-35 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK43_RS08085 e5ab0a196493a3444fe66dee990ef32a 503 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 498 4.0E-212 T 22-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK43_RS08085 e5ab0a196493a3444fe66dee990ef32a 503 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK43_RS08085 e5ab0a196493a3444fe66dee990ef32a 503 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 22-04-2016 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK43_RS08085 e5ab0a196493a3444fe66dee990ef32a 503 PANTHER PTHR10277 1 501 2.1E-249 T 22-04-2016 AMK43_RS08085 e5ab0a196493a3444fe66dee990ef32a 503 SMART SM00917 371 501 1.8E-30 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK43_RS08085 e5ab0a196493a3444fe66dee990ef32a 503 SUPERFAMILY SSF51569 1 292 4.03E-98 T 22-04-2016 AMK43_RS08085 e5ab0a196493a3444fe66dee990ef32a 503 Pfam PF00682 HMGL-like 5 274 5.1E-101 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMK43_RS08085 e5ab0a196493a3444fe66dee990ef32a 503 Gene3D G3DSA:3.20.20.70 1 347 1.2E-148 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS08085 e5ab0a196493a3444fe66dee990ef32a 503 SUPERFAMILY SSF110921 393 500 2.09E-25 T 22-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 AMK43_RS00520 840b035b071179a1fa10d9dc20d7db0d 221 PANTHER PTHR30363 1 111 5.8E-40 T 22-04-2016 AMK43_RS00520 840b035b071179a1fa10d9dc20d7db0d 221 Pfam PF08279 HTH domain 6 58 1.1E-10 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 AMK43_RS00520 840b035b071179a1fa10d9dc20d7db0d 221 Gene3D G3DSA:1.10.10.10 1 58 1.4E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS00520 840b035b071179a1fa10d9dc20d7db0d 221 PANTHER PTHR30363:SF23 1 111 5.8E-40 T 22-04-2016 AMK43_RS00520 840b035b071179a1fa10d9dc20d7db0d 221 SUPERFAMILY SSF46785 1 58 4.8E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS08720 66bf3ceec6228bebde36cc4850b157ef 252 Gene3D G3DSA:3.50.30.50 15 250 8.3E-50 T 22-04-2016 AMK43_RS08720 66bf3ceec6228bebde36cc4850b157ef 252 PANTHER PTHR31118 10 249 5.5E-48 T 22-04-2016 AMK43_RS08720 66bf3ceec6228bebde36cc4850b157ef 252 PANTHER PTHR31118:SF9 10 249 5.5E-48 T 22-04-2016 AMK43_RS08720 66bf3ceec6228bebde36cc4850b157ef 252 SUPERFAMILY SSF102198 15 248 9.29E-46 T 22-04-2016 AMK43_RS08720 66bf3ceec6228bebde36cc4850b157ef 252 Pfam PF04199 Putative cyclase 18 187 1.8E-27 T 22-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 AMK43_RS03025 2ba56302a52db685c0f67f7d8dd12582 511 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 12 503 2.4E-122 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK43_RS03025 2ba56302a52db685c0f67f7d8dd12582 511 SUPERFAMILY SSF55486 9 503 3.42E-88 T 22-04-2016 AMK43_RS03025 2ba56302a52db685c0f67f7d8dd12582 511 PANTHER PTHR34217:SF1 2 509 1.3E-196 T 22-04-2016 AMK43_RS03025 2ba56302a52db685c0f67f7d8dd12582 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 271 290 1.9E-50 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK43_RS03025 2ba56302a52db685c0f67f7d8dd12582 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 388 405 1.9E-50 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK43_RS03025 2ba56302a52db685c0f67f7d8dd12582 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 298 314 1.9E-50 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK43_RS03025 2ba56302a52db685c0f67f7d8dd12582 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 251 270 1.9E-50 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK43_RS03025 2ba56302a52db685c0f67f7d8dd12582 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 411 432 1.9E-50 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK43_RS03025 2ba56302a52db685c0f67f7d8dd12582 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 149 169 1.9E-50 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK43_RS03025 2ba56302a52db685c0f67f7d8dd12582 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 234 250 1.9E-50 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK43_RS03025 2ba56302a52db685c0f67f7d8dd12582 511 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 455 473 1.9E-50 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK43_RS03025 2ba56302a52db685c0f67f7d8dd12582 511 PIRSF PIRSF006615 4 509 1.1E-165 T 22-04-2016 IPR001333 Peptidase M32, carboxypeptidase Taq metallopeptidase GO:0004181|GO:0006508 AMK43_RS03025 2ba56302a52db685c0f67f7d8dd12582 511 PANTHER PTHR34217 2 509 1.3E-196 T 22-04-2016 AMK43_RS06720 bdfed4383b56bbf832489b473a15eb2b 113 PANTHER PTHR23089 3 108 1.3E-46 T 22-04-2016 IPR001310 Histidine triad (HIT) protein AMK43_RS06720 bdfed4383b56bbf832489b473a15eb2b 113 Pfam PF01230 HIT domain 11 107 5.0E-28 T 22-04-2016 IPR001310 Histidine triad (HIT) protein AMK43_RS06720 bdfed4383b56bbf832489b473a15eb2b 113 SUPERFAMILY SSF54197 1 109 4.02E-35 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 AMK43_RS06720 bdfed4383b56bbf832489b473a15eb2b 113 PRINTS PR00332 Histidine triad family signature 25 43 4.3E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein AMK43_RS06720 bdfed4383b56bbf832489b473a15eb2b 113 PRINTS PR00332 Histidine triad family signature 4 20 4.3E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein AMK43_RS06720 bdfed4383b56bbf832489b473a15eb2b 113 PRINTS PR00332 Histidine triad family signature 93 103 4.3E-20 T 22-04-2016 IPR001310 Histidine triad (HIT) protein AMK43_RS06720 bdfed4383b56bbf832489b473a15eb2b 113 PANTHER PTHR23089:SF3 3 108 1.3E-46 T 22-04-2016 AMK43_RS06720 bdfed4383b56bbf832489b473a15eb2b 113 Gene3D G3DSA:3.30.428.10 2 107 1.9E-36 T 22-04-2016 IPR011146 HIT-like domain GO:0003824 AMK43_RS06780 9cd8a5a7d2ff0dba7e5e5859723fa469 86 PANTHER PTHR33705:SF1 1 86 1.2E-29 T 22-04-2016 AMK43_RS06780 9cd8a5a7d2ff0dba7e5e5859723fa469 86 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 22-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site AMK43_RS06780 9cd8a5a7d2ff0dba7e5e5859723fa469 86 PANTHER PTHR33705 1 86 1.2E-29 T 22-04-2016 AMK43_RS06780 9cd8a5a7d2ff0dba7e5e5859723fa469 86 SUPERFAMILY SSF55594 1 82 4.32E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS06780 9cd8a5a7d2ff0dba7e5e5859723fa469 86 Gene3D G3DSA:3.30.1340.10 1 82 2.9E-30 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS06780 9cd8a5a7d2ff0dba7e5e5859723fa469 86 Pfam PF00381 PTS HPr component phosphorylation site 3 82 3.7E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS06780 9cd8a5a7d2ff0dba7e5e5859723fa469 86 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.6E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS06780 9cd8a5a7d2ff0dba7e5e5859723fa469 86 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.6E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS06780 9cd8a5a7d2ff0dba7e5e5859723fa469 86 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.6E-18 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS06780 9cd8a5a7d2ff0dba7e5e5859723fa469 86 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 3.1E-27 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS02320 d234c5bce38f3f46a6803d9c810e236d 504 Pfam PF00717 Peptidase S24-like 224 284 3.5E-9 T 22-04-2016 IPR019759 Peptidase S24/S26A/S26B AMK43_RS02320 d234c5bce38f3f46a6803d9c810e236d 504 PANTHER PTHR12383:SF14 442 504 1.6E-42 T 22-04-2016 AMK43_RS02320 d234c5bce38f3f46a6803d9c810e236d 504 PANTHER PTHR12383:SF14 159 284 1.6E-42 T 22-04-2016 AMK43_RS02320 d234c5bce38f3f46a6803d9c810e236d 504 SUPERFAMILY SSF51306 216 289 6.8E-36 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMK43_RS02320 d234c5bce38f3f46a6803d9c810e236d 504 SUPERFAMILY SSF51306 448 504 6.8E-36 T 22-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C AMK43_RS02320 d234c5bce38f3f46a6803d9c810e236d 504 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 204 300 7.0E-19 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMK43_RS02320 d234c5bce38f3f46a6803d9c810e236d 504 PANTHER PTHR12383 442 504 1.6E-42 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMK43_RS02320 d234c5bce38f3f46a6803d9c810e236d 504 PANTHER PTHR12383 159 284 1.6E-42 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMK43_RS02320 d234c5bce38f3f46a6803d9c810e236d 504 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 269 281 1.5E-11 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMK43_RS02320 d234c5bce38f3f46a6803d9c810e236d 504 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 217 233 1.5E-11 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMK43_RS02320 d234c5bce38f3f46a6803d9c810e236d 504 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 458 477 1.5E-11 T 22-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 AMK43_RS02320 d234c5bce38f3f46a6803d9c810e236d 504 Gene3D G3DSA:2.10.109.10 458 502 1.3E-36 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMK43_RS02320 d234c5bce38f3f46a6803d9c810e236d 504 Gene3D G3DSA:2.10.109.10 213 279 1.3E-36 T 22-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain AMK43_RS06370 ff0b4d1f29a5da2271d7cc13ae02a766 381 PANTHER PTHR11751 10 379 1.2E-114 T 22-04-2016 AMK43_RS06370 ff0b4d1f29a5da2271d7cc13ae02a766 381 PANTHER PTHR11751:SF417 10 379 1.2E-114 T 22-04-2016 AMK43_RS06370 ff0b4d1f29a5da2271d7cc13ae02a766 381 Gene3D G3DSA:3.90.1150.10 268 380 2.7E-27 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS06370 ff0b4d1f29a5da2271d7cc13ae02a766 381 Gene3D G3DSA:3.40.640.10 40 267 1.6E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS06370 ff0b4d1f29a5da2271d7cc13ae02a766 381 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 252 275 1.1E-13 T 22-04-2016 AMK43_RS06370 ff0b4d1f29a5da2271d7cc13ae02a766 381 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 110 131 1.1E-13 T 22-04-2016 AMK43_RS06370 ff0b4d1f29a5da2271d7cc13ae02a766 381 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 156 180 1.1E-13 T 22-04-2016 AMK43_RS06370 ff0b4d1f29a5da2271d7cc13ae02a766 381 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 221 245 1.1E-13 T 22-04-2016 AMK43_RS06370 ff0b4d1f29a5da2271d7cc13ae02a766 381 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 227 240 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AMK43_RS06370 ff0b4d1f29a5da2271d7cc13ae02a766 381 SUPERFAMILY SSF53383 1 379 1.61E-102 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS06370 ff0b4d1f29a5da2271d7cc13ae02a766 381 Pfam PF00155 Aminotransferase class I and II 27 375 3.7E-65 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK43_RS10500 0c2110d34b65042ab2778e7834429114 253 PIRSF PIRSF005902 1 253 8.7E-83 T 22-04-2016 IPR001130 TatD family GO:0016788 AMK43_RS10500 0c2110d34b65042ab2778e7834429114 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 4 252 5.5E-87 T 22-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 AMK43_RS10500 0c2110d34b65042ab2778e7834429114 253 SUPERFAMILY SSF51556 3 253 3.81E-83 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK43_RS10500 0c2110d34b65042ab2778e7834429114 253 PANTHER PTHR10060 1 253 1.2E-108 T 22-04-2016 IPR001130 TatD family GO:0016788 AMK43_RS10500 0c2110d34b65042ab2778e7834429114 253 PANTHER PTHR10060:SF20 1 253 1.2E-108 T 22-04-2016 AMK43_RS10500 0c2110d34b65042ab2778e7834429114 253 Gene3D G3DSA:3.20.20.140 2 253 3.0E-89 T 22-04-2016 AMK43_RS10500 0c2110d34b65042ab2778e7834429114 253 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 188 204 - T 22-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 AMK43_RS10500 0c2110d34b65042ab2778e7834429114 253 Pfam PF01026 TatD related DNase 5 252 6.5E-76 T 22-04-2016 IPR001130 TatD family GO:0016788 AMK43_RS04760 28f27c27166e8bfb54813b77aae475f7 491 Gene3D G3DSA:3.90.550.10 283 479 5.8E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS04760 28f27c27166e8bfb54813b77aae475f7 491 PANTHER PTHR19136:SF78 283 479 5.3E-39 T 22-04-2016 AMK43_RS04760 28f27c27166e8bfb54813b77aae475f7 491 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 20 246 6.6E-41 T 22-04-2016 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC AMK43_RS04760 28f27c27166e8bfb54813b77aae475f7 491 Pfam PF12804 MobA-like NTP transferase domain 287 450 5.9E-31 T 22-04-2016 IPR025877 MobA-like NTP transferase AMK43_RS04760 28f27c27166e8bfb54813b77aae475f7 491 SUPERFAMILY SSF53448 283 475 5.42E-26 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS04760 28f27c27166e8bfb54813b77aae475f7 491 PANTHER PTHR19136 283 479 5.3E-39 T 22-04-2016 AMK43_RS01355 9434d77477421b8a7152c63dcb5a40a1 449 PANTHER PTHR11918:SF45 13 445 1.9E-113 T 22-04-2016 AMK43_RS01355 9434d77477421b8a7152c63dcb5a40a1 449 SUPERFAMILY SSF102114 127 371 7.46E-48 T 22-04-2016 AMK43_RS01355 9434d77477421b8a7152c63dcb5a40a1 449 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 154 174 - T 22-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 AMK43_RS01355 9434d77477421b8a7152c63dcb5a40a1 449 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 17 418 2.1E-141 T 22-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 AMK43_RS01355 9434d77477421b8a7152c63dcb5a40a1 449 SMART SM00729 150 368 6.8E-42 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK43_RS01355 9434d77477421b8a7152c63dcb5a40a1 449 Pfam PF00919 Uncharacterized protein family UPF0004 15 109 7.8E-25 T 22-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 AMK43_RS01355 9434d77477421b8a7152c63dcb5a40a1 449 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 14 429 1.5E-119 T 22-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 AMK43_RS01355 9434d77477421b8a7152c63dcb5a40a1 449 Gene3D G3DSA:3.80.30.20 149 379 1.3E-64 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMK43_RS01355 9434d77477421b8a7152c63dcb5a40a1 449 Pfam PF04055 Radical SAM superfamily 155 324 4.7E-21 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS01355 9434d77477421b8a7152c63dcb5a40a1 449 PANTHER PTHR11918 13 445 1.9E-113 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein AMK43_RS08225 1fac1be337cabc20fb5640bbc3c700a0 426 PANTHER PTHR22777:SF8 1 424 7.5E-156 T 22-04-2016 AMK43_RS08225 1fac1be337cabc20fb5640bbc3c700a0 426 Pfam PF00571 CBS domain 274 325 8.6E-5 T 22-04-2016 IPR000644 CBS domain AMK43_RS08225 1fac1be337cabc20fb5640bbc3c700a0 426 Pfam PF00571 CBS domain 206 258 4.7E-4 T 22-04-2016 IPR000644 CBS domain AMK43_RS08225 1fac1be337cabc20fb5640bbc3c700a0 426 PANTHER PTHR22777 1 424 7.5E-156 T 22-04-2016 AMK43_RS08225 1fac1be337cabc20fb5640bbc3c700a0 426 SUPERFAMILY SSF54631 199 340 1.21E-29 T 22-04-2016 AMK43_RS08225 1fac1be337cabc20fb5640bbc3c700a0 426 Pfam PF01595 Domain of unknown function DUF21 2 188 4.3E-46 T 22-04-2016 IPR002550 Domain of unknown function DUF21 AMK43_RS08225 1fac1be337cabc20fb5640bbc3c700a0 426 Pfam PF03471 Transporter associated domain 341 418 6.2E-17 T 22-04-2016 IPR005170 Transporter-associated domain AMK43_RS08225 1fac1be337cabc20fb5640bbc3c700a0 426 SUPERFAMILY SSF56176 339 421 7.63E-16 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK43_RS08225 1fac1be337cabc20fb5640bbc3c700a0 426 Gene3D G3DSA:3.10.580.10 189 332 4.0E-22 T 22-04-2016 AMK43_RS08225 1fac1be337cabc20fb5640bbc3c700a0 426 Gene3D G3DSA:3.30.465.10 333 421 3.3E-22 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK43_RS08225 1fac1be337cabc20fb5640bbc3c700a0 426 SMART SM01091 340 421 3.1E-15 T 22-04-2016 IPR005170 Transporter-associated domain AMK43_RS05680 1c84492a02265e715d19f459d0fbad9c 310 Gene3D G3DSA:2.20.110.10 135 249 2.1E-6 T 22-04-2016 AMK43_RS05680 1c84492a02265e715d19f459d0fbad9c 310 SUPERFAMILY SSF82185 126 221 6.41E-17 T 22-04-2016 AMK43_RS05680 1c84492a02265e715d19f459d0fbad9c 310 PANTHER PTHR33706 67 310 4.8E-14 T 22-04-2016 AMK43_RS05680 1c84492a02265e715d19f459d0fbad9c 310 PANTHER PTHR33706:SF1 67 310 4.8E-14 T 22-04-2016 AMK43_RS01385 c4f754565600fc5296d85c7d1bf88f44 249 PIRSF PIRSF005578 1 249 8.9E-99 T 22-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 AMK43_RS01385 c4f754565600fc5296d85c7d1bf88f44 249 Gene3D G3DSA:3.40.50.150 88 235 2.1E-8 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS01385 c4f754565600fc5296d85c7d1bf88f44 249 PANTHER PTHR32319:SF0 1 248 1.5E-115 T 22-04-2016 AMK43_RS01385 c4f754565600fc5296d85c7d1bf88f44 249 SMART SM00363 3 69 3.9E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS01385 c4f754565600fc5296d85c7d1bf88f44 249 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 4 237 1.3E-78 T 22-04-2016 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 AMK43_RS01385 c4f754565600fc5296d85c7d1bf88f44 249 SUPERFAMILY SSF53335 54 239 3.16E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS01385 c4f754565600fc5296d85c7d1bf88f44 249 Pfam PF01728 FtsJ-like methyltransferase 60 244 2.7E-25 T 22-04-2016 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 AMK43_RS01385 c4f754565600fc5296d85c7d1bf88f44 249 Gene3D G3DSA:3.10.290.10 3 87 5.1E-22 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS01385 c4f754565600fc5296d85c7d1bf88f44 249 SUPERFAMILY SSF55174 3 68 2.36E-11 T 22-04-2016 AMK43_RS01385 c4f754565600fc5296d85c7d1bf88f44 249 PANTHER PTHR32319 1 248 1.5E-115 T 22-04-2016 AMK43_RS01385 c4f754565600fc5296d85c7d1bf88f44 249 Pfam PF01479 S4 domain 4 49 4.7E-8 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS09330 bc81ebce63d2e582ab9e670448a3cab9 344 PANTHER PTHR11019 87 342 3.4E-28 T 22-04-2016 AMK43_RS09330 bc81ebce63d2e582ab9e670448a3cab9 344 Pfam PF12833 Helix-turn-helix domain 257 335 2.2E-20 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS09330 bc81ebce63d2e582ab9e670448a3cab9 344 Gene3D G3DSA:1.10.10.60 288 338 3.6E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS09330 bc81ebce63d2e582ab9e670448a3cab9 344 Gene3D G3DSA:1.10.10.60 250 287 1.6E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS09330 bc81ebce63d2e582ab9e670448a3cab9 344 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 288 330 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK43_RS09330 bc81ebce63d2e582ab9e670448a3cab9 344 SUPERFAMILY SSF46689 288 336 3.9E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS09330 bc81ebce63d2e582ab9e670448a3cab9 344 SMART SM00342 251 334 5.6E-23 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS09330 bc81ebce63d2e582ab9e670448a3cab9 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 303 318 9.8E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK43_RS09330 bc81ebce63d2e582ab9e670448a3cab9 344 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 318 334 9.8E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK43_RS06985 853f9d022afa254d34e14b3c9aaa7e3f 315 Pfam PF00005 ABC transporter 31 180 1.8E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS06985 853f9d022afa254d34e14b3c9aaa7e3f 315 PANTHER PTHR24220:SF336 5 265 9.6E-124 T 22-04-2016 AMK43_RS06985 853f9d022afa254d34e14b3c9aaa7e3f 315 SMART SM00382 39 230 1.6E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS06985 853f9d022afa254d34e14b3c9aaa7e3f 315 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS06985 853f9d022afa254d34e14b3c9aaa7e3f 315 Gene3D G3DSA:3.40.50.300 3 254 4.4E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06985 853f9d022afa254d34e14b3c9aaa7e3f 315 SUPERFAMILY SSF52540 4 252 4.94E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06985 853f9d022afa254d34e14b3c9aaa7e3f 315 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 269 9.0E-8 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK43_RS06985 853f9d022afa254d34e14b3c9aaa7e3f 315 PANTHER PTHR24220 5 265 9.6E-124 T 22-04-2016 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 PIRSF PIRSF000497 1 382 2.2E-166 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 SUPERFAMILY SSF55973 106 229 1.57E-39 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 5 100 3.2E-38 T 22-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 230 371 1.2E-64 T 22-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 SUPERFAMILY SSF55973 4 109 5.49E-41 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 Gene3D G3DSA:3.30.300.10 12 129 5.2E-42 T 22-04-2016 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 256 264 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 Gene3D G3DSA:3.30.300.10 241 381 1.1E-64 T 22-04-2016 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 Gene3D G3DSA:3.30.300.10 130 230 4.2E-36 T 22-04-2016 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 SUPERFAMILY SSF55973 230 380 8.05E-64 T 22-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 PANTHER PTHR11964 1 380 1.6E-227 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 110 120 - T 22-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 380 1.2E-157 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 382 51.016 T 22-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK43_RS06670 5907574ea35ff875ed5560a8a0fbdff4 382 Pfam PF02772 S-adenosylmethionine synthetase, central domain 110 228 3.6E-38 T 22-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 AMK43_RS02475 aea60717f1390a4598f572b6ab3b345d 582 Gene3D G3DSA:3.10.20.310 63 148 2.9E-16 T 22-04-2016 AMK43_RS02475 aea60717f1390a4598f572b6ab3b345d 582 PIRSF PIRSF029745 20 582 3.3E-113 T 22-04-2016 IPR027282 Two partner secretion pathway transporter GO:0015031 AMK43_RS02475 aea60717f1390a4598f572b6ab3b345d 582 PANTHER PTHR34597:SF2 1 582 1.3E-97 T 22-04-2016 AMK43_RS02475 aea60717f1390a4598f572b6ab3b345d 582 PANTHER PTHR34597 1 582 1.3E-97 T 22-04-2016 AMK43_RS02475 aea60717f1390a4598f572b6ab3b345d 582 Pfam PF08479 POTRA domain, ShlB-type 67 148 1.7E-17 T 22-04-2016 IPR013686 Polypeptide-transport-associated, ShlB-type AMK43_RS02475 aea60717f1390a4598f572b6ab3b345d 582 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 169 560 6.0E-26 T 22-04-2016 IPR005565 Haemolysin activator HlyB AMK43_RS02475 aea60717f1390a4598f572b6ab3b345d 582 Gene3D G3DSA:2.40.160.50 181 582 3.5E-84 T 22-04-2016 AMK43_RS04160 c30456fb2e48cd1d68eeb13aef65e4a8 389 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 2 164 4.1E-14 T 22-04-2016 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: REACT_22258 AMK43_RS04160 c30456fb2e48cd1d68eeb13aef65e4a8 389 PANTHER PTHR11877 2 385 1.2E-92 T 22-04-2016 AMK43_RS04160 c30456fb2e48cd1d68eeb13aef65e4a8 389 TIGRFAM TIGR01835 HMG-CoA-S_prok: hydroxymethylglutaryl-CoA synthase 3 384 3.3E-151 T 22-04-2016 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|UniPathway: UPA00058 AMK43_RS04160 c30456fb2e48cd1d68eeb13aef65e4a8 389 SUPERFAMILY SSF53901 2 166 9.87E-38 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS04160 c30456fb2e48cd1d68eeb13aef65e4a8 389 Gene3D G3DSA:3.40.47.10 1 249 4.9E-82 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS04160 c30456fb2e48cd1d68eeb13aef65e4a8 389 SUPERFAMILY SSF53901 168 385 6.24E-62 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS04160 c30456fb2e48cd1d68eeb13aef65e4a8 389 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 249 349 2.1E-11 T 22-04-2016 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: REACT_22258|UniPathway: UPA00058 AMK43_RS04160 c30456fb2e48cd1d68eeb13aef65e4a8 389 PANTHER PTHR11877:SF26 2 385 1.2E-92 T 22-04-2016 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 SUPERFAMILY SSF53223 3 259 8.63E-98 T 22-04-2016 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 SMART SM01274 68 250 4.5E-87 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 SMART SM00919 260 516 3.2E-117 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 PANTHER PTHR23406:SF2 2 544 1.4E-237 T 22-04-2016 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 PIRSF PIRSF000106 1 546 1.9E-214 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 PANTHER PTHR23406 2 544 1.4E-237 T 22-04-2016 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 Pfam PF03949 Malic enzyme, NAD binding domain 260 515 1.5E-99 T 22-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 PRINTS PR00072 Malic enzyme signature 256 272 3.9E-65 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 PRINTS PR00072 Malic enzyme signature 74 98 3.9E-65 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 PRINTS PR00072 Malic enzyme signature 136 165 3.9E-65 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 PRINTS PR00072 Malic enzyme signature 287 303 3.9E-65 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 PRINTS PR00072 Malic enzyme signature 231 249 3.9E-65 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 PRINTS PR00072 Malic enzyme signature 172 194 3.9E-65 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 PRINTS PR00072 Malic enzyme signature 394 410 3.9E-65 T 22-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 Pfam PF00390 Malic enzyme, N-terminal domain 69 250 1.3E-68 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 SUPERFAMILY SSF51735 260 544 6.89E-89 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 Gene3D G3DSA:3.40.50.720 258 545 4.7E-103 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 ProSitePatterns PS00331 Malic enzymes signature. 256 272 - T 22-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 AMK43_RS05105 2c2206e7f95e9b56a8c315357434b072 546 Gene3D G3DSA:3.40.50.10380 3 257 2.6E-101 T 22-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 AMK43_RS02400 f682d69ad02ab5160c6453b4ff5b5d1b 297 Pfam PF01497 Periplasmic binding protein 53 273 7.2E-36 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AMK43_RS02400 f682d69ad02ab5160c6453b4ff5b5d1b 297 Gene3D G3DSA:3.40.50.1980 51 169 2.4E-26 T 22-04-2016 AMK43_RS02400 f682d69ad02ab5160c6453b4ff5b5d1b 297 PANTHER PTHR30535 48 294 6.8E-39 T 22-04-2016 AMK43_RS02400 f682d69ad02ab5160c6453b4ff5b5d1b 297 SUPERFAMILY SSF53807 49 294 2.51E-54 T 22-04-2016 AMK43_RS02400 f682d69ad02ab5160c6453b4ff5b5d1b 297 Gene3D G3DSA:3.40.50.1980 170 293 4.8E-22 T 22-04-2016 AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 455 1.5E-125 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 Gene3D G3DSA:3.30.1360.120 3 123 6.7E-43 T 22-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 218 365 2.1E-30 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 Gene3D G3DSA:3.40.50.300 215 244 4.9E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 PRINTS PR00449 Transforming protein P21 ras signature 352 374 4.6E-6 T 22-04-2016 AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 PRINTS PR00449 Transforming protein P21 ras signature 259 281 4.6E-6 T 22-04-2016 AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 PRINTS PR00449 Transforming protein P21 ras signature 219 240 4.6E-6 T 22-04-2016 AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 SUPERFAMILY SSF52540 76 154 3.66E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 SUPERFAMILY SSF52540 190 370 3.66E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 PANTHER PTHR11649:SF56 7 455 1.5E-147 T 22-04-2016 AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 PANTHER PTHR11649 7 455 1.5E-147 T 22-04-2016 AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 455 33.961 T 22-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 Pfam PF12631 MnmE helical domain 125 452 5.0E-54 T 22-04-2016 IPR025867 MnmE, helical domain AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 Gene3D G3DSA:3.40.50.300 288 385 4.7E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 Pfam PF01926 50S ribosome-binding GTPase 221 335 5.5E-27 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 122 7.5E-38 T 22-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 Gene3D G3DSA:1.20.120.430 245 273 1.1E-51 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 Gene3D G3DSA:1.20.120.430 124 184 1.1E-51 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AMK43_RS00030 d40db122ae07877c263b43f72b77b26d 455 Gene3D G3DSA:1.20.120.430 386 455 1.1E-51 T 22-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 AMK43_RS09890 857b2b98dbbc9b29619142b06feb7d82 219 Pfam PF02629 CoA binding domain 85 181 3.5E-12 T 22-04-2016 IPR003781 CoA-binding GO:0048037 AMK43_RS09890 857b2b98dbbc9b29619142b06feb7d82 219 PANTHER PTHR35786 1 219 1.8E-57 T 22-04-2016 AMK43_RS09890 857b2b98dbbc9b29619142b06feb7d82 219 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 3 213 28.29 T 22-04-2016 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 AMK43_RS09890 857b2b98dbbc9b29619142b06feb7d82 219 Pfam PF06971 Putative DNA-binding protein N-terminus 7 54 5.6E-12 T 22-04-2016 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 AMK43_RS09890 857b2b98dbbc9b29619142b06feb7d82 219 Gene3D G3DSA:1.10.10.10 7 76 1.1E-21 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09890 857b2b98dbbc9b29619142b06feb7d82 219 SUPERFAMILY SSF51735 85 206 1.17E-15 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS09890 857b2b98dbbc9b29619142b06feb7d82 219 Gene3D G3DSA:3.40.50.720 78 215 1.9E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS09890 857b2b98dbbc9b29619142b06feb7d82 219 SUPERFAMILY SSF46785 12 80 8.16E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09890 857b2b98dbbc9b29619142b06feb7d82 219 SMART SM00881 80 184 0.0026 T 22-04-2016 IPR003781 CoA-binding GO:0048037 AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 Gene3D G3DSA:2.160.20.10 46 333 1.3E-72 T 22-04-2016 IPR012334 Pectin lyase fold AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 SUPERFAMILY SSF51126 47 336 5.02E-36 T 22-04-2016 IPR011050 Pectin lyase fold/virulence factor AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 PANTHER PTHR32093 10 183 7.4E-32 T 22-04-2016 AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 SMART SM00912 54 176 1.3E-23 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 Pfam PF13332 Haemagluttinin repeat 1630 1737 4.8E-4 T 22-04-2016 IPR025157 Haemagluttinin repeat AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 Pfam PF13332 Haemagluttinin repeat 1378 1445 0.0086 T 22-04-2016 IPR025157 Haemagluttinin repeat AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 Pfam PF13332 Haemagluttinin repeat 1768 1932 4.5E-8 T 22-04-2016 IPR025157 Haemagluttinin repeat AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 Pfam PF05860 haemagglutination activity domain 40 175 1.7E-23 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 Pfam PF05594 Haemagluttinin repeat 226 297 0.36 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 Pfam PF05594 Haemagluttinin repeat 639 700 0.29 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 Pfam PF05594 Haemagluttinin repeat 949 994 1.7 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 Pfam PF05594 Haemagluttinin repeat 562 593 180.0 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 Pfam PF05594 Haemagluttinin repeat 869 945 1.8 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 Pfam PF05594 Haemagluttinin repeat 398 432 3.1 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 Pfam PF05594 Haemagluttinin repeat 469 534 0.088 T 22-04-2016 IPR008619 Filamentous haemagglutinin repeat AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 967 1000 1.0 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 926 965 0.66 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 386 424 0.017 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 798 826 0.26 T 22-04-2016 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat AMK43_RS02430 59c7290b99100683021f34ce4f094079 2648 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 77 170 5.1E-12 T 22-04-2016 IPR008638 Filamentous haemagglutinin, N-terminal AMK43_RS08390 a4ea7d5ac780d52de84002d1de2343b1 431 SUPERFAMILY SSF55205 3 426 3.27E-107 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMK43_RS08390 a4ea7d5ac780d52de84002d1de2343b1 431 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 418 5.7E-94 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK43_RS08390 a4ea7d5ac780d52de84002d1de2343b1 431 PANTHER PTHR21090:SF5 5 431 4.4E-136 T 22-04-2016 AMK43_RS08390 a4ea7d5ac780d52de84002d1de2343b1 431 Gene3D G3DSA:3.65.10.10 20 232 1.6E-40 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK43_RS08390 a4ea7d5ac780d52de84002d1de2343b1 431 ProSitePatterns PS00885 EPSP synthase signature 2. 335 353 - T 22-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS08390 a4ea7d5ac780d52de84002d1de2343b1 431 PANTHER PTHR21090 5 431 4.4E-136 T 22-04-2016 AMK43_RS08390 a4ea7d5ac780d52de84002d1de2343b1 431 PIRSF PIRSF000505 1 428 3.3E-125 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS08390 a4ea7d5ac780d52de84002d1de2343b1 431 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 8 425 31.236 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS08390 a4ea7d5ac780d52de84002d1de2343b1 431 Gene3D G3DSA:3.65.10.10 233 423 2.1E-56 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK43_RS08390 a4ea7d5ac780d52de84002d1de2343b1 431 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 12 423 5.3E-108 T 22-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 75 146 2.1E-14 T 22-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 PANTHER PTHR11573 15 674 2.9E-227 T 22-04-2016 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 Gene3D G3DSA:3.20.70.20 552 667 1.8E-55 T 22-04-2016 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 Gene3D G3DSA:3.20.70.20 59 272 1.8E-55 T 22-04-2016 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 Gene3D G3DSA:3.20.70.20 325 490 1.8E-55 T 22-04-2016 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 78 671 2.3E-161 T 22-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 PRINTS PR01183 Ribonucleotide reductase large chain signature 442 464 1.3E-29 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 PRINTS PR01183 Ribonucleotide reductase large chain signature 470 493 1.3E-29 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 PRINTS PR01183 Ribonucleotide reductase large chain signature 359 370 1.3E-29 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 PRINTS PR01183 Ribonucleotide reductase large chain signature 226 245 1.3E-29 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 PRINTS PR01183 Ribonucleotide reductase large chain signature 403 426 1.3E-29 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 PRINTS PR01183 Ribonucleotide reductase large chain signature 552 579 1.3E-29 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 Pfam PF02867 Ribonucleotide reductase, barrel domain 151 667 4.1E-134 T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 SUPERFAMILY SSF48168 4 148 6.28E-39 T 22-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 541 563 - T 22-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 3 683 0.0 T 22-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 Pfam PF08343 Ribonucleotide reductase N-terminal 3 72 1.1E-20 T 22-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMK43_RS06295 42eeef5a14c4a0ed170553d8d1b727e5 683 SUPERFAMILY SSF51998 150 672 1.07E-168 T 22-04-2016 AMK43_RS10790 df2e89ebe92d25b701ebd4b6ae6a91a1 353 SUPERFAMILY SSF56281 36 297 7.69E-22 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS10790 df2e89ebe92d25b701ebd4b6ae6a91a1 353 PANTHER PTHR15032:SF13 4 77 1.8E-115 T 22-04-2016 AMK43_RS10790 df2e89ebe92d25b701ebd4b6ae6a91a1 353 PANTHER PTHR15032:SF13 94 353 1.8E-115 T 22-04-2016 AMK43_RS10790 df2e89ebe92d25b701ebd4b6ae6a91a1 353 Pfam PF13483 Beta-lactamase superfamily domain 42 280 2.6E-12 T 22-04-2016 AMK43_RS10790 df2e89ebe92d25b701ebd4b6ae6a91a1 353 PANTHER PTHR15032 4 77 1.8E-115 T 22-04-2016 AMK43_RS10790 df2e89ebe92d25b701ebd4b6ae6a91a1 353 PANTHER PTHR15032 94 353 1.8E-115 T 22-04-2016 AMK43_RS10790 df2e89ebe92d25b701ebd4b6ae6a91a1 353 Gene3D G3DSA:3.60.15.10 2 335 4.7E-109 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS07425 46983daf4cb93a9ba68f6b4b95a2aad4 556 PANTHER PTHR10025 2 555 0.0 T 22-04-2016 AMK43_RS07425 46983daf4cb93a9ba68f6b4b95a2aad4 556 Gene3D G3DSA:3.30.1510.10 128 246 1.1E-51 T 22-04-2016 AMK43_RS07425 46983daf4cb93a9ba68f6b4b95a2aad4 556 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 556 47.111 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMK43_RS07425 46983daf4cb93a9ba68f6b4b95a2aad4 556 Gene3D G3DSA:3.40.50.300 247 441 3.5E-147 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07425 46983daf4cb93a9ba68f6b4b95a2aad4 556 Gene3D G3DSA:3.40.50.300 12 127 3.5E-147 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07425 46983daf4cb93a9ba68f6b4b95a2aad4 556 Gene3D G3DSA:3.10.410.10 443 532 2.0E-37 T 22-04-2016 AMK43_RS07425 46983daf4cb93a9ba68f6b4b95a2aad4 556 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 327 338 - T 22-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMK43_RS07425 46983daf4cb93a9ba68f6b4b95a2aad4 556 SUPERFAMILY SSF52540 3 554 2.56E-239 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07425 46983daf4cb93a9ba68f6b4b95a2aad4 556 Pfam PF01268 Formate--tetrahydrofolate ligase 1 556 3.3E-266 T 22-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMK43_RS08290 8ab3cf78ac8ee9e4ac23987535ff79c7 805 Gene3D G3DSA:1.10.3210.10 5 110 1.3E-5 T 22-04-2016 IPR006674 HD domain AMK43_RS08290 8ab3cf78ac8ee9e4ac23987535ff79c7 805 SUPERFAMILY SSF52540 259 307 2.25E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08290 8ab3cf78ac8ee9e4ac23987535ff79c7 805 SUPERFAMILY SSF52540 344 595 2.25E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08290 8ab3cf78ac8ee9e4ac23987535ff79c7 805 Pfam PF01966 HD domain 16 111 3.0E-5 T 22-04-2016 IPR006674 HD domain AMK43_RS08290 8ab3cf78ac8ee9e4ac23987535ff79c7 805 Pfam PF00271 Helicase conserved C-terminal domain 470 593 2.1E-4 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS08290 8ab3cf78ac8ee9e4ac23987535ff79c7 805 Gene3D G3DSA:3.40.50.300 233 441 1.1E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08290 8ab3cf78ac8ee9e4ac23987535ff79c7 805 SMART SM00487 247 464 3.3E-5 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK43_RS08290 8ab3cf78ac8ee9e4ac23987535ff79c7 805 Gene3D G3DSA:3.40.50.300 469 631 1.4E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08290 8ab3cf78ac8ee9e4ac23987535ff79c7 805 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 16 219 1.2E-23 T 22-04-2016 IPR006483 CRISPR-associated Cas3-HD domain AMK43_RS08290 8ab3cf78ac8ee9e4ac23987535ff79c7 805 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 266 627 3.7E-70 T 22-04-2016 IPR006474 Helicase Cas3, CRISPR-associated, core AMK43_RS08290 8ab3cf78ac8ee9e4ac23987535ff79c7 805 Pfam PF00270 DEAD/DEAH box helicase 262 432 8.1E-6 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK43_RS08290 8ab3cf78ac8ee9e4ac23987535ff79c7 805 SUPERFAMILY SSF109604 8 115 3.0E-7 T 22-04-2016 AMK43_RS00660 60b35d640f7c93444a852553a1d5af78 380 Gene3D G3DSA:3.20.20.210 6 379 4.0E-110 T 22-04-2016 AMK43_RS00660 60b35d640f7c93444a852553a1d5af78 380 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 12 353 2.9E-20 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 AMK43_RS00660 60b35d640f7c93444a852553a1d5af78 380 SUPERFAMILY SSF51726 11 379 8.76E-78 T 22-04-2016 AMK43_RS00660 60b35d640f7c93444a852553a1d5af78 380 PANTHER PTHR30519 5 379 3.3E-120 T 22-04-2016 AMK43_RS00660 60b35d640f7c93444a852553a1d5af78 380 PANTHER PTHR30519:SF3 5 379 3.3E-120 T 22-04-2016 AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 PRINTS PR00301 70kDa heat shock protein signature 440 456 9.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 PRINTS PR00301 70kDa heat shock protein signature 31 43 9.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 PRINTS PR00301 70kDa heat shock protein signature 173 183 9.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 PRINTS PR00301 70kDa heat shock protein signature 54 62 9.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 PRINTS PR00301 70kDa heat shock protein signature 359 378 9.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 PRINTS PR00301 70kDa heat shock protein signature 3 16 9.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 PRINTS PR00301 70kDa heat shock protein signature 336 356 9.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 PRINTS PR00301 70kDa heat shock protein signature 114 134 9.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 PRINTS PR00301 70kDa heat shock protein signature 305 321 9.4E-78 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 Gene3D G3DSA:3.30.30.30 45 100 3.1E-13 T 22-04-2016 AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 Gene3D G3DSA:3.30.420.40 3 38 6.8E-61 T 22-04-2016 AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 Gene3D G3DSA:3.30.420.40 101 166 6.8E-61 T 22-04-2016 AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 SUPERFAMILY SSF53067 1 159 2.96E-57 T 22-04-2016 AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 Gene3D G3DSA:3.30.420.40 167 200 1.3E-36 T 22-04-2016 AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 Gene3D G3DSA:3.30.420.40 290 332 1.3E-36 T 22-04-2016 AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 167 180 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 308 322 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 PANTHER PTHR19375:SF173 2 608 0.0 T 22-04-2016 AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 Gene3D G3DSA:1.20.1270.10 503 574 1.2E-23 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 22-04-2016 IPR018181 Heat shock protein 70, conserved site AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 Gene3D G3DSA:3.90.640.10 201 285 4.6E-29 T 22-04-2016 AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 Gene3D G3DSA:2.60.34.10 361 502 8.2E-71 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 Pfam PF00012 Hsp70 protein 78 575 6.3E-215 T 22-04-2016 IPR013126 Heat shock protein 70 family AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 SUPERFAMILY SSF53067 161 353 4.8E-66 T 22-04-2016 AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 PANTHER PTHR19375 2 608 0.0 T 22-04-2016 AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 SUPERFAMILY SSF100934 478 578 4.45E-19 T 22-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 574 4.0E-280 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 SUPERFAMILY SSF100920 355 511 4.05E-61 T 22-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain AMK43_RS08500 869ea583dad1ed179a1cf6ee0650d273 608 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 604 36.129 T 22-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 AMK43_RS05110 71d5369f116c60c1ae61143ae805a5a0 163 PANTHER PTHR10681:SF68 1 155 9.0E-13 T 22-04-2016 AMK43_RS05110 71d5369f116c60c1ae61143ae805a5a0 163 SUPERFAMILY SSF52833 29 160 2.3E-23 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS05110 71d5369f116c60c1ae61143ae805a5a0 163 Gene3D G3DSA:3.40.30.10 4 159 4.6E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS05110 71d5369f116c60c1ae61143ae805a5a0 163 PANTHER PTHR10681 1 155 9.0E-13 T 22-04-2016 AMK43_RS05110 71d5369f116c60c1ae61143ae805a5a0 163 Pfam PF00578 AhpC/TSA family 29 141 5.7E-17 T 22-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 AMK43_RS07270 7aa064e50d8ae756d0337c7f3dbd1729 453 Gene3D G3DSA:3.80.30.20 164 352 6.9E-30 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMK43_RS07270 7aa064e50d8ae756d0337c7f3dbd1729 453 PANTHER PTHR11918:SF64 26 361 6.1E-61 T 22-04-2016 AMK43_RS07270 7aa064e50d8ae756d0337c7f3dbd1729 453 SMART SM00729 161 368 2.2E-18 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK43_RS07270 7aa064e50d8ae756d0337c7f3dbd1729 453 Pfam PF02310 B12 binding domain 26 122 7.3E-11 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMK43_RS07270 7aa064e50d8ae756d0337c7f3dbd1729 453 SUPERFAMILY SSF102114 164 364 3.79E-30 T 22-04-2016 AMK43_RS07270 7aa064e50d8ae756d0337c7f3dbd1729 453 Pfam PF04055 Radical SAM superfamily 164 324 1.8E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS07270 7aa064e50d8ae756d0337c7f3dbd1729 453 PANTHER PTHR11918 26 361 6.1E-61 T 22-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein AMK43_RS07165 1fbbbea09650f1019afb202e389b48e5 129 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 124 14.618 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS07165 1fbbbea09650f1019afb202e389b48e5 129 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 21 87 3.0E-11 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS07165 1fbbbea09650f1019afb202e389b48e5 129 PANTHER PTHR13822 10 83 2.8E-15 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS07165 1fbbbea09650f1019afb202e389b48e5 129 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 10 82 2.6E-23 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS07165 1fbbbea09650f1019afb202e389b48e5 129 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 9 124 2.0E-24 T 22-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS07165 1fbbbea09650f1019afb202e389b48e5 129 Gene3D G3DSA:2.60.15.10 7 86 3.5E-22 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS07165 1fbbbea09650f1019afb202e389b48e5 129 SUPERFAMILY SSF51344 10 84 2.62E-19 T 22-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 AMK43_RS01220 7b77925ca8cf3a1a5dad67fedc25ed98 677 SUPERFAMILY SSF109604 326 508 1.33E-10 T 22-04-2016 AMK43_RS01220 7b77925ca8cf3a1a5dad67fedc25ed98 677 PANTHER PTHR30075 2 677 1.1E-255 T 22-04-2016 AMK43_RS01220 7b77925ca8cf3a1a5dad67fedc25ed98 677 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 392 411 7.1E-26 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01220 7b77925ca8cf3a1a5dad67fedc25ed98 677 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 47 59 7.1E-26 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01220 7b77925ca8cf3a1a5dad67fedc25ed98 677 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 312 328 7.1E-26 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01220 7b77925ca8cf3a1a5dad67fedc25ed98 677 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 241 256 7.1E-26 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01220 7b77925ca8cf3a1a5dad67fedc25ed98 677 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 4 17 7.1E-26 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01220 7b77925ca8cf3a1a5dad67fedc25ed98 677 PANTHER PTHR30075:SF2 2 677 1.1E-255 T 22-04-2016 AMK43_RS01220 7b77925ca8cf3a1a5dad67fedc25ed98 677 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 2 674 5.8E-188 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01220 7b77925ca8cf3a1a5dad67fedc25ed98 677 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 1 677 22.962 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01220 7b77925ca8cf3a1a5dad67fedc25ed98 677 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 3 545 4.1E-184 T 22-04-2016 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS02210 43535ffd78ac862d9163fb2e886522f8 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 5.6E-17 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK43_RS02210 43535ffd78ac862d9163fb2e886522f8 300 SUPERFAMILY SSF53850 90 285 9.67E-23 T 22-04-2016 AMK43_RS02210 43535ffd78ac862d9163fb2e886522f8 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK43_RS02210 43535ffd78ac862d9163fb2e886522f8 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK43_RS02210 43535ffd78ac862d9163fb2e886522f8 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK43_RS02210 43535ffd78ac862d9163fb2e886522f8 300 Pfam PF03466 LysR substrate binding domain 90 284 2.3E-23 T 22-04-2016 IPR005119 LysR, substrate-binding AMK43_RS02210 43535ffd78ac862d9163fb2e886522f8 300 Gene3D G3DSA:3.40.190.10 89 206 5.4E-17 T 22-04-2016 AMK43_RS02210 43535ffd78ac862d9163fb2e886522f8 300 PANTHER PTHR30126 1 300 1.1E-61 T 22-04-2016 AMK43_RS02210 43535ffd78ac862d9163fb2e886522f8 300 Gene3D G3DSA:3.40.190.10 207 251 5.4E-4 T 22-04-2016 AMK43_RS02210 43535ffd78ac862d9163fb2e886522f8 300 SUPERFAMILY SSF46785 1 83 1.59E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02210 43535ffd78ac862d9163fb2e886522f8 300 Gene3D G3DSA:1.10.10.10 1 85 1.1E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS11175 24b633b05d21f26c7053afead1bfca4f 343 Gene3D G3DSA:3.90.25.10 284 340 1.6E-49 T 22-04-2016 AMK43_RS11175 24b633b05d21f26c7053afead1bfca4f 343 Gene3D G3DSA:3.90.25.10 183 237 1.6E-49 T 22-04-2016 AMK43_RS11175 24b633b05d21f26c7053afead1bfca4f 343 Gene3D G3DSA:3.40.50.720 1 180 7.1E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS11175 24b633b05d21f26c7053afead1bfca4f 343 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 326 5.6E-141 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS11175 24b633b05d21f26c7053afead1bfca4f 343 PANTHER PTHR10366 290 337 6.1E-188 T 22-04-2016 AMK43_RS11175 24b633b05d21f26c7053afead1bfca4f 343 PANTHER PTHR10366 3 272 6.1E-188 T 22-04-2016 AMK43_RS11175 24b633b05d21f26c7053afead1bfca4f 343 SUPERFAMILY SSF51735 2 332 1.83E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS11175 24b633b05d21f26c7053afead1bfca4f 343 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 2 333 4.4E-147 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 AMK43_RS11175 24b633b05d21f26c7053afead1bfca4f 343 PANTHER PTHR10366:SF32 290 337 6.1E-188 T 22-04-2016 AMK43_RS11175 24b633b05d21f26c7053afead1bfca4f 343 PANTHER PTHR10366:SF32 3 272 6.1E-188 T 22-04-2016 AMK43_RS11175 24b633b05d21f26c7053afead1bfca4f 343 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 336 53.125 T 22-04-2016 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|UniPathway: UPA00128 AMK43_RS02470 49d5909a8d4c45392f3c2f5abc10071e 219 SUPERFAMILY SSF56925 41 217 1.57E-9 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK43_RS02470 49d5909a8d4c45392f3c2f5abc10071e 219 Pfam PF13505 Outer membrane protein beta-barrel domain 9 217 4.6E-16 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel AMK43_RS02470 49d5909a8d4c45392f3c2f5abc10071e 219 Gene3D G3DSA:2.40.160.20 46 217 1.5E-9 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK43_RS04505 ec82ea19b4a9cc364a214f58714cf63c 273 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 146 158 - T 22-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 AMK43_RS04505 ec82ea19b4a9cc364a214f58714cf63c 273 Pfam PF00069 Protein kinase domain 58 260 4.5E-36 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMK43_RS04505 ec82ea19b4a9cc364a214f58714cf63c 273 SMART SM00220 14 272 4.7E-28 T 22-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 AMK43_RS04505 ec82ea19b4a9cc364a214f58714cf63c 273 SUPERFAMILY SSF56112 10 268 1.35E-49 T 22-04-2016 IPR011009 Protein kinase-like domain AMK43_RS04505 ec82ea19b4a9cc364a214f58714cf63c 273 PANTHER PTHR24362 6 273 5.0E-47 T 22-04-2016 AMK43_RS04505 ec82ea19b4a9cc364a214f58714cf63c 273 Gene3D G3DSA:3.30.200.20 9 107 3.0E-14 T 22-04-2016 AMK43_RS04505 ec82ea19b4a9cc364a214f58714cf63c 273 Gene3D G3DSA:1.10.510.10 108 242 4.3E-36 T 22-04-2016 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 604 9.4E-9 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 662 707 2.8E-14 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 505 550 5.5E-8 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 721 767 1.4E-14 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 612 654 4.1E-6 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 771 813 4.4E-11 T 22-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 815 0.0 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 SUPERFAMILY SSF101904 500 823 1.11E-98 T 22-04-2016 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 Gene3D G3DSA:3.90.199.10 32 237 1.1E-124 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 Gene3D G3DSA:3.90.199.10 335 400 1.1E-124 T 22-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 2 820 29.407 T 22-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 SUPERFAMILY SSF56719 32 488 6.8E-180 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 Gene3D G3DSA:3.30.1360.40 238 333 1.2E-37 T 22-04-2016 IPR024946 Arginine repressor C-terminal-like domain AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 Gene3D G3DSA:2.120.10.90 498 816 1.2E-114 T 22-04-2016 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 SMART SM00434 13 466 9.1E-284 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 PANTHER PTHR10169:SF48 12 786 0.0 T 22-04-2016 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 PANTHER PTHR10169 12 786 0.0 T 22-04-2016 AMK43_RS00045 97d7d6e8aafa088ec6cfb35a995f3612 825 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 1.5E-161 T 22-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 SUPERFAMILY SSF46548 329 470 1.99E-36 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 PANTHER PTHR11938:SF90 344 780 1.8E-156 T 22-04-2016 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 Gene3D G3DSA:1.10.1060.10 319 462 8.8E-47 T 22-04-2016 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 SUPERFAMILY SSF52343 104 255 9.69E-31 T 22-04-2016 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 Pfam PF00175 Oxidoreductase NAD-binding domain 110 203 2.2E-5 T 22-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 SUPERFAMILY SSF63380 1 91 2.89E-18 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 339 449 2.0E-44 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 461 768 7.3E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 Gene3D G3DSA:3.50.50.60 702 783 1.0E-8 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 SUPERFAMILY SSF51971 460 713 5.06E-64 T 22-04-2016 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 PANTHER PTHR11938 344 780 1.8E-156 T 22-04-2016 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 Gene3D G3DSA:2.40.30.10 1 91 3.5E-23 T 22-04-2016 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 Gene3D G3DSA:2.10.240.10 225 256 2.2E-4 T 22-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 PRINTS PR00419 Adrenodoxin reductase family signature 462 484 2.1E-16 T 22-04-2016 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 PRINTS PR00419 Adrenodoxin reductase family signature 485 498 2.1E-16 T 22-04-2016 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 PRINTS PR00419 Adrenodoxin reductase family signature 604 618 2.1E-16 T 22-04-2016 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 220 255 5.3E-12 T 22-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 Gene3D G3DSA:3.50.50.60 463 533 2.2E-24 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 Gene3D G3DSA:3.50.50.60 546 701 9.6E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 TIGRFAM TIGR01316 gltA: glutamate synthase (NADPH), homotetrameric 335 780 6.2E-174 T 22-04-2016 IPR006004 Glutamate synthase (NADPH), homotetrameric KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 AMK43_RS04805 4833daabf401f764f164181d7bfbef71 784 Gene3D G3DSA:3.40.50.80 103 217 1.7E-34 T 22-04-2016 AMK43_RS02685 f502bca592d1f8e4855e8f143effb263 429 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 143 158 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 AMK43_RS02685 f502bca592d1f8e4855e8f143effb263 429 SUPERFAMILY SSF53623 6 286 3.21E-76 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS02685 f502bca592d1f8e4855e8f143effb263 429 SUPERFAMILY SSF53244 286 424 8.79E-19 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK43_RS02685 f502bca592d1f8e4855e8f143effb263 429 Pfam PF08245 Mur ligase middle domain 43 264 1.1E-16 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS02685 f502bca592d1f8e4855e8f143effb263 429 PANTHER PTHR11136:SF0 29 429 1.5E-105 T 22-04-2016 AMK43_RS02685 f502bca592d1f8e4855e8f143effb263 429 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 41 64 - T 22-04-2016 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 AMK43_RS02685 f502bca592d1f8e4855e8f143effb263 429 TIGRFAM TIGR01499 folC: bifunctional protein FolC 27 424 1.1E-96 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AMK43_RS02685 f502bca592d1f8e4855e8f143effb263 429 Gene3D G3DSA:3.90.190.20 288 426 5.4E-24 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK43_RS02685 f502bca592d1f8e4855e8f143effb263 429 Gene3D G3DSA:3.40.1190.10 3 287 4.4E-77 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS02685 f502bca592d1f8e4855e8f143effb263 429 Pfam PF02875 Mur ligase family, glutamate ligase domain 286 355 1.2E-6 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK43_RS02685 f502bca592d1f8e4855e8f143effb263 429 PIRSF PIRSF001563 3 429 1.1E-100 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AMK43_RS02685 f502bca592d1f8e4855e8f143effb263 429 PANTHER PTHR11136 29 429 1.5E-105 T 22-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 SMART SM00387 339 449 4.5E-25 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 3.0E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 3.0E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 3.0E-8 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 SUPERFAMILY SSF55874 284 446 1.7E-34 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 SMART SM00388 229 295 5.6E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 Gene3D G3DSA:3.30.565.10 282 447 7.6E-36 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 SUPERFAMILY SSF158472 177 225 1.23E-7 T 22-04-2016 AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 294 3.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 SUPERFAMILY SSF47384 212 294 5.3E-17 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 SMART SM00304 174 228 1.3E-9 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 Pfam PF00672 HAMP domain 155 224 9.9E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 Gene3D G3DSA:1.10.287.130 229 281 9.8E-13 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 PANTHER PTHR24423 168 443 2.7E-66 T 22-04-2016 AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 PANTHER PTHR24423 1 14 2.7E-66 T 22-04-2016 AMK43_RS09905 409c2a2d1ca051f386a3ea3b9e136a05 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 448 1.3E-18 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS10070 86113de322133a9fcaf27b197f303bd4 247 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 237 1.9E-34 T 22-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 AMK43_RS10070 86113de322133a9fcaf27b197f303bd4 247 Gene3D G3DSA:3.30.420.40 133 195 1.6E-5 T 22-04-2016 AMK43_RS10070 86113de322133a9fcaf27b197f303bd4 247 PANTHER PTHR11735 1 149 4.6E-22 T 22-04-2016 AMK43_RS10070 86113de322133a9fcaf27b197f303bd4 247 Gene3D G3DSA:3.30.420.40 1 132 2.0E-23 T 22-04-2016 AMK43_RS10070 86113de322133a9fcaf27b197f303bd4 247 SUPERFAMILY SSF53067 1 104 1.1E-17 T 22-04-2016 AMK43_RS10070 86113de322133a9fcaf27b197f303bd4 247 PANTHER PTHR11735:SF11 1 149 4.6E-22 T 22-04-2016 AMK43_RS10070 86113de322133a9fcaf27b197f303bd4 247 Pfam PF00814 Glycoprotease family 31 174 1.8E-14 T 22-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 Gene3D G3DSA:3.90.800.10 71 196 6.2E-48 T 22-04-2016 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 Gene3D G3DSA:1.10.10.350 408 499 2.9E-15 T 22-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 SUPERFAMILY SSF48163 316 499 6.15E-30 T 22-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 SUPERFAMILY SSF52374 6 310 1.18E-113 T 22-04-2016 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 23 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 6 499 5.3E-155 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 322 3.9E-111 T 22-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 Gene3D G3DSA:1.10.8.70 333 383 1.0E-7 T 22-04-2016 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 PANTHER PTHR11451 449 479 9.1E-112 T 22-04-2016 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 PANTHER PTHR11451 5 350 9.1E-112 T 22-04-2016 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 Gene3D G3DSA:3.40.50.620 6 70 3.4E-46 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 Gene3D G3DSA:3.40.50.620 197 246 3.4E-46 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 Gene3D G3DSA:1.10.1160.10 248 329 1.9E-30 T 22-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 6 499 32.229 T 22-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 PANTHER PTHR11451:SF41 449 479 9.1E-112 T 22-04-2016 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 PANTHER PTHR11451:SF41 5 350 9.1E-112 T 22-04-2016 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 6.7E-22 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 211 219 6.7E-22 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 6.7E-22 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 6.7E-22 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK43_RS06140 65e867af1f7c3c178093fa45e8f34183 500 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 205 6.7E-22 T 22-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 AMK43_RS09240 03dd9398fac8b586e4775ed1102f0e76 217 Pfam PF13526 Protein of unknown function (DUF4125) 13 208 2.0E-77 T 22-04-2016 IPR025191 Protein of unknown function DUF4125 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 798 7.7E-264 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 Pfam PF01588 Putative tRNA binding domain 46 145 4.5E-22 T 22-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 Gene3D G3DSA:3.30.56.20 404 477 7.6E-21 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 SMART SM00874 405 473 1.5E-20 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 PANTHER PTHR10947:SF0 2 798 4.4E-278 T 22-04-2016 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 PANTHER PTHR10947 2 798 4.4E-278 T 22-04-2016 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 Pfam PF03483 B3/4 domain 217 388 4.6E-63 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 792 43.839 T 22-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 Gene3D G3DSA:3.30.56.10 155 184 3.5E-24 T 22-04-2016 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 Gene3D G3DSA:3.30.56.10 1 39 3.5E-24 T 22-04-2016 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 SUPERFAMILY SSF54991 702 798 7.72E-24 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 SMART SM00896 706 798 1.0E-31 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 Gene3D G3DSA:3.30.70.380 708 798 3.8E-26 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 Gene3D G3DSA:3.50.40.10 201 398 5.4E-77 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 Gene3D G3DSA:3.30.930.10 493 692 2.9E-58 T 22-04-2016 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 SUPERFAMILY SSF56037 202 400 2.33E-67 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 SUPERFAMILY SSF50249 36 192 4.28E-48 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 SMART SM00873 215 388 5.2E-78 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 Gene3D G3DSA:2.40.50.140 41 153 3.8E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 SUPERFAMILY SSF46955 406 477 1.65E-15 T 22-04-2016 IPR009061 Putative DNA-binding domain AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 Pfam PF03147 Ferredoxin-fold anticodon binding domain 707 798 3.9E-24 T 22-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 SUPERFAMILY SSF55681 469 692 1.09E-45 T 22-04-2016 AMK43_RS00175 d14e4189805d27f8051f84b3e46f2923 799 Pfam PF03484 tRNA synthetase B5 domain 410 473 1.1E-13 T 22-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 AMK43_RS05910 86cfb7598b6766abc1432e587e81f147 464 Gene3D G3DSA:3.40.50.150 260 462 1.4E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS05910 86cfb7598b6766abc1432e587e81f147 464 Pfam PF01938 TRAM domain 10 61 3.4E-9 T 22-04-2016 IPR002792 TRAM domain AMK43_RS05910 86cfb7598b6766abc1432e587e81f147 464 PANTHER PTHR11061 6 464 7.6E-130 T 22-04-2016 AMK43_RS05910 86cfb7598b6766abc1432e587e81f147 464 SUPERFAMILY SSF53335 82 463 1.21E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS05910 86cfb7598b6766abc1432e587e81f147 464 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 446 456 - T 22-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site AMK43_RS05910 86cfb7598b6766abc1432e587e81f147 464 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 394 425 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site AMK43_RS05910 86cfb7598b6766abc1432e587e81f147 464 Gene3D G3DSA:2.40.50.140 5 76 3.3E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS05910 86cfb7598b6766abc1432e587e81f147 464 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 456 4.4E-107 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AMK43_RS05910 86cfb7598b6766abc1432e587e81f147 464 SUPERFAMILY SSF50249 5 62 1.88E-12 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS05910 86cfb7598b6766abc1432e587e81f147 464 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 94 461 1.1E-24 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AMK43_RS05910 86cfb7598b6766abc1432e587e81f147 464 PANTHER PTHR11061:SF30 6 464 7.6E-130 T 22-04-2016 AMK43_RS00875 7859d3cc47d09917fad2e515619654dd 253 Gene3D G3DSA:3.40.1010.10 2 111 5.4E-33 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AMK43_RS00875 7859d3cc47d09917fad2e515619654dd 253 Gene3D G3DSA:3.30.950.10 112 230 2.7E-37 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 AMK43_RS00875 7859d3cc47d09917fad2e515619654dd 253 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK43_RS00875 7859d3cc47d09917fad2e515619654dd 253 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 208 9.6E-49 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK43_RS00875 7859d3cc47d09917fad2e515619654dd 253 PANTHER PTHR21091 1 208 4.6E-73 T 22-04-2016 AMK43_RS00875 7859d3cc47d09917fad2e515619654dd 253 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 4 248 8.9E-104 T 22-04-2016 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 AMK43_RS00875 7859d3cc47d09917fad2e515619654dd 253 PANTHER PTHR21091:SF17 1 208 4.6E-73 T 22-04-2016 AMK43_RS00875 7859d3cc47d09917fad2e515619654dd 253 SUPERFAMILY SSF53790 1 248 1.18E-67 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK43_RS10225 86bde80c382a46b25e04228f20208239 451 PIRSF PIRSF006351 1 449 6.8E-142 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AMK43_RS10225 86bde80c382a46b25e04228f20208239 451 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 442 1.6E-114 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AMK43_RS10225 86bde80c382a46b25e04228f20208239 451 PANTHER PTHR33989 150 446 1.1E-157 T 22-04-2016 AMK43_RS10225 86bde80c382a46b25e04228f20208239 451 PANTHER PTHR33989 1 124 1.1E-157 T 22-04-2016 AMK43_RS10225 86bde80c382a46b25e04228f20208239 451 Pfam PF02378 Phosphotransferase system, EIIC 24 368 1.4E-48 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMK43_RS10225 86bde80c382a46b25e04228f20208239 451 PANTHER PTHR33989:SF2 150 446 1.1E-157 T 22-04-2016 AMK43_RS10225 86bde80c382a46b25e04228f20208239 451 PANTHER PTHR33989:SF2 1 124 1.1E-157 T 22-04-2016 AMK43_RS06930 0c2b70da849e6e5a7a3e0bd9cbedc4e2 511 Gene3D G3DSA:2.40.440.10 378 490 4.1E-4 T 22-04-2016 AMK43_RS06930 0c2b70da849e6e5a7a3e0bd9cbedc4e2 511 Pfam PF03734 L,D-transpeptidase catalytic domain 373 492 7.5E-6 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK43_RS06930 0c2b70da849e6e5a7a3e0bd9cbedc4e2 511 SUPERFAMILY SSF141523 374 490 1.83E-7 T 22-04-2016 AMK43_RS06750 7733a1b50b755417df93fb4a52e9966d 173 Pfam PF00156 Phosphoribosyl transferase domain 5 153 2.2E-27 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK43_RS06750 7733a1b50b755417df93fb4a52e9966d 173 Gene3D G3DSA:3.40.50.2020 1 172 3.9E-74 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS06750 7733a1b50b755417df93fb4a52e9966d 173 SUPERFAMILY SSF53271 1 172 1.14E-54 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS06750 7733a1b50b755417df93fb4a52e9966d 173 PANTHER PTHR22573 1 173 4.1E-74 T 22-04-2016 AMK43_RS06750 7733a1b50b755417df93fb4a52e9966d 173 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 1 165 9.0E-65 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 AMK43_RS06750 7733a1b50b755417df93fb4a52e9966d 173 PANTHER PTHR22573:SF56 1 173 4.1E-74 T 22-04-2016 AMK43_RS00395 ade6ee0c659179b4454d75d264ca1357 101 ProSitePatterns PS00361 Ribosomal protein S10 signature. 27 42 - T 22-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00395 ade6ee0c659179b4454d75d264ca1357 101 PANTHER PTHR11700 3 99 8.0E-43 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00395 ade6ee0c659179b4454d75d264ca1357 101 Pfam PF00338 Ribosomal protein S10p/S20e 5 99 1.2E-33 T 22-04-2016 IPR027486 Ribosomal protein S10 domain AMK43_RS00395 ade6ee0c659179b4454d75d264ca1357 101 SUPERFAMILY SSF54999 3 99 1.7E-34 T 22-04-2016 IPR027486 Ribosomal protein S10 domain AMK43_RS00395 ade6ee0c659179b4454d75d264ca1357 101 SMART SM01403 5 99 3.1E-49 T 22-04-2016 IPR027486 Ribosomal protein S10 domain AMK43_RS00395 ade6ee0c659179b4454d75d264ca1357 101 PRINTS PR00971 Ribosomal protein S10 family signature 3 16 2.6E-17 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00395 ade6ee0c659179b4454d75d264ca1357 101 PRINTS PR00971 Ribosomal protein S10 family signature 38 53 2.6E-17 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00395 ade6ee0c659179b4454d75d264ca1357 101 PRINTS PR00971 Ribosomal protein S10 family signature 59 73 2.6E-17 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00395 ade6ee0c659179b4454d75d264ca1357 101 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 2 99 2.5E-39 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00395 ade6ee0c659179b4454d75d264ca1357 101 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 1 100 25.117 T 22-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00395 ade6ee0c659179b4454d75d264ca1357 101 Gene3D G3DSA:3.30.70.600 3 99 2.9E-39 T 22-04-2016 IPR027486 Ribosomal protein S10 domain AMK43_RS00865 d8e8b001cd09b1b78ad41a6bf8edd475 109 SUPERFAMILY SSF46785 8 103 1.59E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS00865 d8e8b001cd09b1b78ad41a6bf8edd475 109 PANTHER PTHR33204 9 105 1.7E-41 T 22-04-2016 AMK43_RS00865 d8e8b001cd09b1b78ad41a6bf8edd475 109 Gene3D G3DSA:1.10.10.10 4 106 4.0E-42 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS00865 d8e8b001cd09b1b78ad41a6bf8edd475 109 Pfam PF01638 HxlR-like helix-turn-helix 17 105 1.6E-33 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type AMK43_RS05960 784445edc9625c5ab4c44cbb7a26fc62 465 PANTHER PTHR10283 48 465 1.2E-87 T 22-04-2016 AMK43_RS05960 784445edc9625c5ab4c44cbb7a26fc62 465 PANTHER PTHR10283:SF90 48 465 1.2E-87 T 22-04-2016 AMK43_RS05960 784445edc9625c5ab4c44cbb7a26fc62 465 Pfam PF03606 C4-dicarboxylate anaerobic carrier 47 461 3.6E-97 T 22-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AMK43_RS10725 6b34cdfe6ac686b99fa9587ca675e5ec 327 PANTHER PTHR10210 1 326 5.8E-179 T 22-04-2016 AMK43_RS10725 6b34cdfe6ac686b99fa9587ca675e5ec 327 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 12 321 48.931 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMK43_RS10725 6b34cdfe6ac686b99fa9587ca675e5ec 327 SMART SM01400 12 128 2.6E-69 T 22-04-2016 AMK43_RS10725 6b34cdfe6ac686b99fa9587ca675e5ec 327 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 12 128 1.7E-46 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMK43_RS10725 6b34cdfe6ac686b99fa9587ca675e5ec 327 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 12 321 8.8E-122 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMK43_RS10725 6b34cdfe6ac686b99fa9587ca675e5ec 327 Gene3D G3DSA:3.40.50.2020 7 167 3.0E-69 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS10725 6b34cdfe6ac686b99fa9587ca675e5ec 327 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 136 151 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 AMK43_RS10725 6b34cdfe6ac686b99fa9587ca675e5ec 327 Gene3D G3DSA:3.40.50.2020 168 293 4.4E-55 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS10725 6b34cdfe6ac686b99fa9587ca675e5ec 327 Pfam PF14572 Phosphoribosyl synthetase-associated domain 207 320 1.4E-26 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMK43_RS10725 6b34cdfe6ac686b99fa9587ca675e5ec 327 PANTHER PTHR10210:SF41 1 326 5.8E-179 T 22-04-2016 AMK43_RS10725 6b34cdfe6ac686b99fa9587ca675e5ec 327 SUPERFAMILY SSF53271 77 310 2.5E-64 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS10340 833aada7e62628142f647a4bae3a4f29 156 PIRSF PIRSF004505 2 156 4.2E-47 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK43_RS10340 833aada7e62628142f647a4bae3a4f29 156 SUPERFAMILY SSF75217 3 155 1.11E-42 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases AMK43_RS10340 833aada7e62628142f647a4bae3a4f29 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 2 156 26.055 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK43_RS10340 833aada7e62628142f647a4bae3a4f29 156 Pfam PF02590 Predicted SPOUT methyltransferase 3 155 1.0E-48 T 22-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK43_RS10340 833aada7e62628142f647a4bae3a4f29 156 Gene3D G3DSA:3.40.1280.10 3 156 1.5E-49 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK43_RS10340 833aada7e62628142f647a4bae3a4f29 156 PANTHER PTHR33603:SF1 1 156 7.9E-49 T 22-04-2016 AMK43_RS10340 833aada7e62628142f647a4bae3a4f29 156 PANTHER PTHR33603 1 156 7.9E-49 T 22-04-2016 AMK43_RS10435 6a9511d03cfd772fbf8269dde1f77421 261 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 67 75 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10435 6a9511d03cfd772fbf8269dde1f77421 261 PANTHER PTHR21198 3 261 3.3E-97 T 22-04-2016 AMK43_RS10435 6a9511d03cfd772fbf8269dde1f77421 261 SUPERFAMILY SSF53681 106 259 1.96E-38 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10435 6a9511d03cfd772fbf8269dde1f77421 261 TIGRFAM TIGR00067 glut_race: glutamate racemase 3 244 3.3E-74 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10435 6a9511d03cfd772fbf8269dde1f77421 261 Gene3D G3DSA:3.40.50.1860 2 169 1.4E-58 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10435 6a9511d03cfd772fbf8269dde1f77421 261 SUPERFAMILY SSF53681 1 104 7.52E-37 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10435 6a9511d03cfd772fbf8269dde1f77421 261 PANTHER PTHR21198:SF2 3 261 3.3E-97 T 22-04-2016 AMK43_RS10435 6a9511d03cfd772fbf8269dde1f77421 261 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 176 186 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10435 6a9511d03cfd772fbf8269dde1f77421 261 Hamap MF_00258 Glutamate racemase [murI]. 1 252 36.568 T 22-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10435 6a9511d03cfd772fbf8269dde1f77421 261 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 209 1.4E-38 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS02035 20c5aed73ad32f70612608bd8a262d69 87 PANTHER PTHR39080:SF1 1 68 2.6E-13 T 22-04-2016 AMK43_RS02035 20c5aed73ad32f70612608bd8a262d69 87 Pfam PF00830 Ribosomal L28 family 3 57 3.0E-20 T 22-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 AMK43_RS02035 20c5aed73ad32f70612608bd8a262d69 87 TIGRFAM TIGR00009 L28: ribosomal protein bL28 3 55 3.6E-17 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02035 20c5aed73ad32f70612608bd8a262d69 87 PANTHER PTHR39080 1 68 2.6E-13 T 22-04-2016 AMK43_RS02035 20c5aed73ad32f70612608bd8a262d69 87 Gene3D G3DSA:2.30.170.40 1 66 1.1E-20 T 22-04-2016 AMK43_RS02035 20c5aed73ad32f70612608bd8a262d69 87 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 64 16.918 T 22-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02035 20c5aed73ad32f70612608bd8a262d69 87 SUPERFAMILY SSF143800 3 69 5.3E-21 T 22-04-2016 AMK43_RS08405 9c6a7de50adef6f6bc1e61c28e038c24 363 Gene3D G3DSA:3.40.50.1970 3 171 1.2E-61 T 22-04-2016 AMK43_RS08405 9c6a7de50adef6f6bc1e61c28e038c24 363 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 358 2.9E-109 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK43_RS08405 9c6a7de50adef6f6bc1e61c28e038c24 363 Pfam PF01761 3-dehydroquinate synthase 66 335 1.3E-93 T 22-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK43_RS08405 9c6a7de50adef6f6bc1e61c28e038c24 363 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 363 37.762 T 22-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK43_RS08405 9c6a7de50adef6f6bc1e61c28e038c24 363 PIRSF PIRSF001455 8 362 4.7E-102 T 22-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK43_RS08405 9c6a7de50adef6f6bc1e61c28e038c24 363 PANTHER PTHR21090 1 363 4.9E-132 T 22-04-2016 AMK43_RS08405 9c6a7de50adef6f6bc1e61c28e038c24 363 Gene3D G3DSA:1.20.1090.10 172 360 1.7E-53 T 22-04-2016 AMK43_RS08405 9c6a7de50adef6f6bc1e61c28e038c24 363 SUPERFAMILY SSF56796 5 360 1.28E-93 T 22-04-2016 AMK43_RS03950 0e2e8d4cffcffea8e104369bd9c789cb 440 ProSitePatterns PS00211 ABC transporters family signature. 368 382 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS03950 0e2e8d4cffcffea8e104369bd9c789cb 440 SUPERFAMILY SSF52540 1 179 6.39E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03950 0e2e8d4cffcffea8e104369bd9c789cb 440 Gene3D G3DSA:3.40.50.300 210 438 3.1E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03950 0e2e8d4cffcffea8e104369bd9c789cb 440 ProSitePatterns PS00211 ABC transporters family signature. 92 106 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS03950 0e2e8d4cffcffea8e104369bd9c789cb 440 PANTHER PTHR24220 214 438 1.2E-54 T 22-04-2016 AMK43_RS03950 0e2e8d4cffcffea8e104369bd9c789cb 440 Pfam PF00005 ABC transporter 1 119 2.4E-15 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS03950 0e2e8d4cffcffea8e104369bd9c789cb 440 Pfam PF00005 ABC transporter 230 395 6.6E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS03950 0e2e8d4cffcffea8e104369bd9c789cb 440 Gene3D G3DSA:3.40.50.300 1 180 9.5E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03950 0e2e8d4cffcffea8e104369bd9c789cb 440 SUPERFAMILY SSF52540 213 440 1.23E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03950 0e2e8d4cffcffea8e104369bd9c789cb 440 SMART SM00382 238 438 3.0E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS04765 246ea79cefdef1d6cfcfa6876efce84f 467 SUPERFAMILY SSF51338 2 64 2.11E-15 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS04765 246ea79cefdef1d6cfcfa6876efce84f 467 SUPERFAMILY SSF51556 54 386 2.46E-101 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK43_RS04765 246ea79cefdef1d6cfcfa6876efce84f 467 SUPERFAMILY SSF51338 353 460 8.1E-38 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS04765 246ea79cefdef1d6cfcfa6876efce84f 467 Pfam PF01979 Amidohydrolase family 50 439 1.5E-30 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK43_RS04765 246ea79cefdef1d6cfcfa6876efce84f 467 Gene3D G3DSA:2.30.40.10 1 68 1.3E-25 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS04765 246ea79cefdef1d6cfcfa6876efce84f 467 PANTHER PTHR11647:SF1 1 458 1.5E-182 T 22-04-2016 AMK43_RS04765 246ea79cefdef1d6cfcfa6876efce84f 467 Gene3D G3DSA:2.30.40.10 380 464 1.5E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS04765 246ea79cefdef1d6cfcfa6876efce84f 467 PANTHER PTHR11647 1 458 1.5E-182 T 22-04-2016 AMK43_RS04765 246ea79cefdef1d6cfcfa6876efce84f 467 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 1 458 2.9E-173 T 22-04-2016 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: REACT_18266 AMK43_RS04765 246ea79cefdef1d6cfcfa6876efce84f 467 Gene3D G3DSA:3.20.20.140 69 379 7.4E-109 T 22-04-2016 AMK43_RS06515 729dd0f3f790a0bf1c3a97644a617ff8 369 SUPERFAMILY SSF48452 35 184 3.41E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS06515 729dd0f3f790a0bf1c3a97644a617ff8 369 PANTHER PTHR23083 276 301 6.6E-12 T 22-04-2016 AMK43_RS06515 729dd0f3f790a0bf1c3a97644a617ff8 369 PANTHER PTHR23083 34 208 6.6E-12 T 22-04-2016 AMK43_RS06515 729dd0f3f790a0bf1c3a97644a617ff8 369 Gene3D G3DSA:1.25.40.10 227 305 9.3E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS06515 729dd0f3f790a0bf1c3a97644a617ff8 369 Gene3D G3DSA:1.25.40.10 36 191 9.3E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS06515 729dd0f3f790a0bf1c3a97644a617ff8 369 SMART SM00028 88 122 11.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS06515 729dd0f3f790a0bf1c3a97644a617ff8 369 SMART SM00028 123 156 7.4E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS04500 28d1e94ca84cf12f592928b3ae586893 366 SUPERFAMILY SSF81606 49 194 8.76E-6 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 153 164 - T 22-04-2016 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 PANTHER PTHR30523 1 932 0.0 T 22-04-2016 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 15 932 17.598 T 22-04-2016 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 Gene3D G3DSA:1.20.1440.90 296 422 1.2E-22 T 22-04-2016 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 SUPERFAMILY SSF51621 26 932 5.02E-281 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 587 599 - T 22-04-2016 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 Pfam PF00311 Phosphoenolpyruvate carboxylase 148 932 4.4E-270 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 PANTHER PTHR30523:SF0 1 932 0.0 T 22-04-2016 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 419 439 7.5E-55 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 205 221 7.5E-55 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 760 786 7.5E-55 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 585 605 7.5E-55 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 265 280 7.5E-55 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 152 165 7.5E-55 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMK43_RS02040 8044a610aac03a63fb1adb09fbb615c9 932 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 627 656 7.5E-55 T 22-04-2016 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 AMK43_RS01070 2dc3118616370ca007d19e57cc199c1a 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 95 1.8E-20 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS01070 2dc3118616370ca007d19e57cc199c1a 105 Gene3D G3DSA:3.40.50.2300 1 99 4.0E-39 T 22-04-2016 AMK43_RS01070 2dc3118616370ca007d19e57cc199c1a 105 PANTHER PTHR30505 1 101 4.1E-38 T 22-04-2016 AMK43_RS01070 2dc3118616370ca007d19e57cc199c1a 105 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 88 1.0E-33 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 AMK43_RS01070 2dc3118616370ca007d19e57cc199c1a 105 SUPERFAMILY SSF52794 2 99 2.09E-34 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS07715 673bed2fef1c56daaffcbf4d12803738 334 PANTHER PTHR11835 2 334 4.5E-187 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMK43_RS07715 673bed2fef1c56daaffcbf4d12803738 334 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 330 9.0E-109 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK43_RS07715 673bed2fef1c56daaffcbf4d12803738 334 Gene3D G3DSA:3.40.718.10 1 334 1.2E-137 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK43_RS07715 673bed2fef1c56daaffcbf4d12803738 334 SUPERFAMILY SSF53659 1 334 8.83E-127 T 22-04-2016 AMK43_RS07715 673bed2fef1c56daaffcbf4d12803738 334 SMART SM01329 4 330 1.1E-176 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK43_RS07715 673bed2fef1c56daaffcbf4d12803738 334 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 226 245 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMK43_RS04930 4104d9637c21c3fbb2a450be679bce17 189 Gene3D G3DSA:3.90.226.10 4 189 3.2E-88 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS04930 4104d9637c21c3fbb2a450be679bce17 189 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 89 100 - T 22-04-2016 IPR018215 ClpP, Ser active site AMK43_RS04930 4104d9637c21c3fbb2a450be679bce17 189 SUPERFAMILY SSF52096 11 189 6.12E-73 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS04930 4104d9637c21c3fbb2a450be679bce17 189 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 111 124 - T 22-04-2016 IPR033135 ClpP, histidine active site AMK43_RS04930 4104d9637c21c3fbb2a450be679bce17 189 PANTHER PTHR10381 4 189 4.7E-128 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMK43_RS04930 4104d9637c21c3fbb2a450be679bce17 189 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 2 189 41.012 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK43_RS04930 4104d9637c21c3fbb2a450be679bce17 189 PRINTS PR00127 Clp protease catalytic subunit P signature 89 106 2.0E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK43_RS04930 4104d9637c21c3fbb2a450be679bce17 189 PRINTS PR00127 Clp protease catalytic subunit P signature 58 78 2.0E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK43_RS04930 4104d9637c21c3fbb2a450be679bce17 189 PRINTS PR00127 Clp protease catalytic subunit P signature 110 129 2.0E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK43_RS04930 4104d9637c21c3fbb2a450be679bce17 189 PRINTS PR00127 Clp protease catalytic subunit P signature 167 186 2.0E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK43_RS04930 4104d9637c21c3fbb2a450be679bce17 189 PRINTS PR00127 Clp protease catalytic subunit P signature 18 33 2.0E-53 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK43_RS04930 4104d9637c21c3fbb2a450be679bce17 189 Pfam PF00574 Clp protease 12 189 5.5E-86 T 22-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA AMK43_RS04930 4104d9637c21c3fbb2a450be679bce17 189 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 3 189 3.3E-97 T 22-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 AMK43_RS10255 93fbc1407ce01a039ea0a265fcf76b05 303 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 3 296 39.473 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 AMK43_RS10255 93fbc1407ce01a039ea0a265fcf76b05 303 Gene3D G3DSA:3.40.50.10490 5 248 1.0E-78 T 22-04-2016 AMK43_RS10255 93fbc1407ce01a039ea0a265fcf76b05 303 Pfam PF01380 SIS domain 129 209 8.8E-7 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK43_RS10255 93fbc1407ce01a039ea0a265fcf76b05 303 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 186 203 - T 22-04-2016 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 AMK43_RS10255 93fbc1407ce01a039ea0a265fcf76b05 303 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 7 294 3.3E-112 T 22-04-2016 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|UniPathway: UPA00342 AMK43_RS10255 93fbc1407ce01a039ea0a265fcf76b05 303 SUPERFAMILY SSF53697 6 248 2.22E-66 T 22-04-2016 AMK43_RS10255 93fbc1407ce01a039ea0a265fcf76b05 303 PANTHER PTHR10088 1 287 4.5E-122 T 22-04-2016 AMK43_RS00445 671c9c36cda034b1de01f9bf1d29796e 86 Pfam PF00366 Ribosomal protein S17 13 79 9.3E-31 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00445 671c9c36cda034b1de01f9bf1d29796e 86 PRINTS PR00973 Ribosomal protein S17 family signature 69 76 6.2E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00445 671c9c36cda034b1de01f9bf1d29796e 86 PRINTS PR00973 Ribosomal protein S17 family signature 27 50 6.2E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00445 671c9c36cda034b1de01f9bf1d29796e 86 PRINTS PR00973 Ribosomal protein S17 family signature 59 69 6.2E-11 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00445 671c9c36cda034b1de01f9bf1d29796e 86 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 8 79 5.7E-33 T 22-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00445 671c9c36cda034b1de01f9bf1d29796e 86 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 84 24.25 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00445 671c9c36cda034b1de01f9bf1d29796e 86 Gene3D G3DSA:2.40.50.140 8 85 2.1E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS00445 671c9c36cda034b1de01f9bf1d29796e 86 SUPERFAMILY SSF50249 8 85 9.0E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS00445 671c9c36cda034b1de01f9bf1d29796e 86 ProSitePatterns PS00056 Ribosomal protein S17 signature. 59 71 - T 22-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00445 671c9c36cda034b1de01f9bf1d29796e 86 PANTHER PTHR10744 5 85 3.6E-35 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00445 671c9c36cda034b1de01f9bf1d29796e 86 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 8 79 3.0E-17 T 22-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS07660 5d9d3310c86020b9a2cfd309803716c7 248 SMART SM00382 32 219 2.0E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS07660 5d9d3310c86020b9a2cfd309803716c7 248 PANTHER PTHR24220 9 247 9.2E-128 T 22-04-2016 AMK43_RS07660 5d9d3310c86020b9a2cfd309803716c7 248 SUPERFAMILY SSF52540 7 241 9.56E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07660 5d9d3310c86020b9a2cfd309803716c7 248 PIRSF PIRSF039085 4 247 2.3E-110 T 22-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 AMK43_RS07660 5d9d3310c86020b9a2cfd309803716c7 248 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS07660 5d9d3310c86020b9a2cfd309803716c7 248 Gene3D G3DSA:3.40.50.300 6 243 3.2E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07660 5d9d3310c86020b9a2cfd309803716c7 248 Pfam PF00005 ABC transporter 23 171 2.8E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS07660 5d9d3310c86020b9a2cfd309803716c7 248 PANTHER PTHR24220:SF327 9 247 9.2E-128 T 22-04-2016 AMK43_RS04410 be47e779a0f6db72c2ccd59d786ec64f 245 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 196 3.3E-31 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 AMK43_RS04410 be47e779a0f6db72c2ccd59d786ec64f 245 SUPERFAMILY SSF56784 5 232 1.49E-30 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS04410 be47e779a0f6db72c2ccd59d786ec64f 245 Gene3D G3DSA:3.40.50.1000 91 215 2.0E-32 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS04410 be47e779a0f6db72c2ccd59d786ec64f 245 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 6 207 1.6E-52 T 22-04-2016 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial AMK43_RS04410 be47e779a0f6db72c2ccd59d786ec64f 245 PANTHER PTHR10000 1 235 3.4E-65 T 22-04-2016 AMK43_RS04410 be47e779a0f6db72c2ccd59d786ec64f 245 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 194 6.6E-18 T 22-04-2016 AMK43_RS04410 be47e779a0f6db72c2ccd59d786ec64f 245 PANTHER PTHR10000:SF11 1 235 3.4E-65 T 22-04-2016 AMK43_RS10100 d7f47725a02844cadc5862dc68613630 446 PANTHER PTHR32024 8 446 1.9E-168 T 22-04-2016 AMK43_RS10100 d7f47725a02844cadc5862dc68613630 446 Pfam PF02386 Cation transport protein 37 425 6.0E-52 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AMK43_RS10100 d7f47725a02844cadc5862dc68613630 446 PANTHER PTHR32024:SF1 8 446 1.9E-168 T 22-04-2016 AMK43_RS06185 15b60f0afb7738dfc98ddc6b38f35b9b 374 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 255 370 8.0E-16 T 22-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06185 15b60f0afb7738dfc98ddc6b38f35b9b 374 Gene3D G3DSA:3.10.150.10 254 371 4.0E-21 T 22-04-2016 AMK43_RS06185 15b60f0afb7738dfc98ddc6b38f35b9b 374 SUPERFAMILY SSF55979 255 370 1.32E-20 T 22-04-2016 AMK43_RS06185 15b60f0afb7738dfc98ddc6b38f35b9b 374 PIRSF PIRSF000804 2 373 2.5E-70 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06185 15b60f0afb7738dfc98ddc6b38f35b9b 374 SUPERFAMILY SSF55979 125 247 4.83E-17 T 22-04-2016 AMK43_RS06185 15b60f0afb7738dfc98ddc6b38f35b9b 374 PANTHER PTHR30478 4 374 5.1E-84 T 22-04-2016 AMK43_RS06185 15b60f0afb7738dfc98ddc6b38f35b9b 374 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 4 371 1.8E-57 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06185 15b60f0afb7738dfc98ddc6b38f35b9b 374 SMART SM00480 18 368 4.3E-41 T 22-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06185 15b60f0afb7738dfc98ddc6b38f35b9b 374 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 246 4.6E-17 T 22-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06185 15b60f0afb7738dfc98ddc6b38f35b9b 374 Gene3D G3DSA:3.10.150.10 116 248 1.9E-21 T 22-04-2016 AMK43_RS06185 15b60f0afb7738dfc98ddc6b38f35b9b 374 SUPERFAMILY SSF55979 3 118 9.24E-20 T 22-04-2016 AMK43_RS06185 15b60f0afb7738dfc98ddc6b38f35b9b 374 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 3 117 2.9E-18 T 22-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06185 15b60f0afb7738dfc98ddc6b38f35b9b 374 Gene3D G3DSA:3.10.150.10 4 115 3.2E-20 T 22-04-2016 AMK43_RS04915 a112d4abdd226e68e8592b96e55a357c 120 SUPERFAMILY SSF89919 1 105 2.88E-21 T 22-04-2016 IPR023799 Ribosome-binding factor A domain AMK43_RS04915 a112d4abdd226e68e8592b96e55a357c 120 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 22-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 AMK43_RS04915 a112d4abdd226e68e8592b96e55a357c 120 PANTHER PTHR33515 1 120 3.2E-25 T 22-04-2016 AMK43_RS04915 a112d4abdd226e68e8592b96e55a357c 120 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 116 3.4E-19 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMK43_RS04915 a112d4abdd226e68e8592b96e55a357c 120 Gene3D G3DSA:3.30.300.20 1 119 1.6E-26 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta AMK43_RS04915 a112d4abdd226e68e8592b96e55a357c 120 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 118 16.863 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMK43_RS04915 a112d4abdd226e68e8592b96e55a357c 120 Pfam PF02033 Ribosome-binding factor A 5 111 2.7E-19 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMK43_RS04915 a112d4abdd226e68e8592b96e55a357c 120 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 11 98 6.0E-10 T 22-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 AMK43_RS00510 83567deaccc8256ffb081d31055ae5da 166 PANTHER PTHR36007:SF1 23 156 1.9E-38 T 22-04-2016 AMK43_RS00510 83567deaccc8256ffb081d31055ae5da 166 Pfam PF06695 Putative small multi-drug export protein 33 151 2.1E-42 T 22-04-2016 IPR009577 Putative small multi-drug export AMK43_RS00510 83567deaccc8256ffb081d31055ae5da 166 PANTHER PTHR36007 23 156 1.9E-38 T 22-04-2016 AMK43_RS06365 9988c0384d4af7319256f3284b195cb3 478 PANTHER PTHR11061 9 477 2.3E-110 T 22-04-2016 AMK43_RS06365 9988c0384d4af7319256f3284b195cb3 478 Gene3D G3DSA:3.40.50.150 270 471 3.1E-61 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS06365 9988c0384d4af7319256f3284b195cb3 478 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 290 472 1.8E-19 T 22-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 AMK43_RS06365 9988c0384d4af7319256f3284b195cb3 478 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 82 465 2.4E-73 T 22-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 AMK43_RS06365 9988c0384d4af7319256f3284b195cb3 478 SUPERFAMILY SSF53335 83 470 3.52E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS06365 9988c0384d4af7319256f3284b195cb3 478 PANTHER PTHR11061:SF30 9 477 2.3E-110 T 22-04-2016 AMK43_RS06365 9988c0384d4af7319256f3284b195cb3 478 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 403 434 - T 22-04-2016 IPR030390 RNA methyltransferase TrmA, active site AMK43_RS09765 fc55040879538344007406f7b9a73731 387 Pfam PF01546 Peptidase family M20/M25/M40 70 379 4.9E-29 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK43_RS09765 fc55040879538344007406f7b9a73731 387 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 12 369 3.1E-105 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 AMK43_RS09765 fc55040879538344007406f7b9a73731 387 PANTHER PTHR11014:SF63 3 387 2.4E-134 T 22-04-2016 AMK43_RS09765 fc55040879538344007406f7b9a73731 387 PANTHER PTHR11014 3 387 2.4E-134 T 22-04-2016 AMK43_RS09765 fc55040879538344007406f7b9a73731 387 SUPERFAMILY SSF53187 2 193 3.14E-82 T 22-04-2016 AMK43_RS09765 fc55040879538344007406f7b9a73731 387 SUPERFAMILY SSF53187 294 385 3.14E-82 T 22-04-2016 AMK43_RS09765 fc55040879538344007406f7b9a73731 387 Gene3D G3DSA:3.30.70.360 177 291 2.4E-31 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS09765 fc55040879538344007406f7b9a73731 387 PIRSF PIRSF005962 1 387 1.6E-119 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 AMK43_RS09765 fc55040879538344007406f7b9a73731 387 Pfam PF07687 Peptidase dimerisation domain 178 279 1.6E-9 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS09765 fc55040879538344007406f7b9a73731 387 Gene3D G3DSA:3.40.630.10 292 385 8.7E-95 T 22-04-2016 AMK43_RS09765 fc55040879538344007406f7b9a73731 387 Gene3D G3DSA:3.40.630.10 2 174 8.7E-95 T 22-04-2016 AMK43_RS09765 fc55040879538344007406f7b9a73731 387 SUPERFAMILY SSF55031 178 286 3.14E-24 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS04150 ae97116c2fadd2273cb3b14b27f35b9c 144 SUPERFAMILY SSF46785 11 142 1.52E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS04150 ae97116c2fadd2273cb3b14b27f35b9c 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 2.3E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS04150 ae97116c2fadd2273cb3b14b27f35b9c 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 2.3E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS04150 ae97116c2fadd2273cb3b14b27f35b9c 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 2.3E-11 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS04150 ae97116c2fadd2273cb3b14b27f35b9c 144 PANTHER PTHR33164 8 139 7.1E-27 T 22-04-2016 AMK43_RS04150 ae97116c2fadd2273cb3b14b27f35b9c 144 PANTHER PTHR33164:SF4 8 139 7.1E-27 T 22-04-2016 AMK43_RS04150 ae97116c2fadd2273cb3b14b27f35b9c 144 SMART SM00347 30 130 4.5E-23 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS04150 ae97116c2fadd2273cb3b14b27f35b9c 144 Gene3D G3DSA:1.10.10.10 12 142 1.1E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS04150 ae97116c2fadd2273cb3b14b27f35b9c 144 Pfam PF01047 MarR family 37 94 5.8E-13 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS00645 06da0565a1a9415cf0690075ec74b573 232 SUPERFAMILY SSF53335 3 219 6.88E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS00645 06da0565a1a9415cf0690075ec74b573 232 PANTHER PTHR10108:SF739 190 228 7.0E-15 T 22-04-2016 AMK43_RS00645 06da0565a1a9415cf0690075ec74b573 232 PANTHER PTHR10108:SF739 1 174 7.0E-15 T 22-04-2016 AMK43_RS00645 06da0565a1a9415cf0690075ec74b573 232 Pfam PF13847 Methyltransferase domain 31 137 9.6E-10 T 22-04-2016 IPR025714 Methyltransferase domain AMK43_RS00645 06da0565a1a9415cf0690075ec74b573 232 PANTHER PTHR10108 190 228 7.0E-15 T 22-04-2016 AMK43_RS00645 06da0565a1a9415cf0690075ec74b573 232 PANTHER PTHR10108 1 174 7.0E-15 T 22-04-2016 AMK43_RS00645 06da0565a1a9415cf0690075ec74b573 232 Gene3D G3DSA:3.40.50.150 24 217 5.2E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS09985 e7e6d22e53e5489195b794e44206f1cc 63 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 10 55 1.2E-6 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS09985 e7e6d22e53e5489195b794e44206f1cc 63 SUPERFAMILY SSF52794 9 62 1.73E-15 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS09985 e7e6d22e53e5489195b794e44206f1cc 63 Gene3D G3DSA:3.40.50.270 9 62 2.6E-17 T 22-04-2016 AMK43_RS09985 e7e6d22e53e5489195b794e44206f1cc 63 PANTHER PTHR34581 9 63 2.8E-19 T 22-04-2016 AMK43_RS09985 e7e6d22e53e5489195b794e44206f1cc 63 PANTHER PTHR34581:SF2 9 63 2.8E-19 T 22-04-2016 AMK43_RS00465 d9827359e64ff19f8808ac1dfbed11bc 95 Pfam PF00253 Ribosomal protein S14p/S29e 42 94 1.6E-25 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00465 d9827359e64ff19f8808ac1dfbed11bc 95 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 95 25.824 T 22-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid AMK43_RS00465 d9827359e64ff19f8808ac1dfbed11bc 95 PANTHER PTHR19836 1 95 9.0E-49 T 22-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00465 d9827359e64ff19f8808ac1dfbed11bc 95 SUPERFAMILY SSF57716 2 95 2.42E-32 T 22-04-2016 AMK43_RS00465 d9827359e64ff19f8808ac1dfbed11bc 95 ProSitePatterns PS00527 Ribosomal protein S14 signature. 57 79 - T 22-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 AMK43_RS00465 d9827359e64ff19f8808ac1dfbed11bc 95 Gene3D G3DSA:4.10.830.10 37 95 3.0E-29 T 22-04-2016 AMK43_RS05605 ee38702f265c02a67f5d27eadad12683 235 PANTHER PTHR39209:SF2 1 234 1.6E-44 T 22-04-2016 AMK43_RS05605 ee38702f265c02a67f5d27eadad12683 235 PANTHER PTHR39209 1 234 1.6E-44 T 22-04-2016 AMK43_RS05605 ee38702f265c02a67f5d27eadad12683 235 Pfam PF03483 B3/4 domain 67 195 2.4E-23 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMK43_RS05605 ee38702f265c02a67f5d27eadad12683 235 Gene3D G3DSA:3.50.40.10 78 194 2.3E-17 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK43_RS05605 ee38702f265c02a67f5d27eadad12683 235 SUPERFAMILY SSF56037 51 194 1.05E-31 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK43_RS05605 ee38702f265c02a67f5d27eadad12683 235 SMART SM00873 64 218 9.0E-12 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMK43_RS09360 b55bdddca268e3c21cb9cad0e6e382c2 211 Gene3D G3DSA:3.40.970.10 18 55 2.0E-11 T 22-04-2016 IPR011320 Ribonuclease H1, N-terminal AMK43_RS09360 b55bdddca268e3c21cb9cad0e6e382c2 211 Pfam PF01693 Caulimovirus viroplasmin 18 52 3.3E-10 T 22-04-2016 IPR011320 Ribonuclease H1, N-terminal AMK43_RS09360 b55bdddca268e3c21cb9cad0e6e382c2 211 SUPERFAMILY SSF53098 122 200 2.15E-8 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS09360 b55bdddca268e3c21cb9cad0e6e382c2 211 Gene3D G3DSA:3.30.420.10 122 188 1.5E-5 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS09360 b55bdddca268e3c21cb9cad0e6e382c2 211 SUPERFAMILY SSF55658 12 53 5.75E-6 T 22-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal AMK43_RS01970 fdab28e354e8c6cb74aefa11f0117e85 228 Pfam PF00005 ABC transporter 24 164 1.2E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS01970 fdab28e354e8c6cb74aefa11f0117e85 228 Gene3D G3DSA:3.40.50.300 6 222 5.1E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01970 fdab28e354e8c6cb74aefa11f0117e85 228 PANTHER PTHR24220 10 209 1.3E-52 T 22-04-2016 AMK43_RS01970 fdab28e354e8c6cb74aefa11f0117e85 228 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS01970 fdab28e354e8c6cb74aefa11f0117e85 228 SMART SM00382 33 218 3.7E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS01970 fdab28e354e8c6cb74aefa11f0117e85 228 SUPERFAMILY SSF52540 6 215 3.16E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 Pfam PF00873 AcrB/AcrD/AcrF family 4 995 1.4E-221 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 SUPERFAMILY SSF82693 268 324 7.06E-16 T 22-04-2016 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 SUPERFAMILY SSF82693 140 182 7.06E-16 T 22-04-2016 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 Gene3D G3DSA:3.30.70.1430 40 130 5.3E-22 T 22-04-2016 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 SUPERFAMILY SSF82866 774 1000 1.24E-46 T 22-04-2016 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 SUPERFAMILY SSF82866 291 491 6.28E-38 T 22-04-2016 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 Gene3D G3DSA:1.10.3850.10 780 997 2.2E-58 T 22-04-2016 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 Gene3D G3DSA:1.10.3850.10 273 491 7.6E-51 T 22-04-2016 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 PANTHER PTHR32063:SF0 1 1015 0.0 T 22-04-2016 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 SUPERFAMILY SSF82693 40 129 3.79E-20 T 22-04-2016 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 SUPERFAMILY SSF82714 689 771 2.62E-13 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 SUPERFAMILY SSF82714 183 265 2.49E-16 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 PANTHER PTHR32063 1 1015 0.0 T 22-04-2016 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 Gene3D G3DSA:3.30.2090.10 183 265 1.6E-19 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 Gene3D G3DSA:3.30.2090.10 689 772 2.3E-15 T 22-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 5.3E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.3E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 5.3E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 5.3E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.3E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.3E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK43_RS01850 eb11073bbb9427b5ae38ad2ef787e3db 1015 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 5.3E-33 T 22-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 AMK43_RS03520 80f4cdd5eff8105196d7c393b93359c7 210 Pfam PF12952 Domain of unknown function (DUF3841) 15 193 5.6E-55 T 22-04-2016 IPR024211 Protein of unknown function DUF3841 AMK43_RS00440 4a852f619b58b2eb5432e12bf7e23664 68 Pfam PF00831 Ribosomal L29 protein 4 63 1.8E-20 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00440 4a852f619b58b2eb5432e12bf7e23664 68 SUPERFAMILY SSF46561 1 64 3.66E-17 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00440 4a852f619b58b2eb5432e12bf7e23664 68 PANTHER PTHR10916 1 63 4.7E-18 T 22-04-2016 AMK43_RS00440 4a852f619b58b2eb5432e12bf7e23664 68 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 63 15.811 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00440 4a852f619b58b2eb5432e12bf7e23664 68 Gene3D G3DSA:1.10.287.310 1 64 1.1E-21 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00440 4a852f619b58b2eb5432e12bf7e23664 68 ProSitePatterns PS00579 Ribosomal protein L29 signature. 42 56 - T 22-04-2016 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00440 4a852f619b58b2eb5432e12bf7e23664 68 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 63 7.1E-20 T 22-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00980 54b26129fdcc1c94585797eacce2fbf3 305 SUPERFAMILY SSF53850 10 301 1.22E-68 T 22-04-2016 AMK43_RS00980 54b26129fdcc1c94585797eacce2fbf3 305 Gene3D G3DSA:3.40.190.10 99 236 3.0E-40 T 22-04-2016 AMK43_RS00980 54b26129fdcc1c94585797eacce2fbf3 305 PANTHER PTHR30006 14 304 1.5E-61 T 22-04-2016 AMK43_RS00980 54b26129fdcc1c94585797eacce2fbf3 305 Pfam PF13343 Bacterial extracellular solute-binding protein 51 255 9.3E-32 T 22-04-2016 AMK43_RS00980 54b26129fdcc1c94585797eacce2fbf3 305 PIRSF PIRSF002825 1 304 9.4E-76 T 22-04-2016 IPR026045 Ferric binding protein AMK43_RS00980 54b26129fdcc1c94585797eacce2fbf3 305 PANTHER PTHR30006:SF2 14 304 1.5E-61 T 22-04-2016 AMK43_RS00980 54b26129fdcc1c94585797eacce2fbf3 305 Gene3D G3DSA:3.40.190.10 237 294 4.8E-32 T 22-04-2016 AMK43_RS00980 54b26129fdcc1c94585797eacce2fbf3 305 Gene3D G3DSA:3.40.190.10 1 96 4.8E-32 T 22-04-2016 AMK43_RS03975 5a8c2bfebf8d9b11bcf6edd5c45e2195 208 PANTHER PTHR30586:SF0 1 208 5.7E-74 T 22-04-2016 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 AMK43_RS03975 5a8c2bfebf8d9b11bcf6edd5c45e2195 208 PIRSF PIRSF006102 1 208 3.1E-59 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AMK43_RS03975 5a8c2bfebf8d9b11bcf6edd5c45e2195 208 PANTHER PTHR30586 1 208 5.7E-74 T 22-04-2016 AMK43_RS03975 5a8c2bfebf8d9b11bcf6edd5c45e2195 208 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 195 4.4E-58 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AMK43_RS03625 ef745477caaf12fda41ace876372500c 359 SUPERFAMILY SSF101821 67 177 1.3E-27 T 22-04-2016 AMK43_RS03625 ef745477caaf12fda41ace876372500c 359 SUPERFAMILY SSF53187 7 79 2.17E-54 T 22-04-2016 AMK43_RS03625 ef745477caaf12fda41ace876372500c 359 SUPERFAMILY SSF53187 172 342 2.17E-54 T 22-04-2016 AMK43_RS03625 ef745477caaf12fda41ace876372500c 359 Gene3D G3DSA:2.40.30.40 69 158 4.8E-29 T 22-04-2016 IPR023367 Peptidase M42, domain 2 AMK43_RS03625 ef745477caaf12fda41ace876372500c 359 Pfam PF05343 M42 glutamyl aminopeptidase 44 334 1.1E-93 T 22-04-2016 IPR008007 Peptidase M42 AMK43_RS03625 ef745477caaf12fda41ace876372500c 359 Gene3D G3DSA:3.40.630.10 166 351 8.5E-74 T 22-04-2016 AMK43_RS03625 ef745477caaf12fda41ace876372500c 359 Gene3D G3DSA:3.40.630.10 2 68 8.5E-74 T 22-04-2016 AMK43_RS03625 ef745477caaf12fda41ace876372500c 359 PANTHER PTHR32481 1 353 1.5E-121 T 22-04-2016 AMK43_RS03625 ef745477caaf12fda41ace876372500c 359 PIRSF PIRSF001123 4 353 7.5E-109 T 22-04-2016 IPR008007 Peptidase M42 AMK43_RS03625 ef745477caaf12fda41ace876372500c 359 PANTHER PTHR32481:SF0 1 353 1.5E-121 T 22-04-2016 AMK43_RS04960 f369dd0caeb335796fe2efd0bfee6aa7 286 Gene3D G3DSA:3.20.20.140 1 42 1.5E-28 T 22-04-2016 AMK43_RS04960 f369dd0caeb335796fe2efd0bfee6aa7 286 Gene3D G3DSA:3.20.20.140 81 284 1.5E-28 T 22-04-2016 AMK43_RS04960 f369dd0caeb335796fe2efd0bfee6aa7 286 PANTHER PTHR21039 2 285 5.0E-36 T 22-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 AMK43_RS04960 f369dd0caeb335796fe2efd0bfee6aa7 286 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 4 260 1.2E-28 T 22-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 AMK43_RS04960 f369dd0caeb335796fe2efd0bfee6aa7 286 SUPERFAMILY SSF89550 1 41 1.44E-33 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 AMK43_RS04960 f369dd0caeb335796fe2efd0bfee6aa7 286 SUPERFAMILY SSF89550 80 283 1.44E-33 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 AMK43_RS10995 1dfd6140063c8ddfedf91beeed26b0b4 579 SMART SM00382 353 539 1.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS10995 1dfd6140063c8ddfedf91beeed26b0b4 579 SUPERFAMILY SSF90123 18 312 1.44E-50 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS10995 1dfd6140063c8ddfedf91beeed26b0b4 579 ProSitePatterns PS00211 ABC transporters family signature. 465 479 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS10995 1dfd6140063c8ddfedf91beeed26b0b4 579 Pfam PF00664 ABC transporter transmembrane region 22 284 1.6E-22 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS10995 1dfd6140063c8ddfedf91beeed26b0b4 579 Gene3D G3DSA:1.20.1560.10 20 294 4.2E-43 T 22-04-2016 AMK43_RS10995 1dfd6140063c8ddfedf91beeed26b0b4 579 Gene3D G3DSA:3.40.50.300 328 556 1.2E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10995 1dfd6140063c8ddfedf91beeed26b0b4 579 PANTHER PTHR24221 20 574 2.5E-153 T 22-04-2016 AMK43_RS10995 1dfd6140063c8ddfedf91beeed26b0b4 579 Pfam PF00005 ABC transporter 344 492 2.7E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS10995 1dfd6140063c8ddfedf91beeed26b0b4 579 SUPERFAMILY SSF52540 324 563 1.27E-82 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05265 280a3732c9b8b9380452329190b397b5 179 Gene3D G3DSA:2.30.110.10 22 179 3.1E-39 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK43_RS05265 280a3732c9b8b9380452329190b397b5 179 PANTHER PTHR32145:SF7 1 167 7.9E-85 T 22-04-2016 AMK43_RS05265 280a3732c9b8b9380452329190b397b5 179 SUPERFAMILY SSF50475 22 179 3.93E-19 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK43_RS05265 280a3732c9b8b9380452329190b397b5 179 PANTHER PTHR32145 1 167 7.9E-85 T 22-04-2016 AMK43_RS05265 280a3732c9b8b9380452329190b397b5 179 Pfam PF01613 Flavin reductase like domain 27 178 3.6E-11 T 22-04-2016 IPR002563 Flavin reductase like domain GO:0010181 AMK43_RS03810 a4658ff25ad117be1d6effd18f10a012 366 Pfam PF03054 tRNA methyl transferase 5 361 1.1E-143 T 22-04-2016 AMK43_RS03810 a4658ff25ad117be1d6effd18f10a012 366 Gene3D G3DSA:2.30.30.280 215 280 3.7E-30 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 AMK43_RS03810 a4658ff25ad117be1d6effd18f10a012 366 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 5 361 1.5E-142 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMK43_RS03810 a4658ff25ad117be1d6effd18f10a012 366 SUPERFAMILY SSF52402 3 246 1.17E-61 T 22-04-2016 AMK43_RS03810 a4658ff25ad117be1d6effd18f10a012 366 PANTHER PTHR11933:SF10 1 366 1.4E-200 T 22-04-2016 AMK43_RS03810 a4658ff25ad117be1d6effd18f10a012 366 PANTHER PTHR11933 1 366 1.4E-200 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMK43_RS03810 a4658ff25ad117be1d6effd18f10a012 366 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 5 362 41.998 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMK43_RS03810 a4658ff25ad117be1d6effd18f10a012 366 Gene3D G3DSA:3.40.50.620 3 213 1.7E-100 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS03810 a4658ff25ad117be1d6effd18f10a012 366 Gene3D G3DSA:2.40.30.10 283 365 4.0E-30 T 22-04-2016 AMK43_RS03525 38db3c9c4c0e58a732f79841edfb19f1 499 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 48 492 3.6E-141 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AMK43_RS03525 38db3c9c4c0e58a732f79841edfb19f1 499 PANTHER PTHR30047:SF2 6 495 7.6E-198 T 22-04-2016 AMK43_RS03525 38db3c9c4c0e58a732f79841edfb19f1 499 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 10 492 8.4E-176 T 22-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 AMK43_RS03525 38db3c9c4c0e58a732f79841edfb19f1 499 ProSitePatterns PS01303 BCCT family of transporters signature. 312 321 - T 22-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 AMK43_RS03525 38db3c9c4c0e58a732f79841edfb19f1 499 PANTHER PTHR30047 6 495 7.6E-198 T 22-04-2016 AMK43_RS06525 a0c70334c8de39fe6919f67d73f281c7 401 Pfam PF13308 YARHG domain 322 395 6.7E-21 T 22-04-2016 IPR025582 YARHG domain AMK43_RS06525 a0c70334c8de39fe6919f67d73f281c7 401 SMART SM01324 317 397 6.6E-21 T 22-04-2016 IPR025582 YARHG domain AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 PANTHER PTHR22807:SF30 1 432 2.1E-72 T 22-04-2016 AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 Gene3D G3DSA:1.10.940.10 5 150 3.3E-20 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 SUPERFAMILY SSF53335 141 432 4.94E-56 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 SUPERFAMILY SSF48013 11 149 5.23E-15 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 Pfam PF01029 NusB family 17 124 2.8E-14 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 PANTHER PTHR22807 1 432 2.1E-72 T 22-04-2016 AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 431 3.0E-45 T 22-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 146 232 1.9E-8 T 22-04-2016 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 312 323 - T 22-04-2016 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 415 432 2.2E-23 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 2.2E-23 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 363 379 2.2E-23 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 2.2E-23 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 313 325 2.2E-23 T 22-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK43_RS05615 df1a5da2bf6cdd01d1159bb50bce200d 435 Gene3D G3DSA:3.40.50.150 229 432 3.4E-51 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS04820 90a6f111cae611862237b061bca12857 392 Pfam PF00999 Sodium/hydrogen exchanger family 7 375 2.0E-44 T 22-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 AMK43_RS04820 90a6f111cae611862237b061bca12857 392 PANTHER PTHR31102 2 389 8.2E-79 T 22-04-2016 AMK43_RS08950 1135c49da1c0b046f3b945ca8fa40213 620 Gene3D G3DSA:3.40.50.270 336 420 2.0E-7 T 22-04-2016 AMK43_RS08950 1135c49da1c0b046f3b945ca8fa40213 620 SUPERFAMILY SSF63520 229 326 7.98E-11 T 22-04-2016 IPR011608 PRD domain GO:0006355 AMK43_RS08950 1135c49da1c0b046f3b945ca8fa40213 620 PANTHER PTHR36203 7 619 3.6E-59 T 22-04-2016 AMK43_RS08950 1135c49da1c0b046f3b945ca8fa40213 620 Gene3D G3DSA:3.40.930.10 474 617 2.2E-39 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS08950 1135c49da1c0b046f3b945ca8fa40213 620 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 337 419 8.9E-5 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS08950 1135c49da1c0b046f3b945ca8fa40213 620 PANTHER PTHR36203:SF1 7 619 3.6E-59 T 22-04-2016 AMK43_RS08950 1135c49da1c0b046f3b945ca8fa40213 620 Pfam PF00874 PRD domain 236 325 1.2E-11 T 22-04-2016 IPR011608 PRD domain GO:0006355 AMK43_RS08950 1135c49da1c0b046f3b945ca8fa40213 620 SUPERFAMILY SSF52794 334 422 6.8E-9 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS08950 1135c49da1c0b046f3b945ca8fa40213 620 SUPERFAMILY SSF55804 475 617 6.1E-26 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 AMK43_RS08950 1135c49da1c0b046f3b945ca8fa40213 620 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 478 617 6.6E-23 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS08950 1135c49da1c0b046f3b945ca8fa40213 620 Gene3D G3DSA:1.10.1790.10 233 329 7.9E-12 T 22-04-2016 IPR011608 PRD domain GO:0006355 AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 SUPERFAMILY SSF55681 146 487 7.37E-113 T 22-04-2016 AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 10 488 1.7E-189 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 PANTHER PTHR22594 1 493 4.4E-245 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 13 489 43.004 T 22-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 PRINTS PR00982 Lysyl-tRNA synthetase signature 371 387 3.3E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 215 3.3E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 PRINTS PR00982 Lysyl-tRNA synthetase signature 228 241 3.3E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 PRINTS PR00982 Lysyl-tRNA synthetase signature 246 263 3.3E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 PRINTS PR00982 Lysyl-tRNA synthetase signature 183 193 3.3E-38 T 22-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 Gene3D G3DSA:2.40.50.140 9 139 7.7E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 SUPERFAMILY SSF50249 5 139 1.24E-31 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 Gene3D G3DSA:3.30.930.10 141 485 1.1E-118 T 22-04-2016 AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 PANTHER PTHR22594:SF4 1 493 4.4E-245 T 22-04-2016 AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 Pfam PF00152 tRNA synthetases class II (D, K and N) 147 486 1.7E-82 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS10325 2c009e219522e58d3e0565bd756e93ee 493 Pfam PF01336 OB-fold nucleic acid binding domain 56 129 1.8E-13 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMK43_RS11405 1fde1382a81a3c6aa2bed84511a72957 188 Gene3D G3DSA:3.40.50.1470 1 187 2.2E-63 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMK43_RS11405 1fde1382a81a3c6aa2bed84511a72957 188 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 32.172 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMK43_RS11405 1fde1382a81a3c6aa2bed84511a72957 188 PANTHER PTHR17224 1 188 3.9E-61 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMK43_RS11405 1fde1382a81a3c6aa2bed84511a72957 188 SUPERFAMILY SSF53178 1 186 2.62E-58 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMK43_RS11405 1fde1382a81a3c6aa2bed84511a72957 188 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 22-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 AMK43_RS11405 1fde1382a81a3c6aa2bed84511a72957 188 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 186 1.8E-54 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMK43_RS11405 1fde1382a81a3c6aa2bed84511a72957 188 Pfam PF01195 Peptidyl-tRNA hydrolase 3 185 5.3E-52 T 22-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 AMK43_RS11405 1fde1382a81a3c6aa2bed84511a72957 188 PANTHER PTHR17224:SF1 1 188 3.9E-61 T 22-04-2016 AMK43_RS09335 4899daff37f1f97784ca5138c71856c8 1026 SUPERFAMILY SSF52743 267 427 2.62E-30 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK43_RS09335 4899daff37f1f97784ca5138c71856c8 1026 SUPERFAMILY SSF52743 105 235 2.62E-30 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK43_RS09335 4899daff37f1f97784ca5138c71856c8 1026 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 470 500 1.7E-11 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat AMK43_RS09335 4899daff37f1f97784ca5138c71856c8 1026 SUPERFAMILY SSF103515 711 1026 1.96E-53 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS09335 4899daff37f1f97784ca5138c71856c8 1026 Gene3D G3DSA:3.40.50.200 107 427 7.8E-29 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK43_RS09335 4899daff37f1f97784ca5138c71856c8 1026 Pfam PF12951 Passenger-associated-transport-repeat 471 500 1.0E-9 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat AMK43_RS09335 4899daff37f1f97784ca5138c71856c8 1026 Pfam PF03797 Autotransporter beta-domain 748 1010 2.7E-45 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS09335 4899daff37f1f97784ca5138c71856c8 1026 SMART SM00869 749 1016 4.3E-36 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS09335 4899daff37f1f97784ca5138c71856c8 1026 Gene3D G3DSA:2.40.128.130 705 1026 3.4E-59 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS09335 4899daff37f1f97784ca5138c71856c8 1026 Pfam PF00082 Subtilase family 111 416 7.0E-26 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK43_RS03430 d25cb0c8810e497b974a54d3234440dd 150 Gene3D G3DSA:1.10.10.10 3 139 6.2E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03430 d25cb0c8810e497b974a54d3234440dd 150 PANTHER PTHR18964:SF129 28 140 1.1E-20 T 22-04-2016 AMK43_RS03430 d25cb0c8810e497b974a54d3234440dd 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 9.3E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS03430 d25cb0c8810e497b974a54d3234440dd 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 9.3E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS03430 d25cb0c8810e497b974a54d3234440dd 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 9.3E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS03430 d25cb0c8810e497b974a54d3234440dd 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 9.3E-7 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS03430 d25cb0c8810e497b974a54d3234440dd 150 Pfam PF01047 MarR family 35 89 5.2E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS03430 d25cb0c8810e497b974a54d3234440dd 150 SUPERFAMILY SSF46785 6 142 4.8E-27 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03430 d25cb0c8810e497b974a54d3234440dd 150 SMART SM00347 22 125 9.6E-18 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS03430 d25cb0c8810e497b974a54d3234440dd 150 PANTHER PTHR18964 28 140 1.1E-20 T 22-04-2016 AMK43_RS01480 d73379480e42b82a3f522b24f3a790e3 246 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 246 30.381 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS01480 d73379480e42b82a3f522b24f3a790e3 246 PANTHER PTHR11142 1 246 3.2E-68 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS01480 d73379480e42b82a3f522b24f3a790e3 246 PIRSF PIRSF001430 1 246 4.1E-68 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS01480 d73379480e42b82a3f522b24f3a790e3 246 SUPERFAMILY SSF55120 1 246 1.31E-66 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS01480 d73379480e42b82a3f522b24f3a790e3 246 Gene3D G3DSA:3.30.70.660 107 246 1.8E-32 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS01480 d73379480e42b82a3f522b24f3a790e3 246 PANTHER PTHR11142:SF0 1 246 3.2E-68 T 22-04-2016 AMK43_RS01480 d73379480e42b82a3f522b24f3a790e3 246 Gene3D G3DSA:3.30.70.580 1 105 2.5E-32 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS01480 d73379480e42b82a3f522b24f3a790e3 246 Pfam PF01416 tRNA pseudouridine synthase 144 246 2.6E-18 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS01480 d73379480e42b82a3f522b24f3a790e3 246 Pfam PF01416 tRNA pseudouridine synthase 7 104 3.2E-7 T 22-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS01480 d73379480e42b82a3f522b24f3a790e3 246 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 241 9.8E-56 T 22-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 Gene3D G3DSA:1.10.3370.10 9 434 2.3E-129 T 22-04-2016 IPR023201 SecY subunit domain AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 PANTHER PTHR10906 6 434 1.2E-151 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 Hamap MF_01465 Protein translocase subunit SecY [secY]. 11 430 26.433 T 22-04-2016 IPR026593 Protein translocase subunit SecY AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 22 424 2.4E-109 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 ProSitePatterns PS00755 Protein secY signature 1. 74 93 - T 22-04-2016 IPR030659 SecY conserved site AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 PIRSF PIRSF004557 4 438 5.3E-113 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 Pfam PF00344 SecY translocase 74 413 1.6E-96 T 22-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 PANTHER PTHR10906:SF2 6 434 1.2E-151 T 22-04-2016 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 73 93 2.4E-81 T 22-04-2016 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 174 197 2.4E-81 T 22-04-2016 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 2.4E-81 T 22-04-2016 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 114 137 2.4E-81 T 22-04-2016 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 366 384 2.4E-81 T 22-04-2016 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 148 173 2.4E-81 T 22-04-2016 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 2.4E-81 T 22-04-2016 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 24 42 2.4E-81 T 22-04-2016 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 PRINTS PR00303 Preprotein translocase SecY subunit signature 399 417 2.4E-81 T 22-04-2016 AMK43_RS00500 7aa18432e9fbab4ad682994e77479636 438 SUPERFAMILY SSF103491 7 421 1.28E-107 T 22-04-2016 IPR023201 SecY subunit domain AMK43_RS05875 fcba43487beaa840f76608f6a3ba6488 158 Pfam PF13358 DDE superfamily endonuclease 1 143 3.3E-26 T 22-04-2016 AMK43_RS07060 92a319464efd7bd53a016c0a87512a03 91 SUPERFAMILY SSF47729 1 90 2.65E-28 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK43_RS07060 92a319464efd7bd53a016c0a87512a03 91 SMART SM00411 1 90 1.1E-32 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK43_RS07060 92a319464efd7bd53a016c0a87512a03 91 Gene3D G3DSA:4.10.520.10 1 90 1.7E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK43_RS07060 92a319464efd7bd53a016c0a87512a03 91 Pfam PF00216 Bacterial DNA-binding protein 1 89 2.4E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK43_RS07060 92a319464efd7bd53a016c0a87512a03 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.7E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK43_RS07060 92a319464efd7bd53a016c0a87512a03 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.7E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK43_RS07060 92a319464efd7bd53a016c0a87512a03 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.7E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK43_RS07060 92a319464efd7bd53a016c0a87512a03 91 PANTHER PTHR33175 1 89 2.5E-35 T 22-04-2016 AMK43_RS08255 747e60e67c72e98608f6f6ec95085651 332 Gene3D G3DSA:3.40.50.2300 53 176 6.6E-19 T 22-04-2016 AMK43_RS08255 747e60e67c72e98608f6f6ec95085651 332 SUPERFAMILY SSF53822 91 331 6.85E-38 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK43_RS08255 747e60e67c72e98608f6f6ec95085651 332 PANTHER PTHR30146 2 332 5.0E-67 T 22-04-2016 AMK43_RS08255 747e60e67c72e98608f6f6ec95085651 332 PANTHER PTHR30146:SF4 2 332 5.0E-67 T 22-04-2016 AMK43_RS08255 747e60e67c72e98608f6f6ec95085651 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 2.6E-18 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK43_RS08255 747e60e67c72e98608f6f6ec95085651 332 SMART SM00354 3 73 2.4E-19 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK43_RS08255 747e60e67c72e98608f6f6ec95085651 332 SUPERFAMILY SSF47413 2 59 2.93E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS08255 747e60e67c72e98608f6f6ec95085651 332 Gene3D G3DSA:3.40.50.2300 177 312 2.2E-29 T 22-04-2016 AMK43_RS08255 747e60e67c72e98608f6f6ec95085651 332 Pfam PF13377 Periplasmic binding protein-like domain 172 330 2.4E-24 T 22-04-2016 AMK43_RS08255 747e60e67c72e98608f6f6ec95085651 332 Gene3D G3DSA:1.10.260.40 2 52 1.9E-23 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS08255 747e60e67c72e98608f6f6ec95085651 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 8.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK43_RS08255 747e60e67c72e98608f6f6ec95085651 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 8.2E-6 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK43_RS05540 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 Gene3D G3DSA:1.10.10.60 60 157 6.9E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS05540 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 PANTHER PTHR33795:SF1 1 169 9.6E-74 T 22-04-2016 AMK43_RS05540 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 SUPERFAMILY SSF46689 55 160 2.15E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS05540 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 Pfam PF01527 Transposase 55 142 2.9E-6 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AMK43_RS05540 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 PANTHER PTHR33795 1 169 9.6E-74 T 22-04-2016 AMK43_RS00145 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 Gene3D G3DSA:1.10.10.60 60 157 6.9E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS00145 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 PANTHER PTHR33795:SF1 1 169 9.6E-74 T 22-04-2016 AMK43_RS00145 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 SUPERFAMILY SSF46689 55 160 2.15E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS00145 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 Pfam PF01527 Transposase 55 142 2.9E-6 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AMK43_RS00145 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 PANTHER PTHR33795 1 169 9.6E-74 T 22-04-2016 AMK43_RS01305 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 Gene3D G3DSA:1.10.10.60 60 157 6.9E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS01305 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 PANTHER PTHR33795:SF1 1 169 9.6E-74 T 22-04-2016 AMK43_RS01305 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 SUPERFAMILY SSF46689 55 160 2.15E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS01305 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 Pfam PF01527 Transposase 55 142 2.9E-6 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AMK43_RS01305 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 PANTHER PTHR33795 1 169 9.6E-74 T 22-04-2016 AMK43_RS10375 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 Gene3D G3DSA:1.10.10.60 60 157 6.9E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS10375 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 PANTHER PTHR33795:SF1 1 169 9.6E-74 T 22-04-2016 AMK43_RS10375 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 SUPERFAMILY SSF46689 55 160 2.15E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS10375 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 Pfam PF01527 Transposase 55 142 2.9E-6 T 22-04-2016 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 AMK43_RS10375 76bb1316c7a9fa8bf3f29a8bdd9755ee 169 PANTHER PTHR33795 1 169 9.6E-74 T 22-04-2016 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 PANTHER PTHR22912:SF147 1 440 9.5E-150 T 22-04-2016 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 SUPERFAMILY SSF51905 1 313 6.31E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 PANTHER PTHR22912 1 440 9.5E-150 T 22-04-2016 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.1E-20 T 22-04-2016 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 1.1E-20 T 22-04-2016 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.1E-20 T 22-04-2016 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.1E-20 T 22-04-2016 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 260 282 1.1E-20 T 22-04-2016 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 334 428 4.5E-16 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 Gene3D G3DSA:3.50.50.60 113 312 4.2E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 Gene3D G3DSA:3.30.390.30 334 442 5.6E-38 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 305 1.9E-66 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 SUPERFAMILY SSF55424 321 442 2.41E-35 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 Gene3D G3DSA:3.50.50.60 1 112 3.1E-17 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 9.3E-14 T 22-04-2016 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 9.3E-14 T 22-04-2016 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 9.3E-14 T 22-04-2016 AMK43_RS05835 ed597ba4654de6a024ec88d3dc684924 443 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 275 282 9.3E-14 T 22-04-2016 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 Pfam PF06723 MreB/Mbl protein 14 334 2.0E-123 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 3.6E-44 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 132 151 3.6E-44 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 300 326 3.6E-44 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 3.6E-44 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 187 207 3.6E-44 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 PANTHER PTHR19375 10 326 2.1E-120 T 22-04-2016 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 Gene3D G3DSA:3.30.420.40 13 159 2.7E-30 T 22-04-2016 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 Gene3D G3DSA:3.90.640.10 187 258 5.5E-28 T 22-04-2016 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 14 335 7.2E-117 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 Gene3D G3DSA:3.30.420.40 263 317 3.0E-30 T 22-04-2016 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 Gene3D G3DSA:3.30.420.40 160 186 3.0E-30 T 22-04-2016 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 SUPERFAMILY SSF53067 13 148 5.29E-25 T 22-04-2016 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 SUPERFAMILY SSF53067 150 328 4.42E-46 T 22-04-2016 AMK43_RS02100 85a16107a92e223da930e92e121263c0 343 PANTHER PTHR19375:SF117 10 326 2.1E-120 T 22-04-2016 AMK43_RS00410 941fe3e86509492c992cdf69aacfbff8 94 SUPERFAMILY SSF54189 1 89 6.47E-31 T 22-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00410 941fe3e86509492c992cdf69aacfbff8 94 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 94 20.942 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00410 941fe3e86509492c992cdf69aacfbff8 94 Gene3D G3DSA:3.30.70.330 2 93 1.1E-33 T 22-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 AMK43_RS00410 941fe3e86509492c992cdf69aacfbff8 94 PANTHER PTHR11620 5 89 5.7E-27 T 22-04-2016 AMK43_RS00410 941fe3e86509492c992cdf69aacfbff8 94 Pfam PF00276 Ribosomal protein L23 5 89 2.3E-31 T 22-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 AMK43_RS03490 5b3f155e6996fbae2f713061424a5749 428 PIRSF PIRSF011588 1 428 3.5E-202 T 22-04-2016 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta GO:0050485|GO:0055114 AMK43_RS03490 5b3f155e6996fbae2f713061424a5749 428 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 1 425 1.6E-196 T 22-04-2016 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 AMK43_RS09495 a629cd7fa9062fbad66f09df4db33605 309 PANTHER PTHR37955 1 307 8.5E-66 T 22-04-2016 AMK43_RS09495 a629cd7fa9062fbad66f09df4db33605 309 PANTHER PTHR37955:SF1 1 307 8.5E-66 T 22-04-2016 AMK43_RS09495 a629cd7fa9062fbad66f09df4db33605 309 Pfam PF03595 Voltage-dependent anion channel 14 299 1.1E-24 T 22-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 AMK43_RS02225 c6db923887efdaefc29f1222d950f5f5 98 Gene3D G3DSA:3.30.70.930 2 97 3.7E-37 T 22-04-2016 IPR029756 MTH1187/YkoF-like AMK43_RS02225 c6db923887efdaefc29f1222d950f5f5 98 Pfam PF01910 Thiamine-binding protein 5 96 1.7E-23 T 22-04-2016 IPR002767 Thiamine-binding protein AMK43_RS02225 c6db923887efdaefc29f1222d950f5f5 98 SUPERFAMILY SSF89957 3 96 3.79E-24 T 22-04-2016 IPR029756 MTH1187/YkoF-like AMK43_RS02225 c6db923887efdaefc29f1222d950f5f5 98 PANTHER PTHR33777 1 95 5.1E-19 T 22-04-2016 AMK43_RS06630 b092482330699ff82b431acfa9489636 148 Pfam PF04266 ASCH domain 35 147 1.3E-27 T 22-04-2016 IPR007374 ASCH domain AMK43_RS06630 b092482330699ff82b431acfa9489636 148 SUPERFAMILY SSF88697 2 147 8.45E-45 T 22-04-2016 IPR015947 PUA-like domain AMK43_RS06630 b092482330699ff82b431acfa9489636 148 PANTHER PTHR39203 1 146 1.5E-37 T 22-04-2016 AMK43_RS06630 b092482330699ff82b431acfa9489636 148 PIRSF PIRSF021320 1 148 4.0E-48 T 22-04-2016 IPR009326 Protein of unknown function DUF984 AMK43_RS06630 b092482330699ff82b431acfa9489636 148 Gene3D G3DSA:3.10.400.10 1 147 4.8E-55 T 22-04-2016 AMK43_RS06630 b092482330699ff82b431acfa9489636 148 SMART SM01022 27 147 2.5E-37 T 22-04-2016 IPR007374 ASCH domain AMK43_RS02185 017fab64782ef576e32a4cee9231bc63 374 Gene3D G3DSA:3.30.450.90 8 123 5.7E-33 T 22-04-2016 AMK43_RS02185 017fab64782ef576e32a4cee9231bc63 374 PANTHER PTHR30258:SF1 11 347 3.8E-116 T 22-04-2016 AMK43_RS02185 017fab64782ef576e32a4cee9231bc63 374 SUPERFAMILY SSF52540 10 334 1.66E-66 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02185 017fab64782ef576e32a4cee9231bc63 374 Gene3D G3DSA:3.40.50.300 129 373 1.6E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02185 017fab64782ef576e32a4cee9231bc63 374 Pfam PF00437 Type II/IV secretion system protein 22 290 5.6E-67 T 22-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 AMK43_RS02185 017fab64782ef576e32a4cee9231bc63 374 PANTHER PTHR30258 11 347 3.8E-116 T 22-04-2016 AMK43_RS05945 d5634fd04704094d1c121502b461637a 331 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 306 322 6.4E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK43_RS05945 d5634fd04704094d1c121502b461637a 331 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 291 306 6.4E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK43_RS05945 d5634fd04704094d1c121502b461637a 331 Pfam PF12833 Helix-turn-helix domain 245 323 3.3E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS05945 d5634fd04704094d1c121502b461637a 331 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 276 318 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK43_RS05945 d5634fd04704094d1c121502b461637a 331 PANTHER PTHR11019:SF141 75 330 9.7E-27 T 22-04-2016 AMK43_RS05945 d5634fd04704094d1c121502b461637a 331 SMART SM00342 238 322 9.8E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS05945 d5634fd04704094d1c121502b461637a 331 PANTHER PTHR11019 75 330 9.7E-27 T 22-04-2016 AMK43_RS05945 d5634fd04704094d1c121502b461637a 331 SUPERFAMILY SSF46689 276 323 2.87E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS05945 d5634fd04704094d1c121502b461637a 331 Gene3D G3DSA:1.10.10.60 277 325 8.7E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS05945 d5634fd04704094d1c121502b461637a 331 Gene3D G3DSA:1.10.10.60 240 275 8.7E-6 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS05945 d5634fd04704094d1c121502b461637a 331 Gene3D G3DSA:2.60.120.10 59 111 3.5E-4 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 PIRSF PIRSF005499 1 714 1.0E-291 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 SMART SM00316 626 696 3.0E-23 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 Pfam PF03725 3' exoribonuclease family, domain 2 149 210 5.9E-15 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 Pfam PF03725 3' exoribonuclease family, domain 2 467 535 8.4E-6 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 Pfam PF01138 3' exoribonuclease family, domain 1 329 462 2.5E-17 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 3.9E-18 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 SUPERFAMILY SSF55666 138 227 1.7E-27 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 SMART SM00322 558 623 1.1E-10 T 22-04-2016 IPR004087 K Homology domain GO:0003676 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 243 326 1.2E-9 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 SUPERFAMILY SSF54211 298 494 6.58E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 Gene3D G3DSA:1.10.10.400 230 320 1.4E-14 T 22-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 SUPERFAMILY SSF55666 456 554 3.93E-28 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 SUPERFAMILY SSF54791 561 646 6.07E-21 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 Gene3D G3DSA:2.40.50.140 624 698 2.9E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 Pfam PF00013 KH domain 564 619 1.5E-10 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 699 29.774 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 697 1.1E-302 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 Pfam PF00575 S1 RNA binding domain 626 696 3.5E-18 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 Gene3D G3DSA:3.30.1370.10 558 623 6.9E-21 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 PANTHER PTHR11252:SF0 9 703 0.0 T 22-04-2016 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 SUPERFAMILY SSF54211 6 144 4.35E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 Gene3D G3DSA:3.30.230.70 321 549 4.0E-83 T 22-04-2016 IPR027408 PNPase/RNase PH domain AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 Gene3D G3DSA:3.30.230.70 6 224 1.3E-79 T 22-04-2016 IPR027408 PNPase/RNase PH domain AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 PANTHER PTHR11252 9 703 0.0 T 22-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 AMK43_RS05570 015469803654162c2385b97dd8ea0c53 714 SUPERFAMILY SSF50249 626 703 3.43E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS03570 9fa3af0822d97f5820e59f431cd5a175 263 Gene3D G3DSA:3.60.10.10 1 261 3.7E-22 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK43_RS03570 9fa3af0822d97f5820e59f431cd5a175 263 PANTHER PTHR15822 1 263 1.6E-31 T 22-04-2016 AMK43_RS03570 9fa3af0822d97f5820e59f431cd5a175 263 SUPERFAMILY SSF56219 1 261 8.77E-34 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK43_RS03570 9fa3af0822d97f5820e59f431cd5a175 263 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 254 5.1E-18 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK43_RS03570 9fa3af0822d97f5820e59f431cd5a175 263 PANTHER PTHR15822:SF7 1 263 1.6E-31 T 22-04-2016 AMK43_RS04790 cf29044719b0613366cd43b6532c3577 254 SUPERFAMILY SSF53850 30 253 9.18E-63 T 22-04-2016 AMK43_RS04790 cf29044719b0613366cd43b6532c3577 254 PANTHER PTHR30632 4 254 7.7E-68 T 22-04-2016 AMK43_RS04790 cf29044719b0613366cd43b6532c3577 254 PANTHER PTHR30632:SF0 4 254 7.7E-68 T 22-04-2016 AMK43_RS04790 cf29044719b0613366cd43b6532c3577 254 Gene3D G3DSA:3.40.190.10 28 112 4.4E-23 T 22-04-2016 AMK43_RS04790 cf29044719b0613366cd43b6532c3577 254 Gene3D G3DSA:3.40.190.10 214 252 4.4E-23 T 22-04-2016 AMK43_RS04790 cf29044719b0613366cd43b6532c3577 254 PIRSF PIRSF004846 1 254 1.8E-80 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 AMK43_RS04790 cf29044719b0613366cd43b6532c3577 254 Pfam PF13531 Bacterial extracellular solute-binding protein 31 252 5.1E-46 T 22-04-2016 AMK43_RS04790 cf29044719b0613366cd43b6532c3577 254 Gene3D G3DSA:3.40.190.10 113 213 3.0E-33 T 22-04-2016 AMK43_RS04790 cf29044719b0613366cd43b6532c3577 254 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 36 249 1.6E-59 T 22-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 AMK43_RS03560 c78e8198a8384a77a0256427fc6352ea 496 SUPERFAMILY SSF51445 4 496 9.89E-184 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS03560 c78e8198a8384a77a0256427fc6352ea 496 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 3 496 1.3E-126 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMK43_RS03560 c78e8198a8384a77a0256427fc6352ea 496 PANTHER PTHR32438:SF5 3 496 6.6E-169 T 22-04-2016 AMK43_RS03560 c78e8198a8384a77a0256427fc6352ea 496 Pfam PF02446 4-alpha-glucanotransferase 11 475 3.1E-172 T 22-04-2016 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 AMK43_RS03560 c78e8198a8384a77a0256427fc6352ea 496 Gene3D G3DSA:3.20.20.80 2 496 1.2E-193 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS03560 c78e8198a8384a77a0256427fc6352ea 496 PANTHER PTHR32438 3 496 6.6E-169 T 22-04-2016 AMK43_RS09735 e1335dc1cadb6b513502ce5d2e003e61 77 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 1 77 6.6E-36 T 22-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 AMK43_RS00855 0e9206cd2ac6b992f6af22ad00365e25 414 Pfam PF13635 Domain of unknown function (DUF4143) 253 357 1.2E-9 T 22-04-2016 IPR025420 Domain of unknown function DUF4143 AMK43_RS00855 0e9206cd2ac6b992f6af22ad00365e25 414 PANTHER PTHR33295:SF8 4 411 4.7E-110 T 22-04-2016 AMK43_RS00855 0e9206cd2ac6b992f6af22ad00365e25 414 PANTHER PTHR33295 4 411 4.7E-110 T 22-04-2016 AMK43_RS00855 0e9206cd2ac6b992f6af22ad00365e25 414 Pfam PF13173 AAA domain 22 151 3.1E-36 T 22-04-2016 AMK43_RS00855 0e9206cd2ac6b992f6af22ad00365e25 414 SUPERFAMILY SSF52540 4 216 9.7E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02630 312967344504b3348ff2e7cc4fcd2a8f 334 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 57 80 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMK43_RS02630 312967344504b3348ff2e7cc4fcd2a8f 334 Gene3D G3DSA:3.40.1190.20 18 326 1.1E-57 T 22-04-2016 IPR029056 Ribokinase-like AMK43_RS02630 312967344504b3348ff2e7cc4fcd2a8f 334 PANTHER PTHR10584:SF159 1 319 1.4E-122 T 22-04-2016 AMK43_RS02630 312967344504b3348ff2e7cc4fcd2a8f 334 Pfam PF00294 pfkB family carbohydrate kinase 18 314 2.6E-47 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB AMK43_RS02630 312967344504b3348ff2e7cc4fcd2a8f 334 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 11 322 2.5E-118 T 22-04-2016 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 AMK43_RS02630 312967344504b3348ff2e7cc4fcd2a8f 334 SUPERFAMILY SSF53613 18 323 5.92E-55 T 22-04-2016 IPR029056 Ribokinase-like AMK43_RS02630 312967344504b3348ff2e7cc4fcd2a8f 334 PANTHER PTHR10584 1 319 1.4E-122 T 22-04-2016 AMK43_RS08125 16fb37aecf6d3f0e5ab1296b0c62f56b 311 SUPERFAMILY SSF51395 1 284 9.77E-54 T 22-04-2016 AMK43_RS08125 16fb37aecf6d3f0e5ab1296b0c62f56b 311 Gene3D G3DSA:3.20.20.70 2 235 3.8E-57 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS08125 16fb37aecf6d3f0e5ab1296b0c62f56b 311 Pfam PF01207 Dihydrouridine synthase (Dus) 5 294 7.5E-53 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK43_RS08125 16fb37aecf6d3f0e5ab1296b0c62f56b 311 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 85 103 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK43_RS08125 16fb37aecf6d3f0e5ab1296b0c62f56b 311 PIRSF PIRSF006621 1 310 5.1E-69 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK43_RS08125 16fb37aecf6d3f0e5ab1296b0c62f56b 311 Gene3D G3DSA:1.10.1200.80 247 284 1.5E-4 T 22-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 AMK43_RS08125 16fb37aecf6d3f0e5ab1296b0c62f56b 311 PANTHER PTHR11082 2 295 6.9E-75 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK43_RS08125 16fb37aecf6d3f0e5ab1296b0c62f56b 311 PANTHER PTHR11082:SF25 2 295 6.9E-75 T 22-04-2016 AMK43_RS10080 3adc1d3d55c78424b342e838ba1da6e8 168 PANTHER PTHR10739 17 168 1.8E-47 T 22-04-2016 AMK43_RS10080 3adc1d3d55c78424b342e838ba1da6e8 168 Gene3D G3DSA:3.40.50.620 30 150 3.2E-37 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS10080 3adc1d3d55c78424b342e838ba1da6e8 168 PANTHER PTHR10739:SF26 17 168 1.8E-47 T 22-04-2016 AMK43_RS10080 3adc1d3d55c78424b342e838ba1da6e8 168 Pfam PF01467 Cytidylyltransferase-like 35 158 2.7E-16 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK43_RS10080 3adc1d3d55c78424b342e838ba1da6e8 168 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 22 161 6.5E-63 T 22-04-2016 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167|UniPathway: UPA00356|UniPathway: UPA00356 AMK43_RS10080 3adc1d3d55c78424b342e838ba1da6e8 168 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 32 96 2.2E-18 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK43_RS10080 3adc1d3d55c78424b342e838ba1da6e8 168 SUPERFAMILY SSF52374 30 161 1.74E-26 T 22-04-2016 AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 SMART SM00268 14 344 0.0022 T 22-04-2016 IPR004000 Actin family AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 Gene3D G3DSA:3.90.640.10 189 257 7.4E-22 T 22-04-2016 AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 SUPERFAMILY SSF53067 152 330 1.77E-32 T 22-04-2016 AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 PANTHER PTHR19375:SF117 14 328 8.3E-112 T 22-04-2016 AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 SUPERFAMILY SSF53067 15 150 5.96E-35 T 22-04-2016 AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 Gene3D G3DSA:3.30.420.40 263 316 4.1E-24 T 22-04-2016 AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 Gene3D G3DSA:3.30.420.40 162 188 4.1E-24 T 22-04-2016 AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 189 209 3.1E-38 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 3.1E-38 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 3.1E-38 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 134 153 3.1E-38 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 300 326 3.1E-38 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 Pfam PF06723 MreB/Mbl protein 15 336 1.3E-113 T 22-04-2016 IPR004753 Cell shape determining protein MreB/Mrl GO:0000902 AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 PANTHER PTHR19375 14 328 8.3E-112 T 22-04-2016 AMK43_RS00550 a819efdde79be4fc4279edb140d78950 346 Gene3D G3DSA:3.30.420.40 15 161 2.5E-41 T 22-04-2016 AMK43_RS06145 6b849b59070c000ba5b1e640e3a09af6 332 PANTHER PTHR11075:SF6 3 328 1.1E-144 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMK43_RS06145 6b849b59070c000ba5b1e640e3a09af6 332 Pfam PF03462 PCRF domain 3 185 1.7E-55 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AMK43_RS06145 6b849b59070c000ba5b1e640e3a09af6 332 SMART SM00937 51 160 3.8E-42 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AMK43_RS06145 6b849b59070c000ba5b1e640e3a09af6 332 Gene3D G3DSA:1.20.58.410 3 80 6.5E-8 T 22-04-2016 AMK43_RS06145 6b849b59070c000ba5b1e640e3a09af6 332 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 3 329 4.0E-144 T 22-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 AMK43_RS06145 6b849b59070c000ba5b1e640e3a09af6 332 SUPERFAMILY SSF75620 3 329 2.35E-125 T 22-04-2016 AMK43_RS06145 6b849b59070c000ba5b1e640e3a09af6 332 Gene3D G3DSA:3.30.160.20 192 272 3.0E-37 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain AMK43_RS06145 6b849b59070c000ba5b1e640e3a09af6 332 Pfam PF00472 RF-1 domain 194 303 1.4E-41 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMK43_RS06145 6b849b59070c000ba5b1e640e3a09af6 332 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 210 226 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMK43_RS06145 6b849b59070c000ba5b1e640e3a09af6 332 PANTHER PTHR11075 3 328 1.1E-144 T 22-04-2016 AMK43_RS03590 bd6584114f8dc2a1806363beb1a6c77a 582 Gene3D G3DSA:3.90.400.10 110 185 8.8E-30 T 22-04-2016 AMK43_RS03590 bd6584114f8dc2a1806363beb1a6c77a 582 Pfam PF16657 Maltogenic Amylase, C-terminal domain 497 540 2.0E-9 T 22-04-2016 IPR032091 Maltogenic Amylase, C-terminal AMK43_RS03590 bd6584114f8dc2a1806363beb1a6c77a 582 PANTHER PTHR10357 469 581 3.8E-172 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK43_RS03590 bd6584114f8dc2a1806363beb1a6c77a 582 PANTHER PTHR10357 4 434 3.8E-172 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK43_RS03590 bd6584114f8dc2a1806363beb1a6c77a 582 SUPERFAMILY SSF51011 496 577 4.38E-12 T 22-04-2016 AMK43_RS03590 bd6584114f8dc2a1806363beb1a6c77a 582 Pfam PF00128 Alpha amylase, catalytic domain 33 386 2.0E-102 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK43_RS03590 bd6584114f8dc2a1806363beb1a6c77a 582 SUPERFAMILY SSF51445 9 486 4.29E-138 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS03590 bd6584114f8dc2a1806363beb1a6c77a 582 PANTHER PTHR10357:SF142 469 581 3.8E-172 T 22-04-2016 AMK43_RS03590 bd6584114f8dc2a1806363beb1a6c77a 582 PANTHER PTHR10357:SF142 4 434 3.8E-172 T 22-04-2016 AMK43_RS03590 bd6584114f8dc2a1806363beb1a6c77a 582 Gene3D G3DSA:2.60.40.1180 498 578 1.1E-14 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta AMK43_RS03590 bd6584114f8dc2a1806363beb1a6c77a 582 Gene3D G3DSA:3.20.20.80 186 486 5.6E-112 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS03590 bd6584114f8dc2a1806363beb1a6c77a 582 Gene3D G3DSA:3.20.20.80 8 109 5.6E-112 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS03590 bd6584114f8dc2a1806363beb1a6c77a 582 SMART SM00642 18 429 7.2E-134 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK43_RS02010 0d69b7c3dc5c283803545c77cd8a119e 355 Pfam PF01263 Aldose 1-epimerase 19 351 1.4E-74 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AMK43_RS02010 0d69b7c3dc5c283803545c77cd8a119e 355 PANTHER PTHR10091 13 355 7.2E-118 T 22-04-2016 AMK43_RS02010 0d69b7c3dc5c283803545c77cd8a119e 355 PANTHER PTHR10091:SF0 13 355 7.2E-118 T 22-04-2016 AMK43_RS02010 0d69b7c3dc5c283803545c77cd8a119e 355 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 172 181 - T 22-04-2016 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 AMK43_RS02010 0d69b7c3dc5c283803545c77cd8a119e 355 SUPERFAMILY SSF74650 7 352 8.16E-98 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AMK43_RS02010 0d69b7c3dc5c283803545c77cd8a119e 355 Gene3D G3DSA:2.70.98.10 10 354 1.2E-105 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 AMK43_RS02010 0d69b7c3dc5c283803545c77cd8a119e 355 PIRSF PIRSF005096 1 355 1.4E-110 T 22-04-2016 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317|UniPathway: UPA00242 AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 PRINTS PR00625 DnaJ domain signature 47 67 3.2E-32 T 22-04-2016 IPR001623 DnaJ domain AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 PRINTS PR00625 DnaJ domain signature 7 25 3.2E-32 T 22-04-2016 IPR001623 DnaJ domain AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 PRINTS PR00625 DnaJ domain signature 25 40 3.2E-32 T 22-04-2016 IPR001623 DnaJ domain AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 PRINTS PR00625 DnaJ domain signature 67 86 3.2E-32 T 22-04-2016 IPR001623 DnaJ domain AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 Gene3D G3DSA:2.60.260.20 276 352 3.7E-19 T 22-04-2016 AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 SUPERFAMILY SSF46565 1 105 6.67E-35 T 22-04-2016 IPR001623 DnaJ domain AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 Pfam PF00226 DnaJ domain 5 72 3.2E-26 T 22-04-2016 IPR001623 DnaJ domain AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 Pfam PF01556 DnaJ C terminal domain 137 351 1.3E-39 T 22-04-2016 IPR002939 Chaperone DnaJ, C-terminal AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 Pfam PF00684 DnaJ central domain 163 227 2.1E-13 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 ProSitePatterns PS00636 Nt-dnaJ domain signature. 52 71 - T 22-04-2016 IPR018253 DnaJ domain, conserved site AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 SMART SM00271 4 67 1.7E-34 T 22-04-2016 IPR001623 DnaJ domain AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 SUPERFAMILY SSF49493 279 362 3.66E-21 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 PANTHER PTHR24078:SF190 1 365 2.5E-137 T 22-04-2016 AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 367 2.4E-132 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 387 39.665 T 22-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 Gene3D G3DSA:1.10.287.110 1 118 1.3E-37 T 22-04-2016 IPR001623 DnaJ domain AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 PANTHER PTHR24078 1 365 2.5E-137 T 22-04-2016 AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 Gene3D G3DSA:2.60.260.20 231 274 7.9E-15 T 22-04-2016 AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 Gene3D G3DSA:2.60.260.20 119 156 7.9E-15 T 22-04-2016 AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 SUPERFAMILY SSF49493 233 277 2.75E-16 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 SUPERFAMILY SSF49493 135 168 2.75E-16 T 22-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 SUPERFAMILY SSF57938 150 230 1.96E-18 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMK43_RS08485 58a38cde61c920860619d08e7cb31c32 393 Gene3D G3DSA:2.10.230.10 157 230 5.2E-20 T 22-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 AMK43_RS06470 28b753f8dc0123b03ab800c732a36a41 378 SUPERFAMILY SSF111369 45 218 2.35E-12 T 22-04-2016 AMK43_RS06470 28b753f8dc0123b03ab800c732a36a41 378 Pfam PF13437 HlyD family secretion protein 160 264 4.8E-16 T 22-04-2016 AMK43_RS06470 28b753f8dc0123b03ab800c732a36a41 378 PANTHER PTHR32347 11 350 5.7E-42 T 22-04-2016 AMK43_RS06470 28b753f8dc0123b03ab800c732a36a41 378 Gene3D G3DSA:2.40.50.100 159 189 3.0E-10 T 22-04-2016 AMK43_RS06470 28b753f8dc0123b03ab800c732a36a41 378 Gene3D G3DSA:2.40.50.100 59 91 3.0E-10 T 22-04-2016 AMK43_RS06470 28b753f8dc0123b03ab800c732a36a41 378 PANTHER PTHR32347:SF14 11 350 5.7E-42 T 22-04-2016 AMK43_RS06470 28b753f8dc0123b03ab800c732a36a41 378 Gene3D G3DSA:1.20.1600.10 100 158 5.6E-5 T 22-04-2016 AMK43_RS06470 28b753f8dc0123b03ab800c732a36a41 378 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 348 3.0E-52 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMK43_RS05815 3b5efdecd20fb22c83dd5c197f4e8030 577 PANTHER PTHR24221 1 576 2.0E-187 T 22-04-2016 AMK43_RS05815 3b5efdecd20fb22c83dd5c197f4e8030 577 Gene3D G3DSA:3.40.50.300 331 562 2.8E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05815 3b5efdecd20fb22c83dd5c197f4e8030 577 SUPERFAMILY SSF52540 323 569 4.28E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05815 3b5efdecd20fb22c83dd5c197f4e8030 577 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS05815 3b5efdecd20fb22c83dd5c197f4e8030 577 SMART SM00382 359 545 4.7E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS05815 3b5efdecd20fb22c83dd5c197f4e8030 577 SUPERFAMILY SSF90123 3 315 4.45E-68 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS05815 3b5efdecd20fb22c83dd5c197f4e8030 577 PANTHER PTHR24221:SF240 1 576 2.0E-187 T 22-04-2016 AMK43_RS05815 3b5efdecd20fb22c83dd5c197f4e8030 577 Pfam PF00664 ABC transporter transmembrane region 18 285 5.0E-40 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS05815 3b5efdecd20fb22c83dd5c197f4e8030 577 Pfam PF00005 ABC transporter 350 499 8.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS05815 3b5efdecd20fb22c83dd5c197f4e8030 577 Gene3D G3DSA:1.20.1560.10 3 315 8.7E-61 T 22-04-2016 AMK43_RS04300 5c80140c047f9b10f00bf96c223ce120 183 Gene3D G3DSA:3.40.1360.20 1 117 2.3E-33 T 22-04-2016 AMK43_RS04300 5c80140c047f9b10f00bf96c223ce120 183 SUPERFAMILY SSF110455 1 112 1.8E-29 T 22-04-2016 AMK43_RS04300 5c80140c047f9b10f00bf96c223ce120 183 Pfam PF13662 Toprim domain 4 66 8.1E-6 T 22-04-2016 IPR006171 Toprim domain AMK43_RS04300 5c80140c047f9b10f00bf96c223ce120 183 Pfam PF13331 Domain of unknown function (DUF4093) 91 176 9.0E-28 T 22-04-2016 IPR025156 Ribonuclease M5, C-terminal domain AMK43_RS04300 5c80140c047f9b10f00bf96c223ce120 183 SMART SM00493 4 78 0.0064 T 22-04-2016 IPR006171 Toprim domain AMK43_RS04300 5c80140c047f9b10f00bf96c223ce120 183 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 177 2.2E-43 T 22-04-2016 IPR004466 Ribonuclease M5 GO:0043822 AMK43_RS04300 5c80140c047f9b10f00bf96c223ce120 183 Hamap MF_01469 Ribonuclease M5 [rnmV]. 3 181 29.201 T 22-04-2016 IPR004466 Ribonuclease M5 GO:0043822 AMK43_RS04300 5c80140c047f9b10f00bf96c223ce120 183 PANTHER PTHR39156 1 182 1.5E-54 T 22-04-2016 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 175.223 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 Gene3D G3DSA:3.30.420.40 206 396 2.5E-77 T 22-04-2016 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 Gene3D G3DSA:3.30.420.40 1 205 1.2E-9 T 22-04-2016 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 Pfam PF00871 Acetokinase family 2 391 2.1E-148 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 PANTHER PTHR21060:SF11 1 398 1.1E-206 T 22-04-2016 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 204 221 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 PIRSF PIRSF000722 1 398 1.3E-148 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 PRINTS PR00471 Acetate kinase family signature 3 14 4.1E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 PRINTS PR00471 Acetate kinase family signature 204 225 4.1E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 PRINTS PR00471 Acetate kinase family signature 378 390 4.1E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 PRINTS PR00471 Acetate kinase family signature 323 339 4.1E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 PRINTS PR00471 Acetate kinase family signature 301 314 4.1E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 PRINTS PR00471 Acetate kinase family signature 176 189 4.1E-45 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 3 14 - T 22-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 TIGRFAM TIGR00016 ackA: acetate kinase 1 398 2.3E-156 T 22-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 PANTHER PTHR21060 1 398 1.1E-206 T 22-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 SUPERFAMILY SSF53067 1 199 8.42E-64 T 22-04-2016 AMK43_RS10055 421fbee414d57d59714c21884bc19a85 398 SUPERFAMILY SSF53067 160 397 5.88E-87 T 22-04-2016 AMK43_RS09850 be229d24ac4a2e278b3c6d323a9e6622 228 Gene3D G3DSA:3.40.50.2300 1 120 1.6E-41 T 22-04-2016 AMK43_RS09850 be229d24ac4a2e278b3c6d323a9e6622 228 SUPERFAMILY SSF46894 124 224 2.75E-30 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK43_RS09850 be229d24ac4a2e278b3c6d323a9e6622 228 Pfam PF00072 Response regulator receiver domain 3 113 8.2E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS09850 be229d24ac4a2e278b3c6d323a9e6622 228 SMART SM00862 148 223 2.0E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK43_RS09850 be229d24ac4a2e278b3c6d323a9e6622 228 SMART SM00448 1 112 1.1E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS09850 be229d24ac4a2e278b3c6d323a9e6622 228 PANTHER PTHR26402 1 224 1.2E-96 T 22-04-2016 AMK43_RS09850 be229d24ac4a2e278b3c6d323a9e6622 228 PANTHER PTHR26402:SF316 1 224 1.2E-96 T 22-04-2016 AMK43_RS09850 be229d24ac4a2e278b3c6d323a9e6622 228 Gene3D G3DSA:1.10.10.10 126 224 8.8E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09850 be229d24ac4a2e278b3c6d323a9e6622 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 223 5.8E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK43_RS09850 be229d24ac4a2e278b3c6d323a9e6622 228 SUPERFAMILY SSF52172 1 118 1.1E-40 T 22-04-2016 IPR011006 CheY-like superfamily AMK43_RS03030 1a1c6849252ff24830422971efb4902d 450 SUPERFAMILY SSF101821 106 232 4.3E-36 T 22-04-2016 AMK43_RS03030 1a1c6849252ff24830422971efb4902d 450 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 282 300 1.1E-42 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AMK43_RS03030 1a1c6849252ff24830422971efb4902d 450 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 164 181 1.1E-42 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AMK43_RS03030 1a1c6849252ff24830422971efb4902d 450 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 325 341 1.1E-42 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AMK43_RS03030 1a1c6849252ff24830422971efb4902d 450 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 94 110 1.1E-42 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AMK43_RS03030 1a1c6849252ff24830422971efb4902d 450 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 414 429 1.1E-42 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AMK43_RS03030 1a1c6849252ff24830422971efb4902d 450 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 127 147 1.1E-42 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AMK43_RS03030 1a1c6849252ff24830422971efb4902d 450 Gene3D G3DSA:2.30.250.10 105 239 5.1E-43 T 22-04-2016 IPR023358 Peptidase M18, domain 2 GO:0004177 AMK43_RS03030 1a1c6849252ff24830422971efb4902d 450 SUPERFAMILY SSF53187 12 105 1.26E-92 T 22-04-2016 AMK43_RS03030 1a1c6849252ff24830422971efb4902d 450 SUPERFAMILY SSF53187 232 448 1.26E-92 T 22-04-2016 AMK43_RS03030 1a1c6849252ff24830422971efb4902d 450 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 30 447 8.8E-126 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AMK43_RS03030 1a1c6849252ff24830422971efb4902d 450 PANTHER PTHR28570 19 447 1.5E-161 T 22-04-2016 AMK43_RS03030 1a1c6849252ff24830422971efb4902d 450 Gene3D G3DSA:3.40.630.10 21 104 8.1E-102 T 22-04-2016 AMK43_RS03030 1a1c6849252ff24830422971efb4902d 450 Gene3D G3DSA:3.40.630.10 241 448 8.1E-102 T 22-04-2016 AMK43_RS08910 283e26a36030aee21a6c429d87ce6304 237 SUPERFAMILY SSF53633 2 235 3.67E-73 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS08910 283e26a36030aee21a6c429d87ce6304 237 Gene3D G3DSA:3.40.1160.10 3 234 6.3E-86 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS08910 283e26a36030aee21a6c429d87ce6304 237 PANTHER PTHR21499:SF23 3 234 3.9E-112 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMK43_RS08910 283e26a36030aee21a6c429d87ce6304 237 PANTHER PTHR21499 3 234 3.9E-112 T 22-04-2016 AMK43_RS08910 283e26a36030aee21a6c429d87ce6304 237 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 4 234 5.0E-99 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMK43_RS08910 283e26a36030aee21a6c429d87ce6304 237 PIRSF PIRSF005650 1 237 2.6E-92 T 22-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMK43_RS08910 283e26a36030aee21a6c429d87ce6304 237 Pfam PF00696 Amino acid kinase family 5 214 7.2E-28 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS08910 283e26a36030aee21a6c429d87ce6304 237 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 235 44.314 T 22-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 AMK43_RS10035 77cadc54dfdf4b82df8d943912335b37 260 Pfam PF12833 Helix-turn-helix domain 176 254 1.5E-19 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS10035 77cadc54dfdf4b82df8d943912335b37 260 SUPERFAMILY SSF52172 1 121 3.7E-29 T 22-04-2016 IPR011006 CheY-like superfamily AMK43_RS10035 77cadc54dfdf4b82df8d943912335b37 260 SUPERFAMILY SSF46689 206 256 1.08E-11 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS10035 77cadc54dfdf4b82df8d943912335b37 260 Pfam PF00072 Response regulator receiver domain 4 116 2.4E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS10035 77cadc54dfdf4b82df8d943912335b37 260 Gene3D G3DSA:1.10.10.60 207 255 2.4E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS10035 77cadc54dfdf4b82df8d943912335b37 260 SMART SM00342 170 253 9.2E-25 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS10035 77cadc54dfdf4b82df8d943912335b37 260 PANTHER PTHR26402 2 120 3.4E-32 T 22-04-2016 AMK43_RS10035 77cadc54dfdf4b82df8d943912335b37 260 Gene3D G3DSA:3.40.50.2300 1 128 2.8E-32 T 22-04-2016 AMK43_RS10035 77cadc54dfdf4b82df8d943912335b37 260 Gene3D G3DSA:1.10.10.60 158 206 7.1E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS10035 77cadc54dfdf4b82df8d943912335b37 260 SMART SM00448 2 116 4.0E-26 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS04625 a145415056e62aafee6d7bf8a3bd2365 1166 Pfam PF13087 AAA domain 815 1010 4.3E-9 T 22-04-2016 AMK43_RS04625 a145415056e62aafee6d7bf8a3bd2365 1166 PANTHER PTHR10887:SF340 803 1010 3.4E-40 T 22-04-2016 AMK43_RS04625 a145415056e62aafee6d7bf8a3bd2365 1166 PANTHER PTHR10887:SF340 62 344 3.4E-40 T 22-04-2016 AMK43_RS04625 a145415056e62aafee6d7bf8a3bd2365 1166 PANTHER PTHR10887:SF340 608 787 3.4E-40 T 22-04-2016 AMK43_RS04625 a145415056e62aafee6d7bf8a3bd2365 1166 Pfam PF13086 AAA domain 278 786 2.0E-11 T 22-04-2016 AMK43_RS04625 a145415056e62aafee6d7bf8a3bd2365 1166 SUPERFAMILY SSF52540 734 785 6.91E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04625 a145415056e62aafee6d7bf8a3bd2365 1166 SUPERFAMILY SSF52540 828 1010 6.91E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04625 a145415056e62aafee6d7bf8a3bd2365 1166 SUPERFAMILY SSF52540 270 342 6.91E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04625 a145415056e62aafee6d7bf8a3bd2365 1166 Gene3D G3DSA:3.40.50.300 748 862 1.2E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04625 a145415056e62aafee6d7bf8a3bd2365 1166 Gene3D G3DSA:3.40.50.300 261 385 1.2E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04625 a145415056e62aafee6d7bf8a3bd2365 1166 Pfam PF13195 Protein of unknown function (DUF4011) 53 155 6.2E-7 T 22-04-2016 IPR025103 Protein of unknown function DUF4011 AMK43_RS04625 a145415056e62aafee6d7bf8a3bd2365 1166 PANTHER PTHR10887 803 1010 3.4E-40 T 22-04-2016 AMK43_RS04625 a145415056e62aafee6d7bf8a3bd2365 1166 PANTHER PTHR10887 62 344 3.4E-40 T 22-04-2016 AMK43_RS04625 a145415056e62aafee6d7bf8a3bd2365 1166 PANTHER PTHR10887 608 787 3.4E-40 T 22-04-2016 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 SUPERFAMILY SSF50677 259 443 6.41E-52 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 224 432 1.5E-66 T 22-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 893 22.853 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 Gene3D G3DSA:3.40.50.620 638 665 2.3E-133 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 Gene3D G3DSA:3.40.50.620 517 602 2.3E-133 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 Gene3D G3DSA:3.40.50.620 5 231 2.3E-133 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 894 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 Gene3D G3DSA:3.90.740.10 236 488 8.3E-65 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 SUPERFAMILY SSF52374 444 687 1.13E-144 T 22-04-2016 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 SUPERFAMILY SSF52374 5 229 1.13E-144 T 22-04-2016 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 Pfam PF08264 Anticodon-binding domain of tRNA 725 848 3.4E-25 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 54 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PRINTS PR00985 Leucyl-tRNA synthetase signature 218 237 1.3E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PRINTS PR00985 Leucyl-tRNA synthetase signature 553 575 1.3E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PRINTS PR00985 Leucyl-tRNA synthetase signature 586 596 1.3E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PRINTS PR00985 Leucyl-tRNA synthetase signature 154 170 1.3E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PRINTS PR00985 Leucyl-tRNA synthetase signature 187 200 1.3E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PRINTS PR00985 Leucyl-tRNA synthetase signature 514 532 1.3E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PRINTS PR00985 Leucyl-tRNA synthetase signature 128 145 1.3E-51 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PANTHER PTHR11946 1 208 0.0 T 22-04-2016 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PANTHER PTHR11946 635 893 0.0 T 22-04-2016 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PANTHER PTHR11946 261 286 0.0 T 22-04-2016 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PANTHER PTHR11946 308 600 0.0 T 22-04-2016 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 446 599 4.5E-12 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 638 678 2.0E-5 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 13 173 1.1E-28 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 Gene3D G3DSA:1.10.730.10 666 828 6.4E-41 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PANTHER PTHR11946:SF7 1 208 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PANTHER PTHR11946:SF7 635 893 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PANTHER PTHR11946:SF7 261 286 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 PANTHER PTHR11946:SF7 308 600 0.0 T 22-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 AMK43_RS03400 6283a5867a91f4b3c12afd5d70e6966e 895 SUPERFAMILY SSF47323 680 894 1.8E-35 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS01055 896be3aeed1cbf4bac6c97b82e3efadb 419 Gene3D G3DSA:3.20.20.70 17 298 1.2E-51 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS01055 896be3aeed1cbf4bac6c97b82e3efadb 419 SUPERFAMILY SSF51569 16 410 7.69E-90 T 22-04-2016 AMK43_RS01055 896be3aeed1cbf4bac6c97b82e3efadb 419 Pfam PF08013 Tagatose 6 phosphate kinase 17 387 3.5E-15 T 22-04-2016 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 UniPathway: UPA00704 AMK43_RS02695 930e3c75c972db5ba7bb9efe2ad5c4f8 89 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 77 22.051 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02695 930e3c75c972db5ba7bb9efe2ad5c4f8 89 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 22-04-2016 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02695 930e3c75c972db5ba7bb9efe2ad5c4f8 89 Gene3D G3DSA:3.30.1320.10 1 84 1.0E-28 T 22-04-2016 IPR023803 Ribosomal protein S16 domain AMK43_RS02695 930e3c75c972db5ba7bb9efe2ad5c4f8 89 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 80 3.0E-29 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02695 930e3c75c972db5ba7bb9efe2ad5c4f8 89 PANTHER PTHR12919 1 86 5.9E-34 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02695 930e3c75c972db5ba7bb9efe2ad5c4f8 89 SUPERFAMILY SSF54565 1 84 5.76E-28 T 22-04-2016 IPR023803 Ribosomal protein S16 domain AMK43_RS02695 930e3c75c972db5ba7bb9efe2ad5c4f8 89 Pfam PF00886 Ribosomal protein S16 8 67 3.8E-18 T 22-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS09880 02770abff3a08fc2c2c25bdeb61eb8c7 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 104 118 1.4E-16 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMK43_RS09880 02770abff3a08fc2c2c25bdeb61eb8c7 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 119 132 1.4E-16 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMK43_RS09880 02770abff3a08fc2c2c25bdeb61eb8c7 158 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 87 100 1.4E-16 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMK43_RS09880 02770abff3a08fc2c2c25bdeb61eb8c7 158 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 114 131 - T 22-04-2016 IPR001882 Biotin-binding site AMK43_RS09880 02770abff3a08fc2c2c25bdeb61eb8c7 158 Pfam PF00364 Biotin-requiring enzyme 84 157 1.4E-23 T 22-04-2016 IPR000089 Biotin/lipoyl attachment AMK43_RS09880 02770abff3a08fc2c2c25bdeb61eb8c7 158 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 5 157 5.1E-41 T 22-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 AMK43_RS09880 02770abff3a08fc2c2c25bdeb61eb8c7 158 PANTHER PTHR23151:SF64 5 157 7.1E-27 T 22-04-2016 AMK43_RS09880 02770abff3a08fc2c2c25bdeb61eb8c7 158 Gene3D G3DSA:2.40.50.100 82 157 3.7E-29 T 22-04-2016 AMK43_RS09880 02770abff3a08fc2c2c25bdeb61eb8c7 158 PANTHER PTHR23151 5 157 7.1E-27 T 22-04-2016 AMK43_RS09880 02770abff3a08fc2c2c25bdeb61eb8c7 158 SUPERFAMILY SSF51230 83 157 3.27E-23 T 22-04-2016 IPR011053 Single hybrid motif AMK43_RS02245 380e5e5279b2c245182bd6638fbc86b2 166 SUPERFAMILY SSF46767 78 159 8.5E-30 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK43_RS02245 380e5e5279b2c245182bd6638fbc86b2 166 PANTHER PTHR10815:SF5 13 159 2.4E-52 T 22-04-2016 AMK43_RS02245 380e5e5279b2c245182bd6638fbc86b2 166 SUPERFAMILY SSF53155 14 82 6.28E-10 T 22-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 AMK43_RS02245 380e5e5279b2c245182bd6638fbc86b2 166 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 159 3.0E-28 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK43_RS02245 380e5e5279b2c245182bd6638fbc86b2 166 Gene3D G3DSA:1.10.10.10 78 162 3.2E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02245 380e5e5279b2c245182bd6638fbc86b2 166 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 2 161 35.085 T 22-04-2016 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 AMK43_RS02245 380e5e5279b2c245182bd6638fbc86b2 166 PANTHER PTHR10815 13 159 2.4E-52 T 22-04-2016 AMK43_RS02245 380e5e5279b2c245182bd6638fbc86b2 166 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 129 135 - T 22-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 AMK43_RS02245 380e5e5279b2c245182bd6638fbc86b2 166 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 79 158 2.1E-33 T 22-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 AMK43_RS04370 de858fe09bf8d513c395ca9cb4e93a1c 249 SMART SM00563 78 192 3.0E-38 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK43_RS04370 de858fe09bf8d513c395ca9cb4e93a1c 249 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 72 189 2.5E-34 T 22-04-2016 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|Reactome: REACT_22258|UniPathway: UPA00557 AMK43_RS04370 de858fe09bf8d513c395ca9cb4e93a1c 249 Gene3D G3DSA:3.40.1130.10 40 229 1.2E-33 T 22-04-2016 AMK43_RS04370 de858fe09bf8d513c395ca9cb4e93a1c 249 Pfam PF01553 Acyltransferase 66 189 1.9E-29 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK43_RS04370 de858fe09bf8d513c395ca9cb4e93a1c 249 PANTHER PTHR10434 1 246 2.3E-53 T 22-04-2016 AMK43_RS04370 de858fe09bf8d513c395ca9cb4e93a1c 249 SUPERFAMILY SSF69593 56 239 1.83E-43 T 22-04-2016 AMK43_RS00540 43fb8b74d22f509904ed01b2f64bdfca 280 Gene3D G3DSA:1.10.3720.10 80 275 7.7E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00540 43fb8b74d22f509904ed01b2f64bdfca 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 264 1.6E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00540 43fb8b74d22f509904ed01b2f64bdfca 280 PANTHER PTHR30043 1 275 6.0E-57 T 22-04-2016 AMK43_RS00540 43fb8b74d22f509904ed01b2f64bdfca 280 SUPERFAMILY SSF161098 81 263 2.62E-29 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00540 43fb8b74d22f509904ed01b2f64bdfca 280 PANTHER PTHR30043:SF2 1 275 6.0E-57 T 22-04-2016 AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 PANTHER PTHR22942 11 351 8.4E-187 T 22-04-2016 AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 ProSitePatterns PS00321 recA signature. 229 237 - T 22-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 Gene3D G3DSA:3.40.50.300 40 283 4.4E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 PANTHER PTHR22942:SF1 11 351 8.4E-187 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 17 338 2.5E-162 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 Gene3D G3DSA:3.30.250.10 284 341 1.8E-21 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 SMART SM00382 70 244 1.1E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 SUPERFAMILY SSF54752 284 340 2.49E-17 T 22-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 SUPERFAMILY SSF52540 18 283 7.25E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 Pfam PF00154 recA bacterial DNA recombination protein 20 284 2.7E-133 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 Hamap MF_00268 Protein RecA [recA]. 18 345 49.769 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 PRINTS PR00142 RecA protein signature 259 288 4.5E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 PRINTS PR00142 RecA protein signature 178 207 4.5E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 PRINTS PR00142 RecA protein signature 226 254 4.5E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 PRINTS PR00142 RecA protein signature 313 330 4.5E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 PRINTS PR00142 RecA protein signature 106 135 4.5E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK43_RS04360 b1cb8fcd09744374e2fe780d6eda9965 393 PRINTS PR00142 RecA protein signature 140 169 4.5E-82 T 22-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 AMK43_RS04255 d3ea7af525e3cf6f70c149b59dc477f1 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 10 151 2.2E-36 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS04255 d3ea7af525e3cf6f70c149b59dc477f1 155 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 56 72 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS04255 d3ea7af525e3cf6f70c149b59dc477f1 155 PANTHER PTHR30505:SF5 6 155 1.8E-43 T 22-04-2016 AMK43_RS04255 d3ea7af525e3cf6f70c149b59dc477f1 155 PANTHER PTHR30505 6 155 1.8E-43 T 22-04-2016 AMK43_RS04255 d3ea7af525e3cf6f70c149b59dc477f1 155 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 11 137 1.3E-33 T 22-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS04255 d3ea7af525e3cf6f70c149b59dc477f1 155 SUPERFAMILY SSF55804 6 151 2.09E-37 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 AMK43_RS04255 d3ea7af525e3cf6f70c149b59dc477f1 155 Gene3D G3DSA:3.40.930.10 6 154 1.1E-44 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS03555 3e1d2c55aef6c0a6fe01948501a038d0 235 Gene3D G3DSA:1.10.10.10 2 61 3.1E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03555 3e1d2c55aef6c0a6fe01948501a038d0 235 SMART SM00866 89 228 7.1E-25 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMK43_RS03555 3e1d2c55aef6c0a6fe01948501a038d0 235 PANTHER PTHR11751:SF347 118 140 8.2E-24 T 22-04-2016 AMK43_RS03555 3e1d2c55aef6c0a6fe01948501a038d0 235 PANTHER PTHR11751:SF347 1 69 8.2E-24 T 22-04-2016 AMK43_RS03555 3e1d2c55aef6c0a6fe01948501a038d0 235 SUPERFAMILY SSF64288 75 233 5.02E-37 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AMK43_RS03555 3e1d2c55aef6c0a6fe01948501a038d0 235 Pfam PF07702 UTRA domain 90 227 9.9E-27 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMK43_RS03555 3e1d2c55aef6c0a6fe01948501a038d0 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 62 1.3E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK43_RS03555 3e1d2c55aef6c0a6fe01948501a038d0 235 PANTHER PTHR11751 118 140 8.2E-24 T 22-04-2016 AMK43_RS03555 3e1d2c55aef6c0a6fe01948501a038d0 235 PANTHER PTHR11751 1 69 8.2E-24 T 22-04-2016 AMK43_RS03555 3e1d2c55aef6c0a6fe01948501a038d0 235 SUPERFAMILY SSF46785 1 70 6.62E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03555 3e1d2c55aef6c0a6fe01948501a038d0 235 Gene3D G3DSA:3.40.1410.10 62 235 4.9E-43 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AMK43_RS03555 3e1d2c55aef6c0a6fe01948501a038d0 235 SMART SM00345 7 66 2.4E-10 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK43_RS03555 3e1d2c55aef6c0a6fe01948501a038d0 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 7.1E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK43_RS03555 3e1d2c55aef6c0a6fe01948501a038d0 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 7.1E-6 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK43_RS03300 ed7824e2c93948515d0af1d1185ac798 552 Gene3D G3DSA:3.40.50.300 1 207 1.2E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03300 ed7824e2c93948515d0af1d1185ac798 552 Gene3D G3DSA:3.40.50.300 297 525 1.9E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03300 ed7824e2c93948515d0af1d1185ac798 552 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 1.4E-146 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMK43_RS03300 ed7824e2c93948515d0af1d1185ac798 552 PIRSF PIRSF003128 1 552 6.0E-167 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMK43_RS03300 ed7824e2c93948515d0af1d1185ac798 552 SUPERFAMILY SSF52540 1 200 1.25E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03300 ed7824e2c93948515d0af1d1185ac798 552 SUPERFAMILY SSF52540 315 515 1.25E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03300 ed7824e2c93948515d0af1d1185ac798 552 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 506 8.6E-13 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal AMK43_RS03300 ed7824e2c93948515d0af1d1185ac798 552 PANTHER PTHR11059 2 552 8.1E-140 T 22-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 AMK43_RS02700 d6021f15cfe878bf22f6a4fd1c38cdf6 321 PANTHER PTHR11516 2 321 4.5E-150 T 22-04-2016 AMK43_RS02700 d6021f15cfe878bf22f6a4fd1c38cdf6 321 SUPERFAMILY SSF52518 2 321 5.72E-103 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS02700 d6021f15cfe878bf22f6a4fd1c38cdf6 321 Pfam PF00676 Dehydrogenase E1 component 14 311 2.4E-88 T 22-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 AMK43_RS02700 d6021f15cfe878bf22f6a4fd1c38cdf6 321 Gene3D G3DSA:3.40.50.970 2 321 2.5E-131 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 PANTHER PTHR13370:SF7 161 322 2.2E-16 T 22-04-2016 AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 PANTHER PTHR13370:SF7 83 123 2.2E-16 T 22-04-2016 AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 PANTHER PTHR13370:SF7 375 496 2.2E-16 T 22-04-2016 AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 396 418 1.4E-17 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 114 126 1.4E-17 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 177 196 1.4E-17 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 419 433 1.4E-17 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 SUPERFAMILY SSF53335 165 302 7.6E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 SUPERFAMILY SSF53335 83 133 7.6E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 SUPERFAMILY SSF53335 368 474 7.6E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 Gene3D G3DSA:3.40.50.150 90 276 3.7E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 Gene3D G3DSA:3.40.50.150 328 481 3.7E-63 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 PIRSF PIRSF015855 1 641 1.3E-148 T 22-04-2016 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 PANTHER PTHR13370 161 322 2.2E-16 T 22-04-2016 AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 PANTHER PTHR13370 83 123 2.2E-16 T 22-04-2016 AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 PANTHER PTHR13370 375 496 2.2E-16 T 22-04-2016 AMK43_RS06890 8990052a4db6ae25d14d6c0d126cbab6 653 Pfam PF01555 DNA methylase 114 447 1.9E-45 T 22-04-2016 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 AMK43_RS05420 890d93d379e08fd85dda4755a5e30609 325 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 323 72.968 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK43_RS05420 890d93d379e08fd85dda4755a5e30609 325 Gene3D G3DSA:3.40.47.10 1 159 7.3E-68 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS05420 890d93d379e08fd85dda4755a5e30609 325 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 105 182 4.8E-31 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK43_RS05420 890d93d379e08fd85dda4755a5e30609 325 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 234 323 1.5E-36 T 22-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK43_RS05420 890d93d379e08fd85dda4755a5e30609 325 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 323 7.2E-131 T 22-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK43_RS05420 890d93d379e08fd85dda4755a5e30609 325 Gene3D G3DSA:3.40.47.10 160 325 3.4E-58 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS05420 890d93d379e08fd85dda4755a5e30609 325 PANTHER PTHR34069:SF2 1 325 1.5E-135 T 22-04-2016 AMK43_RS05420 890d93d379e08fd85dda4755a5e30609 325 PANTHER PTHR34069 1 325 1.5E-135 T 22-04-2016 AMK43_RS05420 890d93d379e08fd85dda4755a5e30609 325 SUPERFAMILY SSF53901 3 323 1.1E-76 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS05620 ad3c97e26a15042eccdb13c3d60ed980 591 Gene3D G3DSA:3.90.79.10 453 578 1.3E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK43_RS05620 ad3c97e26a15042eccdb13c3d60ed980 591 SUPERFAMILY SSF81891 142 442 1.07E-47 T 22-04-2016 AMK43_RS05620 ad3c97e26a15042eccdb13c3d60ed980 591 SUPERFAMILY SSF55811 454 577 3.38E-23 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK43_RS05620 ad3c97e26a15042eccdb13c3d60ed980 591 Pfam PF00293 NUDIX domain 451 571 1.2E-17 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK43_RS05620 ad3c97e26a15042eccdb13c3d60ed980 591 Pfam PF01743 Poly A polymerase head domain 23 144 4.4E-32 T 22-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 AMK43_RS05620 ad3c97e26a15042eccdb13c3d60ed980 591 PANTHER PTHR13734:SF5 12 460 6.9E-74 T 22-04-2016 AMK43_RS05620 ad3c97e26a15042eccdb13c3d60ed980 591 Pfam PF01966 HD domain 262 328 1.2E-4 T 22-04-2016 IPR006674 HD domain AMK43_RS05620 ad3c97e26a15042eccdb13c3d60ed980 591 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 171 231 6.5E-18 T 22-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain AMK43_RS05620 ad3c97e26a15042eccdb13c3d60ed980 591 ProSitePatterns PS00893 Nudix box signature. 482 503 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK43_RS05620 ad3c97e26a15042eccdb13c3d60ed980 591 Gene3D G3DSA:1.10.3090.10 391 407 6.0E-46 T 22-04-2016 AMK43_RS05620 ad3c97e26a15042eccdb13c3d60ed980 591 Gene3D G3DSA:1.10.3090.10 145 325 6.0E-46 T 22-04-2016 AMK43_RS05620 ad3c97e26a15042eccdb13c3d60ed980 591 Gene3D G3DSA:3.30.460.10 6 144 4.2E-39 T 22-04-2016 AMK43_RS05620 ad3c97e26a15042eccdb13c3d60ed980 591 SUPERFAMILY SSF81301 18 140 7.63E-32 T 22-04-2016 AMK43_RS05620 ad3c97e26a15042eccdb13c3d60ed980 591 PANTHER PTHR13734 12 460 6.9E-74 T 22-04-2016 AMK43_RS04720 4dcb70dd6b23427372fca61a41ca23a9 437 Pfam PF01546 Peptidase family M20/M25/M40 73 430 5.4E-24 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK43_RS04720 4dcb70dd6b23427372fca61a41ca23a9 437 Pfam PF07687 Peptidase dimerisation domain 180 301 2.5E-17 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS04720 4dcb70dd6b23427372fca61a41ca23a9 437 SUPERFAMILY SSF55031 254 301 6.13E-12 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS04720 4dcb70dd6b23427372fca61a41ca23a9 437 SUPERFAMILY SSF55031 182 222 6.13E-12 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS04720 4dcb70dd6b23427372fca61a41ca23a9 437 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 3 435 3.3E-202 T 22-04-2016 IPR017706 Peptidase M20/DapE, YgeY AMK43_RS04720 4dcb70dd6b23427372fca61a41ca23a9 437 PANTHER PTHR11014 1 434 1.3E-176 T 22-04-2016 AMK43_RS04720 4dcb70dd6b23427372fca61a41ca23a9 437 PANTHER PTHR11014:SF116 1 434 1.3E-176 T 22-04-2016 AMK43_RS04720 4dcb70dd6b23427372fca61a41ca23a9 437 SUPERFAMILY SSF53187 4 182 6.29E-50 T 22-04-2016 AMK43_RS04720 4dcb70dd6b23427372fca61a41ca23a9 437 SUPERFAMILY SSF53187 337 430 6.29E-50 T 22-04-2016 AMK43_RS04720 4dcb70dd6b23427372fca61a41ca23a9 437 Gene3D G3DSA:3.40.630.10 8 189 4.5E-54 T 22-04-2016 AMK43_RS04720 4dcb70dd6b23427372fca61a41ca23a9 437 Gene3D G3DSA:3.40.630.10 332 430 4.5E-54 T 22-04-2016 AMK43_RS04720 4dcb70dd6b23427372fca61a41ca23a9 437 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMK43_RS04720 4dcb70dd6b23427372fca61a41ca23a9 437 Gene3D G3DSA:3.30.70.360 190 311 7.3E-17 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 Gene3D G3DSA:3.40.50.1980 189 315 1.1E-44 T 22-04-2016 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 PRINTS PR00691 Adhesin B signature 40 61 2.0E-23 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 PRINTS PR00691 Adhesin B signature 84 103 2.0E-23 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 PRINTS PR00691 Adhesin B signature 272 290 2.0E-23 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 PRINTS PR00691 Adhesin B signature 65 83 2.0E-23 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 PRINTS PR00691 Adhesin B signature 196 213 2.0E-23 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 PRINTS PR00691 Adhesin B signature 293 311 2.0E-23 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 PANTHER PTHR30477 8 314 4.6E-106 T 22-04-2016 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 PANTHER PTHR30477:SF16 8 314 4.6E-106 T 22-04-2016 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 Pfam PF01297 Zinc-uptake complex component A periplasmic 43 313 2.4E-72 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 PRINTS PR00690 Adhesin family signature 40 58 2.8E-40 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 PRINTS PR00690 Adhesin family signature 280 299 2.8E-40 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 PRINTS PR00690 Adhesin family signature 196 217 2.8E-40 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 PRINTS PR00690 Adhesin family signature 84 101 2.8E-40 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 PRINTS PR00690 Adhesin family signature 71 84 2.8E-40 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 PRINTS PR00690 Adhesin family signature 249 267 2.8E-40 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 SUPERFAMILY SSF53807 40 315 4.91E-79 T 22-04-2016 AMK43_RS05500 447bdd8025b801aa796bb4e4ac6040f0 315 Gene3D G3DSA:3.40.50.1980 34 188 9.5E-46 T 22-04-2016 AMK43_RS03225 9b0a49023751231a5bf3ce3b57cd9e92 209 PANTHER PTHR30265 3 206 1.6E-56 T 22-04-2016 AMK43_RS03225 9b0a49023751231a5bf3ce3b57cd9e92 209 PRINTS PR00338 Transcription termination factor NUSG signature 183 199 2.2E-11 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK43_RS03225 9b0a49023751231a5bf3ce3b57cd9e92 209 PRINTS PR00338 Transcription termination factor NUSG signature 73 85 2.2E-11 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK43_RS03225 9b0a49023751231a5bf3ce3b57cd9e92 209 PRINTS PR00338 Transcription termination factor NUSG signature 165 180 2.2E-11 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK43_RS03225 9b0a49023751231a5bf3ce3b57cd9e92 209 SMART SM00738 18 139 1.9E-41 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 AMK43_RS03225 9b0a49023751231a5bf3ce3b57cd9e92 209 SUPERFAMILY SSF50104 151 206 9.46E-14 T 22-04-2016 IPR008991 Translation protein SH3-like domain AMK43_RS03225 9b0a49023751231a5bf3ce3b57cd9e92 209 ProSitePatterns PS01014 Transcription termination factor nusG signature. 190 199 - T 22-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site AMK43_RS03225 9b0a49023751231a5bf3ce3b57cd9e92 209 Pfam PF02357 Transcription termination factor nusG 19 135 3.2E-22 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 AMK43_RS03225 9b0a49023751231a5bf3ce3b57cd9e92 209 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 18 207 23.757 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK43_RS03225 9b0a49023751231a5bf3ce3b57cd9e92 209 Gene3D G3DSA:2.30.30.30 147 206 3.4E-21 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 AMK43_RS03225 9b0a49023751231a5bf3ce3b57cd9e92 209 SUPERFAMILY SSF82679 18 139 1.05E-34 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 AMK43_RS03225 9b0a49023751231a5bf3ce3b57cd9e92 209 Gene3D G3DSA:3.30.70.940 18 140 3.6E-41 T 22-04-2016 IPR006645 NusG, N-terminal GO:0006355 AMK43_RS03225 9b0a49023751231a5bf3ce3b57cd9e92 209 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 21 206 8.3E-47 T 22-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 AMK43_RS07790 047aca868ee1b8e3c0a37b6d776a32ee 181 PRINTS PR01021 OMPA domain signature 103 118 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS07790 047aca868ee1b8e3c0a37b6d776a32ee 181 PRINTS PR01021 OMPA domain signature 118 134 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS07790 047aca868ee1b8e3c0a37b6d776a32ee 181 PRINTS PR01021 OMPA domain signature 74 96 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS07790 047aca868ee1b8e3c0a37b6d776a32ee 181 Pfam PF00691 OmpA family 73 168 4.3E-23 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS07790 047aca868ee1b8e3c0a37b6d776a32ee 181 PANTHER PTHR30128 32 177 2.6E-43 T 22-04-2016 AMK43_RS07790 047aca868ee1b8e3c0a37b6d776a32ee 181 SUPERFAMILY SSF103088 62 174 5.62E-33 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS07790 047aca868ee1b8e3c0a37b6d776a32ee 181 Gene3D G3DSA:3.30.1330.60 61 174 2.6E-35 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS06050 047aca868ee1b8e3c0a37b6d776a32ee 181 PRINTS PR01021 OMPA domain signature 103 118 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS06050 047aca868ee1b8e3c0a37b6d776a32ee 181 PRINTS PR01021 OMPA domain signature 118 134 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS06050 047aca868ee1b8e3c0a37b6d776a32ee 181 PRINTS PR01021 OMPA domain signature 74 96 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS06050 047aca868ee1b8e3c0a37b6d776a32ee 181 Pfam PF00691 OmpA family 73 168 4.3E-23 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS06050 047aca868ee1b8e3c0a37b6d776a32ee 181 PANTHER PTHR30128 32 177 2.6E-43 T 22-04-2016 AMK43_RS06050 047aca868ee1b8e3c0a37b6d776a32ee 181 SUPERFAMILY SSF103088 62 174 5.62E-33 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS06050 047aca868ee1b8e3c0a37b6d776a32ee 181 Gene3D G3DSA:3.30.1330.60 61 174 2.6E-35 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS07760 047aca868ee1b8e3c0a37b6d776a32ee 181 PRINTS PR01021 OMPA domain signature 103 118 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS07760 047aca868ee1b8e3c0a37b6d776a32ee 181 PRINTS PR01021 OMPA domain signature 118 134 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS07760 047aca868ee1b8e3c0a37b6d776a32ee 181 PRINTS PR01021 OMPA domain signature 74 96 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS07760 047aca868ee1b8e3c0a37b6d776a32ee 181 Pfam PF00691 OmpA family 73 168 4.3E-23 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS07760 047aca868ee1b8e3c0a37b6d776a32ee 181 PANTHER PTHR30128 32 177 2.6E-43 T 22-04-2016 AMK43_RS07760 047aca868ee1b8e3c0a37b6d776a32ee 181 SUPERFAMILY SSF103088 62 174 5.62E-33 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS07760 047aca868ee1b8e3c0a37b6d776a32ee 181 Gene3D G3DSA:3.30.1330.60 61 174 2.6E-35 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS07445 047aca868ee1b8e3c0a37b6d776a32ee 181 PRINTS PR01021 OMPA domain signature 103 118 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS07445 047aca868ee1b8e3c0a37b6d776a32ee 181 PRINTS PR01021 OMPA domain signature 118 134 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS07445 047aca868ee1b8e3c0a37b6d776a32ee 181 PRINTS PR01021 OMPA domain signature 74 96 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS07445 047aca868ee1b8e3c0a37b6d776a32ee 181 Pfam PF00691 OmpA family 73 168 4.3E-23 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS07445 047aca868ee1b8e3c0a37b6d776a32ee 181 PANTHER PTHR30128 32 177 2.6E-43 T 22-04-2016 AMK43_RS07445 047aca868ee1b8e3c0a37b6d776a32ee 181 SUPERFAMILY SSF103088 62 174 5.62E-33 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS07445 047aca868ee1b8e3c0a37b6d776a32ee 181 Gene3D G3DSA:3.30.1330.60 61 174 2.6E-35 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS01020 e9320052b7c0b2c49189081200ecb60f 154 SUPERFAMILY SSF52121 4 153 3.4E-62 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK43_RS01020 e9320052b7c0b2c49189081200ecb60f 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 1.0E-56 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK43_RS01020 e9320052b7c0b2c49189081200ecb60f 154 Gene3D G3DSA:3.40.50.960 2 153 1.2E-65 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK43_RS01020 e9320052b7c0b2c49189081200ecb60f 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 13 149 4.3E-56 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK43_RS01020 e9320052b7c0b2c49189081200ecb60f 154 PANTHER PTHR21058 1 153 3.9E-75 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK43_RS01020 e9320052b7c0b2c49189081200ecb60f 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 153 30.426 T 22-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK43_RS06590 857fd12205fda4479f4784a6901f71fa 243 SUPERFAMILY SSF53300 34 168 1.26E-12 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK43_RS06590 857fd12205fda4479f4784a6901f71fa 243 Gene3D G3DSA:3.40.50.410 34 166 1.4E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK43_RS04290 cb5b7a1f5a2a24d8712cfbbaa28bd920 362 Gene3D G3DSA:3.30.70.270 62 160 1.5E-22 T 22-04-2016 AMK43_RS04290 cb5b7a1f5a2a24d8712cfbbaa28bd920 362 SUPERFAMILY SSF56672 3 230 7.83E-72 T 22-04-2016 AMK43_RS04290 cb5b7a1f5a2a24d8712cfbbaa28bd920 362 PANTHER PTHR11076 4 352 1.3E-115 T 22-04-2016 AMK43_RS04290 cb5b7a1f5a2a24d8712cfbbaa28bd920 362 Pfam PF00817 impB/mucB/samB family 9 152 4.4E-43 T 22-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS04290 cb5b7a1f5a2a24d8712cfbbaa28bd920 362 Hamap MF_01113 DNA polymerase IV [dinB]. 2 349 31.163 T 22-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS04290 cb5b7a1f5a2a24d8712cfbbaa28bd920 362 Gene3D G3DSA:1.10.150.20 170 234 2.0E-13 T 22-04-2016 AMK43_RS04290 cb5b7a1f5a2a24d8712cfbbaa28bd920 362 Gene3D G3DSA:3.30.1490.100 241 343 2.2E-26 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS04290 cb5b7a1f5a2a24d8712cfbbaa28bd920 362 SUPERFAMILY SSF100879 238 337 1.05E-23 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS04290 cb5b7a1f5a2a24d8712cfbbaa28bd920 362 Pfam PF11799 impB/mucB/samB family C-terminal domain 237 341 3.6E-18 T 22-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS05145 e53ed6dbc200f5f431791901ea0356b2 451 SUPERFAMILY SSF56037 351 409 7.06E-13 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK43_RS05145 e53ed6dbc200f5f431791901ea0356b2 451 SMART SM00977 360 445 2.8E-10 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMK43_RS05145 e53ed6dbc200f5f431791901ea0356b2 451 Pfam PF11734 TilS substrate C-terminal domain 368 409 6.3E-9 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMK43_RS05145 e53ed6dbc200f5f431791901ea0356b2 451 PANTHER PTHR11807 7 442 5.2E-69 T 22-04-2016 AMK43_RS05145 e53ed6dbc200f5f431791901ea0356b2 451 Pfam PF01171 PP-loop family 25 205 5.7E-52 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AMK43_RS05145 e53ed6dbc200f5f431791901ea0356b2 451 Gene3D G3DSA:3.40.50.620 14 182 6.1E-18 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS05145 e53ed6dbc200f5f431791901ea0356b2 451 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 362 402 5.0E-14 T 22-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMK43_RS05145 e53ed6dbc200f5f431791901ea0356b2 451 SUPERFAMILY SSF52402 14 223 3.96E-51 T 22-04-2016 AMK43_RS05145 e53ed6dbc200f5f431791901ea0356b2 451 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 25 208 1.0E-56 T 22-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMK43_RS05145 e53ed6dbc200f5f431791901ea0356b2 451 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 7 290 22.139 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMK43_RS05145 e53ed6dbc200f5f431791901ea0356b2 451 PANTHER PTHR11807:SF2 7 442 5.2E-69 T 22-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 AMK43_RS06765 49eec9b55513cdb946a93df58f1903dd 211 Pfam PF00834 Ribulose-phosphate 3 epimerase family 7 199 4.0E-80 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK43_RS06765 49eec9b55513cdb946a93df58f1903dd 211 Gene3D G3DSA:3.20.20.70 2 210 3.6E-92 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS06765 49eec9b55513cdb946a93df58f1903dd 211 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 34 48 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK43_RS06765 49eec9b55513cdb946a93df58f1903dd 211 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK43_RS06765 49eec9b55513cdb946a93df58f1903dd 211 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 7 211 1.9E-86 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK43_RS06765 49eec9b55513cdb946a93df58f1903dd 211 PIRSF PIRSF001461 1 211 2.0E-90 T 22-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK43_RS06765 49eec9b55513cdb946a93df58f1903dd 211 PANTHER PTHR11749 3 211 5.2E-121 T 22-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 AMK43_RS06765 49eec9b55513cdb946a93df58f1903dd 211 SUPERFAMILY SSF51366 4 210 8.07E-74 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK43_RS01395 3c98445688eb5c214ee4c1cc7b21e53f 234 PANTHER PTHR21091 1 217 1.2E-75 T 22-04-2016 AMK43_RS01395 3c98445688eb5c214ee4c1cc7b21e53f 234 Gene3D G3DSA:3.40.1010.10 1 109 8.6E-21 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AMK43_RS01395 3c98445688eb5c214ee4c1cc7b21e53f 234 SUPERFAMILY SSF53790 1 216 2.22E-73 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK43_RS01395 3c98445688eb5c214ee4c1cc7b21e53f 234 PANTHER PTHR21091:SF18 1 217 1.2E-75 T 22-04-2016 AMK43_RS01395 3c98445688eb5c214ee4c1cc7b21e53f 234 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 198 6.5E-32 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK43_RS01395 3c98445688eb5c214ee4c1cc7b21e53f 234 Gene3D G3DSA:3.30.950.10 110 219 4.2E-35 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 AMK43_RS01395 3c98445688eb5c214ee4c1cc7b21e53f 234 PIRSF PIRSF005917 1 232 4.8E-88 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS01395 3c98445688eb5c214ee4c1cc7b21e53f 234 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1 219 6.7E-73 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS01395 3c98445688eb5c214ee4c1cc7b21e53f 234 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 1 218 35.555 T 22-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS01795 473b18222688027252df66f9f5e4fdac 227 PIRSF PIRSF004848 2 227 6.8E-64 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 AMK43_RS01795 473b18222688027252df66f9f5e4fdac 227 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 8 226 1.6E-48 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 AMK43_RS01795 473b18222688027252df66f9f5e4fdac 227 PANTHER PTHR10146:SF0 7 225 1.2E-59 T 22-04-2016 AMK43_RS01795 473b18222688027252df66f9f5e4fdac 227 Pfam PF01168 Alanine racemase, N-terminal domain 50 226 8.9E-13 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS01795 473b18222688027252df66f9f5e4fdac 227 Gene3D G3DSA:3.20.20.10 7 225 1.1E-59 T 22-04-2016 IPR029066 PLP-binding barrel AMK43_RS01795 473b18222688027252df66f9f5e4fdac 227 PANTHER PTHR10146 7 225 1.2E-59 T 22-04-2016 IPR011078 Uncharacterised protein family UPF0001 AMK43_RS01795 473b18222688027252df66f9f5e4fdac 227 SUPERFAMILY SSF51419 4 226 1.59E-59 T 22-04-2016 IPR029066 PLP-binding barrel AMK43_RS06565 f811321b4da632c5b320ccfcaf9dcf30 235 PANTHER PTHR11609:SF2 3 233 2.2E-115 T 22-04-2016 AMK43_RS06565 f811321b4da632c5b320ccfcaf9dcf30 235 Pfam PF01259 SAICAR synthetase 7 230 1.8E-62 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK43_RS06565 f811321b4da632c5b320ccfcaf9dcf30 235 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK43_RS06565 f811321b4da632c5b320ccfcaf9dcf30 235 PANTHER PTHR11609 3 233 2.2E-115 T 22-04-2016 AMK43_RS06565 f811321b4da632c5b320ccfcaf9dcf30 235 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 233 1.6E-74 T 22-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK43_RS06565 f811321b4da632c5b320ccfcaf9dcf30 235 Gene3D G3DSA:3.30.200.20 7 93 5.3E-38 T 22-04-2016 AMK43_RS06565 f811321b4da632c5b320ccfcaf9dcf30 235 SUPERFAMILY SSF56104 2 233 1.9E-79 T 22-04-2016 AMK43_RS06565 f811321b4da632c5b320ccfcaf9dcf30 235 Gene3D G3DSA:3.30.470.20 94 220 5.0E-51 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK43_RS06565 f811321b4da632c5b320ccfcaf9dcf30 235 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 22-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK43_RS06565 f811321b4da632c5b320ccfcaf9dcf30 235 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 235 31.648 T 22-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK43_RS03435 cc0e4994ba14b14097dcec50ec7c84d1 353 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 4 350 34.887 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMK43_RS03435 cc0e4994ba14b14097dcec50ec7c84d1 353 Gene3D G3DSA:2.40.30.10 292 350 1.2E-6 T 22-04-2016 AMK43_RS03435 cc0e4994ba14b14097dcec50ec7c84d1 353 Gene3D G3DSA:2.30.30.280 215 268 1.2E-15 T 22-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 AMK43_RS03435 cc0e4994ba14b14097dcec50ec7c84d1 353 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 349 2.0E-94 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMK43_RS03435 cc0e4994ba14b14097dcec50ec7c84d1 353 SUPERFAMILY SSF52402 2 242 8.6E-54 T 22-04-2016 AMK43_RS03435 cc0e4994ba14b14097dcec50ec7c84d1 353 PANTHER PTHR11933:SF10 1 350 9.0E-130 T 22-04-2016 AMK43_RS03435 cc0e4994ba14b14097dcec50ec7c84d1 353 Pfam PF03054 tRNA methyl transferase 4 349 2.4E-98 T 22-04-2016 AMK43_RS03435 cc0e4994ba14b14097dcec50ec7c84d1 353 PANTHER PTHR11933 1 350 9.0E-130 T 22-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 AMK43_RS03435 cc0e4994ba14b14097dcec50ec7c84d1 353 Gene3D G3DSA:3.40.50.620 2 201 4.3E-74 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS06115 413423ebfec4db118b6e7647775bc713 598 PANTHER PTHR35340:SF3 4 438 1.1E-53 T 22-04-2016 AMK43_RS06115 413423ebfec4db118b6e7647775bc713 598 Pfam PF00085 Thioredoxin 503 595 8.4E-16 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 AMK43_RS06115 413423ebfec4db118b6e7647775bc713 598 Pfam PF05935 Arylsulfotransferase (ASST) 56 384 2.9E-18 T 22-04-2016 IPR010262 Arylsulfotransferase AMK43_RS06115 413423ebfec4db118b6e7647775bc713 598 PANTHER PTHR35340 4 438 1.1E-53 T 22-04-2016 AMK43_RS06115 413423ebfec4db118b6e7647775bc713 598 SUPERFAMILY SSF52833 503 598 1.29E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS06115 413423ebfec4db118b6e7647775bc713 598 Gene3D G3DSA:3.40.30.10 502 597 7.7E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS08960 34cc0c0e3768dacd4157f5b21f14c23c 237 PANTHER PTHR30371:SF4 6 236 2.3E-76 T 22-04-2016 AMK43_RS08960 34cc0c0e3768dacd4157f5b21f14c23c 237 PANTHER PTHR30371 6 236 2.3E-76 T 22-04-2016 AMK43_RS08960 34cc0c0e3768dacd4157f5b21f14c23c 237 Pfam PF00902 Sec-independent protein translocase protein (TatC) 11 215 5.8E-49 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK43_RS08960 34cc0c0e3768dacd4157f5b21f14c23c 237 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 220 7.6E-53 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK43_RS08960 34cc0c0e3768dacd4157f5b21f14c23c 237 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 79 97 3.8E-31 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK43_RS08960 34cc0c0e3768dacd4157f5b21f14c23c 237 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 3.8E-31 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK43_RS08960 34cc0c0e3768dacd4157f5b21f14c23c 237 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 97 123 3.8E-31 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK43_RS08960 34cc0c0e3768dacd4157f5b21f14c23c 237 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 148 176 3.8E-31 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK43_RS08960 34cc0c0e3768dacd4157f5b21f14c23c 237 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 236 15.511 T 22-04-2016 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 AMK43_RS02020 12f62840644b8ede3f65be0e0fd003c7 198 Gene3D G3DSA:3.10.580.10 67 191 1.5E-22 T 22-04-2016 AMK43_RS02020 12f62840644b8ede3f65be0e0fd003c7 198 SUPERFAMILY SSF46785 1 60 5.77E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02020 12f62840644b8ede3f65be0e0fd003c7 198 Pfam PF00571 CBS domain 133 187 7.2E-8 T 22-04-2016 IPR000644 CBS domain AMK43_RS02020 12f62840644b8ede3f65be0e0fd003c7 198 Pfam PF00571 CBS domain 67 119 1.9E-8 T 22-04-2016 IPR000644 CBS domain AMK43_RS02020 12f62840644b8ede3f65be0e0fd003c7 198 SMART SM00116 73 120 0.0051 T 22-04-2016 IPR000644 CBS domain AMK43_RS02020 12f62840644b8ede3f65be0e0fd003c7 198 SMART SM00116 139 190 3.0 T 22-04-2016 IPR000644 CBS domain AMK43_RS02020 12f62840644b8ede3f65be0e0fd003c7 198 SUPERFAMILY SSF54631 66 191 2.44E-24 T 22-04-2016 AMK43_RS02020 12f62840644b8ede3f65be0e0fd003c7 198 Pfam PF08279 HTH domain 6 58 2.4E-11 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 AMK43_RS02020 12f62840644b8ede3f65be0e0fd003c7 198 Gene3D G3DSA:1.10.10.10 1 61 1.3E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02020 12f62840644b8ede3f65be0e0fd003c7 198 PANTHER PTHR11911 67 195 1.3E-52 T 22-04-2016 AMK43_RS02020 12f62840644b8ede3f65be0e0fd003c7 198 PANTHER PTHR11911:SF55 67 195 1.3E-52 T 22-04-2016 AMK43_RS02020 12f62840644b8ede3f65be0e0fd003c7 198 PIRSF PIRSF026546 1 196 1.8E-73 T 22-04-2016 IPR016842 Protein of unknown function UCP026546, HtH-CBS AMK43_RS07675 863393eab534889edfdc762baadb1704 294 PANTHER PTHR12128:SF34 1 293 1.6E-130 T 22-04-2016 AMK43_RS07675 863393eab534889edfdc762baadb1704 294 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 22-04-2016 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07675 863393eab534889edfdc762baadb1704 294 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 22-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07675 863393eab534889edfdc762baadb1704 294 PANTHER PTHR12128 1 293 1.6E-130 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS07675 863393eab534889edfdc762baadb1704 294 SUPERFAMILY SSF51569 2 291 1.36E-103 T 22-04-2016 AMK43_RS07675 863393eab534889edfdc762baadb1704 294 SMART SM01130 2 291 1.6E-137 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS07675 863393eab534889edfdc762baadb1704 294 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 289 63.74 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07675 863393eab534889edfdc762baadb1704 294 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 289 2.9E-112 T 22-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07675 863393eab534889edfdc762baadb1704 294 Gene3D G3DSA:3.20.20.70 1 293 2.1E-119 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS07675 863393eab534889edfdc762baadb1704 294 PIRSF PIRSF001365 1 293 9.9E-95 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS07675 863393eab534889edfdc762baadb1704 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 3.0E-32 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS07675 863393eab534889edfdc762baadb1704 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 3.0E-32 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS07675 863393eab534889edfdc762baadb1704 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 3.0E-32 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS07675 863393eab534889edfdc762baadb1704 294 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 3.0E-32 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS07675 863393eab534889edfdc762baadb1704 294 Pfam PF00701 Dihydrodipicolinate synthetase family 2 289 6.5E-99 T 22-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 SUPERFAMILY SSF51621 3 75 1.29E-102 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 SUPERFAMILY SSF51621 167 341 1.29E-102 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 PRINTS PR01050 Pyruvate kinase family signature 59 75 2.8E-82 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 PRINTS PR01050 Pyruvate kinase family signature 294 312 2.8E-82 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 PRINTS PR01050 Pyruvate kinase family signature 186 200 2.8E-82 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 PRINTS PR01050 Pyruvate kinase family signature 313 329 2.8E-82 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 PRINTS PR01050 Pyruvate kinase family signature 217 243 2.8E-82 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 PRINTS PR01050 Pyruvate kinase family signature 244 268 2.8E-82 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 PRINTS PR01050 Pyruvate kinase family signature 269 293 2.8E-82 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 SUPERFAMILY SSF52935 323 469 7.72E-33 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 469 3.2E-186 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 Gene3D G3DSA:3.20.20.60 169 325 1.8E-117 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 Gene3D G3DSA:3.20.20.60 3 72 1.8E-117 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 PANTHER PTHR11817 1 471 9.0E-255 T 22-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 SUPERFAMILY SSF50800 70 167 1.34E-29 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 Gene3D G3DSA:3.40.1380.20 326 469 1.4E-43 T 22-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 Gene3D G3DSA:2.40.33.10 73 168 7.0E-33 T 22-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 22-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 Pfam PF00224 Pyruvate kinase, barrel domain 2 340 4.8E-156 T 22-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS06680 c506e2fdd8792893d95ab90c46fb7290 471 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 466 3.7E-30 T 22-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 AMK43_RS10215 0e694a774c0953f25bf309cccd0b17aa 472 PANTHER PTHR30175:SF3 7 469 4.9E-131 T 22-04-2016 AMK43_RS10215 0e694a774c0953f25bf309cccd0b17aa 472 Gene3D G3DSA:3.30.1360.60 2 79 2.4E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS10215 0e694a774c0953f25bf309cccd0b17aa 472 Pfam PF00367 phosphotransferase system, EIIB 8 38 5.6E-12 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMK43_RS10215 0e694a774c0953f25bf309cccd0b17aa 472 PANTHER PTHR30175 7 469 4.9E-131 T 22-04-2016 AMK43_RS10215 0e694a774c0953f25bf309cccd0b17aa 472 SUPERFAMILY SSF55604 6 79 1.83E-13 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS10215 0e694a774c0953f25bf309cccd0b17aa 472 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMK43_RS10215 0e694a774c0953f25bf309cccd0b17aa 472 Pfam PF02378 Phosphotransferase system, EIIC 117 403 8.0E-28 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMK43_RS01675 c344f30dcfb42e63d89d4783c27d394f 254 PANTHER PTHR30514:SF1 1 248 5.1E-40 T 22-04-2016 AMK43_RS01675 c344f30dcfb42e63d89d4783c27d394f 254 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 69 7.3E-17 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AMK43_RS01675 c344f30dcfb42e63d89d4783c27d394f 254 Pfam PF01380 SIS domain 117 225 7.3E-12 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK43_RS01675 c344f30dcfb42e63d89d4783c27d394f 254 PANTHER PTHR30514 1 248 5.1E-40 T 22-04-2016 AMK43_RS01675 c344f30dcfb42e63d89d4783c27d394f 254 SUPERFAMILY SSF53697 87 248 3.42E-23 T 22-04-2016 AMK43_RS01675 c344f30dcfb42e63d89d4783c27d394f 254 SUPERFAMILY SSF46689 4 70 5.73E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS01675 c344f30dcfb42e63d89d4783c27d394f 254 Gene3D G3DSA:3.40.50.10490 60 248 1.3E-25 T 22-04-2016 AMK43_RS01675 c344f30dcfb42e63d89d4783c27d394f 254 Gene3D G3DSA:1.10.10.10 3 59 1.6E-18 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS00940 b9a50f64e1ddf94f593d41205e84fd36 169 PANTHER PTHR23091 1 169 5.3E-18 T 22-04-2016 AMK43_RS00940 b9a50f64e1ddf94f593d41205e84fd36 169 Pfam PF13420 Acetyltransferase (GNAT) domain 3 161 3.9E-13 T 22-04-2016 AMK43_RS00940 b9a50f64e1ddf94f593d41205e84fd36 169 SUPERFAMILY SSF55729 1 167 6.15E-31 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS00940 b9a50f64e1ddf94f593d41205e84fd36 169 Gene3D G3DSA:3.40.630.30 1 168 1.4E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS00970 77fe63c8cd4746a3d435f6effab859b7 313 Pfam PF08279 HTH domain 13 71 1.1E-8 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 AMK43_RS00970 77fe63c8cd4746a3d435f6effab859b7 313 Pfam PF13280 WYL domain 146 306 9.4E-19 T 22-04-2016 IPR026881 WYL domain AMK43_RS00970 77fe63c8cd4746a3d435f6effab859b7 313 Gene3D G3DSA:1.10.10.10 13 75 7.9E-9 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS00970 77fe63c8cd4746a3d435f6effab859b7 313 PANTHER PTHR34580:SF3 1 222 1.3E-12 T 22-04-2016 AMK43_RS00970 77fe63c8cd4746a3d435f6effab859b7 313 PANTHER PTHR34580 1 222 1.3E-12 T 22-04-2016 AMK43_RS09810 30e9d81fb9a8d77f4766d76b0a448b3e 101 PANTHER PTHR37828:SF1 1 98 2.2E-20 T 22-04-2016 AMK43_RS09810 30e9d81fb9a8d77f4766d76b0a448b3e 101 PANTHER PTHR37828 1 98 2.2E-20 T 22-04-2016 AMK43_RS09810 30e9d81fb9a8d77f4766d76b0a448b3e 101 SUPERFAMILY SSF54909 1 83 3.22E-14 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel AMK43_RS09810 30e9d81fb9a8d77f4766d76b0a448b3e 101 Gene3D G3DSA:3.30.70.1060 11 83 7.2E-8 T 22-04-2016 AMK43_RS09810 30e9d81fb9a8d77f4766d76b0a448b3e 101 Pfam PF03795 YCII-related domain 1 82 3.6E-10 T 22-04-2016 IPR005545 YCII-related AMK43_RS07265 99a3015989cbf3ca15891656d7cd649a 221 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 215 35.777 T 22-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 AMK43_RS07265 99a3015989cbf3ca15891656d7cd649a 221 Pfam PF01791 DeoC/LacD family aldolase 7 209 4.6E-21 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 AMK43_RS07265 99a3015989cbf3ca15891656d7cd649a 221 SMART SM01133 2 213 3.8E-98 T 22-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 AMK43_RS07265 99a3015989cbf3ca15891656d7cd649a 221 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 211 1.3E-84 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 AMK43_RS07265 99a3015989cbf3ca15891656d7cd649a 221 SUPERFAMILY SSF51569 1 214 5.86E-84 T 22-04-2016 AMK43_RS07265 99a3015989cbf3ca15891656d7cd649a 221 PIRSF PIRSF001357 1 220 1.3E-78 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 AMK43_RS07265 99a3015989cbf3ca15891656d7cd649a 221 PANTHER PTHR10889 1 217 4.6E-104 T 22-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 AMK43_RS07265 99a3015989cbf3ca15891656d7cd649a 221 Gene3D G3DSA:3.20.20.70 1 215 1.7E-91 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS07265 99a3015989cbf3ca15891656d7cd649a 221 PANTHER PTHR10889:SF1 1 217 4.6E-104 T 22-04-2016 AMK43_RS06465 d4b80b28057037709b0d89812ae1db5a 230 Gene3D G3DSA:3.40.50.300 1 220 1.2E-71 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06465 d4b80b28057037709b0d89812ae1db5a 230 SUPERFAMILY SSF52540 1 221 2.53E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06465 d4b80b28057037709b0d89812ae1db5a 230 Pfam PF00005 ABC transporter 21 169 4.8E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS06465 d4b80b28057037709b0d89812ae1db5a 230 PANTHER PTHR24220:SF578 3 224 1.3E-120 T 22-04-2016 AMK43_RS06465 d4b80b28057037709b0d89812ae1db5a 230 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS06465 d4b80b28057037709b0d89812ae1db5a 230 SMART SM00382 30 230 2.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS06465 d4b80b28057037709b0d89812ae1db5a 230 PANTHER PTHR24220 3 224 1.3E-120 T 22-04-2016 AMK43_RS03080 f6adde4a0664add6afb2770a6a4c9d40 303 SUPERFAMILY SSF111331 7 302 4.8E-54 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain AMK43_RS03080 f6adde4a0664add6afb2770a6a4c9d40 303 PANTHER PTHR12358 8 301 5.7E-33 T 22-04-2016 AMK43_RS03080 f6adde4a0664add6afb2770a6a4c9d40 303 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 8 300 1.4E-43 T 22-04-2016 IPR005218 Diacylglycerol/lipid kinase AMK43_RS03080 f6adde4a0664add6afb2770a6a4c9d40 303 SMART SM00046 9 143 0.0012 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMK43_RS03080 f6adde4a0664add6afb2770a6a4c9d40 303 Pfam PF00781 Diacylglycerol kinase catalytic domain 9 131 5.9E-21 T 22-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 AMK43_RS03065 100a2da15e1bdfb1d529a78cafb91f48 591 SMART SM00490 254 335 7.2E-32 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS03065 100a2da15e1bdfb1d529a78cafb91f48 591 Pfam PF00271 Helicase conserved C-terminal domain 226 335 1.5E-26 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS03065 100a2da15e1bdfb1d529a78cafb91f48 591 SMART SM00487 21 218 1.8E-60 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK43_RS03065 100a2da15e1bdfb1d529a78cafb91f48 591 Gene3D G3DSA:3.40.50.300 1 216 4.8E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03065 100a2da15e1bdfb1d529a78cafb91f48 591 Pfam PF00270 DEAD/DEAH box helicase 27 190 2.1E-49 T 22-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 AMK43_RS03065 100a2da15e1bdfb1d529a78cafb91f48 591 Gene3D G3DSA:3.40.50.300 217 369 4.3E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03065 100a2da15e1bdfb1d529a78cafb91f48 591 PANTHER PTHR24031:SF261 475 591 6.3E-198 T 22-04-2016 AMK43_RS03065 100a2da15e1bdfb1d529a78cafb91f48 591 PANTHER PTHR24031:SF261 1 444 6.3E-198 T 22-04-2016 AMK43_RS03065 100a2da15e1bdfb1d529a78cafb91f48 591 SUPERFAMILY SSF52540 71 355 2.01E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03065 100a2da15e1bdfb1d529a78cafb91f48 591 Pfam PF03880 DbpA RNA binding domain 447 508 2.2E-16 T 22-04-2016 IPR005580 DbpA, RNA-binding domain AMK43_RS03065 100a2da15e1bdfb1d529a78cafb91f48 591 PANTHER PTHR24031 475 591 6.3E-198 T 22-04-2016 AMK43_RS03065 100a2da15e1bdfb1d529a78cafb91f48 591 PANTHER PTHR24031 1 444 6.3E-198 T 22-04-2016 AMK43_RS03065 100a2da15e1bdfb1d529a78cafb91f48 591 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 22-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site AMK43_RS02130 6553f390912d49fdc4c0d737bf109d07 209 PANTHER PTHR34582:SF6 1 201 4.6E-47 T 22-04-2016 AMK43_RS02130 6553f390912d49fdc4c0d737bf109d07 209 Pfam PF04239 Protein of unknown function (DUF421) 88 189 7.7E-26 T 22-04-2016 IPR007353 Protein of unknown function DUF421 AMK43_RS02130 6553f390912d49fdc4c0d737bf109d07 209 Gene3D G3DSA:3.30.240.20 155 209 6.1E-17 T 22-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain AMK43_RS02130 6553f390912d49fdc4c0d737bf109d07 209 PANTHER PTHR34582 1 201 4.6E-47 T 22-04-2016 AMK43_RS02130 6553f390912d49fdc4c0d737bf109d07 209 Gene3D G3DSA:3.30.240.20 82 153 2.4E-18 T 22-04-2016 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain AMK43_RS00665 49d3739246b340b937d64ca2da9e10f8 527 PRINTS PR00762 Chloride channel signature 167 186 5.4E-26 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 AMK43_RS00665 49d3739246b340b937d64ca2da9e10f8 527 PRINTS PR00762 Chloride channel signature 87 104 5.4E-26 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 AMK43_RS00665 49d3739246b340b937d64ca2da9e10f8 527 PRINTS PR00762 Chloride channel signature 368 384 5.4E-26 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 AMK43_RS00665 49d3739246b340b937d64ca2da9e10f8 527 PRINTS PR00762 Chloride channel signature 386 405 5.4E-26 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 AMK43_RS00665 49d3739246b340b937d64ca2da9e10f8 527 PRINTS PR00762 Chloride channel signature 333 353 5.4E-26 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 AMK43_RS00665 49d3739246b340b937d64ca2da9e10f8 527 Pfam PF02080 TrkA-C domain 455 517 2.4E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK43_RS00665 49d3739246b340b937d64ca2da9e10f8 527 Gene3D G3DSA:1.10.3080.10 13 431 1.7E-90 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 AMK43_RS00665 49d3739246b340b937d64ca2da9e10f8 527 SUPERFAMILY SSF116726 446 514 1.83E-8 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK43_RS00665 49d3739246b340b937d64ca2da9e10f8 527 Pfam PF00654 Voltage gated chloride channel 75 417 2.8E-87 T 22-04-2016 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 AMK43_RS00665 49d3739246b340b937d64ca2da9e10f8 527 PANTHER PTHR11689 2 429 3.2E-68 T 22-04-2016 AMK43_RS00665 49d3739246b340b937d64ca2da9e10f8 527 PANTHER PTHR11689:SF14 2 429 3.2E-68 T 22-04-2016 AMK43_RS00665 49d3739246b340b937d64ca2da9e10f8 527 SUPERFAMILY SSF81340 12 434 9.16E-100 T 22-04-2016 IPR014743 Chloride channel, core GO:0005216|GO:0055085 AMK43_RS00665 49d3739246b340b937d64ca2da9e10f8 527 Gene3D G3DSA:3.30.70.1450 457 515 2.6E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK43_RS03565 d769974343183933337230791789554d 757 Gene3D G3DSA:3.40.50.2000 2 423 4.2E-140 T 22-04-2016 AMK43_RS03565 d769974343183933337230791789554d 757 PANTHER PTHR11468 35 752 2.1E-278 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK43_RS03565 d769974343183933337230791789554d 757 PIRSF PIRSF000460 1 757 1.3E-191 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK43_RS03565 d769974343183933337230791789554d 757 PANTHER PTHR11468:SF3 35 752 2.1E-278 T 22-04-2016 AMK43_RS03565 d769974343183933337230791789554d 757 SUPERFAMILY SSF53756 3 754 8.63E-248 T 22-04-2016 AMK43_RS03565 d769974343183933337230791789554d 757 Pfam PF00343 Carbohydrate phosphorylase 79 752 6.2E-255 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK43_RS03565 d769974343183933337230791789554d 757 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 2 752 3.5E-264 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK43_RS03565 d769974343183933337230791789554d 757 Gene3D G3DSA:3.40.50.2000 424 738 2.3E-114 T 22-04-2016 AMK43_RS03565 d769974343183933337230791789554d 757 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 597 609 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK43_RS06555 d1548429a6dca5fd33a7cae596a889b1 448 SUPERFAMILY SSF53271 246 443 8.07E-58 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS06555 d1548429a6dca5fd33a7cae596a889b1 448 Gene3D G3DSA:3.40.50.2020 267 429 3.5E-39 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS06555 d1548429a6dca5fd33a7cae596a889b1 448 PIRSF PIRSF000485 1 447 1.0E-145 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AMK43_RS06555 d1548429a6dca5fd33a7cae596a889b1 448 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 17 444 6.5E-128 T 22-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 AMK43_RS06555 d1548429a6dca5fd33a7cae596a889b1 448 Gene3D G3DSA:3.60.20.10 2 251 2.0E-59 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK43_RS06555 d1548429a6dca5fd33a7cae596a889b1 448 PANTHER PTHR11907 2 443 8.5E-187 T 22-04-2016 AMK43_RS06555 d1548429a6dca5fd33a7cae596a889b1 448 SUPERFAMILY SSF56235 2 236 7.55E-56 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK43_RS06555 d1548429a6dca5fd33a7cae596a889b1 448 PANTHER PTHR11907:SF0 2 443 8.5E-187 T 22-04-2016 AMK43_RS06555 d1548429a6dca5fd33a7cae596a889b1 448 Pfam PF00156 Phosphoribosyl transferase domain 275 379 6.1E-10 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK43_RS06555 d1548429a6dca5fd33a7cae596a889b1 448 Pfam PF13537 Glutamine amidotransferase domain 89 207 1.6E-19 T 22-04-2016 IPR017932 Glutamine amidotransferase type 2 domain AMK43_RS05640 c29ef8890edcb786946283c1e3c6d1a4 548 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 283 492 1.5E-53 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AMK43_RS05640 c29ef8890edcb786946283c1e3c6d1a4 548 PANTHER PTHR33209 70 509 6.3E-109 T 22-04-2016 AMK43_RS05640 c29ef8890edcb786946283c1e3c6d1a4 548 PIRSF PIRSF001217 1 546 5.7E-131 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AMK43_RS05640 c29ef8890edcb786946283c1e3c6d1a4 548 SUPERFAMILY SSF52096 65 153 1.37E-9 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS05640 c29ef8890edcb786946283c1e3c6d1a4 548 SUPERFAMILY SSF52096 191 252 1.37E-9 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS05640 c29ef8890edcb786946283c1e3c6d1a4 548 SUPERFAMILY SSF52096 423 483 6.21E-36 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS05640 c29ef8890edcb786946283c1e3c6d1a4 548 Gene3D G3DSA:3.90.226.10 277 384 2.4E-48 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS05640 c29ef8890edcb786946283c1e3c6d1a4 548 Gene3D G3DSA:3.90.226.10 422 501 2.4E-48 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS05640 c29ef8890edcb786946283c1e3c6d1a4 548 Gene3D G3DSA:3.90.226.10 14 149 3.2E-26 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS05640 c29ef8890edcb786946283c1e3c6d1a4 548 Gene3D G3DSA:3.90.226.10 192 262 3.2E-26 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS05640 c29ef8890edcb786946283c1e3c6d1a4 548 SUPERFAMILY SSF52096 280 392 6.21E-36 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS05640 c29ef8890edcb786946283c1e3c6d1a4 548 PANTHER PTHR33209:SF1 70 509 6.3E-109 T 22-04-2016 AMK43_RS05640 c29ef8890edcb786946283c1e3c6d1a4 548 Pfam PF01343 Peptidase family S49 345 495 2.7E-37 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMK43_RS05640 c29ef8890edcb786946283c1e3c6d1a4 548 Pfam PF01343 Peptidase family S49 113 255 1.0E-12 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMK43_RS11160 b17ac4ccd58cd0a76a3bffa8a41a836f 281 Pfam PF01757 Acyltransferase family 7 263 4.6E-16 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 AMK43_RS06010 1b070d31dd1e89b81b94cac4a6f78fca 305 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 68 235 3.9E-9 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK43_RS06010 1b070d31dd1e89b81b94cac4a6f78fca 305 PANTHER PTHR11371 52 214 2.8E-17 T 22-04-2016 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 AMK43_RS06010 1b070d31dd1e89b81b94cac4a6f78fca 305 SUPERFAMILY SSF56219 52 298 8.24E-24 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK43_RS06010 1b070d31dd1e89b81b94cac4a6f78fca 305 SMART SM00476 54 299 4.5E-4 T 22-04-2016 IPR016202 Deoxyribonuclease I GO:0004536|GO:0006308 AMK43_RS06010 1b070d31dd1e89b81b94cac4a6f78fca 305 Gene3D G3DSA:3.60.10.10 53 295 3.7E-47 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK43_RS11385 77dc7b5d1e634c54059bbf21b11e8141 339 SUPERFAMILY SSF53756 1 335 2.54E-69 T 22-04-2016 AMK43_RS11385 77dc7b5d1e634c54059bbf21b11e8141 339 PANTHER PTHR30160:SF1 1 335 1.9E-63 T 22-04-2016 AMK43_RS11385 77dc7b5d1e634c54059bbf21b11e8141 339 Gene3D G3DSA:3.40.50.2000 1 139 4.7E-38 T 22-04-2016 AMK43_RS11385 77dc7b5d1e634c54059bbf21b11e8141 339 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 71 291 1.3E-30 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AMK43_RS11385 77dc7b5d1e634c54059bbf21b11e8141 339 PANTHER PTHR30160 1 335 1.9E-63 T 22-04-2016 AMK43_RS11385 77dc7b5d1e634c54059bbf21b11e8141 339 Gene3D G3DSA:3.40.50.2000 159 335 8.7E-31 T 22-04-2016 AMK43_RS09075 f40da711dbdc1c3bf25b0940ddeafc96 105 PIRSF PIRSF000077 1 105 3.2E-29 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK43_RS09075 f40da711dbdc1c3bf25b0940ddeafc96 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 15 104 2.9E-29 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK43_RS09075 f40da711dbdc1c3bf25b0940ddeafc96 105 Pfam PF00085 Thioredoxin 7 103 8.2E-25 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 AMK43_RS09075 f40da711dbdc1c3bf25b0940ddeafc96 105 SUPERFAMILY SSF52833 3 105 1.29E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS09075 f40da711dbdc1c3bf25b0940ddeafc96 105 Gene3D G3DSA:3.40.30.10 2 105 1.0E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS09075 f40da711dbdc1c3bf25b0940ddeafc96 105 PANTHER PTHR10438 13 105 1.8E-27 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK43_RS09075 f40da711dbdc1c3bf25b0940ddeafc96 105 PRINTS PR00421 Thioredoxin family signature 69 80 2.9E-7 T 22-04-2016 AMK43_RS09075 f40da711dbdc1c3bf25b0940ddeafc96 105 PRINTS PR00421 Thioredoxin family signature 31 40 2.9E-7 T 22-04-2016 AMK43_RS09075 f40da711dbdc1c3bf25b0940ddeafc96 105 PRINTS PR00421 Thioredoxin family signature 23 31 2.9E-7 T 22-04-2016 AMK43_RS09075 f40da711dbdc1c3bf25b0940ddeafc96 105 ProSitePatterns PS00194 Thioredoxin family active site. 24 42 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AMK43_RS01295 e036c2ca4fe79c6b293fd7a1e9e684a2 129 Gene3D G3DSA:3.90.1030.10 1 129 4.1E-47 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01295 e036c2ca4fe79c6b293fd7a1e9e684a2 129 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01295 e036c2ca4fe79c6b293fd7a1e9e684a2 129 PANTHER PTHR14413:SF5 1 129 5.3E-56 T 22-04-2016 AMK43_RS01295 e036c2ca4fe79c6b293fd7a1e9e684a2 129 Pfam PF01196 Ribosomal protein L17 20 129 2.9E-34 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01295 e036c2ca4fe79c6b293fd7a1e9e684a2 129 PANTHER PTHR14413 1 129 5.3E-56 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01295 e036c2ca4fe79c6b293fd7a1e9e684a2 129 SUPERFAMILY SSF64263 1 129 2.35E-44 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01295 e036c2ca4fe79c6b293fd7a1e9e684a2 129 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 129 27.515 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01295 e036c2ca4fe79c6b293fd7a1e9e684a2 129 TIGRFAM TIGR00059 L17: ribosomal protein bL17 6 129 1.0E-41 T 22-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS10140 c6903f615c55cafaa41e5128bae4ae22 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 6 85 2.1E-14 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS10140 c6903f615c55cafaa41e5128bae4ae22 92 PANTHER PTHR33705 1 92 2.5E-14 T 22-04-2016 AMK43_RS10140 c6903f615c55cafaa41e5128bae4ae22 92 Gene3D G3DSA:3.30.1340.10 6 87 4.1E-17 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS10140 c6903f615c55cafaa41e5128bae4ae22 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 3.7E-9 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS10140 c6903f615c55cafaa41e5128bae4ae22 92 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.7E-9 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS10140 c6903f615c55cafaa41e5128bae4ae22 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 3.7E-9 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS10140 c6903f615c55cafaa41e5128bae4ae22 92 Pfam PF00381 PTS HPr component phosphorylation site 6 85 1.7E-14 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS10140 c6903f615c55cafaa41e5128bae4ae22 92 PANTHER PTHR33705:SF2 1 92 2.5E-14 T 22-04-2016 AMK43_RS10140 c6903f615c55cafaa41e5128bae4ae22 92 SUPERFAMILY SSF55594 6 87 1.83E-14 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS11290 21f7781acc1bf6a1b15519aa64831e17 339 SUPERFAMILY SSF53448 1 268 3.86E-49 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11290 21f7781acc1bf6a1b15519aa64831e17 339 Gene3D G3DSA:3.90.550.10 1 208 9.3E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11290 21f7781acc1bf6a1b15519aa64831e17 339 PANTHER PTHR22916:SF24 1 315 3.1E-49 T 22-04-2016 AMK43_RS11290 21f7781acc1bf6a1b15519aa64831e17 339 PANTHER PTHR22916 1 315 3.1E-49 T 22-04-2016 AMK43_RS11290 21f7781acc1bf6a1b15519aa64831e17 339 Pfam PF00535 Glycosyl transferase family 2 4 138 9.2E-36 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK43_RS02965 ed4351c7dad004298cee79fdf172b602 421 Gene3D G3DSA:3.40.190.10 161 344 3.4E-30 T 22-04-2016 AMK43_RS02965 ed4351c7dad004298cee79fdf172b602 421 Gene3D G3DSA:3.40.190.10 37 160 1.8E-21 T 22-04-2016 AMK43_RS02965 ed4351c7dad004298cee79fdf172b602 421 SUPERFAMILY SSF53850 35 417 2.42E-61 T 22-04-2016 AMK43_RS02965 ed4351c7dad004298cee79fdf172b602 421 Pfam PF13416 Bacterial extracellular solute-binding protein 52 348 1.0E-33 T 22-04-2016 AMK43_RS02965 ed4351c7dad004298cee79fdf172b602 421 PANTHER PTHR30061 1 419 2.8E-47 T 22-04-2016 AMK43_RS11085 f59473cae22c687c7b6e6ee74956d2a7 371 SUPERFAMILY SSF53756 13 371 2.0E-74 T 22-04-2016 AMK43_RS11085 f59473cae22c687c7b6e6ee74956d2a7 371 Gene3D G3DSA:3.40.50.2000 158 350 1.1E-26 T 22-04-2016 AMK43_RS11085 f59473cae22c687c7b6e6ee74956d2a7 371 Pfam PF13439 Glycosyltransferase Family 4 17 175 8.1E-9 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK43_RS11085 f59473cae22c687c7b6e6ee74956d2a7 371 Pfam PF00534 Glycosyl transferases group 1 190 350 1.3E-33 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 AMK43_RS11085 f59473cae22c687c7b6e6ee74956d2a7 371 PANTHER PTHR12526 92 371 1.6E-60 T 22-04-2016 AMK43_RS00470 a805981df241ba0a149a0763b2b82f1a 131 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 131 32.556 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00470 a805981df241ba0a149a0763b2b82f1a 131 Gene3D G3DSA:3.30.1370.30 3 70 1.0E-28 T 22-04-2016 AMK43_RS00470 a805981df241ba0a149a0763b2b82f1a 131 Gene3D G3DSA:3.30.1490.10 75 131 2.4E-30 T 22-04-2016 AMK43_RS00470 a805981df241ba0a149a0763b2b82f1a 131 SUPERFAMILY SSF56047 3 131 1.96E-49 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00470 a805981df241ba0a149a0763b2b82f1a 131 PANTHER PTHR11758 1 131 1.9E-57 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00470 a805981df241ba0a149a0763b2b82f1a 131 Pfam PF00410 Ribosomal protein S8 5 131 7.6E-53 T 22-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 AMK43_RS08550 9bb7b09172ff2744e63c39fbc2c32905 335 PANTHER PTHR28629 1 330 1.1E-129 T 22-04-2016 AMK43_RS08550 9bb7b09172ff2744e63c39fbc2c32905 335 PANTHER PTHR28629:SF2 1 330 1.1E-129 T 22-04-2016 AMK43_RS08550 9bb7b09172ff2744e63c39fbc2c32905 335 Pfam PF02733 Dak1 domain 17 327 4.3E-112 T 22-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 AMK43_RS08550 9bb7b09172ff2744e63c39fbc2c32905 335 Gene3D G3DSA:3.30.1180.20 186 331 6.6E-48 T 22-04-2016 AMK43_RS08550 9bb7b09172ff2744e63c39fbc2c32905 335 SUPERFAMILY SSF82549 10 329 6.02E-107 T 22-04-2016 AMK43_RS08550 9bb7b09172ff2744e63c39fbc2c32905 335 Gene3D G3DSA:3.40.50.10440 11 184 2.0E-60 T 22-04-2016 AMK43_RS06640 d96c6e5a772b3bddead2d8c71f2b86a5 110 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 9 100 1.9E-11 T 22-04-2016 IPR008407 Branched-chain amino acid transport, AzlD AMK43_RS04785 63ad36e51603dfab57f79f629e54c7c8 146 Pfam PF01967 MoaC family 1 136 5.4E-53 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 AMK43_RS04785 63ad36e51603dfab57f79f629e54c7c8 146 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 1 138 1.6E-54 T 22-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 AMK43_RS04785 63ad36e51603dfab57f79f629e54c7c8 146 SUPERFAMILY SSF55040 1 141 1.7E-57 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 AMK43_RS04785 63ad36e51603dfab57f79f629e54c7c8 146 Gene3D G3DSA:3.30.70.640 1 144 1.2E-60 T 22-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 AMK43_RS04785 63ad36e51603dfab57f79f629e54c7c8 146 PANTHER PTHR22960 1 144 3.6E-81 T 22-04-2016 AMK43_RS09900 9eb2e2d517f3fbbd45c14f583462945c 171 Gene3D G3DSA:3.90.45.10 2 163 1.3E-58 T 22-04-2016 IPR023635 Peptide deformylase AMK43_RS09900 9eb2e2d517f3fbbd45c14f583462945c 171 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 1 154 3.8E-49 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK43_RS09900 9eb2e2d517f3fbbd45c14f583462945c 171 PANTHER PTHR10458 1 155 2.5E-63 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK43_RS09900 9eb2e2d517f3fbbd45c14f583462945c 171 Pfam PF01327 Polypeptide deformylase 2 146 7.6E-49 T 22-04-2016 IPR023635 Peptide deformylase AMK43_RS09900 9eb2e2d517f3fbbd45c14f583462945c 171 Hamap MF_00163 Peptide deformylase [def]. 1 157 26.538 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK43_RS09900 9eb2e2d517f3fbbd45c14f583462945c 171 PIRSF PIRSF004749 1 170 1.3E-51 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK43_RS09900 9eb2e2d517f3fbbd45c14f583462945c 171 SUPERFAMILY SSF56420 2 157 1.31E-54 T 22-04-2016 IPR023635 Peptide deformylase AMK43_RS09900 9eb2e2d517f3fbbd45c14f583462945c 171 PRINTS PR01576 Peptide deformylase signature 96 114 3.3E-34 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK43_RS09900 9eb2e2d517f3fbbd45c14f583462945c 171 PRINTS PR01576 Peptide deformylase signature 115 144 3.3E-34 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK43_RS09900 9eb2e2d517f3fbbd45c14f583462945c 171 PRINTS PR01576 Peptide deformylase signature 84 95 3.3E-34 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK43_RS09900 9eb2e2d517f3fbbd45c14f583462945c 171 PRINTS PR01576 Peptide deformylase signature 30 59 3.3E-34 T 22-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 AMK43_RS09475 39edc2d0ffa88eb338234d2f180593ef 250 Gene3D G3DSA:3.40.50.300 1 243 3.6E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09475 39edc2d0ffa88eb338234d2f180593ef 250 SMART SM00382 26 220 8.5E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS09475 39edc2d0ffa88eb338234d2f180593ef 250 SUPERFAMILY SSF52540 2 244 3.72E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09475 39edc2d0ffa88eb338234d2f180593ef 250 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS09475 39edc2d0ffa88eb338234d2f180593ef 250 PANTHER PTHR24220 3 243 3.5E-81 T 22-04-2016 AMK43_RS09475 39edc2d0ffa88eb338234d2f180593ef 250 Pfam PF00005 ABC transporter 17 170 3.4E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS09475 39edc2d0ffa88eb338234d2f180593ef 250 PANTHER PTHR24220:SF535 3 243 3.5E-81 T 22-04-2016 AMK43_RS06125 5143f34be30abf9a017b907a409c1926 112 Pfam PF07883 Cupin domain 43 109 7.9E-14 T 22-04-2016 IPR013096 Cupin 2, conserved barrel AMK43_RS06125 5143f34be30abf9a017b907a409c1926 112 PANTHER PTHR37694 4 111 1.0E-33 T 22-04-2016 AMK43_RS06125 5143f34be30abf9a017b907a409c1926 112 Gene3D G3DSA:2.60.120.10 5 111 3.0E-36 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK43_RS06125 5143f34be30abf9a017b907a409c1926 112 SUPERFAMILY SSF51182 11 110 7.29E-24 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK43_RS05525 4f0d46f2e70ddf5b50e84e98546d7283 286 PANTHER PTHR10120 1 280 2.5E-97 T 22-04-2016 AMK43_RS05525 4f0d46f2e70ddf5b50e84e98546d7283 286 PANTHER PTHR10120:SF19 1 280 2.5E-97 T 22-04-2016 AMK43_RS05525 4f0d46f2e70ddf5b50e84e98546d7283 286 Hamap MF_00188 Protease HtpX [htpX]. 5 279 26.866 T 22-04-2016 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 AMK43_RS05525 4f0d46f2e70ddf5b50e84e98546d7283 286 Pfam PF01435 Peptidase family M48 66 279 2.7E-40 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMK43_RS05525 4f0d46f2e70ddf5b50e84e98546d7283 286 Gene3D G3DSA:3.30.2010.10 58 148 3.8E-35 T 22-04-2016 AMK43_RS06540 e723345b78e6c327107f567c578b3ef6 506 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 506 42.276 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK43_RS06540 e723345b78e6c327107f567c578b3ef6 506 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 506 1.7E-195 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK43_RS06540 e723345b78e6c327107f567c578b3ef6 506 PIRSF PIRSF000414 1 506 3.2E-211 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK43_RS06540 e723345b78e6c327107f567c578b3ef6 506 Gene3D G3DSA:3.40.50.1380 2 185 7.1E-79 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain AMK43_RS06540 e723345b78e6c327107f567c578b3ef6 506 Pfam PF02142 MGS-like domain 14 128 3.6E-25 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain AMK43_RS06540 e723345b78e6c327107f567c578b3ef6 506 SMART SM00851 14 128 1.5E-48 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain AMK43_RS06540 e723345b78e6c327107f567c578b3ef6 506 PANTHER PTHR11692:SF2 1 506 2.2E-282 T 22-04-2016 AMK43_RS06540 e723345b78e6c327107f567c578b3ef6 506 SMART SM00798 133 438 1.5E-177 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK43_RS06540 e723345b78e6c327107f567c578b3ef6 506 PANTHER PTHR11692 1 506 2.2E-282 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK43_RS06540 e723345b78e6c327107f567c578b3ef6 506 Gene3D G3DSA:3.40.140.20 234 349 7.4E-50 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK43_RS06540 e723345b78e6c327107f567c578b3ef6 506 Gene3D G3DSA:3.40.140.20 355 496 1.0E-54 T 22-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK43_RS06540 e723345b78e6c327107f567c578b3ef6 506 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 436 2.6E-114 T 22-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 AMK43_RS06540 e723345b78e6c327107f567c578b3ef6 506 SUPERFAMILY SSF52335 2 191 9.03E-63 T 22-04-2016 IPR011607 Methylglyoxal synthase-like domain AMK43_RS06540 e723345b78e6c327107f567c578b3ef6 506 SUPERFAMILY SSF53927 203 506 4.31E-123 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK43_RS02215 f3dde222e49f4cdfab3250b78936adac 194 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 37 186 1.3E-66 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 AMK43_RS02215 f3dde222e49f4cdfab3250b78936adac 194 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 189 36.435 T 22-04-2016 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478|UniPathway: UPA00041 AMK43_RS02215 f3dde222e49f4cdfab3250b78936adac 194 Pfam PF13580 SIS domain 24 146 2.5E-23 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK43_RS02215 f3dde222e49f4cdfab3250b78936adac 194 PANTHER PTHR30390:SF6 2 194 4.3E-83 T 22-04-2016 AMK43_RS02215 f3dde222e49f4cdfab3250b78936adac 194 SUPERFAMILY SSF53697 23 190 3.71E-45 T 22-04-2016 AMK43_RS02215 f3dde222e49f4cdfab3250b78936adac 194 Gene3D G3DSA:3.40.50.10490 15 190 3.1E-54 T 22-04-2016 AMK43_RS02215 f3dde222e49f4cdfab3250b78936adac 194 PANTHER PTHR30390 2 194 4.3E-83 T 22-04-2016 AMK43_RS01895 57d7e1705cd7513d927bece4996bdf05 338 SMART SM00342 244 328 2.1E-24 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS01895 57d7e1705cd7513d927bece4996bdf05 338 Gene3D G3DSA:1.10.10.60 246 281 5.9E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS01895 57d7e1705cd7513d927bece4996bdf05 338 Pfam PF12833 Helix-turn-helix domain 251 329 1.0E-21 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS01895 57d7e1705cd7513d927bece4996bdf05 338 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 282 324 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK43_RS01895 57d7e1705cd7513d927bece4996bdf05 338 Gene3D G3DSA:1.10.10.60 282 330 1.9E-18 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS01895 57d7e1705cd7513d927bece4996bdf05 338 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 297 312 7.6E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK43_RS01895 57d7e1705cd7513d927bece4996bdf05 338 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 312 328 7.6E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK43_RS01895 57d7e1705cd7513d927bece4996bdf05 338 PANTHER PTHR11019:SF141 74 179 3.3E-32 T 22-04-2016 AMK43_RS01895 57d7e1705cd7513d927bece4996bdf05 338 PANTHER PTHR11019:SF141 200 336 3.3E-32 T 22-04-2016 AMK43_RS01895 57d7e1705cd7513d927bece4996bdf05 338 SUPERFAMILY SSF46689 281 331 7.62E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS01895 57d7e1705cd7513d927bece4996bdf05 338 PANTHER PTHR11019 74 179 3.3E-32 T 22-04-2016 AMK43_RS01895 57d7e1705cd7513d927bece4996bdf05 338 PANTHER PTHR11019 200 336 3.3E-32 T 22-04-2016 AMK43_RS07100 c4bcc230c3ee137d2d98fb394b2f2c63 87 PANTHER PTHR23321 6 86 2.7E-37 T 22-04-2016 AMK43_RS07100 c4bcc230c3ee137d2d98fb394b2f2c63 87 SUPERFAMILY SSF47060 5 87 1.56E-33 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 AMK43_RS07100 c4bcc230c3ee137d2d98fb394b2f2c63 87 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 8 86 3.0E-25 T 22-04-2016 AMK43_RS07100 c4bcc230c3ee137d2d98fb394b2f2c63 87 ProSitePatterns PS00362 Ribosomal protein S15 signature. 37 67 - T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS07100 c4bcc230c3ee137d2d98fb394b2f2c63 87 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 87 21.877 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMK43_RS07100 c4bcc230c3ee137d2d98fb394b2f2c63 87 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 87 2.7E-38 T 22-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMK43_RS07100 c4bcc230c3ee137d2d98fb394b2f2c63 87 Pfam PF00312 Ribosomal protein S15 6 86 5.1E-36 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS07100 c4bcc230c3ee137d2d98fb394b2f2c63 87 Gene3D G3DSA:1.10.287.10 5 87 3.6E-37 T 22-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 AMK43_RS07100 c4bcc230c3ee137d2d98fb394b2f2c63 87 SMART SM01387 6 86 9.1E-50 T 22-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02655 60acb31f53d3804e428381c6b250b5d0 245 PANTHER PTHR14859:SF0 1 242 3.4E-24 T 22-04-2016 AMK43_RS02655 60acb31f53d3804e428381c6b250b5d0 245 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 36 233 5.3E-19 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK43_RS02655 60acb31f53d3804e428381c6b250b5d0 245 SUPERFAMILY SSF56219 1 241 6.28E-32 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK43_RS02655 60acb31f53d3804e428381c6b250b5d0 245 Gene3D G3DSA:3.60.10.10 30 240 9.4E-16 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK43_RS02655 60acb31f53d3804e428381c6b250b5d0 245 PANTHER PTHR14859 1 242 3.4E-24 T 22-04-2016 IPR027317 PGAP2-interacting protein AMK43_RS05315 48d95a173e444394e4c2a513adbc1c11 572 Pfam PF13604 AAA domain 217 368 2.7E-6 T 22-04-2016 AMK43_RS05315 48d95a173e444394e4c2a513adbc1c11 572 Gene3D G3DSA:3.40.50.300 213 392 2.8E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05315 48d95a173e444394e4c2a513adbc1c11 572 Pfam PF13538 UvrD-like helicase C-terminal domain 488 532 9.4E-9 T 22-04-2016 IPR027785 UvrD-like helicase C-terminal domain AMK43_RS05315 48d95a173e444394e4c2a513adbc1c11 572 SUPERFAMILY SSF52540 214 533 1.46E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05315 48d95a173e444394e4c2a513adbc1c11 572 Gene3D G3DSA:3.40.50.300 393 535 5.6E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05315 48d95a173e444394e4c2a513adbc1c11 572 Pfam PF08378 Nuclease-related domain 18 132 3.5E-13 T 22-04-2016 IPR011528 Nuclease-related domain, NERD AMK43_RS04240 69f1f08c65260264fc7e8a00f5585154 309 Pfam PF04085 rod shape-determining protein MreC 138 275 6.7E-27 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 AMK43_RS04240 69f1f08c65260264fc7e8a00f5585154 309 PANTHER PTHR34138:SF1 6 299 3.6E-32 T 22-04-2016 AMK43_RS04240 69f1f08c65260264fc7e8a00f5585154 309 PANTHER PTHR34138 6 299 3.6E-32 T 22-04-2016 AMK43_RS04240 69f1f08c65260264fc7e8a00f5585154 309 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 21 279 2.4E-29 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 AMK43_RS04240 69f1f08c65260264fc7e8a00f5585154 309 PIRSF PIRSF038471 8 289 9.1E-41 T 22-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 AMK43_RS04190 fc7a1ed7674911f167016e5727ea9e46 709 Pfam PF01431 Peptidase family M13 502 705 9.4E-65 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMK43_RS04190 fc7a1ed7674911f167016e5727ea9e46 709 SUPERFAMILY SSF55486 63 709 7.81E-188 T 22-04-2016 AMK43_RS04190 fc7a1ed7674911f167016e5727ea9e46 709 PANTHER PTHR11733 61 709 3.8E-176 T 22-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 AMK43_RS04190 fc7a1ed7674911f167016e5727ea9e46 709 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 534 550 4.0E-23 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMK43_RS04190 fc7a1ed7674911f167016e5727ea9e46 709 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 605 616 4.0E-23 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMK43_RS04190 fc7a1ed7674911f167016e5727ea9e46 709 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 512 524 4.0E-23 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMK43_RS04190 fc7a1ed7674911f167016e5727ea9e46 709 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 494 506 4.0E-23 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMK43_RS04190 fc7a1ed7674911f167016e5727ea9e46 709 PANTHER PTHR11733:SF65 61 709 3.8E-176 T 22-04-2016 AMK43_RS04190 fc7a1ed7674911f167016e5727ea9e46 709 Pfam PF05649 Peptidase family M13 73 449 2.4E-91 T 22-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AMK43_RS04190 fc7a1ed7674911f167016e5727ea9e46 709 Gene3D G3DSA:3.40.390.10 493 709 1.6E-99 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMK43_RS04190 fc7a1ed7674911f167016e5727ea9e46 709 Gene3D G3DSA:3.40.390.10 331 452 1.6E-99 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMK43_RS08100 dad450c7cadf15a42b3efdc7807057ff 162 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 4 160 1.8E-47 T 22-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK43_RS08100 dad450c7cadf15a42b3efdc7807057ff 162 Gene3D G3DSA:3.30.70.260 3 78 2.8E-20 T 22-04-2016 AMK43_RS08100 dad450c7cadf15a42b3efdc7807057ff 162 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 4 60 3.0E-7 T 22-04-2016 AMK43_RS08100 dad450c7cadf15a42b3efdc7807057ff 162 SUPERFAMILY SSF55021 81 161 7.63E-27 T 22-04-2016 AMK43_RS08100 dad450c7cadf15a42b3efdc7807057ff 162 Pfam PF10369 Small subunit of acetolactate synthase 86 159 2.3E-29 T 22-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK43_RS08100 dad450c7cadf15a42b3efdc7807057ff 162 SUPERFAMILY SSF55021 5 77 9.92E-15 T 22-04-2016 AMK43_RS08100 dad450c7cadf15a42b3efdc7807057ff 162 PANTHER PTHR30239 13 161 4.4E-46 T 22-04-2016 AMK43_RS08100 dad450c7cadf15a42b3efdc7807057ff 162 Gene3D G3DSA:3.30.70.1150 86 161 1.6E-31 T 22-04-2016 AMK43_RS08100 dad450c7cadf15a42b3efdc7807057ff 162 Pfam PF13710 ACT domain 14 75 8.2E-17 T 22-04-2016 AMK43_RS03240 08dbfbee685f7f6ad5207e1daec8c0d9 168 Pfam PF00466 Ribosomal protein L10 3 98 7.4E-25 T 22-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 AMK43_RS03240 08dbfbee685f7f6ad5207e1daec8c0d9 168 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 23 144 1.0E-5 T 22-04-2016 AMK43_RS03240 08dbfbee685f7f6ad5207e1daec8c0d9 168 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 161 24.332 T 22-04-2016 IPR022973 Ribosomal protein L10 AMK43_RS03240 08dbfbee685f7f6ad5207e1daec8c0d9 168 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 22-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS03240 08dbfbee685f7f6ad5207e1daec8c0d9 168 SUPERFAMILY SSF160369 4 160 1.27E-45 T 22-04-2016 AMK43_RS03240 08dbfbee685f7f6ad5207e1daec8c0d9 168 PANTHER PTHR11560 1 160 6.1E-38 T 22-04-2016 AMK43_RS02160 55c38c500dd23f690c34841226c20f80 718 PANTHER PTHR11649 260 681 1.8E-239 T 22-04-2016 AMK43_RS02160 55c38c500dd23f690c34841226c20f80 718 PANTHER PTHR11649 3 144 1.8E-239 T 22-04-2016 AMK43_RS02160 55c38c500dd23f690c34841226c20f80 718 Pfam PF07664 Ferrous iron transport protein B C terminus 458 509 5.2E-18 T 22-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 AMK43_RS02160 55c38c500dd23f690c34841226c20f80 718 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 642 1.1E-173 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AMK43_RS02160 55c38c500dd23f690c34841226c20f80 718 Pfam PF02421 Ferrous iron transport protein B 3 155 5.2E-68 T 22-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 AMK43_RS02160 55c38c500dd23f690c34841226c20f80 718 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 156 3.0E-16 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK43_RS02160 55c38c500dd23f690c34841226c20f80 718 Pfam PF07670 Nucleoside recognition 351 442 1.2E-10 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 AMK43_RS02160 55c38c500dd23f690c34841226c20f80 718 Pfam PF07670 Nucleoside recognition 514 645 2.9E-26 T 22-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 AMK43_RS02160 55c38c500dd23f690c34841226c20f80 718 Gene3D G3DSA:3.40.50.300 2 165 7.5E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02160 55c38c500dd23f690c34841226c20f80 718 PANTHER PTHR11649:SF37 260 681 1.8E-239 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AMK43_RS02160 55c38c500dd23f690c34841226c20f80 718 PANTHER PTHR11649:SF37 3 144 1.8E-239 T 22-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 AMK43_RS02160 55c38c500dd23f690c34841226c20f80 718 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.9E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS02160 55c38c500dd23f690c34841226c20f80 718 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.9E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS02160 55c38c500dd23f690c34841226c20f80 718 SUPERFAMILY SSF52540 1 164 5.7E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09315 95ce538277ba1cfce21fc62f641281fe 140 Gene3D G3DSA:3.40.50.360 6 139 5.1E-36 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS09315 95ce538277ba1cfce21fc62f641281fe 140 PANTHER PTHR32145 1 140 6.5E-24 T 22-04-2016 AMK43_RS09315 95ce538277ba1cfce21fc62f641281fe 140 SUPERFAMILY SSF52218 3 139 2.16E-28 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS09315 95ce538277ba1cfce21fc62f641281fe 140 Pfam PF12724 Flavodoxin domain 6 91 7.2E-11 T 22-04-2016 IPR026816 Flavodoxin domain AMK43_RS09315 95ce538277ba1cfce21fc62f641281fe 140 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AMK43_RS09315 95ce538277ba1cfce21fc62f641281fe 140 PANTHER PTHR32145:SF19 1 140 6.5E-24 T 22-04-2016 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 SUPERFAMILY SSF55261 292 420 7.03E-37 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 Gene3D G3DSA:3.30.1360.30 280 414 2.1E-44 T 22-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 SUPERFAMILY SSF55681 405 559 3.53E-100 T 22-04-2016 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 SUPERFAMILY SSF55681 120 314 3.53E-100 T 22-04-2016 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 Pfam PF02938 GAD domain 311 402 1.0E-21 T 22-04-2016 IPR029351 GAD domain AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 2 565 34.573 T 22-04-2016 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 580 3.3E-223 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 520 534 2.1E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 193 205 2.1E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 210 223 2.1E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 PRINTS PR01042 Aspartyl-tRNA synthetase signature 476 492 2.1E-26 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 Gene3D G3DSA:2.40.50.140 2 108 3.5E-33 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 SUPERFAMILY SSF50249 2 110 4.29E-28 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 Pfam PF01336 OB-fold nucleic acid binding domain 19 103 1.6E-13 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 PANTHER PTHR22594 370 573 2.9E-238 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 PANTHER PTHR22594 1 300 2.9E-238 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 PANTHER PTHR22594:SF5 370 573 2.9E-238 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 PANTHER PTHR22594:SF5 1 300 2.9E-238 T 22-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 Pfam PF00152 tRNA synthetases class II (D, K and N) 121 559 2.1E-109 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 Gene3D G3DSA:3.30.930.10 415 580 9.1E-111 T 22-04-2016 AMK43_RS02500 75fa5739d6be9cd9b7e8233a0f3624dd 591 Gene3D G3DSA:3.30.930.10 134 279 9.1E-111 T 22-04-2016 AMK43_RS07685 b34800e6fb62e81fa7875b8184f225b6 400 Gene3D G3DSA:3.40.1160.10 2 244 5.1E-66 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS07685 b34800e6fb62e81fa7875b8184f225b6 400 PANTHER PTHR21499 2 400 7.4E-136 T 22-04-2016 AMK43_RS07685 b34800e6fb62e81fa7875b8184f225b6 400 PANTHER PTHR21499:SF31 2 400 7.4E-136 T 22-04-2016 AMK43_RS07685 b34800e6fb62e81fa7875b8184f225b6 400 Pfam PF13840 ACT domain 337 394 1.3E-7 T 22-04-2016 IPR027795 GATS-like ACT domain AMK43_RS07685 b34800e6fb62e81fa7875b8184f225b6 400 SUPERFAMILY SSF55021 246 327 5.19E-9 T 22-04-2016 AMK43_RS07685 b34800e6fb62e81fa7875b8184f225b6 400 SUPERFAMILY SSF55021 331 399 4.58E-13 T 22-04-2016 AMK43_RS07685 b34800e6fb62e81fa7875b8184f225b6 400 PIRSF PIRSF000726 55 400 2.3E-99 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK43_RS07685 b34800e6fb62e81fa7875b8184f225b6 400 SUPERFAMILY SSF53633 2 240 1.7E-68 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS07685 b34800e6fb62e81fa7875b8184f225b6 400 Pfam PF00696 Amino acid kinase family 2 227 1.3E-50 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS07685 b34800e6fb62e81fa7875b8184f225b6 400 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 2 398 3.4E-111 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK43_RS07685 b34800e6fb62e81fa7875b8184f225b6 400 ProSitePatterns PS00324 Aspartokinase signature. 4 12 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK43_RS00375 ea6f929a4b499e5dc6ab8b60d51a5535 128 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00375 ea6f929a4b499e5dc6ab8b60d51a5535 128 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.913 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK43_RS00375 ea6f929a4b499e5dc6ab8b60d51a5535 128 Pfam PF00164 Ribosomal protein S12/S23 9 122 7.1E-43 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00375 ea6f929a4b499e5dc6ab8b60d51a5535 128 PRINTS PR01034 Ribosomal protein S12 signature 27 42 2.1E-57 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK43_RS00375 ea6f929a4b499e5dc6ab8b60d51a5535 128 PRINTS PR01034 Ribosomal protein S12 signature 94 110 2.1E-57 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK43_RS00375 ea6f929a4b499e5dc6ab8b60d51a5535 128 PRINTS PR01034 Ribosomal protein S12 signature 42 57 2.1E-57 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK43_RS00375 ea6f929a4b499e5dc6ab8b60d51a5535 128 PRINTS PR01034 Ribosomal protein S12 signature 110 122 2.1E-57 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK43_RS00375 ea6f929a4b499e5dc6ab8b60d51a5535 128 PRINTS PR01034 Ribosomal protein S12 signature 58 77 2.1E-57 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK43_RS00375 ea6f929a4b499e5dc6ab8b60d51a5535 128 PRINTS PR01034 Ribosomal protein S12 signature 77 94 2.1E-57 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK43_RS00375 ea6f929a4b499e5dc6ab8b60d51a5535 128 PANTHER PTHR11652 1 116 1.4E-73 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00375 ea6f929a4b499e5dc6ab8b60d51a5535 128 SUPERFAMILY SSF50249 2 123 2.31E-53 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS00375 ea6f929a4b499e5dc6ab8b60d51a5535 128 Gene3D G3DSA:2.40.50.140 1 123 9.4E-65 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS00375 ea6f929a4b499e5dc6ab8b60d51a5535 128 PIRSF PIRSF002133 1 124 2.1E-55 T 22-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00375 ea6f929a4b499e5dc6ab8b60d51a5535 128 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 4.6E-67 T 22-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 AMK43_RS05775 63fb20dfa01b6b7b5b17d6e726b140f1 480 Gene3D G3DSA:1.20.140.10 242 380 3.1E-12 T 22-04-2016 AMK43_RS05775 63fb20dfa01b6b7b5b17d6e726b140f1 480 SUPERFAMILY SSF56645 41 198 5.07E-13 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMK43_RS05775 63fb20dfa01b6b7b5b17d6e726b140f1 480 PANTHER PTHR10909:SF121 15 399 4.5E-12 T 22-04-2016 AMK43_RS05775 63fb20dfa01b6b7b5b17d6e726b140f1 480 PANTHER PTHR10909 15 399 4.5E-12 T 22-04-2016 AMK43_RS05775 63fb20dfa01b6b7b5b17d6e726b140f1 480 Gene3D G3DSA:1.10.540.10 45 124 2.0E-6 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMK43_RS05775 63fb20dfa01b6b7b5b17d6e726b140f1 480 SUPERFAMILY SSF47203 243 377 9.5E-13 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK43_RS05775 63fb20dfa01b6b7b5b17d6e726b140f1 480 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 374 4.9E-9 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK43_RS05775 63fb20dfa01b6b7b5b17d6e726b140f1 480 Gene3D G3DSA:2.40.110.10 127 207 7.6E-4 T 22-04-2016 AMK43_RS03360 28b0230a1aee61b08873fe8bb88fbdfc 169 SUPERFAMILY SSF50346 97 166 2.75E-16 T 22-04-2016 IPR011033 PRC-barrel-like AMK43_RS03360 28b0230a1aee61b08873fe8bb88fbdfc 169 SUPERFAMILY SSF50447 4 91 7.06E-9 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK43_RS03360 28b0230a1aee61b08873fe8bb88fbdfc 169 Gene3D G3DSA:2.40.30.60 2 91 5.7E-11 T 22-04-2016 IPR002676 RimM protein GO:0006364 AMK43_RS03360 28b0230a1aee61b08873fe8bb88fbdfc 169 Gene3D G3DSA:2.30.30.240 97 166 6.7E-19 T 22-04-2016 AMK43_RS03360 28b0230a1aee61b08873fe8bb88fbdfc 169 Pfam PF01782 RimM N-terminal domain 7 87 4.9E-11 T 22-04-2016 IPR002676 RimM protein GO:0006364 AMK43_RS03360 28b0230a1aee61b08873fe8bb88fbdfc 169 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 166 2.7E-38 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMK43_RS03360 28b0230a1aee61b08873fe8bb88fbdfc 169 Pfam PF05239 PRC-barrel domain 94 167 2.2E-8 T 22-04-2016 IPR027275 PRC-barrel domain AMK43_RS03360 28b0230a1aee61b08873fe8bb88fbdfc 169 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 167 21.538 T 22-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 AMK43_RS03360 28b0230a1aee61b08873fe8bb88fbdfc 169 PANTHER PTHR33692 1 169 1.5E-32 T 22-04-2016 AMK43_RS07735 ac15100998a77900d5f86d290d947fcf 414 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 22-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK43_RS07735 ac15100998a77900d5f86d290d947fcf 414 SUPERFAMILY SSF53383 2 412 5.01E-186 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS07735 ac15100998a77900d5f86d290d947fcf 414 Gene3D G3DSA:3.90.1150.10 281 412 6.1E-59 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS07735 ac15100998a77900d5f86d290d947fcf 414 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 412 54.566 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK43_RS07735 ac15100998a77900d5f86d290d947fcf 414 Pfam PF00464 Serine hydroxymethyltransferase 4 381 6.4E-178 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK43_RS07735 ac15100998a77900d5f86d290d947fcf 414 PANTHER PTHR11680 2 411 2.5E-254 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK43_RS07735 ac15100998a77900d5f86d290d947fcf 414 PIRSF PIRSF000412 1 414 4.3E-177 T 22-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 AMK43_RS07735 ac15100998a77900d5f86d290d947fcf 414 Gene3D G3DSA:3.40.640.10 33 280 4.5E-110 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS07280 067600f4a50c9e4187103190819307fa 157 SUPERFAMILY SSF55729 3 146 1.68E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS07280 067600f4a50c9e4187103190819307fa 157 Gene3D G3DSA:3.40.630.30 2 150 1.7E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS07280 067600f4a50c9e4187103190819307fa 157 Pfam PF13302 Acetyltransferase (GNAT) domain 19 141 8.5E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 122 279 2.6E-68 T 22-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 PANTHER PTHR10025 4 281 1.5E-157 T 22-04-2016 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 SUPERFAMILY SSF53223 2 120 2.97E-39 T 22-04-2016 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 254 272 7.5E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 108 129 7.5E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 7.5E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 73 100 7.5E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 7.5E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 237 253 7.5E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 32 54 7.5E-84 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 258 266 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 74 99 - T 22-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 281 37.906 T 22-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 Gene3D G3DSA:3.40.192.10 5 138 6.2E-47 T 22-04-2016 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 Gene3D G3DSA:3.40.50.720 139 262 3.1E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 4 119 1.3E-39 T 22-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 AMK43_RS09885 f4102d9ac2c51bde4ccb30be7499bffd 282 SUPERFAMILY SSF51735 121 277 2.18E-48 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS09760 968fc86268c01c8440b8cc25cbc14249 105 PANTHER PTHR10438 1 105 3.7E-23 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK43_RS09760 968fc86268c01c8440b8cc25cbc14249 105 Gene3D G3DSA:3.40.30.10 1 104 4.6E-29 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS09760 968fc86268c01c8440b8cc25cbc14249 105 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 22-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 AMK43_RS09760 968fc86268c01c8440b8cc25cbc14249 105 SUPERFAMILY SSF52833 2 104 1.45E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS09760 968fc86268c01c8440b8cc25cbc14249 105 Pfam PF00085 Thioredoxin 2 102 3.7E-23 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 AMK43_RS09760 968fc86268c01c8440b8cc25cbc14249 105 PIRSF PIRSF000077 1 104 9.3E-23 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK43_RS01995 9bfab21b8dc370c94fae0f5aaab5bb35 482 PANTHER PTHR32024:SF2 1 482 8.8E-185 T 22-04-2016 AMK43_RS01995 9bfab21b8dc370c94fae0f5aaab5bb35 482 PANTHER PTHR32024 1 482 8.8E-185 T 22-04-2016 AMK43_RS01995 9bfab21b8dc370c94fae0f5aaab5bb35 482 PIRSF PIRSF006247 1 481 2.1E-149 T 22-04-2016 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 AMK43_RS01995 9bfab21b8dc370c94fae0f5aaab5bb35 482 Pfam PF02386 Cation transport protein 45 475 1.7E-47 T 22-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 AMK43_RS00650 90408be6721bf0ac185039ea9c1415cf 304 SUPERFAMILY SSF46785 1 84 5.05E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS00650 90408be6721bf0ac185039ea9c1415cf 304 Pfam PF03466 LysR substrate binding domain 101 298 1.3E-11 T 22-04-2016 IPR005119 LysR, substrate-binding AMK43_RS00650 90408be6721bf0ac185039ea9c1415cf 304 Gene3D G3DSA:1.10.10.10 1 81 5.4E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS00650 90408be6721bf0ac185039ea9c1415cf 304 Gene3D G3DSA:3.40.190.10 185 266 2.9E-7 T 22-04-2016 AMK43_RS00650 90408be6721bf0ac185039ea9c1415cf 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK43_RS00650 90408be6721bf0ac185039ea9c1415cf 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK43_RS00650 90408be6721bf0ac185039ea9c1415cf 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.1E-8 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK43_RS00650 90408be6721bf0ac185039ea9c1415cf 304 SUPERFAMILY SSF53850 86 297 4.52E-24 T 22-04-2016 AMK43_RS00650 90408be6721bf0ac185039ea9c1415cf 304 Gene3D G3DSA:3.40.190.10 105 184 5.7E-6 T 22-04-2016 AMK43_RS00650 90408be6721bf0ac185039ea9c1415cf 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.5E-16 T 22-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 AMK43_RS00650 90408be6721bf0ac185039ea9c1415cf 304 PANTHER PTHR30346:SF0 1 265 6.7E-52 T 22-04-2016 AMK43_RS00650 90408be6721bf0ac185039ea9c1415cf 304 PANTHER PTHR30346 1 265 6.7E-52 T 22-04-2016 AMK43_RS11025 e0d13120fce4dd56c1865fc3459e64ae 958 SUPERFAMILY SSF52540 42 359 3.49E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11025 e0d13120fce4dd56c1865fc3459e64ae 958 SMART SM00490 264 346 1.8E-7 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS11025 e0d13120fce4dd56c1865fc3459e64ae 958 PANTHER PTHR11274 48 109 2.4E-15 T 22-04-2016 AMK43_RS11025 e0d13120fce4dd56c1865fc3459e64ae 958 PANTHER PTHR11274 125 196 2.4E-15 T 22-04-2016 AMK43_RS11025 e0d13120fce4dd56c1865fc3459e64ae 958 Pfam PF00271 Helicase conserved C-terminal domain 254 345 2.0E-9 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS11025 e0d13120fce4dd56c1865fc3459e64ae 958 SMART SM00487 22 221 1.1E-12 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK43_RS11025 e0d13120fce4dd56c1865fc3459e64ae 958 Pfam PF04851 Type III restriction enzyme, res subunit 25 189 1.1E-20 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMK43_RS11025 e0d13120fce4dd56c1865fc3459e64ae 958 Gene3D G3DSA:3.40.50.300 10 195 6.2E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11025 e0d13120fce4dd56c1865fc3459e64ae 958 Gene3D G3DSA:3.40.50.300 253 362 4.6E-14 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02255 b28768c84afc238639df072927633389 218 PANTHER PTHR20842 11 208 2.0E-41 T 22-04-2016 AMK43_RS02255 b28768c84afc238639df072927633389 218 Pfam PF03575 Peptidase family S51 17 207 7.7E-52 T 22-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 AMK43_RS02255 b28768c84afc238639df072927633389 218 SUPERFAMILY SSF52317 8 205 1.83E-25 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS02255 b28768c84afc238639df072927633389 218 Gene3D G3DSA:3.40.50.880 8 217 7.2E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS01620 ebd715f9d8fe8da17b8689715410266d 392 PANTHER PTHR23504 46 384 1.5E-25 T 22-04-2016 AMK43_RS01620 ebd715f9d8fe8da17b8689715410266d 392 Gene3D G3DSA:1.20.1250.20 6 187 8.0E-26 T 22-04-2016 AMK43_RS01620 ebd715f9d8fe8da17b8689715410266d 392 Gene3D G3DSA:1.20.1250.20 215 385 1.3E-14 T 22-04-2016 AMK43_RS01620 ebd715f9d8fe8da17b8689715410266d 392 SUPERFAMILY SSF103473 4 386 8.63E-49 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK43_RS01620 ebd715f9d8fe8da17b8689715410266d 392 Pfam PF07690 Major Facilitator Superfamily 10 353 3.1E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 SUPERFAMILY SSF54211 450 565 6.83E-41 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 PRINTS PR00315 GTP-binding elongation factor signature 11 24 3.3E-9 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 PRINTS PR00315 GTP-binding elongation factor signature 117 126 3.3E-9 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 PRINTS PR00315 GTP-binding elongation factor signature 81 92 3.3E-9 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 PRINTS PR00315 GTP-binding elongation factor signature 65 75 3.3E-9 T 22-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 SMART SM00838 566 654 5.5E-38 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 Gene3D G3DSA:2.40.30.10 274 372 2.5E-21 T 22-04-2016 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 SMART SM00889 448 564 9.7E-64 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 Gene3D G3DSA:3.30.230.10 452 563 4.9E-45 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 SUPERFAMILY SSF54980 566 659 1.92E-26 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 Gene3D G3DSA:3.30.70.240 564 657 4.5E-28 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 Gene3D G3DSA:3.40.50.300 5 268 4.6E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 SUPERFAMILY SSF54980 372 450 2.45E-18 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 PANTHER PTHR23115:SF98 3 164 3.6E-226 T 22-04-2016 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 PANTHER PTHR23115:SF98 237 658 3.6E-226 T 22-04-2016 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 SUPERFAMILY SSF52540 9 263 4.15E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 144 3.6E-14 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 Pfam PF03764 Elongation factor G, domain IV 448 564 4.5E-40 T 22-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 Gene3D G3DSA:3.30.70.870 373 445 2.2E-24 T 22-04-2016 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 PANTHER PTHR23115 3 164 3.6E-226 T 22-04-2016 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 PANTHER PTHR23115 237 658 3.6E-226 T 22-04-2016 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 Pfam PF00009 Elongation factor Tu GTP binding domain 8 263 2.9E-29 T 22-04-2016 AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 Pfam PF00679 Elongation factor G C-terminus 566 653 2.6E-28 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 Pfam PF14492 Elongation Factor G, domain II 372 445 1.8E-24 T 22-04-2016 IPR009022 Elongation factor G, III-V domain AMK43_RS04235 8e638db9c382be0aaa57a2a9da5fa82a 661 SUPERFAMILY SSF50447 247 372 8.08E-20 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK43_RS06260 06bf37b1b748681e57c9d96537c7041e 334 PANTHER PTHR23409 19 320 4.4E-75 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 AMK43_RS06260 06bf37b1b748681e57c9d96537c7041e 334 PIRSF PIRSF000355 1 321 5.5E-74 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 AMK43_RS06260 06bf37b1b748681e57c9d96537c7041e 334 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 6 325 1.1E-136 T 22-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMK43_RS06260 06bf37b1b748681e57c9d96537c7041e 334 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 97 113 - T 22-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 AMK43_RS06260 06bf37b1b748681e57c9d96537c7041e 334 SUPERFAMILY SSF47240 4 325 1.89E-84 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK43_RS06260 06bf37b1b748681e57c9d96537c7041e 334 Pfam PF00268 Ribonucleotide reductase, small chain 9 286 3.9E-78 T 22-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 AMK43_RS06260 06bf37b1b748681e57c9d96537c7041e 334 Gene3D G3DSA:1.10.620.20 4 287 7.1E-74 T 22-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 AMK43_RS03760 0b79b71c6b4178ba36c02b8772d9596a 248 Pfam PF08239 Bacterial SH3 domain 192 243 1.4E-6 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type AMK43_RS01490 162d20858013124784368acfb769d771 138 Pfam PF01475 Ferric uptake regulator family 10 103 5.9E-25 T 22-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 AMK43_RS01490 162d20858013124784368acfb769d771 138 SUPERFAMILY SSF46785 6 130 7.35E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS01490 162d20858013124784368acfb769d771 138 Gene3D G3DSA:1.10.10.10 4 81 7.8E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS01490 162d20858013124784368acfb769d771 138 PANTHER PTHR33202:SF7 6 136 5.6E-35 T 22-04-2016 AMK43_RS01490 162d20858013124784368acfb769d771 138 PANTHER PTHR33202 6 136 5.6E-35 T 22-04-2016 AMK43_RS09670 a6de50ef31cbc9aa3c86f11366b32a5c 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 279 2.5E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09670 a6de50ef31cbc9aa3c86f11366b32a5c 287 Gene3D G3DSA:1.10.3720.10 8 279 2.7E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09670 a6de50ef31cbc9aa3c86f11366b32a5c 287 PANTHER PTHR30425 4 287 2.2E-62 T 22-04-2016 AMK43_RS09670 a6de50ef31cbc9aa3c86f11366b32a5c 287 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 3 274 4.4E-62 T 22-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 AMK43_RS09670 a6de50ef31cbc9aa3c86f11366b32a5c 287 SUPERFAMILY SSF161098 4 277 1.5E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS06600 9b9d649679ba26b2d02aad651f298e8b 65 PRINTS PR00050 Cold shock protein signature 23 32 8.4E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK43_RS06600 9b9d649679ba26b2d02aad651f298e8b 65 PRINTS PR00050 Cold shock protein signature 38 56 8.4E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK43_RS06600 9b9d649679ba26b2d02aad651f298e8b 65 PRINTS PR00050 Cold shock protein signature 3 18 8.4E-17 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK43_RS06600 9b9d649679ba26b2d02aad651f298e8b 65 PIRSF PIRSF002599 1 65 8.8E-22 T 22-04-2016 IPR012156 Cold shock, CspA GO:0003676 AMK43_RS06600 9b9d649679ba26b2d02aad651f298e8b 65 Gene3D G3DSA:2.40.50.140 3 63 4.0E-29 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS06600 9b9d649679ba26b2d02aad651f298e8b 65 SUPERFAMILY SSF50249 2 63 1.68E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS06600 9b9d649679ba26b2d02aad651f298e8b 65 SMART SM00357 2 65 6.8E-26 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 AMK43_RS06600 9b9d649679ba26b2d02aad651f298e8b 65 PANTHER PTHR11544 3 63 1.9E-27 T 22-04-2016 AMK43_RS06600 9b9d649679ba26b2d02aad651f298e8b 65 Pfam PF00313 'Cold-shock' DNA-binding domain 3 64 2.6E-27 T 22-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 SUPERFAMILY SSF55874 288 450 2.1E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 SUPERFAMILY SSF47384 215 299 4.51E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 Gene3D G3DSA:1.10.287.130 222 284 6.8E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 PANTHER PTHR24423 171 449 4.6E-73 T 22-04-2016 AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 PANTHER PTHR24423 1 14 4.6E-73 T 22-04-2016 AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 SMART SM00304 177 231 1.2E-6 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 Pfam PF00672 HAMP domain 158 227 1.3E-12 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 SMART SM00387 343 453 6.0E-29 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 298 1.4E-11 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 Gene3D G3DSA:3.30.565.10 285 452 1.3E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 343 452 4.0E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 SUPERFAMILY SSF158472 180 229 6.02E-8 T 22-04-2016 AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 SMART SM00388 232 298 2.8E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 2.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 2.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 2.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS09635 af35ecbe73dadf82c36b75a01b9378e2 454 PRINTS PR00344 Bacterial sensor protein C-terminal signature 437 450 2.5E-11 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS00430 8664730858101fcbe4dc33b6d521dab9 218 SMART SM00322 61 126 2.3E-4 T 22-04-2016 IPR004087 K Homology domain GO:0003676 AMK43_RS00430 8664730858101fcbe4dc33b6d521dab9 218 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 211 2.7E-87 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMK43_RS00430 8664730858101fcbe4dc33b6d521dab9 218 PANTHER PTHR11760 2 214 7.5E-122 T 22-04-2016 AMK43_RS00430 8664730858101fcbe4dc33b6d521dab9 218 SUPERFAMILY SSF54821 108 207 9.55E-37 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK43_RS00430 8664730858101fcbe4dc33b6d521dab9 218 SUPERFAMILY SSF54814 2 107 2.28E-34 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMK43_RS00430 8664730858101fcbe4dc33b6d521dab9 218 Gene3D G3DSA:3.30.300.20 17 108 8.0E-30 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta AMK43_RS00430 8664730858101fcbe4dc33b6d521dab9 218 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 207 36.643 T 22-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 AMK43_RS00430 8664730858101fcbe4dc33b6d521dab9 218 Gene3D G3DSA:3.30.1140.32 109 208 4.0E-41 T 22-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK43_RS00430 8664730858101fcbe4dc33b6d521dab9 218 Pfam PF07650 KH domain 38 111 2.2E-16 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 AMK43_RS00430 8664730858101fcbe4dc33b6d521dab9 218 PANTHER PTHR11760:SF19 2 214 7.5E-122 T 22-04-2016 AMK43_RS00430 8664730858101fcbe4dc33b6d521dab9 218 Pfam PF00189 Ribosomal protein S3, C-terminal domain 121 203 1.7E-35 T 22-04-2016 AMK43_RS00430 8664730858101fcbe4dc33b6d521dab9 218 ProSitePatterns PS00548 Ribosomal protein S3 signature. 164 198 - T 22-04-2016 IPR018280 Ribosomal protein S3, conserved site AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 Pfam PF02272 DHHA1 domain 796 861 1.0E-12 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 648 690 3.8E-17 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 SMART SM00863 648 691 1.5E-18 T 22-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 SUPERFAMILY SSF55186 547 705 8.76E-48 T 22-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 195 206 8.5E-27 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 69 80 8.5E-27 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 222 235 8.5E-27 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 269 285 8.5E-27 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 PRINTS PR00980 Alanyl-tRNA synthetase signature 293 306 8.5E-27 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 SUPERFAMILY SSF55681 2 241 7.21E-94 T 22-04-2016 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 Pfam PF01411 tRNA synthetases class II (A) 5 548 7.2E-185 T 22-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 848 2.8E-280 T 22-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 SUPERFAMILY SSF101353 242 463 5.23E-58 T 22-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 SUPERFAMILY SSF50447 454 536 1.27E-15 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 PANTHER PTHR11777 1 870 0.0 T 22-04-2016 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 Gene3D G3DSA:3.30.980.10 558 622 8.7E-5 T 22-04-2016 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 PANTHER PTHR11777:SF9 1 870 0.0 T 22-04-2016 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 Gene3D G3DSA:3.30.930.10 1 237 7.9E-101 T 22-04-2016 AMK43_RS07935 d13f14c039c9b00655875b6756c38050 870 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 869 158.741 T 22-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 AMK43_RS07750 d8e773e588bddd053b78d56a5f800f89 284 Pfam PF01171 PP-loop family 56 217 8.5E-15 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AMK43_RS07750 d8e773e588bddd053b78d56a5f800f89 284 SUPERFAMILY SSF52402 42 263 2.21E-40 T 22-04-2016 AMK43_RS07750 d8e773e588bddd053b78d56a5f800f89 284 PANTHER PTHR11807:SF16 23 272 9.7E-74 T 22-04-2016 AMK43_RS07750 d8e773e588bddd053b78d56a5f800f89 284 PANTHER PTHR11807 23 272 9.7E-74 T 22-04-2016 AMK43_RS07750 d8e773e588bddd053b78d56a5f800f89 284 Gene3D G3DSA:3.40.50.620 44 217 1.8E-15 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS07750 d8e773e588bddd053b78d56a5f800f89 284 PIRSF PIRSF004976 5 284 3.3E-65 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 AMK43_RS05745 528275de39e892ce8131d3081ae6e371 133 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 22-04-2016 IPR019823 Large-conductance mechanosensitive channel, conserved site AMK43_RS05745 528275de39e892ce8131d3081ae6e371 133 PANTHER PTHR30266 3 133 1.7E-47 T 22-04-2016 AMK43_RS05745 528275de39e892ce8131d3081ae6e371 133 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 133 26.159 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK43_RS05745 528275de39e892ce8131d3081ae6e371 133 SUPERFAMILY SSF81330 13 127 1.96E-34 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK43_RS05745 528275de39e892ce8131d3081ae6e371 133 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.1E-11 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK43_RS05745 528275de39e892ce8131d3081ae6e371 133 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 1.1E-11 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK43_RS05745 528275de39e892ce8131d3081ae6e371 133 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 1.1E-11 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK43_RS05745 528275de39e892ce8131d3081ae6e371 133 PANTHER PTHR30266:SF2 3 133 1.7E-47 T 22-04-2016 AMK43_RS05745 528275de39e892ce8131d3081ae6e371 133 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 133 4.4E-46 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK43_RS05745 528275de39e892ce8131d3081ae6e371 133 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 3 130 3.6E-45 T 22-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 AMK43_RS08545 eef593b5f396fb33c40b4fc3a517327c 209 SMART SM01120 30 204 6.7E-42 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 AMK43_RS08545 eef593b5f396fb33c40b4fc3a517327c 209 SUPERFAMILY SSF101473 3 206 4.58E-43 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 AMK43_RS08545 eef593b5f396fb33c40b4fc3a517327c 209 PANTHER PTHR28629 1 208 6.6E-38 T 22-04-2016 AMK43_RS08545 eef593b5f396fb33c40b4fc3a517327c 209 Pfam PF02734 DAK2 domain 31 203 4.7E-40 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 AMK43_RS02840 068e0d18d68a5f2616f149d8e41ca336 404 PIRSF PIRSF001491 2 404 2.8E-110 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AMK43_RS02840 068e0d18d68a5f2616f149d8e41ca336 404 Gene3D G3DSA:3.40.720.10 235 403 3.3E-61 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK43_RS02840 068e0d18d68a5f2616f149d8e41ca336 404 Gene3D G3DSA:3.40.720.10 4 102 3.3E-61 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK43_RS02840 068e0d18d68a5f2616f149d8e41ca336 404 PANTHER PTHR21110:SF0 237 404 3.1E-75 T 22-04-2016 AMK43_RS02840 068e0d18d68a5f2616f149d8e41ca336 404 PANTHER PTHR21110:SF0 4 214 3.1E-75 T 22-04-2016 AMK43_RS02840 068e0d18d68a5f2616f149d8e41ca336 404 PANTHER PTHR21110 237 404 3.1E-75 T 22-04-2016 AMK43_RS02840 068e0d18d68a5f2616f149d8e41ca336 404 PANTHER PTHR21110 4 214 3.1E-75 T 22-04-2016 AMK43_RS02840 068e0d18d68a5f2616f149d8e41ca336 404 Pfam PF01676 Metalloenzyme superfamily 5 391 8.8E-39 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AMK43_RS02840 068e0d18d68a5f2616f149d8e41ca336 404 SUPERFAMILY SSF53649 4 102 1.83E-58 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMK43_RS02840 068e0d18d68a5f2616f149d8e41ca336 404 SUPERFAMILY SSF53649 232 403 1.83E-58 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMK43_RS04340 168619d4676aba486376e6ee3f2a88be 1033 Gene3D G3DSA:3.20.20.80 668 701 8.9E-79 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS04340 168619d4676aba486376e6ee3f2a88be 1033 Gene3D G3DSA:3.20.20.80 313 614 8.9E-79 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS04340 168619d4676aba486376e6ee3f2a88be 1033 SUPERFAMILY SSF49899 718 941 4.38E-15 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMK43_RS04340 168619d4676aba486376e6ee3f2a88be 1033 SUPERFAMILY SSF49899 989 1030 4.38E-15 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMK43_RS04340 168619d4676aba486376e6ee3f2a88be 1033 Gene3D G3DSA:2.60.120.200 988 1032 2.2E-20 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMK43_RS04340 168619d4676aba486376e6ee3f2a88be 1033 Gene3D G3DSA:2.60.120.200 718 943 2.2E-20 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMK43_RS04340 168619d4676aba486376e6ee3f2a88be 1033 PANTHER PTHR12631:SF4 329 605 7.3E-31 T 22-04-2016 AMK43_RS04340 168619d4676aba486376e6ee3f2a88be 1033 Pfam PF02449 Beta-galactosidase 329 464 7.8E-6 T 22-04-2016 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK43_RS04340 168619d4676aba486376e6ee3f2a88be 1033 SUPERFAMILY SSF51445 314 624 1.66E-39 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS04340 168619d4676aba486376e6ee3f2a88be 1033 PANTHER PTHR12631 329 605 7.3E-31 T 22-04-2016 AMK43_RS06210 0060397215e4dd126f34e6d5dda93885 367 PANTHER PTHR30372:SF0 1 367 9.6E-61 T 22-04-2016 AMK43_RS06210 0060397215e4dd126f34e6d5dda93885 367 PANTHER PTHR30372 1 367 9.6E-61 T 22-04-2016 AMK43_RS06210 0060397215e4dd126f34e6d5dda93885 367 Pfam PF02684 Lipid-A-disaccharide synthetase 7 348 2.4E-71 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 AMK43_RS06210 0060397215e4dd126f34e6d5dda93885 367 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 6 349 3.7E-61 T 22-04-2016 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00359 AMK43_RS06210 0060397215e4dd126f34e6d5dda93885 367 SUPERFAMILY SSF53756 5 288 1.46E-11 T 22-04-2016 AMK43_RS01870 bdca6bbeda2fca98ebca8140c79f5be5 504 SUPERFAMILY SSF52540 10 236 1.0E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01870 bdca6bbeda2fca98ebca8140c79f5be5 504 PANTHER PTHR24220 13 386 2.8E-239 T 22-04-2016 AMK43_RS01870 bdca6bbeda2fca98ebca8140c79f5be5 504 Pfam PF00005 ABC transporter 278 432 2.5E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS01870 bdca6bbeda2fca98ebca8140c79f5be5 504 Pfam PF00005 ABC transporter 27 176 5.3E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS01870 bdca6bbeda2fca98ebca8140c79f5be5 504 ProSitePatterns PS00211 ABC transporters family signature. 405 419 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS01870 bdca6bbeda2fca98ebca8140c79f5be5 504 SMART SM00382 286 481 0.26 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS01870 bdca6bbeda2fca98ebca8140c79f5be5 504 SMART SM00382 36 223 5.4E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS01870 bdca6bbeda2fca98ebca8140c79f5be5 504 PANTHER PTHR24220:SF303 13 386 2.8E-239 T 22-04-2016 AMK43_RS01870 bdca6bbeda2fca98ebca8140c79f5be5 504 Gene3D G3DSA:3.40.50.300 9 239 6.9E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01870 bdca6bbeda2fca98ebca8140c79f5be5 504 Gene3D G3DSA:3.40.50.300 260 500 4.4E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01870 bdca6bbeda2fca98ebca8140c79f5be5 504 SUPERFAMILY SSF52540 250 491 3.62E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04635 37dbd24efeffb42cfb3fa92a39774e45 365 Pfam PF01546 Peptidase family M20/M25/M40 57 359 4.1E-27 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK43_RS04635 37dbd24efeffb42cfb3fa92a39774e45 365 PIRSF PIRSF005962 1 365 8.7E-121 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 AMK43_RS04635 37dbd24efeffb42cfb3fa92a39774e45 365 SUPERFAMILY SSF53187 1 181 1.91E-73 T 22-04-2016 AMK43_RS04635 37dbd24efeffb42cfb3fa92a39774e45 365 SUPERFAMILY SSF53187 282 359 1.91E-73 T 22-04-2016 AMK43_RS04635 37dbd24efeffb42cfb3fa92a39774e45 365 Gene3D G3DSA:3.30.70.360 165 279 9.7E-36 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS04635 37dbd24efeffb42cfb3fa92a39774e45 365 Gene3D G3DSA:3.40.630.10 280 364 8.7E-86 T 22-04-2016 AMK43_RS04635 37dbd24efeffb42cfb3fa92a39774e45 365 Gene3D G3DSA:3.40.630.10 1 162 8.7E-86 T 22-04-2016 AMK43_RS04635 37dbd24efeffb42cfb3fa92a39774e45 365 SUPERFAMILY SSF55031 168 275 3.4E-28 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS04635 37dbd24efeffb42cfb3fa92a39774e45 365 PANTHER PTHR11014:SF107 3 365 8.0E-160 T 22-04-2016 AMK43_RS04635 37dbd24efeffb42cfb3fa92a39774e45 365 PANTHER PTHR11014 3 365 8.0E-160 T 22-04-2016 AMK43_RS04635 37dbd24efeffb42cfb3fa92a39774e45 365 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 1 348 8.9E-113 T 22-04-2016 IPR017439 Amidohydrolase GO:0016787 AMK43_RS04635 37dbd24efeffb42cfb3fa92a39774e45 365 Pfam PF07687 Peptidase dimerisation domain 169 264 7.1E-10 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS04025 2b8b05ec080d044cb45a348dc1be370e 184 Gene3D G3DSA:3.40.630.30 9 159 3.9E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS04025 2b8b05ec080d044cb45a348dc1be370e 184 SUPERFAMILY SSF55729 10 162 1.97E-34 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS04025 2b8b05ec080d044cb45a348dc1be370e 184 PANTHER PTHR23091:SF279 1 164 2.2E-68 T 22-04-2016 AMK43_RS04025 2b8b05ec080d044cb45a348dc1be370e 184 Pfam PF13302 Acetyltransferase (GNAT) domain 16 158 1.9E-25 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS04025 2b8b05ec080d044cb45a348dc1be370e 184 PANTHER PTHR23091 1 164 2.2E-68 T 22-04-2016 AMK43_RS01030 73a0eb5a2cd7b95f4f6cfa4b1f536674 223 PANTHER PTHR21098:SF0 1 223 1.1E-89 T 22-04-2016 AMK43_RS01030 73a0eb5a2cd7b95f4f6cfa4b1f536674 223 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 207 2.4E-63 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK43_RS01030 73a0eb5a2cd7b95f4f6cfa4b1f536674 223 SUPERFAMILY SSF63380 1 87 4.17E-23 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AMK43_RS01030 73a0eb5a2cd7b95f4f6cfa4b1f536674 223 PIRSF PIRSF000498 1 216 3.8E-65 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK43_RS01030 73a0eb5a2cd7b95f4f6cfa4b1f536674 223 SUPERFAMILY SSF63380 93 201 8.5E-25 T 22-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 AMK43_RS01030 73a0eb5a2cd7b95f4f6cfa4b1f536674 223 PANTHER PTHR21098 1 223 1.1E-89 T 22-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK43_RS01030 73a0eb5a2cd7b95f4f6cfa4b1f536674 223 Pfam PF00677 Lumazine binding domain 3 85 2.1E-20 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK43_RS01030 73a0eb5a2cd7b95f4f6cfa4b1f536674 223 Pfam PF00677 Lumazine binding domain 100 188 1.8E-17 T 22-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 AMK43_RS01030 73a0eb5a2cd7b95f4f6cfa4b1f536674 223 Gene3D G3DSA:2.40.30.20 6 104 2.9E-28 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS01030 73a0eb5a2cd7b95f4f6cfa4b1f536674 223 Gene3D G3DSA:2.40.30.20 105 200 9.3E-24 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS00560 ed7b618848bedeeb98690a365154047b 228 PANTHER PTHR21600:SF2 1 228 3.0E-69 T 22-04-2016 AMK43_RS00560 ed7b618848bedeeb98690a365154047b 228 SUPERFAMILY SSF55174 1 88 1.06E-14 T 22-04-2016 AMK43_RS00560 ed7b618848bedeeb98690a365154047b 228 PANTHER PTHR21600 1 228 3.0E-69 T 22-04-2016 AMK43_RS00560 ed7b618848bedeeb98690a365154047b 228 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 97 111 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMK43_RS00560 ed7b618848bedeeb98690a365154047b 228 SMART SM00363 1 58 6.0E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS00560 ed7b618848bedeeb98690a365154047b 228 Gene3D G3DSA:3.10.290.10 1 61 4.0E-22 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS00560 ed7b618848bedeeb98690a365154047b 228 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 219 3.2E-42 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMK43_RS00560 ed7b618848bedeeb98690a365154047b 228 Pfam PF00849 RNA pseudouridylate synthase 61 187 2.0E-17 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS00560 ed7b618848bedeeb98690a365154047b 228 SUPERFAMILY SSF55120 60 224 1.46E-37 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS00560 ed7b618848bedeeb98690a365154047b 228 Pfam PF01479 S4 domain 1 46 1.5E-10 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS01990 167f497446f08651e56300170f61ec32 452 SUPERFAMILY SSF51735 231 364 7.88E-23 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS01990 167f497446f08651e56300170f61ec32 452 PANTHER PTHR13789:SF225 1 450 6.0E-35 T 22-04-2016 AMK43_RS01990 167f497446f08651e56300170f61ec32 452 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 6.1E-12 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMK43_RS01990 167f497446f08651e56300170f61ec32 452 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 6.1E-12 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMK43_RS01990 167f497446f08651e56300170f61ec32 452 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 6.1E-12 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMK43_RS01990 167f497446f08651e56300170f61ec32 452 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 6.1E-12 T 22-04-2016 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 AMK43_RS01990 167f497446f08651e56300170f61ec32 452 SUPERFAMILY SSF51735 1 146 2.58E-30 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS01990 167f497446f08651e56300170f61ec32 452 Gene3D G3DSA:3.30.70.1450 151 223 3.0E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK43_RS01990 167f497446f08651e56300170f61ec32 452 Pfam PF02254 TrkA-N domain 3 122 1.2E-24 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMK43_RS01990 167f497446f08651e56300170f61ec32 452 Pfam PF02254 TrkA-N domain 232 339 2.0E-20 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMK43_RS01990 167f497446f08651e56300170f61ec32 452 SUPERFAMILY SSF116726 373 450 2.35E-10 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK43_RS01990 167f497446f08651e56300170f61ec32 452 Pfam PF02080 TrkA-C domain 153 221 4.7E-13 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK43_RS01990 167f497446f08651e56300170f61ec32 452 Pfam PF02080 TrkA-C domain 386 451 8.7E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK43_RS01990 167f497446f08651e56300170f61ec32 452 Gene3D G3DSA:3.40.50.720 231 362 2.4E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS01990 167f497446f08651e56300170f61ec32 452 Gene3D G3DSA:3.40.50.720 1 148 1.1E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS01990 167f497446f08651e56300170f61ec32 452 PANTHER PTHR13789 1 450 6.0E-35 T 22-04-2016 AMK43_RS01990 167f497446f08651e56300170f61ec32 452 Gene3D G3DSA:3.30.70.1450 387 451 6.3E-6 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK43_RS01990 167f497446f08651e56300170f61ec32 452 SUPERFAMILY SSF116726 134 222 7.32E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK43_RS08965 2ec43bd278fc79892b1523a6d1c48e8e 563 PANTHER PTHR31632:SF4 299 552 1.6E-56 T 22-04-2016 AMK43_RS08965 2ec43bd278fc79892b1523a6d1c48e8e 563 PANTHER PTHR31632 299 552 1.6E-56 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 AMK43_RS08965 2ec43bd278fc79892b1523a6d1c48e8e 563 Pfam PF03239 Iron permease FTR1 family 296 429 2.4E-14 T 22-04-2016 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 AMK43_RS00070 0778a9d78a4be925f8fb7af4883273bf 357 SUPERFAMILY SSF141986 208 339 4.97E-16 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain AMK43_RS00070 0778a9d78a4be925f8fb7af4883273bf 357 PANTHER PTHR30237 1 230 1.9E-115 T 22-04-2016 AMK43_RS00070 0778a9d78a4be925f8fb7af4883273bf 357 PANTHER PTHR30237 246 357 1.9E-115 T 22-04-2016 AMK43_RS00070 0778a9d78a4be925f8fb7af4883273bf 357 SUPERFAMILY SSF52317 1 162 3.66E-36 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS00070 0778a9d78a4be925f8fb7af4883273bf 357 PIRSF PIRSF028757 1 355 7.5E-53 T 22-04-2016 IPR003507 Peptidase family S66 AMK43_RS00070 0778a9d78a4be925f8fb7af4883273bf 357 Gene3D G3DSA:3.50.30.60 207 341 1.1E-24 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain AMK43_RS00070 0778a9d78a4be925f8fb7af4883273bf 357 Gene3D G3DSA:3.40.50.10740 1 175 7.0E-39 T 22-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain AMK43_RS00070 0778a9d78a4be925f8fb7af4883273bf 357 PANTHER PTHR30237:SF4 1 230 1.9E-115 T 22-04-2016 AMK43_RS00070 0778a9d78a4be925f8fb7af4883273bf 357 PANTHER PTHR30237:SF4 246 357 1.9E-115 T 22-04-2016 AMK43_RS00070 0778a9d78a4be925f8fb7af4883273bf 357 Pfam PF02016 LD-carboxypeptidase 13 339 1.0E-56 T 22-04-2016 IPR003507 Peptidase family S66 AMK43_RS01495 2576dbf2f31066619ccb069a90f5181c 165 Gene3D G3DSA:1.20.1260.10 2 163 3.5E-54 T 22-04-2016 IPR012347 Ferritin-related AMK43_RS01495 2576dbf2f31066619ccb069a90f5181c 165 PANTHER PTHR11431:SF4 4 161 2.0E-39 T 22-04-2016 AMK43_RS01495 2576dbf2f31066619ccb069a90f5181c 165 Pfam PF00210 Ferritin-like domain 9 144 1.6E-40 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMK43_RS01495 2576dbf2f31066619ccb069a90f5181c 165 PANTHER PTHR11431 4 161 2.0E-39 T 22-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 AMK43_RS01495 2576dbf2f31066619ccb069a90f5181c 165 SUPERFAMILY SSF47240 3 163 1.83E-51 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK43_RS04685 fc71e328005d61a88a17c59cba35cfdb 68 SUPERFAMILY SSF143034 2 62 4.45E-20 T 22-04-2016 AMK43_RS04685 fc71e328005d61a88a17c59cba35cfdb 68 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 16.734 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK43_RS04685 fc71e328005d61a88a17c59cba35cfdb 68 PRINTS PR00064 Ribosomal protein L35 signature 21 35 3.0E-16 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK43_RS04685 fc71e328005d61a88a17c59cba35cfdb 68 PRINTS PR00064 Ribosomal protein L35 signature 3 20 3.0E-16 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK43_RS04685 fc71e328005d61a88a17c59cba35cfdb 68 PRINTS PR00064 Ribosomal protein L35 signature 36 54 3.0E-16 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK43_RS04685 fc71e328005d61a88a17c59cba35cfdb 68 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 4.7E-22 T 22-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 AMK43_RS04685 fc71e328005d61a88a17c59cba35cfdb 68 Pfam PF01632 Ribosomal protein L35 2 62 5.9E-23 T 22-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS04685 fc71e328005d61a88a17c59cba35cfdb 68 PANTHER PTHR33343 1 62 1.2E-21 T 22-04-2016 AMK43_RS08410 00967f51599e67c160d776e4ed20aa3a 199 SUPERFAMILY SSF55729 13 181 2.16E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS08410 00967f51599e67c160d776e4ed20aa3a 199 Gene3D G3DSA:3.40.630.30 14 183 1.5E-36 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS08410 00967f51599e67c160d776e4ed20aa3a 199 Pfam PF13302 Acetyltransferase (GNAT) domain 19 156 1.6E-16 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS08410 00967f51599e67c160d776e4ed20aa3a 199 PANTHER PTHR13256 13 187 1.6E-37 T 22-04-2016 AMK43_RS05005 4685e7310943bdfc2d814fb4ef0ffa81 424 Gene3D G3DSA:3.20.20.140 74 390 2.7E-82 T 22-04-2016 AMK43_RS05005 4685e7310943bdfc2d814fb4ef0ffa81 424 SUPERFAMILY SSF51338 349 420 5.04E-23 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS05005 4685e7310943bdfc2d814fb4ef0ffa81 424 SUPERFAMILY SSF51338 9 59 5.04E-23 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS05005 4685e7310943bdfc2d814fb4ef0ffa81 424 SUPERFAMILY SSF51556 60 349 3.54E-76 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK43_RS05005 4685e7310943bdfc2d814fb4ef0ffa81 424 ProSitePatterns PS00483 Dihydroorotase signature 2. 288 299 - T 22-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS05005 4685e7310943bdfc2d814fb4ef0ffa81 424 PANTHER PTHR11647 21 421 1.3E-100 T 22-04-2016 AMK43_RS05005 4685e7310943bdfc2d814fb4ef0ffa81 424 Gene3D G3DSA:2.30.40.10 10 73 4.2E-16 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS05005 4685e7310943bdfc2d814fb4ef0ffa81 424 Pfam PF01979 Amidohydrolase family 56 404 5.0E-30 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK43_RS05005 4685e7310943bdfc2d814fb4ef0ffa81 424 PANTHER PTHR11647:SF1 21 421 1.3E-100 T 22-04-2016 AMK43_RS08315 5943c617c6b4f4a7945da5ee4bfa756e 308 PANTHER PTHR11624 1 307 2.0E-153 T 22-04-2016 IPR033247 Transketolase family AMK43_RS08315 5943c617c6b4f4a7945da5ee4bfa756e 308 SMART SM00861 4 169 1.1E-58 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK43_RS08315 5943c617c6b4f4a7945da5ee4bfa756e 308 Gene3D G3DSA:3.40.50.970 2 180 6.2E-65 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS08315 5943c617c6b4f4a7945da5ee4bfa756e 308 SUPERFAMILY SSF52922 174 306 1.44E-37 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK43_RS08315 5943c617c6b4f4a7945da5ee4bfa756e 308 SUPERFAMILY SSF52518 3 170 1.86E-59 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS08315 5943c617c6b4f4a7945da5ee4bfa756e 308 Pfam PF02780 Transketolase, C-terminal domain 180 300 2.5E-33 T 22-04-2016 IPR033248 Transketolase, C-terminal domain AMK43_RS08315 5943c617c6b4f4a7945da5ee4bfa756e 308 Gene3D G3DSA:3.40.50.920 181 305 2.0E-38 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK43_RS08315 5943c617c6b4f4a7945da5ee4bfa756e 308 PANTHER PTHR11624:SF86 1 307 2.0E-153 T 22-04-2016 AMK43_RS08315 5943c617c6b4f4a7945da5ee4bfa756e 308 Pfam PF02779 Transketolase, pyrimidine binding domain 3 168 5.4E-42 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK43_RS03245 901fc60f6581a0e95bf595cb66c41805 123 Gene3D G3DSA:3.30.1390.10 52 123 7.8E-31 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMK43_RS03245 901fc60f6581a0e95bf595cb66c41805 123 SUPERFAMILY SSF48300 4 59 3.4E-15 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS03245 901fc60f6581a0e95bf595cb66c41805 123 Gene3D G3DSA:1.20.5.710 2 51 1.6E-18 T 22-04-2016 AMK43_RS03245 901fc60f6581a0e95bf595cb66c41805 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 89 3.0E-7 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 AMK43_RS03245 901fc60f6581a0e95bf595cb66c41805 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 2.1E-28 T 22-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 AMK43_RS03245 901fc60f6581a0e95bf595cb66c41805 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 23.966 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS03245 901fc60f6581a0e95bf595cb66c41805 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 3.5E-16 T 22-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS03245 901fc60f6581a0e95bf595cb66c41805 123 SUPERFAMILY SSF54736 52 123 1.13E-22 T 22-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like AMK43_RS03245 901fc60f6581a0e95bf595cb66c41805 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 8.7E-43 T 22-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS03870 8897c52602e671571862c795537f2d08 483 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 16 472 2.2E-152 T 22-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 AMK43_RS03870 8897c52602e671571862c795537f2d08 483 Gene3D G3DSA:1.10.860.10 16 117 4.8E-28 T 22-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal AMK43_RS03870 8897c52602e671571862c795537f2d08 483 Pfam PF00772 DnaB-like helicase N terminal domain 16 116 8.3E-27 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AMK43_RS03870 8897c52602e671571862c795537f2d08 483 Gene3D G3DSA:3.40.50.300 177 472 7.2E-90 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03870 8897c52602e671571862c795537f2d08 483 SUPERFAMILY SSF48024 15 125 3.4E-29 T 22-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 AMK43_RS03870 8897c52602e671571862c795537f2d08 483 PANTHER PTHR30153 433 481 2.4E-168 T 22-04-2016 AMK43_RS03870 8897c52602e671571862c795537f2d08 483 PANTHER PTHR30153 1 406 2.4E-168 T 22-04-2016 AMK43_RS03870 8897c52602e671571862c795537f2d08 483 Pfam PF03796 DnaB-like helicase C terminal domain 190 471 1.5E-99 T 22-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 AMK43_RS03870 8897c52602e671571862c795537f2d08 483 SUPERFAMILY SSF52540 188 402 4.26E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03870 8897c52602e671571862c795537f2d08 483 SUPERFAMILY SSF52540 436 463 4.26E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07185 428b5fb6e9527402bc688aaded603d64 175 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 22-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 AMK43_RS07185 428b5fb6e9527402bc688aaded603d64 175 SUPERFAMILY SSF47928 2 105 1.7E-19 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain AMK43_RS07185 428b5fb6e9527402bc688aaded603d64 175 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 175 15.736 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK43_RS07185 428b5fb6e9527402bc688aaded603d64 175 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 173 1.1E-40 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK43_RS07185 428b5fb6e9527402bc688aaded603d64 175 PRINTS PR00125 ATP synthase delta subunit signature 150 168 9.1E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK43_RS07185 428b5fb6e9527402bc688aaded603d64 175 PRINTS PR00125 ATP synthase delta subunit signature 74 85 9.1E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK43_RS07185 428b5fb6e9527402bc688aaded603d64 175 PRINTS PR00125 ATP synthase delta subunit signature 135 150 9.1E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK43_RS07185 428b5fb6e9527402bc688aaded603d64 175 PRINTS PR00125 ATP synthase delta subunit signature 6 25 9.1E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK43_RS07185 428b5fb6e9527402bc688aaded603d64 175 PRINTS PR00125 ATP synthase delta subunit signature 85 99 9.1E-24 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK43_RS07185 428b5fb6e9527402bc688aaded603d64 175 PANTHER PTHR11910 6 175 5.2E-37 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK43_RS07185 428b5fb6e9527402bc688aaded603d64 175 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 173 7.0E-43 T 22-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 AMK43_RS07185 428b5fb6e9527402bc688aaded603d64 175 Gene3D G3DSA:1.10.520.20 4 105 7.8E-18 T 22-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 7.4E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 7.4E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 7.4E-33 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 PANTHER PTHR11655:SF14 1 177 1.1E-90 T 22-04-2016 AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 Gene3D G3DSA:3.90.930.12 83 177 9.1E-40 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 Pfam PF00347 Ribosomal protein L6 90 164 7.0E-20 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 Pfam PF00347 Ribosomal protein L6 11 82 8.6E-18 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 Gene3D G3DSA:3.90.930.12 2 82 1.5E-31 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 SUPERFAMILY SSF56053 1 82 8.38E-27 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 SUPERFAMILY SSF56053 83 177 4.71E-37 T 22-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 22-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 38.585 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 PIRSF PIRSF002162 1 177 6.2E-50 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.2E-77 T 22-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00475 25c019efade77c91ad0be8fcca8162f0 177 PANTHER PTHR11655 1 177 1.1E-90 T 22-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS10040 d55e6fc4de2dc8e335fbf0fde7d76e94 551 Gene3D G3DSA:3.30.450.20 183 272 1.4E-7 T 22-04-2016 AMK43_RS10040 d55e6fc4de2dc8e335fbf0fde7d76e94 551 SUPERFAMILY SSF55874 414 549 3.54E-14 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS10040 d55e6fc4de2dc8e335fbf0fde7d76e94 551 SMART SM00387 451 551 6.8E-4 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS10040 d55e6fc4de2dc8e335fbf0fde7d76e94 551 PANTHER PTHR34220 7 551 1.0E-75 T 22-04-2016 AMK43_RS10040 d55e6fc4de2dc8e335fbf0fde7d76e94 551 Pfam PF06580 Histidine kinase 358 436 3.2E-24 T 22-04-2016 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 AMK43_RS10040 d55e6fc4de2dc8e335fbf0fde7d76e94 551 PANTHER PTHR34220:SF3 7 551 1.0E-75 T 22-04-2016 AMK43_RS10040 d55e6fc4de2dc8e335fbf0fde7d76e94 551 Gene3D G3DSA:3.30.565.10 408 550 5.5E-16 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS10040 d55e6fc4de2dc8e335fbf0fde7d76e94 551 Pfam PF00672 HAMP domain 285 351 5.9E-8 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK43_RS10040 d55e6fc4de2dc8e335fbf0fde7d76e94 551 Pfam PF02743 Cache domain 47 264 2.0E-26 T 22-04-2016 IPR033479 Double Cache domain 1 AMK43_RS10040 d55e6fc4de2dc8e335fbf0fde7d76e94 551 Gene3D G3DSA:3.30.450.20 87 182 1.5E-8 T 22-04-2016 AMK43_RS06830 ed8a7510ea8750b14b7a6ba567c4400d 701 Gene3D G3DSA:3.30.590.10 189 392 7.5E-82 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 AMK43_RS06830 ed8a7510ea8750b14b7a6ba567c4400d 701 Gene3D G3DSA:3.30.590.10 435 569 7.5E-82 T 22-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 AMK43_RS06830 ed8a7510ea8750b14b7a6ba567c4400d 701 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 313 328 - T 22-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK43_RS06830 ed8a7510ea8750b14b7a6ba567c4400d 701 Pfam PF00120 Glutamine synthetase, catalytic domain 183 372 2.0E-20 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK43_RS06830 ed8a7510ea8750b14b7a6ba567c4400d 701 SUPERFAMILY SSF55931 159 392 4.32E-71 T 22-04-2016 AMK43_RS06830 ed8a7510ea8750b14b7a6ba567c4400d 701 SUPERFAMILY SSF55931 435 549 4.32E-71 T 22-04-2016 AMK43_RS06830 ed8a7510ea8750b14b7a6ba567c4400d 701 Pfam PF12437 Glutamine synthetase type III N terminal 5 166 1.3E-68 T 22-04-2016 IPR022147 Glutamine synthetase type III N-terminal GO:0004356 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK43_RS06830 ed8a7510ea8750b14b7a6ba567c4400d 701 SMART SM01230 168 453 7.1E-45 T 22-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 AMK43_RS06830 ed8a7510ea8750b14b7a6ba567c4400d 701 PANTHER PTHR20852 193 402 3.6E-70 T 22-04-2016 AMK43_RS06830 ed8a7510ea8750b14b7a6ba567c4400d 701 PANTHER PTHR20852:SF14 193 402 3.6E-70 T 22-04-2016 AMK43_RS02315 0f868e8fa7bfc0a6628ad271340fbfae 116 SUPERFAMILY SSF50104 4 116 1.4E-45 T 22-04-2016 IPR008991 Translation protein SH3-like domain AMK43_RS02315 0f868e8fa7bfc0a6628ad271340fbfae 116 Pfam PF01245 Ribosomal protein L19 5 113 3.1E-48 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02315 0f868e8fa7bfc0a6628ad271340fbfae 116 PANTHER PTHR15680 4 116 6.1E-49 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02315 0f868e8fa7bfc0a6628ad271340fbfae 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 4 114 5.9E-45 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02315 0f868e8fa7bfc0a6628ad271340fbfae 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 115 29.4 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02315 0f868e8fa7bfc0a6628ad271340fbfae 116 PIRSF PIRSF002191 1 116 2.4E-47 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02315 0f868e8fa7bfc0a6628ad271340fbfae 116 PRINTS PR00061 Ribosomal protein L19 signature 5 34 6.2E-41 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02315 0f868e8fa7bfc0a6628ad271340fbfae 116 PRINTS PR00061 Ribosomal protein L19 signature 35 64 6.2E-41 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02315 0f868e8fa7bfc0a6628ad271340fbfae 116 PRINTS PR00061 Ribosomal protein L19 signature 89 114 6.2E-41 T 22-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02315 0f868e8fa7bfc0a6628ad271340fbfae 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 87 102 - T 22-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS08830 8f92e491aefcd374e624eaa975d797c7 340 SUPERFAMILY SSF111337 1 339 1.05E-132 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK43_RS08830 8f92e491aefcd374e624eaa975d797c7 340 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 340 44.779 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK43_RS08830 8f92e491aefcd374e624eaa975d797c7 340 PANTHER PTHR30307:SF0 2 340 4.3E-167 T 22-04-2016 AMK43_RS08830 8f92e491aefcd374e624eaa975d797c7 340 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 339 6.8E-130 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK43_RS08830 8f92e491aefcd374e624eaa975d797c7 340 Gene3D G3DSA:3.40.1780.10 1 62 9.8E-98 T 22-04-2016 AMK43_RS08830 8f92e491aefcd374e624eaa975d797c7 340 Gene3D G3DSA:3.40.1780.10 177 339 9.8E-98 T 22-04-2016 AMK43_RS08830 8f92e491aefcd374e624eaa975d797c7 340 Gene3D G3DSA:2.40.10.240 64 143 2.7E-28 T 22-04-2016 AMK43_RS08830 8f92e491aefcd374e624eaa975d797c7 340 Pfam PF02547 Queuosine biosynthesis protein 5 339 7.1E-139 T 22-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK43_RS08830 8f92e491aefcd374e624eaa975d797c7 340 PANTHER PTHR30307 2 340 4.3E-167 T 22-04-2016 AMK43_RS02800 0b7594b6115e8f1a393ad4437f9954a4 307 Gene3D G3DSA:3.40.190.10 79 214 3.5E-46 T 22-04-2016 AMK43_RS02800 0b7594b6115e8f1a393ad4437f9954a4 307 Pfam PF14502 Helix-turn-helix domain 30 76 8.5E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02800 0b7594b6115e8f1a393ad4437f9954a4 307 Pfam PF14503 YhfZ C-terminal domain 81 307 6.3E-75 T 22-04-2016 IPR032791 Uncharacterised protein YhfZ, C-terminal domain AMK43_RS02800 0b7594b6115e8f1a393ad4437f9954a4 307 SUPERFAMILY SSF46785 9 80 2.13E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02800 0b7594b6115e8f1a393ad4437f9954a4 307 Gene3D G3DSA:1.10.10.10 7 78 1.5E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02800 0b7594b6115e8f1a393ad4437f9954a4 307 SUPERFAMILY SSF53850 79 307 6.98E-71 T 22-04-2016 AMK43_RS06545 1e76214f3f908e7a4407394d78c63f79 195 SUPERFAMILY SSF53328 6 194 5.23E-47 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK43_RS06545 1e76214f3f908e7a4407394d78c63f79 195 PANTHER PTHR10520 5 195 1.4E-83 T 22-04-2016 AMK43_RS06545 1e76214f3f908e7a4407394d78c63f79 195 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 6 194 7.2E-58 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 AMK43_RS06545 1e76214f3f908e7a4407394d78c63f79 195 Gene3D G3DSA:3.40.50.170 5 194 1.0E-55 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK43_RS06545 1e76214f3f908e7a4407394d78c63f79 195 Pfam PF00551 Formyl transferase 6 187 7.2E-48 T 22-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 AMK43_RS06545 1e76214f3f908e7a4407394d78c63f79 195 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 7 195 28.384 T 22-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 AMK43_RS05545 56892cb8a982ded7e4c709860b0d10e4 2376 SUPERFAMILY SSF103515 2063 2373 1.06E-21 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS05545 56892cb8a982ded7e4c709860b0d10e4 2376 Gene3D G3DSA:2.40.128.130 2058 2373 1.5E-27 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS05545 56892cb8a982ded7e4c709860b0d10e4 2376 Pfam PF03797 Autotransporter beta-domain 2094 2362 6.3E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS05545 56892cb8a982ded7e4c709860b0d10e4 2376 SMART SM00869 2093 2368 2.2E-8 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS08595 af3082e8a75c8e56d5829192fc8a5612 324 PANTHER PTHR32332 3 324 1.1E-75 T 22-04-2016 AMK43_RS08595 af3082e8a75c8e56d5829192fc8a5612 324 Pfam PF03060 Nitronate monooxygenase 4 320 4.4E-63 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMK43_RS08595 af3082e8a75c8e56d5829192fc8a5612 324 PANTHER PTHR32332:SF20 3 324 1.1E-75 T 22-04-2016 AMK43_RS08595 af3082e8a75c8e56d5829192fc8a5612 324 SUPERFAMILY SSF51412 4 323 2.75E-53 T 22-04-2016 AMK43_RS08595 af3082e8a75c8e56d5829192fc8a5612 324 Gene3D G3DSA:3.20.20.70 3 316 1.2E-58 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS06200 a1d1213c51fa27e96373fd3b7794375f 206 PANTHER PTHR30309:SF0 1 201 5.8E-72 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK43_RS06200 a1d1213c51fa27e96373fd3b7794375f 206 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 193 9.6E-55 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK43_RS06200 a1d1213c51fa27e96373fd3b7794375f 206 SMART SM01207 8 194 1.5E-84 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK43_RS06200 a1d1213c51fa27e96373fd3b7794375f 206 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 202 20.587 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK43_RS06200 a1d1213c51fa27e96373fd3b7794375f 206 PANTHER PTHR30309 1 201 5.8E-72 T 22-04-2016 AMK43_RS06200 a1d1213c51fa27e96373fd3b7794375f 206 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 4 202 4.7E-58 T 22-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 AMK43_RS03880 eec42f0d98141718fff216474a812683 224 SMART SM00448 3 113 2.1E-44 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS03880 eec42f0d98141718fff216474a812683 224 PANTHER PTHR26402:SF50 3 223 3.2E-90 T 22-04-2016 AMK43_RS03880 eec42f0d98141718fff216474a812683 224 Gene3D G3DSA:3.40.50.2300 3 124 3.2E-42 T 22-04-2016 AMK43_RS03880 eec42f0d98141718fff216474a812683 224 Pfam PF00072 Response regulator receiver domain 5 114 3.5E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS03880 eec42f0d98141718fff216474a812683 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 223 1.2E-22 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK43_RS03880 eec42f0d98141718fff216474a812683 224 SUPERFAMILY SSF46894 126 223 3.12E-28 T 22-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 AMK43_RS03880 eec42f0d98141718fff216474a812683 224 SUPERFAMILY SSF52172 3 125 1.31E-42 T 22-04-2016 IPR011006 CheY-like superfamily AMK43_RS03880 eec42f0d98141718fff216474a812683 224 PANTHER PTHR26402 3 223 3.2E-90 T 22-04-2016 AMK43_RS03880 eec42f0d98141718fff216474a812683 224 SMART SM00862 148 223 1.1E-20 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK43_RS03880 eec42f0d98141718fff216474a812683 224 Gene3D G3DSA:1.10.10.10 127 223 3.0E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02730 616ff524fe5caf175749e196160f7ee5 124 Pfam PF04343 Protein of unknown function, DUF488 6 116 2.5E-24 T 22-04-2016 IPR007438 Protein of unknown function DUF488 AMK43_RS02730 616ff524fe5caf175749e196160f7ee5 124 PANTHER PTHR36849 1 122 5.1E-38 T 22-04-2016 AMK43_RS02730 616ff524fe5caf175749e196160f7ee5 124 PANTHER PTHR36849:SF1 1 122 5.1E-38 T 22-04-2016 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 PANTHER PTHR24096:SF193 19 511 2.1E-127 T 22-04-2016 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 Gene3D G3DSA:3.30.300.30 413 539 5.5E-6 T 22-04-2016 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 Gene3D G3DSA:2.30.38.10 345 404 3.6E-22 T 22-04-2016 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 Pfam PF01553 Acyltransferase 654 771 2.4E-16 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 SUPERFAMILY SSF69593 643 821 2.48E-22 T 22-04-2016 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 PANTHER PTHR24096 19 511 2.1E-127 T 22-04-2016 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 Pfam PF00501 AMP-binding enzyme 5 414 1.3E-88 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 Gene3D G3DSA:1.10.1200.10 540 606 2.2E-14 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 SUPERFAMILY SSF56801 285 531 9.03E-99 T 22-04-2016 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 SUPERFAMILY SSF56801 4 255 9.03E-99 T 22-04-2016 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 Gene3D G3DSA:3.40.50.980 5 155 2.2E-26 T 22-04-2016 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 Pfam PF00550 Phosphopantetheine attachment site 537 599 2.4E-8 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 Gene3D G3DSA:3.40.1130.10 628 815 2.5E-26 T 22-04-2016 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 SUPERFAMILY SSF47336 528 603 2.22E-11 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 Gene3D G3DSA:3.40.50.980 282 344 2.6E-33 T 22-04-2016 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 Gene3D G3DSA:3.40.50.980 156 250 2.6E-33 T 22-04-2016 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 SMART SM00563 661 777 1.6E-15 T 22-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 AMK43_RS07845 ea4e1a77c10af14a1a10b35ea58b424c 825 ProSitePatterns PS00455 Putative AMP-binding domain signature. 150 161 - T 22-04-2016 IPR020845 AMP-binding, conserved site AMK43_RS07965 5466e78fd940f516ddb67a42e286c558 315 Pfam PF03547 Membrane transport protein 7 153 1.7E-16 T 22-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 AMK43_RS07965 5466e78fd940f516ddb67a42e286c558 315 Pfam PF01758 Sodium Bile acid symporter family 231 314 9.6E-9 T 22-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 AMK43_RS07965 5466e78fd940f516ddb67a42e286c558 315 PANTHER PTHR36838 2 315 2.4E-33 T 22-04-2016 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 PIRSF PIRSF001529 1 423 1.9E-184 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 Gene3D G3DSA:1.10.287.40 1 104 4.4E-25 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 416 4.1E-171 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 SUPERFAMILY SSF46589 1 112 7.85E-27 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 PANTHER PTHR11778 1 422 8.8E-212 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 Gene3D G3DSA:3.30.930.10 105 419 2.0E-141 T 22-04-2016 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 SUPERFAMILY SSF55681 116 420 1.87E-101 T 22-04-2016 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 421 41.994 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 105 1.9E-27 T 22-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 221 399 1.6E-35 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 3.7E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 3.7E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 3.7E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 3.7E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK43_RS06800 31ebb985479a20c7311f1819e97b6556 423 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 3.7E-31 T 22-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 AMK43_RS00905 fd627d0a3f37ad9f42fbe3924585fb53 177 SUPERFAMILY SSF160379 1 176 4.84E-50 T 22-04-2016 AMK43_RS00905 fd627d0a3f37ad9f42fbe3924585fb53 177 Gene3D G3DSA:3.30.70.1280 1 84 3.8E-27 T 22-04-2016 AMK43_RS00905 fd627d0a3f37ad9f42fbe3924585fb53 177 Gene3D G3DSA:3.30.70.1260 87 176 6.2E-36 T 22-04-2016 AMK43_RS00905 fd627d0a3f37ad9f42fbe3924585fb53 177 PANTHER PTHR36439:SF1 1 177 5.0E-33 T 22-04-2016 AMK43_RS00905 fd627d0a3f37ad9f42fbe3924585fb53 177 Pfam PF08002 Protein of unknown function (DUF1697) 1 134 6.7E-32 T 22-04-2016 IPR012545 Protein of unknown function DUF1697 AMK43_RS00905 fd627d0a3f37ad9f42fbe3924585fb53 177 PANTHER PTHR36439 1 177 5.0E-33 T 22-04-2016 AMK43_RS00905 fd627d0a3f37ad9f42fbe3924585fb53 177 PIRSF PIRSF008502 1 177 1.2E-30 T 22-04-2016 IPR012545 Protein of unknown function DUF1697 AMK43_RS01720 d686cc2f3c2620cc2eec6789df2f67ab 128 PANTHER PTHR36113 2 127 2.2E-52 T 22-04-2016 AMK43_RS01720 d686cc2f3c2620cc2eec6789df2f67ab 128 PANTHER PTHR36113:SF1 2 127 2.2E-52 T 22-04-2016 AMK43_RS01720 d686cc2f3c2620cc2eec6789df2f67ab 128 Gene3D G3DSA:3.10.180.10 1 127 9.3E-36 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK43_RS01720 d686cc2f3c2620cc2eec6789df2f67ab 128 SUPERFAMILY SSF54593 1 128 1.06E-25 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK43_RS01720 d686cc2f3c2620cc2eec6789df2f67ab 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 126 3.0E-15 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK43_RS01010 00e4cb160cb1d80dd9264b9639983095 313 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 221 305 1.3E-5 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK43_RS01010 00e4cb160cb1d80dd9264b9639983095 313 PANTHER PTHR13748 1 307 7.3E-53 T 22-04-2016 AMK43_RS01010 00e4cb160cb1d80dd9264b9639983095 313 SUPERFAMILY SSF90002 221 305 8.89E-9 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK43_RS01010 00e4cb160cb1d80dd9264b9639983095 313 SUPERFAMILY SSF52540 2 187 4.98E-16 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01010 00e4cb160cb1d80dd9264b9639983095 313 Gene3D G3DSA:3.30.1220.10 217 305 2.0E-5 T 22-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal AMK43_RS01010 00e4cb160cb1d80dd9264b9639983095 313 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 3 184 2.5E-32 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMK43_RS01010 00e4cb160cb1d80dd9264b9639983095 313 PANTHER PTHR13748:SF10 1 307 7.3E-53 T 22-04-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 AMK43_RS01010 00e4cb160cb1d80dd9264b9639983095 313 Gene3D G3DSA:3.40.50.300 1 196 9.0E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10305 afa8cc1532ee56154d12cb6a97b8500b 325 SUPERFAMILY SSF63829 129 250 2.68E-5 T 22-04-2016 AMK43_RS03495 3b58b397fbab71c7b735360abf0560e4 349 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 5 349 5.0E-152 T 22-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 AMK43_RS03495 3b58b397fbab71c7b735360abf0560e4 349 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 3 349 2.5E-170 T 22-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 AMK43_RS05175 b9a9790da88e84dc1e897bef82802196 184 PANTHER PTHR11019:SF4 4 183 9.9E-58 T 22-04-2016 AMK43_RS05175 b9a9790da88e84dc1e897bef82802196 184 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 179 2.7E-51 T 22-04-2016 IPR006287 DJ-1 AMK43_RS05175 b9a9790da88e84dc1e897bef82802196 184 PANTHER PTHR11019 4 183 9.9E-58 T 22-04-2016 AMK43_RS05175 b9a9790da88e84dc1e897bef82802196 184 Pfam PF01965 DJ-1/PfpI family 4 167 2.1E-44 T 22-04-2016 IPR002818 DJ-1/PfpI AMK43_RS05175 b9a9790da88e84dc1e897bef82802196 184 Gene3D G3DSA:3.40.50.880 4 183 1.1E-56 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS05175 b9a9790da88e84dc1e897bef82802196 184 SUPERFAMILY SSF52317 4 183 3.57E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS09105 cf5f6a135a5b6ee8dea153405eeff0a9 134 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 3 131 4.0E-29 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 AMK43_RS09105 cf5f6a135a5b6ee8dea153405eeff0a9 134 PANTHER PTHR11078 1 131 8.9E-25 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 AMK43_RS09105 cf5f6a135a5b6ee8dea153405eeff0a9 134 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 1 133 18.991 T 22-04-2016 IPR011605 NusB antitermination factor GO:0006353 AMK43_RS09105 cf5f6a135a5b6ee8dea153405eeff0a9 134 Pfam PF01029 NusB family 5 130 5.5E-24 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK43_RS09105 cf5f6a135a5b6ee8dea153405eeff0a9 134 Gene3D G3DSA:1.10.940.10 1 131 1.6E-31 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK43_RS09105 cf5f6a135a5b6ee8dea153405eeff0a9 134 SUPERFAMILY SSF48013 2 131 1.83E-27 T 22-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 AMK43_RS08320 7ff74da4e2474db1db37c2dff6fda721 269 PANTHER PTHR11624 2 269 5.6E-127 T 22-04-2016 IPR033247 Transketolase family AMK43_RS08320 7ff74da4e2474db1db37c2dff6fda721 269 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 266 5.6E-65 T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK43_RS08320 7ff74da4e2474db1db37c2dff6fda721 269 SUPERFAMILY SSF52518 3 268 1.85E-96 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS08320 7ff74da4e2474db1db37c2dff6fda721 269 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 22-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK43_RS08320 7ff74da4e2474db1db37c2dff6fda721 269 PANTHER PTHR11624:SF86 2 269 5.6E-127 T 22-04-2016 AMK43_RS08320 7ff74da4e2474db1db37c2dff6fda721 269 Gene3D G3DSA:3.40.50.970 2 269 1.3E-115 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS00325 bebcfbc416bcc4f020cd4bbf52a804d2 136 Hamap MF_00984 Single-stranded DNA-binding protein. 1 101 30.32 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMK43_RS00325 bebcfbc416bcc4f020cd4bbf52a804d2 136 PIRSF PIRSF002070 1 136 2.7E-36 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMK43_RS00325 bebcfbc416bcc4f020cd4bbf52a804d2 136 PANTHER PTHR10302 1 135 1.5E-34 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMK43_RS00325 bebcfbc416bcc4f020cd4bbf52a804d2 136 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 121 1.6E-32 T 22-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 AMK43_RS00325 bebcfbc416bcc4f020cd4bbf52a804d2 136 Gene3D G3DSA:2.40.50.140 1 136 3.5E-40 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS00325 bebcfbc416bcc4f020cd4bbf52a804d2 136 Pfam PF00436 Single-strand binding protein family 1 96 2.6E-31 T 22-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 AMK43_RS00325 bebcfbc416bcc4f020cd4bbf52a804d2 136 SUPERFAMILY SSF50249 1 136 5.43E-44 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS00055 a638565806f0be98ddfc641e2a797ac4 149 SUPERFAMILY SSF56300 1 131 3.1E-33 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS00055 a638565806f0be98ddfc641e2a797ac4 149 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 131 8.1E-27 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 AMK43_RS00055 a638565806f0be98ddfc641e2a797ac4 149 PANTHER PTHR11124:SF14 1 134 1.0E-32 T 22-04-2016 AMK43_RS00055 a638565806f0be98ddfc641e2a797ac4 149 PANTHER PTHR11124 1 134 1.0E-32 T 22-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 AMK43_RS00055 a638565806f0be98ddfc641e2a797ac4 149 Gene3D G3DSA:3.60.21.10 1 131 9.2E-31 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS00055 a638565806f0be98ddfc641e2a797ac4 149 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 135 1.7E-25 T 22-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type AMK43_RS03355 489f77d2b4c1cc91b3c6b4d537f27006 137 Pfam PF03610 PTS system fructose IIA component 10 112 1.7E-17 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMK43_RS03355 489f77d2b4c1cc91b3c6b4d537f27006 137 Gene3D G3DSA:3.40.50.510 8 134 2.0E-30 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMK43_RS03355 489f77d2b4c1cc91b3c6b4d537f27006 137 PANTHER PTHR38594:SF1 7 137 3.0E-22 T 22-04-2016 AMK43_RS03355 489f77d2b4c1cc91b3c6b4d537f27006 137 SUPERFAMILY SSF53062 9 132 7.06E-25 T 22-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 AMK43_RS03355 489f77d2b4c1cc91b3c6b4d537f27006 137 PANTHER PTHR38594 7 137 3.0E-22 T 22-04-2016 AMK43_RS10465 37d44c76561a0a3d6b0d7254606d3824 104 Gene3D G3DSA:3.40.50.2300 3 102 1.5E-38 T 22-04-2016 AMK43_RS10465 37d44c76561a0a3d6b0d7254606d3824 104 PANTHER PTHR30505 3 102 1.6E-35 T 22-04-2016 AMK43_RS10465 37d44c76561a0a3d6b0d7254606d3824 104 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 6 89 2.0E-28 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 AMK43_RS10465 37d44c76561a0a3d6b0d7254606d3824 104 SUPERFAMILY SSF52794 4 102 2.62E-33 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS10465 37d44c76561a0a3d6b0d7254606d3824 104 PANTHER PTHR30505:SF0 3 102 1.6E-35 T 22-04-2016 AMK43_RS10465 37d44c76561a0a3d6b0d7254606d3824 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 7 98 8.9E-18 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS07025 06d9b7de28a17cf3a2e45807021dbeb3 189 Pfam PF07273 Protein of unknown function (DUF1439) 47 172 1.9E-10 T 22-04-2016 IPR010835 Protein of unknown function DUF1439 AMK43_RS03680 738144ab785c6328f9f962156a59fc77 164 Pfam PF14526 Integron-associated effector binding protein 4 163 1.9E-29 T 22-04-2016 IPR029441 Integron-associated effector binding protein AMK43_RS03680 738144ab785c6328f9f962156a59fc77 164 SMART SM00871 1 164 1.3E-21 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding AMK43_RS03680 738144ab785c6328f9f962156a59fc77 164 Gene3D G3DSA:3.20.80.10 1 164 4.4E-43 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain AMK43_RS03680 738144ab785c6328f9f962156a59fc77 164 PANTHER PTHR36444 1 161 4.8E-18 T 22-04-2016 AMK43_RS03680 738144ab785c6328f9f962156a59fc77 164 SUPERFAMILY SSF55136 1 160 8.89E-18 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain AMK43_RS03420 70563bb99826b81e8981681b5b4d6b7a 505 SUPERFAMILY SSF161098 13 198 7.41E-40 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS03420 70563bb99826b81e8981681b5b4d6b7a 505 Gene3D G3DSA:1.10.3720.10 9 198 1.1E-31 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS03420 70563bb99826b81e8981681b5b4d6b7a 505 PANTHER PTHR30177 266 503 1.3E-215 T 22-04-2016 AMK43_RS03420 70563bb99826b81e8981681b5b4d6b7a 505 PANTHER PTHR30177 1 202 1.3E-215 T 22-04-2016 AMK43_RS03420 70563bb99826b81e8981681b5b4d6b7a 505 PANTHER PTHR30177:SF4 266 503 1.3E-215 T 22-04-2016 AMK43_RS03420 70563bb99826b81e8981681b5b4d6b7a 505 PANTHER PTHR30177:SF4 1 202 1.3E-215 T 22-04-2016 AMK43_RS03420 70563bb99826b81e8981681b5b4d6b7a 505 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 209 8.0E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS03420 70563bb99826b81e8981681b5b4d6b7a 505 Gene3D G3DSA:3.40.190.120 343 441 1.7E-38 T 22-04-2016 AMK43_RS03420 70563bb99826b81e8981681b5b4d6b7a 505 Gene3D G3DSA:3.40.190.10 453 504 4.8E-59 T 22-04-2016 AMK43_RS03420 70563bb99826b81e8981681b5b4d6b7a 505 Gene3D G3DSA:3.40.190.10 232 342 4.8E-59 T 22-04-2016 AMK43_RS03420 70563bb99826b81e8981681b5b4d6b7a 505 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 235 498 1.5E-62 T 22-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 AMK43_RS03420 70563bb99826b81e8981681b5b4d6b7a 505 SUPERFAMILY SSF53850 235 502 2.28E-67 T 22-04-2016 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 SMART SM00433 34 653 0.0 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 660 3.7E-287 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 Gene3D G3DSA:3.30.230.10 222 416 7.2E-64 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 SUPERFAMILY SSF54211 223 416 2.85E-52 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 Pfam PF01751 Toprim domain 444 555 8.0E-18 T 22-04-2016 IPR006171 Toprim domain AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 ProSitePatterns PS00177 DNA topoisomerase II signature. 447 455 - T 22-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 Gene3D G3DSA:3.30.565.10 5 212 2.2E-88 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PANTHER PTHR10169 266 660 3.1E-284 T 22-04-2016 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PANTHER PTHR10169 1 237 3.1E-284 T 22-04-2016 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 660 86.473 T 22-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR00418 DNA topoisomerase II family signature 511 527 1.3E-72 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR00418 DNA topoisomerase II family signature 549 561 1.3E-72 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR00418 DNA topoisomerase II family signature 34 49 1.3E-72 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR00418 DNA topoisomerase II family signature 529 546 1.3E-72 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR00418 DNA topoisomerase II family signature 592 608 1.3E-72 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR00418 DNA topoisomerase II family signature 293 306 1.3E-72 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR00418 DNA topoisomerase II family signature 111 125 1.3E-72 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR00418 DNA topoisomerase II family signature 69 82 1.3E-72 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR00418 DNA topoisomerase II family signature 445 459 1.3E-72 T 22-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 SUPERFAMILY SSF56719 419 652 2.38E-88 T 22-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 174 6.1E-23 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 Gene3D G3DSA:3.40.50.670 429 642 3.9E-96 T 22-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 588 649 9.2E-31 T 22-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 Pfam PF00204 DNA gyrase B 223 415 2.6E-59 T 22-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 SUPERFAMILY SSF55874 5 211 1.57E-69 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR01159 DNA gyrase subunit B signature 180 195 1.9E-57 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR01159 DNA gyrase subunit B signature 195 208 1.9E-57 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR01159 DNA gyrase subunit B signature 613 625 1.9E-57 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR01159 DNA gyrase subunit B signature 495 504 1.9E-57 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.9E-57 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR01159 DNA gyrase subunit B signature 629 645 1.9E-57 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR01159 DNA gyrase subunit B signature 267 285 1.9E-57 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR01159 DNA gyrase subunit B signature 385 399 1.9E-57 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR01159 DNA gyrase subunit B signature 337 353 1.9E-57 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 PRINTS PR01159 DNA gyrase subunit B signature 399 419 1.9E-57 T 22-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 AMK43_RS00035 f1c46448ff772ed1c298b92ab61f32c7 660 SMART SM00387 30 175 5.1E-27 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS03995 025f703dce1cf8ce1c3c69c4a0ea06dd 386 PANTHER PTHR30040:SF2 21 385 3.4E-50 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 AMK43_RS03995 025f703dce1cf8ce1c3c69c4a0ea06dd 386 PANTHER PTHR30040 21 385 3.4E-50 T 22-04-2016 AMK43_RS03995 025f703dce1cf8ce1c3c69c4a0ea06dd 386 Pfam PF02424 ApbE family 73 360 2.2E-48 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 AMK43_RS03995 025f703dce1cf8ce1c3c69c4a0ea06dd 386 PIRSF PIRSF006268 12 378 2.0E-61 T 22-04-2016 IPR024932 Flavin transferase ApbE GO:0017013 AMK43_RS03995 025f703dce1cf8ce1c3c69c4a0ea06dd 386 SUPERFAMILY SSF143631 48 373 4.18E-53 T 22-04-2016 IPR003374 ApbE-like domain AMK43_RS05405 874d2c5c62790167674a4850e230803c 409 Gene3D G3DSA:3.40.50.300 52 191 6.6E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05405 874d2c5c62790167674a4850e230803c 409 Pfam PF05128 Domain of unknown function (DUF697) 264 374 1.7E-10 T 22-04-2016 IPR021147 Protein of unknown function DUF697 AMK43_RS05405 874d2c5c62790167674a4850e230803c 409 SUPERFAMILY SSF52540 42 257 1.85E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05405 874d2c5c62790167674a4850e230803c 409 Pfam PF01926 50S ribosome-binding GTPase 64 184 1.8E-15 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS06755 eee1b104514b5eff5e9281be6f8bc45f 335 SMART SM00740 39 104 1.0E-6 T 22-04-2016 IPR005543 PASTA domain AMK43_RS06755 eee1b104514b5eff5e9281be6f8bc45f 335 SMART SM00740 105 171 4.1E-10 T 22-04-2016 IPR005543 PASTA domain AMK43_RS06755 eee1b104514b5eff5e9281be6f8bc45f 335 SMART SM00740 174 241 2.0E-9 T 22-04-2016 IPR005543 PASTA domain AMK43_RS06755 eee1b104514b5eff5e9281be6f8bc45f 335 Pfam PF03793 PASTA domain 110 170 4.6E-11 T 22-04-2016 IPR005543 PASTA domain AMK43_RS06755 eee1b104514b5eff5e9281be6f8bc45f 335 Pfam PF03793 PASTA domain 179 239 4.0E-12 T 22-04-2016 IPR005543 PASTA domain AMK43_RS06755 eee1b104514b5eff5e9281be6f8bc45f 335 Pfam PF03793 PASTA domain 44 104 4.8E-11 T 22-04-2016 IPR005543 PASTA domain AMK43_RS09685 7fd67bfb5cbf2d7580434efda086d0f9 153 PANTHER PTHR13256:SF10 1 141 6.7E-19 T 22-04-2016 AMK43_RS09685 7fd67bfb5cbf2d7580434efda086d0f9 153 Pfam PF13302 Acetyltransferase (GNAT) domain 7 139 2.3E-20 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS09685 7fd67bfb5cbf2d7580434efda086d0f9 153 SUPERFAMILY SSF55729 1 141 5.32E-30 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS09685 7fd67bfb5cbf2d7580434efda086d0f9 153 Gene3D G3DSA:3.40.630.30 2 143 1.1E-28 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS09685 7fd67bfb5cbf2d7580434efda086d0f9 153 PANTHER PTHR13256 1 141 6.7E-19 T 22-04-2016 AMK43_RS00355 e42cb6c628ba81e8cbf53d8569815426 644 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS00355 e42cb6c628ba81e8cbf53d8569815426 644 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS00355 e42cb6c628ba81e8cbf53d8569815426 644 Gene3D G3DSA:3.40.50.300 2 99 1.9E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00355 e42cb6c628ba81e8cbf53d8569815426 644 Gene3D G3DSA:3.40.50.300 133 287 1.9E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00355 e42cb6c628ba81e8cbf53d8569815426 644 Pfam PF12848 ABC transporter 239 324 5.6E-23 T 22-04-2016 IPR032781 ABC-transporter extension domain AMK43_RS00355 e42cb6c628ba81e8cbf53d8569815426 644 SUPERFAMILY SSF52540 6 251 4.97E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00355 e42cb6c628ba81e8cbf53d8569815426 644 Pfam PF00005 ABC transporter 19 200 1.1E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS00355 e42cb6c628ba81e8cbf53d8569815426 644 Pfam PF00005 ABC transporter 350 479 3.4E-24 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS00355 e42cb6c628ba81e8cbf53d8569815426 644 Gene3D G3DSA:3.40.50.300 335 567 1.6E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00355 e42cb6c628ba81e8cbf53d8569815426 644 PANTHER PTHR19211:SF64 1 575 7.8E-224 T 22-04-2016 AMK43_RS00355 e42cb6c628ba81e8cbf53d8569815426 644 SMART SM00382 359 523 2.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS00355 e42cb6c628ba81e8cbf53d8569815426 644 SMART SM00382 28 244 1.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS00355 e42cb6c628ba81e8cbf53d8569815426 644 PANTHER PTHR19211 1 575 7.8E-224 T 22-04-2016 AMK43_RS00355 e42cb6c628ba81e8cbf53d8569815426 644 SUPERFAMILY SSF52540 318 536 9.84E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10645 75ce80d09b639c980c2f865aa5481ddf 103 PRINTS PR00421 Thioredoxin family signature 67 78 1.7E-7 T 22-04-2016 AMK43_RS10645 75ce80d09b639c980c2f865aa5481ddf 103 PRINTS PR00421 Thioredoxin family signature 19 27 1.7E-7 T 22-04-2016 AMK43_RS10645 75ce80d09b639c980c2f865aa5481ddf 103 PRINTS PR00421 Thioredoxin family signature 27 36 1.7E-7 T 22-04-2016 AMK43_RS10645 75ce80d09b639c980c2f865aa5481ddf 103 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 101 3.6E-33 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK43_RS10645 75ce80d09b639c980c2f865aa5481ddf 103 PIRSF PIRSF000077 1 103 1.7E-33 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK43_RS10645 75ce80d09b639c980c2f865aa5481ddf 103 SUPERFAMILY SSF52833 3 103 4.15E-34 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS10645 75ce80d09b639c980c2f865aa5481ddf 103 Gene3D G3DSA:3.40.30.10 3 102 7.2E-33 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS10645 75ce80d09b639c980c2f865aa5481ddf 103 Pfam PF00085 Thioredoxin 3 101 2.9E-26 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 AMK43_RS10645 75ce80d09b639c980c2f865aa5481ddf 103 PANTHER PTHR10438 1 103 9.2E-32 T 22-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 AMK43_RS04670 2d171999ee80e72d05200037c4c17fc6 275 Gene3D G3DSA:3.40.190.10 38 167 1.4E-54 T 22-04-2016 AMK43_RS04670 2d171999ee80e72d05200037c4c17fc6 275 PANTHER PTHR30429:SF0 1 275 4.3E-117 T 22-04-2016 AMK43_RS04670 2d171999ee80e72d05200037c4c17fc6 275 PANTHER PTHR30429 1 275 4.3E-117 T 22-04-2016 IPR004872 Lipoprotein NlpA family AMK43_RS04670 2d171999ee80e72d05200037c4c17fc6 275 Pfam PF03180 NLPA lipoprotein 41 275 1.2E-89 T 22-04-2016 IPR004872 Lipoprotein NlpA family AMK43_RS04670 2d171999ee80e72d05200037c4c17fc6 275 PIRSF PIRSF002854 1 275 7.3E-100 T 22-04-2016 IPR004872 Lipoprotein NlpA family AMK43_RS04670 2d171999ee80e72d05200037c4c17fc6 275 SUPERFAMILY SSF53850 39 275 6.34E-80 T 22-04-2016 AMK43_RS05080 5baa7e2b64cca088928e20accee0cb09 256 SUPERFAMILY SSF89550 1 254 1.26E-37 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 AMK43_RS05080 5baa7e2b64cca088928e20accee0cb09 256 Gene3D G3DSA:3.20.20.140 1 250 1.7E-35 T 22-04-2016 AMK43_RS05080 5baa7e2b64cca088928e20accee0cb09 256 Pfam PF02811 PHP domain 5 178 3.9E-8 T 22-04-2016 IPR004013 PHP domain GO:0003824 AMK43_RS05080 5baa7e2b64cca088928e20accee0cb09 256 PANTHER PTHR21039 2 252 2.2E-37 T 22-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 AMK43_RS05080 5baa7e2b64cca088928e20accee0cb09 256 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 4 230 3.0E-28 T 22-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 AMK43_RS01960 dc1b1e9500447fae806cc1476f80175d 147 PIRSF PIRSF005900 1 147 1.0E-44 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AMK43_RS01960 dc1b1e9500447fae806cc1476f80175d 147 PANTHER PTHR30295 3 146 5.0E-45 T 22-04-2016 AMK43_RS01960 dc1b1e9500447fae806cc1476f80175d 147 Gene3D G3DSA:1.20.1260.10 2 146 1.8E-50 T 22-04-2016 IPR012347 Ferritin-related AMK43_RS01960 dc1b1e9500447fae806cc1476f80175d 147 PANTHER PTHR30295:SF6 3 146 5.0E-45 T 22-04-2016 AMK43_RS01960 dc1b1e9500447fae806cc1476f80175d 147 Pfam PF00210 Ferritin-like domain 6 146 6.3E-26 T 22-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 AMK43_RS01960 dc1b1e9500447fae806cc1476f80175d 147 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 50 66 2.0E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AMK43_RS01960 dc1b1e9500447fae806cc1476f80175d 147 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 26 42 2.0E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AMK43_RS01960 dc1b1e9500447fae806cc1476f80175d 147 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 122 140 2.0E-13 T 22-04-2016 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 AMK43_RS01960 dc1b1e9500447fae806cc1476f80175d 147 SUPERFAMILY SSF47240 3 144 3.25E-40 T 22-04-2016 IPR009078 Ferritin-like superfamily AMK43_RS01960 dc1b1e9500447fae806cc1476f80175d 147 ProSitePatterns PS00819 Dps protein family signature 2. 52 66 - T 22-04-2016 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 AMK43_RS01875 f64c5aaf11ac496b0ca126933fedbd1b 339 PANTHER PTHR32196 10 339 3.9E-189 T 22-04-2016 AMK43_RS01875 f64c5aaf11ac496b0ca126933fedbd1b 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 327 3.8E-48 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK43_RS01875 f64c5aaf11ac496b0ca126933fedbd1b 339 PANTHER PTHR32196:SF18 10 339 3.9E-189 T 22-04-2016 IPR030158 Galactoside transport system permease protein MglC GO:0008643|GO:0016021 AMK43_RS11275 dd25c4eea35bd8f0ee1892dfa72efe8e 243 SUPERFAMILY SSF53448 4 239 6.26E-25 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11275 dd25c4eea35bd8f0ee1892dfa72efe8e 243 Pfam PF00535 Glycosyl transferase family 2 5 136 2.0E-12 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK43_RS11275 dd25c4eea35bd8f0ee1892dfa72efe8e 243 Gene3D G3DSA:3.90.550.10 4 122 3.7E-15 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS10615 4ab9845c5f4d5f4123a6a49b8eab0fb4 182 Gene3D G3DSA:2.160.10.10 66 176 7.1E-36 T 22-04-2016 AMK43_RS10615 4ab9845c5f4d5f4123a6a49b8eab0fb4 182 Gene3D G3DSA:1.10.3130.10 3 65 4.1E-18 T 22-04-2016 AMK43_RS10615 4ab9845c5f4d5f4123a6a49b8eab0fb4 182 PANTHER PTHR23416:SF55 1 172 8.8E-90 T 22-04-2016 AMK43_RS10615 4ab9845c5f4d5f4123a6a49b8eab0fb4 182 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK43_RS10615 4ab9845c5f4d5f4123a6a49b8eab0fb4 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 153 2.5E-9 T 22-04-2016 IPR001451 Hexapeptide repeat AMK43_RS10615 4ab9845c5f4d5f4123a6a49b8eab0fb4 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 70 110 0.0017 T 22-04-2016 IPR001451 Hexapeptide repeat AMK43_RS10615 4ab9845c5f4d5f4123a6a49b8eab0fb4 182 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 9 168 5.4E-73 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 AMK43_RS10615 4ab9845c5f4d5f4123a6a49b8eab0fb4 182 SUPERFAMILY SSF51161 7 176 7.07E-51 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK43_RS10615 4ab9845c5f4d5f4123a6a49b8eab0fb4 182 PANTHER PTHR23416 1 172 8.8E-90 T 22-04-2016 AMK43_RS10615 4ab9845c5f4d5f4123a6a49b8eab0fb4 182 PIRSF PIRSF000441 2 179 1.0E-78 T 22-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 AMK43_RS01685 5128dafc2a1d35ddf8d7d1979092ff36 403 SUPERFAMILY SSF51556 54 371 1.36E-69 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK43_RS01685 5128dafc2a1d35ddf8d7d1979092ff36 403 Gene3D G3DSA:2.30.40.10 359 401 7.3E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS01685 5128dafc2a1d35ddf8d7d1979092ff36 403 PANTHER PTHR11113 1 303 6.0E-91 T 22-04-2016 AMK43_RS01685 5128dafc2a1d35ddf8d7d1979092ff36 403 PANTHER PTHR11113 332 403 6.0E-91 T 22-04-2016 AMK43_RS01685 5128dafc2a1d35ddf8d7d1979092ff36 403 PANTHER PTHR11113:SF7 1 303 6.0E-91 T 22-04-2016 AMK43_RS01685 5128dafc2a1d35ddf8d7d1979092ff36 403 PANTHER PTHR11113:SF7 332 403 6.0E-91 T 22-04-2016 AMK43_RS01685 5128dafc2a1d35ddf8d7d1979092ff36 403 Gene3D G3DSA:2.30.40.10 3 54 1.9E-10 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS01685 5128dafc2a1d35ddf8d7d1979092ff36 403 Gene3D G3DSA:3.20.20.140 55 358 1.0E-71 T 22-04-2016 AMK43_RS01685 5128dafc2a1d35ddf8d7d1979092ff36 403 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 3 398 6.0E-84 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AMK43_RS01685 5128dafc2a1d35ddf8d7d1979092ff36 403 SUPERFAMILY SSF51338 2 53 3.3E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS01685 5128dafc2a1d35ddf8d7d1979092ff36 403 SUPERFAMILY SSF51338 371 401 3.3E-14 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS01685 5128dafc2a1d35ddf8d7d1979092ff36 403 Pfam PF01979 Amidohydrolase family 50 399 8.0E-23 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK43_RS01685 5128dafc2a1d35ddf8d7d1979092ff36 403 PIRSF PIRSF038994 1 403 1.2E-94 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AMK43_RS08385 da193a4d29212251bfb0e5336aba689c 368 ProSitePatterns PS00789 Chorismate synthase signature 3. 332 348 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS08385 da193a4d29212251bfb0e5336aba689c 368 Pfam PF01264 Chorismate synthase 10 357 3.3E-126 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS08385 da193a4d29212251bfb0e5336aba689c 368 PANTHER PTHR21085:SF0 1 367 7.4E-155 T 22-04-2016 AMK43_RS08385 da193a4d29212251bfb0e5336aba689c 368 TIGRFAM TIGR00033 aroC: chorismate synthase 10 362 6.3E-122 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS08385 da193a4d29212251bfb0e5336aba689c 368 Hamap MF_00300 Chorismate synthase [aroC]. 9 365 34.19 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS08385 da193a4d29212251bfb0e5336aba689c 368 Gene3D G3DSA:3.60.150.10 10 364 3.8E-135 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS08385 da193a4d29212251bfb0e5336aba689c 368 PANTHER PTHR21085 1 367 7.4E-155 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS08385 da193a4d29212251bfb0e5336aba689c 368 SUPERFAMILY SSF103263 5 364 1.57E-120 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS08385 da193a4d29212251bfb0e5336aba689c 368 PIRSF PIRSF001456 2 367 5.7E-137 T 22-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS08385 da193a4d29212251bfb0e5336aba689c 368 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 22-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 AMK43_RS00735 cb015346f5fded1e6890e5067422e171 317 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 317 82.992 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 AMK43_RS00735 cb015346f5fded1e6890e5067422e171 317 PANTHER PTHR34308:SF1 1 317 8.3E-98 T 22-04-2016 AMK43_RS00735 cb015346f5fded1e6890e5067422e171 317 Pfam PF03186 CobD/Cbib protein 8 298 1.3E-99 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 AMK43_RS00735 cb015346f5fded1e6890e5067422e171 317 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 3 315 9.2E-76 T 22-04-2016 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 UniPathway: UPA00148 AMK43_RS00735 cb015346f5fded1e6890e5067422e171 317 PANTHER PTHR34308 1 317 8.3E-98 T 22-04-2016 AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.0E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 Pfam PF00106 short chain dehydrogenase 4 193 2.5E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 SUPERFAMILY SSF51735 3 229 1.17E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 PANTHER PTHR24322:SF320 153 185 1.6E-52 T 22-04-2016 AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 PANTHER PTHR24322:SF320 7 137 1.6E-52 T 22-04-2016 AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 PANTHER PTHR24322 153 185 1.6E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 PANTHER PTHR24322 7 137 1.6E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.2E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 6.2E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.2E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.2E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.2E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.2E-28 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS04630 4eddaee3dc00525877990bbe2c25ccd0 253 Gene3D G3DSA:3.40.50.720 2 237 1.1E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS09470 b700327a0f032ae41e4f221b1796635e 205 SUPERFAMILY SSF52540 2 196 2.41E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09470 b700327a0f032ae41e4f221b1796635e 205 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS09470 b700327a0f032ae41e4f221b1796635e 205 PANTHER PTHR24220 3 194 7.1E-63 T 22-04-2016 AMK43_RS09470 b700327a0f032ae41e4f221b1796635e 205 Gene3D G3DSA:3.40.50.300 1 194 4.4E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09470 b700327a0f032ae41e4f221b1796635e 205 SMART SM00382 24 196 3.8E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS09470 b700327a0f032ae41e4f221b1796635e 205 Pfam PF00005 ABC transporter 16 151 1.2E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 PANTHER PTHR11911 302 486 2.2E-234 T 22-04-2016 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 PANTHER PTHR11911 1 284 2.2E-234 T 22-04-2016 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 12 457 2.2E-187 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 12 475 2.1E-163 T 22-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 SUPERFAMILY SSF51412 219 479 4.19E-123 T 22-04-2016 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 SUPERFAMILY SSF51412 9 94 4.19E-123 T 22-04-2016 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 12 488 82.973 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 SUPERFAMILY SSF54631 67 207 1.77E-29 T 22-04-2016 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 Pfam PF00571 CBS domain 97 143 1.3E-9 T 22-04-2016 IPR000644 CBS domain AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 Pfam PF00571 CBS domain 153 204 3.0E-9 T 22-04-2016 IPR000644 CBS domain AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 PIRSF PIRSF000130 1 490 9.2E-206 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 SMART SM01240 11 475 0.0 T 22-04-2016 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 PANTHER PTHR11911:SF6 302 486 2.2E-234 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 PANTHER PTHR11911:SF6 1 284 2.2E-234 T 22-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 297 309 - T 22-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 Gene3D G3DSA:3.20.20.70 9 487 3.5E-196 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 SMART SM00116 100 148 1.2E-9 T 22-04-2016 IPR000644 CBS domain AMK43_RS08145 44b0dda033299ada76846557826eee6d 490 SMART SM00116 161 208 1.3E-9 T 22-04-2016 IPR000644 CBS domain AMK43_RS05000 86db7f9add1b19740f16b8f60fb503e5 246 SUPERFAMILY SSF51366 9 242 1.04E-61 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK43_RS05000 86db7f9add1b19740f16b8f60fb503e5 246 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 12 238 5.6E-57 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS05000 86db7f9add1b19740f16b8f60fb503e5 246 Gene3D G3DSA:3.20.20.70 10 242 2.0E-77 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS05000 86db7f9add1b19740f16b8f60fb503e5 246 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 9 243 33.215 T 22-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS05000 86db7f9add1b19740f16b8f60fb503e5 246 PANTHER PTHR32119:SF2 2 246 2.8E-86 T 22-04-2016 AMK43_RS05000 86db7f9add1b19740f16b8f60fb503e5 246 SMART SM00934 11 238 1.5E-73 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS05000 86db7f9add1b19740f16b8f60fb503e5 246 PANTHER PTHR32119 2 246 2.8E-86 T 22-04-2016 AMK43_RS05000 86db7f9add1b19740f16b8f60fb503e5 246 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 11 237 6.2E-48 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS06110 ad412ae427fd9af5f635db4acc2116db 249 PANTHER PTHR30151 8 247 1.0E-74 T 22-04-2016 AMK43_RS06110 ad412ae427fd9af5f635db4acc2116db 249 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 240 3.4E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS06110 ad412ae427fd9af5f635db4acc2116db 249 Gene3D G3DSA:1.10.3720.10 49 239 3.5E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS06110 ad412ae427fd9af5f635db4acc2116db 249 SUPERFAMILY SSF161098 50 235 1.19E-30 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS06110 ad412ae427fd9af5f635db4acc2116db 249 PANTHER PTHR30151:SF8 8 247 1.0E-74 T 22-04-2016 AMK43_RS10445 c86a784a17ca1d25603a3e0600fd2749 250 Gene3D G3DSA:3.30.1270.10 213 248 5.5E-36 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 AMK43_RS10445 c86a784a17ca1d25603a3e0600fd2749 250 Gene3D G3DSA:3.30.1270.10 82 134 5.5E-36 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 AMK43_RS10445 c86a784a17ca1d25603a3e0600fd2749 250 Pfam PF01709 Transcriptional regulator 5 238 4.3E-87 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like AMK43_RS10445 c86a784a17ca1d25603a3e0600fd2749 250 Gene3D G3DSA:1.10.10.200 2 78 5.0E-33 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like AMK43_RS10445 c86a784a17ca1d25603a3e0600fd2749 250 SUPERFAMILY SSF75625 3 247 7.19E-90 T 22-04-2016 IPR029072 YebC-like AMK43_RS10445 c86a784a17ca1d25603a3e0600fd2749 250 Gene3D G3DSA:3.30.70.980 135 205 7.5E-25 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 AMK43_RS10445 c86a784a17ca1d25603a3e0600fd2749 250 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 239 1.6E-91 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like AMK43_RS10445 c86a784a17ca1d25603a3e0600fd2749 250 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 34.972 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like AMK43_RS10445 c86a784a17ca1d25603a3e0600fd2749 250 PANTHER PTHR12532 2 242 4.3E-106 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like AMK43_RS10495 94ff1647c1dfc63bb5812722a982162a 122 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 117 1.5E-20 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMK43_RS10495 94ff1647c1dfc63bb5812722a982162a 122 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 121 24.878 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMK43_RS10495 94ff1647c1dfc63bb5812722a982162a 122 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 88 2.0E-14 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMK43_RS10495 94ff1647c1dfc63bb5812722a982162a 122 SUPERFAMILY SSF56214 3 119 1.05E-30 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMK43_RS10495 94ff1647c1dfc63bb5812722a982162a 122 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 3 120 6.4E-32 T 22-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMK43_RS10495 94ff1647c1dfc63bb5812722a982162a 122 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 119 1.0E-28 T 22-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMK43_RS10495 94ff1647c1dfc63bb5812722a982162a 122 Gene3D G3DSA:3.90.470.20 3 119 8.1E-40 T 22-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 AMK43_RS00300 3f92a7cf10d62d2abec96dc648030f03 447 Gene3D G3DSA:3.90.190.20 310 446 3.3E-42 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK43_RS00300 3f92a7cf10d62d2abec96dc648030f03 447 Pfam PF01225 Mur ligase family, catalytic domain 8 107 1.8E-20 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS00300 3f92a7cf10d62d2abec96dc648030f03 447 PANTHER PTHR23135 1 436 1.6E-154 T 22-04-2016 AMK43_RS00300 3f92a7cf10d62d2abec96dc648030f03 447 Pfam PF02875 Mur ligase family, glutamate ligase domain 309 390 5.8E-19 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK43_RS00300 3f92a7cf10d62d2abec96dc648030f03 447 PANTHER PTHR23135:SF5 1 436 1.6E-154 T 22-04-2016 AMK43_RS00300 3f92a7cf10d62d2abec96dc648030f03 447 SUPERFAMILY SSF53623 95 305 1.83E-55 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS00300 3f92a7cf10d62d2abec96dc648030f03 447 Gene3D G3DSA:3.40.50.720 6 93 2.6E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS00300 3f92a7cf10d62d2abec96dc648030f03 447 SUPERFAMILY SSF51984 6 93 1.03E-22 T 22-04-2016 AMK43_RS00300 3f92a7cf10d62d2abec96dc648030f03 447 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 8 442 1.1E-135 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS00300 3f92a7cf10d62d2abec96dc648030f03 447 Pfam PF08245 Mur ligase middle domain 112 286 6.3E-26 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS00300 3f92a7cf10d62d2abec96dc648030f03 447 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 5 447 35.271 T 22-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS00300 3f92a7cf10d62d2abec96dc648030f03 447 SUPERFAMILY SSF53244 306 445 3.85E-33 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK43_RS00300 3f92a7cf10d62d2abec96dc648030f03 447 Gene3D G3DSA:3.40.1190.10 95 309 6.2E-63 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS02930 4adba4b2ec17e82db432dcaa50ec232a 425 Gene3D G3DSA:3.40.190.10 37 144 3.0E-34 T 22-04-2016 AMK43_RS02930 4adba4b2ec17e82db432dcaa50ec232a 425 Gene3D G3DSA:3.40.190.10 319 351 3.0E-34 T 22-04-2016 AMK43_RS02930 4adba4b2ec17e82db432dcaa50ec232a 425 SUPERFAMILY SSF53850 20 420 2.36E-67 T 22-04-2016 AMK43_RS02930 4adba4b2ec17e82db432dcaa50ec232a 425 Gene3D G3DSA:3.40.190.10 146 318 3.9E-12 T 22-04-2016 AMK43_RS02930 4adba4b2ec17e82db432dcaa50ec232a 425 Pfam PF01547 Bacterial extracellular solute-binding protein 56 333 2.7E-32 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 AMK43_RS02930 4adba4b2ec17e82db432dcaa50ec232a 425 PANTHER PTHR30061 1 423 4.1E-53 T 22-04-2016 AMK43_RS00165 24038a6b76bdaa15b67d7d147ac5e1c9 122 Pfam PF04304 Protein of unknown function (DUF454) 2 117 4.9E-38 T 22-04-2016 IPR007401 Protein of unknown function DUF454 AMK43_RS00165 24038a6b76bdaa15b67d7d147ac5e1c9 122 PANTHER PTHR35813:SF1 1 122 4.0E-36 T 22-04-2016 AMK43_RS00165 24038a6b76bdaa15b67d7d147ac5e1c9 122 PANTHER PTHR35813 1 122 4.0E-36 T 22-04-2016 AMK43_RS00165 24038a6b76bdaa15b67d7d147ac5e1c9 122 PIRSF PIRSF016789 1 122 1.8E-34 T 22-04-2016 IPR007401 Protein of unknown function DUF454 AMK43_RS05115 3a99828703094fe9b2fa96b89cd9f4b4 317 Pfam PF14133 Domain of unknown function (DUF4300) 52 306 2.1E-100 T 22-04-2016 IPR025389 Protein of unknown function DUF4300 AMK43_RS10220 1a1de8fb8ad8c295ae073ccba1cfc95a 363 Gene3D G3DSA:2.40.100.10 244 362 8.4E-41 T 22-04-2016 IPR029000 Cyclophilin-like domain AMK43_RS10220 1a1de8fb8ad8c295ae073ccba1cfc95a 363 Pfam PF05913 Bacterial protein of unknown function (DUF871) 3 360 2.2E-134 T 22-04-2016 IPR008589 Protein of unknown function DUF871, prokaryotic AMK43_RS10220 1a1de8fb8ad8c295ae073ccba1cfc95a 363 SUPERFAMILY SSF51445 1 242 1.31E-85 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS10220 1a1de8fb8ad8c295ae073ccba1cfc95a 363 PANTHER PTHR38435 3 363 8.4E-161 T 22-04-2016 AMK43_RS10220 1a1de8fb8ad8c295ae073ccba1cfc95a 363 SUPERFAMILY SSF50891 250 361 9.48E-32 T 22-04-2016 IPR029000 Cyclophilin-like domain AMK43_RS10220 1a1de8fb8ad8c295ae073ccba1cfc95a 363 PANTHER PTHR38435:SF1 3 363 8.4E-161 T 22-04-2016 AMK43_RS10220 1a1de8fb8ad8c295ae073ccba1cfc95a 363 Gene3D G3DSA:3.20.20.70 1 241 3.0E-95 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS02330 518c0786351879a252474932acf91290 883 SUPERFAMILY SSF46589 818 879 7.32E-13 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 PANTHER PTHR11946 814 874 0.0 T 22-04-2016 AMK43_RS02330 518c0786351879a252474932acf91290 883 PANTHER PTHR11946 1 794 0.0 T 22-04-2016 AMK43_RS02330 518c0786351879a252474932acf91290 883 SUPERFAMILY SSF47323 581 832 3.18E-67 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 SUPERFAMILY SSF52374 343 574 1.08E-146 T 22-04-2016 AMK43_RS02330 518c0786351879a252474932acf91290 883 SUPERFAMILY SSF52374 4 195 1.08E-146 T 22-04-2016 AMK43_RS02330 518c0786351879a252474932acf91290 883 PANTHER PTHR11946:SF5 814 874 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 PANTHER PTHR11946:SF5 1 794 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 Gene3D G3DSA:3.40.50.620 8 196 2.6E-150 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS02330 518c0786351879a252474932acf91290 883 Gene3D G3DSA:3.40.50.620 343 568 2.6E-150 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS02330 518c0786351879a252474932acf91290 883 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 57 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 18 569 3.7E-210 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 Gene3D G3DSA:1.10.730.10 569 750 3.5E-59 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 SUPERFAMILY SSF50677 195 343 9.16E-61 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 Hamap MF_02004 Valine--tRNA ligase [valS]. 5 883 15.822 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 818 879 1.2E-15 T 22-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 AMK43_RS02330 518c0786351879a252474932acf91290 883 Gene3D G3DSA:3.90.740.10 197 339 4.4E-51 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 862 0.0 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 PRINTS PR00986 Valyl-tRNA synthetase signature 348 361 4.61E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 PRINTS PR00986 Valyl-tRNA synthetase signature 481 499 4.61E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 PRINTS PR00986 Valyl-tRNA synthetase signature 39 50 4.61E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 PRINTS PR00986 Valyl-tRNA synthetase signature 450 471 4.61E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 PRINTS PR00986 Valyl-tRNA synthetase signature 233 250 4.61E-36 T 22-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 AMK43_RS02330 518c0786351879a252474932acf91290 883 Pfam PF08264 Anticodon-binding domain of tRNA 612 759 1.9E-47 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AMK43_RS06305 247bd7acf7c144f56fa639f541fa6e43 79 Pfam PF00085 Thioredoxin 4 76 4.7E-6 T 22-04-2016 IPR013766 Thioredoxin domain GO:0045454 AMK43_RS06305 247bd7acf7c144f56fa639f541fa6e43 79 Gene3D G3DSA:3.40.30.10 6 76 7.0E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS06305 247bd7acf7c144f56fa639f541fa6e43 79 SUPERFAMILY SSF52833 4 76 1.58E-14 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS09465 a2fd063466519ad99b70884988d44f5a 377 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 116 205 3.8E-9 T 22-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 AMK43_RS09465 a2fd063466519ad99b70884988d44f5a 377 SUPERFAMILY SSF56645 8 212 2.23E-39 T 22-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 AMK43_RS09465 a2fd063466519ad99b70884988d44f5a 377 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 5 107 4.0E-19 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMK43_RS09465 a2fd063466519ad99b70884988d44f5a 377 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 238 368 2.1E-8 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK43_RS09465 a2fd063466519ad99b70884988d44f5a 377 SUPERFAMILY SSF47203 236 374 1.5E-17 T 22-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 AMK43_RS09465 a2fd063466519ad99b70884988d44f5a 377 PANTHER PTHR10909:SF10 9 350 6.0E-34 T 22-04-2016 AMK43_RS09465 a2fd063466519ad99b70884988d44f5a 377 Gene3D G3DSA:1.10.540.10 7 106 3.6E-24 T 22-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 AMK43_RS09465 a2fd063466519ad99b70884988d44f5a 377 Gene3D G3DSA:2.40.110.10 122 213 1.4E-11 T 22-04-2016 AMK43_RS09465 a2fd063466519ad99b70884988d44f5a 377 PANTHER PTHR10909 9 350 6.0E-34 T 22-04-2016 AMK43_RS09465 a2fd063466519ad99b70884988d44f5a 377 Gene3D G3DSA:1.20.140.10 225 374 2.7E-16 T 22-04-2016 AMK43_RS06970 b4d0cdf0f33b4b45c7f524de5ba5a5cf 597 Gene3D G3DSA:3.10.105.10 349 557 2.5E-36 T 22-04-2016 AMK43_RS06970 b4d0cdf0f33b4b45c7f524de5ba5a5cf 597 PANTHER PTHR30290 1 597 3.0E-76 T 22-04-2016 AMK43_RS06970 b4d0cdf0f33b4b45c7f524de5ba5a5cf 597 Gene3D G3DSA:3.40.190.10 186 348 3.9E-32 T 22-04-2016 AMK43_RS06970 b4d0cdf0f33b4b45c7f524de5ba5a5cf 597 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 107 491 7.5E-73 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK43_RS06970 b4d0cdf0f33b4b45c7f524de5ba5a5cf 597 PANTHER PTHR30290:SF9 1 597 3.0E-76 T 22-04-2016 AMK43_RS06970 b4d0cdf0f33b4b45c7f524de5ba5a5cf 597 Gene3D G3DSA:3.90.76.10 91 185 2.3E-20 T 22-04-2016 AMK43_RS06970 b4d0cdf0f33b4b45c7f524de5ba5a5cf 597 SUPERFAMILY SSF53850 67 577 6.01E-97 T 22-04-2016 AMK43_RS06970 b4d0cdf0f33b4b45c7f524de5ba5a5cf 597 PIRSF PIRSF002741 1 583 1.1E-62 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK43_RS09080 0153d289691499c4f80d89e77f9c500a 215 SUPERFAMILY SSF48150 29 190 1.0E-19 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK43_RS09080 0153d289691499c4f80d89e77f9c500a 215 Gene3D G3DSA:1.10.1670.10 136 183 1.2E-4 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMK43_RS09080 0153d289691499c4f80d89e77f9c500a 215 PIRSF PIRSF005954 1 215 3.5E-57 T 22-04-2016 IPR012092 8-oxoguanine DNA glycosylase/DNA lyase, thermostable GO:0003906|GO:0006281|GO:0016799 AMK43_RS09080 0153d289691499c4f80d89e77f9c500a 215 SMART SM00478 47 209 8.5E-8 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK43_RS09080 0153d289691499c4f80d89e77f9c500a 215 Gene3D G3DSA:1.10.340.30 35 135 3.4E-9 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK43_RS06380 cbf4640a338a6a357658fad536f18432 604 PANTHER PTHR30009 7 454 5.2E-119 T 22-04-2016 AMK43_RS06380 cbf4640a338a6a357658fad536f18432 604 PANTHER PTHR30009 475 603 5.2E-119 T 22-04-2016 AMK43_RS06380 cbf4640a338a6a357658fad536f18432 604 Pfam PF00367 phosphotransferase system, EIIB 522 554 3.2E-11 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMK43_RS06380 cbf4640a338a6a357658fad536f18432 604 PANTHER PTHR30009:SF11 7 454 5.2E-119 T 22-04-2016 AMK43_RS06380 cbf4640a338a6a357658fad536f18432 604 PANTHER PTHR30009:SF11 475 603 5.2E-119 T 22-04-2016 AMK43_RS06380 cbf4640a338a6a357658fad536f18432 604 SUPERFAMILY SSF55604 520 591 6.15E-17 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS06380 cbf4640a338a6a357658fad536f18432 604 Pfam PF02378 Phosphotransferase system, EIIC 14 383 1.4E-56 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMK43_RS06380 cbf4640a338a6a357658fad536f18432 604 Gene3D G3DSA:3.30.1360.60 518 593 2.1E-21 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS02305 eb6f42b18c15696d6897077073d9d2aa 220 PANTHER PTHR24567 4 207 2.6E-54 T 22-04-2016 AMK43_RS02305 eb6f42b18c15696d6897077073d9d2aa 220 SUPERFAMILY SSF51206 4 147 5.11E-28 T 22-04-2016 IPR018490 Cyclic nucleotide-binding-like AMK43_RS02305 eb6f42b18c15696d6897077073d9d2aa 220 SUPERFAMILY SSF46785 157 215 1.68E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02305 eb6f42b18c15696d6897077073d9d2aa 220 PANTHER PTHR24567:SF38 4 207 2.6E-54 T 22-04-2016 AMK43_RS02305 eb6f42b18c15696d6897077073d9d2aa 220 Gene3D G3DSA:2.60.120.10 11 147 4.3E-32 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK43_RS02305 eb6f42b18c15696d6897077073d9d2aa 220 Gene3D G3DSA:1.10.10.10 159 215 2.0E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02305 eb6f42b18c15696d6897077073d9d2aa 220 Pfam PF00027 Cyclic nucleotide-binding domain 36 124 2.3E-12 T 22-04-2016 IPR000595 Cyclic nucleotide-binding domain AMK43_RS05755 5ace0bb5177274f30bd6dacfdc9622f8 196 Gene3D G3DSA:3.30.420.10 2 182 4.1E-30 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS05755 5ace0bb5177274f30bd6dacfdc9622f8 196 PANTHER PTHR30231 1 182 2.3E-13 T 22-04-2016 AMK43_RS05755 5ace0bb5177274f30bd6dacfdc9622f8 196 SUPERFAMILY SSF53098 4 188 5.7E-22 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS05755 5ace0bb5177274f30bd6dacfdc9622f8 196 Pfam PF00929 Exonuclease 6 176 4.5E-7 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK43_RS05755 5ace0bb5177274f30bd6dacfdc9622f8 196 SMART SM00479 4 185 1.0E-6 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK43_RS04540 72371ef9cffc2c4e4cb53603e735f753 284 Gene3D G3DSA:3.30.70.580 19 86 1.4E-12 T 22-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS04540 72371ef9cffc2c4e4cb53603e735f753 284 SUPERFAMILY SSF54814 225 276 4.05E-7 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMK43_RS04540 72371ef9cffc2c4e4cb53603e735f753 284 Gene3D G3DSA:3.30.1370.10 246 276 9.3E-4 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMK43_RS04540 72371ef9cffc2c4e4cb53603e735f753 284 Pfam PF07650 KH domain 241 279 6.0E-5 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 AMK43_RS04540 72371ef9cffc2c4e4cb53603e735f753 284 SUPERFAMILY SSF55120 17 222 5.61E-19 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS04540 72371ef9cffc2c4e4cb53603e735f753 284 Gene3D G3DSA:3.30.70.660 140 198 2.6E-5 T 22-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS05210 22b796a4a6392e71459a1ef6c2ec5c16 184 SUPERFAMILY SSF160527 82 183 1.16E-15 T 22-04-2016 AMK43_RS05210 22b796a4a6392e71459a1ef6c2ec5c16 184 Hamap MF_00311 V-type proton ATPase subunit E [atpE]. 2 184 11.612 T 22-04-2016 IPR002842 ATPase, V1/A1 complex, subunit E GO:0015991|GO:0033178|GO:0046961 AMK43_RS05210 22b796a4a6392e71459a1ef6c2ec5c16 184 Pfam PF01991 ATP synthase (E/31 kDa) subunit 10 119 6.3E-10 T 22-04-2016 IPR002842 ATPase, V1/A1 complex, subunit E GO:0015991|GO:0033178|GO:0046961 AMK43_RS09320 9685343a7ea0ccbf624c28a20ca4a578 2294 SMART SM00869 2015 2288 1.3E-6 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS09320 9685343a7ea0ccbf624c28a20ca4a578 2294 Pfam PF03797 Autotransporter beta-domain 2014 2281 6.4E-23 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS09320 9685343a7ea0ccbf624c28a20ca4a578 2294 SUPERFAMILY SSF103515 1980 2291 2.35E-20 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 PRINTS PR00419 Adrenodoxin reductase family signature 673 687 3.0E-15 T 22-04-2016 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 PRINTS PR00419 Adrenodoxin reductase family signature 544 566 3.0E-15 T 22-04-2016 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 PRINTS PR00419 Adrenodoxin reductase family signature 567 580 3.0E-15 T 22-04-2016 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 924 935 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 446 520 1.8E-14 T 22-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 SUPERFAMILY SSF46548 445 552 1.94E-12 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 SUPERFAMILY SSF51971 754 831 6.36E-6 T 22-04-2016 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 PANTHER PTHR11938 446 838 5.9E-56 T 22-04-2016 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 Gene3D G3DSA:3.50.50.60 768 841 1.1E-13 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 Gene3D G3DSA:3.50.50.60 545 631 1.6E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 SUPERFAMILY SSF46548 872 956 5.75E-7 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 Gene3D G3DSA:3.50.50.60 632 767 1.8E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 Gene3D G3DSA:1.10.1060.10 871 937 1.5E-8 T 22-04-2016 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 Gene3D G3DSA:1.10.1060.10 446 544 7.3E-19 T 22-04-2016 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 TIGRFAM TIGR03315 Se_ygfK: putative selenate reductase, YgfK subunit 2 1008 0.0 T 22-04-2016 IPR017701 Putative selenate reductase YgfK AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 SUPERFAMILY SSF51971 542 777 1.24E-46 T 22-04-2016 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 Gene3D G3DSA:3.20.20.70 157 179 9.3E-4 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 Gene3D G3DSA:3.20.20.70 46 88 9.3E-4 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 Gene3D G3DSA:3.20.20.70 212 358 9.3E-4 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 PANTHER PTHR11938:SF108 446 838 5.9E-56 T 22-04-2016 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 543 830 1.3E-36 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 SUPERFAMILY SSF51395 46 140 3.81E-10 T 22-04-2016 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 SUPERFAMILY SSF51395 198 249 3.81E-10 T 22-04-2016 AMK43_RS04735 8bc66130da8646341bfa1ab76b71492f 1011 SUPERFAMILY SSF51395 279 393 3.81E-10 T 22-04-2016 AMK43_RS08655 a7faf269b6550c81d23543011750212b 325 SUPERFAMILY SSF46689 281 323 1.57E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS08655 a7faf269b6550c81d23543011750212b 325 SMART SM00342 239 321 1.3E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS08655 a7faf269b6550c81d23543011750212b 325 PANTHER PTHR11019:SF52 237 320 7.6E-22 T 22-04-2016 AMK43_RS08655 a7faf269b6550c81d23543011750212b 325 Gene3D G3DSA:1.10.10.60 282 323 7.3E-12 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS08655 a7faf269b6550c81d23543011750212b 325 PANTHER PTHR11019 237 320 7.6E-22 T 22-04-2016 AMK43_RS08655 a7faf269b6550c81d23543011750212b 325 Pfam PF12833 Helix-turn-helix domain 245 322 5.4E-14 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS04830 e2844b077efb4598f383894fdd6a6a74 370 Gene3D G3DSA:3.90.550.10 3 286 1.2E-81 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS04830 e2844b077efb4598f383894fdd6a6a74 370 PANTHER PTHR12526 165 314 6.8E-33 T 22-04-2016 AMK43_RS04830 e2844b077efb4598f383894fdd6a6a74 370 PANTHER PTHR12526:SF387 165 314 6.8E-33 T 22-04-2016 AMK43_RS04830 e2844b077efb4598f383894fdd6a6a74 370 Pfam PF01050 Mannose-6-phosphate isomerase 333 369 3.3E-7 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 AMK43_RS04830 e2844b077efb4598f383894fdd6a6a74 370 SUPERFAMILY SSF159283 299 366 2.22E-16 T 22-04-2016 AMK43_RS04830 e2844b077efb4598f383894fdd6a6a74 370 Pfam PF00483 Nucleotidyl transferase 6 300 8.2E-47 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMK43_RS04830 e2844b077efb4598f383894fdd6a6a74 370 SUPERFAMILY SSF53448 3 295 2.41E-61 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS05940 062ac011c3b5b87f463a6268a723d6ef 2365 Pfam PF03797 Autotransporter beta-domain 2083 2351 2.9E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS05940 062ac011c3b5b87f463a6268a723d6ef 2365 SMART SM00869 2082 2357 2.7E-9 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS05940 062ac011c3b5b87f463a6268a723d6ef 2365 Gene3D G3DSA:2.40.128.130 2047 2362 4.6E-28 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS05940 062ac011c3b5b87f463a6268a723d6ef 2365 SUPERFAMILY SSF103515 2052 2362 4.18E-22 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS08810 cc9110e0ba38bbbd8be9d08c6c2a3073 290 SUPERFAMILY SSF48576 3 267 6.37E-77 T 22-04-2016 IPR008949 Isoprenoid synthase domain AMK43_RS08810 cc9110e0ba38bbbd8be9d08c6c2a3073 290 PANTHER PTHR12001 2 273 2.3E-90 T 22-04-2016 IPR017446 Polyprenyl synthetase-related AMK43_RS08810 cc9110e0ba38bbbd8be9d08c6c2a3073 290 PANTHER PTHR12001:SF23 2 273 2.3E-90 T 22-04-2016 AMK43_RS08810 cc9110e0ba38bbbd8be9d08c6c2a3073 290 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMK43_RS08810 cc9110e0ba38bbbd8be9d08c6c2a3073 290 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 210 222 - T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMK43_RS08810 cc9110e0ba38bbbd8be9d08c6c2a3073 290 Gene3D G3DSA:1.10.600.10 3 282 1.8E-80 T 22-04-2016 IPR008949 Isoprenoid synthase domain AMK43_RS08810 cc9110e0ba38bbbd8be9d08c6c2a3073 290 Pfam PF00348 Polyprenyl synthetase 28 262 2.7E-52 T 22-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 AMK43_RS01555 8b942a2f9adb7b2acd3808e20799d351 120 SMART SM00448 3 115 3.6E-24 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS01555 8b942a2f9adb7b2acd3808e20799d351 120 Pfam PF00072 Response regulator receiver domain 6 115 8.2E-25 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS01555 8b942a2f9adb7b2acd3808e20799d351 120 SUPERFAMILY SSF52172 4 118 1.57E-28 T 22-04-2016 IPR011006 CheY-like superfamily AMK43_RS01555 8b942a2f9adb7b2acd3808e20799d351 120 Gene3D G3DSA:3.40.50.2300 5 118 4.2E-30 T 22-04-2016 AMK43_RS01555 8b942a2f9adb7b2acd3808e20799d351 120 PANTHER PTHR26402 3 113 2.1E-28 T 22-04-2016 AMK43_RS08700 4af98804deee66da07cbcf58b658576b 419 Gene3D G3DSA:3.40.309.10 227 376 2.3E-39 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK43_RS08700 4af98804deee66da07cbcf58b658576b 419 PIRSF PIRSF000151 2 419 2.7E-173 T 22-04-2016 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK43_RS08700 4af98804deee66da07cbcf58b658576b 419 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 325 347 - T 22-04-2016 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK43_RS08700 4af98804deee66da07cbcf58b658576b 419 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 13 408 1.5E-151 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK43_RS08700 4af98804deee66da07cbcf58b658576b 419 PANTHER PTHR11063:SF8 6 419 2.6E-174 T 22-04-2016 AMK43_RS08700 4af98804deee66da07cbcf58b658576b 419 SUPERFAMILY SSF53720 6 418 9.56E-111 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK43_RS08700 4af98804deee66da07cbcf58b658576b 419 PANTHER PTHR11063 6 419 2.6E-174 T 22-04-2016 AMK43_RS08700 4af98804deee66da07cbcf58b658576b 419 Pfam PF00171 Aldehyde dehydrogenase family 6 281 1.3E-11 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK43_RS08700 4af98804deee66da07cbcf58b658576b 419 Pfam PF00171 Aldehyde dehydrogenase family 319 409 1.4E-6 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK43_RS08700 4af98804deee66da07cbcf58b658576b 419 Gene3D G3DSA:3.40.605.10 5 224 3.2E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK43_RS08700 4af98804deee66da07cbcf58b658576b 419 Gene3D G3DSA:3.40.605.10 377 418 3.2E-97 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK43_RS08700 4af98804deee66da07cbcf58b658576b 419 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 5 418 40.361 T 22-04-2016 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK43_RS03640 a7172a93b5826594337e16e2be027d64 111 Gene3D G3DSA:3.10.450.40 49 99 5.8E-6 T 22-04-2016 AMK43_RS03640 a7172a93b5826594337e16e2be027d64 111 Pfam PF03413 Peptidase propeptide and YPEB domain 49 109 8.3E-10 T 22-04-2016 IPR025711 PepSY domain AMK43_RS06610 bbb71628018625ce60508c3a0dae26a3 399 SUPERFAMILY SSF51735 1 155 2.75E-31 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS06610 bbb71628018625ce60508c3a0dae26a3 399 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 180 202 - T 22-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AMK43_RS06610 bbb71628018625ce60508c3a0dae26a3 399 PIRSF PIRSF000098 1 397 1.4E-124 T 22-04-2016 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AMK43_RS06610 bbb71628018625ce60508c3a0dae26a3 399 SUPERFAMILY SSF55347 134 300 8.5E-44 T 22-04-2016 AMK43_RS06610 bbb71628018625ce60508c3a0dae26a3 399 Gene3D G3DSA:3.30.360.10 146 297 1.7E-46 T 22-04-2016 AMK43_RS06610 bbb71628018625ce60508c3a0dae26a3 399 Pfam PF00742 Homoserine dehydrogenase 134 313 1.4E-55 T 22-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 AMK43_RS06610 bbb71628018625ce60508c3a0dae26a3 399 PANTHER PTHR21499:SF2 1 367 1.2E-114 T 22-04-2016 AMK43_RS06610 bbb71628018625ce60508c3a0dae26a3 399 PANTHER PTHR21499 1 367 1.2E-114 T 22-04-2016 AMK43_RS06610 bbb71628018625ce60508c3a0dae26a3 399 Gene3D G3DSA:3.40.50.720 1 145 1.9E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS06610 bbb71628018625ce60508c3a0dae26a3 399 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 7 126 5.0E-15 T 22-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 AMK43_RS03285 abb9e3d5d64b35963b2711081ded892b 320 SUPERFAMILY SSF88946 72 143 4.71E-8 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03285 abb9e3d5d64b35963b2711081ded892b 320 SUPERFAMILY SSF88659 239 303 8.94E-6 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS03285 abb9e3d5d64b35963b2711081ded892b 320 Gene3D G3DSA:1.10.10.10 246 299 3.5E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03285 abb9e3d5d64b35963b2711081ded892b 320 Gene3D G3DSA:1.10.601.10 94 143 1.6E-6 T 22-04-2016 AMK43_RS03285 abb9e3d5d64b35963b2711081ded892b 320 Gene3D G3DSA:1.10.601.10 25 43 1.6E-6 T 22-04-2016 AMK43_RS00890 fdc4dcd1754588e8f9344cbe80c0800f 246 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 77 109 - T 22-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK43_RS00890 fdc4dcd1754588e8f9344cbe80c0800f 246 PANTHER PTHR21091:SF9 1 181 1.6E-50 T 22-04-2016 AMK43_RS00890 fdc4dcd1754588e8f9344cbe80c0800f 246 SUPERFAMILY SSF53790 2 244 1.03E-62 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK43_RS00890 fdc4dcd1754588e8f9344cbe80c0800f 246 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 6 241 5.1E-96 T 22-04-2016 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 AMK43_RS00890 fdc4dcd1754588e8f9344cbe80c0800f 246 PANTHER PTHR21091 1 181 1.6E-50 T 22-04-2016 AMK43_RS00890 fdc4dcd1754588e8f9344cbe80c0800f 246 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 209 5.0E-44 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK43_RS00890 fdc4dcd1754588e8f9344cbe80c0800f 246 Gene3D G3DSA:3.40.1010.10 3 114 8.0E-35 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AMK43_RS00890 fdc4dcd1754588e8f9344cbe80c0800f 246 Gene3D G3DSA:3.30.950.10 115 225 7.6E-15 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 AMK43_RS08005 fc5eb0b06d5286c78b3ed217ad95e9e6 191 Gene3D G3DSA:3.20.19.10 1 189 1.4E-45 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK43_RS08005 fc5eb0b06d5286c78b3ed217ad95e9e6 191 PANTHER PTHR11670:SF27 1 190 3.0E-84 T 22-04-2016 AMK43_RS08005 fc5eb0b06d5286c78b3ed217ad95e9e6 191 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 183 8.5E-65 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08005 fc5eb0b06d5286c78b3ed217ad95e9e6 191 Pfam PF00694 Aconitase C-terminal domain 1 123 3.9E-34 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08005 fc5eb0b06d5286c78b3ed217ad95e9e6 191 SUPERFAMILY SSF52016 1 187 6.08E-55 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK43_RS08005 fc5eb0b06d5286c78b3ed217ad95e9e6 191 PANTHER PTHR11670 1 190 3.0E-84 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS08005 fc5eb0b06d5286c78b3ed217ad95e9e6 191 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 191 37.407 T 22-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS10205 c23a145fd9917328e2a24a646cb91a18 601 Pfam PF00144 Beta-lactamase 135 500 1.4E-60 T 22-04-2016 IPR001466 Beta-lactamase-related AMK43_RS10205 c23a145fd9917328e2a24a646cb91a18 601 SUPERFAMILY SSF56601 129 493 1.74E-69 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS10205 c23a145fd9917328e2a24a646cb91a18 601 PANTHER PTHR22935:SF10 40 499 2.3E-74 T 22-04-2016 AMK43_RS10205 c23a145fd9917328e2a24a646cb91a18 601 Gene3D G3DSA:3.40.710.10 126 494 9.1E-78 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS10205 c23a145fd9917328e2a24a646cb91a18 601 PANTHER PTHR22935 40 499 2.3E-74 T 22-04-2016 AMK43_RS00090 cbd71ec8e2065d5d63db6eaded1ba37e 280 Gene3D G3DSA:1.10.10.60 5 57 8.2E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS00090 cbd71ec8e2065d5d63db6eaded1ba37e 280 Gene3D G3DSA:1.10.10.60 58 106 4.9E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS00090 cbd71ec8e2065d5d63db6eaded1ba37e 280 SMART SM00342 21 104 1.9E-16 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS00090 cbd71ec8e2065d5d63db6eaded1ba37e 280 Gene3D G3DSA:3.20.80.10 111 277 1.4E-35 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain AMK43_RS00090 cbd71ec8e2065d5d63db6eaded1ba37e 280 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK43_RS00090 cbd71ec8e2065d5d63db6eaded1ba37e 280 PANTHER PTHR36444:SF2 52 280 3.1E-70 T 22-04-2016 AMK43_RS00090 cbd71ec8e2065d5d63db6eaded1ba37e 280 SUPERFAMILY SSF55136 127 279 4.19E-30 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain AMK43_RS00090 cbd71ec8e2065d5d63db6eaded1ba37e 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 9.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK43_RS00090 cbd71ec8e2065d5d63db6eaded1ba37e 280 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 9.5E-5 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK43_RS00090 cbd71ec8e2065d5d63db6eaded1ba37e 280 Pfam PF12833 Helix-turn-helix domain 31 105 1.4E-15 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS00090 cbd71ec8e2065d5d63db6eaded1ba37e 280 Pfam PF06445 GyrI-like small molecule binding domain 127 277 1.1E-24 T 22-04-2016 IPR029442 GyrI-like small molecule binding domain AMK43_RS00090 cbd71ec8e2065d5d63db6eaded1ba37e 280 SUPERFAMILY SSF46689 58 106 3.32E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS00090 cbd71ec8e2065d5d63db6eaded1ba37e 280 PANTHER PTHR36444 52 280 3.1E-70 T 22-04-2016 AMK43_RS00090 cbd71ec8e2065d5d63db6eaded1ba37e 280 SMART SM00871 127 278 6.1E-30 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding AMK43_RS03425 73e3cd05efb1da20fc79d5ad9c416d39 248 Pfam PF00005 ABC transporter 18 164 1.9E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS03425 73e3cd05efb1da20fc79d5ad9c416d39 248 SMART SM00382 27 214 2.9E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS03425 73e3cd05efb1da20fc79d5ad9c416d39 248 Gene3D G3DSA:3.40.50.300 1 237 1.7E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03425 73e3cd05efb1da20fc79d5ad9c416d39 248 PANTHER PTHR24220:SF434 3 238 6.4E-134 T 22-04-2016 AMK43_RS03425 73e3cd05efb1da20fc79d5ad9c416d39 248 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS03425 73e3cd05efb1da20fc79d5ad9c416d39 248 PANTHER PTHR24220 3 238 6.4E-134 T 22-04-2016 AMK43_RS03425 73e3cd05efb1da20fc79d5ad9c416d39 248 SUPERFAMILY SSF52540 1 239 1.98E-73 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03295 2a0a455456347e8b43a0d4040db1cb1c 282 Gene3D G3DSA:3.40.50.10330 35 134 4.6E-27 T 22-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK43_RS03295 2a0a455456347e8b43a0d4040db1cb1c 282 Hamap MF_00361 NAD kinase [nadK]. 21 276 29.422 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK43_RS03295 2a0a455456347e8b43a0d4040db1cb1c 282 PANTHER PTHR20275 25 278 1.2E-78 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK43_RS03295 2a0a455456347e8b43a0d4040db1cb1c 282 SUPERFAMILY SSF111331 42 279 2.09E-73 T 22-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain AMK43_RS03295 2a0a455456347e8b43a0d4040db1cb1c 282 Gene3D G3DSA:2.60.200.30 135 249 8.2E-39 T 22-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK43_RS03295 2a0a455456347e8b43a0d4040db1cb1c 282 Pfam PF01513 ATP-NAD kinase 50 260 1.4E-51 T 22-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 957 1069 3.4E-9 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 SUPERFAMILY SSF52518 5 258 9.22E-78 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 SUPERFAMILY SSF52518 791 1175 2.1E-130 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 PIRSF PIRSF000159 1 1179 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 PANTHER PTHR32154:SF0 3 1179 0.0 T 22-04-2016 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 Gene3D G3DSA:3.40.920.10 417 623 2.0E-86 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 Gene3D G3DSA:3.40.50.970 793 1172 3.4E-143 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 Gene3D G3DSA:4.10.780.10 628 669 1.2E-15 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 5 1171 0.0 T 22-04-2016 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 248 4.2E-80 T 22-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 690 701 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 746 757 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 PANTHER PTHR32154 3 1179 0.0 T 22-04-2016 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 SMART SM00890 621 680 5.4E-26 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 SUPERFAMILY SSF52922 260 411 5.1E-50 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 Gene3D G3DSA:3.30.70.20 672 776 3.5E-20 T 22-04-2016 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 Pfam PF12838 4Fe-4S dicluster domain 690 758 2.4E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 Gene3D G3DSA:3.40.50.920 260 412 6.4E-62 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 Pfam PF10371 Domain of unknown function 627 679 2.6E-22 T 22-04-2016 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 373 4.3E-16 T 22-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 425 608 8.8E-33 T 22-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 SUPERFAMILY SSF53323 417 666 7.98E-80 T 22-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 Gene3D G3DSA:3.40.50.970 4 258 2.3E-111 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS01150 0c738e65a9c49d2cb0d8318e1eba54d2 1179 SUPERFAMILY SSF54862 669 836 1.67E-20 T 22-04-2016 AMK43_RS08240 7ca5bd0ce0e53198f53e4b5940590bee 271 PANTHER PTHR32243:SF7 5 271 4.4E-86 T 22-04-2016 AMK43_RS08240 7ca5bd0ce0e53198f53e4b5940590bee 271 PANTHER PTHR32243 5 271 4.4E-86 T 22-04-2016 AMK43_RS08240 7ca5bd0ce0e53198f53e4b5940590bee 271 SUPERFAMILY SSF161098 8 270 1.96E-59 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS08240 7ca5bd0ce0e53198f53e4b5940590bee 271 Gene3D G3DSA:1.10.3720.10 7 258 1.0E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS08240 7ca5bd0ce0e53198f53e4b5940590bee 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 49 260 1.6E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS01820 f1aac038d56b430a4913198a129d6265 296 Pfam PF00892 EamA-like transporter family 8 147 2.1E-15 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK43_RS01820 f1aac038d56b430a4913198a129d6265 296 Pfam PF00892 EamA-like transporter family 162 292 3.9E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK43_RS01820 f1aac038d56b430a4913198a129d6265 296 PANTHER PTHR22911:SF23 1 293 9.3E-50 T 22-04-2016 AMK43_RS01820 f1aac038d56b430a4913198a129d6265 296 SUPERFAMILY SSF103481 208 293 6.54E-10 T 22-04-2016 AMK43_RS01820 f1aac038d56b430a4913198a129d6265 296 PANTHER PTHR22911 1 293 9.3E-50 T 22-04-2016 AMK43_RS01820 f1aac038d56b430a4913198a129d6265 296 SUPERFAMILY SSF103481 47 150 3.14E-8 T 22-04-2016 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 Gene3D G3DSA:2.40.37.10 292 433 7.9E-48 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 310 407 1.3E-15 T 22-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 198 211 6.8E-14 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 388 401 6.8E-14 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 6.8E-14 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 6.8E-14 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 6.8E-14 T 22-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 63 81 - T 22-04-2016 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Reactome: REACT_13 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 PRINTS PR01181 Diaminopimelate decarboxylase signature 316 334 1.1E-22 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 PRINTS PR01181 Diaminopimelate decarboxylase signature 398 420 1.1E-22 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 1.1E-22 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 1.1E-22 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 45 297 3.5E-53 T 22-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 19 431 37.525 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 SUPERFAMILY SSF51419 31 299 3.34E-71 T 22-04-2016 IPR029066 PLP-binding barrel AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 430 1.0E-137 T 22-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 PANTHER PTHR11482:SF5 10 435 3.0E-145 T 22-04-2016 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 SUPERFAMILY SSF50621 272 431 4.4E-50 T 22-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 Gene3D G3DSA:3.20.20.10 41 291 2.5E-70 T 22-04-2016 IPR029066 PLP-binding barrel AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 237 250 - T 22-04-2016 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Reactome: REACT_13 AMK43_RS07690 f56faae0f5f7d96c2a54cb5d382fde4e 435 PANTHER PTHR11482 10 435 3.0E-145 T 22-04-2016 AMK43_RS04095 ac8ac080c7885a8d87c5b1b6c4d3b9cf 273 Pfam PF01219 Prokaryotic diacylglycerol kinase 44 144 1.5E-32 T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 AMK43_RS04095 ac8ac080c7885a8d87c5b1b6c4d3b9cf 273 Gene3D G3DSA:1.20.144.10 164 262 1.1E-9 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK43_RS04095 ac8ac080c7885a8d87c5b1b6c4d3b9cf 273 SMART SM00014 165 262 1.4E-6 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK43_RS04095 ac8ac080c7885a8d87c5b1b6c4d3b9cf 273 PANTHER PTHR34299:SF1 24 190 2.3E-35 T 22-04-2016 AMK43_RS04095 ac8ac080c7885a8d87c5b1b6c4d3b9cf 273 Pfam PF01569 PAP2 superfamily 184 266 8.1E-12 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK43_RS04095 ac8ac080c7885a8d87c5b1b6c4d3b9cf 273 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 97 108 - T 22-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 AMK43_RS04095 ac8ac080c7885a8d87c5b1b6c4d3b9cf 273 SUPERFAMILY SSF48317 83 266 2.75E-21 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK43_RS04095 ac8ac080c7885a8d87c5b1b6c4d3b9cf 273 Gene3D G3DSA:1.10.3830.10 30 148 5.5E-40 T 22-04-2016 AMK43_RS04095 ac8ac080c7885a8d87c5b1b6c4d3b9cf 273 PANTHER PTHR34299 24 190 2.3E-35 T 22-04-2016 AMK43_RS01915 56e1714cde06dfa9bcb5809df1c1f320 303 Pfam PF00288 GHMP kinases N terminal domain 88 151 1.3E-12 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMK43_RS01915 56e1714cde06dfa9bcb5809df1c1f320 303 Gene3D G3DSA:3.30.70.890 178 299 2.5E-31 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain AMK43_RS01915 56e1714cde06dfa9bcb5809df1c1f320 303 PANTHER PTHR10457 24 294 1.5E-41 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS01915 56e1714cde06dfa9bcb5809df1c1f320 303 TIGRFAM TIGR00549 mevalon_kin: mevalonate kinase 21 276 5.6E-71 T 22-04-2016 IPR006205 Mevalonate kinase GO:0004496|GO:0005524|GO:0005737|GO:0008299 KEGG: 00900+2.7.1.36|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 AMK43_RS01915 56e1714cde06dfa9bcb5809df1c1f320 303 Gene3D G3DSA:3.30.230.10 18 79 8.2E-10 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS01915 56e1714cde06dfa9bcb5809df1c1f320 303 Gene3D G3DSA:3.30.230.10 80 177 1.2E-23 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS01915 56e1714cde06dfa9bcb5809df1c1f320 303 SUPERFAMILY SSF55060 170 301 1.98E-27 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain AMK43_RS01915 56e1714cde06dfa9bcb5809df1c1f320 303 PRINTS PR00959 Mevalonate kinase family signature 21 45 5.1E-18 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS01915 56e1714cde06dfa9bcb5809df1c1f320 303 PRINTS PR00959 Mevalonate kinase family signature 92 114 5.1E-18 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS01915 56e1714cde06dfa9bcb5809df1c1f320 303 PRINTS PR00959 Mevalonate kinase family signature 261 278 5.1E-18 T 22-04-2016 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS01915 56e1714cde06dfa9bcb5809df1c1f320 303 SUPERFAMILY SSF54211 20 186 2.13E-32 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS01915 56e1714cde06dfa9bcb5809df1c1f320 303 Pfam PF08544 GHMP kinases C terminal 217 284 7.6E-10 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain AMK43_RS04405 569a8b0eb74f7e1f899e21f1d61fa477 494 Gene3D G3DSA:3.40.309.10 265 454 6.3E-72 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK43_RS04405 569a8b0eb74f7e1f899e21f1d61fa477 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 22-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 AMK43_RS04405 569a8b0eb74f7e1f899e21f1d61fa477 494 Pfam PF00171 Aldehyde dehydrogenase family 17 479 3.5E-178 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK43_RS04405 569a8b0eb74f7e1f899e21f1d61fa477 494 PANTHER PTHR11699:SF97 5 494 1.0E-275 T 22-04-2016 AMK43_RS04405 569a8b0eb74f7e1f899e21f1d61fa477 494 SUPERFAMILY SSF53720 5 483 1.44E-174 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK43_RS04405 569a8b0eb74f7e1f899e21f1d61fa477 494 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMK43_RS04405 569a8b0eb74f7e1f899e21f1d61fa477 494 PANTHER PTHR11699 5 494 1.0E-275 T 22-04-2016 AMK43_RS04405 569a8b0eb74f7e1f899e21f1d61fa477 494 Gene3D G3DSA:3.40.605.10 7 264 2.3E-96 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 SMART SM00671 453 485 240.0 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 SMART SM00671 202 237 21.0 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 SMART SM00671 238 269 170.0 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 SMART SM00671 356 388 10.0 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 SMART SM00671 421 452 37.0 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 SUPERFAMILY SSF81901 332 479 2.22E-14 T 22-04-2016 AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 SMART SM00028 325 358 69.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 SMART SM00028 238 271 28.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 SMART SM00028 143 176 20.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 SMART SM00028 421 454 310.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 Pfam PF13432 Tetratricopeptide repeat 337 385 0.0029 T 22-04-2016 AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 Gene3D G3DSA:1.25.40.10 330 481 3.9E-21 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 Gene3D G3DSA:1.25.40.10 144 291 1.3E-18 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 PANTHER PTHR11102 153 264 5.5E-21 T 22-04-2016 AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 PANTHER PTHR11102 58 109 5.5E-21 T 22-04-2016 AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 PANTHER PTHR11102 351 476 5.5E-21 T 22-04-2016 AMK43_RS06080 afcb0e57b53bed8f22c67ffef0bf85f6 504 SUPERFAMILY SSF81901 150 281 2.62E-15 T 22-04-2016 AMK43_RS04865 352a7fc88364b3c385d568c2c3eaabf5 257 PANTHER PTHR14859:SF0 23 256 4.4E-25 T 22-04-2016 AMK43_RS04865 352a7fc88364b3c385d568c2c3eaabf5 257 Gene3D G3DSA:3.60.10.10 20 197 1.6E-13 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK43_RS04865 352a7fc88364b3c385d568c2c3eaabf5 257 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 28 220 1.7E-13 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK43_RS04865 352a7fc88364b3c385d568c2c3eaabf5 257 SUPERFAMILY SSF56219 14 254 4.19E-31 T 22-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase AMK43_RS04865 352a7fc88364b3c385d568c2c3eaabf5 257 PANTHER PTHR14859 23 256 4.4E-25 T 22-04-2016 IPR027317 PGAP2-interacting protein AMK43_RS06620 daef20c23ebb4885048cec5071603217 325 PANTHER PTHR28283 5 325 4.9E-73 T 22-04-2016 AMK43_RS06620 daef20c23ebb4885048cec5071603217 325 PIRSF PIRSF000962 2 325 2.0E-88 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 AMK43_RS06620 daef20c23ebb4885048cec5071603217 325 SUPERFAMILY SSF56281 49 299 2.49E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS06620 daef20c23ebb4885048cec5071603217 325 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 122 143 1.9E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 AMK43_RS06620 daef20c23ebb4885048cec5071603217 325 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 231 242 1.9E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 AMK43_RS06620 daef20c23ebb4885048cec5071603217 325 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 250 263 1.9E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 AMK43_RS06620 daef20c23ebb4885048cec5071603217 325 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 276 287 1.9E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 AMK43_RS06620 daef20c23ebb4885048cec5071603217 325 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 95 113 1.9E-29 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 AMK43_RS06620 daef20c23ebb4885048cec5071603217 325 PANTHER PTHR28283:SF1 5 325 4.9E-73 T 22-04-2016 AMK43_RS06620 daef20c23ebb4885048cec5071603217 325 Gene3D G3DSA:3.60.15.10 21 277 2.1E-25 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS06620 daef20c23ebb4885048cec5071603217 325 Pfam PF02112 cAMP phosphodiesterases class-II 21 306 1.2E-49 T 22-04-2016 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 708 744 2.7E-11 T 22-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 SMART SM00436 103 191 3.7E-50 T 22-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 464 478 2.3E-31 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 365 381 2.3E-31 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 161 179 2.3E-31 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 289 298 2.3E-31 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 2.3E-31 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 Pfam PF01751 Toprim domain 5 112 1.0E-30 T 22-04-2016 IPR006171 Toprim domain AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 PANTHER PTHR11390:SF27 1 575 6.1E-281 T 22-04-2016 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 276 298 - T 22-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 SUPERFAMILY SSF56712 3 552 6.28E-180 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 SUPERFAMILY SSF56712 708 716 6.28E-180 T 22-04-2016 IPR023405 DNA topoisomerase, type IA, core domain AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 PANTHER PTHR11390:SF27 706 742 6.1E-281 T 22-04-2016 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 596 7.9E-222 T 22-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 Gene3D G3DSA:3.40.50.140 3 133 1.3E-45 T 22-04-2016 IPR006171 Toprim domain AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 PANTHER PTHR11390 1 575 6.1E-281 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 PANTHER PTHR11390 706 742 6.1E-281 T 22-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 Gene3D G3DSA:1.10.460.10 134 181 1.5E-55 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 Gene3D G3DSA:1.10.460.10 708 712 1.5E-55 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 Gene3D G3DSA:1.10.460.10 447 552 1.5E-55 T 22-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 722 49.476 T 22-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 Gene3D G3DSA:2.70.20.10 183 309 4.4E-27 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 Gene3D G3DSA:2.70.20.10 313 446 2.8E-20 T 22-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 Pfam PF01131 DNA topoisomerase 127 538 4.2E-125 T 22-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 SMART SM00493 3 103 7.6E-33 T 22-04-2016 IPR006171 Toprim domain AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 Gene3D G3DSA:3.30.65.10 713 746 6.9E-17 T 22-04-2016 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 SUPERFAMILY SSF57783 708 746 1.36E-11 T 22-04-2016 AMK43_RS05030 caef42b335d65c2bf4283d1dfefe1ff4 808 SMART SM00437 239 501 3.8E-95 T 22-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 AMK43_RS07495 e2445e009013477b59c4940776ded674 239 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 4 235 1.5E-83 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like AMK43_RS07495 e2445e009013477b59c4940776ded674 239 Pfam PF01709 Transcriptional regulator 6 235 1.5E-83 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like AMK43_RS07495 e2445e009013477b59c4940776ded674 239 PANTHER PTHR12532 6 239 6.2E-92 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like AMK43_RS07495 e2445e009013477b59c4940776ded674 239 Gene3D G3DSA:3.30.70.980 131 201 7.4E-24 T 22-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 AMK43_RS07495 e2445e009013477b59c4940776ded674 239 Gene3D G3DSA:1.10.10.200 6 75 6.0E-23 T 22-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like AMK43_RS07495 e2445e009013477b59c4940776ded674 239 SUPERFAMILY SSF75625 4 235 7.98E-82 T 22-04-2016 IPR029072 YebC-like AMK43_RS07495 e2445e009013477b59c4940776ded674 239 Gene3D G3DSA:3.30.1270.10 78 130 1.2E-35 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 AMK43_RS07495 e2445e009013477b59c4940776ded674 239 Gene3D G3DSA:3.30.1270.10 210 236 1.2E-35 T 22-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 AMK43_RS07495 e2445e009013477b59c4940776ded674 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 2 237 30.903 T 22-04-2016 IPR002876 Transcriptional regulator TACO1-like AMK43_RS08060 1955322565aa75d676cae1f914e6bcb4 257 Gene3D G3DSA:3.40.50.720 4 222 3.4E-49 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS08060 1955322565aa75d676cae1f914e6bcb4 257 PIRSF PIRSF000126 2 253 1.2E-51 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08060 1955322565aa75d676cae1f914e6bcb4 257 SUPERFAMILY SSF51735 3 251 2.49E-52 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS08060 1955322565aa75d676cae1f914e6bcb4 257 Pfam PF00106 short chain dehydrogenase 3 192 1.4E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08060 1955322565aa75d676cae1f914e6bcb4 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 1.5E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08060 1955322565aa75d676cae1f914e6bcb4 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 1.5E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08060 1955322565aa75d676cae1f914e6bcb4 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.5E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08060 1955322565aa75d676cae1f914e6bcb4 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.5E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08060 1955322565aa75d676cae1f914e6bcb4 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.5E-18 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08060 1955322565aa75d676cae1f914e6bcb4 257 PANTHER PTHR24322 147 181 4.4E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08060 1955322565aa75d676cae1f914e6bcb4 257 PANTHER PTHR24322 6 131 4.4E-38 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08060 1955322565aa75d676cae1f914e6bcb4 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 9.9E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08060 1955322565aa75d676cae1f914e6bcb4 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 9.9E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08060 1955322565aa75d676cae1f914e6bcb4 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 9.9E-7 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS03630 6f3c319f2815a8858059d35e4afb5c00 321 SUPERFAMILY SSF56235 3 288 4.63E-76 T 22-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal AMK43_RS03630 6f3c319f2815a8858059d35e4afb5c00 321 PANTHER PTHR10188 15 281 8.6E-80 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AMK43_RS03630 6f3c319f2815a8858059d35e4afb5c00 321 Pfam PF01112 Asparaginase 14 282 7.4E-70 T 22-04-2016 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 AMK43_RS02625 5ad51f1e9f99004039d12f1b8c8cfe3c 381 Pfam PF00263 Bacterial type II and III secretion system protein 214 375 1.9E-29 T 22-04-2016 IPR004846 Type II/III secretion system GO:0009306 AMK43_RS02625 5ad51f1e9f99004039d12f1b8c8cfe3c 381 PANTHER PTHR30332 120 376 1.6E-40 T 22-04-2016 AMK43_RS02625 5ad51f1e9f99004039d12f1b8c8cfe3c 381 PRINTS PR00811 Bacterial general secretion pathway protein D signature 149 159 5.4E-8 T 22-04-2016 IPR001775 GspD/PilQ family AMK43_RS02625 5ad51f1e9f99004039d12f1b8c8cfe3c 381 PRINTS PR00811 Bacterial general secretion pathway protein D signature 209 233 5.4E-8 T 22-04-2016 IPR001775 GspD/PilQ family AMK43_RS02625 5ad51f1e9f99004039d12f1b8c8cfe3c 381 PRINTS PR00811 Bacterial general secretion pathway protein D signature 342 360 5.4E-8 T 22-04-2016 IPR001775 GspD/PilQ family AMK43_RS06395 e89fa6620a361d69c20fbe5235e246ff 222 PANTHER PTHR34070:SF1 4 222 5.3E-53 T 22-04-2016 AMK43_RS06395 e89fa6620a361d69c20fbe5235e246ff 222 SUPERFAMILY SSF48371 11 222 3.7E-52 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMK43_RS06395 e89fa6620a361d69c20fbe5235e246ff 222 Pfam PF08713 DNA alkylation repair enzyme 9 222 1.7E-65 T 22-04-2016 IPR014825 DNA alkylation repair enzyme AMK43_RS06395 e89fa6620a361d69c20fbe5235e246ff 222 PANTHER PTHR34070 4 222 5.3E-53 T 22-04-2016 AMK43_RS06395 e89fa6620a361d69c20fbe5235e246ff 222 Gene3D G3DSA:1.25.40.290 128 222 5.5E-41 T 22-04-2016 AMK43_RS06950 a7e2d1c4292d8096616eb881134b88e2 222 PANTHER PTHR21666:SF210 103 217 2.8E-32 T 22-04-2016 AMK43_RS06950 a7e2d1c4292d8096616eb881134b88e2 222 PANTHER PTHR21666 103 217 2.8E-32 T 22-04-2016 AMK43_RS06950 a7e2d1c4292d8096616eb881134b88e2 222 SUPERFAMILY SSF54001 101 217 1.44E-32 T 22-04-2016 AMK43_RS06950 a7e2d1c4292d8096616eb881134b88e2 222 Pfam PF00877 NlpC/P60 family 112 215 8.2E-26 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK43_RS06950 a7e2d1c4292d8096616eb881134b88e2 222 Gene3D G3DSA:3.90.1720.10 101 217 4.4E-37 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK43_RS09155 cfd7d3342b3a2a217daad5111489c4d3 472 Pfam PF00171 Aldehyde dehydrogenase family 11 468 5.1E-147 T 22-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 AMK43_RS09155 cfd7d3342b3a2a217daad5111489c4d3 472 SUPERFAMILY SSF53720 2 471 6.94E-141 T 22-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 AMK43_RS09155 cfd7d3342b3a2a217daad5111489c4d3 472 PANTHER PTHR11699:SF160 1 472 1.7E-295 T 22-04-2016 AMK43_RS09155 cfd7d3342b3a2a217daad5111489c4d3 472 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 22-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 AMK43_RS09155 cfd7d3342b3a2a217daad5111489c4d3 472 PANTHER PTHR11699 1 472 1.7E-295 T 22-04-2016 AMK43_RS09155 cfd7d3342b3a2a217daad5111489c4d3 472 Gene3D G3DSA:3.40.309.10 263 442 1.3E-62 T 22-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 AMK43_RS09155 cfd7d3342b3a2a217daad5111489c4d3 472 Gene3D G3DSA:3.40.605.10 2 262 4.7E-86 T 22-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 AMK43_RS04695 717bd0cd256c6ba81f2bc8f3dbc899f6 252 PANTHER PTHR13939 1 251 1.3E-89 T 22-04-2016 AMK43_RS04695 717bd0cd256c6ba81f2bc8f3dbc899f6 252 Gene3D G3DSA:3.40.980.10 130 171 5.9E-37 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS04695 717bd0cd256c6ba81f2bc8f3dbc899f6 252 Gene3D G3DSA:3.40.980.10 1 86 5.9E-37 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS04695 717bd0cd256c6ba81f2bc8f3dbc899f6 252 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 164 5.0E-28 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS04695 717bd0cd256c6ba81f2bc8f3dbc899f6 252 SMART SM00852 4 171 6.1E-30 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS04695 717bd0cd256c6ba81f2bc8f3dbc899f6 252 PANTHER PTHR13939:SF0 1 251 1.3E-89 T 22-04-2016 AMK43_RS04695 717bd0cd256c6ba81f2bc8f3dbc899f6 252 Pfam PF00994 Probable molybdopterin binding domain 4 169 6.0E-35 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS04695 717bd0cd256c6ba81f2bc8f3dbc899f6 252 SUPERFAMILY SSF53218 1 174 3.4E-38 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS04380 55fa8323dd8f0ebf6f4860010a2b05a8 91 Pfam PF01725 Ham1 family 4 85 1.1E-19 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMK43_RS04380 55fa8323dd8f0ebf6f4860010a2b05a8 91 Gene3D G3DSA:3.90.950.10 2 87 1.7E-26 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMK43_RS04380 55fa8323dd8f0ebf6f4860010a2b05a8 91 PANTHER PTHR11067:SF9 1 85 8.1E-23 T 22-04-2016 AMK43_RS04380 55fa8323dd8f0ebf6f4860010a2b05a8 91 SUPERFAMILY SSF52972 2 87 5.76E-24 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMK43_RS04380 55fa8323dd8f0ebf6f4860010a2b05a8 91 PANTHER PTHR11067 1 85 8.1E-23 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMK43_RS09340 44c5ebb2ded6bd49d72a9ede93ab98dc 399 PANTHER PTHR15184 40 377 6.4E-146 T 22-04-2016 AMK43_RS09340 44c5ebb2ded6bd49d72a9ede93ab98dc 399 Gene3D G3DSA:3.40.50.300 131 390 1.1E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09340 44c5ebb2ded6bd49d72a9ede93ab98dc 399 PANTHER PTHR15184:SF34 40 377 6.4E-146 T 22-04-2016 AMK43_RS09340 44c5ebb2ded6bd49d72a9ede93ab98dc 399 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 396 164.582 T 22-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 AMK43_RS09340 44c5ebb2ded6bd49d72a9ede93ab98dc 399 SUPERFAMILY SSF50249 34 104 1.34E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS09340 44c5ebb2ded6bd49d72a9ede93ab98dc 399 SMART SM00382 145 331 4.7E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS09340 44c5ebb2ded6bd49d72a9ede93ab98dc 399 Pfam PF07497 Rho termination factor, RNA-binding domain 37 104 6.3E-14 T 22-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 AMK43_RS09340 44c5ebb2ded6bd49d72a9ede93ab98dc 399 Gene3D G3DSA:2.40.50.140 1 105 1.4E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS09340 44c5ebb2ded6bd49d72a9ede93ab98dc 399 SUPERFAMILY SSF52540 106 347 1.65E-59 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09340 44c5ebb2ded6bd49d72a9ede93ab98dc 399 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 339 4.5E-19 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS02145 f03fa5e1e67986a5c4c14c0304a849f1 269 PIRSF PIRSF004976 2 266 1.3E-68 T 22-04-2016 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 AMK43_RS02145 f03fa5e1e67986a5c4c14c0304a849f1 269 PANTHER PTHR11807:SF16 1 266 1.1E-79 T 22-04-2016 AMK43_RS02145 f03fa5e1e67986a5c4c14c0304a849f1 269 Gene3D G3DSA:3.40.50.620 20 201 3.9E-22 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS02145 f03fa5e1e67986a5c4c14c0304a849f1 269 Pfam PF01171 PP-loop family 39 201 1.8E-17 T 22-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal AMK43_RS02145 f03fa5e1e67986a5c4c14c0304a849f1 269 PANTHER PTHR11807 1 266 1.1E-79 T 22-04-2016 AMK43_RS02145 f03fa5e1e67986a5c4c14c0304a849f1 269 SUPERFAMILY SSF52402 15 231 3.09E-45 T 22-04-2016 AMK43_RS06760 bccd57256e87017867ce167cccc86123 288 Pfam PF03193 Protein of unknown function, DUF258 57 223 3.7E-47 T 22-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 AMK43_RS06760 bccd57256e87017867ce167cccc86123 288 Gene3D G3DSA:1.10.40.50 229 285 6.5E-21 T 22-04-2016 AMK43_RS06760 bccd57256e87017867ce167cccc86123 288 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 1 288 30.737 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 AMK43_RS06760 bccd57256e87017867ce167cccc86123 288 Pfam PF16745 RsgA N-terminal domain 2 51 1.7E-8 T 22-04-2016 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal AMK43_RS06760 bccd57256e87017867ce167cccc86123 288 Gene3D G3DSA:2.40.50.140 1 56 3.3E-11 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS06760 bccd57256e87017867ce167cccc86123 288 SUPERFAMILY SSF52540 63 284 1.87E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06760 bccd57256e87017867ce167cccc86123 288 Gene3D G3DSA:3.40.50.300 63 222 1.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06760 bccd57256e87017867ce167cccc86123 288 PANTHER PTHR32120 20 279 6.1E-79 T 22-04-2016 AMK43_RS06760 bccd57256e87017867ce167cccc86123 288 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 280 4.8E-63 T 22-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 AMK43_RS02950 fb97823977b82c6f34bf551c3b8ccaf0 327 Gene3D G3DSA:3.20.20.210 28 325 3.2E-57 T 22-04-2016 AMK43_RS02950 fb97823977b82c6f34bf551c3b8ccaf0 327 PANTHER PTHR21091 124 322 1.4E-27 T 22-04-2016 AMK43_RS02950 fb97823977b82c6f34bf551c3b8ccaf0 327 PANTHER PTHR21091:SF117 124 322 1.4E-27 T 22-04-2016 AMK43_RS02950 fb97823977b82c6f34bf551c3b8ccaf0 327 SUPERFAMILY SSF51726 30 325 6.15E-60 T 22-04-2016 AMK43_RS02950 fb97823977b82c6f34bf551c3b8ccaf0 327 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 28 323 8.3E-56 T 22-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 AMK43_RS04655 60df5d106e8d1e9072605a6371edb748 354 Pfam PF00005 ABC transporter 23 185 1.2E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS04655 60df5d106e8d1e9072605a6371edb748 354 PANTHER PTHR24220 4 266 6.1E-128 T 22-04-2016 AMK43_RS04655 60df5d106e8d1e9072605a6371edb748 354 Pfam PF09383 NIL domain 283 353 3.1E-17 T 22-04-2016 IPR018449 NIL domain AMK43_RS04655 60df5d106e8d1e9072605a6371edb748 354 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS04655 60df5d106e8d1e9072605a6371edb748 354 Gene3D G3DSA:3.40.50.300 2 252 2.1E-81 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04655 60df5d106e8d1e9072605a6371edb748 354 SMART SM00382 32 234 1.4E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS04655 60df5d106e8d1e9072605a6371edb748 354 PANTHER PTHR24220:SF186 4 266 6.1E-128 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 AMK43_RS04655 60df5d106e8d1e9072605a6371edb748 354 SMART SM00930 279 354 9.3E-20 T 22-04-2016 IPR018449 NIL domain AMK43_RS04655 60df5d106e8d1e9072605a6371edb748 354 Gene3D G3DSA:3.30.70.260 253 354 5.0E-23 T 22-04-2016 AMK43_RS04655 60df5d106e8d1e9072605a6371edb748 354 SUPERFAMILY SSF55021 275 354 2.63E-17 T 22-04-2016 AMK43_RS04655 60df5d106e8d1e9072605a6371edb748 354 SUPERFAMILY SSF52540 3 256 5.75E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 301 774 1.2E-111 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 Gene3D G3DSA:1.10.150.120 72 163 5.1E-27 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 SUPERFAMILY SSF54292 2 75 5.64E-20 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 PANTHER PTHR11908:SF91 101 832 2.0E-278 T 22-04-2016 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 PANTHER PTHR11908 101 832 2.0E-278 T 22-04-2016 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 Gene3D G3DSA:3.30.365.10 717 846 1.3E-34 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 Gene3D G3DSA:3.30.365.10 511 589 1.3E-34 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 Pfam PF01799 [2Fe-2S] binding domain 70 141 1.7E-22 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 TIGRFAM TIGR03311 Se_dep_XDH: selenium-dependent xanthine dehydrogenase 2 853 0.0 T 22-04-2016 IPR017697 Selenium-dependent xanthine dehydrogenase AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 SMART SM01008 177 284 1.1E-27 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 SUPERFAMILY SSF47741 70 151 3.66E-26 T 22-04-2016 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 4 54 5.9E-6 T 22-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 SUPERFAMILY SSF56003 288 846 2.09E-140 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 36 44 - T 22-04-2016 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 Gene3D G3DSA:3.30.365.10 326 432 8.4E-32 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 SUPERFAMILY SSF54665 141 285 7.33E-32 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 Gene3D G3DSA:3.30.365.10 273 325 1.1E-34 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 Gene3D G3DSA:3.30.365.10 435 509 1.1E-34 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 178 283 7.1E-18 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 Gene3D G3DSA:3.10.20.30 2 71 1.6E-24 T 22-04-2016 IPR012675 Beta-grasp domain AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 Gene3D G3DSA:3.30.365.10 592 683 8.9E-25 T 22-04-2016 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 AMK43_RS04745 fc832304f01889b6947434a73ff62dff 857 Gene3D G3DSA:3.90.1170.50 164 272 2.1E-31 T 22-04-2016 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead AMK43_RS10825 4480dfd73a14495f081d01e0839a79ed 274 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 3 268 17.932 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMK43_RS10825 4480dfd73a14495f081d01e0839a79ed 274 Pfam PF02673 Bacitracin resistance protein BacA 9 263 5.7E-81 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMK43_RS10825 4480dfd73a14495f081d01e0839a79ed 274 PANTHER PTHR30622 1 267 1.7E-111 T 22-04-2016 AMK43_RS10825 4480dfd73a14495f081d01e0839a79ed 274 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 261 6.2E-74 T 22-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 AMK43_RS10825 4480dfd73a14495f081d01e0839a79ed 274 PANTHER PTHR30622:SF5 1 267 1.7E-111 T 22-04-2016 AMK43_RS00615 ada3d4bce7a9eb97fc85a24652e41892 666 Gene3D G3DSA:3.90.1310.10 161 249 3.0E-16 T 22-04-2016 AMK43_RS00615 ada3d4bce7a9eb97fc85a24652e41892 666 Pfam PF03793 PASTA domain 612 665 3.5E-9 T 22-04-2016 IPR005543 PASTA domain AMK43_RS00615 ada3d4bce7a9eb97fc85a24652e41892 666 SMART SM00740 607 666 8.0E-7 T 22-04-2016 IPR005543 PASTA domain AMK43_RS00615 ada3d4bce7a9eb97fc85a24652e41892 666 Gene3D G3DSA:3.40.710.10 250 576 1.5E-86 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS00615 ada3d4bce7a9eb97fc85a24652e41892 666 PANTHER PTHR30627 6 610 1.2E-151 T 22-04-2016 AMK43_RS00615 ada3d4bce7a9eb97fc85a24652e41892 666 SUPERFAMILY SSF56601 192 580 9.2E-89 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS00615 ada3d4bce7a9eb97fc85a24652e41892 666 SUPERFAMILY SSF54184 612 665 4.97E-8 T 22-04-2016 AMK43_RS00615 ada3d4bce7a9eb97fc85a24652e41892 666 Pfam PF00905 Penicillin binding protein transpeptidase domain 271 570 8.6E-65 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMK43_RS00615 ada3d4bce7a9eb97fc85a24652e41892 666 PANTHER PTHR30627:SF1 6 610 1.2E-151 T 22-04-2016 AMK43_RS00615 ada3d4bce7a9eb97fc85a24652e41892 666 SUPERFAMILY SSF56519 63 242 6.8E-25 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMK43_RS00615 ada3d4bce7a9eb97fc85a24652e41892 666 Pfam PF03717 Penicillin-binding Protein dimerisation domain 67 216 3.8E-13 T 22-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 AMK43_RS07705 4ece69e20b942f998ebf6a34d1593046 459 PIRSF PIRSF006603 5 457 1.1E-68 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS07705 4ece69e20b942f998ebf6a34d1593046 459 TIGRFAM TIGR00797 matE: MATE efflux family protein 30 417 2.2E-44 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS07705 4ece69e20b942f998ebf6a34d1593046 459 PANTHER PTHR11206:SF132 9 446 1.2E-47 T 22-04-2016 AMK43_RS07705 4ece69e20b942f998ebf6a34d1593046 459 PANTHER PTHR11206 9 446 1.2E-47 T 22-04-2016 AMK43_RS07705 4ece69e20b942f998ebf6a34d1593046 459 Pfam PF01554 MatE 30 187 2.1E-10 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS07705 4ece69e20b942f998ebf6a34d1593046 459 Pfam PF01554 MatE 250 408 3.3E-23 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS00800 bde5dd62453c98d7005e3846a17187e5 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 294 313 9.7E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00800 bde5dd62453c98d7005e3846a17187e5 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 149 168 9.7E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00800 bde5dd62453c98d7005e3846a17187e5 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 239 255 9.7E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00800 bde5dd62453c98d7005e3846a17187e5 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 187 206 9.7E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00800 bde5dd62453c98d7005e3846a17187e5 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 118 132 9.7E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00800 bde5dd62453c98d7005e3846a17187e5 323 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 264 279 9.7E-56 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00800 bde5dd62453c98d7005e3846a17187e5 323 SMART SM01004 1 320 1.1E-205 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00800 bde5dd62453c98d7005e3846a17187e5 323 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 239 251 - T 22-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00800 bde5dd62453c98d7005e3846a17187e5 323 PANTHER PTHR11458 4 322 5.6E-175 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00800 bde5dd62453c98d7005e3846a17187e5 323 PIRSF PIRSF001415 1 323 1.4E-143 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00800 bde5dd62453c98d7005e3846a17187e5 323 Gene3D G3DSA:3.20.20.70 2 322 7.2E-145 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS00800 bde5dd62453c98d7005e3846a17187e5 323 Pfam PF00490 Delta-aminolevulinic acid dehydratase 3 318 9.8E-143 T 22-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00800 bde5dd62453c98d7005e3846a17187e5 323 SUPERFAMILY SSF51569 2 322 1.47E-136 T 22-04-2016 AMK43_RS08455 f5f0240059a7f3243b00176a029c4a2d 164 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 3 115 1.4E-13 T 22-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA AMK43_RS08455 f5f0240059a7f3243b00176a029c4a2d 164 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 2 154 2.8E-54 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK43_RS08455 f5f0240059a7f3243b00176a029c4a2d 164 PANTHER PTHR21485 2 156 7.4E-51 T 22-04-2016 AMK43_RS08455 f5f0240059a7f3243b00176a029c4a2d 164 SUPERFAMILY SSF56784 1 162 2.89E-40 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS08455 f5f0240059a7f3243b00176a029c4a2d 164 Pfam PF08282 haloacid dehalogenase-like hydrolase 77 140 6.6E-10 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS08455 f5f0240059a7f3243b00176a029c4a2d 164 Gene3D G3DSA:3.40.50.1000 1 163 7.5E-43 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS08455 f5f0240059a7f3243b00176a029c4a2d 164 PIRSF PIRSF006118 1 164 1.5E-63 T 22-04-2016 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK43_RS07405 2fb6b64a834ced6d22fa8c5e8d188c96 276 SUPERFAMILY SSF53448 2 255 1.13E-35 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS07405 2fb6b64a834ced6d22fa8c5e8d188c96 276 Gene3D G3DSA:3.90.550.10 2 226 4.4E-31 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS07405 2fb6b64a834ced6d22fa8c5e8d188c96 276 Pfam PF00535 Glycosyl transferase family 2 4 120 1.9E-24 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK43_RS07405 2fb6b64a834ced6d22fa8c5e8d188c96 276 PANTHER PTHR22916 2 276 2.6E-26 T 22-04-2016 AMK43_RS10820 34b7f2569145552a011f3079475ae0d2 489 PANTHER PTHR13932:SF1 102 482 1.3E-134 T 22-04-2016 AMK43_RS10820 34b7f2569145552a011f3079475ae0d2 489 SUPERFAMILY SSF102114 155 464 4.71E-64 T 22-04-2016 AMK43_RS10820 34b7f2569145552a011f3079475ae0d2 489 Gene3D G3DSA:3.80.30.20 158 391 4.2E-40 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMK43_RS10820 34b7f2569145552a011f3079475ae0d2 489 Pfam PF04055 Radical SAM superfamily 164 336 1.1E-20 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS10820 34b7f2569145552a011f3079475ae0d2 489 SMART SM00729 156 377 8.0E-42 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK43_RS10820 34b7f2569145552a011f3079475ae0d2 489 TIGRFAM TIGR03994 rSAM_HemZ: coproporphyrinogen dehydrogenase HemZ 92 476 1.1E-123 T 22-04-2016 IPR023995 Coproporphyrinogen III oxidase KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00251 AMK43_RS10820 34b7f2569145552a011f3079475ae0d2 489 PANTHER PTHR13932 102 482 1.3E-134 T 22-04-2016 AMK43_RS03725 a2868ffa2ae58c051f6e7a972ade34dc 228 SUPERFAMILY SSF56037 73 211 2.88E-18 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK43_RS03725 a2868ffa2ae58c051f6e7a972ade34dc 228 Gene3D G3DSA:3.50.40.10 73 195 2.1E-14 T 22-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 AMK43_RS03725 a2868ffa2ae58c051f6e7a972ade34dc 228 Pfam PF03483 B3/4 domain 67 199 9.3E-19 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMK43_RS03725 a2868ffa2ae58c051f6e7a972ade34dc 228 SMART SM00873 62 213 3.4E-5 T 22-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 AMK43_RS03725 a2868ffa2ae58c051f6e7a972ade34dc 228 PANTHER PTHR39209 1 228 1.3E-22 T 22-04-2016 AMK43_RS04750 f822f7f8dc1fb7b33aea86bbcedf3f3c 329 Pfam PF00994 Probable molybdopterin binding domain 179 308 5.8E-18 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS04750 f822f7f8dc1fb7b33aea86bbcedf3f3c 329 PANTHER PTHR10192 36 322 9.0E-33 T 22-04-2016 AMK43_RS04750 f822f7f8dc1fb7b33aea86bbcedf3f3c 329 SUPERFAMILY SSF53218 178 310 2.62E-25 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS04750 f822f7f8dc1fb7b33aea86bbcedf3f3c 329 SMART SM00852 179 310 2.2E-13 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS04750 f822f7f8dc1fb7b33aea86bbcedf3f3c 329 PANTHER PTHR10192:SF13 36 322 9.0E-33 T 22-04-2016 AMK43_RS04750 f822f7f8dc1fb7b33aea86bbcedf3f3c 329 Gene3D G3DSA:3.40.980.10 171 309 1.9E-25 T 22-04-2016 IPR001453 MoaB/Mog domain AMK43_RS06550 ee49a04858f3be740976910d41aad8a7 332 Pfam PF00586 AIR synthase related protein, N-terminal domain 55 159 6.4E-16 T 22-04-2016 IPR016188 PurM-like, N-terminal domain AMK43_RS06550 ee49a04858f3be740976910d41aad8a7 332 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 3 324 3.8E-132 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK43_RS06550 ee49a04858f3be740976910d41aad8a7 332 Gene3D G3DSA:3.90.650.10 167 328 1.1E-56 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK43_RS06550 ee49a04858f3be740976910d41aad8a7 332 Pfam PF02769 AIR synthase related protein, C-terminal domain 171 326 2.6E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK43_RS06550 ee49a04858f3be740976910d41aad8a7 332 SUPERFAMILY SSF56042 166 328 4.04E-50 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK43_RS06550 ee49a04858f3be740976910d41aad8a7 332 PANTHER PTHR10520 3 322 8.0E-176 T 22-04-2016 AMK43_RS06550 ee49a04858f3be740976910d41aad8a7 332 Gene3D G3DSA:3.30.1330.10 19 164 2.1E-59 T 22-04-2016 IPR016188 PurM-like, N-terminal domain AMK43_RS06550 ee49a04858f3be740976910d41aad8a7 332 SUPERFAMILY SSF55326 2 164 5.08E-49 T 22-04-2016 AMK43_RS06550 ee49a04858f3be740976910d41aad8a7 332 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 331 43.733 T 22-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 AMK43_RS06725 e7030045d93d737588170c1e75435e17 144 Gene3D G3DSA:3.40.1400.10 1 142 7.5E-63 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMK43_RS06725 e7030045d93d737588170c1e75435e17 144 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 142 2.9E-54 T 22-04-2016 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 AMK43_RS06725 e7030045d93d737588170c1e75435e17 144 PIRSF PIRSF005384 1 144 9.7E-58 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMK43_RS06725 e7030045d93d737588170c1e75435e17 144 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 142 7.8E-55 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMK43_RS06725 e7030045d93d737588170c1e75435e17 144 PANTHER PTHR30345 1 142 1.1E-74 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMK43_RS06725 e7030045d93d737588170c1e75435e17 144 Pfam PF02502 Ribose/Galactose Isomerase 3 140 1.1E-58 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMK43_RS06725 e7030045d93d737588170c1e75435e17 144 SUPERFAMILY SSF89623 1 142 5.62E-58 T 22-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 AMK43_RS00910 a6763bed595a849490a070487bdfe4e8 160 SUPERFAMILY SSF55729 1 149 1.36E-18 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS00910 a6763bed595a849490a070487bdfe4e8 160 Gene3D G3DSA:3.40.630.30 1 149 3.2E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS00910 a6763bed595a849490a070487bdfe4e8 160 Pfam PF00583 Acetyltransferase (GNAT) family 54 143 5.0E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS09170 7d8f18a60eb394e91690fb6ff5c6a0bc 299 PANTHER PTHR24220:SF66 5 242 1.1E-82 T 22-04-2016 AMK43_RS09170 7d8f18a60eb394e91690fb6ff5c6a0bc 299 Pfam PF00005 ABC transporter 21 174 8.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS09170 7d8f18a60eb394e91690fb6ff5c6a0bc 299 SMART SM00382 30 222 1.0E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS09170 7d8f18a60eb394e91690fb6ff5c6a0bc 299 SUPERFAMILY SSF52540 4 236 1.66E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09170 7d8f18a60eb394e91690fb6ff5c6a0bc 299 PANTHER PTHR24220 5 242 1.1E-82 T 22-04-2016 AMK43_RS09170 7d8f18a60eb394e91690fb6ff5c6a0bc 299 Gene3D G3DSA:3.40.50.300 5 237 3.5E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 Gene3D G3DSA:3.40.50.300 6 55 6.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 Gene3D G3DSA:3.40.50.300 340 448 6.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 Gene3D G3DSA:3.40.50.300 108 169 6.2E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 PANTHER PTHR11070 8 68 1.7E-60 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 PANTHER PTHR11070 722 785 1.7E-60 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 PANTHER PTHR11070 100 194 1.7E-60 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 PANTHER PTHR11070 820 841 1.7E-60 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 PANTHER PTHR11070 305 685 1.7E-60 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 Pfam PF13361 UvrD-like helicase C-terminal domain 456 841 2.6E-22 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 447 3.1E-45 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 SUPERFAMILY SSF52540 646 771 2.02E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 SUPERFAMILY SSF52540 7 59 2.02E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 SUPERFAMILY SSF52540 821 846 2.02E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 SUPERFAMILY SSF52540 330 590 2.02E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 SUPERFAMILY SSF52540 100 156 2.02E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 Gene3D G3DSA:3.40.50.300 737 867 6.0E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02360 54f7619c62bfd07201df8c9fe30682b9 1061 Gene3D G3DSA:3.40.50.300 458 560 6.0E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08040 2bccf0c0ef80f79fa2dce250a927c07e 327 SUPERFAMILY SSF51735 1 321 5.48E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS08040 2bccf0c0ef80f79fa2dce250a927c07e 327 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 223 4.1E-33 T 22-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 AMK43_RS08040 2bccf0c0ef80f79fa2dce250a927c07e 327 Gene3D G3DSA:3.40.50.720 1 244 5.4E-56 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS08040 2bccf0c0ef80f79fa2dce250a927c07e 327 Gene3D G3DSA:3.90.25.10 296 323 7.8E-4 T 22-04-2016 AMK43_RS08040 2bccf0c0ef80f79fa2dce250a927c07e 327 PANTHER PTHR10366 271 318 1.5E-61 T 22-04-2016 AMK43_RS08040 2bccf0c0ef80f79fa2dce250a927c07e 327 PANTHER PTHR10366 2 247 1.5E-61 T 22-04-2016 AMK43_RS03320 c7c3359d07662a32fec27736700258dc 422 PANTHER PTHR21090:SF19 7 418 1.6E-181 T 22-04-2016 AMK43_RS03320 c7c3359d07662a32fec27736700258dc 422 SUPERFAMILY SSF55205 5 418 2.29E-128 T 22-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 AMK43_RS03320 c7c3359d07662a32fec27736700258dc 422 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 408 3.7E-102 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK43_RS03320 c7c3359d07662a32fec27736700258dc 422 Gene3D G3DSA:3.65.10.10 22 221 3.2E-60 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK43_RS03320 c7c3359d07662a32fec27736700258dc 422 PANTHER PTHR21090 7 418 1.6E-181 T 22-04-2016 AMK43_RS03320 c7c3359d07662a32fec27736700258dc 422 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 2 418 43.075 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS03320 c7c3359d07662a32fec27736700258dc 422 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4 417 1.2E-166 T 22-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS03320 c7c3359d07662a32fec27736700258dc 422 Gene3D G3DSA:3.65.10.10 222 418 1.3E-60 T 22-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 AMK43_RS08570 b71543f9366fbac9e791aeefc17c9f55 87 PANTHER PTHR33705:SF2 1 87 2.7E-27 T 22-04-2016 AMK43_RS08570 b71543f9366fbac9e791aeefc17c9f55 87 SUPERFAMILY SSF55594 1 87 3.4E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS08570 b71543f9366fbac9e791aeefc17c9f55 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.3E-24 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS08570 b71543f9366fbac9e791aeefc17c9f55 87 PANTHER PTHR33705 1 87 2.7E-27 T 22-04-2016 AMK43_RS08570 b71543f9366fbac9e791aeefc17c9f55 87 Gene3D G3DSA:3.30.1340.10 1 87 1.7E-26 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS08570 b71543f9366fbac9e791aeefc17c9f55 87 Pfam PF00381 PTS HPr component phosphorylation site 3 81 3.1E-21 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS08570 b71543f9366fbac9e791aeefc17c9f55 87 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.8E-12 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS08570 b71543f9366fbac9e791aeefc17c9f55 87 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.8E-12 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS08570 b71543f9366fbac9e791aeefc17c9f55 87 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.8E-12 T 22-04-2016 IPR000032 Phosphocarrier HPr protein-like AMK43_RS01645 f0b26ddb77c98b1852f44e87e6d0e6f1 405 SUPERFAMILY SSF53686 12 396 1.09E-144 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK43_RS01645 f0b26ddb77c98b1852f44e87e6d0e6f1 405 Gene3D G3DSA:3.40.50.1100 184 401 2.5E-84 T 22-04-2016 AMK43_RS01645 f0b26ddb77c98b1852f44e87e6d0e6f1 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 385 2.4E-49 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK43_RS01645 f0b26ddb77c98b1852f44e87e6d0e6f1 405 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 14 395 1.9E-189 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK43_RS01645 f0b26ddb77c98b1852f44e87e6d0e6f1 405 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 87 101 - T 22-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK43_RS01645 f0b26ddb77c98b1852f44e87e6d0e6f1 405 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 9 398 50.582 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK43_RS01645 f0b26ddb77c98b1852f44e87e6d0e6f1 405 PANTHER PTHR10314:SF3 14 394 2.2E-212 T 22-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK43_RS01645 f0b26ddb77c98b1852f44e87e6d0e6f1 405 PANTHER PTHR10314 14 394 2.2E-212 T 22-04-2016 AMK43_RS01645 f0b26ddb77c98b1852f44e87e6d0e6f1 405 PIRSF PIRSF001413 1 404 1.8E-170 T 22-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 AMK43_RS01645 f0b26ddb77c98b1852f44e87e6d0e6f1 405 Gene3D G3DSA:3.40.50.1100 104 183 3.7E-19 T 22-04-2016 AMK43_RS01745 2fd4b9538899fd97c74f167075daf3f0 197 ProSitePatterns PS01236 PdxT/SNO family family signature. 46 56 - T 22-04-2016 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 AMK43_RS01745 2fd4b9538899fd97c74f167075daf3f0 197 SUPERFAMILY SSF52317 2 194 1.92E-47 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS01745 2fd4b9538899fd97c74f167075daf3f0 197 Pfam PF01174 SNO glutamine amidotransferase family 5 192 2.0E-62 T 22-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 AMK43_RS01745 2fd4b9538899fd97c74f167075daf3f0 197 PIRSF PIRSF005639 1 195 6.5E-69 T 22-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 AMK43_RS01745 2fd4b9538899fd97c74f167075daf3f0 197 Gene3D G3DSA:3.40.50.880 1 195 5.6E-71 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS01745 2fd4b9538899fd97c74f167075daf3f0 197 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 3 190 35.487 T 22-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 AMK43_RS01745 2fd4b9538899fd97c74f167075daf3f0 197 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 2 189 2.4E-71 T 22-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 AMK43_RS01745 2fd4b9538899fd97c74f167075daf3f0 197 PANTHER PTHR31559 1 197 9.1E-82 T 22-04-2016 AMK43_RS01745 2fd4b9538899fd97c74f167075daf3f0 197 PANTHER PTHR31559:SF0 1 197 9.1E-82 T 22-04-2016 AMK43_RS01725 d53e9086edaa31eedd6afab64075e828 343 PANTHER PTHR30472:SF34 1 36 3.9E-113 T 22-04-2016 AMK43_RS01725 d53e9086edaa31eedd6afab64075e828 343 PANTHER PTHR30472:SF34 57 342 3.9E-113 T 22-04-2016 AMK43_RS01725 d53e9086edaa31eedd6afab64075e828 343 Gene3D G3DSA:1.10.3470.10 2 340 4.6E-94 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK43_RS01725 d53e9086edaa31eedd6afab64075e828 343 PANTHER PTHR30472 1 36 3.9E-113 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 AMK43_RS01725 d53e9086edaa31eedd6afab64075e828 343 PANTHER PTHR30472 57 342 3.9E-113 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 AMK43_RS01725 d53e9086edaa31eedd6afab64075e828 343 SUPERFAMILY SSF81345 3 31 5.49E-71 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK43_RS01725 d53e9086edaa31eedd6afab64075e828 343 SUPERFAMILY SSF81345 60 339 5.49E-71 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK43_RS01725 d53e9086edaa31eedd6afab64075e828 343 Pfam PF01032 FecCD transport family 9 338 7.9E-81 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 AMK43_RS02755 7677aa79b1ad8d55e56e3b60b3fcd4d3 548 Pfam PF02378 Phosphotransferase system, EIIC 18 374 1.0E-75 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMK43_RS02755 7677aa79b1ad8d55e56e3b60b3fcd4d3 548 Pfam PF00367 phosphotransferase system, EIIB 475 506 9.6E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMK43_RS02755 7677aa79b1ad8d55e56e3b60b3fcd4d3 548 SUPERFAMILY SSF55604 472 545 2.09E-19 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS02755 7677aa79b1ad8d55e56e3b60b3fcd4d3 548 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 485 502 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMK43_RS02755 7677aa79b1ad8d55e56e3b60b3fcd4d3 548 PANTHER PTHR30009:SF2 149 544 2.1E-171 T 22-04-2016 AMK43_RS02755 7677aa79b1ad8d55e56e3b60b3fcd4d3 548 PANTHER PTHR30009:SF2 10 124 2.1E-171 T 22-04-2016 AMK43_RS02755 7677aa79b1ad8d55e56e3b60b3fcd4d3 548 Gene3D G3DSA:3.30.1360.60 469 546 1.5E-25 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS02755 7677aa79b1ad8d55e56e3b60b3fcd4d3 548 PANTHER PTHR30009 149 544 2.1E-171 T 22-04-2016 AMK43_RS02755 7677aa79b1ad8d55e56e3b60b3fcd4d3 548 PANTHER PTHR30009 10 124 2.1E-171 T 22-04-2016 AMK43_RS02755 7677aa79b1ad8d55e56e3b60b3fcd4d3 548 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 436 532 3.4E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS07880 e037abfea6268523385fbf774f387afc 283 PANTHER PTHR22855:SF17 27 282 1.5E-144 T 22-04-2016 AMK43_RS07880 e037abfea6268523385fbf774f387afc 283 Pfam PF01039 Carboxyl transferase domain 62 243 2.5E-24 T 22-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07880 e037abfea6268523385fbf774f387afc 283 PANTHER PTHR22855 27 282 1.5E-144 T 22-04-2016 AMK43_RS07880 e037abfea6268523385fbf774f387afc 283 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 25 282 5.6E-113 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07880 e037abfea6268523385fbf774f387afc 283 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 38.714 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07880 e037abfea6268523385fbf774f387afc 283 Gene3D G3DSA:3.90.226.10 28 282 5.3E-77 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS07880 e037abfea6268523385fbf774f387afc 283 SUPERFAMILY SSF52096 32 281 3.98E-81 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS07880 e037abfea6268523385fbf774f387afc 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 132 146 3.88E-41 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07880 e037abfea6268523385fbf774f387afc 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 254 263 3.88E-41 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07880 e037abfea6268523385fbf774f387afc 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 203 220 3.88E-41 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07880 e037abfea6268523385fbf774f387afc 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 166 184 3.88E-41 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07880 e037abfea6268523385fbf774f387afc 283 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 232 243 3.88E-41 T 22-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 AMK43_RS07615 56b2af55009c83b71f56530fad2ebf0f 248 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 238 1.1E-47 T 22-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMK43_RS07615 56b2af55009c83b71f56530fad2ebf0f 248 PANTHER PTHR21600:SF19 1 246 7.4E-65 T 22-04-2016 AMK43_RS07615 56b2af55009c83b71f56530fad2ebf0f 248 PANTHER PTHR21600 1 246 7.4E-65 T 22-04-2016 AMK43_RS07615 56b2af55009c83b71f56530fad2ebf0f 248 SUPERFAMILY SSF55120 61 242 3.06E-39 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS07615 56b2af55009c83b71f56530fad2ebf0f 248 Gene3D G3DSA:3.10.290.10 1 57 4.3E-15 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS07615 56b2af55009c83b71f56530fad2ebf0f 248 SMART SM00363 1 59 1.8E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS07615 56b2af55009c83b71f56530fad2ebf0f 248 SUPERFAMILY SSF55174 1 88 8.58E-11 T 22-04-2016 AMK43_RS07615 56b2af55009c83b71f56530fad2ebf0f 248 Pfam PF00849 RNA pseudouridylate synthase 62 206 1.9E-18 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS07615 56b2af55009c83b71f56530fad2ebf0f 248 Pfam PF01479 S4 domain 1 47 1.1E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS07615 56b2af55009c83b71f56530fad2ebf0f 248 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 22-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 SUPERFAMILY SSF53098 349 498 3.22E-7 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 TIGRFAM TIGR00593 pola: DNA polymerase I 5 905 1.1E-259 T 22-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 Gene3D G3DSA:1.10.150.20 193 252 1.7E-29 T 22-04-2016 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 SUPERFAMILY SSF56672 502 905 3.11E-134 T 22-04-2016 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 702 1.7E-66 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 771 782 1.7E-66 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 804 1.7E-66 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 634 656 1.7E-66 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 734 759 1.7E-66 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 709 722 1.7E-66 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 825 841 1.7E-66 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 854 867 1.7E-66 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 672 1.7E-66 T 22-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 Pfam PF00476 DNA polymerase family A 530 905 1.7E-139 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 SMART SM00279 180 215 5.2E-14 T 22-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 Gene3D G3DSA:3.30.70.370 642 690 8.0E-56 T 22-04-2016 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 Gene3D G3DSA:3.30.70.370 799 905 8.0E-56 T 22-04-2016 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 156 5.7E-42 T 22-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 178 271 3.8E-31 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 Gene3D G3DSA:1.10.150.20 691 798 2.8E-27 T 22-04-2016 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 SUPERFAMILY SSF88723 1 156 1.51E-40 T 22-04-2016 IPR029060 PIN domain-like AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 PANTHER PTHR10133 2 908 3.7E-291 T 22-04-2016 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 SMART SM00482 665 871 3.3E-94 T 22-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 Gene3D G3DSA:3.40.50.1010 3 192 8.1E-52 T 22-04-2016 IPR029060 PIN domain-like AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 Gene3D G3DSA:3.30.420.10 410 522 5.1E-15 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 SMART SM00475 2 268 4.6E-105 T 22-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 PANTHER PTHR10133:SF27 2 908 3.7E-291 T 22-04-2016 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 SUPERFAMILY SSF47807 178 289 3.74E-34 T 22-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 AMK43_RS06650 6493f87756486cda8daa7643807e7d43 908 Gene3D G3DSA:1.20.1060.10 524 641 8.4E-40 T 22-04-2016 AMK43_RS00110 ccdf7671f8bd7eeea76c358168d42cf1 460 Pfam PF02436 Conserved carboxylase domain 294 452 2.4E-54 T 22-04-2016 IPR003379 Carboxylase, conserved domain AMK43_RS00110 ccdf7671f8bd7eeea76c358168d42cf1 460 Gene3D G3DSA:1.10.10.60 422 445 4.4E-4 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS00110 ccdf7671f8bd7eeea76c358168d42cf1 460 SUPERFAMILY SSF51569 3 278 1.12E-91 T 22-04-2016 AMK43_RS00110 ccdf7671f8bd7eeea76c358168d42cf1 460 SUPERFAMILY SSF89000 299 449 1.84E-52 T 22-04-2016 AMK43_RS00110 ccdf7671f8bd7eeea76c358168d42cf1 460 Pfam PF00682 HMGL-like 3 269 1.7E-48 T 22-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 AMK43_RS00110 ccdf7671f8bd7eeea76c358168d42cf1 460 PANTHER PTHR18866 1 441 7.1E-225 T 22-04-2016 AMK43_RS00110 ccdf7671f8bd7eeea76c358168d42cf1 460 Gene3D G3DSA:3.20.20.70 3 277 4.4E-117 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS00110 ccdf7671f8bd7eeea76c358168d42cf1 460 PANTHER PTHR18866:SF100 1 441 7.1E-225 T 22-04-2016 AMK43_RS08805 6b3533e715accc7387910863e0aba1e5 257 SUPERFAMILY SSF64438 9 254 5.95E-51 T 22-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic AMK43_RS08805 6b3533e715accc7387910863e0aba1e5 257 Gene3D G3DSA:3.60.140.10 4 254 2.0E-54 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AMK43_RS08805 6b3533e715accc7387910863e0aba1e5 257 PANTHER PTHR30616 46 256 9.1E-53 T 22-04-2016 AMK43_RS08805 6b3533e715accc7387910863e0aba1e5 257 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 40 254 3.6E-43 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AMK43_RS08805 6b3533e715accc7387910863e0aba1e5 257 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 40 252 1.3E-46 T 22-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase AMK43_RS09165 a2bdac331b5c877d828bd8b2718db935 266 PANTHER PTHR24220 5 236 2.4E-72 T 22-04-2016 AMK43_RS09165 a2bdac331b5c877d828bd8b2718db935 266 Gene3D G3DSA:3.40.50.300 4 230 6.0E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09165 a2bdac331b5c877d828bd8b2718db935 266 SMART SM00382 29 214 2.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS09165 a2bdac331b5c877d828bd8b2718db935 266 SUPERFAMILY SSF52540 4 230 3.37E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09165 a2bdac331b5c877d828bd8b2718db935 266 PANTHER PTHR24220:SF66 5 236 2.4E-72 T 22-04-2016 AMK43_RS09165 a2bdac331b5c877d828bd8b2718db935 266 Pfam PF00005 ABC transporter 21 166 1.3E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS05185 ddeea7ff8b8f7cc57763826a8172b091 318 Gene3D G3DSA:3.40.50.150 12 117 5.1E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS05185 ddeea7ff8b8f7cc57763826a8172b091 318 Gene3D G3DSA:3.40.50.150 222 314 5.1E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS05185 ddeea7ff8b8f7cc57763826a8172b091 318 Pfam PF01795 MraW methylase family 11 314 3.9E-115 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS05185 ddeea7ff8b8f7cc57763826a8172b091 318 PANTHER PTHR11265 10 317 5.8E-132 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS05185 ddeea7ff8b8f7cc57763826a8172b091 318 PANTHER PTHR11265:SF0 10 317 5.8E-132 T 22-04-2016 AMK43_RS05185 ddeea7ff8b8f7cc57763826a8172b091 318 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 10 315 1.3E-108 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS05185 ddeea7ff8b8f7cc57763826a8172b091 318 SUPERFAMILY SSF81799 121 219 7.19E-35 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS05185 ddeea7ff8b8f7cc57763826a8172b091 318 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 12 315 36.708 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS05185 ddeea7ff8b8f7cc57763826a8172b091 318 Gene3D G3DSA:1.10.150.170 120 221 2.3E-35 T 22-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS05185 ddeea7ff8b8f7cc57763826a8172b091 318 PIRSF PIRSF004486 7 316 3.4E-109 T 22-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS05185 ddeea7ff8b8f7cc57763826a8172b091 318 SUPERFAMILY SSF53335 11 120 6.23E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS05185 ddeea7ff8b8f7cc57763826a8172b091 318 SUPERFAMILY SSF53335 219 314 6.23E-43 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS08115 4dd63f5327588c5350eb5bcc6dc8ba30 554 PANTHER PTHR21000:SF11 3 550 0.0 T 22-04-2016 AMK43_RS08115 4dd63f5327588c5350eb5bcc6dc8ba30 554 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 2 552 47.032 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK43_RS08115 4dd63f5327588c5350eb5bcc6dc8ba30 554 SUPERFAMILY SSF143975 3 372 1.44E-140 T 22-04-2016 AMK43_RS08115 4dd63f5327588c5350eb5bcc6dc8ba30 554 SUPERFAMILY SSF52016 373 550 4.87E-61 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK43_RS08115 4dd63f5327588c5350eb5bcc6dc8ba30 554 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 120 130 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK43_RS08115 4dd63f5327588c5350eb5bcc6dc8ba30 554 Pfam PF00920 Dehydratase family 32 549 5.3E-223 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK43_RS08115 4dd63f5327588c5350eb5bcc6dc8ba30 554 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 461 472 - T 22-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK43_RS08115 4dd63f5327588c5350eb5bcc6dc8ba30 554 PANTHER PTHR21000 3 550 0.0 T 22-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK43_RS08115 4dd63f5327588c5350eb5bcc6dc8ba30 554 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 15 550 3.5E-242 T 22-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 Gene3D G3DSA:3.50.50.60 118 231 1.8E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 298 4.4E-49 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 SUPERFAMILY SSF51905 239 310 4.8E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 SUPERFAMILY SSF51905 3 155 4.8E-48 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PANTHER PTHR22912:SF48 1 310 5.5E-117 T 22-04-2016 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 Gene3D G3DSA:3.50.50.60 2 117 6.9E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 Gene3D G3DSA:3.50.50.60 247 309 6.9E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 SUPERFAMILY SSF51905 113 231 2.24E-21 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 6.8E-38 T 22-04-2016 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 6.8E-38 T 22-04-2016 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 6.8E-38 T 22-04-2016 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 6.8E-38 T 22-04-2016 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 6.8E-38 T 22-04-2016 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 309 2.4E-104 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 272 290 5.7E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 5.7E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 5.7E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 5.7E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 5.7E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 5.7E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 5.7E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 5.7E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 5.7E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS09775 31aa1c7d29b8f5e6cafc89ece27862d1 314 PANTHER PTHR22912 1 310 5.5E-117 T 22-04-2016 AMK43_RS05555 be5089a387afe088bb8d77061446df72 328 PANTHER PTHR11082 8 326 3.3E-105 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK43_RS05555 be5089a387afe088bb8d77061446df72 328 SUPERFAMILY SSF51395 6 314 6.23E-57 T 22-04-2016 AMK43_RS05555 be5089a387afe088bb8d77061446df72 328 PANTHER PTHR11082:SF29 8 326 3.3E-105 T 22-04-2016 AMK43_RS05555 be5089a387afe088bb8d77061446df72 328 PIRSF PIRSF006621 1 327 4.7E-67 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK43_RS05555 be5089a387afe088bb8d77061446df72 328 Pfam PF01207 Dihydrouridine synthase (Dus) 10 323 4.1E-69 T 22-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK43_RS05555 be5089a387afe088bb8d77061446df72 328 Gene3D G3DSA:3.20.20.70 4 261 5.0E-65 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS05555 be5089a387afe088bb8d77061446df72 328 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 89 107 - T 22-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 Gene3D G3DSA:1.25.60.10 3 118 6.3E-28 T 22-04-2016 AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 Gene3D G3DSA:3.10.580.10 119 254 2.9E-26 T 22-04-2016 AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 TIGRFAM TIGR00400 mgtE: magnesium transporter 4 443 8.0E-149 T 22-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 SMART SM00924 24 127 1.8E-29 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 Pfam PF00571 CBS domain 192 245 9.9E-8 T 22-04-2016 IPR000644 CBS domain AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 Pfam PF00571 CBS domain 127 183 1.3E-6 T 22-04-2016 IPR000644 CBS domain AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 PANTHER PTHR11911 104 410 5.3E-48 T 22-04-2016 AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 SUPERFAMILY SSF161093 270 442 2.88E-48 T 22-04-2016 AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 PANTHER PTHR11911:SF23 104 410 5.3E-48 T 22-04-2016 AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 SMART SM00116 134 187 63.0 T 22-04-2016 IPR000644 CBS domain AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 SMART SM00116 198 246 5.6E-7 T 22-04-2016 IPR000644 CBS domain AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 SUPERFAMILY SSF54631 127 266 5.81E-31 T 22-04-2016 AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 SUPERFAMILY SSF158791 2 124 2.49E-28 T 22-04-2016 AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 Pfam PF03448 MgtE intracellular N domain 25 125 2.7E-26 T 22-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 Pfam PF01769 Divalent cation transporter 313 435 3.6E-27 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMK43_RS03480 126a467f42029e84b6de74715cb71632 447 Gene3D G3DSA:1.10.357.20 269 443 1.5E-55 T 22-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 AMK43_RS09030 19d947946a6d6acf321e5992977d98dd 152 PANTHER PTHR34986 2 152 4.5E-33 T 22-04-2016 AMK43_RS09030 19d947946a6d6acf321e5992977d98dd 152 SUPERFAMILY SSF51197 1 152 1.54E-35 T 22-04-2016 AMK43_RS09030 19d947946a6d6acf321e5992977d98dd 152 Pfam PF04074 Domain of unknown function (DUF386) 1 147 3.9E-38 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family AMK43_RS09030 19d947946a6d6acf321e5992977d98dd 152 Gene3D G3DSA:2.60.120.370 1 151 3.0E-44 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family AMK43_RS09030 19d947946a6d6acf321e5992977d98dd 152 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 1.7E-32 T 22-04-2016 IPR004375 YhcH/YjgK/YiaL family AMK43_RS02745 0e9fbf025059b34736a36e6b4bfb8218 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 274 7.3E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS02745 0e9fbf025059b34736a36e6b4bfb8218 281 PANTHER PTHR32243 5 281 2.1E-96 T 22-04-2016 AMK43_RS02745 0e9fbf025059b34736a36e6b4bfb8218 281 SUPERFAMILY SSF161098 16 280 2.24E-67 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS02745 0e9fbf025059b34736a36e6b4bfb8218 281 Gene3D G3DSA:1.10.3720.10 14 267 8.7E-62 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS02745 0e9fbf025059b34736a36e6b4bfb8218 281 PANTHER PTHR32243:SF31 5 281 2.1E-96 T 22-04-2016 IPR030165 sn-glycerol-3-phosphate transport system permease protein UgpE GO:0001407|GO:0005887|GO:0015794|GO:0055052 AMK43_RS02590 20c0de8e6e8b5225bbac23a3f6f4bf09 133 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site AMK43_RS02590 20c0de8e6e8b5225bbac23a3f6f4bf09 133 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 5.7E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site AMK43_RS02590 20c0de8e6e8b5225bbac23a3f6f4bf09 133 PRINTS PR00813 Bacterial general secretion pathway protein G signature 14 39 1.2E-6 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AMK43_RS02590 20c0de8e6e8b5225bbac23a3f6f4bf09 133 PRINTS PR00813 Bacterial general secretion pathway protein G signature 50 68 1.2E-6 T 22-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 AMK43_RS02590 20c0de8e6e8b5225bbac23a3f6f4bf09 133 SUPERFAMILY SSF54523 15 72 2.43E-11 T 22-04-2016 AMK43_RS02590 20c0de8e6e8b5225bbac23a3f6f4bf09 133 Gene3D G3DSA:3.30.700.10 15 70 2.1E-11 T 22-04-2016 AMK43_RS02590 20c0de8e6e8b5225bbac23a3f6f4bf09 133 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 10 34 9.4E-8 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site AMK43_RS09875 7b6d84a71b98e78348e2ac80c2b80b41 440 Gene3D G3DSA:3.10.580.10 200 342 1.1E-25 T 22-04-2016 AMK43_RS09875 7b6d84a71b98e78348e2ac80c2b80b41 440 SMART SM00116 223 272 0.062 T 22-04-2016 IPR000644 CBS domain AMK43_RS09875 7b6d84a71b98e78348e2ac80c2b80b41 440 SMART SM00116 286 334 0.012 T 22-04-2016 IPR000644 CBS domain AMK43_RS09875 7b6d84a71b98e78348e2ac80c2b80b41 440 PANTHER PTHR22777 6 433 1.8E-125 T 22-04-2016 AMK43_RS09875 7b6d84a71b98e78348e2ac80c2b80b41 440 Pfam PF00571 CBS domain 214 270 1.1E-6 T 22-04-2016 IPR000644 CBS domain AMK43_RS09875 7b6d84a71b98e78348e2ac80c2b80b41 440 Pfam PF00571 CBS domain 282 334 7.5E-8 T 22-04-2016 IPR000644 CBS domain AMK43_RS09875 7b6d84a71b98e78348e2ac80c2b80b41 440 SUPERFAMILY SSF56176 347 436 3.0E-19 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK43_RS09875 7b6d84a71b98e78348e2ac80c2b80b41 440 SUPERFAMILY SSF54631 209 351 1.64E-36 T 22-04-2016 AMK43_RS09875 7b6d84a71b98e78348e2ac80c2b80b41 440 Pfam PF01595 Domain of unknown function DUF21 11 199 4.4E-30 T 22-04-2016 IPR002550 Domain of unknown function DUF21 AMK43_RS09875 7b6d84a71b98e78348e2ac80c2b80b41 440 SMART SM01091 349 428 6.0E-22 T 22-04-2016 IPR005170 Transporter-associated domain AMK43_RS09875 7b6d84a71b98e78348e2ac80c2b80b41 440 Pfam PF03471 Transporter associated domain 350 426 3.8E-19 T 22-04-2016 IPR005170 Transporter-associated domain AMK43_RS09875 7b6d84a71b98e78348e2ac80c2b80b41 440 Gene3D G3DSA:3.30.465.10 343 428 2.6E-23 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK43_RS10890 dc5fe69282d0958ee517815b5170f1cd 175 Pfam PF04055 Radical SAM superfamily 33 121 3.7E-9 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS10890 dc5fe69282d0958ee517815b5170f1cd 175 SUPERFAMILY SSF102114 32 131 8.11E-11 T 22-04-2016 AMK43_RS10890 dc5fe69282d0958ee517815b5170f1cd 175 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 13 161 1.3E-53 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- AMK43_RS10890 dc5fe69282d0958ee517815b5170f1cd 175 PANTHER PTHR30352:SF2 1 160 8.3E-57 T 22-04-2016 AMK43_RS10890 dc5fe69282d0958ee517815b5170f1cd 175 PANTHER PTHR30352 1 160 8.3E-57 T 22-04-2016 AMK43_RS10890 dc5fe69282d0958ee517815b5170f1cd 175 PIRSF PIRSF000368 3 168 6.5E-57 T 22-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- AMK43_RS10890 dc5fe69282d0958ee517815b5170f1cd 175 Gene3D G3DSA:3.20.20.70 34 138 4.6E-11 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS10890 dc5fe69282d0958ee517815b5170f1cd 175 Pfam PF13353 4Fe-4S single cluster domain 22 159 1.4E-39 T 22-04-2016 AMK43_RS10700 e96dc0d79cf61848c31f40631668530a 405 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 164 1.7E-22 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK43_RS10700 e96dc0d79cf61848c31f40631668530a 405 Pfam PF01926 50S ribosome-binding GTPase 15 129 9.7E-19 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS10700 e96dc0d79cf61848c31f40631668530a 405 PANTHER PTHR11649 6 399 2.7E-36 T 22-04-2016 AMK43_RS10700 e96dc0d79cf61848c31f40631668530a 405 SUPERFAMILY SSF52540 14 145 3.96E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10700 e96dc0d79cf61848c31f40631668530a 405 PANTHER PTHR11649:SF59 6 399 2.7E-36 T 22-04-2016 AMK43_RS10700 e96dc0d79cf61848c31f40631668530a 405 TIGRFAM TIGR03918 GTP_HydF: [FeFe] hydrogenase H-cluster maturation GTPase HydF 6 399 2.2E-153 T 22-04-2016 IPR023873 [FeFe]-hydrogenase H-cluster maturation GTPase HydF AMK43_RS10700 e96dc0d79cf61848c31f40631668530a 405 Gene3D G3DSA:3.40.50.300 4 146 8.2E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02270 51fbe772e3957bc4c4467408c019edc1 515 SMART SM00327 164 356 6.2E-17 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK43_RS02270 51fbe772e3957bc4c4467408c019edc1 515 Pfam PF00092 von Willebrand factor type A domain 167 349 1.9E-14 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK43_RS02270 51fbe772e3957bc4c4467408c019edc1 515 SUPERFAMILY SSF53300 143 358 1.63E-24 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK43_RS02270 51fbe772e3957bc4c4467408c019edc1 515 Gene3D G3DSA:3.40.50.410 163 354 3.3E-14 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 SUPERFAMILY SSF53738 30 237 2.21E-44 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 182 3.5E-37 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 SUPERFAMILY SSF53738 219 312 2.83E-17 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 211 315 4.0E-25 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 Gene3D G3DSA:3.40.120.10 23 218 1.4E-57 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 PANTHER PTHR22573 22 571 8.5E-207 T 22-04-2016 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 PANTHER PTHR22573:SF54 22 571 8.5E-207 T 22-04-2016 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 141 150 - T 22-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 140 154 2.1E-8 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 2.1E-8 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 230 249 2.1E-8 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 SUPERFAMILY SSF55957 441 479 4.45E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 SUPERFAMILY SSF55957 511 571 4.45E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 Gene3D G3DSA:3.40.120.10 231 308 1.8E-21 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 503 551 1.5E-6 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 Gene3D G3DSA:3.40.120.10 309 452 3.9E-35 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 324 444 2.7E-22 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 Gene3D G3DSA:3.30.310.50 478 570 1.5E-21 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS01785 64d3b9e3d0dd8fba0c091f92065aa958 572 SUPERFAMILY SSF53738 304 452 5.69E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS04810 867379d6e35068b1c05e894477ff3e4e 351 Pfam PF00296 Luciferase-like monooxygenase 14 309 1.4E-37 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK43_RS04810 867379d6e35068b1c05e894477ff3e4e 351 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 3 342 6.5E-146 T 22-04-2016 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative AMK43_RS04810 867379d6e35068b1c05e894477ff3e4e 351 SUPERFAMILY SSF51679 23 343 2.75E-70 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK43_RS04810 867379d6e35068b1c05e894477ff3e4e 351 PANTHER PTHR30137 1 351 5.9E-131 T 22-04-2016 AMK43_RS04810 867379d6e35068b1c05e894477ff3e4e 351 PANTHER PTHR30137:SF8 1 351 5.9E-131 T 22-04-2016 AMK43_RS04810 867379d6e35068b1c05e894477ff3e4e 351 Gene3D G3DSA:3.20.20.30 2 348 4.9E-79 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK43_RS07525 89e1c5455b4fc22511d956eb81241071 369 PANTHER PTHR10629:SF32 2 367 5.1E-51 T 22-04-2016 AMK43_RS07525 89e1c5455b4fc22511d956eb81241071 369 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 363 1.5E-54 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07525 89e1c5455b4fc22511d956eb81241071 369 Gene3D G3DSA:3.90.120.10 182 198 4.4E-18 T 22-04-2016 AMK43_RS07525 89e1c5455b4fc22511d956eb81241071 369 Gene3D G3DSA:3.90.120.10 240 351 4.4E-18 T 22-04-2016 AMK43_RS07525 89e1c5455b4fc22511d956eb81241071 369 Gene3D G3DSA:3.40.50.150 4 181 2.7E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07525 89e1c5455b4fc22511d956eb81241071 369 PANTHER PTHR10629 2 367 5.1E-51 T 22-04-2016 AMK43_RS07525 89e1c5455b4fc22511d956eb81241071 369 SUPERFAMILY SSF53335 3 199 1.33E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07525 89e1c5455b4fc22511d956eb81241071 369 SUPERFAMILY SSF53335 230 366 1.33E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07525 89e1c5455b4fc22511d956eb81241071 369 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 8 361 9.9E-49 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMK43_RS07525 89e1c5455b4fc22511d956eb81241071 369 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 6 22 1.5E-14 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMK43_RS07525 89e1c5455b4fc22511d956eb81241071 369 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 172 185 1.5E-14 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMK43_RS07525 89e1c5455b4fc22511d956eb81241071 369 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 125 139 1.5E-14 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 SUPERFAMILY SSF52029 182 374 1.64E-83 T 22-04-2016 IPR027409 GroEL-like apical domain AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 PANTHER PTHR11353 1 540 2.2E-238 T 22-04-2016 AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 Gene3D G3DSA:1.10.560.10 5 194 3.8E-44 T 22-04-2016 IPR027413 GroEL-like equatorial domain AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 1.3E-252 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 22-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 Gene3D G3DSA:3.50.7.10 195 365 2.6E-92 T 22-04-2016 IPR027409 GroEL-like apical domain AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 Gene3D G3DSA:1.10.560.10 366 515 6.5E-42 T 22-04-2016 IPR027413 GroEL-like equatorial domain AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 SUPERFAMILY SSF48592 1 228 3.14E-64 T 22-04-2016 AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 PRINTS PR00298 60kDa chaperonin signature 266 289 2.9E-73 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 PRINTS PR00298 60kDa chaperonin signature 396 417 2.9E-73 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 PRINTS PR00298 60kDa chaperonin signature 82 109 2.9E-73 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 PRINTS PR00298 60kDa chaperonin signature 26 52 2.9E-73 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 PRINTS PR00298 60kDa chaperonin signature 348 373 2.9E-73 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 Hamap MF_00600 60 kDa chaperonin [groL]. 1 539 41.696 T 22-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 519 2.9E-102 T 22-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 AMK43_RS04140 cfb8747318069d743c3a2786427d2038 540 SUPERFAMILY SSF48592 370 520 2.75E-31 T 22-04-2016 AMK43_RS09910 346d51dce1b8a79a3f032a590d3e0b69 224 SUPERFAMILY SSF52172 1 179 9.52E-44 T 22-04-2016 IPR011006 CheY-like superfamily AMK43_RS09910 346d51dce1b8a79a3f032a590d3e0b69 224 Gene3D G3DSA:1.10.10.10 123 221 1.6E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09910 346d51dce1b8a79a3f032a590d3e0b69 224 Pfam PF00072 Response regulator receiver domain 3 113 4.4E-31 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS09910 346d51dce1b8a79a3f032a590d3e0b69 224 Gene3D G3DSA:3.40.50.2300 1 120 7.8E-45 T 22-04-2016 AMK43_RS09910 346d51dce1b8a79a3f032a590d3e0b69 224 SMART SM00862 145 220 3.5E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK43_RS09910 346d51dce1b8a79a3f032a590d3e0b69 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 219 3.3E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK43_RS09910 346d51dce1b8a79a3f032a590d3e0b69 224 PANTHER PTHR26402 1 223 2.0E-94 T 22-04-2016 AMK43_RS09910 346d51dce1b8a79a3f032a590d3e0b69 224 PANTHER PTHR26402:SF316 1 223 2.0E-94 T 22-04-2016 AMK43_RS09910 346d51dce1b8a79a3f032a590d3e0b69 224 SMART SM00448 1 112 6.4E-46 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 5 462 45.771 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 PANTHER PTHR22594:SF6 1 176 1.0E-235 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 PANTHER PTHR22594:SF6 195 461 1.0E-235 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 Gene3D G3DSA:3.30.930.10 106 460 2.6E-114 T 22-04-2016 AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 PANTHER PTHR22594 1 176 1.0E-235 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 PANTHER PTHR22594 195 461 1.0E-235 T 22-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 9 462 2.3E-193 T 22-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 Pfam PF00152 tRNA synthetases class II (D, K and N) 116 457 1.7E-87 T 22-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 Pfam PF01336 OB-fold nucleic acid binding domain 22 97 1.6E-11 T 22-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 Gene3D G3DSA:2.40.50.140 11 105 8.5E-20 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 417 431 1.8E-13 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 220 233 1.8E-13 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 204 216 1.8E-13 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 PRINTS PR01042 Aspartyl-tRNA synthetase signature 377 393 1.8E-13 T 22-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 SUPERFAMILY SSF50249 12 101 1.47E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS05015 4eaaf87dccf92f3f55f9e7a646b58ce1 462 SUPERFAMILY SSF55681 102 460 4.3E-99 T 22-04-2016 AMK43_RS02740 da762d8a4ec02cd4fb41d27e8e5f6c8e 298 PANTHER PTHR30193 10 298 3.2E-84 T 22-04-2016 AMK43_RS02740 da762d8a4ec02cd4fb41d27e8e5f6c8e 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 286 1.4E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS02740 da762d8a4ec02cd4fb41d27e8e5f6c8e 298 SUPERFAMILY SSF161098 61 287 7.85E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS02740 da762d8a4ec02cd4fb41d27e8e5f6c8e 298 Gene3D G3DSA:1.10.3720.10 67 296 7.0E-55 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS02740 da762d8a4ec02cd4fb41d27e8e5f6c8e 298 PANTHER PTHR30193:SF6 10 298 3.2E-84 T 22-04-2016 AMK43_RS08250 e2ff08c25bf0c5ea136af43a92f65a59 433 SUPERFAMILY SSF53850 34 425 1.09E-91 T 22-04-2016 AMK43_RS08250 e2ff08c25bf0c5ea136af43a92f65a59 433 Gene3D G3DSA:3.40.190.10 154 360 8.2E-55 T 22-04-2016 AMK43_RS08250 e2ff08c25bf0c5ea136af43a92f65a59 433 PANTHER PTHR30061:SF7 1 433 9.2E-105 T 22-04-2016 AMK43_RS08250 e2ff08c25bf0c5ea136af43a92f65a59 433 PANTHER PTHR30061 1 433 9.2E-105 T 22-04-2016 AMK43_RS08250 e2ff08c25bf0c5ea136af43a92f65a59 433 Pfam PF13416 Bacterial extracellular solute-binding protein 53 367 9.9E-55 T 22-04-2016 AMK43_RS01905 619baf8cb35219fe0af14275ef53632c 308 Pfam PF01148 Cytidylyltransferase family 4 304 2.2E-48 T 22-04-2016 AMK43_RS01905 619baf8cb35219fe0af14275ef53632c 308 PANTHER PTHR13773 1 308 1.3E-52 T 22-04-2016 AMK43_RS01905 619baf8cb35219fe0af14275ef53632c 308 PANTHER PTHR13773:SF0 1 308 1.3E-52 T 22-04-2016 AMK43_RS02910 533952cd272420d49374c07d2f823da0 221 Gene3D G3DSA:3.40.470.10 3 220 1.5E-97 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK43_RS02910 533952cd272420d49374c07d2f823da0 221 SMART SM00987 49 209 7.2E-35 T 22-04-2016 AMK43_RS02910 533952cd272420d49374c07d2f823da0 221 SUPERFAMILY SSF52141 2 220 7.2E-93 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK43_RS02910 533952cd272420d49374c07d2f823da0 221 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 22-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 AMK43_RS02910 533952cd272420d49374c07d2f823da0 221 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 213 5.0E-84 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 AMK43_RS02910 533952cd272420d49374c07d2f823da0 221 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 5 220 40.101 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 AMK43_RS02910 533952cd272420d49374c07d2f823da0 221 PANTHER PTHR11264 1 221 1.2E-127 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 AMK43_RS02910 533952cd272420d49374c07d2f823da0 221 SMART SM00986 49 209 7.2E-35 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK43_RS02910 533952cd272420d49374c07d2f823da0 221 Pfam PF03167 Uracil DNA glycosylase superfamily 54 210 1.0E-26 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK43_RS02545 a972c55399825a8f0dea40dfa1c0cee1 191 Pfam PF14124 Domain of unknown function (DUF4291) 14 189 4.0E-71 T 22-04-2016 IPR025633 Protein of unknown function DUF4291 AMK43_RS02545 a972c55399825a8f0dea40dfa1c0cee1 191 PANTHER PTHR38567 5 191 3.1E-69 T 22-04-2016 AMK43_RS11170 0999b9557ce7e17fa0e6ed23fbc06196 604 PANTHER PTHR12526 273 472 1.4E-17 T 22-04-2016 AMK43_RS11170 0999b9557ce7e17fa0e6ed23fbc06196 604 PANTHER PTHR12526 505 533 1.4E-17 T 22-04-2016 AMK43_RS11170 0999b9557ce7e17fa0e6ed23fbc06196 604 Pfam PF00534 Glycosyl transferases group 1 285 442 1.7E-13 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 AMK43_RS11170 0999b9557ce7e17fa0e6ed23fbc06196 604 SUPERFAMILY SSF53756 157 460 1.0E-29 T 22-04-2016 AMK43_RS11170 0999b9557ce7e17fa0e6ed23fbc06196 604 Gene3D G3DSA:3.40.50.2000 258 402 7.3E-12 T 22-04-2016 AMK43_RS09795 bc76fc67b17ad0903b7e309ce739852f 164 Pfam PF00258 Flavodoxin 6 156 4.8E-24 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMK43_RS09795 bc76fc67b17ad0903b7e309ce739852f 164 TIGRFAM TIGR01752 flav_long: flavodoxin 3 163 1.3E-62 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 AMK43_RS09795 bc76fc67b17ad0903b7e309ce739852f 164 PANTHER PTHR19384 137 156 3.5E-45 T 22-04-2016 AMK43_RS09795 bc76fc67b17ad0903b7e309ce739852f 164 PANTHER PTHR19384 1 117 3.5E-45 T 22-04-2016 AMK43_RS09795 bc76fc67b17ad0903b7e309ce739852f 164 Gene3D G3DSA:3.40.50.360 1 163 1.6E-53 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS09795 bc76fc67b17ad0903b7e309ce739852f 164 SUPERFAMILY SSF52218 1 164 4.19E-46 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS09795 bc76fc67b17ad0903b7e309ce739852f 164 PANTHER PTHR19384:SF73 137 156 3.5E-45 T 22-04-2016 AMK43_RS09795 bc76fc67b17ad0903b7e309ce739852f 164 PANTHER PTHR19384:SF73 1 117 3.5E-45 T 22-04-2016 AMK43_RS09795 bc76fc67b17ad0903b7e309ce739852f 164 PIRSF PIRSF038996 1 164 6.3E-62 T 22-04-2016 IPR010086 Flavodoxin, long chain GO:0010181 AMK43_RS09795 bc76fc67b17ad0903b7e309ce739852f 164 PRINTS PR00369 Flavodoxin signature 48 59 5.3E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMK43_RS09795 bc76fc67b17ad0903b7e309ce739852f 164 PRINTS PR00369 Flavodoxin signature 5 18 5.3E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMK43_RS09795 bc76fc67b17ad0903b7e309ce739852f 164 PRINTS PR00369 Flavodoxin signature 77 87 5.3E-5 T 22-04-2016 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 SUPERFAMILY SSF47323 655 928 1.68E-75 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 37 644 1.7E-212 T 22-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 PANTHER PTHR11946 282 922 0.0 T 22-04-2016 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 PANTHER PTHR11946 14 259 0.0 T 22-04-2016 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 Gene3D G3DSA:3.90.740.10 212 387 9.8E-57 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 399 414 5.0E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 564 573 5.0E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 531 544 5.0E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 5.0E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 57 68 5.0E-31 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 PANTHER PTHR11946:SF11 282 922 0.0 T 22-04-2016 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 PANTHER PTHR11946:SF11 14 259 0.0 T 22-04-2016 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 Gene3D G3DSA:1.10.730.10 644 828 2.4E-48 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 SUPERFAMILY SSF52374 401 651 2.13E-140 T 22-04-2016 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 SUPERFAMILY SSF52374 10 208 2.13E-140 T 22-04-2016 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 10 927 20.709 T 22-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 Pfam PF08264 Anticodon-binding domain of tRNA 688 844 1.2E-33 T 22-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 Gene3D G3DSA:3.40.50.620 401 642 1.2E-139 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 Gene3D G3DSA:3.40.50.620 25 211 1.2E-139 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 64 75 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 Pfam PF06827 Zinc finger found in FPG and IleRS 896 925 5.7E-11 T 22-04-2016 IPR010663 Zinc finger, FPG/IleRS-type AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 23 842 2.2E-291 T 22-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 AMK43_RS01205 5eacec146a14af1df42f12c00a1211a9 931 SUPERFAMILY SSF50677 209 401 4.06E-58 T 22-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 AMK43_RS06855 29ff3ea016875219c53695bcd95c4278 1027 Pfam PF04851 Type III restriction enzyme, res subunit 14 254 3.0E-18 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMK43_RS06855 29ff3ea016875219c53695bcd95c4278 1027 SUPERFAMILY SSF52540 14 28 1.3E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06855 29ff3ea016875219c53695bcd95c4278 1027 SUPERFAMILY SSF52540 87 291 1.3E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06855 29ff3ea016875219c53695bcd95c4278 1027 Gene3D G3DSA:3.40.50.300 86 149 3.3E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06855 29ff3ea016875219c53695bcd95c4278 1027 Gene3D G3DSA:3.40.50.300 327 349 3.3E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04705 c86081e960c83bcfd16e08f79774c4b4 179 PANTHER PTHR10204 3 178 4.8E-48 T 22-04-2016 AMK43_RS04705 c86081e960c83bcfd16e08f79774c4b4 179 PANTHER PTHR10204:SF44 3 178 4.8E-48 T 22-04-2016 AMK43_RS04705 c86081e960c83bcfd16e08f79774c4b4 179 Gene3D G3DSA:3.40.50.360 42 120 6.7E-10 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS04705 c86081e960c83bcfd16e08f79774c4b4 179 SUPERFAMILY SSF52218 49 121 2.39E-9 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS04065 dcd2c43bed16736392985967fddbb39e 303 Gene3D G3DSA:3.40.50.1980 206 298 5.1E-4 T 22-04-2016 AMK43_RS04065 dcd2c43bed16736392985967fddbb39e 303 Gene3D G3DSA:3.40.50.1980 9 174 3.9E-16 T 22-04-2016 AMK43_RS04065 dcd2c43bed16736392985967fddbb39e 303 Pfam PF01297 Zinc-uptake complex component A periplasmic 29 296 2.0E-18 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AMK43_RS04065 dcd2c43bed16736392985967fddbb39e 303 SUPERFAMILY SSF53807 27 297 4.91E-29 T 22-04-2016 AMK43_RS03960 bd494496691327a88693b77683cf5289 434 PANTHER PTHR11780:SF1 24 419 6.3E-94 T 22-04-2016 AMK43_RS03960 bd494496691327a88693b77683cf5289 434 Pfam PF13375 RnfC Barrel sandwich hybrid domain 10 102 2.3E-17 T 22-04-2016 IPR026902 RnfC Barrel sandwich hybrid domain AMK43_RS03960 bd494496691327a88693b77683cf5289 434 SUPERFAMILY SSF142019 85 289 1.83E-45 T 22-04-2016 AMK43_RS03960 bd494496691327a88693b77683cf5289 434 Gene3D G3DSA:1.10.1060.10 355 428 1.7E-14 T 22-04-2016 AMK43_RS03960 bd494496691327a88693b77683cf5289 434 PANTHER PTHR11780 24 419 6.3E-94 T 22-04-2016 AMK43_RS03960 bd494496691327a88693b77683cf5289 434 Pfam PF13237 4Fe-4S dicluster domain 353 410 4.5E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK43_RS03960 bd494496691327a88693b77683cf5289 434 Pfam PF10531 SLBB domain 281 330 5.8E-12 T 22-04-2016 IPR019554 Soluble ligand binding domain AMK43_RS03960 bd494496691327a88693b77683cf5289 434 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 399 410 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK43_RS03960 bd494496691327a88693b77683cf5289 434 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 360 371 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK43_RS03960 bd494496691327a88693b77683cf5289 434 SUPERFAMILY SSF142984 280 351 2.35E-11 T 22-04-2016 AMK43_RS03960 bd494496691327a88693b77683cf5289 434 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 127 265 7.9E-38 T 22-04-2016 IPR011538 NADH-ubiquinone oxidoreductase 51 kDa subunit, FMN-binding domain AMK43_RS03960 bd494496691327a88693b77683cf5289 434 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 10 428 2.9E-102 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AMK43_RS03960 bd494496691327a88693b77683cf5289 434 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 434 89.815 T 22-04-2016 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 AMK43_RS03960 bd494496691327a88693b77683cf5289 434 Gene3D G3DSA:2.40.50.100 44 83 9.6E-5 T 22-04-2016 AMK43_RS03960 bd494496691327a88693b77683cf5289 434 SUPERFAMILY SSF46548 348 424 1.57E-15 T 22-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 268 281 - T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 PANTHER PTHR11564:SF7 1 431 3.8E-249 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 PANTHER PTHR11564 1 431 3.8E-249 T 22-04-2016 AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 SMART SM00962 100 295 8.0E-102 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 SMART SM00382 99 300 6.8E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 Gene3D G3DSA:1.20.120.140 2 88 3.0E-35 T 22-04-2016 AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 426 1.6E-183 T 22-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 Pfam PF02978 Signal peptide binding domain 326 424 2.5E-33 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 33.494 T 22-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 SUPERFAMILY SSF47446 326 425 5.4E-34 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 Gene3D G3DSA:1.10.260.30 326 428 2.5E-35 T 22-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 Pfam PF00448 SRP54-type protein, GTPase domain 100 295 1.3E-69 T 22-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 SUPERFAMILY SSF52540 42 353 1.73E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 Gene3D G3DSA:3.40.50.300 96 296 8.9E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 7.2E-24 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK43_RS00630 4a56ea1257ad232d08d535733e7f1874 448 SMART SM00963 1 86 5.4E-36 T 22-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 AMK43_RS08450 a4564f674f85ccc60f6bd3a72be82393 838 Pfam PF02645 Uncharacterised protein, DegV family COG1307 551 835 9.6E-65 T 22-04-2016 IPR003797 DegV AMK43_RS08450 a4564f674f85ccc60f6bd3a72be82393 838 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 16 542 1.2E-139 T 22-04-2016 IPR019986 DAK2 domain-containing protein YloV AMK43_RS08450 a4564f674f85ccc60f6bd3a72be82393 838 Pfam PF13684 Dihydroxyacetone kinase family 239 542 6.3E-74 T 22-04-2016 IPR033470 Uncharacterised protein, DhaK domain AMK43_RS08450 a4564f674f85ccc60f6bd3a72be82393 838 PANTHER PTHR33434:SF4 1 542 6.9E-130 T 22-04-2016 AMK43_RS08450 a4564f674f85ccc60f6bd3a72be82393 838 SUPERFAMILY SSF101473 3 203 1.31E-40 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 AMK43_RS08450 a4564f674f85ccc60f6bd3a72be82393 838 Gene3D G3DSA:3.30.1180.10 706 836 7.3E-28 T 22-04-2016 AMK43_RS08450 a4564f674f85ccc60f6bd3a72be82393 838 SUPERFAMILY SSF82549 548 827 1.26E-62 T 22-04-2016 AMK43_RS08450 a4564f674f85ccc60f6bd3a72be82393 838 Gene3D G3DSA:3.40.50.10170 551 704 1.1E-39 T 22-04-2016 AMK43_RS08450 a4564f674f85ccc60f6bd3a72be82393 838 PANTHER PTHR33434 1 542 6.9E-130 T 22-04-2016 AMK43_RS08450 a4564f674f85ccc60f6bd3a72be82393 838 SMART SM01120 36 203 2.2E-56 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 AMK43_RS08450 a4564f674f85ccc60f6bd3a72be82393 838 SMART SM01121 239 542 8.4E-77 T 22-04-2016 IPR033470 Uncharacterised protein, DhaK domain AMK43_RS08450 a4564f674f85ccc60f6bd3a72be82393 838 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 551 832 4.7E-72 T 22-04-2016 IPR003797 DegV AMK43_RS08450 a4564f674f85ccc60f6bd3a72be82393 838 Pfam PF02734 DAK2 domain 36 202 2.0E-40 T 22-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 AMK43_RS02955 b96c994e1f406a6bfd3d3259c1d6cd10 184 SUPERFAMILY SSF56507 36 165 1.83E-11 T 22-04-2016 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0005622|GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00051 AMK43_RS02820 0633f3bfb37071bd86f2d302416f4cd3 291 PANTHER PTHR10819 6 289 3.3E-79 T 22-04-2016 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 AMK43_RS02820 0633f3bfb37071bd86f2d302416f4cd3 291 ProSitePatterns PS01322 Phosphotriesterase family signature 1. 6 14 - T 22-04-2016 IPR017947 Aryldialkylphosphatase, zinc-binding site GO:0008270|GO:0009056|GO:0016788 AMK43_RS02820 0633f3bfb37071bd86f2d302416f4cd3 291 SUPERFAMILY SSF51556 6 290 1.19E-86 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK43_RS02820 0633f3bfb37071bd86f2d302416f4cd3 291 Pfam PF02126 Phosphotriesterase family 6 290 5.5E-79 T 22-04-2016 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 AMK43_RS02820 0633f3bfb37071bd86f2d302416f4cd3 291 PIRSF PIRSF016839 2 291 1.4E-89 T 22-04-2016 AMK43_RS02820 0633f3bfb37071bd86f2d302416f4cd3 291 Gene3D G3DSA:3.20.20.140 6 291 4.7E-101 T 22-04-2016 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 SUPERFAMILY SSF53738 11 208 9.81E-25 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 PANTHER PTHR22573 1 507 3.2E-145 T 22-04-2016 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 Gene3D G3DSA:3.30.310.50 427 501 3.2E-13 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 PANTHER PTHR22573:SF18 1 507 3.2E-145 T 22-04-2016 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 Gene3D G3DSA:3.40.120.10 203 281 6.5E-23 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 Gene3D G3DSA:3.40.120.10 9 146 5.4E-29 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 290 401 9.1E-17 T 22-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 SUPERFAMILY SSF53738 290 392 4.24E-19 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 SUPERFAMILY SSF55957 423 500 2.88E-7 T 22-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 9 142 4.8E-26 T 22-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 SUPERFAMILY SSF53738 179 287 6.18E-25 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 201 220 1.0E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 249 1.0E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 111 125 1.0E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 265 280 1.0E-23 T 22-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 196 285 7.6E-22 T 22-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS02110 6ea75e260fc2bf3959e4a79e2a1ee695 510 Gene3D G3DSA:3.40.120.10 282 404 1.6E-31 T 22-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 AMK43_RS03265 7b6990c726d88c45bb9bbf96ee692bae 181 Gene3D G3DSA:3.40.50.300 2 40 7.4E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03265 7b6990c726d88c45bb9bbf96ee692bae 181 Hamap MF_00328 Guanylate kinase [gmk]. 1 181 32.689 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AMK43_RS03265 7b6990c726d88c45bb9bbf96ee692bae 181 SMART SM00072 2 181 2.2E-52 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMK43_RS03265 7b6990c726d88c45bb9bbf96ee692bae 181 Gene3D G3DSA:3.30.63.10 41 83 2.5E-28 T 22-04-2016 AMK43_RS03265 7b6990c726d88c45bb9bbf96ee692bae 181 Gene3D G3DSA:3.40.50.300 84 180 3.7E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03265 7b6990c726d88c45bb9bbf96ee692bae 181 PANTHER PTHR23117 1 180 4.4E-78 T 22-04-2016 AMK43_RS03265 7b6990c726d88c45bb9bbf96ee692bae 181 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 3 180 1.8E-69 T 22-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AMK43_RS03265 7b6990c726d88c45bb9bbf96ee692bae 181 ProSitePatterns PS00856 Guanylate kinase-like signature. 36 53 - T 22-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 AMK43_RS03265 7b6990c726d88c45bb9bbf96ee692bae 181 SUPERFAMILY SSF52540 2 180 1.1E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03265 7b6990c726d88c45bb9bbf96ee692bae 181 Pfam PF00625 Guanylate kinase 3 180 1.5E-45 T 22-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 SUPERFAMILY SSF74650 764 1058 3.14E-76 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 387 412 - T 22-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 Gene3D G3DSA:2.70.98.10 764 1058 5.5E-81 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 48 215 2.3E-41 T 22-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 Gene3D G3DSA:3.20.20.80 336 629 1.2E-103 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 PRINTS PR00132 Glycosyl hydrolase family 2 signature 143 158 3.5E-34 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 PRINTS PR00132 Glycosyl hydrolase family 2 signature 452 467 3.5E-34 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 PRINTS PR00132 Glycosyl hydrolase family 2 signature 377 395 3.5E-34 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 PRINTS PR00132 Glycosyl hydrolase family 2 signature 346 360 3.5E-34 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 PRINTS PR00132 Glycosyl hydrolase family 2 signature 537 552 3.5E-34 T 22-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 Pfam PF02929 Beta galactosidase small chain 784 1057 7.5E-68 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 SUPERFAMILY SSF49303 627 742 1.01E-17 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 PANTHER PTHR10066:SF72 600 1055 0.0 T 22-04-2016 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 PANTHER PTHR10066:SF72 11 582 0.0 T 22-04-2016 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 Gene3D G3DSA:2.60.40.320 205 335 3.9E-23 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 SUPERFAMILY SSF49785 8 215 9.21E-58 T 22-04-2016 IPR008979 Galactose-binding domain-like AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 SUPERFAMILY SSF51445 337 629 4.18E-96 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 Gene3D G3DSA:2.60.40.320 632 740 5.5E-19 T 22-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 Gene3D G3DSA:2.60.120.260 8 204 5.6E-70 T 22-04-2016 IPR008979 Galactose-binding domain-like AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 PANTHER PTHR10066 600 1055 0.0 T 22-04-2016 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 PANTHER PTHR10066 11 582 0.0 T 22-04-2016 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 SMART SM01038 777 1058 1.5E-92 T 22-04-2016 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 Pfam PF16353 Domain of unknown function(DUF4981) 646 740 8.4E-16 T 22-04-2016 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 SUPERFAMILY SSF49303 218 334 2.48E-15 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 452 466 - T 22-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 337 634 4.8E-110 T 22-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 AMK43_RS04230 cc77e91eae2efd97d208f2e0b2e3f890 1062 Pfam PF00703 Glycosyl hydrolases family 2 218 335 3.5E-11 T 22-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 AMK43_RS05495 782704501b63d2e19fd322250a6ca0fb 224 SUPERFAMILY SSF47979 60 131 3.01E-25 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 AMK43_RS05495 782704501b63d2e19fd322250a6ca0fb 224 SUPERFAMILY SSF46785 1 55 2.61E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS05495 782704501b63d2e19fd322250a6ca0fb 224 Gene3D G3DSA:1.10.60.10 70 128 7.7E-28 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 AMK43_RS05495 782704501b63d2e19fd322250a6ca0fb 224 SMART SM00529 22 120 1.6E-34 T 22-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 AMK43_RS05495 782704501b63d2e19fd322250a6ca0fb 224 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 60 128 9.5E-29 T 22-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 AMK43_RS05495 782704501b63d2e19fd322250a6ca0fb 224 PANTHER PTHR33238 1 217 3.9E-54 T 22-04-2016 AMK43_RS05495 782704501b63d2e19fd322250a6ca0fb 224 PANTHER PTHR33238:SF1 1 217 3.9E-54 T 22-04-2016 AMK43_RS05495 782704501b63d2e19fd322250a6ca0fb 224 Gene3D G3DSA:1.10.10.10 1 68 1.2E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS05495 782704501b63d2e19fd322250a6ca0fb 224 Pfam PF04023 FeoA domain 140 211 1.9E-5 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AMK43_RS05495 782704501b63d2e19fd322250a6ca0fb 224 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 2 54 2.1E-14 T 22-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 AMK43_RS04550 2d1e4266dba318f7576ea8191843a5d4 317 SUPERFAMILY SSF55174 16 67 1.73E-9 T 22-04-2016 AMK43_RS04550 2d1e4266dba318f7576ea8191843a5d4 317 SUPERFAMILY SSF55120 72 304 1.56E-75 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS04550 2d1e4266dba318f7576ea8191843a5d4 317 Pfam PF01479 S4 domain 17 61 9.8E-6 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS04550 2d1e4266dba318f7576ea8191843a5d4 317 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 299 2.9E-86 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS04550 2d1e4266dba318f7576ea8191843a5d4 317 Gene3D G3DSA:3.10.290.10 16 63 1.0E-12 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS04550 2d1e4266dba318f7576ea8191843a5d4 317 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS04550 2d1e4266dba318f7576ea8191843a5d4 317 PANTHER PTHR11079:SF73 1 311 7.3E-123 T 22-04-2016 AMK43_RS04550 2d1e4266dba318f7576ea8191843a5d4 317 PANTHER PTHR11079 1 311 7.3E-123 T 22-04-2016 AMK43_RS04550 2d1e4266dba318f7576ea8191843a5d4 317 SMART SM00363 16 79 3.2E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS04550 2d1e4266dba318f7576ea8191843a5d4 317 Pfam PF00849 RNA pseudouridylate synthase 89 245 1.2E-35 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 492 1.9E-156 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PRINTS PR00934 X-His dipeptidase (M25) signature 158 176 4.6E-54 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PRINTS PR00934 X-His dipeptidase (M25) signature 79 98 4.6E-54 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PRINTS PR00934 X-His dipeptidase (M25) signature 438 454 4.6E-54 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PRINTS PR00934 X-His dipeptidase (M25) signature 250 269 4.6E-54 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PRINTS PR00934 X-His dipeptidase (M25) signature 100 118 4.6E-54 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PRINTS PR00934 X-His dipeptidase (M25) signature 205 222 4.6E-54 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PRINTS PR00934 X-His dipeptidase (M25) signature 460 482 4.6E-54 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PRINTS PR00934 X-His dipeptidase (M25) signature 134 151 4.6E-54 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PIRSF PIRSF016599 1 495 3.8E-161 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PANTHER PTHR11014:SF54 1 184 2.2E-136 T 22-04-2016 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PANTHER PTHR11014:SF54 336 497 2.2E-136 T 22-04-2016 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PANTHER PTHR11014:SF54 203 280 2.2E-136 T 22-04-2016 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PANTHER PTHR11014 1 184 2.2E-136 T 22-04-2016 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PANTHER PTHR11014 336 497 2.2E-136 T 22-04-2016 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 PANTHER PTHR11014 203 280 2.2E-136 T 22-04-2016 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 Pfam PF01546 Peptidase family M20/M25/M40 71 490 4.0E-21 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 SUPERFAMILY SSF53187 407 492 7.43E-53 T 22-04-2016 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 SUPERFAMILY SSF53187 9 181 7.43E-53 T 22-04-2016 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 Pfam PF07687 Peptidase dimerisation domain 211 279 5.0E-6 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 Gene3D G3DSA:3.40.630.10 2 180 1.5E-92 T 22-04-2016 AMK43_RS04295 6785e12ef77137fd0eb8396e37f99b0e 497 Gene3D G3DSA:3.40.630.10 407 492 1.5E-92 T 22-04-2016 AMK43_RS05245 38c9a60e5069b3506efca795e8af9744 82 Pfam PF10387 Protein of unknown function (DUF2442) 5 78 1.3E-14 T 22-04-2016 IPR018841 Protein of unknown function DUF2442 AMK43_RS05245 38c9a60e5069b3506efca795e8af9744 82 Gene3D G3DSA:3.30.2020.10 3 79 4.7E-16 T 22-04-2016 IPR018841 Protein of unknown function DUF2442 AMK43_RS05245 38c9a60e5069b3506efca795e8af9744 82 SUPERFAMILY SSF143880 1 77 3.4E-14 T 22-04-2016 IPR018841 Protein of unknown function DUF2442 AMK43_RS00185 484511446e6dc356026d925c37e9bb31 261 Gene3D G3DSA:3.40.50.300 1 258 1.2E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00185 484511446e6dc356026d925c37e9bb31 261 PANTHER PTHR13696:SF52 1 258 4.1E-35 T 22-04-2016 AMK43_RS00185 484511446e6dc356026d925c37e9bb31 261 PANTHER PTHR13696 1 258 4.1E-35 T 22-04-2016 AMK43_RS00185 484511446e6dc356026d925c37e9bb31 261 Pfam PF13614 AAA domain 1 180 5.6E-31 T 22-04-2016 IPR025669 AAA domain AMK43_RS00185 484511446e6dc356026d925c37e9bb31 261 SUPERFAMILY SSF52540 1 256 2.1E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09840 302909895ce8277a1098fd03a3d946d0 256 Pfam PF03413 Peptidase propeptide and YPEB domain 36 97 6.3E-9 T 22-04-2016 IPR025711 PepSY domain AMK43_RS09840 302909895ce8277a1098fd03a3d946d0 256 Gene3D G3DSA:3.10.450.40 37 97 1.1E-6 T 22-04-2016 AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PANTHER PTHR11206 209 434 8.1E-50 T 22-04-2016 AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PANTHER PTHR11206 72 81 8.1E-50 T 22-04-2016 AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PANTHER PTHR11206 115 121 8.1E-50 T 22-04-2016 AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PANTHER PTHR11206 481 491 8.1E-50 T 22-04-2016 AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PANTHER PTHR11206:SF90 209 434 8.1E-50 T 22-04-2016 AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PANTHER PTHR11206:SF90 72 81 8.1E-50 T 22-04-2016 AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PANTHER PTHR11206:SF90 115 121 8.1E-50 T 22-04-2016 AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PANTHER PTHR11206:SF90 481 491 8.1E-50 T 22-04-2016 AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PIRSF PIRSF002869 1 499 7.8E-128 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 483 4.8E-108 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PRINTS PR01806 Virulence factor MviN signature 253 279 1.9E-39 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PRINTS PR01806 Virulence factor MviN signature 129 153 1.9E-39 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PRINTS PR01806 Virulence factor MviN signature 153 174 1.9E-39 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PRINTS PR01806 Virulence factor MviN signature 50 66 1.9E-39 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PRINTS PR01806 Virulence factor MviN signature 403 420 1.9E-39 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PRINTS PR01806 Virulence factor MviN signature 31 50 1.9E-39 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 PRINTS PR01806 Virulence factor MviN signature 351 370 1.9E-39 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK43_RS05780 d19fbabd327a542f6d4e6628b003e885 499 Pfam PF03023 MviN-like protein 26 457 4.7E-99 T 22-04-2016 IPR004268 Peptidoglycan biosynthesis protein MurJ AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 Gene3D G3DSA:2.30.42.10 272 363 3.3E-26 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 Gene3D G3DSA:2.40.10.10 161 271 1.5E-38 T 22-04-2016 AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 PRINTS PR00834 HtrA/DegQ protease family signature 201 218 2.0E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 2.0E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 PRINTS PR00834 HtrA/DegQ protease family signature 125 145 2.0E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 PRINTS PR00834 HtrA/DegQ protease family signature 104 116 2.0E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 PRINTS PR00834 HtrA/DegQ protease family signature 166 190 2.0E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 PRINTS PR00834 HtrA/DegQ protease family signature 309 321 2.0E-50 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 SUPERFAMILY SSF50156 227 352 1.71E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 PANTHER PTHR22939 3 362 3.8E-114 T 22-04-2016 AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 SMART SM00228 269 351 1.1E-9 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 Pfam PF13180 PDZ domain 269 360 1.4E-19 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 PANTHER PTHR22939:SF79 3 362 3.8E-114 T 22-04-2016 AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 Pfam PF13365 Trypsin-like peptidase domain 95 230 1.1E-31 T 22-04-2016 AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 SUPERFAMILY SSF50494 45 265 8.44E-62 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK43_RS07010 f5e3ab5f084d43cd9c8a34813c291d65 364 Gene3D G3DSA:2.40.10.10 36 160 1.4E-34 T 22-04-2016 AMK43_RS04435 a981463a17260f1616f6d8d953fd3d61 95 Pfam PF00216 Bacterial DNA-binding protein 1 89 9.1E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK43_RS04435 a981463a17260f1616f6d8d953fd3d61 95 Gene3D G3DSA:4.10.520.10 1 90 3.3E-33 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK43_RS04435 a981463a17260f1616f6d8d953fd3d61 95 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.6E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK43_RS04435 a981463a17260f1616f6d8d953fd3d61 95 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.6E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK43_RS04435 a981463a17260f1616f6d8d953fd3d61 95 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.6E-15 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK43_RS04435 a981463a17260f1616f6d8d953fd3d61 95 PANTHER PTHR33175 1 89 5.6E-34 T 22-04-2016 AMK43_RS04435 a981463a17260f1616f6d8d953fd3d61 95 SUPERFAMILY SSF47729 1 89 2.8E-28 T 22-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 AMK43_RS04435 a981463a17260f1616f6d8d953fd3d61 95 SMART SM00411 1 90 1.1E-30 T 22-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 AMK43_RS01890 b2da126b0740fab56a88dd0830589906 578 SMART SM00382 358 549 4.2E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS01890 b2da126b0740fab56a88dd0830589906 578 Gene3D G3DSA:1.20.1560.10 6 317 5.6E-48 T 22-04-2016 AMK43_RS01890 b2da126b0740fab56a88dd0830589906 578 Pfam PF00664 ABC transporter transmembrane region 22 290 1.9E-24 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS01890 b2da126b0740fab56a88dd0830589906 578 SUPERFAMILY SSF52540 325 566 4.89E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01890 b2da126b0740fab56a88dd0830589906 578 SUPERFAMILY SSF90123 5 318 2.35E-54 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS01890 b2da126b0740fab56a88dd0830589906 578 Pfam PF00005 ABC transporter 350 497 4.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS01890 b2da126b0740fab56a88dd0830589906 578 Gene3D G3DSA:3.40.50.300 334 560 4.2E-75 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01890 b2da126b0740fab56a88dd0830589906 578 PANTHER PTHR24222:SF24 1 578 1.5E-262 T 22-04-2016 AMK43_RS01890 b2da126b0740fab56a88dd0830589906 578 PANTHER PTHR24222 1 578 1.5E-262 T 22-04-2016 AMK43_RS01890 b2da126b0740fab56a88dd0830589906 578 ProSitePatterns PS00211 ABC transporters family signature. 469 483 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS05465 ae6ce4cbd967fc912147b26a2fa6977a 305 PANTHER PTHR31223 126 240 1.3E-35 T 22-04-2016 AMK43_RS05465 ae6ce4cbd967fc912147b26a2fa6977a 305 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 53 296 3.0E-73 T 22-04-2016 IPR010787 Protein of unknown function DUF1385 AMK43_RS05465 ae6ce4cbd967fc912147b26a2fa6977a 305 PANTHER PTHR31223:SF5 126 240 1.3E-35 T 22-04-2016 AMK43_RS05465 ae6ce4cbd967fc912147b26a2fa6977a 305 Pfam PF07136 Protein of unknown function (DUF1385) 52 293 2.2E-82 T 22-04-2016 IPR010787 Protein of unknown function DUF1385 AMK43_RS08630 39ee4be26766c40577bd7dd2df1b2280 146 PANTHER PTHR33221:SF5 2 140 8.2E-56 T 22-04-2016 AMK43_RS08630 39ee4be26766c40577bd7dd2df1b2280 146 Gene3D G3DSA:1.10.10.10 1 140 3.1E-49 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS08630 39ee4be26766c40577bd7dd2df1b2280 146 SUPERFAMILY SSF46785 2 139 8.65E-30 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS08630 39ee4be26766c40577bd7dd2df1b2280 146 PANTHER PTHR33221 2 140 8.2E-56 T 22-04-2016 AMK43_RS08630 39ee4be26766c40577bd7dd2df1b2280 146 Pfam PF02082 Transcriptional regulator 1 82 2.4E-20 T 22-04-2016 IPR000944 Transcription regulator Rrf2-type AMK43_RS04675 c9f3ac644936ee3db0330f42519dfd7d 427 PANTHER PTHR20992:SF9 1 316 5.9E-59 T 22-04-2016 AMK43_RS04675 c9f3ac644936ee3db0330f42519dfd7d 427 Pfam PF04087 Domain of unknown function (DUF389) 54 189 3.7E-36 T 22-04-2016 IPR005240 Protein of unknown function DUF389 AMK43_RS04675 c9f3ac644936ee3db0330f42519dfd7d 427 PANTHER PTHR20992 1 316 5.9E-59 T 22-04-2016 AMK43_RS04675 c9f3ac644936ee3db0330f42519dfd7d 427 TIGRFAM TIGR00341 TIGR00341: TIGR00341 family protein 22 225 3.5E-28 T 22-04-2016 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 PANTHER PTHR11557:SF0 4 32 1.5E-111 T 22-04-2016 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 PANTHER PTHR11557:SF0 51 315 1.5E-111 T 22-04-2016 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 232 5.5E-71 T 22-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 Gene3D G3DSA:3.30.160.40 241 313 6.8E-14 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 251 267 - T 22-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 49 312 2.2E-90 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 Gene3D G3DSA:3.40.190.10 131 219 5.3E-39 T 22-04-2016 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 Gene3D G3DSA:3.40.190.10 4 130 1.1E-36 T 22-04-2016 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 PANTHER PTHR11557 4 32 1.5E-111 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 PANTHER PTHR11557 51 315 1.5E-111 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 315 33.557 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 SUPERFAMILY SSF53850 5 239 9.12E-67 T 22-04-2016 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 PRINTS PR00151 Porphobilinogen deaminase signature 163 180 1.8E-26 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 1.8E-26 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 PRINTS PR00151 Porphobilinogen deaminase signature 250 267 1.8E-26 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 PRINTS PR00151 Porphobilinogen deaminase signature 96 115 1.8E-26 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 PIRSF PIRSF001438 1 315 4.8E-99 T 22-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 SUPERFAMILY SSF54782 240 314 2.22E-15 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS00755 ad8d71331aecb1ddb74027508f45697f 315 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 246 313 2.1E-12 T 22-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 AMK43_RS04780 54d0ad79c26d4b98117399bab1e9762b 222 SUPERFAMILY SSF161098 2 212 9.68E-50 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS04780 54d0ad79c26d4b98117399bab1e9762b 222 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 6 212 8.5E-65 T 22-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 AMK43_RS04780 54d0ad79c26d4b98117399bab1e9762b 222 Gene3D G3DSA:1.10.3720.10 2 211 9.2E-48 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS04780 54d0ad79c26d4b98117399bab1e9762b 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 21 213 9.0E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS04780 54d0ad79c26d4b98117399bab1e9762b 222 PANTHER PTHR30183 1 216 3.9E-71 T 22-04-2016 AMK43_RS06035 5e7d19cccbfd773d866ea6b4308caf6a 241 PIRSF PIRSF029033 1 241 2.0E-24 T 22-04-2016 IPR016907 Uncharacterised conserved protein UCP029033, periplasmic protein AMK43_RS06035 5e7d19cccbfd773d866ea6b4308caf6a 241 Pfam PF04402 Protein of unknown function (DUF541) 38 204 3.0E-20 T 22-04-2016 IPR007497 Protein of unknown function DUF541 AMK43_RS02420 d97ea5d17d86bd986204efd5a51b0615 171 Gene3D G3DSA:3.40.50.360 1 166 5.0E-25 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS02420 d97ea5d17d86bd986204efd5a51b0615 171 SUPERFAMILY SSF52218 1 137 1.82E-22 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS02420 d97ea5d17d86bd986204efd5a51b0615 171 Pfam PF12641 Flavodoxin domain 4 168 2.1E-53 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMK43_RS02420 d97ea5d17d86bd986204efd5a51b0615 171 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 22-04-2016 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 TIGRFAM TIGR03316 ygeW: knotted carbamoyltransferase YgeW 7 397 2.1E-239 T 22-04-2016 IPR017702 Putative carbamoyltransferase YgeW AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 SUPERFAMILY SSF53671 21 377 1.57E-56 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 344 367 1.5E-7 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 326 335 1.5E-7 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 70 89 1.5E-7 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 190 377 8.7E-44 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 PANTHER PTHR11405 22 126 2.2E-177 T 22-04-2016 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 PANTHER PTHR11405 218 278 2.2E-177 T 22-04-2016 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 PANTHER PTHR11405 144 195 2.2E-177 T 22-04-2016 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 PANTHER PTHR11405 294 392 2.2E-177 T 22-04-2016 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 Gene3D G3DSA:3.40.50.1370 179 365 3.0E-54 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 PANTHER PTHR11405:SF40 22 126 2.2E-177 T 22-04-2016 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 PANTHER PTHR11405:SF40 218 278 2.2E-177 T 22-04-2016 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 PANTHER PTHR11405:SF40 144 195 2.2E-177 T 22-04-2016 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 PANTHER PTHR11405:SF40 294 392 2.2E-177 T 22-04-2016 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 Gene3D G3DSA:3.40.50.1370 20 178 2.9E-35 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 28 179 4.7E-24 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 PRINTS PR00101 Aspartate carbamoyltransferase signature 98 107 9.1E-8 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 PRINTS PR00101 Aspartate carbamoyltransferase signature 60 82 9.1E-8 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS04725 4a1d6949b9b50d9569bbad160f6ff5de 401 PRINTS PR00101 Aspartate carbamoyltransferase signature 167 184 9.1E-8 T 22-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS00880 1e38bcb2b4a1a163318d522cfd9031d9 417 PANTHER PTHR30595 17 403 5.5E-15 T 22-04-2016 AMK43_RS00880 1e38bcb2b4a1a163318d522cfd9031d9 417 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 263 348 2.0E-17 T 22-04-2016 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain AMK43_RS00880 1e38bcb2b4a1a163318d522cfd9031d9 417 PANTHER PTHR30595:SF6 17 403 5.5E-15 T 22-04-2016 AMK43_RS00880 1e38bcb2b4a1a163318d522cfd9031d9 417 Pfam PF04326 Putative DNA-binding domain 2 108 1.6E-17 T 22-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 AMK43_RS00880 1e38bcb2b4a1a163318d522cfd9031d9 417 Gene3D G3DSA:1.10.10.10 344 403 4.5E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS07130 b6dfe5d7db71fe78b736fe88e7015c65 160 Gene3D G3DSA:3.40.430.10 1 160 6.4E-55 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain AMK43_RS07130 b6dfe5d7db71fe78b736fe88e7015c65 160 PRINTS PR00070 Dihydrofolate reductase signature 95 109 5.9E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK43_RS07130 b6dfe5d7db71fe78b736fe88e7015c65 160 PRINTS PR00070 Dihydrofolate reductase signature 40 51 5.9E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK43_RS07130 b6dfe5d7db71fe78b736fe88e7015c65 160 PRINTS PR00070 Dihydrofolate reductase signature 13 23 5.9E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK43_RS07130 b6dfe5d7db71fe78b736fe88e7015c65 160 PRINTS PR00070 Dihydrofolate reductase signature 27 35 5.9E-15 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK43_RS07130 b6dfe5d7db71fe78b736fe88e7015c65 160 PANTHER PTHR22778 1 160 5.3E-39 T 22-04-2016 AMK43_RS07130 b6dfe5d7db71fe78b736fe88e7015c65 160 Pfam PF00186 Dihydrofolate reductase 1 150 2.5E-52 T 22-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK43_RS07130 b6dfe5d7db71fe78b736fe88e7015c65 160 PANTHER PTHR22778:SF16 1 160 5.3E-39 T 22-04-2016 AMK43_RS07130 b6dfe5d7db71fe78b736fe88e7015c65 160 SUPERFAMILY SSF53597 2 160 5.63E-54 T 22-04-2016 IPR024072 Dihydrofolate reductase-like domain AMK43_RS07130 b6dfe5d7db71fe78b736fe88e7015c65 160 PIRSF PIRSF000194 1 160 1.1E-48 T 22-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 AMK43_RS04700 4ad885ab2af21cb4fb1fb17038104dba 199 SUPERFAMILY SSF46689 7 78 3.39E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS04700 4ad885ab2af21cb4fb1fb17038104dba 199 Gene3D G3DSA:1.10.357.10 64 192 3.3E-9 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK43_RS04700 4ad885ab2af21cb4fb1fb17038104dba 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 1.5E-8 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK43_RS04700 4ad885ab2af21cb4fb1fb17038104dba 199 PANTHER PTHR30328 6 191 9.6E-34 T 22-04-2016 AMK43_RS04700 4ad885ab2af21cb4fb1fb17038104dba 199 PANTHER PTHR30328:SF6 6 191 9.6E-34 T 22-04-2016 AMK43_RS04700 4ad885ab2af21cb4fb1fb17038104dba 199 Pfam PF13305 WHG domain 92 173 8.7E-9 T 22-04-2016 IPR025996 WHG domain AMK43_RS04700 4ad885ab2af21cb4fb1fb17038104dba 199 SUPERFAMILY SSF48498 84 191 1.16E-6 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK43_RS04700 4ad885ab2af21cb4fb1fb17038104dba 199 Gene3D G3DSA:1.10.10.60 12 63 5.1E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS02140 c84cc5f5d7fdb02441fe45a0871265b2 208 SMART SM00028 68 101 1.8 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS02140 c84cc5f5d7fdb02441fe45a0871265b2 208 SMART SM00028 34 67 0.015 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS02140 c84cc5f5d7fdb02441fe45a0871265b2 208 SMART SM00028 136 169 0.082 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS02140 c84cc5f5d7fdb02441fe45a0871265b2 208 SMART SM00028 102 135 0.017 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS02140 c84cc5f5d7fdb02441fe45a0871265b2 208 Gene3D G3DSA:1.25.40.10 13 115 9.5E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS02140 c84cc5f5d7fdb02441fe45a0871265b2 208 PANTHER PTHR23083 11 173 3.5E-27 T 22-04-2016 AMK43_RS02140 c84cc5f5d7fdb02441fe45a0871265b2 208 SUPERFAMILY SSF48452 15 168 2.28E-28 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS02140 c84cc5f5d7fdb02441fe45a0871265b2 208 Pfam PF07719 Tetratricopeptide repeat 103 132 3.5E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 AMK43_RS02140 c84cc5f5d7fdb02441fe45a0871265b2 208 Gene3D G3DSA:1.25.40.10 116 174 3.2E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS02140 c84cc5f5d7fdb02441fe45a0871265b2 208 Pfam PF13181 Tetratricopeptide repeat 35 67 4.3E-6 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS02140 c84cc5f5d7fdb02441fe45a0871265b2 208 Pfam PF13181 Tetratricopeptide repeat 70 98 0.002 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS08740 13c242b04cd4779b289c068d06b5b10d 216 Pfam PF05857 TraX protein 2 209 2.0E-46 T 22-04-2016 IPR008875 TraX AMK43_RS08590 b63c5da7c045c4d6f689b37dc79f6e31 120 PANTHER PTHR33204:SF8 6 115 6.0E-38 T 22-04-2016 AMK43_RS08590 b63c5da7c045c4d6f689b37dc79f6e31 120 SUPERFAMILY SSF46785 15 117 6.27E-31 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS08590 b63c5da7c045c4d6f689b37dc79f6e31 120 Gene3D G3DSA:1.10.10.10 9 118 6.5E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS08590 b63c5da7c045c4d6f689b37dc79f6e31 120 PANTHER PTHR33204 6 115 6.0E-38 T 22-04-2016 AMK43_RS08590 b63c5da7c045c4d6f689b37dc79f6e31 120 Pfam PF01638 HxlR-like helix-turn-helix 29 115 1.3E-29 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type AMK43_RS11300 eea0cca9286952d58a460e3184e0de75 416 Pfam PF04932 O-Antigen ligase 192 339 2.6E-12 T 22-04-2016 IPR007016 O-antigen ligase-related AMK43_RS05430 e97484359b76188cbc975cd80c1671b5 305 Pfam PF00698 Acyl transferase domain 6 287 2.3E-39 T 22-04-2016 IPR014043 Acyl transferase AMK43_RS05430 e97484359b76188cbc975cd80c1671b5 305 SUPERFAMILY SSF52151 4 123 1.99E-66 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMK43_RS05430 e97484359b76188cbc975cd80c1671b5 305 SUPERFAMILY SSF52151 187 301 1.99E-66 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMK43_RS05430 e97484359b76188cbc975cd80c1671b5 305 PANTHER PTHR10982 1 301 3.5E-114 T 22-04-2016 AMK43_RS05430 e97484359b76188cbc975cd80c1671b5 305 SUPERFAMILY SSF55048 129 194 6.8E-16 T 22-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 AMK43_RS05430 e97484359b76188cbc975cd80c1671b5 305 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 305 4.3E-33 T 22-04-2016 IPR020801 Polyketide synthase, acyl transferase domain AMK43_RS05430 e97484359b76188cbc975cd80c1671b5 305 Gene3D G3DSA:3.30.70.250 128 193 3.0E-26 T 22-04-2016 AMK43_RS05430 e97484359b76188cbc975cd80c1671b5 305 Gene3D G3DSA:3.40.366.10 2 123 1.6E-65 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AMK43_RS05430 e97484359b76188cbc975cd80c1671b5 305 Gene3D G3DSA:3.40.366.10 194 296 1.6E-65 T 22-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 AMK43_RS05430 e97484359b76188cbc975cd80c1671b5 305 PIRSF PIRSF000446 1 305 4.1E-95 T 22-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 AMK43_RS05430 e97484359b76188cbc975cd80c1671b5 305 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 288 2.8E-95 T 22-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 AMK43_RS03685 b2dfdcc65bac10be2cebacaf437fd750 157 PANTHER PTHR36444 1 157 3.6E-25 T 22-04-2016 AMK43_RS03685 b2dfdcc65bac10be2cebacaf437fd750 157 Pfam PF14526 Integron-associated effector binding protein 4 156 2.1E-31 T 22-04-2016 IPR029441 Integron-associated effector binding protein AMK43_RS03685 b2dfdcc65bac10be2cebacaf437fd750 157 Gene3D G3DSA:3.20.80.10 1 157 5.5E-43 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain AMK43_RS03685 b2dfdcc65bac10be2cebacaf437fd750 157 SMART SM00871 1 157 1.4E-30 T 22-04-2016 IPR010499 Bacterial transcription activator, effector binding AMK43_RS03685 b2dfdcc65bac10be2cebacaf437fd750 157 SUPERFAMILY SSF55136 1 156 3.14E-22 T 22-04-2016 IPR011256 Regulatory factor, effector binding domain AMK43_RS03685 b2dfdcc65bac10be2cebacaf437fd750 157 PANTHER PTHR36444:SF2 1 157 3.6E-25 T 22-04-2016 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 PRINTS PR01038 Arginyl-tRNA synthetase signature 132 148 5.6E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 PRINTS PR01038 Arginyl-tRNA synthetase signature 302 323 5.6E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 PRINTS PR01038 Arginyl-tRNA synthetase signature 117 132 5.6E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 PRINTS PR01038 Arginyl-tRNA synthetase signature 156 169 5.6E-21 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 8 91 1.3E-17 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 PANTHER PTHR11956 1 582 3.1E-183 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 7 582 1.8E-129 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 Gene3D G3DSA:3.40.50.620 111 451 2.5E-89 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 Pfam PF00750 tRNA synthetases class I (R) 110 444 6.6E-82 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 125 136 - T 22-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 PANTHER PTHR11956:SF1 1 582 3.1E-183 T 22-04-2016 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 Gene3D G3DSA:3.30.1360.70 7 107 1.2E-21 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 SUPERFAMILY SSF52374 110 452 8.94E-72 T 22-04-2016 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 SUPERFAMILY SSF55190 8 107 2.49E-16 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 SMART SM00836 458 582 1.2E-33 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 Gene3D G3DSA:1.10.730.10 452 582 3.9E-32 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 Pfam PF05746 DALR anticodon binding domain 458 582 5.8E-28 T 22-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 SUPERFAMILY SSF47323 452 582 4.51E-31 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 SMART SM01016 6 91 2.5E-18 T 22-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS05950 d6a37f6654ce5d694dd51881a7e7fde7 582 Hamap MF_00123 Arginine--tRNA ligase [argS]. 6 582 23.75 T 22-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 AMK43_RS07900 632fd82370c295e1a2e1f05e1e456864 358 PANTHER PTHR33529 1 354 2.3E-62 T 22-04-2016 AMK43_RS07900 632fd82370c295e1a2e1f05e1e456864 358 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 353 3.1E-63 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 AMK43_RS00275 8ed6f86ceaba075f0a2d9cef6e8eb70e 472 PANTHER PTHR23135:SF3 11 471 5.6E-114 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS00275 8ed6f86ceaba075f0a2d9cef6e8eb70e 472 SUPERFAMILY SSF53623 97 328 5.1E-42 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS00275 8ed6f86ceaba075f0a2d9cef6e8eb70e 472 Pfam PF02875 Mur ligase family, glutamate ligase domain 334 400 4.3E-13 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK43_RS00275 8ed6f86ceaba075f0a2d9cef6e8eb70e 472 Gene3D G3DSA:3.40.1190.10 88 328 3.5E-54 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS00275 8ed6f86ceaba075f0a2d9cef6e8eb70e 472 Gene3D G3DSA:3.90.190.20 332 471 1.7E-34 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK43_RS00275 8ed6f86ceaba075f0a2d9cef6e8eb70e 472 Gene3D G3DSA:3.40.1390.10 18 87 7.3E-9 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS00275 8ed6f86ceaba075f0a2d9cef6e8eb70e 472 SUPERFAMILY SSF53244 332 471 3.43E-29 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK43_RS00275 8ed6f86ceaba075f0a2d9cef6e8eb70e 472 PANTHER PTHR23135 11 471 5.6E-114 T 22-04-2016 AMK43_RS00275 8ed6f86ceaba075f0a2d9cef6e8eb70e 472 Pfam PF08245 Mur ligase middle domain 103 312 8.0E-41 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS00275 8ed6f86ceaba075f0a2d9cef6e8eb70e 472 SUPERFAMILY SSF63418 20 94 3.4E-10 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS00275 8ed6f86ceaba075f0a2d9cef6e8eb70e 472 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 27 471 2.0E-105 T 22-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS10940 b0e3f1d165aa89c13afe01b423cc8a11 178 SMART SM00530 6 61 8.1E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK43_RS10940 b0e3f1d165aa89c13afe01b423cc8a11 178 Gene3D G3DSA:1.10.260.40 3 69 1.0E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS10940 b0e3f1d165aa89c13afe01b423cc8a11 178 SUPERFAMILY SSF47413 2 66 1.1E-10 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS10940 b0e3f1d165aa89c13afe01b423cc8a11 178 Pfam PF01381 Helix-turn-helix 7 61 1.4E-7 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK43_RS01405 78be18af3fb44f4e8a6bbb883b4f8f70 418 Pfam PF00534 Glycosyl transferases group 1 196 357 1.4E-28 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 AMK43_RS01405 78be18af3fb44f4e8a6bbb883b4f8f70 418 SUPERFAMILY SSF53756 1 380 1.84E-73 T 22-04-2016 AMK43_RS01405 78be18af3fb44f4e8a6bbb883b4f8f70 418 PANTHER PTHR12526 1 417 2.3E-76 T 22-04-2016 AMK43_RS01405 78be18af3fb44f4e8a6bbb883b4f8f70 418 Pfam PF13439 Glycosyltransferase Family 4 14 184 4.5E-32 T 22-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain AMK43_RS01405 78be18af3fb44f4e8a6bbb883b4f8f70 418 Gene3D G3DSA:3.40.50.2000 176 357 1.4E-22 T 22-04-2016 AMK43_RS01405 78be18af3fb44f4e8a6bbb883b4f8f70 418 PANTHER PTHR12526:SF363 1 417 2.3E-76 T 22-04-2016 AMK43_RS07985 99d4ce49ef11dd7f48dfb2ba711d2db4 352 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 352 50.951 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 AMK43_RS07985 99d4ce49ef11dd7f48dfb2ba711d2db4 352 PANTHER PTHR11835 2 348 4.3E-199 T 22-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMK43_RS07985 99d4ce49ef11dd7f48dfb2ba711d2db4 352 SUPERFAMILY SSF53659 1 352 8.1E-126 T 22-04-2016 AMK43_RS07985 99d4ce49ef11dd7f48dfb2ba711d2db4 352 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 348 5.5E-137 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK43_RS07985 99d4ce49ef11dd7f48dfb2ba711d2db4 352 PANTHER PTHR11835:SF35 2 348 4.3E-199 T 22-04-2016 AMK43_RS07985 99d4ce49ef11dd7f48dfb2ba711d2db4 352 SMART SM01329 4 348 2.3E-204 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK43_RS07985 99d4ce49ef11dd7f48dfb2ba711d2db4 352 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 348 1.2E-160 T 22-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 AMK43_RS07985 99d4ce49ef11dd7f48dfb2ba711d2db4 352 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 239 258 - T 22-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 AMK43_RS07985 99d4ce49ef11dd7f48dfb2ba711d2db4 352 Gene3D G3DSA:3.40.718.10 1 350 1.1E-132 T 22-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 AMK43_RS08760 43e0584e0c24594278bc41c6c9109c25 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 22-04-2016 AMK43_RS08760 43e0584e0c24594278bc41c6c9109c25 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 259 8.7E-56 T 22-04-2016 IPR000150 Cof protein GO:0016787 AMK43_RS08760 43e0584e0c24594278bc41c6c9109c25 272 PANTHER PTHR10000:SF20 1 267 2.3E-71 T 22-04-2016 AMK43_RS08760 43e0584e0c24594278bc41c6c9109c25 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 261 9.1E-60 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS08760 43e0584e0c24594278bc41c6c9109c25 272 PANTHER PTHR10000 1 267 2.3E-71 T 22-04-2016 AMK43_RS08760 43e0584e0c24594278bc41c6c9109c25 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 227 3.7E-30 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 AMK43_RS08760 43e0584e0c24594278bc41c6c9109c25 272 SUPERFAMILY SSF56784 1 264 2.04E-61 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS08760 43e0584e0c24594278bc41c6c9109c25 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 AMK43_RS08760 43e0584e0c24594278bc41c6c9109c25 272 Gene3D G3DSA:3.30.1240.10 89 177 1.9E-12 T 22-04-2016 AMK43_RS08760 43e0584e0c24594278bc41c6c9109c25 272 Gene3D G3DSA:3.40.50.1000 178 267 1.4E-52 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS08760 43e0584e0c24594278bc41c6c9109c25 272 Gene3D G3DSA:3.40.50.1000 1 72 1.4E-52 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS10990 b56671477b8ed0a03ad24f4e3cd12ed4 190 SUPERFAMILY SSF46689 5 71 1.23E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS10990 b56671477b8ed0a03ad24f4e3cd12ed4 190 PANTHER PTHR30055 6 185 3.3E-21 T 22-04-2016 AMK43_RS10990 b56671477b8ed0a03ad24f4e3cd12ed4 190 PANTHER PTHR30055:SF70 6 185 3.3E-21 T 22-04-2016 AMK43_RS10990 b56671477b8ed0a03ad24f4e3cd12ed4 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 7.3E-14 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK43_RS10990 b56671477b8ed0a03ad24f4e3cd12ed4 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.2E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK43_RS10990 b56671477b8ed0a03ad24f4e3cd12ed4 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.2E-6 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK43_RS10990 b56671477b8ed0a03ad24f4e3cd12ed4 190 Gene3D G3DSA:1.10.357.10 8 187 1.4E-29 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK43_RS04715 50644e12ebc8d9a0de9cfbc1f7a41249 404 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 39 383 2.5E-45 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK43_RS04715 50644e12ebc8d9a0de9cfbc1f7a41249 404 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 23 398 3.0E-178 T 22-04-2016 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 AMK43_RS04715 50644e12ebc8d9a0de9cfbc1f7a41249 404 SUPERFAMILY SSF53686 35 358 3.8E-56 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK43_RS04715 50644e12ebc8d9a0de9cfbc1f7a41249 404 PANTHER PTHR10314:SF127 25 89 1.0E-139 T 22-04-2016 AMK43_RS04715 50644e12ebc8d9a0de9cfbc1f7a41249 404 PANTHER PTHR10314:SF127 111 401 1.0E-139 T 22-04-2016 AMK43_RS04715 50644e12ebc8d9a0de9cfbc1f7a41249 404 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 3 399 8.0E-196 T 22-04-2016 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 AMK43_RS04715 50644e12ebc8d9a0de9cfbc1f7a41249 404 Gene3D G3DSA:3.40.50.1100 117 397 4.8E-28 T 22-04-2016 AMK43_RS04715 50644e12ebc8d9a0de9cfbc1f7a41249 404 PANTHER PTHR10314 25 89 1.0E-139 T 22-04-2016 AMK43_RS04715 50644e12ebc8d9a0de9cfbc1f7a41249 404 PANTHER PTHR10314 111 401 1.0E-139 T 22-04-2016 AMK43_RS04835 29b1f9fa24fde91119b77b47272f0370 325 SMART SM00116 277 325 2.6 T 22-04-2016 IPR000644 CBS domain AMK43_RS04835 29b1f9fa24fde91119b77b47272f0370 325 SMART SM00116 209 260 4.1 T 22-04-2016 IPR000644 CBS domain AMK43_RS04835 29b1f9fa24fde91119b77b47272f0370 325 Pfam PF00571 CBS domain 270 323 6.0E-10 T 22-04-2016 IPR000644 CBS domain AMK43_RS04835 29b1f9fa24fde91119b77b47272f0370 325 Pfam PF00571 CBS domain 200 260 1.4E-4 T 22-04-2016 IPR000644 CBS domain AMK43_RS04835 29b1f9fa24fde91119b77b47272f0370 325 Pfam PF01380 SIS domain 42 171 7.6E-27 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK43_RS04835 29b1f9fa24fde91119b77b47272f0370 325 PANTHER PTHR38418:SF1 29 196 1.4E-36 T 22-04-2016 AMK43_RS04835 29b1f9fa24fde91119b77b47272f0370 325 SUPERFAMILY SSF53697 7 290 5.56E-62 T 22-04-2016 AMK43_RS04835 29b1f9fa24fde91119b77b47272f0370 325 PANTHER PTHR38418 29 196 1.4E-36 T 22-04-2016 AMK43_RS04835 29b1f9fa24fde91119b77b47272f0370 325 Gene3D G3DSA:3.40.50.10490 8 194 7.1E-51 T 22-04-2016 AMK43_RS04835 29b1f9fa24fde91119b77b47272f0370 325 Gene3D G3DSA:3.10.580.10 195 322 2.3E-33 T 22-04-2016 AMK43_RS04835 29b1f9fa24fde91119b77b47272f0370 325 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 45 316 1.1E-94 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AMK43_RS04835 29b1f9fa24fde91119b77b47272f0370 325 PIRSF PIRSF004692 1 325 1.9E-121 T 22-04-2016 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 AMK43_RS01945 c87d6e2b8a0177675546faeab40a2858 567 Pfam PF00664 ABC transporter transmembrane region 36 283 1.5E-8 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS01945 c87d6e2b8a0177675546faeab40a2858 567 Pfam PF00005 ABC transporter 353 503 3.2E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS01945 c87d6e2b8a0177675546faeab40a2858 567 SUPERFAMILY SSF52540 329 566 4.42E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01945 c87d6e2b8a0177675546faeab40a2858 567 Gene3D G3DSA:3.40.50.300 334 560 1.7E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01945 c87d6e2b8a0177675546faeab40a2858 567 PANTHER PTHR24221:SF138 27 558 6.7E-83 T 22-04-2016 AMK43_RS01945 c87d6e2b8a0177675546faeab40a2858 567 Gene3D G3DSA:1.20.1560.10 27 316 1.2E-21 T 22-04-2016 AMK43_RS01945 c87d6e2b8a0177675546faeab40a2858 567 SUPERFAMILY SSF90123 27 305 5.23E-28 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS01945 c87d6e2b8a0177675546faeab40a2858 567 PANTHER PTHR24221 27 558 6.7E-83 T 22-04-2016 AMK43_RS01945 c87d6e2b8a0177675546faeab40a2858 567 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS01945 c87d6e2b8a0177675546faeab40a2858 567 SMART SM00382 362 548 1.4E-16 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS08735 36cc67c3bb2cccfa9784dd1234aa187c 233 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 170 2.8E-22 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK43_RS08735 36cc67c3bb2cccfa9784dd1234aa187c 233 Hamap MF_00942 Endonuclease III [nth]. 1 211 36.379 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMK43_RS08735 36cc67c3bb2cccfa9784dd1234aa187c 233 Gene3D G3DSA:1.10.340.30 23 123 7.2E-35 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK43_RS08735 36cc67c3bb2cccfa9784dd1234aa187c 233 Pfam PF00633 Helix-hairpin-helix motif 101 127 2.3E-7 T 22-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 AMK43_RS08735 36cc67c3bb2cccfa9784dd1234aa187c 233 SUPERFAMILY SSF48150 2 211 3.93E-65 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK43_RS08735 36cc67c3bb2cccfa9784dd1234aa187c 233 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 189 205 1.4E-5 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 AMK43_RS08735 36cc67c3bb2cccfa9784dd1234aa187c 233 SMART SM00478 39 187 6.8E-50 T 22-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 AMK43_RS08735 36cc67c3bb2cccfa9784dd1234aa187c 233 TIGRFAM TIGR01083 nth: endonuclease III 5 196 8.1E-73 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMK43_RS08735 36cc67c3bb2cccfa9784dd1234aa187c 233 SMART SM00525 188 208 8.0E-4 T 22-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 AMK43_RS08735 36cc67c3bb2cccfa9784dd1234aa187c 233 PIRSF PIRSF001435 1 214 4.7E-50 T 22-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 AMK43_RS08735 36cc67c3bb2cccfa9784dd1234aa187c 233 Gene3D G3DSA:1.10.1670.10 124 210 2.5E-31 T 22-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal AMK43_RS08735 36cc67c3bb2cccfa9784dd1234aa187c 233 PANTHER PTHR10359 21 214 7.5E-72 T 22-04-2016 AMK43_RS10780 24d6e791cb7cd8bf1fc312968ce2d113 93 Gene3D G3DSA:3.40.50.270 1 89 2.0E-21 T 22-04-2016 AMK43_RS10780 24d6e791cb7cd8bf1fc312968ce2d113 93 PANTHER PTHR33843:SF2 1 90 3.6E-16 T 22-04-2016 AMK43_RS10780 24d6e791cb7cd8bf1fc312968ce2d113 93 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 89 4.2E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS10780 24d6e791cb7cd8bf1fc312968ce2d113 93 PANTHER PTHR33843 1 90 3.6E-16 T 22-04-2016 AMK43_RS10780 24d6e791cb7cd8bf1fc312968ce2d113 93 SUPERFAMILY SSF52794 1 89 3.92E-21 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS03040 c53d1408416a97ce37b4c3046cceb753 180 Pfam PF02417 Chromate transporter 5 169 2.9E-47 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 AMK43_RS03040 c53d1408416a97ce37b4c3046cceb753 180 PANTHER PTHR33567 4 180 2.4E-70 T 22-04-2016 AMK43_RS03040 c53d1408416a97ce37b4c3046cceb753 180 PANTHER PTHR33567:SF2 4 180 2.4E-70 T 22-04-2016 AMK43_RS00485 28c385221edd27e786a57b96c13d1b17 170 Gene3D G3DSA:3.30.230.10 80 163 7.6E-32 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS00485 28c385221edd27e786a57b96c13d1b17 170 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 13 167 5.4E-60 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK43_RS00485 28c385221edd27e786a57b96c13d1b17 170 Pfam PF03719 Ribosomal protein S5, C-terminal domain 91 161 8.1E-30 T 22-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK43_RS00485 28c385221edd27e786a57b96c13d1b17 170 Gene3D G3DSA:3.30.160.20 13 76 9.1E-27 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain AMK43_RS00485 28c385221edd27e786a57b96c13d1b17 170 SUPERFAMILY SSF54211 83 163 3.79E-25 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS00485 28c385221edd27e786a57b96c13d1b17 170 ProSitePatterns PS00585 Ribosomal protein S5 signature. 32 64 - T 22-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site AMK43_RS00485 28c385221edd27e786a57b96c13d1b17 170 Pfam PF00333 Ribosomal protein S5, N-terminal domain 16 78 1.2E-26 T 22-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK43_RS00485 28c385221edd27e786a57b96c13d1b17 170 PANTHER PTHR13718 14 168 2.5E-67 T 22-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00485 28c385221edd27e786a57b96c13d1b17 170 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 167 32.88 T 22-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK43_RS00485 28c385221edd27e786a57b96c13d1b17 170 SUPERFAMILY SSF54768 13 80 3.98E-21 T 22-04-2016 AMK43_RS10605 944fe5bcf3197b9903c5531c7d0bdbca 566 ProSitePatterns PS00211 ABC transporters family signature. 459 473 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS10605 944fe5bcf3197b9903c5531c7d0bdbca 566 Pfam PF00005 ABC transporter 342 485 9.0E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS10605 944fe5bcf3197b9903c5531c7d0bdbca 566 Gene3D G3DSA:3.40.50.300 326 561 1.4E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10605 944fe5bcf3197b9903c5531c7d0bdbca 566 Gene3D G3DSA:1.20.1560.10 8 303 3.7E-42 T 22-04-2016 AMK43_RS10605 944fe5bcf3197b9903c5531c7d0bdbca 566 PANTHER PTHR24221:SF138 8 557 3.4E-102 T 22-04-2016 AMK43_RS10605 944fe5bcf3197b9903c5531c7d0bdbca 566 PANTHER PTHR24221 8 557 3.4E-102 T 22-04-2016 AMK43_RS10605 944fe5bcf3197b9903c5531c7d0bdbca 566 SUPERFAMILY SSF52540 316 556 3.97E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10605 944fe5bcf3197b9903c5531c7d0bdbca 566 SMART SM00382 350 534 2.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS10605 944fe5bcf3197b9903c5531c7d0bdbca 566 SUPERFAMILY SSF90123 5 292 3.14E-50 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS10605 944fe5bcf3197b9903c5531c7d0bdbca 566 Pfam PF00664 ABC transporter transmembrane region 13 281 6.3E-27 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 Hamap MF_00195 GTPase Der [der]. 2 436 40.13 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 432 3.5E-33 T 22-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 6.3E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 6.3E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 PANTHER PTHR11649:SF5 1 432 1.8E-143 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 SUPERFAMILY SSF52540 5 165 1.99E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 Pfam PF01926 50S ribosome-binding GTPase 177 295 2.3E-26 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 Pfam PF01926 50S ribosome-binding GTPase 5 120 5.3E-29 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 SUPERFAMILY SSF52540 139 436 6.58E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 PIRSF PIRSF006485 1 439 4.9E-176 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 8.1E-176 T 22-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 Gene3D G3DSA:3.40.50.300 172 358 2.2E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 Gene3D G3DSA:3.40.50.300 5 171 2.8E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 PANTHER PTHR11649 1 432 1.8E-143 T 22-04-2016 AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 176 339 1.1E-28 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 159 1.5E-27 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK43_RS10115 4e525e933b5168a36745c03bbb50fc14 439 Gene3D G3DSA:3.30.300.20 359 435 3.5E-34 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta AMK43_RS01345 097c2d5eafb61d2f5adb5b44a8e1be97 349 Gene3D G3DSA:3.40.50.300 21 179 2.2E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01345 097c2d5eafb61d2f5adb5b44a8e1be97 349 SUPERFAMILY SSF46785 258 329 2.11E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS01345 097c2d5eafb61d2f5adb5b44a8e1be97 349 Gene3D G3DSA:1.10.8.60 185 256 1.6E-28 T 22-04-2016 AMK43_RS01345 097c2d5eafb61d2f5adb5b44a8e1be97 349 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 11 236 5.2E-114 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AMK43_RS01345 097c2d5eafb61d2f5adb5b44a8e1be97 349 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 325 7.0E-28 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMK43_RS01345 097c2d5eafb61d2f5adb5b44a8e1be97 349 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 349 156.807 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMK43_RS01345 097c2d5eafb61d2f5adb5b44a8e1be97 349 SMART SM00382 52 185 7.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS01345 097c2d5eafb61d2f5adb5b44a8e1be97 349 Gene3D G3DSA:1.10.10.10 258 329 1.4E-32 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS01345 097c2d5eafb61d2f5adb5b44a8e1be97 349 PANTHER PTHR13779 1 329 1.7E-165 T 22-04-2016 AMK43_RS01345 097c2d5eafb61d2f5adb5b44a8e1be97 349 SUPERFAMILY SSF52540 21 251 1.5E-57 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01345 097c2d5eafb61d2f5adb5b44a8e1be97 349 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 1.9E-32 T 22-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 AMK43_RS01345 097c2d5eafb61d2f5adb5b44a8e1be97 349 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 327 8.2E-140 T 22-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMK43_RS01345 097c2d5eafb61d2f5adb5b44a8e1be97 349 PANTHER PTHR13779:SF25 1 329 1.7E-165 T 22-04-2016 AMK43_RS01130 38e361a99f68092a6d393a783baa52c7 248 Pfam PF00005 ABC transporter 19 170 6.6E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS01130 38e361a99f68092a6d393a783baa52c7 248 PANTHER PTHR24220:SF85 5 247 7.5E-112 T 22-04-2016 AMK43_RS01130 38e361a99f68092a6d393a783baa52c7 248 SUPERFAMILY SSF52540 3 229 1.6E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01130 38e361a99f68092a6d393a783baa52c7 248 PANTHER PTHR24220 5 247 7.5E-112 T 22-04-2016 AMK43_RS01130 38e361a99f68092a6d393a783baa52c7 248 Gene3D G3DSA:3.40.50.300 3 229 3.8E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01130 38e361a99f68092a6d393a783baa52c7 248 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS01130 38e361a99f68092a6d393a783baa52c7 248 SMART SM00382 28 212 1.1E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS01130 38e361a99f68092a6d393a783baa52c7 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 241 1.6E-104 T 22-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 AMK43_RS03450 c91a78ebf49b5a08b167c4435da79137 535 SUPERFAMILY SSF51905 473 530 2.98E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS03450 c91a78ebf49b5a08b167c4435da79137 535 SUPERFAMILY SSF51905 91 299 2.98E-29 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS03450 c91a78ebf49b5a08b167c4435da79137 535 PANTHER PTHR10617 65 386 4.7E-133 T 22-04-2016 AMK43_RS03450 c91a78ebf49b5a08b167c4435da79137 535 PANTHER PTHR10617 472 531 4.7E-133 T 22-04-2016 AMK43_RS03450 c91a78ebf49b5a08b167c4435da79137 535 PIRSF PIRSF038984 1 535 4.0E-206 T 22-04-2016 IPR028348 FAD dependent protein AMK43_RS03450 c91a78ebf49b5a08b167c4435da79137 535 Gene3D G3DSA:3.50.50.60 478 530 2.1E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS03450 c91a78ebf49b5a08b167c4435da79137 535 Gene3D G3DSA:3.50.50.60 91 297 2.1E-30 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS03450 c91a78ebf49b5a08b167c4435da79137 535 PANTHER PTHR10617:SF52 65 386 4.7E-133 T 22-04-2016 AMK43_RS03450 c91a78ebf49b5a08b167c4435da79137 535 PANTHER PTHR10617:SF52 472 531 4.7E-133 T 22-04-2016 AMK43_RS03450 c91a78ebf49b5a08b167c4435da79137 535 Pfam PF00890 FAD binding domain 95 125 1.8E-4 T 22-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain AMK43_RS02280 f0cde4fc0458409cf0b9681fdcb8b088 234 PANTHER PTHR30134 1 203 1.4E-123 T 22-04-2016 AMK43_RS02280 f0cde4fc0458409cf0b9681fdcb8b088 234 SUPERFAMILY SSF52540 1 146 5.35E-18 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02280 f0cde4fc0458409cf0b9681fdcb8b088 234 PIRSF PIRSF005624 1 198 3.0E-47 T 22-04-2016 AMK43_RS02280 f0cde4fc0458409cf0b9681fdcb8b088 234 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 161 7.3E-11 T 22-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain AMK43_RS02280 f0cde4fc0458409cf0b9681fdcb8b088 234 Gene3D G3DSA:3.40.50.300 3 65 4.3E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02280 f0cde4fc0458409cf0b9681fdcb8b088 234 PANTHER PTHR30134:SF1 1 203 1.4E-123 T 22-04-2016 AMK43_RS04325 d74d15663c8539d8415b261a57a716da 338 SUPERFAMILY SSF52540 1 240 2.47E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04325 d74d15663c8539d8415b261a57a716da 338 Gene3D G3DSA:3.40.50.300 2 236 6.8E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04325 d74d15663c8539d8415b261a57a716da 338 SUPERFAMILY SSF55021 249 335 1.45E-17 T 22-04-2016 AMK43_RS04325 d74d15663c8539d8415b261a57a716da 338 SMART SM00382 30 218 9.1E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS04325 d74d15663c8539d8415b261a57a716da 338 PANTHER PTHR24220 3 253 2.9E-135 T 22-04-2016 AMK43_RS04325 d74d15663c8539d8415b261a57a716da 338 Pfam PF09383 NIL domain 263 333 3.6E-16 T 22-04-2016 IPR018449 NIL domain AMK43_RS04325 d74d15663c8539d8415b261a57a716da 338 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS04325 d74d15663c8539d8415b261a57a716da 338 Pfam PF00005 ABC transporter 21 169 3.1E-37 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS04325 d74d15663c8539d8415b261a57a716da 338 SMART SM00930 260 335 6.0E-17 T 22-04-2016 IPR018449 NIL domain AMK43_RS04325 d74d15663c8539d8415b261a57a716da 338 PANTHER PTHR24220:SF549 3 253 2.9E-135 T 22-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 AMK43_RS04325 d74d15663c8539d8415b261a57a716da 338 Gene3D G3DSA:3.30.70.260 237 335 2.6E-23 T 22-04-2016 AMK43_RS08310 2b9a75ed75cd05a3bdf69e54d584c5ba 242 Pfam PF01881 CRISPR associated protein Cas6 98 240 4.8E-25 T 22-04-2016 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 AMK43_RS08310 2b9a75ed75cd05a3bdf69e54d584c5ba 242 TIGRFAM TIGR01877 cas_cas6: CRISPR-associated endoribonuclease Cas6 43 240 6.9E-19 T 22-04-2016 IPR010156 CRISPR-associated protein, Cas6 GO:0016788 AMK43_RS06105 58962d8ea02b8b9f3301e6a6a0d677e7 257 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS06105 58962d8ea02b8b9f3301e6a6a0d677e7 257 Pfam PF00005 ABC transporter 25 162 3.4E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS06105 58962d8ea02b8b9f3301e6a6a0d677e7 257 Gene3D G3DSA:3.40.50.300 6 210 1.6E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06105 58962d8ea02b8b9f3301e6a6a0d677e7 257 SMART SM00382 34 213 6.0E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS06105 58962d8ea02b8b9f3301e6a6a0d677e7 257 PANTHER PTHR24220:SF589 7 241 2.8E-86 T 22-04-2016 AMK43_RS06105 58962d8ea02b8b9f3301e6a6a0d677e7 257 PANTHER PTHR24220 7 241 2.8E-86 T 22-04-2016 AMK43_RS06105 58962d8ea02b8b9f3301e6a6a0d677e7 257 SUPERFAMILY SSF52540 5 242 4.09E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06440 a1e89c8bf09aea5238114dfa30eae8c2 341 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 323 4.5E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK43_RS06440 a1e89c8bf09aea5238114dfa30eae8c2 341 PANTHER PTHR32196 5 340 1.4E-78 T 22-04-2016 AMK43_RS06440 a1e89c8bf09aea5238114dfa30eae8c2 341 PANTHER PTHR32196:SF30 5 340 1.4E-78 T 22-04-2016 AMK43_RS01860 7302c4ba799a38d8b5fb87f80c749b13 391 SUPERFAMILY SSF46785 4 70 5.27E-12 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS01860 7302c4ba799a38d8b5fb87f80c749b13 391 Gene3D G3DSA:3.30.420.40 73 210 7.3E-35 T 22-04-2016 AMK43_RS01860 7302c4ba799a38d8b5fb87f80c749b13 391 Gene3D G3DSA:1.10.10.10 10 70 1.4E-15 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS01860 7302c4ba799a38d8b5fb87f80c749b13 391 PANTHER PTHR18964:SF123 52 388 6.0E-55 T 22-04-2016 AMK43_RS01860 7302c4ba799a38d8b5fb87f80c749b13 391 PANTHER PTHR18964 52 388 6.0E-55 T 22-04-2016 AMK43_RS01860 7302c4ba799a38d8b5fb87f80c749b13 391 Pfam PF00480 ROK family 77 378 5.2E-50 T 22-04-2016 IPR000600 ROK family AMK43_RS01860 7302c4ba799a38d8b5fb87f80c749b13 391 ProSitePatterns PS01125 ROK family signature. 206 233 - T 22-04-2016 IPR000600 ROK family AMK43_RS01860 7302c4ba799a38d8b5fb87f80c749b13 391 Gene3D G3DSA:3.30.420.40 211 363 3.2E-34 T 22-04-2016 AMK43_RS01860 7302c4ba799a38d8b5fb87f80c749b13 391 SUPERFAMILY SSF53067 75 378 2.43E-46 T 22-04-2016 AMK43_RS01860 7302c4ba799a38d8b5fb87f80c749b13 391 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 50 3.1E-5 T 22-04-2016 AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 Gene3D G3DSA:1.10.3210.10 186 280 3.9E-65 T 22-04-2016 IPR006674 HD domain AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 Gene3D G3DSA:1.10.3210.10 28 138 3.9E-65 T 22-04-2016 IPR006674 HD domain AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 Pfam PF01966 HD domain 83 153 1.5E-7 T 22-04-2016 IPR006674 HD domain AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 Gene3D G3DSA:1.10.3410.10 281 397 5.6E-28 T 22-04-2016 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 PANTHER PTHR11373 46 158 1.8E-58 T 22-04-2016 AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 PANTHER PTHR11373 185 516 1.8E-58 T 22-04-2016 AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 SMART SM00471 79 294 1.8E-8 T 22-04-2016 IPR003607 HD/PDEase domain AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 46 513 1.9E-100 T 22-04-2016 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase GO:0000287|GO:0008832|GO:0046039 AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 PANTHER PTHR11373:SF29 46 158 1.8E-58 T 22-04-2016 AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 PANTHER PTHR11373:SF29 185 516 1.8E-58 T 22-04-2016 AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 Gene3D G3DSA:1.10.3550.10 398 515 1.0E-26 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 Gene3D G3DSA:1.10.3550.10 139 172 1.0E-26 T 22-04-2016 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal domain AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 SUPERFAMILY SSF109604 185 224 1.26E-59 T 22-04-2016 AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 SUPERFAMILY SSF109604 495 508 1.26E-59 T 22-04-2016 AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 SUPERFAMILY SSF109604 46 150 1.26E-59 T 22-04-2016 AMK43_RS05585 4a71811609d322f0d310061c65fbd24d 516 SUPERFAMILY SSF109604 263 439 1.26E-59 T 22-04-2016 AMK43_RS01260 815f6196f994185fb03954a73580a246 270 PANTHER PTHR10000 1 270 9.9E-64 T 22-04-2016 AMK43_RS01260 815f6196f994185fb03954a73580a246 270 PANTHER PTHR10000:SF8 1 270 9.9E-64 T 22-04-2016 AMK43_RS01260 815f6196f994185fb03954a73580a246 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 22-04-2016 IPR000150 Cof protein GO:0016787 AMK43_RS01260 815f6196f994185fb03954a73580a246 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 265 3.3E-59 T 22-04-2016 IPR000150 Cof protein GO:0016787 AMK43_RS01260 815f6196f994185fb03954a73580a246 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 238 1.8E-24 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 AMK43_RS01260 815f6196f994185fb03954a73580a246 270 Gene3D G3DSA:3.40.50.1000 1 76 5.7E-49 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS01260 815f6196f994185fb03954a73580a246 270 Gene3D G3DSA:3.40.50.1000 185 269 5.7E-49 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS01260 815f6196f994185fb03954a73580a246 270 SUPERFAMILY SSF56784 1 269 2.31E-70 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS01260 815f6196f994185fb03954a73580a246 270 Gene3D G3DSA:3.30.1240.10 88 184 1.2E-24 T 22-04-2016 AMK43_RS01260 815f6196f994185fb03954a73580a246 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 265 1.3E-63 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS08020 2d44529c9dd8955573ec45d0b644e5d9 281 PANTHER PTHR31302:SF6 1 281 5.5E-48 T 22-04-2016 AMK43_RS08020 2d44529c9dd8955573ec45d0b644e5d9 281 PANTHER PTHR31302 1 281 5.5E-48 T 22-04-2016 AMK43_RS08020 2d44529c9dd8955573ec45d0b644e5d9 281 SUPERFAMILY SSF56300 52 278 8.02E-29 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS08020 2d44529c9dd8955573ec45d0b644e5d9 281 Gene3D G3DSA:3.60.21.10 52 222 1.4E-21 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS08020 2d44529c9dd8955573ec45d0b644e5d9 281 Pfam PF00149 Calcineurin-like phosphoesterase 52 216 1.2E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK43_RS07245 75fbb822832439d6572d7a09a3c1d418 391 PANTHER PTHR21110:SF0 5 377 3.8E-130 T 22-04-2016 AMK43_RS07245 75fbb822832439d6572d7a09a3c1d418 391 Hamap MF_00740 Phosphopentomutase [deoB]. 4 391 48.077 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AMK43_RS07245 75fbb822832439d6572d7a09a3c1d418 391 TIGRFAM TIGR01696 deoB: phosphopentomutase 6 376 1.6E-146 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AMK43_RS07245 75fbb822832439d6572d7a09a3c1d418 391 Pfam PF01676 Metalloenzyme superfamily 6 377 3.5E-43 T 22-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 AMK43_RS07245 75fbb822832439d6572d7a09a3c1d418 391 SUPERFAMILY SSF53649 218 377 6.15E-70 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMK43_RS07245 75fbb822832439d6572d7a09a3c1d418 391 SUPERFAMILY SSF53649 4 101 6.15E-70 T 22-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 AMK43_RS07245 75fbb822832439d6572d7a09a3c1d418 391 PANTHER PTHR21110 5 377 3.8E-130 T 22-04-2016 AMK43_RS07245 75fbb822832439d6572d7a09a3c1d418 391 Gene3D G3DSA:3.30.70.1250 101 217 2.1E-48 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AMK43_RS07245 75fbb822832439d6572d7a09a3c1d418 391 Gene3D G3DSA:3.40.720.10 3 100 2.9E-72 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK43_RS07245 75fbb822832439d6572d7a09a3c1d418 391 Gene3D G3DSA:3.40.720.10 221 377 2.9E-72 T 22-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 AMK43_RS07245 75fbb822832439d6572d7a09a3c1d418 391 SUPERFAMILY SSF143856 101 217 1.83E-41 T 22-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AMK43_RS07245 75fbb822832439d6572d7a09a3c1d418 391 PIRSF PIRSF001491 3 391 5.9E-142 T 22-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 AMK43_RS03715 75c78f63f13acce62a2388757ac016d3 210 PANTHER PTHR37170 1 192 2.2E-22 T 22-04-2016 AMK43_RS03715 75c78f63f13acce62a2388757ac016d3 210 SUPERFAMILY SSF52833 117 207 2.72E-19 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS03715 75c78f63f13acce62a2388757ac016d3 210 Gene3D G3DSA:3.40.30.10 3 106 9.6E-30 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS03715 75c78f63f13acce62a2388757ac016d3 210 PANTHER PTHR37170:SF1 1 192 2.2E-22 T 22-04-2016 AMK43_RS03715 75c78f63f13acce62a2388757ac016d3 210 SUPERFAMILY SSF52833 3 111 2.68E-24 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS03715 75c78f63f13acce62a2388757ac016d3 210 Pfam PF13192 Thioredoxin domain 132 204 1.4E-10 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS03715 75c78f63f13acce62a2388757ac016d3 210 Gene3D G3DSA:3.40.30.10 116 207 1.8E-27 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS08770 09c346f06a35c993f492c20d08245792 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 30 46 3.1E-9 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK43_RS08770 09c346f06a35c993f492c20d08245792 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 333 348 3.1E-9 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK43_RS08770 09c346f06a35c993f492c20d08245792 373 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 52 68 3.1E-9 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK43_RS08770 09c346f06a35c993f492c20d08245792 373 SUPERFAMILY SSF53822 28 368 4.42E-84 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK43_RS08770 09c346f06a35c993f492c20d08245792 373 PANTHER PTHR30483:SF6 1 366 3.6E-88 T 22-04-2016 IPR000709 Leu/Ile/Val-binding protein GO:0006865 AMK43_RS08770 09c346f06a35c993f492c20d08245792 373 Pfam PF13458 Periplasmic binding protein 30 366 4.5E-66 T 22-04-2016 IPR028081 Leucine-binding protein domain AMK43_RS08770 09c346f06a35c993f492c20d08245792 373 PANTHER PTHR30483 1 366 3.6E-88 T 22-04-2016 AMK43_RS08770 09c346f06a35c993f492c20d08245792 373 Gene3D G3DSA:3.40.50.2300 29 225 2.9E-63 T 22-04-2016 AMK43_RS06320 c2ac845e787baeae6fceaed2ab180cb6 383 PANTHER PTHR11118 203 381 1.8E-84 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 AMK43_RS06320 c2ac845e787baeae6fceaed2ab180cb6 383 PANTHER PTHR11118 31 184 1.8E-84 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 AMK43_RS06320 c2ac845e787baeae6fceaed2ab180cb6 383 PANTHER PTHR11118:SF3 203 381 1.8E-84 T 22-04-2016 AMK43_RS06320 c2ac845e787baeae6fceaed2ab180cb6 383 PANTHER PTHR11118:SF3 31 184 1.8E-84 T 22-04-2016 AMK43_RS06320 c2ac845e787baeae6fceaed2ab180cb6 383 Pfam PF01139 tRNA-splicing ligase RtcB 127 381 8.6E-54 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 AMK43_RS06320 c2ac845e787baeae6fceaed2ab180cb6 383 Pfam PF01139 tRNA-splicing ligase RtcB 26 111 1.9E-13 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 AMK43_RS06320 c2ac845e787baeae6fceaed2ab180cb6 383 SUPERFAMILY SSF103365 26 381 2.35E-89 T 22-04-2016 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 AMK43_RS10745 e3f5a6cc6ee12c517039e5632abc0c6f 334 Gene3D G3DSA:2.60.120.200 68 333 4.2E-61 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMK43_RS10745 e3f5a6cc6ee12c517039e5632abc0c6f 334 SUPERFAMILY SSF49899 70 333 1.34E-55 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMK43_RS10745 e3f5a6cc6ee12c517039e5632abc0c6f 334 PANTHER PTHR10963 114 331 1.0E-29 T 22-04-2016 AMK43_RS10745 e3f5a6cc6ee12c517039e5632abc0c6f 334 PANTHER PTHR10963 63 97 1.0E-29 T 22-04-2016 AMK43_RS10745 e3f5a6cc6ee12c517039e5632abc0c6f 334 Pfam PF00722 Glycosyl hydrolases family 16 126 329 1.5E-23 T 22-04-2016 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 AMK43_RS00095 6972237badf904df8f391761cc373c1f 254 PANTHER PTHR10108 49 254 5.3E-52 T 22-04-2016 AMK43_RS00095 6972237badf904df8f391761cc373c1f 254 Gene3D G3DSA:3.40.50.150 46 231 9.4E-31 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS00095 6972237badf904df8f391761cc373c1f 254 Pfam PF08241 Methyltransferase domain 60 156 9.9E-16 T 22-04-2016 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 AMK43_RS00095 6972237badf904df8f391761cc373c1f 254 PANTHER PTHR10108:SF330 49 254 5.3E-52 T 22-04-2016 AMK43_RS00095 6972237badf904df8f391761cc373c1f 254 SUPERFAMILY SSF53335 49 236 3.1E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS01925 8302ae231c96b36b41a20ec81d9a9ed5 346 SUPERFAMILY SSF54211 19 227 1.21E-45 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS01925 8302ae231c96b36b41a20ec81d9a9ed5 346 TIGRFAM TIGR01220 Pmev_kin_Gr_pos: phosphomevalonate kinase 20 339 1.6E-66 T 22-04-2016 IPR005917 Phosphomevalonate kinase, Gram-positive KEGG: 00900+2.7.4.2|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 AMK43_RS01925 8302ae231c96b36b41a20ec81d9a9ed5 346 Pfam PF08544 GHMP kinases C terminal 272 335 3.1E-5 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain AMK43_RS01925 8302ae231c96b36b41a20ec81d9a9ed5 346 SUPERFAMILY SSF55060 214 342 8.15E-29 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain AMK43_RS01925 8302ae231c96b36b41a20ec81d9a9ed5 346 Gene3D G3DSA:3.30.230.10 19 207 3.1E-65 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS01925 8302ae231c96b36b41a20ec81d9a9ed5 346 Pfam PF00288 GHMP kinases N terminal domain 119 174 4.9E-7 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMK43_RS01925 8302ae231c96b36b41a20ec81d9a9ed5 346 Gene3D G3DSA:3.30.70.890 215 342 1.3E-37 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain AMK43_RS06450 d3d28a5131e5dbec32ef6efe43baa49a 354 Pfam PF02608 Basic membrane protein 39 346 1.3E-65 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 AMK43_RS06450 d3d28a5131e5dbec32ef6efe43baa49a 354 PANTHER PTHR34296:SF2 1 345 1.7E-97 T 22-04-2016 AMK43_RS06450 d3d28a5131e5dbec32ef6efe43baa49a 354 SUPERFAMILY SSF53822 39 287 2.87E-8 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK43_RS06450 d3d28a5131e5dbec32ef6efe43baa49a 354 Gene3D G3DSA:3.40.50.2300 143 310 1.5E-53 T 22-04-2016 AMK43_RS06450 d3d28a5131e5dbec32ef6efe43baa49a 354 PANTHER PTHR34296 1 345 1.7E-97 T 22-04-2016 AMK43_RS08970 e95a4d80b2113c480c0aec7c6f6e40cd 412 Pfam PF04261 Dyp-type peroxidase family 65 400 2.2E-101 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- AMK43_RS08970 e95a4d80b2113c480c0aec7c6f6e40cd 412 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 65 399 3.0E-88 T 22-04-2016 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 KEGG: 00480+1.11.1.- AMK43_RS08970 e95a4d80b2113c480c0aec7c6f6e40cd 412 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 12 412 3.6E-150 T 22-04-2016 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 KEGG: 00480+1.11.1.- AMK43_RS08970 e95a4d80b2113c480c0aec7c6f6e40cd 412 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 34 4.3E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMK43_RS08970 e95a4d80b2113c480c0aec7c6f6e40cd 412 PANTHER PTHR30521 48 412 2.6E-161 T 22-04-2016 AMK43_RS08970 e95a4d80b2113c480c0aec7c6f6e40cd 412 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 13 37 2.3E-6 T 22-04-2016 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal AMK43_RS08970 e95a4d80b2113c480c0aec7c6f6e40cd 412 PANTHER PTHR30521:SF4 48 412 2.6E-161 T 22-04-2016 AMK43_RS08970 e95a4d80b2113c480c0aec7c6f6e40cd 412 SUPERFAMILY SSF54909 60 406 2.32E-85 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel AMK43_RS01830 c1f2af7abc8f32613b195c1a734835e7 68 Gene3D G3DSA:1.10.10.10 2 67 1.2E-11 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS01830 c1f2af7abc8f32613b195c1a734835e7 68 SUPERFAMILY SSF46785 2 67 2.55E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 500 51.669 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 Gene3D G3DSA:3.40.50.300 96 371 8.8E-121 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 PIRSF PIRSF039088 1 501 3.7E-251 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 5.5E-79 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 501 4.9E-251 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 SUPERFAMILY SSF47917 372 499 2.88E-43 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 SUPERFAMILY SSF50615 10 94 6.8E-28 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 PANTHER PTHR15184 1 484 3.2E-298 T 22-04-2016 AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 Gene3D G3DSA:2.40.30.20 2 93 2.8E-36 T 22-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 PANTHER PTHR15184:SF3 1 484 3.2E-298 T 22-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 493 8.9E-48 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 8.1E-18 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 SUPERFAMILY SSF52540 96 370 2.54E-104 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07180 c5f7d654fad51145c9fda5b6e6ddd93b 501 Gene3D G3DSA:1.20.150.20 372 499 2.1E-50 T 22-04-2016 AMK43_RS02690 aca7cad3f6dd1e40988ac76a1c2f7b33 502 Pfam PF03606 C4-dicarboxylate anaerobic carrier 8 500 2.9E-136 T 22-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AMK43_RS02690 aca7cad3f6dd1e40988ac76a1c2f7b33 502 PANTHER PTHR10283:SF90 43 502 4.1E-188 T 22-04-2016 AMK43_RS02690 aca7cad3f6dd1e40988ac76a1c2f7b33 502 PANTHER PTHR10283 43 502 4.1E-188 T 22-04-2016 AMK43_RS06100 2a7088bf80b97181e79e32f12c0c42ab 356 Gene3D G3DSA:3.40.190.10 141 263 5.4E-12 T 22-04-2016 AMK43_RS06100 2a7088bf80b97181e79e32f12c0c42ab 356 Pfam PF09084 NMT1/THI5 like 82 278 3.5E-21 T 22-04-2016 IPR015168 SsuA/THI5-like AMK43_RS06100 2a7088bf80b97181e79e32f12c0c42ab 356 SMART SM00062 51 299 0.0011 T 22-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF AMK43_RS06100 2a7088bf80b97181e79e32f12c0c42ab 356 SUPERFAMILY SSF53850 48 279 3.37E-33 T 22-04-2016 AMK43_RS06100 2a7088bf80b97181e79e32f12c0c42ab 356 PANTHER PTHR30024 1 296 1.0E-21 T 22-04-2016 AMK43_RS08350 f5fc8530ef7dc2044d402cd2d9fc9c02 549 PANTHER PTHR31645:SF0 6 543 5.8E-22 T 22-04-2016 AMK43_RS08350 f5fc8530ef7dc2044d402cd2d9fc9c02 549 PANTHER PTHR31645 6 543 5.8E-22 T 22-04-2016 AMK43_RS08350 f5fc8530ef7dc2044d402cd2d9fc9c02 549 Pfam PF03169 OPT oligopeptide transporter protein 9 237 7.4E-21 T 22-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 AMK43_RS08350 f5fc8530ef7dc2044d402cd2d9fc9c02 549 Pfam PF03169 OPT oligopeptide transporter protein 273 542 2.6E-25 T 22-04-2016 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 AMK43_RS06790 649af9a3088d5347c0ad606e59c6a290 328 SUPERFAMILY SSF51569 10 319 1.76E-98 T 22-04-2016 AMK43_RS06790 649af9a3088d5347c0ad606e59c6a290 328 PANTHER PTHR30304 3 315 1.5E-118 T 22-04-2016 AMK43_RS06790 649af9a3088d5347c0ad606e59c6a290 328 PIRSF PIRSF001359 8 321 6.4E-96 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AMK43_RS06790 649af9a3088d5347c0ad606e59c6a290 328 Gene3D G3DSA:3.20.20.70 10 323 4.9E-109 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS06790 649af9a3088d5347c0ad606e59c6a290 328 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 11 319 6.0E-110 T 22-04-2016 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 AMK43_RS06790 649af9a3088d5347c0ad606e59c6a290 328 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 10 314 3.6E-90 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AMK43_RS06790 649af9a3088d5347c0ad606e59c6a290 328 Pfam PF01116 Fructose-bisphosphate aldolase class-II 12 319 4.2E-101 T 22-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 AMK43_RS10455 75ed7d7bd4cfb43adf5b43a83a6ee1fe 901 SUPERFAMILY SSF88713 8 273 4.18E-44 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK43_RS10455 75ed7d7bd4cfb43adf5b43a83a6ee1fe 901 Gene3D G3DSA:3.20.110.10 7 240 1.1E-39 T 22-04-2016 IPR027291 Glycoside hydrolase 38/57, N-terminal domain AMK43_RS10455 75ed7d7bd4cfb43adf5b43a83a6ee1fe 901 SUPERFAMILY SSF74650 379 431 4.71E-56 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AMK43_RS10455 75ed7d7bd4cfb43adf5b43a83a6ee1fe 901 SUPERFAMILY SSF74650 461 885 4.71E-56 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AMK43_RS10455 75ed7d7bd4cfb43adf5b43a83a6ee1fe 901 Gene3D G3DSA:1.20.1270.50 283 362 1.5E-4 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 AMK43_RS10455 75ed7d7bd4cfb43adf5b43a83a6ee1fe 901 PANTHER PTHR11607:SF26 13 433 1.9E-153 T 22-04-2016 AMK43_RS10455 75ed7d7bd4cfb43adf5b43a83a6ee1fe 901 PANTHER PTHR11607:SF26 457 725 1.9E-153 T 22-04-2016 AMK43_RS10455 75ed7d7bd4cfb43adf5b43a83a6ee1fe 901 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 13 263 3.2E-38 T 22-04-2016 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0005975 AMK43_RS10455 75ed7d7bd4cfb43adf5b43a83a6ee1fe 901 SMART SM00872 281 359 2.6E-5 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 AMK43_RS10455 75ed7d7bd4cfb43adf5b43a83a6ee1fe 901 PANTHER PTHR11607 13 433 1.9E-153 T 22-04-2016 AMK43_RS10455 75ed7d7bd4cfb43adf5b43a83a6ee1fe 901 PANTHER PTHR11607 457 725 1.9E-153 T 22-04-2016 AMK43_RS10455 75ed7d7bd4cfb43adf5b43a83a6ee1fe 901 Pfam PF09261 Alpha mannosidase middle domain 282 353 9.2E-7 T 22-04-2016 IPR015341 Glycoside hydrolase family 38, central domain GO:0004553|GO:0008270 AMK43_RS10455 75ed7d7bd4cfb43adf5b43a83a6ee1fe 901 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 388 849 5.1E-31 T 22-04-2016 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0006013|GO:0015923 AMK43_RS10455 75ed7d7bd4cfb43adf5b43a83a6ee1fe 901 SUPERFAMILY SSF88688 283 358 3.4E-5 T 22-04-2016 IPR028995 Glycoside hydrolase families 57/38, central domain AMK43_RS09525 a130eec8bf94e5c265834fc904c85b75 204 PANTHER PTHR33279 5 202 1.7E-40 T 22-04-2016 AMK43_RS09525 a130eec8bf94e5c265834fc904c85b75 204 SUPERFAMILY SSF64307 4 68 6.02E-10 T 22-04-2016 IPR001455 TusA-like domain AMK43_RS09525 a130eec8bf94e5c265834fc904c85b75 204 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 7 204 2.4E-58 T 22-04-2016 IPR019870 Selenium metabolism protein YedF AMK43_RS09525 a130eec8bf94e5c265834fc904c85b75 204 Pfam PF01206 Sulfurtransferase TusA 4 68 5.5E-11 T 22-04-2016 IPR001455 TusA-like domain AMK43_RS09525 a130eec8bf94e5c265834fc904c85b75 204 PANTHER PTHR33279:SF3 5 202 1.7E-40 T 22-04-2016 AMK43_RS09525 a130eec8bf94e5c265834fc904c85b75 204 Pfam PF02635 DsrE/DsrF-like family 97 202 7.9E-7 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein AMK43_RS09525 a130eec8bf94e5c265834fc904c85b75 204 Gene3D G3DSA:3.30.110.40 3 68 2.0E-11 T 22-04-2016 IPR001455 TusA-like domain AMK43_RS09525 a130eec8bf94e5c265834fc904c85b75 204 Gene3D G3DSA:3.40.1260.10 134 182 7.5E-10 T 22-04-2016 IPR027396 DsrEFH-like AMK43_RS09525 a130eec8bf94e5c265834fc904c85b75 204 SUPERFAMILY SSF75169 125 202 2.55E-10 T 22-04-2016 IPR027396 DsrEFH-like AMK43_RS02940 3b937bdd2ae52434bb9cce1ebf3a2ef8 281 SUPERFAMILY SSF161098 7 280 5.79E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS02940 3b937bdd2ae52434bb9cce1ebf3a2ef8 281 Gene3D G3DSA:1.10.3720.10 5 267 1.5E-52 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS02940 3b937bdd2ae52434bb9cce1ebf3a2ef8 281 PANTHER PTHR32243 1 281 2.6E-66 T 22-04-2016 AMK43_RS02940 3b937bdd2ae52434bb9cce1ebf3a2ef8 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 271 2.1E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS10920 be9ee22526ed925d106bf14ca765f519 558 SUPERFAMILY SSF161098 297 554 5.51E-42 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS10920 be9ee22526ed925d106bf14ca765f519 558 Gene3D G3DSA:1.10.3720.10 8 270 2.6E-45 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS10920 be9ee22526ed925d106bf14ca765f519 558 Gene3D G3DSA:1.10.3720.10 297 550 7.9E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS10920 be9ee22526ed925d106bf14ca765f519 558 PANTHER PTHR30193:SF5 1 286 2.5E-83 T 22-04-2016 AMK43_RS10920 be9ee22526ed925d106bf14ca765f519 558 PANTHER PTHR30193 1 286 2.5E-83 T 22-04-2016 AMK43_RS10920 be9ee22526ed925d106bf14ca765f519 558 SUPERFAMILY SSF161098 10 279 6.17E-51 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS10920 be9ee22526ed925d106bf14ca765f519 558 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 371 546 1.5E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS10920 be9ee22526ed925d106bf14ca765f519 558 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 278 1.1E-14 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09025 3a59575e3e5e2d80fdc4894c1545e3b3 414 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 367 389 7.3E-55 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK43_RS09025 3a59575e3e5e2d80fdc4894c1545e3b3 414 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 18 35 7.3E-55 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK43_RS09025 3a59575e3e5e2d80fdc4894c1545e3b3 414 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 249 268 7.3E-55 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK43_RS09025 3a59575e3e5e2d80fdc4894c1545e3b3 414 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 328 349 7.3E-55 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK43_RS09025 3a59575e3e5e2d80fdc4894c1545e3b3 414 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 305 325 7.3E-55 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK43_RS09025 3a59575e3e5e2d80fdc4894c1545e3b3 414 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 393 412 7.3E-55 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK43_RS09025 3a59575e3e5e2d80fdc4894c1545e3b3 414 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 83 102 7.3E-55 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK43_RS09025 3a59575e3e5e2d80fdc4894c1545e3b3 414 Pfam PF02073 Thermophilic metalloprotease (M29) 7 412 7.2E-165 T 22-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 AMK43_RS09025 3a59575e3e5e2d80fdc4894c1545e3b3 414 SUPERFAMILY SSF144052 7 413 5.75E-135 T 22-04-2016 AMK43_RS09025 3a59575e3e5e2d80fdc4894c1545e3b3 414 PANTHER PTHR34448 3 414 2.3E-209 T 22-04-2016 AMK43_RS09025 3a59575e3e5e2d80fdc4894c1545e3b3 414 PANTHER PTHR34448:SF3 3 414 2.3E-209 T 22-04-2016 AMK43_RS03070 74c6e724155ecb9fb3942da5d04ecd40 231 Gene3D G3DSA:1.10.150.240 15 95 1.2E-18 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AMK43_RS03070 74c6e724155ecb9fb3942da5d04ecd40 231 SUPERFAMILY SSF56784 1 231 1.18E-47 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS03070 74c6e724155ecb9fb3942da5d04ecd40 231 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 2 231 1.5E-66 T 22-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 AMK43_RS03070 74c6e724155ecb9fb3942da5d04ecd40 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 204 2.2E-28 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS03070 74c6e724155ecb9fb3942da5d04ecd40 231 PANTHER PTHR12725:SF57 2 231 3.2E-45 T 22-04-2016 AMK43_RS03070 74c6e724155ecb9fb3942da5d04ecd40 231 PANTHER PTHR12725 2 231 3.2E-45 T 22-04-2016 AMK43_RS03070 74c6e724155ecb9fb3942da5d04ecd40 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 92 198 2.3E-13 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK43_RS03070 74c6e724155ecb9fb3942da5d04ecd40 231 Gene3D G3DSA:3.40.50.1000 96 231 1.2E-41 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS04455 1d1cb455804101619f0ae00588489939 261 Gene3D G3DSA:3.40.50.300 1 235 1.8E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04455 1d1cb455804101619f0ae00588489939 261 PANTHER PTHR24220 3 248 1.5E-113 T 22-04-2016 AMK43_RS04455 1d1cb455804101619f0ae00588489939 261 SUPERFAMILY SSF52540 1 234 2.77E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04455 1d1cb455804101619f0ae00588489939 261 PANTHER PTHR24220:SF534 3 248 1.5E-113 T 22-04-2016 AMK43_RS04455 1d1cb455804101619f0ae00588489939 261 Pfam PF00005 ABC transporter 23 177 5.9E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS04455 1d1cb455804101619f0ae00588489939 261 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS04455 1d1cb455804101619f0ae00588489939 261 SMART SM00382 31 234 3.2E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 818 1247 6.4E-96 T 22-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 PANTHER PTHR23044:SF26 819 904 0.0 T 22-04-2016 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 PANTHER PTHR23044:SF26 20 544 0.0 T 22-04-2016 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 PANTHER PTHR23044:SF26 1103 1412 0.0 T 22-04-2016 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 PANTHER PTHR23044:SF26 920 1065 0.0 T 22-04-2016 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 Gene3D G3DSA:1.10.150.280 1374 1424 3.4E-8 T 22-04-2016 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 SUPERFAMILY SSF53098 412 870 2.2E-85 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 SMART SM00481 327 393 1.9E-20 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1436 322.294 T 22-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 Pfam PF14579 Helix-hairpin-helix motif 1349 1433 5.8E-15 T 22-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 231 1436 0.0 T 22-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 Gene3D G3DSA:1.20.5.140 549 584 6.3E-17 T 22-04-2016 IPR023223 DNA polymerase III/inhibitor IA3, alpha-helix domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 PANTHER PTHR23044 819 904 0.0 T 22-04-2016 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 PANTHER PTHR23044 20 544 0.0 T 22-04-2016 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 PANTHER PTHR23044 1103 1412 0.0 T 22-04-2016 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 PANTHER PTHR23044 920 1065 0.0 T 22-04-2016 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 Gene3D G3DSA:3.30.420.10 409 548 1.5E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 Gene3D G3DSA:3.20.20.140 325 408 2.1E-42 T 22-04-2016 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 Gene3D G3DSA:3.20.20.140 617 789 2.1E-42 T 22-04-2016 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 Pfam PF02811 PHP domain 328 688 3.7E-39 T 22-04-2016 IPR004013 PHP domain GO:0003824 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 Gene3D G3DSA:2.40.50.140 222 314 6.8E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 405 623 7.3E-40 T 22-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 Pfam PF00929 Exonuclease 413 567 2.1E-39 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK43_RS07475 712e3ff50a55357c9d8309236229f0f9 1436 SMART SM00479 411 576 1.0E-49 T 22-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III AMK43_RS02915 bdbacdf9d29438b12e8feda973081bdc 476 Pfam PF02378 Phosphotransferase system, EIIC 9 315 3.2E-70 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMK43_RS02915 bdbacdf9d29438b12e8feda973081bdc 476 PANTHER PTHR30009:SF4 2 475 2.2E-208 T 22-04-2016 AMK43_RS02915 bdbacdf9d29438b12e8feda973081bdc 476 Gene3D G3DSA:3.30.1360.60 400 475 5.3E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS02915 bdbacdf9d29438b12e8feda973081bdc 476 SUPERFAMILY SSF55604 404 475 2.35E-18 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS02915 bdbacdf9d29438b12e8feda973081bdc 476 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 474 1.5E-191 T 22-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 AMK43_RS02915 bdbacdf9d29438b12e8feda973081bdc 476 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 375 463 2.8E-19 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS02915 bdbacdf9d29438b12e8feda973081bdc 476 Pfam PF00367 phosphotransferase system, EIIB 407 439 8.4E-16 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMK43_RS02915 bdbacdf9d29438b12e8feda973081bdc 476 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 417 434 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMK43_RS02915 bdbacdf9d29438b12e8feda973081bdc 476 PANTHER PTHR30009 2 475 2.2E-208 T 22-04-2016 AMK43_RS01285 6e7c96d3722ec95de457c1d9c6ec28a0 195 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 87 4.2E-19 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AMK43_RS01285 6e7c96d3722ec95de457c1d9c6ec28a0 195 SUPERFAMILY SSF55174 3 195 1.57E-57 T 22-04-2016 AMK43_RS01285 6e7c96d3722ec95de457c1d9c6ec28a0 195 Pfam PF01479 S4 domain 88 135 6.4E-23 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS01285 6e7c96d3722ec95de457c1d9c6ec28a0 195 PANTHER PTHR11831:SF4 1 195 9.1E-74 T 22-04-2016 AMK43_RS01285 6e7c96d3722ec95de457c1d9c6ec28a0 195 Gene3D G3DSA:3.10.290.10 92 186 8.7E-32 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS01285 6e7c96d3722ec95de457c1d9c6ec28a0 195 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 195 31.515 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK43_RS01285 6e7c96d3722ec95de457c1d9c6ec28a0 195 PANTHER PTHR11831 1 195 9.1E-74 T 22-04-2016 IPR022801 Ribosomal protein S4/S9 AMK43_RS01285 6e7c96d3722ec95de457c1d9c6ec28a0 195 SMART SM01390 3 87 1.9E-25 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AMK43_RS01285 6e7c96d3722ec95de457c1d9c6ec28a0 195 ProSitePatterns PS00632 Ribosomal protein S4 signature. 86 110 - T 22-04-2016 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 AMK43_RS01285 6e7c96d3722ec95de457c1d9c6ec28a0 195 Gene3D G3DSA:1.10.1050.10 1 91 4.9E-31 T 22-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 AMK43_RS01285 6e7c96d3722ec95de457c1d9c6ec28a0 195 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 5 195 1.2E-67 T 22-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK43_RS01285 6e7c96d3722ec95de457c1d9c6ec28a0 195 SMART SM00363 88 152 1.7E-22 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS11280 503bb5845eda1a7da92d11de3ac5c654 528 SUPERFAMILY SSF53448 253 290 7.41E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11280 503bb5845eda1a7da92d11de3ac5c654 528 SUPERFAMILY SSF53448 317 376 7.41E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11280 503bb5845eda1a7da92d11de3ac5c654 528 SUPERFAMILY SSF53448 420 491 7.41E-36 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11280 503bb5845eda1a7da92d11de3ac5c654 528 Pfam PF02709 N-terminal domain of galactosyltransferase 423 483 2.3E-16 T 22-04-2016 IPR027791 Galactosyltransferase, C-terminal UniPathway: UPA00378 AMK43_RS11280 503bb5845eda1a7da92d11de3ac5c654 528 SUPERFAMILY SSF53448 1 141 5.12E-22 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11280 503bb5845eda1a7da92d11de3ac5c654 528 Gene3D G3DSA:3.90.550.10 253 514 7.4E-49 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11280 503bb5845eda1a7da92d11de3ac5c654 528 Gene3D G3DSA:3.90.550.10 1 177 4.8E-14 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11280 503bb5845eda1a7da92d11de3ac5c654 528 Pfam PF00535 Glycosyl transferase family 2 256 405 7.6E-23 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK43_RS11280 503bb5845eda1a7da92d11de3ac5c654 528 Pfam PF00535 Glycosyl transferase family 2 4 93 5.8E-17 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK43_RS11280 503bb5845eda1a7da92d11de3ac5c654 528 PANTHER PTHR22916 417 466 3.8E-31 T 22-04-2016 AMK43_RS11280 503bb5845eda1a7da92d11de3ac5c654 528 PANTHER PTHR22916 201 393 3.8E-31 T 22-04-2016 AMK43_RS08785 9f17f4a3a6c73eff0e4df386a5abd089 252 SUPERFAMILY SSF52540 3 250 3.15E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08785 9f17f4a3a6c73eff0e4df386a5abd089 252 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS08785 9f17f4a3a6c73eff0e4df386a5abd089 252 PANTHER PTHR24220 5 103 5.6E-115 T 22-04-2016 AMK43_RS08785 9f17f4a3a6c73eff0e4df386a5abd089 252 PANTHER PTHR24220 119 252 5.6E-115 T 22-04-2016 AMK43_RS08785 9f17f4a3a6c73eff0e4df386a5abd089 252 SMART SM00382 28 228 2.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS08785 9f17f4a3a6c73eff0e4df386a5abd089 252 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 229 251 8.3E-11 T 22-04-2016 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal AMK43_RS08785 9f17f4a3a6c73eff0e4df386a5abd089 252 Gene3D G3DSA:3.40.50.300 3 249 3.5E-68 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08785 9f17f4a3a6c73eff0e4df386a5abd089 252 PANTHER PTHR24220:SF358 5 103 5.6E-115 T 22-04-2016 AMK43_RS08785 9f17f4a3a6c73eff0e4df386a5abd089 252 PANTHER PTHR24220:SF358 119 252 5.6E-115 T 22-04-2016 AMK43_RS08785 9f17f4a3a6c73eff0e4df386a5abd089 252 Pfam PF00005 ABC transporter 20 179 5.3E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS05070 4cfc92f574d37af39a037236a555f97a 206 Gene3D G3DSA:3.60.15.10 2 192 1.8E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS05070 4cfc92f574d37af39a037236a555f97a 206 PANTHER PTHR11935 14 188 4.0E-46 T 22-04-2016 AMK43_RS05070 4cfc92f574d37af39a037236a555f97a 206 SMART SM00849 12 187 9.8E-39 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS05070 4cfc92f574d37af39a037236a555f97a 206 Pfam PF00753 Metallo-beta-lactamase superfamily 12 187 3.7E-32 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS05070 4cfc92f574d37af39a037236a555f97a 206 SUPERFAMILY SSF56281 10 193 1.31E-47 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 PANTHER PTHR30477:SF15 4 293 4.7E-72 T 22-04-2016 AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 PRINTS PR00691 Adhesin B signature 122 141 1.6E-6 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 PRINTS PR00691 Adhesin B signature 65 84 1.6E-6 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 PRINTS PR00691 Adhesin B signature 269 287 1.6E-6 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 PRINTS PR00691 Adhesin B signature 20 41 1.6E-6 T 22-04-2016 IPR006129 Adhesin B GO:0007155 AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 Pfam PF01297 Zinc-uptake complex component A periplasmic 24 288 9.7E-48 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 SUPERFAMILY SSF53807 20 290 1.37E-59 T 22-04-2016 AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 PRINTS PR00690 Adhesin family signature 180 201 2.1E-7 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 PRINTS PR00690 Adhesin family signature 233 251 2.1E-7 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 PRINTS PR00690 Adhesin family signature 52 65 2.1E-7 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 PRINTS PR00690 Adhesin family signature 65 82 2.1E-7 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 PRINTS PR00690 Adhesin family signature 20 38 2.1E-7 T 22-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 PANTHER PTHR30477 4 293 4.7E-72 T 22-04-2016 AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 Gene3D G3DSA:3.40.50.1980 172 290 1.2E-23 T 22-04-2016 AMK43_RS04050 3cdddc6e4eb717b65198935374de15ac 299 Gene3D G3DSA:3.40.50.1980 17 171 1.6E-32 T 22-04-2016 AMK43_RS09310 a60f913eb3f5b45e1adaed7acf346363 958 Pfam PF02272 DHHA1 domain 383 448 2.2E-11 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 AMK43_RS09310 a60f913eb3f5b45e1adaed7acf346363 958 PANTHER PTHR30255 1 577 5.8E-216 T 22-04-2016 AMK43_RS09310 a60f913eb3f5b45e1adaed7acf346363 958 SUPERFAMILY SSF64182 54 463 6.15E-106 T 22-04-2016 AMK43_RS09310 a60f913eb3f5b45e1adaed7acf346363 958 PANTHER PTHR30255:SF2 1 577 5.8E-216 T 22-04-2016 AMK43_RS09310 a60f913eb3f5b45e1adaed7acf346363 958 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 28 572 5.6E-161 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AMK43_RS09310 a60f913eb3f5b45e1adaed7acf346363 958 Pfam PF01368 DHH family 80 205 2.1E-10 T 22-04-2016 IPR001667 DDH domain AMK43_RS07940 3b6440032469f7821188188b1c194f93 244 Pfam PF00005 ABC transporter 22 168 8.7E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS07940 3b6440032469f7821188188b1c194f93 244 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS07940 3b6440032469f7821188188b1c194f93 244 PANTHER PTHR24220:SF497 8 240 3.0E-139 T 22-04-2016 AMK43_RS07940 3b6440032469f7821188188b1c194f93 244 PANTHER PTHR24220 8 240 3.0E-139 T 22-04-2016 AMK43_RS07940 3b6440032469f7821188188b1c194f93 244 Gene3D G3DSA:3.40.50.300 3 235 4.3E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07940 3b6440032469f7821188188b1c194f93 244 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 7 243 6.6E-111 T 22-04-2016 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 AMK43_RS07940 3b6440032469f7821188188b1c194f93 244 SUPERFAMILY SSF52540 6 238 1.61E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07940 3b6440032469f7821188188b1c194f93 244 SMART SM00382 31 241 1.6E-8 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS05785 e3cb53e08785d5d16189ca4b62e29587 228 Pfam PF02616 Segregation and condensation protein ScpA 19 216 3.4E-14 T 22-04-2016 IPR003768 Segregation and condensation protein A AMK43_RS05785 e3cb53e08785d5d16189ca4b62e29587 228 PANTHER PTHR33969 1 215 1.9E-32 T 22-04-2016 AMK43_RS05785 e3cb53e08785d5d16189ca4b62e29587 228 PANTHER PTHR33969:SF2 1 215 1.9E-32 T 22-04-2016 AMK43_RS00790 5fdc99eb659151d7b008aa3f8bf5abbe 242 Pfam PF02654 Cobalamin-5-phosphate synthase 9 235 5.1E-55 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK43_RS00790 5fdc99eb659151d7b008aa3f8bf5abbe 242 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 1 237 3.9E-49 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK43_RS00790 5fdc99eb659151d7b008aa3f8bf5abbe 242 PANTHER PTHR34148 1 241 2.6E-55 T 22-04-2016 AMK43_RS00790 5fdc99eb659151d7b008aa3f8bf5abbe 242 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 242 36.299 T 22-04-2016 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK43_RS00790 5fdc99eb659151d7b008aa3f8bf5abbe 242 PANTHER PTHR34148:SF1 1 241 2.6E-55 T 22-04-2016 AMK43_RS11130 5cf1ad73903e60ae1663bc88dbafeb16 62 Pfam PF04138 GtrA-like protein 6 61 1.4E-14 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AMK43_RS07535 8acdc3c8d08950527d902986f3d09631 143 PANTHER PTHR12231 62 142 2.2E-14 T 22-04-2016 AMK43_RS07535 8acdc3c8d08950527d902986f3d09631 143 PANTHER PTHR12231:SF91 62 142 2.2E-14 T 22-04-2016 AMK43_RS07535 8acdc3c8d08950527d902986f3d09631 143 SUPERFAMILY SSF52821 39 140 6.68E-30 T 22-04-2016 IPR001763 Rhodanese-like domain AMK43_RS07535 8acdc3c8d08950527d902986f3d09631 143 SMART SM00450 47 143 1.3E-24 T 22-04-2016 IPR001763 Rhodanese-like domain AMK43_RS07535 8acdc3c8d08950527d902986f3d09631 143 Pfam PF00581 Rhodanese-like domain 49 138 2.4E-18 T 22-04-2016 IPR001763 Rhodanese-like domain AMK43_RS07535 8acdc3c8d08950527d902986f3d09631 143 Gene3D G3DSA:3.40.250.10 46 140 9.0E-32 T 22-04-2016 IPR001763 Rhodanese-like domain AMK43_RS01360 698ec3e63670171fddecf544aeeaac82 120 SUPERFAMILY SSF81301 10 108 7.19E-28 T 22-04-2016 AMK43_RS01360 698ec3e63670171fddecf544aeeaac82 120 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 14 106 5.8E-28 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMK43_RS01360 698ec3e63670171fddecf544aeeaac82 120 Pfam PF02410 Ribosomal silencing factor during starvation 15 106 3.2E-25 T 22-04-2016 AMK43_RS01360 698ec3e63670171fddecf544aeeaac82 120 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 9 107 20.1 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMK43_RS01360 698ec3e63670171fddecf544aeeaac82 120 PANTHER PTHR21043 12 108 4.3E-26 T 22-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS AMK43_RS01360 698ec3e63670171fddecf544aeeaac82 120 Gene3D G3DSA:3.30.460.10 10 107 1.7E-28 T 22-04-2016 AMK43_RS03780 9b49fde7863c4375812adc85ce35cfd4 225 Gene3D G3DSA:3.40.50.1580 1 224 6.0E-73 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK43_RS03780 9b49fde7863c4375812adc85ce35cfd4 225 PANTHER PTHR21234 3 225 1.0E-47 T 22-04-2016 IPR018017 Nucleoside phosphorylase AMK43_RS03780 9b49fde7863c4375812adc85ce35cfd4 225 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 3 224 2.8E-51 T 22-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 AMK43_RS03780 9b49fde7863c4375812adc85ce35cfd4 225 PANTHER PTHR21234:SF16 3 225 1.0E-47 T 22-04-2016 AMK43_RS03780 9b49fde7863c4375812adc85ce35cfd4 225 SUPERFAMILY SSF53167 2 224 1.7E-64 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK43_RS03780 9b49fde7863c4375812adc85ce35cfd4 225 Pfam PF01048 Phosphorylase superfamily 3 224 6.7E-55 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK43_RS02000 7e452177c05ddaf1d6eb5e4bcdbc0352 249 Gene3D G3DSA:3.40.50.150 72 249 1.8E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS02000 7e452177c05ddaf1d6eb5e4bcdbc0352 249 Pfam PF01209 ubiE/COQ5 methyltransferase family 74 190 7.6E-14 T 22-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 AMK43_RS02000 7e452177c05ddaf1d6eb5e4bcdbc0352 249 PANTHER PTHR10108 42 191 2.6E-18 T 22-04-2016 AMK43_RS02000 7e452177c05ddaf1d6eb5e4bcdbc0352 249 SUPERFAMILY SSF53335 46 224 1.96E-24 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 Pfam PF04545 Sigma-70, region 4 214 263 1.2E-17 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 PANTHER PTHR30603 9 264 6.7E-77 T 22-04-2016 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 Gene3D G3DSA:1.10.10.10 211 268 1.4E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 PANTHER PTHR30603:SF0 9 264 6.7E-77 T 22-04-2016 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 PRINTS PR00046 Major sigma-70 factor signature 251 262 7.7E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 PRINTS PR00046 Major sigma-70 factor signature 236 251 7.7E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 PRINTS PR00046 Major sigma-70 factor signature 215 227 7.7E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 PRINTS PR00046 Major sigma-70 factor signature 94 102 7.7E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 PRINTS PR00046 Major sigma-70 factor signature 70 83 7.7E-28 T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 PIRSF PIRSF000770 12 272 9.6E-44 T 22-04-2016 IPR016263 RNA polymerase sporulation-specific sigma factor GO:0003677|GO:0006351|GO:0016987|GO:0030435 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 70 83 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 236 262 - T 22-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 Pfam PF00140 Sigma-70 factor, region 1.2 9 39 4.0E-7 T 22-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 Gene3D G3DSA:1.10.601.10 7 113 3.4E-46 T 22-04-2016 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 Pfam PF04539 Sigma-70 region 3 125 181 5.4E-6 T 22-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 SUPERFAMILY SSF88946 8 115 2.67E-41 T 22-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 Gene3D G3DSA:1.10.10.10 116 165 1.9E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 42 265 1.1E-34 T 22-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 Pfam PF04542 Sigma-70 region 2 46 110 1.0E-17 T 22-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 SUPERFAMILY SSF88659 179 268 2.99E-20 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS06190 f4512d114e51bb374bbbc9e2dc82763d 273 SUPERFAMILY SSF88659 119 181 6.1E-8 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS05025 6d3ac41979afd69e988336067f6b9e90 380 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 59 279 1.9E-63 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 AMK43_RS05025 6d3ac41979afd69e988336067f6b9e90 380 Pfam PF02481 DNA recombination-mediator protein A 62 272 2.0E-66 T 22-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 AMK43_RS05025 6d3ac41979afd69e988336067f6b9e90 380 PANTHER PTHR32039 15 378 6.2E-75 T 22-04-2016 AMK43_RS05025 6d3ac41979afd69e988336067f6b9e90 380 SUPERFAMILY SSF102405 73 279 1.69E-25 T 22-04-2016 AMK43_RS05025 6d3ac41979afd69e988336067f6b9e90 380 PANTHER PTHR32039:SF8 15 378 6.2E-75 T 22-04-2016 AMK43_RS05025 6d3ac41979afd69e988336067f6b9e90 380 Gene3D G3DSA:3.40.50.450 105 224 2.5E-6 T 22-04-2016 AMK43_RS07290 5c0aa7d73ac9b7ff0cd55ecdaef27318 434 SUPERFAMILY SSF54680 333 433 2.22E-28 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 AMK43_RS07290 5c0aa7d73ac9b7ff0cd55ecdaef27318 434 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 66 9.2E-22 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AMK43_RS07290 5c0aa7d73ac9b7ff0cd55ecdaef27318 434 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 418 1.9E-23 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 AMK43_RS07290 5c0aa7d73ac9b7ff0cd55ecdaef27318 434 SUPERFAMILY SSF47648 1 69 1.07E-21 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AMK43_RS07290 5c0aa7d73ac9b7ff0cd55ecdaef27318 434 Gene3D G3DSA:1.20.970.10 1 67 1.6E-28 T 22-04-2016 AMK43_RS07290 5c0aa7d73ac9b7ff0cd55ecdaef27318 434 Pfam PF00591 Glycosyl transferase family, a/b domain 78 305 9.0E-31 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK43_RS07290 5c0aa7d73ac9b7ff0cd55ecdaef27318 434 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 4 418 6.3E-161 T 22-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 AMK43_RS07290 5c0aa7d73ac9b7ff0cd55ecdaef27318 434 PIRSF PIRSF000478 1 434 9.0E-153 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 AMK43_RS07290 5c0aa7d73ac9b7ff0cd55ecdaef27318 434 PANTHER PTHR10515:SF0 1 434 8.5E-175 T 22-04-2016 AMK43_RS07290 5c0aa7d73ac9b7ff0cd55ecdaef27318 434 Gene3D G3DSA:3.40.1030.10 71 335 8.3E-96 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK43_RS07290 5c0aa7d73ac9b7ff0cd55ecdaef27318 434 PANTHER PTHR10515 1 434 8.5E-175 T 22-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 AMK43_RS07290 5c0aa7d73ac9b7ff0cd55ecdaef27318 434 SMART SM00941 345 419 1.9E-28 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 AMK43_RS07290 5c0aa7d73ac9b7ff0cd55ecdaef27318 434 Gene3D G3DSA:3.90.1170.30 336 423 4.3E-30 T 22-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 AMK43_RS07290 5c0aa7d73ac9b7ff0cd55ecdaef27318 434 SUPERFAMILY SSF52418 69 337 5.36E-77 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK43_RS10345 9a08699d441d912e47a7c75509f790dd 660 SUPERFAMILY SSF54211 201 316 5.69E-26 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS10345 9a08699d441d912e47a7c75509f790dd 660 PANTHER PTHR10073 4 660 4.6E-144 T 22-04-2016 AMK43_RS10345 9a08699d441d912e47a7c75509f790dd 660 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 140 2.2E-13 T 22-04-2016 AMK43_RS10345 9a08699d441d912e47a7c75509f790dd 660 Gene3D G3DSA:3.30.565.10 4 202 1.9E-64 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS10345 9a08699d441d912e47a7c75509f790dd 660 SMART SM00853 477 617 5.8E-40 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AMK43_RS10345 9a08699d441d912e47a7c75509f790dd 660 Pfam PF08676 MutL C terminal dimerisation domain 477 617 9.2E-38 T 22-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 AMK43_RS10345 9a08699d441d912e47a7c75509f790dd 660 SUPERFAMILY SSF118116 476 658 6.93E-47 T 22-04-2016 AMK43_RS10345 9a08699d441d912e47a7c75509f790dd 660 SUPERFAMILY SSF55874 4 199 6.71E-46 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS10345 9a08699d441d912e47a7c75509f790dd 660 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 4 296 5.0E-88 T 22-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 AMK43_RS10345 9a08699d441d912e47a7c75509f790dd 660 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 22-04-2016 IPR014762 DNA mismatch repair, conserved site AMK43_RS10345 9a08699d441d912e47a7c75509f790dd 660 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 224 315 4.7E-28 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK43_RS10345 9a08699d441d912e47a7c75509f790dd 660 Gene3D G3DSA:3.30.230.10 203 316 2.8E-29 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS10345 9a08699d441d912e47a7c75509f790dd 660 SMART SM01340 207 317 4.7E-39 T 22-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 AMK43_RS10345 9a08699d441d912e47a7c75509f790dd 660 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 656 23.651 T 22-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 AMK43_RS00285 ded766c5a5e676acf17af9f0a1ee2e7c 456 Gene3D G3DSA:3.40.50.720 2 76 9.2E-9 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS00285 ded766c5a5e676acf17af9f0a1ee2e7c 456 Gene3D G3DSA:3.40.1190.10 79 309 8.9E-44 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS00285 ded766c5a5e676acf17af9f0a1ee2e7c 456 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 2 453 28.381 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS00285 ded766c5a5e676acf17af9f0a1ee2e7c 456 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 4 451 2.7E-100 T 22-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS00285 ded766c5a5e676acf17af9f0a1ee2e7c 456 Gene3D G3DSA:3.90.190.20 313 449 8.5E-36 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK43_RS00285 ded766c5a5e676acf17af9f0a1ee2e7c 456 SUPERFAMILY SSF53244 312 453 1.46E-29 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK43_RS00285 ded766c5a5e676acf17af9f0a1ee2e7c 456 PANTHER PTHR23135 1 455 4.8E-113 T 22-04-2016 AMK43_RS00285 ded766c5a5e676acf17af9f0a1ee2e7c 456 SUPERFAMILY SSF53623 83 307 2.14E-37 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS00285 ded766c5a5e676acf17af9f0a1ee2e7c 456 PANTHER PTHR23135:SF2 1 455 4.8E-113 T 22-04-2016 AMK43_RS00285 ded766c5a5e676acf17af9f0a1ee2e7c 456 Pfam PF08245 Mur ligase middle domain 97 291 2.5E-29 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS00285 ded766c5a5e676acf17af9f0a1ee2e7c 456 SUPERFAMILY SSF51984 1 78 2.22E-8 T 22-04-2016 AMK43_RS08555 8422bdbc163d0dc7cf9f5aefe7a2c8f9 219 SUPERFAMILY SSF53639 3 208 2.16E-55 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMK43_RS08555 8422bdbc163d0dc7cf9f5aefe7a2c8f9 219 PANTHER PTHR22789 1 208 3.6E-63 T 22-04-2016 AMK43_RS08555 8422bdbc163d0dc7cf9f5aefe7a2c8f9 219 SMART SM01007 7 188 2.1E-57 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMK43_RS08555 8422bdbc163d0dc7cf9f5aefe7a2c8f9 219 PANTHER PTHR22789:SF0 1 208 3.6E-63 T 22-04-2016 AMK43_RS08555 8422bdbc163d0dc7cf9f5aefe7a2c8f9 219 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 187 4.7E-46 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMK43_RS08555 8422bdbc163d0dc7cf9f5aefe7a2c8f9 219 Gene3D G3DSA:3.40.225.10 1 196 1.6E-63 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 Hamap MF_00242 Arginine deiminase [arcA]. 1 405 42.239 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 Gene3D G3DSA:3.75.10.10 3 65 3.6E-127 T 22-04-2016 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 Gene3D G3DSA:3.75.10.10 153 404 3.6E-127 T 22-04-2016 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 Gene3D G3DSA:1.10.3930.10 67 152 1.8E-19 T 22-04-2016 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 SUPERFAMILY SSF55909 2 405 7.07E-127 T 22-04-2016 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 2.8E-55 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 2.8E-55 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 PRINTS PR01466 Bacterial arginine deiminase signature 152 170 2.8E-55 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 PRINTS PR01466 Bacterial arginine deiminase signature 1 21 2.8E-55 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 2.8E-55 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 PRINTS PR01466 Bacterial arginine deiminase signature 180 195 2.8E-55 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 PANTHER PTHR12737 152 291 7.8E-110 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 PANTHER PTHR12737 310 405 7.8E-110 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 PANTHER PTHR12737 3 91 7.8E-110 T 22-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 PIRSF PIRSF006356 1 405 3.7E-165 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 Pfam PF02274 Amidinotransferase 17 403 3.8E-91 T 22-04-2016 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 PANTHER PTHR12737:SF13 152 291 7.8E-110 T 22-04-2016 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 PANTHER PTHR12737:SF13 310 405 7.8E-110 T 22-04-2016 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 PANTHER PTHR12737:SF13 3 91 7.8E-110 T 22-04-2016 AMK43_RS05975 f46d56d04b94f163f4cd9b11d3264fec 405 TIGRFAM TIGR01078 arcA: arginine deiminase 3 405 5.2E-157 T 22-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 AMK43_RS06225 a54c17d3f255a4f7b60596e2ac18d932 141 Gene3D G3DSA:3.10.129.10 2 139 9.8E-55 T 22-04-2016 IPR029069 HotDog domain AMK43_RS06225 a54c17d3f255a4f7b60596e2ac18d932 141 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 5 140 32.919 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMK43_RS06225 a54c17d3f255a4f7b60596e2ac18d932 141 SUPERFAMILY SSF54637 7 138 1.91E-46 T 22-04-2016 IPR029069 HotDog domain AMK43_RS06225 a54c17d3f255a4f7b60596e2ac18d932 141 PANTHER PTHR30272 1 141 4.6E-73 T 22-04-2016 AMK43_RS06225 a54c17d3f255a4f7b60596e2ac18d932 141 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 5 138 4.2E-54 T 22-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMK43_RS06225 a54c17d3f255a4f7b60596e2ac18d932 141 Pfam PF07977 FabA-like domain 14 132 2.6E-34 T 22-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 AMK43_RS07085 fcbfedd97e735a0e6154c1fd6ad6f8c8 524 SMART SM00471 335 442 3.8E-15 T 22-04-2016 IPR003607 HD/PDEase domain AMK43_RS07085 fcbfedd97e735a0e6154c1fd6ad6f8c8 524 Pfam PF12072 Domain of unknown function (DUF3552) 6 208 6.2E-34 T 22-04-2016 IPR022711 Ribonuclease Y, N-terminal AMK43_RS07085 fcbfedd97e735a0e6154c1fd6ad6f8c8 524 Pfam PF01966 HD domain 340 432 6.9E-20 T 22-04-2016 IPR006674 HD domain AMK43_RS07085 fcbfedd97e735a0e6154c1fd6ad6f8c8 524 SUPERFAMILY SSF54791 212 299 2.66E-14 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMK43_RS07085 fcbfedd97e735a0e6154c1fd6ad6f8c8 524 Pfam PF00013 KH domain 217 259 1.5E-6 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMK43_RS07085 fcbfedd97e735a0e6154c1fd6ad6f8c8 524 Gene3D G3DSA:3.30.1370.10 222 287 1.8E-6 T 22-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 AMK43_RS07085 fcbfedd97e735a0e6154c1fd6ad6f8c8 524 Hamap MF_00335 Ribonuclease Y [rny]. 5 524 23.098 T 22-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 AMK43_RS07085 fcbfedd97e735a0e6154c1fd6ad6f8c8 524 Gene3D G3DSA:1.10.3210.10 321 499 5.6E-39 T 22-04-2016 IPR006674 HD domain AMK43_RS07085 fcbfedd97e735a0e6154c1fd6ad6f8c8 524 PANTHER PTHR12826 190 523 3.2E-122 T 22-04-2016 AMK43_RS07085 fcbfedd97e735a0e6154c1fd6ad6f8c8 524 SUPERFAMILY SSF109604 321 475 1.26E-28 T 22-04-2016 AMK43_RS07085 fcbfedd97e735a0e6154c1fd6ad6f8c8 524 SMART SM00322 211 278 4.7E-7 T 22-04-2016 IPR004087 K Homology domain GO:0003676 AMK43_RS07085 fcbfedd97e735a0e6154c1fd6ad6f8c8 524 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 8 524 3.2E-195 T 22-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 AMK43_RS07085 fcbfedd97e735a0e6154c1fd6ad6f8c8 524 TIGRFAM TIGR00277 HDIG: HDIG domain 336 412 2.9E-21 T 22-04-2016 IPR006675 HDIG domain AMK43_RS10765 2405291c91e1cc769396416728bf64a8 291 Pfam PF01261 Xylose isomerase-like TIM barrel 27 240 2.4E-28 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK43_RS10765 2405291c91e1cc769396416728bf64a8 291 PANTHER PTHR12110:SF20 2 291 3.1E-105 T 22-04-2016 AMK43_RS10765 2405291c91e1cc769396416728bf64a8 291 SUPERFAMILY SSF51658 17 281 1.44E-50 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK43_RS10765 2405291c91e1cc769396416728bf64a8 291 Gene3D G3DSA:3.20.20.150 9 281 8.2E-46 T 22-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain AMK43_RS10765 2405291c91e1cc769396416728bf64a8 291 PANTHER PTHR12110 2 291 3.1E-105 T 22-04-2016 AMK43_RS10765 2405291c91e1cc769396416728bf64a8 291 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 5 290 1.1E-121 T 22-04-2016 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961|UniPathway: UPA00263 AMK43_RS06245 1c593b7daf5c2b4fb2f5ccb61541f691 238 Pfam PF03883 Protein of unknown function (DUF328) 1 227 7.3E-60 T 22-04-2016 IPR005583 Peroxide stress protein YaaA AMK43_RS06245 1c593b7daf5c2b4fb2f5ccb61541f691 238 PANTHER PTHR30283 2 236 5.2E-49 T 22-04-2016 AMK43_RS06245 1c593b7daf5c2b4fb2f5ccb61541f691 238 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 238 23.439 T 22-04-2016 IPR005583 Peroxide stress protein YaaA AMK43_RS06245 1c593b7daf5c2b4fb2f5ccb61541f691 238 PANTHER PTHR30283:SF3 2 236 5.2E-49 T 22-04-2016 AMK43_RS02415 f47f4c704062e4db6f5c6eef0d209b8f 444 Pfam PF04055 Radical SAM superfamily 57 227 5.6E-17 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS02415 f47f4c704062e4db6f5c6eef0d209b8f 444 SMART SM00729 52 273 8.4E-40 T 22-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 AMK43_RS02415 f47f4c704062e4db6f5c6eef0d209b8f 444 PANTHER PTHR13932 42 428 2.3E-90 T 22-04-2016 AMK43_RS02415 f47f4c704062e4db6f5c6eef0d209b8f 444 Gene3D G3DSA:3.80.30.20 55 256 7.8E-29 T 22-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe AMK43_RS02415 f47f4c704062e4db6f5c6eef0d209b8f 444 PANTHER PTHR13932:SF5 42 428 2.3E-90 T 22-04-2016 AMK43_RS02415 f47f4c704062e4db6f5c6eef0d209b8f 444 SUPERFAMILY SSF102114 51 416 2.62E-64 T 22-04-2016 AMK43_RS10240 8df6dc8733ab0756116230099288bbda 109 PANTHER PTHR34382 1 109 8.9E-39 T 22-04-2016 AMK43_RS10240 8df6dc8733ab0756116230099288bbda 109 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 9 101 1.1E-34 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS10240 8df6dc8733ab0756116230099288bbda 109 PIRSF PIRSF000699 1 108 1.1E-37 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS10240 8df6dc8733ab0756116230099288bbda 109 SUPERFAMILY SSF46973 1 102 4.71E-35 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS10240 8df6dc8733ab0756116230099288bbda 109 Gene3D G3DSA:1.20.58.80 2 104 1.5E-37 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS01715 f5c0d85ba054b932366d5a87bd9d2a33 285 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 4 256 1.5E-55 T 22-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 AMK43_RS01715 f5c0d85ba054b932366d5a87bd9d2a33 285 PANTHER PTHR21039 2 277 1.4E-45 T 22-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 AMK43_RS01715 f5c0d85ba054b932366d5a87bd9d2a33 285 SUPERFAMILY SSF89550 1 41 8.76E-46 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 AMK43_RS01715 f5c0d85ba054b932366d5a87bd9d2a33 285 SUPERFAMILY SSF89550 74 285 8.76E-46 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 AMK43_RS01715 f5c0d85ba054b932366d5a87bd9d2a33 285 Gene3D G3DSA:3.20.20.140 1 281 1.6E-33 T 22-04-2016 AMK43_RS01715 f5c0d85ba054b932366d5a87bd9d2a33 285 Pfam PF02811 PHP domain 4 214 2.8E-12 T 22-04-2016 IPR004013 PHP domain GO:0003824 AMK43_RS08535 9b142c988b35e09b64cfbf6d3d14bac3 322 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 2 315 2.1E-75 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 AMK43_RS08535 9b142c988b35e09b64cfbf6d3d14bac3 322 PANTHER PTHR10443 84 317 2.2E-59 T 22-04-2016 IPR008257 Renal dipeptidase family GO:0006508|GO:0016805 MetaCyc: PWY-7533 AMK43_RS08535 9b142c988b35e09b64cfbf6d3d14bac3 322 PANTHER PTHR10443:SF12 84 317 2.2E-59 T 22-04-2016 AMK43_RS08535 9b142c988b35e09b64cfbf6d3d14bac3 322 SUPERFAMILY SSF51556 1 318 2.27E-69 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK43_RS08535 9b142c988b35e09b64cfbf6d3d14bac3 322 Gene3D G3DSA:3.20.20.140 2 318 1.2E-86 T 22-04-2016 AMK43_RS05515 e3ed86718e30500981f22235eb7539d1 363 SUPERFAMILY SSF81345 9 271 1.06E-27 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK43_RS05515 e3ed86718e30500981f22235eb7539d1 363 PANTHER PTHR30477:SF8 6 303 1.7E-105 T 22-04-2016 AMK43_RS05515 e3ed86718e30500981f22235eb7539d1 363 PANTHER PTHR30477 6 303 1.7E-105 T 22-04-2016 AMK43_RS05515 e3ed86718e30500981f22235eb7539d1 363 Pfam PF00950 ABC 3 transport family 9 273 2.1E-44 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 AMK43_RS05515 e3ed86718e30500981f22235eb7539d1 363 Gene3D G3DSA:1.10.3470.10 39 273 2.6E-8 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK43_RS07000 de3b725d18a57f191001cb86e7b89c3c 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 22-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 AMK43_RS07000 de3b725d18a57f191001cb86e7b89c3c 305 SUPERFAMILY SSF53613 1 285 1.29E-60 T 22-04-2016 IPR029056 Ribokinase-like AMK43_RS07000 de3b725d18a57f191001cb86e7b89c3c 305 PIRSF PIRSF000535 1 303 4.1E-79 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AMK43_RS07000 de3b725d18a57f191001cb86e7b89c3c 305 Pfam PF00294 pfkB family carbohydrate kinase 17 286 5.9E-53 T 22-04-2016 IPR011611 Carbohydrate kinase PfkB AMK43_RS07000 de3b725d18a57f191001cb86e7b89c3c 305 PANTHER PTHR10584 1 301 5.1E-86 T 22-04-2016 AMK43_RS07000 de3b725d18a57f191001cb86e7b89c3c 305 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 300 4.5E-91 T 22-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 AMK43_RS07000 de3b725d18a57f191001cb86e7b89c3c 305 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 300 1.7E-93 T 22-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 AMK43_RS07000 de3b725d18a57f191001cb86e7b89c3c 305 PANTHER PTHR10584:SF170 1 301 5.1E-86 T 22-04-2016 AMK43_RS07000 de3b725d18a57f191001cb86e7b89c3c 305 Gene3D G3DSA:3.40.1190.20 33 301 6.4E-71 T 22-04-2016 IPR029056 Ribokinase-like AMK43_RS03440 16c8c15801ccc4ffd0c3b2d6040f25e3 315 PANTHER PTHR11825 9 313 7.6E-69 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK43_RS03440 16c8c15801ccc4ffd0c3b2d6040f25e3 315 Pfam PF01063 Amino-transferase class IV 48 264 2.5E-32 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK43_RS03440 16c8c15801ccc4ffd0c3b2d6040f25e3 315 PANTHER PTHR11825:SF52 9 313 7.6E-69 T 22-04-2016 AMK43_RS03440 16c8c15801ccc4ffd0c3b2d6040f25e3 315 Gene3D G3DSA:3.30.470.10 10 133 5.5E-26 T 22-04-2016 AMK43_RS03440 16c8c15801ccc4ffd0c3b2d6040f25e3 315 SUPERFAMILY SSF56752 6 310 2.88E-59 T 22-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 AMK43_RS03440 16c8c15801ccc4ffd0c3b2d6040f25e3 315 Gene3D G3DSA:3.20.10.10 138 302 1.9E-34 T 22-04-2016 AMK43_RS10755 168d309fe6ae38b92d0f6a311b578140 135 SUPERFAMILY SSF47413 12 78 2.36E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS10755 168d309fe6ae38b92d0f6a311b578140 135 Gene3D G3DSA:1.10.260.40 17 105 1.0E-13 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS10755 168d309fe6ae38b92d0f6a311b578140 135 Pfam PF01381 Helix-turn-helix 21 73 8.3E-11 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK43_RS10755 168d309fe6ae38b92d0f6a311b578140 135 SMART SM00530 20 76 5.1E-10 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK43_RS01060 4e710bb4ae9649105392810f93cd3bbd 265 PANTHER PTHR21039 3 261 9.2E-49 T 22-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 AMK43_RS01060 4e710bb4ae9649105392810f93cd3bbd 265 SMART SM00481 4 85 1.2E-6 T 22-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 AMK43_RS01060 4e710bb4ae9649105392810f93cd3bbd 265 Gene3D G3DSA:3.20.20.140 3 259 1.0E-36 T 22-04-2016 AMK43_RS01060 4e710bb4ae9649105392810f93cd3bbd 265 SUPERFAMILY SSF89550 4 264 4.19E-47 T 22-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 AMK43_RS01060 4e710bb4ae9649105392810f93cd3bbd 265 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 5 232 2.4E-48 T 22-04-2016 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15|UniPathway: UPA00031 AMK43_RS01060 4e710bb4ae9649105392810f93cd3bbd 265 Pfam PF02811 PHP domain 5 192 7.0E-18 T 22-04-2016 IPR004013 PHP domain GO:0003824 AMK43_RS06205 50c6fed2c7aeb75288ed5df4b5d6b248 469 Pfam PF01554 MatE 23 183 1.5E-29 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS06205 50c6fed2c7aeb75288ed5df4b5d6b248 469 Pfam PF01554 MatE 264 416 9.3E-16 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS06205 50c6fed2c7aeb75288ed5df4b5d6b248 469 PANTHER PTHR11206:SF132 1 466 1.3E-122 T 22-04-2016 AMK43_RS06205 50c6fed2c7aeb75288ed5df4b5d6b248 469 PANTHER PTHR11206 1 466 1.3E-122 T 22-04-2016 AMK43_RS06205 50c6fed2c7aeb75288ed5df4b5d6b248 469 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 434 1.2E-53 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS06205 50c6fed2c7aeb75288ed5df4b5d6b248 469 PIRSF PIRSF006603 1 469 3.0E-75 T 22-04-2016 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 AMK43_RS02085 11095cb2f0360ec1eea8fcf62cfe3145 420 Gene3D G3DSA:3.40.50.300 1 94 7.2E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02085 11095cb2f0360ec1eea8fcf62cfe3145 420 Gene3D G3DSA:3.40.50.300 156 329 7.2E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02085 11095cb2f0360ec1eea8fcf62cfe3145 420 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 31 307 7.1E-28 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK43_RS02085 11095cb2f0360ec1eea8fcf62cfe3145 420 SUPERFAMILY SSF52540 1 138 1.12E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02085 11095cb2f0360ec1eea8fcf62cfe3145 420 SUPERFAMILY SSF52540 212 332 1.12E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02085 11095cb2f0360ec1eea8fcf62cfe3145 420 SMART SM00382 27 332 3.9E-4 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS09975 c065e57951106d6f65da358477b5f469 141 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 4 115 1.3E-8 T 22-04-2016 IPR031807 HicB-like antitoxin of toxin-antitoxin system AMK43_RS09975 c065e57951106d6f65da358477b5f469 141 SUPERFAMILY SSF143100 2 67 4.05E-13 T 22-04-2016 AMK43_RS02750 e76d2dffc34a25d3828a74df9651f11d 453 Gene3D G3DSA:3.40.190.10 346 391 1.6E-30 T 22-04-2016 AMK43_RS02750 e76d2dffc34a25d3828a74df9651f11d 453 Gene3D G3DSA:3.40.190.10 57 159 1.6E-30 T 22-04-2016 AMK43_RS02750 e76d2dffc34a25d3828a74df9651f11d 453 PANTHER PTHR30061 1 443 4.4E-55 T 22-04-2016 AMK43_RS02750 e76d2dffc34a25d3828a74df9651f11d 453 Pfam PF01547 Bacterial extracellular solute-binding protein 56 358 2.4E-35 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 AMK43_RS02750 e76d2dffc34a25d3828a74df9651f11d 453 SUPERFAMILY SSF53850 33 444 3.62E-72 T 22-04-2016 AMK43_RS02750 e76d2dffc34a25d3828a74df9651f11d 453 Gene3D G3DSA:3.40.190.10 163 345 1.0E-23 T 22-04-2016 AMK43_RS00215 67aabca95437cdfa62546e4679ea2af4 332 Gene3D G3DSA:3.40.630.30 192 305 3.9E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS00215 67aabca95437cdfa62546e4679ea2af4 332 SUPERFAMILY SSF55729 39 308 6.41E-12 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS00215 67aabca95437cdfa62546e4679ea2af4 332 Gene3D G3DSA:3.40.630.30 6 143 4.2E-6 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS00215 67aabca95437cdfa62546e4679ea2af4 332 Pfam PF00583 Acetyltransferase (GNAT) family 237 311 3.2E-7 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS10545 65a44b027cb0c10f56b9395b36d082f5 690 PANTHER PTHR12815 27 690 1.7E-80 T 22-04-2016 AMK43_RS10545 65a44b027cb0c10f56b9395b36d082f5 690 Pfam PF07244 Surface antigen variable number repeat 124 194 4.6E-8 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 AMK43_RS10545 65a44b027cb0c10f56b9395b36d082f5 690 Pfam PF07244 Surface antigen variable number repeat 31 100 4.9E-7 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 AMK43_RS10545 65a44b027cb0c10f56b9395b36d082f5 690 Pfam PF07244 Surface antigen variable number repeat 197 270 1.3E-11 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 AMK43_RS10545 65a44b027cb0c10f56b9395b36d082f5 690 Pfam PF07244 Surface antigen variable number repeat 297 359 2.6E-4 T 22-04-2016 IPR010827 Surface antigen variable number GO:0019867 AMK43_RS10545 65a44b027cb0c10f56b9395b36d082f5 690 Gene3D G3DSA:3.10.20.310 198 270 1.5E-4 T 22-04-2016 AMK43_RS10545 65a44b027cb0c10f56b9395b36d082f5 690 PANTHER PTHR12815:SF11 27 690 1.7E-80 T 22-04-2016 AMK43_RS10545 65a44b027cb0c10f56b9395b36d082f5 690 Gene3D G3DSA:2.40.160.50 364 690 4.0E-27 T 22-04-2016 AMK43_RS10545 65a44b027cb0c10f56b9395b36d082f5 690 Pfam PF01103 Surface antigen 386 690 9.9E-50 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 AMK43_RS05020 c55c01daf53fd3d694c713ba56d753ca 226 Pfam PF14559 Tetratricopeptide repeat 157 211 8.4E-6 T 22-04-2016 AMK43_RS05020 c55c01daf53fd3d694c713ba56d753ca 226 SUPERFAMILY SSF81901 97 210 9.42E-13 T 22-04-2016 AMK43_RS05020 c55c01daf53fd3d694c713ba56d753ca 226 Gene3D G3DSA:1.25.40.10 168 210 1.1E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS05020 c55c01daf53fd3d694c713ba56d753ca 226 Gene3D G3DSA:1.25.40.10 108 167 5.7E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS10805 5cd5eeb91f83f11bc75143cb3e589ab7 201 SUPERFAMILY SSF54593 1 95 4.93E-18 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK43_RS10805 5cd5eeb91f83f11bc75143cb3e589ab7 201 Gene3D G3DSA:3.10.180.10 1 71 4.4E-16 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK43_RS10805 5cd5eeb91f83f11bc75143cb3e589ab7 201 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 32 51 - T 22-04-2016 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 AMK43_RS10805 5cd5eeb91f83f11bc75143cb3e589ab7 201 PANTHER PTHR10374:SF14 2 102 1.4E-28 T 22-04-2016 AMK43_RS10805 5cd5eeb91f83f11bc75143cb3e589ab7 201 Gene3D G3DSA:3.10.180.10 90 150 1.8E-12 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK43_RS10805 5cd5eeb91f83f11bc75143cb3e589ab7 201 SUPERFAMILY SSF54593 93 153 1.29E-13 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK43_RS10805 5cd5eeb91f83f11bc75143cb3e589ab7 201 PANTHER PTHR10374 2 102 1.4E-28 T 22-04-2016 AMK43_RS06995 3a08fccd21c6f93ae3e77e543fc72c0f 645 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 287 640 3.1E-119 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AMK43_RS06995 3a08fccd21c6f93ae3e77e543fc72c0f 645 SUPERFAMILY SSF52794 178 277 1.71E-35 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS06995 3a08fccd21c6f93ae3e77e543fc72c0f 645 PANTHER PTHR30505:SF0 43 640 2.5E-250 T 22-04-2016 AMK43_RS06995 3a08fccd21c6f93ae3e77e543fc72c0f 645 SUPERFAMILY SSF55804 1 148 1.44E-42 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 AMK43_RS06995 3a08fccd21c6f93ae3e77e543fc72c0f 645 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 180 270 5.3E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS06995 3a08fccd21c6f93ae3e77e543fc72c0f 645 Pfam PF02378 Phosphotransferase system, EIIC 305 587 3.6E-15 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMK43_RS06995 3a08fccd21c6f93ae3e77e543fc72c0f 645 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 148 1.3E-38 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS06995 3a08fccd21c6f93ae3e77e543fc72c0f 645 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 179 261 4.4E-30 T 22-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 AMK43_RS06995 3a08fccd21c6f93ae3e77e543fc72c0f 645 PANTHER PTHR30505 43 640 2.5E-250 T 22-04-2016 AMK43_RS06995 3a08fccd21c6f93ae3e77e543fc72c0f 645 Gene3D G3DSA:3.40.50.2300 176 278 2.3E-39 T 22-04-2016 AMK43_RS06995 3a08fccd21c6f93ae3e77e543fc72c0f 645 Gene3D G3DSA:3.40.930.10 1 149 2.4E-49 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS06995 3a08fccd21c6f93ae3e77e543fc72c0f 645 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS06995 3a08fccd21c6f93ae3e77e543fc72c0f 645 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 8 133 3.6E-37 T 22-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS02105 7e939818993b1ba1991b7d5e6fbdcc43 323 Gene3D G3DSA:3.40.50.300 4 155 2.1E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02105 7e939818993b1ba1991b7d5e6fbdcc43 323 PANTHER PTHR11669:SF8 5 156 6.2E-21 T 22-04-2016 AMK43_RS02105 7e939818993b1ba1991b7d5e6fbdcc43 323 SUPERFAMILY SSF52540 15 169 3.19E-22 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02105 7e939818993b1ba1991b7d5e6fbdcc43 323 PANTHER PTHR11669 5 156 6.2E-21 T 22-04-2016 AMK43_RS02105 7e939818993b1ba1991b7d5e6fbdcc43 323 Pfam PF13177 DNA polymerase III, delta subunit 4 156 3.0E-36 T 22-04-2016 AMK43_RS11200 d966370e511232e362e4007de715f4d3 300 PANTHER PTHR22572:SF14 8 299 7.1E-99 T 22-04-2016 AMK43_RS11200 d966370e511232e362e4007de715f4d3 300 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 6 272 5.5E-108 T 22-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 AMK43_RS11200 d966370e511232e362e4007de715f4d3 300 PANTHER PTHR22572 8 299 7.1E-99 T 22-04-2016 AMK43_RS11200 d966370e511232e362e4007de715f4d3 300 Gene3D G3DSA:3.90.550.10 7 285 3.4E-67 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11200 d966370e511232e362e4007de715f4d3 300 SUPERFAMILY SSF53448 3 278 1.37E-63 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11200 d966370e511232e362e4007de715f4d3 300 Pfam PF00483 Nucleotidyl transferase 8 267 4.5E-33 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMK43_RS08305 60a85816bfcf24a3976dcd5cf95300c7 588 Pfam PF09706 CRISPR-associated protein (Cas_CXXC_CXXC) 237 297 1.2E-8 T 22-04-2016 IPR019121 CRISPR-associated protein, CXXC-CXXC domain AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 Pfam PF00696 Amino acid kinase family 3 229 1.5E-55 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 6.0E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 PRINTS PR00474 Glutamate 5-kinase family signature 204 224 6.0E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 PRINTS PR00474 Glutamate 5-kinase family signature 33 47 6.0E-7 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 Gene3D G3DSA:3.30.70.260 265 330 9.7E-4 T 22-04-2016 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 Pfam PF01842 ACT domain 268 329 8.7E-9 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 PANTHER PTHR21499:SF27 1 406 2.9E-150 T 22-04-2016 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 SUPERFAMILY SSF55021 328 405 2.49E-23 T 22-04-2016 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 404 2.8E-125 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 Pfam PF13840 ACT domain 338 400 3.8E-13 T 22-04-2016 IPR027795 GATS-like ACT domain AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 22-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 SUPERFAMILY SSF53633 4 241 2.62E-75 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 Gene3D G3DSA:3.40.1160.10 1 243 1.2E-71 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 PIRSF PIRSF000726 54 406 8.0E-120 T 22-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 56 403 1.7E-116 T 22-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 PANTHER PTHR21499 1 406 2.9E-150 T 22-04-2016 AMK43_RS06605 f03dbe001f62973920ae2b44146dc652 406 SUPERFAMILY SSF55021 248 325 2.85E-14 T 22-04-2016 AMK43_RS01900 414ef8a8eb27ab81a8602a6057f4850d 235 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 176 193 - T 22-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 AMK43_RS01900 414ef8a8eb27ab81a8602a6057f4850d 235 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 5 230 2.9E-80 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK43_RS01900 414ef8a8eb27ab81a8602a6057f4850d 235 SUPERFAMILY SSF64005 4 225 3.14E-76 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK43_RS01900 414ef8a8eb27ab81a8602a6057f4850d 235 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 5 231 37.034 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK43_RS01900 414ef8a8eb27ab81a8602a6057f4850d 235 Pfam PF01255 Putative undecaprenyl diphosphate synthase 12 230 1.4E-78 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK43_RS01900 414ef8a8eb27ab81a8602a6057f4850d 235 PANTHER PTHR10291 5 232 1.7E-103 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK43_RS01900 414ef8a8eb27ab81a8602a6057f4850d 235 Gene3D G3DSA:3.40.1180.10 4 233 9.9E-89 T 22-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 AMK43_RS01400 93d668ff09dc4805c646a58d7d4d54e1 292 PANTHER PTHR11089 3 286 5.1E-62 T 22-04-2016 AMK43_RS01400 93d668ff09dc4805c646a58d7d4d54e1 292 Gene3D G3DSA:3.40.50.300 19 179 3.4E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01400 93d668ff09dc4805c646a58d7d4d54e1 292 PIRSF PIRSF006230 1 292 1.9E-93 T 22-04-2016 IPR016478 GTPase, MTG1 AMK43_RS01400 93d668ff09dc4805c646a58d7d4d54e1 292 SUPERFAMILY SSF52540 9 192 3.41E-40 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01400 93d668ff09dc4805c646a58d7d4d54e1 292 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 287 2.4E-96 T 22-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis AMK43_RS01400 93d668ff09dc4805c646a58d7d4d54e1 292 Gene3D G3DSA:1.10.1580.10 182 281 1.7E-17 T 22-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain AMK43_RS01400 93d668ff09dc4805c646a58d7d4d54e1 292 Pfam PF01926 50S ribosome-binding GTPase 125 193 1.0E-14 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS08710 68eef4afd6d77281ff86572c897f8fb3 482 PANTHER PTHR10357:SF168 131 481 9.0E-154 T 22-04-2016 AMK43_RS08710 68eef4afd6d77281ff86572c897f8fb3 482 PANTHER PTHR10357:SF168 5 109 9.0E-154 T 22-04-2016 AMK43_RS08710 68eef4afd6d77281ff86572c897f8fb3 482 PIRSF PIRSF001021 1 482 2.7E-205 T 22-04-2016 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 AMK43_RS08710 68eef4afd6d77281ff86572c897f8fb3 482 Gene3D G3DSA:2.60.40.1180 396 479 6.4E-23 T 22-04-2016 IPR013780 Glycosyl hydrolase, all-beta AMK43_RS08710 68eef4afd6d77281ff86572c897f8fb3 482 SUPERFAMILY SSF51011 391 479 5.61E-22 T 22-04-2016 AMK43_RS08710 68eef4afd6d77281ff86572c897f8fb3 482 Gene3D G3DSA:3.20.20.80 2 394 1.5E-75 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS08710 68eef4afd6d77281ff86572c897f8fb3 482 SUPERFAMILY SSF51445 5 373 1.2E-100 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS08710 68eef4afd6d77281ff86572c897f8fb3 482 PANTHER PTHR10357 131 481 9.0E-154 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK43_RS08710 68eef4afd6d77281ff86572c897f8fb3 482 PANTHER PTHR10357 5 109 9.0E-154 T 22-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 AMK43_RS08710 68eef4afd6d77281ff86572c897f8fb3 482 Pfam PF00128 Alpha amylase, catalytic domain 30 374 1.7E-33 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK43_RS08710 68eef4afd6d77281ff86572c897f8fb3 482 PRINTS PR00110 Alpha-amylase signature 319 331 5.5E-5 T 22-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 AMK43_RS08710 68eef4afd6d77281ff86572c897f8fb3 482 PRINTS PR00110 Alpha-amylase signature 93 104 5.5E-5 T 22-04-2016 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: REACT_474 AMK43_RS08710 68eef4afd6d77281ff86572c897f8fb3 482 SMART SM00642 4 388 9.1E-65 T 22-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 AMK43_RS08185 a2b994f9ece4bcabe9d5d1e9ac1e7a86 265 Gene3D G3DSA:3.10.290.10 186 237 1.2E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS08185 a2b994f9ece4bcabe9d5d1e9ac1e7a86 265 SMART SM00363 185 247 0.0026 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS08185 a2b994f9ece4bcabe9d5d1e9ac1e7a86 265 PANTHER PTHR32219:SF5 1 260 8.3E-39 T 22-04-2016 AMK43_RS08185 a2b994f9ece4bcabe9d5d1e9ac1e7a86 265 PANTHER PTHR32219 1 260 8.3E-39 T 22-04-2016 AMK43_RS08185 a2b994f9ece4bcabe9d5d1e9ac1e7a86 265 SUPERFAMILY SSF55174 87 129 4.27E-17 T 22-04-2016 AMK43_RS08185 a2b994f9ece4bcabe9d5d1e9ac1e7a86 265 SUPERFAMILY SSF55174 182 252 4.27E-17 T 22-04-2016 AMK43_RS07545 7210fe72a11e1a7d7dc5214c211f8342 156 Pfam PF00156 Phosphoribosyl transferase domain 4 138 6.4E-31 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK43_RS07545 7210fe72a11e1a7d7dc5214c211f8342 156 Gene3D G3DSA:3.40.50.2020 1 154 6.6E-71 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS07545 7210fe72a11e1a7d7dc5214c211f8342 156 PANTHER PTHR22573:SF56 1 154 3.8E-71 T 22-04-2016 AMK43_RS07545 7210fe72a11e1a7d7dc5214c211f8342 156 SUPERFAMILY SSF53271 1 155 1.1E-51 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS07545 7210fe72a11e1a7d7dc5214c211f8342 156 PANTHER PTHR22573 1 154 3.8E-71 T 22-04-2016 AMK43_RS07545 7210fe72a11e1a7d7dc5214c211f8342 156 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 3 151 1.3E-63 T 22-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 AMK43_RS00480 1d07dbcd955c76006c1230a6efc85540 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 120 2.3E-46 T 22-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00480 1d07dbcd955c76006c1230a6efc85540 120 PANTHER PTHR12899 2 120 2.7E-42 T 22-04-2016 AMK43_RS00480 1d07dbcd955c76006c1230a6efc85540 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 120 6.4E-41 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00480 1d07dbcd955c76006c1230a6efc85540 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 120 28.398 T 22-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00480 1d07dbcd955c76006c1230a6efc85540 120 Gene3D G3DSA:3.30.420.100 24 120 1.2E-39 T 22-04-2016 AMK43_RS00480 1d07dbcd955c76006c1230a6efc85540 120 SUPERFAMILY SSF53137 7 118 9.53E-50 T 22-04-2016 AMK43_RS08985 1ddda61145e00f7a71087861ff160560 973 SUPERFAMILY SSF52743 294 390 3.67E-40 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK43_RS08985 1ddda61145e00f7a71087861ff160560 973 SUPERFAMILY SSF52743 87 250 3.67E-40 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK43_RS08985 1ddda61145e00f7a71087861ff160560 973 Gene3D G3DSA:2.40.128.130 652 973 2.4E-59 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS08985 1ddda61145e00f7a71087861ff160560 973 PRINTS PR00723 Subtilisin serine protease family (S8) signature 329 345 1.2E-8 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related AMK43_RS08985 1ddda61145e00f7a71087861ff160560 973 PRINTS PR00723 Subtilisin serine protease family (S8) signature 92 111 1.2E-8 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related AMK43_RS08985 1ddda61145e00f7a71087861ff160560 973 PRINTS PR00723 Subtilisin serine protease family (S8) signature 134 147 1.2E-8 T 22-04-2016 IPR015500 Peptidase S8, subtilisin-related AMK43_RS08985 1ddda61145e00f7a71087861ff160560 973 Gene3D G3DSA:3.40.50.200 61 390 5.9E-41 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK43_RS08985 1ddda61145e00f7a71087861ff160560 973 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 424 454 1.0E-7 T 22-04-2016 IPR013425 Autotransporter-associated beta strand repeat AMK43_RS08985 1ddda61145e00f7a71087861ff160560 973 SUPERFAMILY SSF103515 658 973 2.22E-53 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS08985 1ddda61145e00f7a71087861ff160560 973 SMART SM00869 696 963 5.2E-36 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS08985 1ddda61145e00f7a71087861ff160560 973 Pfam PF03797 Autotransporter beta-domain 695 957 3.5E-45 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS08985 1ddda61145e00f7a71087861ff160560 973 Pfam PF00082 Subtilase family 92 380 1.8E-28 T 22-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 AMK43_RS09490 7876faa60fc3edb15026b60ca03b4ea2 556 Gene3D G3DSA:3.10.105.10 298 523 1.7E-60 T 22-04-2016 AMK43_RS09490 7876faa60fc3edb15026b60ca03b4ea2 556 PANTHER PTHR30290 1 553 1.3E-129 T 22-04-2016 AMK43_RS09490 7876faa60fc3edb15026b60ca03b4ea2 556 SUPERFAMILY SSF53850 39 553 3.8E-124 T 22-04-2016 AMK43_RS09490 7876faa60fc3edb15026b60ca03b4ea2 556 PIRSF PIRSF002741 1 556 8.6E-121 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK43_RS09490 7876faa60fc3edb15026b60ca03b4ea2 556 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 465 3.0E-91 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK43_RS09490 7876faa60fc3edb15026b60ca03b4ea2 556 PANTHER PTHR30290:SF9 1 553 1.3E-129 T 22-04-2016 AMK43_RS09490 7876faa60fc3edb15026b60ca03b4ea2 556 Gene3D G3DSA:3.90.76.10 53 226 1.1E-38 T 22-04-2016 AMK43_RS11295 63b72419f2ed870ee40a702e20035761 322 PANTHER PTHR22916 158 312 2.8E-46 T 22-04-2016 AMK43_RS11295 63b72419f2ed870ee40a702e20035761 322 PANTHER PTHR22916 1 139 2.8E-46 T 22-04-2016 AMK43_RS11295 63b72419f2ed870ee40a702e20035761 322 PANTHER PTHR22916:SF24 158 312 2.8E-46 T 22-04-2016 AMK43_RS11295 63b72419f2ed870ee40a702e20035761 322 PANTHER PTHR22916:SF24 1 139 2.8E-46 T 22-04-2016 AMK43_RS11295 63b72419f2ed870ee40a702e20035761 322 Gene3D G3DSA:3.90.550.10 4 210 9.7E-51 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11295 63b72419f2ed870ee40a702e20035761 322 Pfam PF00535 Glycosyl transferase family 2 7 133 5.8E-30 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK43_RS11295 63b72419f2ed870ee40a702e20035761 322 SUPERFAMILY SSF53448 5 237 3.13E-44 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS05255 e16e706f780aecf85397b8a55957caa2 420 Gene3D G3DSA:3.40.50.300 198 382 9.3E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05255 e16e706f780aecf85397b8a55957caa2 420 Gene3D G3DSA:3.40.50.300 42 138 9.3E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05255 e16e706f780aecf85397b8a55957caa2 420 PANTHER PTHR40396 2 420 3.8E-97 T 22-04-2016 AMK43_RS05255 e16e706f780aecf85397b8a55957caa2 420 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 44 353 2.2E-33 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK43_RS05255 e16e706f780aecf85397b8a55957caa2 420 SUPERFAMILY SSF52540 166 376 1.18E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05255 e16e706f780aecf85397b8a55957caa2 420 SUPERFAMILY SSF52540 44 112 1.18E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11090 ded37fade643466ef724a064ef2551bb 349 SUPERFAMILY SSF53756 10 347 1.83E-47 T 22-04-2016 AMK43_RS11090 ded37fade643466ef724a064ef2551bb 349 Pfam PF00534 Glycosyl transferases group 1 171 319 5.4E-24 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 AMK43_RS11090 ded37fade643466ef724a064ef2551bb 349 PANTHER PTHR12526 21 347 7.3E-28 T 22-04-2016 AMK43_RS11090 ded37fade643466ef724a064ef2551bb 349 Gene3D G3DSA:3.40.50.2000 191 298 5.8E-7 T 22-04-2016 AMK43_RS10670 1630379abce8d5d6443b18b890add9ec 115 PANTHER PTHR33204:SF12 11 101 2.8E-41 T 22-04-2016 AMK43_RS10670 1630379abce8d5d6443b18b890add9ec 115 SUPERFAMILY SSF46785 10 106 7.8E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS10670 1630379abce8d5d6443b18b890add9ec 115 Pfam PF01638 HxlR-like helix-turn-helix 18 105 1.4E-28 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type AMK43_RS10670 1630379abce8d5d6443b18b890add9ec 115 Gene3D G3DSA:1.10.10.10 7 106 4.4E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS10670 1630379abce8d5d6443b18b890add9ec 115 PANTHER PTHR33204 11 101 2.8E-41 T 22-04-2016 AMK43_RS02190 a3bb748d13987647efa6fdcbed94246b 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 6 188 1.5E-21 T 22-04-2016 AMK43_RS02190 a3bb748d13987647efa6fdcbed94246b 220 Gene3D G3DSA:3.40.50.1000 77 204 2.5E-17 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS02190 a3bb748d13987647efa6fdcbed94246b 220 SUPERFAMILY SSF56784 1 201 5.45E-12 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS09260 05c200d0941bc80d0980aaec44962566 222 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 9 217 1.3E-17 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 AMK43_RS09260 05c200d0941bc80d0980aaec44962566 222 SUPERFAMILY SSF51726 11 208 9.03E-29 T 22-04-2016 AMK43_RS09260 05c200d0941bc80d0980aaec44962566 222 Gene3D G3DSA:3.20.20.210 116 212 9.7E-40 T 22-04-2016 AMK43_RS09260 05c200d0941bc80d0980aaec44962566 222 Gene3D G3DSA:3.20.20.210 5 84 9.7E-40 T 22-04-2016 AMK43_RS09260 05c200d0941bc80d0980aaec44962566 222 PANTHER PTHR30519 8 216 1.2E-25 T 22-04-2016 AMK43_RS07400 8e08d160b2d09eb0340a81de1e44d0f2 400 PANTHER PTHR37316 8 395 1.8E-14 T 22-04-2016 AMK43_RS07400 8e08d160b2d09eb0340a81de1e44d0f2 400 SUPERFAMILY SSF53756 27 391 6.75E-14 T 22-04-2016 AMK43_RS07400 8e08d160b2d09eb0340a81de1e44d0f2 400 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 36 390 2.8E-51 T 22-04-2016 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 AMK43_RS06735 50a742c1c9bddfc2a0b632893bdfee7a 80 PANTHER PTHR34654 2 79 2.5E-14 T 22-04-2016 AMK43_RS06735 50a742c1c9bddfc2a0b632893bdfee7a 80 Pfam PF13083 KH domain 7 77 5.2E-18 T 22-04-2016 AMK43_RS06735 50a742c1c9bddfc2a0b632893bdfee7a 80 SUPERFAMILY SSF54814 13 63 1.18E-5 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMK43_RS06735 50a742c1c9bddfc2a0b632893bdfee7a 80 Gene3D G3DSA:3.30.300.120 4 75 1.5E-12 T 22-04-2016 AMK43_RS06415 5e77f4553e6391cccb6590596fd6a421 317 SUPERFAMILY SSF53822 58 313 2.75E-54 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK43_RS06415 5e77f4553e6391cccb6590596fd6a421 317 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK43_RS06415 5e77f4553e6391cccb6590596fd6a421 317 Gene3D G3DSA:1.10.260.40 1 52 1.0E-24 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS06415 5e77f4553e6391cccb6590596fd6a421 317 Gene3D G3DSA:3.40.50.2300 176 305 2.2E-31 T 22-04-2016 AMK43_RS06415 5e77f4553e6391cccb6590596fd6a421 317 SMART SM00354 1 70 1.8E-32 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK43_RS06415 5e77f4553e6391cccb6590596fd6a421 317 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 2 12 2.6E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK43_RS06415 5e77f4553e6391cccb6590596fd6a421 317 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 2.6E-5 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK43_RS06415 5e77f4553e6391cccb6590596fd6a421 317 SUPERFAMILY SSF47413 2 57 4.45E-18 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS06415 5e77f4553e6391cccb6590596fd6a421 317 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 59 256 9.5E-24 T 22-04-2016 IPR001761 Periplasmic binding protein/LacI sugar binding domain AMK43_RS06415 5e77f4553e6391cccb6590596fd6a421 317 PANTHER PTHR30146 1 307 2.2E-87 T 22-04-2016 AMK43_RS06415 5e77f4553e6391cccb6590596fd6a421 317 Gene3D G3DSA:3.40.50.2300 53 175 4.6E-38 T 22-04-2016 AMK43_RS06415 5e77f4553e6391cccb6590596fd6a421 317 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 2.4E-21 T 22-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 AMK43_RS01375 148087fa8ca3f4e6eb983cc75dcf0750 112 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 87 9.0E-18 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 AMK43_RS01375 148087fa8ca3f4e6eb983cc75dcf0750 112 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 94 9.8E-23 T 22-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 AMK43_RS01375 148087fa8ca3f4e6eb983cc75dcf0750 112 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 10 92 2.0E-12 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 AMK43_RS01375 148087fa8ca3f4e6eb983cc75dcf0750 112 SMART SM01103 3 87 4.9E-25 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 AMK43_RS01375 148087fa8ca3f4e6eb983cc75dcf0750 112 PANTHER PTHR31846 1 95 1.4E-22 T 22-04-2016 AMK43_RS01375 148087fa8ca3f4e6eb983cc75dcf0750 112 Gene3D G3DSA:3.30.110.60 1 95 5.3E-26 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 AMK43_RS01375 148087fa8ca3f4e6eb983cc75dcf0750 112 SUPERFAMILY SSF75471 1 95 7.72E-25 T 22-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 AMK43_RS00535 d4dd6090b41c09bdc44890331828f163 264 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 250 2.3E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00535 d4dd6090b41c09bdc44890331828f163 264 PANTHER PTHR30043:SF1 6 264 2.7E-57 T 22-04-2016 AMK43_RS00535 d4dd6090b41c09bdc44890331828f163 264 SUPERFAMILY SSF161098 68 257 5.76E-26 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00535 d4dd6090b41c09bdc44890331828f163 264 PANTHER PTHR30043 6 264 2.7E-57 T 22-04-2016 AMK43_RS00535 d4dd6090b41c09bdc44890331828f163 264 Gene3D G3DSA:1.10.3720.10 65 262 7.6E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS11165 b4755eb03da7c576cd3f3c9445e8e76e 270 SUPERFAMILY SSF53756 67 266 2.09E-29 T 22-04-2016 AMK43_RS11165 b4755eb03da7c576cd3f3c9445e8e76e 270 Gene3D G3DSA:3.40.50.2000 61 210 4.8E-14 T 22-04-2016 AMK43_RS11165 b4755eb03da7c576cd3f3c9445e8e76e 270 PANTHER PTHR12526 76 268 1.4E-20 T 22-04-2016 AMK43_RS11165 b4755eb03da7c576cd3f3c9445e8e76e 270 Pfam PF00534 Glycosyl transferases group 1 83 249 3.3E-17 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 AMK43_RS09265 bae619840e1da4a94b6d462bb859730e 113 Pfam PF02635 DsrE/DsrF-like family 37 100 8.2E-7 T 22-04-2016 IPR003787 Sulphur relay, DsrE/F-like protein AMK43_RS09265 bae619840e1da4a94b6d462bb859730e 113 TIGRFAM TIGR03527 selenium_YedF: selenium metabolism protein YedF 3 112 1.6E-35 T 22-04-2016 IPR019870 Selenium metabolism protein YedF AMK43_RS09265 bae619840e1da4a94b6d462bb859730e 113 Gene3D G3DSA:3.40.1260.10 40 97 1.7E-15 T 22-04-2016 IPR027396 DsrEFH-like AMK43_RS09265 bae619840e1da4a94b6d462bb859730e 113 PANTHER PTHR33279:SF3 7 111 3.6E-18 T 22-04-2016 AMK43_RS09265 bae619840e1da4a94b6d462bb859730e 113 PANTHER PTHR33279 7 111 3.6E-18 T 22-04-2016 AMK43_RS09265 bae619840e1da4a94b6d462bb859730e 113 SUPERFAMILY SSF75169 17 104 1.65E-14 T 22-04-2016 IPR027396 DsrEFH-like AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 Pfam PF00106 short chain dehydrogenase 6 199 1.0E-59 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 22-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 6.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 6.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 6.9E-24 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 PANTHER PTHR24322 10 138 1.2E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 PANTHER PTHR24322 154 189 1.2E-52 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.2E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.2E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 3.2E-8 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 192 4.4E-4 T 22-04-2016 AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 PANTHER PTHR24322:SF330 10 138 1.2E-52 T 22-04-2016 AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 PANTHER PTHR24322:SF330 154 189 1.2E-52 T 22-04-2016 AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 SUPERFAMILY SSF51735 3 232 1.8E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS08680 d6aa8c87906f51626434a9da97f5fc62 247 Gene3D G3DSA:3.40.50.720 3 232 5.8E-69 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS00195 6e635bd10964a5dc8432efd7c11e47fe 289 Pfam PF00849 RNA pseudouridylate synthase 80 230 7.2E-23 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS00195 6e635bd10964a5dc8432efd7c11e47fe 289 SUPERFAMILY SSF55120 65 288 5.76E-56 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS00195 6e635bd10964a5dc8432efd7c11e47fe 289 PANTHER PTHR11079:SF73 3 289 1.1E-71 T 22-04-2016 AMK43_RS00195 6e635bd10964a5dc8432efd7c11e47fe 289 PANTHER PTHR11079 3 289 1.1E-71 T 22-04-2016 AMK43_RS00195 6e635bd10964a5dc8432efd7c11e47fe 289 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 24 288 2.0E-59 T 22-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS04920 f4a39fecec3df4297408aae0c5fb518a 558 SUPERFAMILY SSF64182 52 436 7.06E-102 T 22-04-2016 AMK43_RS04920 f4a39fecec3df4297408aae0c5fb518a 558 PANTHER PTHR30255:SF2 2 538 5.6E-174 T 22-04-2016 AMK43_RS04920 f4a39fecec3df4297408aae0c5fb518a 558 PANTHER PTHR30255 2 538 5.6E-174 T 22-04-2016 AMK43_RS04920 f4a39fecec3df4297408aae0c5fb518a 558 Pfam PF02272 DHHA1 domain 371 433 2.5E-11 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 AMK43_RS04920 f4a39fecec3df4297408aae0c5fb518a 558 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 24 546 1.3E-144 T 22-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 AMK43_RS04920 f4a39fecec3df4297408aae0c5fb518a 558 Pfam PF01368 DHH family 77 207 6.1E-11 T 22-04-2016 IPR001667 DDH domain AMK43_RS06460 5b696c2afbdf0db6ce5272a7ee4960e7 403 Pfam PF12704 MacB-like periplasmic core domain 21 245 6.0E-34 T 22-04-2016 IPR025857 MacB-like periplasmic core domain AMK43_RS06460 5b696c2afbdf0db6ce5272a7ee4960e7 403 Pfam PF02687 FtsX-like permease family 284 396 6.6E-19 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMK43_RS06460 5b696c2afbdf0db6ce5272a7ee4960e7 403 PANTHER PTHR30572 1 403 1.6E-90 T 22-04-2016 AMK43_RS08725 acefa751a3a25680976f4f1f93d35a26 373 Gene3D G3DSA:3.40.710.10 31 259 3.5E-60 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS08725 acefa751a3a25680976f4f1f93d35a26 373 PANTHER PTHR21581:SF3 34 369 1.9E-53 T 22-04-2016 AMK43_RS08725 acefa751a3a25680976f4f1f93d35a26 373 Gene3D G3DSA:2.60.410.10 272 356 1.4E-6 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS08725 acefa751a3a25680976f4f1f93d35a26 373 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 251 2.2E-41 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMK43_RS08725 acefa751a3a25680976f4f1f93d35a26 373 SUPERFAMILY SSF69189 272 358 3.14E-8 T 22-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS08725 acefa751a3a25680976f4f1f93d35a26 373 SUPERFAMILY SSF56601 31 259 3.07E-48 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS08725 acefa751a3a25680976f4f1f93d35a26 373 PANTHER PTHR21581 34 369 1.9E-53 T 22-04-2016 AMK43_RS08725 acefa751a3a25680976f4f1f93d35a26 373 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 272 357 2.3E-6 T 22-04-2016 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS08725 acefa751a3a25680976f4f1f93d35a26 373 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 49 60 9.2E-10 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK43_RS08725 acefa751a3a25680976f4f1f93d35a26 373 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 130 143 9.2E-10 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK43_RS08725 acefa751a3a25680976f4f1f93d35a26 373 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 102 119 9.2E-10 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK43_RS09295 9a06fc68d3f5b3fbe23ef133d1db3c90 271 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 194 266 7.8E-16 T 22-04-2016 AMK43_RS09295 9a06fc68d3f5b3fbe23ef133d1db3c90 271 SUPERFAMILY SSF55166 143 268 3.06E-16 T 22-04-2016 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain AMK43_RS04275 e07b3c9c49f5c354be9f480ec47d24d2 476 SUPERFAMILY SSF50156 250 331 2.8E-8 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS04275 e07b3c9c49f5c354be9f480ec47d24d2 476 PANTHER PTHR22939 26 460 3.5E-102 T 22-04-2016 AMK43_RS04275 e07b3c9c49f5c354be9f480ec47d24d2 476 Gene3D G3DSA:2.40.10.10 106 219 3.2E-22 T 22-04-2016 AMK43_RS04275 e07b3c9c49f5c354be9f480ec47d24d2 476 Gene3D G3DSA:2.30.42.10 251 334 3.8E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS04275 e07b3c9c49f5c354be9f480ec47d24d2 476 Pfam PF13180 PDZ domain 228 328 3.4E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS04275 e07b3c9c49f5c354be9f480ec47d24d2 476 PRINTS PR00834 HtrA/DegQ protease family signature 267 279 1.2E-9 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS04275 e07b3c9c49f5c354be9f480ec47d24d2 476 PRINTS PR00834 HtrA/DegQ protease family signature 55 67 1.2E-9 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS04275 e07b3c9c49f5c354be9f480ec47d24d2 476 PRINTS PR00834 HtrA/DegQ protease family signature 162 179 1.2E-9 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS04275 e07b3c9c49f5c354be9f480ec47d24d2 476 PRINTS PR00834 HtrA/DegQ protease family signature 83 103 1.2E-9 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS04275 e07b3c9c49f5c354be9f480ec47d24d2 476 Pfam PF13365 Trypsin-like peptidase domain 53 190 1.1E-21 T 22-04-2016 AMK43_RS04275 e07b3c9c49f5c354be9f480ec47d24d2 476 PANTHER PTHR22939:SF83 26 460 3.5E-102 T 22-04-2016 IPR015724 Serine endopeptidase DegP2 AMK43_RS04275 e07b3c9c49f5c354be9f480ec47d24d2 476 SUPERFAMILY SSF50494 23 220 2.9E-39 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK43_RS04275 e07b3c9c49f5c354be9f480ec47d24d2 476 Gene3D G3DSA:2.40.10.10 23 105 1.3E-9 T 22-04-2016 AMK43_RS09480 d7d52834deeb7e3fabb016d3944455f2 267 Gene3D G3DSA:1.10.3720.10 62 261 5.3E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09480 d7d52834deeb7e3fabb016d3944455f2 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 258 4.5E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09480 d7d52834deeb7e3fabb016d3944455f2 267 SUPERFAMILY SSF161098 64 254 6.28E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09480 d7d52834deeb7e3fabb016d3944455f2 267 PANTHER PTHR30465 3 264 1.6E-66 T 22-04-2016 AMK43_RS09480 d7d52834deeb7e3fabb016d3944455f2 267 PANTHER PTHR30465:SF10 3 264 1.6E-66 T 22-04-2016 AMK43_RS04815 03941916c3bd59968c421ae4e318b35a 122 PANTHER PTHR33204 1 120 6.5E-39 T 22-04-2016 AMK43_RS04815 03941916c3bd59968c421ae4e318b35a 122 SUPERFAMILY SSF46785 8 113 5.65E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS04815 03941916c3bd59968c421ae4e318b35a 122 Pfam PF01638 HxlR-like helix-turn-helix 21 107 2.2E-34 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type AMK43_RS04815 03941916c3bd59968c421ae4e318b35a 122 Gene3D G3DSA:1.10.10.10 6 112 6.8E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS10855 d5f8d903be42ef94a6d70db0f4cae933 370 PANTHER PTHR30404 151 365 1.4E-63 T 22-04-2016 AMK43_RS10855 d5f8d903be42ef94a6d70db0f4cae933 370 PANTHER PTHR30404:SF0 151 365 1.4E-63 T 22-04-2016 AMK43_RS10855 d5f8d903be42ef94a6d70db0f4cae933 370 Gene3D G3DSA:3.40.630.40 160 254 1.0E-56 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK43_RS10855 d5f8d903be42ef94a6d70db0f4cae933 370 Gene3D G3DSA:3.40.630.40 293 368 1.0E-56 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK43_RS10855 d5f8d903be42ef94a6d70db0f4cae933 370 SMART SM00646 219 365 4.4E-30 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK43_RS10855 d5f8d903be42ef94a6d70db0f4cae933 370 SUPERFAMILY SSF53187 160 253 2.17E-49 T 22-04-2016 AMK43_RS10855 d5f8d903be42ef94a6d70db0f4cae933 370 SUPERFAMILY SSF53187 292 368 2.17E-49 T 22-04-2016 AMK43_RS10855 d5f8d903be42ef94a6d70db0f4cae933 370 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 162 365 2.6E-51 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK43_RS03405 564595866e94bdfcb7d8d22412612770 279 PANTHER PTHR14194 1 279 2.8E-59 T 22-04-2016 AMK43_RS03405 564595866e94bdfcb7d8d22412612770 279 SUPERFAMILY SSF51735 3 237 4.37E-50 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS03405 564595866e94bdfcb7d8d22412612770 279 Gene3D G3DSA:3.40.50.720 3 212 5.0E-38 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS03405 564595866e94bdfcb7d8d22412612770 279 PANTHER PTHR14194:SF73 1 279 2.8E-59 T 22-04-2016 AMK43_RS03405 564595866e94bdfcb7d8d22412612770 279 Pfam PF05368 NmrA-like family 4 217 8.9E-28 T 22-04-2016 IPR008030 NmrA-like domain AMK43_RS03860 c0123277c2e94b1d51c63e917c834fdf 553 Gene3D G3DSA:1.10.8.60 167 244 9.9E-24 T 22-04-2016 AMK43_RS03860 c0123277c2e94b1d51c63e917c834fdf 553 SUPERFAMILY SSF52540 32 223 1.2E-60 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03860 c0123277c2e94b1d51c63e917c834fdf 553 Pfam PF13177 DNA polymerase III, delta subunit 19 179 2.4E-46 T 22-04-2016 AMK43_RS03860 c0123277c2e94b1d51c63e917c834fdf 553 PANTHER PTHR11669 5 291 9.8E-139 T 22-04-2016 AMK43_RS03860 c0123277c2e94b1d51c63e917c834fdf 553 SMART SM00382 36 180 1.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS03860 c0123277c2e94b1d51c63e917c834fdf 553 Gene3D G3DSA:3.40.50.300 5 166 6.0E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03860 c0123277c2e94b1d51c63e917c834fdf 553 PANTHER PTHR11669:SF0 5 291 9.8E-139 T 22-04-2016 AMK43_RS03860 c0123277c2e94b1d51c63e917c834fdf 553 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 4 301 1.7E-121 T 22-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 AMK43_RS08070 455183033d92334ca2e224c7d2783695 188 PANTHER PTHR10204:SF42 3 129 7.5E-39 T 22-04-2016 AMK43_RS08070 455183033d92334ca2e224c7d2783695 188 PANTHER PTHR10204 3 129 7.5E-39 T 22-04-2016 AMK43_RS08070 455183033d92334ca2e224c7d2783695 188 Pfam PF02525 Flavodoxin-like fold 3 183 9.2E-34 T 22-04-2016 IPR003680 Flavodoxin-like fold AMK43_RS08070 455183033d92334ca2e224c7d2783695 188 Gene3D G3DSA:3.40.50.360 4 188 1.1E-42 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS08070 455183033d92334ca2e224c7d2783695 188 SUPERFAMILY SSF52218 4 188 3.64E-42 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS08650 8f5535da48e58efab84b90035c801c50 85 Gene3D G3DSA:3.40.1620.10 6 50 1.6E-5 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMK43_RS08650 8f5535da48e58efab84b90035c801c50 85 PANTHER PTHR33713 1 85 3.5E-18 T 22-04-2016 AMK43_RS08650 8f5535da48e58efab84b90035c801c50 85 SUPERFAMILY SSF143120 1 80 4.84E-21 T 22-04-2016 AMK43_RS08650 8f5535da48e58efab84b90035c801c50 85 PANTHER PTHR33713:SF6 1 85 3.5E-18 T 22-04-2016 AMK43_RS08650 8f5535da48e58efab84b90035c801c50 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 54 5.0E-7 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMK43_RS08650 8f5535da48e58efab84b90035c801c50 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 64 4.9E-16 T 22-04-2016 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM AMK43_RS01955 1fdf8bd59043be78383351a5aa074867 435 SUPERFAMILY SSF111283 101 435 1.09E-49 T 22-04-2016 AMK43_RS01955 1fdf8bd59043be78383351a5aa074867 435 Pfam PF01523 Putative modulator of DNA gyrase 114 289 3.9E-23 T 22-04-2016 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK43_RS01955 1fdf8bd59043be78383351a5aa074867 435 PANTHER PTHR30624 101 435 1.1E-49 T 22-04-2016 AMK43_RS07555 447aeb43b84c4e999f702acebb6ae25e 482 Pfam PF03577 Peptidase family C69 26 404 3.9E-111 T 22-04-2016 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 AMK43_RS07555 447aeb43b84c4e999f702acebb6ae25e 482 PANTHER PTHR12994:SF17 7 438 4.8E-49 T 22-04-2016 AMK43_RS07555 447aeb43b84c4e999f702acebb6ae25e 482 PANTHER PTHR12994 7 438 4.8E-49 T 22-04-2016 AMK43_RS10520 57fc04ae86f7f7e6b93fa0072dc2d2aa 159 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 3 149 7.8E-59 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMK43_RS10520 57fc04ae86f7f7e6b93fa0072dc2d2aa 159 Gene3D G3DSA:3.30.1360.80 1 158 5.3E-56 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMK43_RS10520 57fc04ae86f7f7e6b93fa0072dc2d2aa 159 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 155 31.774 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMK43_RS10520 57fc04ae86f7f7e6b93fa0072dc2d2aa 159 PIRSF PIRSF006160 1 158 8.9E-53 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMK43_RS10520 57fc04ae86f7f7e6b93fa0072dc2d2aa 159 PANTHER PTHR35799 3 159 1.2E-25 T 22-04-2016 AMK43_RS10520 57fc04ae86f7f7e6b93fa0072dc2d2aa 159 SUPERFAMILY SSF63411 4 159 6.13E-48 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMK43_RS10520 57fc04ae86f7f7e6b93fa0072dc2d2aa 159 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 148 9.0E-46 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMK43_RS10520 57fc04ae86f7f7e6b93fa0072dc2d2aa 159 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 117 136 4.7E-14 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMK43_RS10520 57fc04ae86f7f7e6b93fa0072dc2d2aa 159 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 48 66 4.7E-14 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMK43_RS10520 57fc04ae86f7f7e6b93fa0072dc2d2aa 159 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 75 93 4.7E-14 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMK43_RS10520 57fc04ae86f7f7e6b93fa0072dc2d2aa 159 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 4.7E-14 T 22-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 AMK43_RS01225 57d9abfd3fc0ddf6636be338db3718bd 360 Gene3D G3DSA:2.40.160.20 44 187 1.2E-4 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK43_RS01225 57d9abfd3fc0ddf6636be338db3718bd 360 PRINTS PR01021 OMPA domain signature 274 289 3.3E-6 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS01225 57d9abfd3fc0ddf6636be338db3718bd 360 PRINTS PR01021 OMPA domain signature 289 305 3.3E-6 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS01225 57d9abfd3fc0ddf6636be338db3718bd 360 Pfam PF00691 OmpA family 253 340 2.3E-13 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS01225 57d9abfd3fc0ddf6636be338db3718bd 360 Gene3D G3DSA:3.30.1330.60 243 346 1.6E-23 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS01225 57d9abfd3fc0ddf6636be338db3718bd 360 PANTHER PTHR30128 251 350 1.5E-21 T 22-04-2016 AMK43_RS01225 57d9abfd3fc0ddf6636be338db3718bd 360 SUPERFAMILY SSF103088 243 346 3.92E-23 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS01885 1c07d0b261277ebf59e4330cfe336882 577 Pfam PF00664 ABC transporter transmembrane region 29 271 1.6E-19 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS01885 1c07d0b261277ebf59e4330cfe336882 577 SMART SM00382 356 550 5.8E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS01885 1c07d0b261277ebf59e4330cfe336882 577 Gene3D G3DSA:3.40.50.300 331 562 5.3E-79 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01885 1c07d0b261277ebf59e4330cfe336882 577 Pfam PF00005 ABC transporter 347 496 2.5E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS01885 1c07d0b261277ebf59e4330cfe336882 577 PANTHER PTHR24222 1 562 3.7E-155 T 22-04-2016 AMK43_RS01885 1c07d0b261277ebf59e4330cfe336882 577 SUPERFAMILY SSF52540 322 564 1.55E-88 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01885 1c07d0b261277ebf59e4330cfe336882 577 PANTHER PTHR24222:SF29 1 562 3.7E-155 T 22-04-2016 AMK43_RS01885 1c07d0b261277ebf59e4330cfe336882 577 Gene3D G3DSA:1.20.1560.10 20 315 7.8E-33 T 22-04-2016 AMK43_RS01885 1c07d0b261277ebf59e4330cfe336882 577 SUPERFAMILY SSF90123 11 316 7.32E-43 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS01885 1c07d0b261277ebf59e4330cfe336882 577 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS05450 43ec9e3b5c002e2aa4bebe5ede6c768a 166 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 160 9.8E-54 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMK43_RS05450 43ec9e3b5c002e2aa4bebe5ede6c768a 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.3E-25 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMK43_RS05450 43ec9e3b5c002e2aa4bebe5ede6c768a 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.3E-25 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMK43_RS05450 43ec9e3b5c002e2aa4bebe5ede6c768a 166 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 88 104 1.3E-25 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMK43_RS05450 43ec9e3b5c002e2aa4bebe5ede6c768a 166 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 61 2.3E-16 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK43_RS05450 43ec9e3b5c002e2aa4bebe5ede6c768a 166 Pfam PF01467 Cytidylyltransferase-like 6 137 2.0E-19 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK43_RS05450 43ec9e3b5c002e2aa4bebe5ede6c768a 166 Gene3D G3DSA:3.40.50.620 1 161 2.1E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS05450 43ec9e3b5c002e2aa4bebe5ede6c768a 166 SUPERFAMILY SSF52374 2 160 5.33E-35 T 22-04-2016 AMK43_RS05450 43ec9e3b5c002e2aa4bebe5ede6c768a 166 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 162 32.537 T 22-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 AMK43_RS05450 43ec9e3b5c002e2aa4bebe5ede6c768a 166 PANTHER PTHR21342 1 165 8.3E-64 T 22-04-2016 AMK43_RS05450 43ec9e3b5c002e2aa4bebe5ede6c768a 166 PANTHER PTHR21342:SF1 1 165 8.3E-64 T 22-04-2016 AMK43_RS04970 a21183b2e0ed03625e1d7c7d857fbe44 184 PANTHER PTHR21666 64 177 1.1E-31 T 22-04-2016 AMK43_RS04970 a21183b2e0ed03625e1d7c7d857fbe44 184 Gene3D G3DSA:3.90.1720.10 62 179 1.3E-43 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK43_RS04970 a21183b2e0ed03625e1d7c7d857fbe44 184 SUPERFAMILY SSF54001 61 181 1.57E-40 T 22-04-2016 AMK43_RS04970 a21183b2e0ed03625e1d7c7d857fbe44 184 Pfam PF00877 NlpC/P60 family 75 177 5.3E-30 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK43_RS01240 2749c1ec579273565d36ce3867ad3869 121 PANTHER PTHR38446:SF1 2 121 4.2E-32 T 22-04-2016 AMK43_RS01240 2749c1ec579273565d36ce3867ad3869 121 Pfam PF06993 Protein of unknown function (DUF1304) 11 118 5.0E-38 T 22-04-2016 IPR009732 Protein of unknown function DUF1304 AMK43_RS01240 2749c1ec579273565d36ce3867ad3869 121 PANTHER PTHR38446 2 121 4.2E-32 T 22-04-2016 AMK43_RS04895 54b271afd4822dceb24a52827fa24b8b 161 PANTHER PTHR33867:SF1 1 160 5.1E-33 T 22-04-2016 AMK43_RS04895 54b271afd4822dceb24a52827fa24b8b 161 Gene3D G3DSA:3.30.300.70 2 79 2.1E-18 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal AMK43_RS04895 54b271afd4822dceb24a52827fa24b8b 161 Gene3D G3DSA:2.30.30.180 86 147 3.2E-14 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal AMK43_RS04895 54b271afd4822dceb24a52827fa24b8b 161 Pfam PF02576 Putative ribosome maturation factor RimP 13 147 9.9E-38 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 AMK43_RS04895 54b271afd4822dceb24a52827fa24b8b 161 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 2 151 22.598 T 22-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 AMK43_RS04895 54b271afd4822dceb24a52827fa24b8b 161 SUPERFAMILY SSF74942 83 150 1.96E-13 T 22-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal AMK43_RS04895 54b271afd4822dceb24a52827fa24b8b 161 SUPERFAMILY SSF75420 2 82 2.35E-18 T 22-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal AMK43_RS04895 54b271afd4822dceb24a52827fa24b8b 161 PANTHER PTHR33867 1 160 5.1E-33 T 22-04-2016 AMK43_RS11195 b1e5421d1dcbfa1e6cd9a3851ebad558 431 PANTHER PTHR30576 9 430 8.0E-90 T 22-04-2016 AMK43_RS11195 b1e5421d1dcbfa1e6cd9a3851ebad558 431 PANTHER PTHR30576:SF0 9 430 8.0E-90 T 22-04-2016 AMK43_RS11195 b1e5421d1dcbfa1e6cd9a3851ebad558 431 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 14 430 1.9E-103 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMK43_RS11195 b1e5421d1dcbfa1e6cd9a3851ebad558 431 Pfam PF02397 Bacterial sugar transferase 244 426 9.6E-55 T 22-04-2016 IPR003362 Bacterial sugar transferase AMK43_RS04135 05a3b279ad650cc9f0f3b0661fc7b949 87 Hamap MF_00580 10 kDa chaperonin [groS]. 2 87 20.54 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK43_RS04135 05a3b279ad650cc9f0f3b0661fc7b949 87 PRINTS PR00297 10kDa chaperonin signature 26 47 3.2E-19 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK43_RS04135 05a3b279ad650cc9f0f3b0661fc7b949 87 PRINTS PR00297 10kDa chaperonin signature 52 64 3.2E-19 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK43_RS04135 05a3b279ad650cc9f0f3b0661fc7b949 87 PRINTS PR00297 10kDa chaperonin signature 3 18 3.2E-19 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK43_RS04135 05a3b279ad650cc9f0f3b0661fc7b949 87 PRINTS PR00297 10kDa chaperonin signature 73 86 3.2E-19 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK43_RS04135 05a3b279ad650cc9f0f3b0661fc7b949 87 SUPERFAMILY SSF50129 2 86 2.51E-25 T 22-04-2016 IPR011032 GroES-like AMK43_RS04135 05a3b279ad650cc9f0f3b0661fc7b949 87 PANTHER PTHR10772:SF0 1 85 1.6E-26 T 22-04-2016 AMK43_RS04135 05a3b279ad650cc9f0f3b0661fc7b949 87 Gene3D G3DSA:2.30.33.40 3 86 5.8E-25 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK43_RS04135 05a3b279ad650cc9f0f3b0661fc7b949 87 SMART SM00883 2 86 2.0E-37 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK43_RS04135 05a3b279ad650cc9f0f3b0661fc7b949 87 PANTHER PTHR10772 1 85 1.6E-26 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK43_RS04135 05a3b279ad650cc9f0f3b0661fc7b949 87 Pfam PF00166 Chaperonin 10 Kd subunit 3 85 1.2E-24 T 22-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 AMK43_RS10735 098d3b093eb4b694d9e1f7035c473a98 190 PANTHER PTHR21047:SF2 11 184 3.1E-74 T 22-04-2016 AMK43_RS10735 098d3b093eb4b694d9e1f7035c473a98 190 Gene3D G3DSA:2.60.120.10 5 183 1.5E-79 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK43_RS10735 098d3b093eb4b694d9e1f7035c473a98 190 SUPERFAMILY SSF51182 3 184 9.79E-73 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK43_RS10735 098d3b093eb4b694d9e1f7035c473a98 190 PANTHER PTHR21047 11 184 3.1E-74 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMK43_RS10735 098d3b093eb4b694d9e1f7035c473a98 190 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 30 180 8.0E-59 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMK43_RS10735 098d3b093eb4b694d9e1f7035c473a98 190 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 8 182 7.2E-75 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMK43_RS10735 098d3b093eb4b694d9e1f7035c473a98 190 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 6 182 7.1E-77 T 22-04-2016 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 4.8E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 4.8E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 4.8E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 308 319 4.8E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 4.8E-31 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 9.1E-47 T 22-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 Gene3D G3DSA:3.40.50.1370 3 145 6.1E-57 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 330 81.714 T 22-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 Gene3D G3DSA:3.40.50.1370 146 316 1.2E-69 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 327 6.6E-56 T 22-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 PANTHER PTHR11405 1 275 4.7E-175 T 22-04-2016 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 PANTHER PTHR11405 295 329 4.7E-175 T 22-04-2016 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 7.1E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 294 317 7.1E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 7.1E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 274 7.1E-27 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 PANTHER PTHR11405:SF44 1 275 4.7E-175 T 22-04-2016 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 PANTHER PTHR11405:SF44 295 329 4.7E-175 T 22-04-2016 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 SUPERFAMILY SSF53671 4 329 8.9E-103 T 22-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 AMK43_RS05970 5b7b03ac0e7be189be678a9be0f0abdb 330 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 329 5.5E-128 T 22-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 AMK43_RS11180 168a009e994df1579c883fbc32f7da6c 304 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 295 1.0E-36 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS11180 168a009e994df1579c883fbc32f7da6c 304 PANTHER PTHR10366 5 304 7.3E-53 T 22-04-2016 AMK43_RS11180 168a009e994df1579c883fbc32f7da6c 304 Gene3D G3DSA:3.90.25.10 202 300 9.7E-10 T 22-04-2016 AMK43_RS11180 168a009e994df1579c883fbc32f7da6c 304 SUPERFAMILY SSF51735 1 303 2.2E-57 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS11180 168a009e994df1579c883fbc32f7da6c 304 Gene3D G3DSA:3.40.50.720 4 201 6.0E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS09210 bb844ecdea9481d9bacf9713ff017aa9 341 Gene3D G3DSA:3.40.50.2000 1 149 4.5E-31 T 22-04-2016 AMK43_RS09210 bb844ecdea9481d9bacf9713ff017aa9 341 Gene3D G3DSA:3.40.50.2000 170 336 8.4E-30 T 22-04-2016 AMK43_RS09210 bb844ecdea9481d9bacf9713ff017aa9 341 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 73 288 5.9E-23 T 22-04-2016 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 AMK43_RS09210 bb844ecdea9481d9bacf9713ff017aa9 341 PANTHER PTHR30160:SF1 1 335 1.4E-52 T 22-04-2016 AMK43_RS09210 bb844ecdea9481d9bacf9713ff017aa9 341 SUPERFAMILY SSF53756 1 335 1.32E-59 T 22-04-2016 AMK43_RS09210 bb844ecdea9481d9bacf9713ff017aa9 341 PANTHER PTHR30160 1 335 1.4E-52 T 22-04-2016 AMK43_RS02710 4e5c937e5ff8600d66fcd64e36323cd1 344 SUPERFAMILY SSF47005 44 88 4.45E-10 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK43_RS02710 4e5c937e5ff8600d66fcd64e36323cd1 344 PANTHER PTHR23151 87 92 1.2E-108 T 22-04-2016 AMK43_RS02710 4e5c937e5ff8600d66fcd64e36323cd1 344 PANTHER PTHR23151 3 63 1.2E-108 T 22-04-2016 AMK43_RS02710 4e5c937e5ff8600d66fcd64e36323cd1 344 PANTHER PTHR23151 114 343 1.2E-108 T 22-04-2016 AMK43_RS02710 4e5c937e5ff8600d66fcd64e36323cd1 344 Gene3D G3DSA:3.30.559.10 108 343 5.9E-81 T 22-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain AMK43_RS02710 4e5c937e5ff8600d66fcd64e36323cd1 344 Gene3D G3DSA:4.10.320.10 3 41 4.4E-16 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK43_RS02710 4e5c937e5ff8600d66fcd64e36323cd1 344 SUPERFAMILY SSF52777 112 344 3.78E-81 T 22-04-2016 AMK43_RS02710 4e5c937e5ff8600d66fcd64e36323cd1 344 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 114 343 1.1E-79 T 22-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 AMK43_RS02710 4e5c937e5ff8600d66fcd64e36323cd1 344 Gene3D G3DSA:4.10.320.10 46 93 1.4E-14 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK43_RS02710 4e5c937e5ff8600d66fcd64e36323cd1 344 SUPERFAMILY SSF47005 3 42 9.29E-11 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK43_RS02710 4e5c937e5ff8600d66fcd64e36323cd1 344 Pfam PF02817 e3 binding domain 49 84 5.5E-10 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK43_RS02710 4e5c937e5ff8600d66fcd64e36323cd1 344 Pfam PF02817 e3 binding domain 7 41 1.5E-13 T 22-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 AMK43_RS05165 328bbf0918e6deccdd1289e6c922211f 403 PANTHER PTHR32145:SF20 2 403 1.3E-171 T 22-04-2016 AMK43_RS05165 328bbf0918e6deccdd1289e6c922211f 403 SUPERFAMILY SSF52218 258 401 1.92E-22 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS05165 328bbf0918e6deccdd1289e6c922211f 403 Pfam PF00753 Metallo-beta-lactamase superfamily 36 179 1.1E-7 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS05165 328bbf0918e6deccdd1289e6c922211f 403 PANTHER PTHR32145 2 403 1.3E-171 T 22-04-2016 AMK43_RS05165 328bbf0918e6deccdd1289e6c922211f 403 Gene3D G3DSA:3.40.50.360 253 400 1.8E-35 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS05165 328bbf0918e6deccdd1289e6c922211f 403 Gene3D G3DSA:3.60.15.10 2 249 2.6E-82 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS05165 328bbf0918e6deccdd1289e6c922211f 403 PIRSF PIRSF005243 1 403 2.0E-116 T 22-04-2016 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 AMK43_RS05165 328bbf0918e6deccdd1289e6c922211f 403 SMART SM00849 35 228 3.4E-19 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS05165 328bbf0918e6deccdd1289e6c922211f 403 SUPERFAMILY SSF56281 5 285 1.0E-46 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS05165 328bbf0918e6deccdd1289e6c922211f 403 Pfam PF00258 Flavodoxin 260 365 1.1E-5 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMK43_RS06215 918dde55b58a8465e27d0e3e113402ea 269 PANTHER PTHR39962 1 269 1.6E-75 T 22-04-2016 AMK43_RS06215 918dde55b58a8465e27d0e3e113402ea 269 PANTHER PTHR39962:SF1 1 269 1.6E-75 T 22-04-2016 AMK43_RS06215 918dde55b58a8465e27d0e3e113402ea 269 Pfam PF06230 Protein of unknown function (DUF1009) 56 262 9.5E-70 T 22-04-2016 IPR010415 Protein of unknown function DUF1009 AMK43_RS00900 b0051c61e765a9595b814513d660fa72 243 TIGRFAM TIGR03915 SAM_7_link_chp: probable DNA metabolism protein 4 241 3.0E-68 T 22-04-2016 IPR023875 DNA metabolism protein, putative AMK43_RS00900 b0051c61e765a9595b814513d660fa72 243 Pfam PF13566 Domain of unknown function (DUF4130 83 241 6.1E-43 T 22-04-2016 IPR025404 Domain of unknown function DUF4130 AMK43_RS00170 3a2a627600063e3def820078646652ff 338 SUPERFAMILY SSF46589 14 100 6.28E-19 T 22-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 AMK43_RS00170 3a2a627600063e3def820078646652ff 338 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 39 338 1.1E-100 T 22-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMK43_RS00170 3a2a627600063e3def820078646652ff 338 PANTHER PTHR11538 93 338 1.8E-99 T 22-04-2016 AMK43_RS00170 3a2a627600063e3def820078646652ff 338 Gene3D G3DSA:3.30.930.10 10 338 8.3E-123 T 22-04-2016 AMK43_RS00170 3a2a627600063e3def820078646652ff 338 SUPERFAMILY SSF55681 93 338 8.46E-77 T 22-04-2016 AMK43_RS00170 3a2a627600063e3def820078646652ff 338 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 1.1E-19 T 22-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 AMK43_RS00170 3a2a627600063e3def820078646652ff 338 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 338 45.252 T 22-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 AMK43_RS00170 3a2a627600063e3def820078646652ff 338 Pfam PF01409 tRNA synthetases class II core domain (F) 93 338 5.9E-99 T 22-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 AMK43_RS00555 cef5afdd3569a768cfed1e8fed7d8e11 210 SUPERFAMILY SSF46785 85 157 1.54E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS00555 cef5afdd3569a768cfed1e8fed7d8e11 210 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 164 2.2E-38 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMK43_RS00555 cef5afdd3569a768cfed1e8fed7d8e11 210 Gene3D G3DSA:1.10.10.10 1 78 8.3E-10 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS00555 cef5afdd3569a768cfed1e8fed7d8e11 210 PANTHER PTHR34298 1 210 2.2E-32 T 22-04-2016 AMK43_RS00555 cef5afdd3569a768cfed1e8fed7d8e11 210 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 7 173 9.2E-28 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMK43_RS00555 cef5afdd3569a768cfed1e8fed7d8e11 210 PIRSF PIRSF019345 1 203 1.1E-41 T 22-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 AMK43_RS00555 cef5afdd3569a768cfed1e8fed7d8e11 210 SUPERFAMILY SSF46785 4 78 1.9E-8 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS00555 cef5afdd3569a768cfed1e8fed7d8e11 210 Gene3D G3DSA:1.10.10.10 85 157 4.3E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS01980 08aea7456bab2e07a479722abca93596 203 PANTHER PTHR23029 6 200 1.6E-48 T 22-04-2016 AMK43_RS01980 08aea7456bab2e07a479722abca93596 203 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 195 3.6E-49 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK43_RS01980 08aea7456bab2e07a479722abca93596 203 PANTHER PTHR23029:SF33 6 200 1.6E-48 T 22-04-2016 AMK43_RS01980 08aea7456bab2e07a479722abca93596 203 SMART SM00855 6 162 1.8E-16 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK43_RS01980 08aea7456bab2e07a479722abca93596 203 Gene3D G3DSA:3.40.50.1240 3 201 1.5E-54 T 22-04-2016 IPR029033 Histidine phosphatase superfamily AMK43_RS01980 08aea7456bab2e07a479722abca93596 203 SUPERFAMILY SSF53254 5 201 2.02E-50 T 22-04-2016 IPR029033 Histidine phosphatase superfamily AMK43_RS01980 08aea7456bab2e07a479722abca93596 203 PIRSF PIRSF000709 2 200 5.8E-19 T 22-04-2016 AMK43_RS10000 c4debf5c94b1322245f788b9842f8063 318 PANTHER PTHR18964:SF114 10 261 5.9E-49 T 22-04-2016 AMK43_RS10000 c4debf5c94b1322245f788b9842f8063 318 Pfam PF01238 Phosphomannose isomerase type I 7 115 9.5E-19 T 22-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 AMK43_RS10000 c4debf5c94b1322245f788b9842f8063 318 Gene3D G3DSA:2.60.120.10 234 318 1.7E-16 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK43_RS10000 c4debf5c94b1322245f788b9842f8063 318 SUPERFAMILY SSF51182 1 316 8.9E-78 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK43_RS10000 c4debf5c94b1322245f788b9842f8063 318 Gene3D G3DSA:2.60.120.10 1 223 1.3E-68 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK43_RS10000 c4debf5c94b1322245f788b9842f8063 318 PIRSF PIRSF036894 2 318 1.3E-95 T 22-04-2016 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 AMK43_RS10000 c4debf5c94b1322245f788b9842f8063 318 PANTHER PTHR18964 10 261 5.9E-49 T 22-04-2016 AMK43_RS01230 48595002d37752975a404f6e70f29634 209 TIGRFAM TIGR01351 adk: adenylate kinase 2 207 1.0E-80 T 22-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK43_RS01230 48595002d37752975a404f6e70f29634 209 PANTHER PTHR23359 1 209 1.4E-96 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK43_RS01230 48595002d37752975a404f6e70f29634 209 PRINTS PR00094 Adenylate kinase signature 155 170 2.6E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK43_RS01230 48595002d37752975a404f6e70f29634 209 PRINTS PR00094 Adenylate kinase signature 4 17 2.6E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK43_RS01230 48595002d37752975a404f6e70f29634 209 PRINTS PR00094 Adenylate kinase signature 32 46 2.6E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK43_RS01230 48595002d37752975a404f6e70f29634 209 PRINTS PR00094 Adenylate kinase signature 81 97 2.6E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK43_RS01230 48595002d37752975a404f6e70f29634 209 PRINTS PR00094 Adenylate kinase signature 172 186 2.6E-36 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK43_RS01230 48595002d37752975a404f6e70f29634 209 Gene3D G3DSA:3.40.50.300 1 206 2.7E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01230 48595002d37752975a404f6e70f29634 209 SUPERFAMILY SSF52540 1 208 8.55E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01230 48595002d37752975a404f6e70f29634 209 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK43_RS01230 48595002d37752975a404f6e70f29634 209 Pfam PF00406 Adenylate kinase 5 185 1.4E-59 T 22-04-2016 AMK43_RS01230 48595002d37752975a404f6e70f29634 209 Hamap MF_00235 Adenylate kinase [adk]. 1 208 50.669 T 22-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 AMK43_RS11030 632ca1a4ed1a156ab34bd4859d17a848 69 SUPERFAMILY SSF47413 7 65 6.22E-11 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS11030 632ca1a4ed1a156ab34bd4859d17a848 69 Gene3D G3DSA:1.10.260.40 13 66 6.6E-12 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS11030 632ca1a4ed1a156ab34bd4859d17a848 69 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 8 67 1.6E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK43_RS04660 723c786d89dfe98c6b15f55b7b97ed15 227 PANTHER PTHR30450 1 227 6.4E-102 T 22-04-2016 AMK43_RS04660 723c786d89dfe98c6b15f55b7b97ed15 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 224 2.4E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS04660 723c786d89dfe98c6b15f55b7b97ed15 227 Gene3D G3DSA:1.10.3720.10 13 222 1.5E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS04660 723c786d89dfe98c6b15f55b7b97ed15 227 PANTHER PTHR30450:SF1 1 227 6.4E-102 T 22-04-2016 AMK43_RS04660 723c786d89dfe98c6b15f55b7b97ed15 227 SUPERFAMILY SSF161098 14 211 2.09E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS04645 cd739514f3439eacbe4397ffb1de7d10 217 SUPERFAMILY SSF161098 11 206 2.09E-39 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS04645 cd739514f3439eacbe4397ffb1de7d10 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 213 1.3E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS04645 cd739514f3439eacbe4397ffb1de7d10 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 109 6.6E-22 T 22-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 AMK43_RS04645 cd739514f3439eacbe4397ffb1de7d10 217 PANTHER PTHR30614 4 217 2.7E-70 T 22-04-2016 AMK43_RS04645 cd739514f3439eacbe4397ffb1de7d10 217 Gene3D G3DSA:1.10.3720.10 10 212 2.7E-46 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS03805 178c39c3644843539da41d04366630e8 192 PANTHER PTHR30055:SF47 3 190 4.4E-18 T 22-04-2016 AMK43_RS03805 178c39c3644843539da41d04366630e8 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 54 6.0E-13 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK43_RS03805 178c39c3644843539da41d04366630e8 192 Pfam PF16925 Bacterial transcriptional repressor C-terminal 80 187 4.1E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK43_RS03805 178c39c3644843539da41d04366630e8 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 6.1E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK43_RS03805 178c39c3644843539da41d04366630e8 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 6.1E-7 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK43_RS03805 178c39c3644843539da41d04366630e8 192 Gene3D G3DSA:1.10.357.10 7 189 4.8E-31 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK43_RS03805 178c39c3644843539da41d04366630e8 192 SUPERFAMILY SSF48498 81 189 5.26E-10 T 22-04-2016 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal AMK43_RS03805 178c39c3644843539da41d04366630e8 192 PANTHER PTHR30055 3 190 4.4E-18 T 22-04-2016 AMK43_RS03805 178c39c3644843539da41d04366630e8 192 SUPERFAMILY SSF46689 3 68 3.28E-16 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS10410 66fb861adb17c0b8714dc45868dcdb4a 248 Pfam PF01446 Replication protein 91 169 1.6E-7 T 22-04-2016 IPR000989 Replication protein GO:0003677|GO:0005727|GO:0006260 AMK43_RS08685 ca58fbc261b7dc0547f3d9f47db6c338 587 Gene3D G3DSA:3.40.50.920 461 585 1.8E-23 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK43_RS08685 ca58fbc261b7dc0547f3d9f47db6c338 587 Gene3D G3DSA:3.40.50.970 262 443 2.1E-39 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS08685 ca58fbc261b7dc0547f3d9f47db6c338 587 Pfam PF02779 Transketolase, pyrimidine binding domain 283 439 3.0E-18 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK43_RS08685 ca58fbc261b7dc0547f3d9f47db6c338 587 SMART SM00861 280 445 1.0E-26 T 22-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain AMK43_RS08685 ca58fbc261b7dc0547f3d9f47db6c338 587 PANTHER PTHR11624 16 586 0.0 T 22-04-2016 IPR033247 Transketolase family AMK43_RS08685 ca58fbc261b7dc0547f3d9f47db6c338 587 PANTHER PTHR11624:SF62 16 586 0.0 T 22-04-2016 AMK43_RS08685 ca58fbc261b7dc0547f3d9f47db6c338 587 SUPERFAMILY SSF52922 456 586 4.32E-23 T 22-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 AMK43_RS08685 ca58fbc261b7dc0547f3d9f47db6c338 587 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 3 195 4.5E-79 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK43_RS08685 ca58fbc261b7dc0547f3d9f47db6c338 587 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 199 242 8.9E-8 T 22-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 AMK43_RS08685 ca58fbc261b7dc0547f3d9f47db6c338 587 Gene3D G3DSA:3.40.50.970 18 261 7.3E-62 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS08685 ca58fbc261b7dc0547f3d9f47db6c338 587 Pfam PF02780 Transketolase, C-terminal domain 462 577 1.3E-16 T 22-04-2016 IPR033248 Transketolase, C-terminal domain AMK43_RS08685 ca58fbc261b7dc0547f3d9f47db6c338 587 SUPERFAMILY SSF52518 3 343 1.43E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS08820 f8ef164f1640224e04b72ba494fc2a5a 184 Gene3D G3DSA:3.40.50.150 1 182 1.6E-58 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS08820 f8ef164f1640224e04b72ba494fc2a5a 184 PANTHER PTHR18895 1 183 2.0E-41 T 22-04-2016 AMK43_RS08820 f8ef164f1640224e04b72ba494fc2a5a 184 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK43_RS08820 f8ef164f1640224e04b72ba494fc2a5a 184 PIRSF PIRSF004553 1 183 1.9E-55 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK43_RS08820 f8ef164f1640224e04b72ba494fc2a5a 184 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 181 1.4E-48 T 22-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 AMK43_RS08820 f8ef164f1640224e04b72ba494fc2a5a 184 PANTHER PTHR18895:SF60 1 183 2.0E-41 T 22-04-2016 AMK43_RS08820 f8ef164f1640224e04b72ba494fc2a5a 184 SUPERFAMILY SSF53335 1 180 6.97E-48 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS08820 f8ef164f1640224e04b72ba494fc2a5a 184 Pfam PF03602 Conserved hypothetical protein 95 1 181 2.1E-57 T 22-04-2016 AMK43_RS09290 efe36c1d05809606123523eb4a6732d5 259 Pfam PF01909 Nucleotidyltransferase domain 5 84 2.0E-6 T 22-04-2016 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 AMK43_RS09290 efe36c1d05809606123523eb4a6732d5 259 Pfam PF13228 Domain of unknown function (DUF4037) 118 207 9.7E-13 T 22-04-2016 IPR025117 Domain of unknown function DUF4037 AMK43_RS09290 efe36c1d05809606123523eb4a6732d5 259 Gene3D G3DSA:3.30.460.10 9 93 1.1E-9 T 22-04-2016 AMK43_RS09290 efe36c1d05809606123523eb4a6732d5 259 SUPERFAMILY SSF81301 1 133 8.36E-25 T 22-04-2016 AMK43_RS04945 faffec8ae0f38c373b5cb159d58e2d15 423 Gene3D G3DSA:3.30.1330.90 10 77 1.9E-20 T 22-04-2016 IPR029009 Allosteric substrate binding domain AMK43_RS04945 faffec8ae0f38c373b5cb159d58e2d15 423 Gene3D G3DSA:3.30.1330.90 78 129 1.0E-5 T 22-04-2016 IPR029009 Allosteric substrate binding domain AMK43_RS04945 faffec8ae0f38c373b5cb159d58e2d15 423 PANTHER PTHR30182 1 413 6.4E-158 T 22-04-2016 AMK43_RS04945 faffec8ae0f38c373b5cb159d58e2d15 423 Pfam PF03313 Serine dehydratase alpha chain 167 413 1.2E-83 T 22-04-2016 IPR005130 Serine dehydratase-like, alpha subunit AMK43_RS04945 faffec8ae0f38c373b5cb159d58e2d15 423 SUPERFAMILY SSF143548 16 128 1.83E-21 T 22-04-2016 IPR029009 Allosteric substrate binding domain AMK43_RS04945 faffec8ae0f38c373b5cb159d58e2d15 423 PANTHER PTHR30182:SF1 1 413 6.4E-158 T 22-04-2016 AMK43_RS04945 faffec8ae0f38c373b5cb159d58e2d15 423 Pfam PF03315 Serine dehydratase beta chain 78 126 1.4E-4 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 AMK43_RS04945 faffec8ae0f38c373b5cb159d58e2d15 423 Pfam PF03315 Serine dehydratase beta chain 3 78 1.2E-18 T 22-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 AMK43_RS04945 faffec8ae0f38c373b5cb159d58e2d15 423 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 79 414 2.9E-110 T 22-04-2016 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 AMK43_RS01215 5ed934e52bc1aef3a0ebe6c30afaffc0 289 PANTHER PTHR30075 1 289 8.2E-229 T 22-04-2016 AMK43_RS01215 5ed934e52bc1aef3a0ebe6c30afaffc0 289 Gene3D G3DSA:1.20.58.180 205 286 3.3E-37 T 22-04-2016 AMK43_RS01215 5ed934e52bc1aef3a0ebe6c30afaffc0 289 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 57.472 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01215 5ed934e52bc1aef3a0ebe6c30afaffc0 289 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 279 1.4E-146 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01215 5ed934e52bc1aef3a0ebe6c30afaffc0 289 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 289 2.0E-147 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01215 5ed934e52bc1aef3a0ebe6c30afaffc0 289 Gene3D G3DSA:3.30.930.10 1 203 1.6E-98 T 22-04-2016 AMK43_RS01215 5ed934e52bc1aef3a0ebe6c30afaffc0 289 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 2.2E-64 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01215 5ed934e52bc1aef3a0ebe6c30afaffc0 289 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 2.2E-64 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01215 5ed934e52bc1aef3a0ebe6c30afaffc0 289 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 2.2E-64 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01215 5ed934e52bc1aef3a0ebe6c30afaffc0 289 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 2.2E-64 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01215 5ed934e52bc1aef3a0ebe6c30afaffc0 289 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 2.2E-64 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01215 5ed934e52bc1aef3a0ebe6c30afaffc0 289 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 2.2E-64 T 22-04-2016 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 AMK43_RS01215 5ed934e52bc1aef3a0ebe6c30afaffc0 289 SUPERFAMILY SSF55681 1 280 7.21E-128 T 22-04-2016 AMK43_RS03305 57592018a67288220879f660b110b013 295 Pfam PF00589 Phage integrase family 114 280 2.2E-40 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK43_RS03305 57592018a67288220879f660b110b013 295 Gene3D G3DSA:1.10.150.130 13 99 2.8E-20 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal AMK43_RS03305 57592018a67288220879f660b110b013 295 Gene3D G3DSA:1.10.443.10 114 287 5.3E-48 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK43_RS03305 57592018a67288220879f660b110b013 295 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 14 89 5.6E-14 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMK43_RS03305 57592018a67288220879f660b110b013 295 PANTHER PTHR30349:SF5 12 290 1.5E-84 T 22-04-2016 AMK43_RS03305 57592018a67288220879f660b110b013 295 PANTHER PTHR30349 12 290 1.5E-84 T 22-04-2016 AMK43_RS03305 57592018a67288220879f660b110b013 295 SUPERFAMILY SSF56349 13 286 5.0E-54 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK43_RS03305 57592018a67288220879f660b110b013 295 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 294 24.674 T 22-04-2016 IPR023009 Tyrosine recombinase XerC/XerD AMK43_RS08715 f45b79650593f0585a624032d50923f1 247 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 4 233 1.6E-73 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AMK43_RS08715 f45b79650593f0585a624032d50923f1 247 PANTHER PTHR21485:SF4 1 245 9.2E-109 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AMK43_RS08715 f45b79650593f0585a624032d50923f1 247 PANTHER PTHR21485 1 245 9.2E-109 T 22-04-2016 AMK43_RS08715 f45b79650593f0585a624032d50923f1 247 Gene3D G3DSA:3.90.550.10 1 242 7.9E-75 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS08715 f45b79650593f0585a624032d50923f1 247 SUPERFAMILY SSF53448 1 241 2.48E-56 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS08715 f45b79650593f0585a624032d50923f1 247 Hamap MF_00057 3-deoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 241 38.623 T 22-04-2016 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AMK43_RS08715 f45b79650593f0585a624032d50923f1 247 Pfam PF02348 Cytidylyltransferase 5 215 7.3E-55 T 22-04-2016 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|UniPathway: UPA00030|UniPathway: UPA00358 AMK43_RS04445 515aeb8ffb913c494fb9bcfa1ccbc7f7 323 Pfam PF04392 ABC transporter substrate binding protein 40 320 1.4E-75 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein AMK43_RS04445 515aeb8ffb913c494fb9bcfa1ccbc7f7 323 Gene3D G3DSA:3.40.50.2300 159 289 9.7E-45 T 22-04-2016 AMK43_RS04445 515aeb8ffb913c494fb9bcfa1ccbc7f7 323 SUPERFAMILY SSF53822 37 197 1.24E-8 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK43_RS04445 515aeb8ffb913c494fb9bcfa1ccbc7f7 323 PANTHER PTHR35271 36 323 1.4E-53 T 22-04-2016 AMK43_RS04445 515aeb8ffb913c494fb9bcfa1ccbc7f7 323 Gene3D G3DSA:3.40.50.2300 38 158 1.2E-36 T 22-04-2016 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 Pfam PF14559 Tetratricopeptide repeat 120 175 1.9E-7 T 22-04-2016 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 PANTHER PTHR23083 16 208 4.9E-37 T 22-04-2016 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 PANTHER PTHR23083 243 302 4.9E-37 T 22-04-2016 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 SUPERFAMILY SSF48452 9 204 1.48E-23 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 SMART SM00028 37 70 260.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 SMART SM00028 138 171 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 SMART SM00028 243 276 16.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 SMART SM00028 175 208 14.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 SMART SM00028 3 36 74.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 SMART SM00028 277 310 55.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 SMART SM00028 71 104 13.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 SMART SM00028 106 137 1.7 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 SUPERFAMILY SSF48452 243 316 4.09E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 SUPERFAMILY SSF48452 170 210 4.09E-12 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 Pfam PF13181 Tetratricopeptide repeat 38 64 0.11 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 Pfam PF13181 Tetratricopeptide repeat 72 102 0.0045 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 Pfam PF13181 Tetratricopeptide repeat 245 276 0.11 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 Pfam PF13181 Tetratricopeptide repeat 177 202 0.14 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 Gene3D G3DSA:1.25.40.10 122 227 2.0E-17 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 Gene3D G3DSA:1.25.40.10 5 121 4.1E-24 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS11420 33506bc60399b77bb282a8bff4fe2435 333 Gene3D G3DSA:1.25.40.10 245 306 3.6E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS11000 4d3c581c6cd02e1b8a7e5cdab075fdd5 569 Pfam PF00664 ABC transporter transmembrane region 17 281 2.8E-20 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS11000 4d3c581c6cd02e1b8a7e5cdab075fdd5 569 SUPERFAMILY SSF52540 324 567 1.33E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11000 4d3c581c6cd02e1b8a7e5cdab075fdd5 569 SMART SM00382 356 542 2.5E-13 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS11000 4d3c581c6cd02e1b8a7e5cdab075fdd5 569 Gene3D G3DSA:3.40.50.300 331 560 1.8E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11000 4d3c581c6cd02e1b8a7e5cdab075fdd5 569 Gene3D G3DSA:1.20.1560.10 2 312 5.0E-44 T 22-04-2016 AMK43_RS11000 4d3c581c6cd02e1b8a7e5cdab075fdd5 569 PANTHER PTHR24221 1 566 3.2E-156 T 22-04-2016 AMK43_RS11000 4d3c581c6cd02e1b8a7e5cdab075fdd5 569 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS11000 4d3c581c6cd02e1b8a7e5cdab075fdd5 569 SUPERFAMILY SSF90123 6 315 6.41E-46 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS11000 4d3c581c6cd02e1b8a7e5cdab075fdd5 569 Pfam PF00005 ABC transporter 348 496 1.6E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 Gene3D G3DSA:3.40.50.300 58 275 2.9E-44 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 SUPERFAMILY SSF52540 70 286 1.67E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 Gene3D G3DSA:3.30.230.10 282 452 1.2E-31 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 TIGRFAM TIGR00416 sms: DNA repair protein RadA 10 439 4.2E-156 T 22-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 PANTHER PTHR32472 10 454 4.7E-166 T 22-04-2016 AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 SUPERFAMILY SSF54211 301 453 6.07E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 SUPERFAMILY SSF54211 253 267 6.07E-31 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 349 452 3.8E-9 T 22-04-2016 IPR008269 Peptidase S16, Lon C-terminal GO:0004176|GO:0004252|GO:0006508 AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 PRINTS PR01874 DNA repair protein radA signature 81 109 8.4E-85 T 22-04-2016 AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 PRINTS PR01874 DNA repair protein radA signature 172 196 8.4E-85 T 22-04-2016 AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 PRINTS PR01874 DNA repair protein radA signature 211 239 8.4E-85 T 22-04-2016 AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 PRINTS PR01874 DNA repair protein radA signature 320 343 8.4E-85 T 22-04-2016 AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 PRINTS PR01874 DNA repair protein radA signature 246 272 8.4E-85 T 22-04-2016 AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 PRINTS PR01874 DNA repair protein radA signature 15 39 8.4E-85 T 22-04-2016 AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 PRINTS PR01874 DNA repair protein radA signature 122 139 8.4E-85 T 22-04-2016 AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 Pfam PF13481 AAA domain 82 220 1.3E-14 T 22-04-2016 AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 PANTHER PTHR32472:SF10 10 454 4.7E-166 T 22-04-2016 AMK43_RS05455 b0dee4b597a9df7182e7cafd9aa2a85b 455 SMART SM00382 89 242 3.4E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS10050 a0a8bfdaab07ff3d6df5f8684f0a5745 79 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 78 3.8E-19 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS10050 a0a8bfdaab07ff3d6df5f8684f0a5745 79 PRINTS PR01249 Ribosomal protein L31 signature 59 77 1.6E-17 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS10050 a0a8bfdaab07ff3d6df5f8684f0a5745 79 PRINTS PR01249 Ribosomal protein L31 signature 44 59 1.6E-17 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS10050 a0a8bfdaab07ff3d6df5f8684f0a5745 79 PRINTS PR01249 Ribosomal protein L31 signature 2 19 1.6E-17 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS10050 a0a8bfdaab07ff3d6df5f8684f0a5745 79 PANTHER PTHR33280:SF2 1 79 9.5E-28 T 22-04-2016 AMK43_RS10050 a0a8bfdaab07ff3d6df5f8684f0a5745 79 PANTHER PTHR33280 1 79 9.5E-28 T 22-04-2016 AMK43_RS10050 a0a8bfdaab07ff3d6df5f8684f0a5745 79 SUPERFAMILY SSF143800 1 78 7.85E-22 T 22-04-2016 AMK43_RS10050 a0a8bfdaab07ff3d6df5f8684f0a5745 79 Pfam PF01197 Ribosomal protein L31 1 78 7.3E-28 T 22-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS04285 307b2a299dafeddaa2a0046010ddb304 228 PANTHER PTHR24220 7 224 7.1E-95 T 22-04-2016 AMK43_RS04285 307b2a299dafeddaa2a0046010ddb304 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS04285 307b2a299dafeddaa2a0046010ddb304 228 SUPERFAMILY SSF52540 5 224 1.2E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04285 307b2a299dafeddaa2a0046010ddb304 228 Gene3D G3DSA:3.40.50.300 3 224 3.1E-63 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04285 307b2a299dafeddaa2a0046010ddb304 228 PANTHER PTHR24220:SF86 7 224 7.1E-95 T 22-04-2016 AMK43_RS04285 307b2a299dafeddaa2a0046010ddb304 228 SMART SM00382 34 223 1.9E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS04285 307b2a299dafeddaa2a0046010ddb304 228 Pfam PF00005 ABC transporter 25 174 1.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS01210 85074b3dbcd6aef523398b8f80b13e90 155 Pfam PF01252 Signal peptidase (SPase) II 6 145 2.0E-31 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK43_RS01210 85074b3dbcd6aef523398b8f80b13e90 155 PANTHER PTHR33695:SF1 1 145 1.3E-31 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK43_RS01210 85074b3dbcd6aef523398b8f80b13e90 155 PANTHER PTHR33695 1 145 1.3E-31 T 22-04-2016 AMK43_RS01210 85074b3dbcd6aef523398b8f80b13e90 155 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 47 55 1.5E-12 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK43_RS01210 85074b3dbcd6aef523398b8f80b13e90 155 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 92 107 1.5E-12 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK43_RS01210 85074b3dbcd6aef523398b8f80b13e90 155 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 126 142 1.5E-12 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK43_RS01210 85074b3dbcd6aef523398b8f80b13e90 155 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 151 14.132 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK43_RS01210 85074b3dbcd6aef523398b8f80b13e90 155 ProSitePatterns PS00855 Signal peptidases II signature. 95 107 - T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK43_RS01210 85074b3dbcd6aef523398b8f80b13e90 155 TIGRFAM TIGR00077 lspA: signal peptidase II 3 152 3.6E-25 T 22-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 Gene3D G3DSA:2.40.50.140 504 583 3.9E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 Gene3D G3DSA:2.40.50.140 158 244 8.3E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 PRINTS PR00681 Ribosomal protein S1 signature 259 275 9.4E-21 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 PRINTS PR00681 Ribosomal protein S1 signature 440 459 9.4E-21 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 PRINTS PR00681 Ribosomal protein S1 signature 171 189 9.4E-21 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 PRINTS PR00681 Ribosomal protein S1 signature 308 328 9.4E-21 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 PRINTS PR00681 Ribosomal protein S1 signature 362 383 9.4E-21 T 22-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 SUPERFAMILY SSF50249 425 511 1.05E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 Gene3D G3DSA:2.40.50.140 427 503 5.7E-23 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 Gene3D G3DSA:2.40.50.140 256 336 9.3E-25 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 SMART SM00316 509 580 6.7E-16 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 SMART SM00316 169 239 6.9E-24 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 SMART SM00316 425 494 4.6E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 SMART SM00316 19 79 4.2E-7 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 SMART SM00316 339 410 4.5E-17 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 SMART SM00316 91 154 0.035 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 SMART SM00316 254 324 1.0E-21 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 Pfam PF00575 S1 RNA binding domain 339 410 3.0E-11 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 Pfam PF00575 S1 RNA binding domain 509 580 3.8E-9 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 Pfam PF00575 S1 RNA binding domain 169 239 3.1E-16 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 Pfam PF00575 S1 RNA binding domain 19 75 2.9E-5 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 Pfam PF00575 S1 RNA binding domain 423 494 2.8E-19 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 Pfam PF00575 S1 RNA binding domain 253 324 1.8E-15 T 22-04-2016 IPR003029 S1 domain GO:0003676 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 SUPERFAMILY SSF50249 492 596 1.64E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 SUPERFAMILY SSF50249 90 164 3.12E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 PANTHER PTHR10724:SF6 3 488 1.9E-109 T 22-04-2016 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 SUPERFAMILY SSF50249 150 251 1.91E-22 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 PANTHER PTHR10724 3 488 1.9E-109 T 22-04-2016 AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 SUPERFAMILY SSF50249 6 72 2.73E-7 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 SUPERFAMILY SSF50249 319 416 3.66E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 SUPERFAMILY SSF50249 237 344 2.57E-24 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 Gene3D G3DSA:2.40.50.140 90 153 9.1E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 Gene3D G3DSA:2.40.50.140 337 411 6.4E-21 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10135 b678b4e6df4aa4588f211ed20cbbede6 600 Gene3D G3DSA:2.40.50.140 17 72 4.4E-6 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS05865 fcc3fc5810175ea34f0dec3cfb7e999a 163 SUPERFAMILY SSF55729 27 155 1.27E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS05865 fcc3fc5810175ea34f0dec3cfb7e999a 163 Gene3D G3DSA:3.40.630.30 27 156 1.0E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS05865 fcc3fc5810175ea34f0dec3cfb7e999a 163 Pfam PF13302 Acetyltransferase (GNAT) domain 20 148 3.5E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS07320 f8c158cd92a576a3b3aad88754fc08fa 593 SUPERFAMILY SSF47781 508 592 7.63E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK43_RS07320 f8c158cd92a576a3b3aad88754fc08fa 593 Gene3D G3DSA:4.10.860.10 184 241 5.3E-12 T 22-04-2016 IPR001943 UVR domain GO:0005515 AMK43_RS07320 f8c158cd92a576a3b3aad88754fc08fa 593 Hamap MF_00203 UvrABC system protein C [uvrC]. 3 592 26.441 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AMK43_RS07320 f8c158cd92a576a3b3aad88754fc08fa 593 PANTHER PTHR30562:SF1 11 593 2.7E-211 T 22-04-2016 AMK43_RS07320 f8c158cd92a576a3b3aad88754fc08fa 593 PANTHER PTHR30562 11 593 2.7E-211 T 22-04-2016 AMK43_RS07320 f8c158cd92a576a3b3aad88754fc08fa 593 SMART SM00465 16 98 5.3E-23 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily AMK43_RS07320 f8c158cd92a576a3b3aad88754fc08fa 593 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 381 529 9.8E-47 T 22-04-2016 IPR001162 UvrC family homology region AMK43_RS07320 f8c158cd92a576a3b3aad88754fc08fa 593 Pfam PF01541 GIY-YIG catalytic domain 17 93 2.2E-14 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily AMK43_RS07320 f8c158cd92a576a3b3aad88754fc08fa 593 SUPERFAMILY SSF46600 190 241 9.15E-10 T 22-04-2016 IPR001943 UVR domain GO:0005515 AMK43_RS07320 f8c158cd92a576a3b3aad88754fc08fa 593 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 10 576 1.1E-162 T 22-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 AMK43_RS07320 f8c158cd92a576a3b3aad88754fc08fa 593 Gene3D G3DSA:1.10.150.20 543 592 6.3E-19 T 22-04-2016 AMK43_RS07320 f8c158cd92a576a3b3aad88754fc08fa 593 SUPERFAMILY SSF82771 16 99 1.96E-25 T 22-04-2016 IPR000305 GIY-YIG nuclease superfamily AMK43_RS07320 f8c158cd92a576a3b3aad88754fc08fa 593 Gene3D G3DSA:3.40.1440.10 17 96 1.2E-12 T 22-04-2016 IPR027299 GIY-YIG domain AMK43_RS01865 7278f68011184ed428b38b6f1f68c129 343 Pfam PF13407 Periplasmic binding protein domain 41 312 2.5E-62 T 22-04-2016 IPR025997 Periplasmic binding protein AMK43_RS01865 7278f68011184ed428b38b6f1f68c129 343 PANTHER PTHR30036:SF2 34 343 1.4E-123 T 22-04-2016 AMK43_RS01865 7278f68011184ed428b38b6f1f68c129 343 SUPERFAMILY SSF53822 37 342 9.27E-80 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK43_RS01865 7278f68011184ed428b38b6f1f68c129 343 Gene3D G3DSA:3.40.50.2300 181 327 5.1E-38 T 22-04-2016 AMK43_RS01865 7278f68011184ed428b38b6f1f68c129 343 Gene3D G3DSA:3.40.50.2300 37 180 1.4E-39 T 22-04-2016 AMK43_RS01865 7278f68011184ed428b38b6f1f68c129 343 PANTHER PTHR30036 34 343 1.4E-123 T 22-04-2016 AMK43_RS04530 841c8c9ba7f96b552e2080fcf889c4a8 73 Hamap MF_01103 UPF0291 protein . 1 60 12.006 T 22-04-2016 IPR009242 Protein of unknown function DUF896 AMK43_RS04530 841c8c9ba7f96b552e2080fcf889c4a8 73 Gene3D G3DSA:1.10.287.540 1 57 1.6E-20 T 22-04-2016 IPR023218 UPF0291 structural domain AMK43_RS04530 841c8c9ba7f96b552e2080fcf889c4a8 73 SUPERFAMILY SSF158221 1 40 1.83E-10 T 22-04-2016 AMK43_RS04530 841c8c9ba7f96b552e2080fcf889c4a8 73 PANTHER PTHR37300 1 62 6.4E-16 T 22-04-2016 AMK43_RS04530 841c8c9ba7f96b552e2080fcf889c4a8 73 PANTHER PTHR37300:SF1 1 62 6.4E-16 T 22-04-2016 AMK43_RS04530 841c8c9ba7f96b552e2080fcf889c4a8 73 Pfam PF05979 Bacterial protein of unknown function (DUF896) 3 62 1.7E-19 T 22-04-2016 IPR009242 Protein of unknown function DUF896 AMK43_RS07355 58ac6e378cad5d8837a9f783843ffc3e 134 Pfam PF12680 SnoaL-like domain 11 108 1.4E-7 T 22-04-2016 IPR009959 Polyketide cyclase SnoaL-like domain AMK43_RS07355 58ac6e378cad5d8837a9f783843ffc3e 134 SUPERFAMILY SSF54427 4 112 1.83E-13 T 22-04-2016 IPR032710 NTF2-like domain AMK43_RS07355 58ac6e378cad5d8837a9f783843ffc3e 134 Gene3D G3DSA:3.10.450.50 23 114 8.0E-8 T 22-04-2016 IPR032710 NTF2-like domain AMK43_RS11265 2735743101b56640edb113368d950551 351 Gene3D G3DSA:3.20.20.370 250 334 6.7E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK43_RS11265 2735743101b56640edb113368d950551 351 Gene3D G3DSA:3.20.20.370 73 143 6.7E-29 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK43_RS11265 2735743101b56640edb113368d950551 351 Pfam PF01522 Polysaccharide deacetylase 74 146 9.1E-20 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK43_RS11265 2735743101b56640edb113368d950551 351 SUPERFAMILY SSF88713 43 151 9.85E-28 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK43_RS11265 2735743101b56640edb113368d950551 351 SUPERFAMILY SSF88713 262 334 9.85E-28 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK43_RS11265 2735743101b56640edb113368d950551 351 PANTHER PTHR34216 11 156 1.2E-41 T 22-04-2016 AMK43_RS11265 2735743101b56640edb113368d950551 351 PANTHER PTHR34216 241 348 1.2E-41 T 22-04-2016 AMK43_RS00490 02eed7c8141d8f0f064f19fc10940110 59 SUPERFAMILY SSF55129 1 59 5.23E-16 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMK43_RS00490 02eed7c8141d8f0f064f19fc10940110 59 PANTHER PTHR15892 1 59 2.9E-17 T 22-04-2016 AMK43_RS00490 02eed7c8141d8f0f064f19fc10940110 59 Pfam PF00327 Ribosomal protein L30p/L7e 4 53 3.9E-16 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMK43_RS00490 02eed7c8141d8f0f064f19fc10940110 59 PIRSF PIRSF002211 1 59 1.3E-20 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK43_RS00490 02eed7c8141d8f0f064f19fc10940110 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 16.86 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK43_RS00490 02eed7c8141d8f0f064f19fc10940110 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.1E-18 T 22-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 AMK43_RS00490 02eed7c8141d8f0f064f19fc10940110 59 Gene3D G3DSA:3.30.1390.20 1 59 1.1E-21 T 22-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain AMK43_RS09135 b538cb9cd559e582359cd134c254bd02 263 PANTHER PTHR10000 1 263 2.6E-66 T 22-04-2016 AMK43_RS09135 b538cb9cd559e582359cd134c254bd02 263 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 230 1.0E-33 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 AMK43_RS09135 b538cb9cd559e582359cd134c254bd02 263 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 259 2.4E-66 T 22-04-2016 IPR000150 Cof protein GO:0016787 AMK43_RS09135 b538cb9cd559e582359cd134c254bd02 263 PANTHER PTHR10000:SF8 1 263 2.6E-66 T 22-04-2016 AMK43_RS09135 b538cb9cd559e582359cd134c254bd02 263 SUPERFAMILY SSF56784 1 263 1.03E-70 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS09135 b538cb9cd559e582359cd134c254bd02 263 ProSitePatterns PS01229 Hypothetical cof family signature 2. 211 233 - T 22-04-2016 AMK43_RS09135 b538cb9cd559e582359cd134c254bd02 263 Gene3D G3DSA:3.40.50.1000 1 73 9.9E-53 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS09135 b538cb9cd559e582359cd134c254bd02 263 Gene3D G3DSA:3.40.50.1000 176 263 9.9E-53 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS09135 b538cb9cd559e582359cd134c254bd02 263 Gene3D G3DSA:3.30.1240.10 85 175 7.3E-23 T 22-04-2016 AMK43_RS09135 b538cb9cd559e582359cd134c254bd02 263 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 3.2E-68 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS08035 ec5a10ce973079a1bee1b2cde1652cea 274 SMART SM00849 39 259 1.1E-5 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS08035 ec5a10ce973079a1bee1b2cde1652cea 274 SUPERFAMILY SSF56281 42 264 8.39E-23 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS08035 ec5a10ce973079a1bee1b2cde1652cea 274 Pfam PF00753 Metallo-beta-lactamase superfamily 50 211 3.8E-14 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS08035 ec5a10ce973079a1bee1b2cde1652cea 274 PANTHER PTHR23200:SF37 27 274 9.1E-43 T 22-04-2016 AMK43_RS08035 ec5a10ce973079a1bee1b2cde1652cea 274 Gene3D G3DSA:3.60.15.10 25 257 7.8E-27 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS08035 ec5a10ce973079a1bee1b2cde1652cea 274 PANTHER PTHR23200 27 274 9.1E-43 T 22-04-2016 AMK43_RS10760 fd20be95a1598bd70318cb744e274ece 233 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 6.3E-50 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMK43_RS10760 fd20be95a1598bd70318cb744e274ece 233 Gene3D G3DSA:3.40.225.10 2 230 8.1E-78 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMK43_RS10760 fd20be95a1598bd70318cb744e274ece 233 PANTHER PTHR22789:SF8 1 230 2.3E-144 T 22-04-2016 AMK43_RS10760 fd20be95a1598bd70318cb744e274ece 233 SMART SM01007 7 197 1.9E-72 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMK43_RS10760 fd20be95a1598bd70318cb744e274ece 233 PANTHER PTHR22789 1 230 2.3E-144 T 22-04-2016 AMK43_RS10760 fd20be95a1598bd70318cb744e274ece 233 SUPERFAMILY SSF53639 1 222 2.75E-72 T 22-04-2016 IPR001303 Class II aldolase/adducin N-terminal AMK43_RS10760 fd20be95a1598bd70318cb744e274ece 233 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 230 3.2E-123 T 22-04-2016 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 SUPERFAMILY SSF55424 325 443 4.64E-22 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 277 284 7.1E-15 T 22-04-2016 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 238 252 7.1E-15 T 22-04-2016 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 177 7.1E-15 T 22-04-2016 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 7.1E-15 T 22-04-2016 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 Gene3D G3DSA:3.50.50.60 111 315 9.8E-44 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 Gene3D G3DSA:3.30.390.30 336 443 5.0E-22 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 SUPERFAMILY SSF51905 2 194 5.76E-35 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 330 430 1.0E-9 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 PANTHER PTHR22912:SF140 1 441 2.2E-86 T 22-04-2016 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 SUPERFAMILY SSF51905 151 319 7.77E-27 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 284 4.1E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 284 1.0E-21 T 22-04-2016 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 152 170 1.0E-21 T 22-04-2016 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 101 119 1.0E-21 T 22-04-2016 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 1.0E-21 T 22-04-2016 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 1.0E-21 T 22-04-2016 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 PANTHER PTHR22912 1 441 2.2E-86 T 22-04-2016 AMK43_RS03015 dd6711720ddc031478e7a37c1a19eaac 445 Gene3D G3DSA:3.50.50.60 1 110 7.7E-22 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS08530 1814ef298cd55dc253da76065f85ba0c 313 PIRSF PIRSF028757 1 313 2.5E-89 T 22-04-2016 IPR003507 Peptidase family S66 AMK43_RS08530 1814ef298cd55dc253da76065f85ba0c 313 Pfam PF02016 LD-carboxypeptidase 14 302 1.9E-77 T 22-04-2016 IPR003507 Peptidase family S66 AMK43_RS08530 1814ef298cd55dc253da76065f85ba0c 313 SUPERFAMILY SSF52317 1 162 3.39E-45 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS08530 1814ef298cd55dc253da76065f85ba0c 313 SUPERFAMILY SSF141986 143 307 9.42E-38 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain AMK43_RS08530 1814ef298cd55dc253da76065f85ba0c 313 PANTHER PTHR30237 1 312 1.3E-89 T 22-04-2016 AMK43_RS08530 1814ef298cd55dc253da76065f85ba0c 313 PANTHER PTHR30237:SF2 1 312 1.3E-89 T 22-04-2016 AMK43_RS08530 1814ef298cd55dc253da76065f85ba0c 313 Gene3D G3DSA:3.50.30.60 179 309 1.8E-40 T 22-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain AMK43_RS08530 1814ef298cd55dc253da76065f85ba0c 313 Gene3D G3DSA:3.40.50.10740 1 165 3.5E-49 T 22-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain AMK43_RS08090 915223b17c9e1ee1d769124691a230a5 231 Pfam PF01177 Asp/Glu/Hydantoin racemase 9 225 6.9E-61 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS08090 915223b17c9e1ee1d769124691a230a5 231 SUPERFAMILY SSF53681 106 216 4.91E-31 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS08090 915223b17c9e1ee1d769124691a230a5 231 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 81 90 - T 22-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS08090 915223b17c9e1ee1d769124691a230a5 231 PANTHER PTHR21198:SF7 1 225 3.5E-84 T 22-04-2016 AMK43_RS08090 915223b17c9e1ee1d769124691a230a5 231 SUPERFAMILY SSF53681 4 118 1.41E-37 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS08090 915223b17c9e1ee1d769124691a230a5 231 TIGRFAM TIGR00035 asp_race: aspartate racemase 4 225 5.9E-75 T 22-04-2016 IPR004380 Aspartate racemase GO:0006520|GO:0016855 AMK43_RS08090 915223b17c9e1ee1d769124691a230a5 231 PANTHER PTHR21198 1 225 3.5E-84 T 22-04-2016 AMK43_RS08090 915223b17c9e1ee1d769124691a230a5 231 Gene3D G3DSA:3.40.50.1860 4 115 4.7E-45 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS08090 915223b17c9e1ee1d769124691a230a5 231 Gene3D G3DSA:3.40.50.1860 116 217 9.3E-35 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS06180 59f50462a1ec7c451efa989db2687115 685 Gene3D G3DSA:1.10.3810.10 78 260 5.0E-67 T 22-04-2016 AMK43_RS06180 59f50462a1ec7c451efa989db2687115 685 Pfam PF00912 Transglycosylase 75 244 7.3E-60 T 22-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 AMK43_RS06180 59f50462a1ec7c451efa989db2687115 685 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 85 620 1.1E-173 T 22-04-2016 AMK43_RS06180 59f50462a1ec7c451efa989db2687115 685 SUPERFAMILY SSF53955 66 267 9.0E-70 T 22-04-2016 IPR023346 Lysozyme-like domain AMK43_RS06180 59f50462a1ec7c451efa989db2687115 685 PANTHER PTHR32282 1 675 5.7E-197 T 22-04-2016 AMK43_RS06180 59f50462a1ec7c451efa989db2687115 685 Pfam PF00905 Penicillin binding protein transpeptidase domain 349 617 2.2E-31 T 22-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 AMK43_RS06180 59f50462a1ec7c451efa989db2687115 685 SUPERFAMILY SSF56601 286 675 1.45E-107 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS06180 59f50462a1ec7c451efa989db2687115 685 SUPERFAMILY SSF56601 229 248 1.45E-107 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS06180 59f50462a1ec7c451efa989db2687115 685 Gene3D G3DSA:3.40.710.10 288 675 2.0E-111 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS06180 59f50462a1ec7c451efa989db2687115 685 PANTHER PTHR32282:SF5 1 675 5.7E-197 T 22-04-2016 AMK43_RS01625 0f3b085f09b295c5b171820f0004bcdb 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 22-04-2016 IPR023772 DNA-binding HTH domain, TetR-type, conserved site AMK43_RS01625 0f3b085f09b295c5b171820f0004bcdb 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 2.2E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK43_RS01625 0f3b085f09b295c5b171820f0004bcdb 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 2.2E-9 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK43_RS01625 0f3b085f09b295c5b171820f0004bcdb 207 Gene3D G3DSA:1.10.357.10 9 192 3.8E-33 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK43_RS01625 0f3b085f09b295c5b171820f0004bcdb 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 2.8E-16 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK43_RS01625 0f3b085f09b295c5b171820f0004bcdb 207 PANTHER PTHR30055 2 199 3.7E-26 T 22-04-2016 AMK43_RS01625 0f3b085f09b295c5b171820f0004bcdb 207 PANTHER PTHR30055:SF47 2 199 3.7E-26 T 22-04-2016 AMK43_RS01625 0f3b085f09b295c5b171820f0004bcdb 207 SUPERFAMILY SSF46689 6 76 9.93E-19 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS08610 606c8015ef9a29a85e9e7e1193b65e52 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 9.2E-49 T 22-04-2016 IPR004624 PhnA protein AMK43_RS08610 606c8015ef9a29a85e9e7e1193b65e52 111 SUPERFAMILY SSF82057 38 110 7.78E-27 T 22-04-2016 AMK43_RS08610 606c8015ef9a29a85e9e7e1193b65e52 111 Gene3D G3DSA:2.30.30.40 41 110 1.6E-35 T 22-04-2016 AMK43_RS08610 606c8015ef9a29a85e9e7e1193b65e52 111 Gene3D G3DSA:2.20.25.10 1 40 1.4E-20 T 22-04-2016 AMK43_RS08610 606c8015ef9a29a85e9e7e1193b65e52 111 Pfam PF03831 PhnA domain 43 111 8.5E-34 T 22-04-2016 IPR013988 PhnA protein, C-terminal AMK43_RS08610 606c8015ef9a29a85e9e7e1193b65e52 111 SUPERFAMILY SSF57783 1 35 5.27E-14 T 22-04-2016 AMK43_RS08610 606c8015ef9a29a85e9e7e1193b65e52 111 PANTHER PTHR30305 1 111 6.0E-73 T 22-04-2016 AMK43_RS08610 606c8015ef9a29a85e9e7e1193b65e52 111 Pfam PF08274 PhnA Zinc-Ribbon 2 31 1.4E-15 T 22-04-2016 IPR013987 PhnA protein, N-terminal AMK43_RS00530 c43cbd76f40da26de13f29e5996fac3c 252 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 2 243 5.4E-107 T 22-04-2016 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 AMK43_RS00530 c43cbd76f40da26de13f29e5996fac3c 252 SMART SM00382 28 237 5.5E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS00530 c43cbd76f40da26de13f29e5996fac3c 252 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS00530 c43cbd76f40da26de13f29e5996fac3c 252 Gene3D G3DSA:3.40.50.300 2 241 9.3E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00530 c43cbd76f40da26de13f29e5996fac3c 252 PANTHER PTHR24220:SF408 4 250 1.6E-104 T 22-04-2016 AMK43_RS00530 c43cbd76f40da26de13f29e5996fac3c 252 Pfam PF00005 ABC transporter 19 175 9.5E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS00530 c43cbd76f40da26de13f29e5996fac3c 252 SUPERFAMILY SSF52540 2 241 5.04E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00530 c43cbd76f40da26de13f29e5996fac3c 252 PANTHER PTHR24220 4 250 1.6E-104 T 22-04-2016 AMK43_RS06495 1246ac94045ce44726410c5d8424d703 3734 SUPERFAMILY SSF103515 3424 3731 6.8E-19 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS06495 1246ac94045ce44726410c5d8424d703 3734 SMART SM00869 3453 3726 1.2E-10 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS00885 245ad687a627823ae0abcca6b78ae9f3 336 PANTHER PTHR37477 2 333 7.5E-73 T 22-04-2016 AMK43_RS00885 245ad687a627823ae0abcca6b78ae9f3 336 SUPERFAMILY SSF159672 1 216 6.67E-54 T 22-04-2016 AMK43_RS00885 245ad687a627823ae0abcca6b78ae9f3 336 Pfam PF11761 Cobalamin biosynthesis central region 139 197 6.7E-5 T 22-04-2016 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377|UniPathway: UPA00148 AMK43_RS00885 245ad687a627823ae0abcca6b78ae9f3 336 Pfam PF01890 Cobalamin synthesis G C-terminus 209 327 2.3E-30 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 AMK43_RS00885 245ad687a627823ae0abcca6b78ae9f3 336 PANTHER PTHR37477:SF1 2 333 7.5E-73 T 22-04-2016 AMK43_RS00885 245ad687a627823ae0abcca6b78ae9f3 336 SUPERFAMILY SSF159664 203 330 4.97E-35 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 AMK43_RS00885 245ad687a627823ae0abcca6b78ae9f3 336 Pfam PF11760 Cobalamin synthesis G N-terminal 55 134 4.4E-29 T 22-04-2016 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377|UniPathway: UPA00148 AMK43_RS00885 245ad687a627823ae0abcca6b78ae9f3 336 Gene3D G3DSA:3.30.420.180 201 331 5.2E-44 T 22-04-2016 IPR002750 CobE/GbiG C-terminal domain GO:0009236 AMK43_RS07220 4ddf9af24c74035fc1fa3c16cfaac4de 142 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 65 105 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMK43_RS07220 4ddf9af24c74035fc1fa3c16cfaac4de 142 Gene3D G3DSA:3.40.140.10 7 142 2.9E-47 T 22-04-2016 AMK43_RS07220 4ddf9af24c74035fc1fa3c16cfaac4de 142 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 18 142 1.0E-43 T 22-04-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 AMK43_RS07220 4ddf9af24c74035fc1fa3c16cfaac4de 142 PANTHER PTHR11644 13 142 3.8E-54 T 22-04-2016 AMK43_RS07220 4ddf9af24c74035fc1fa3c16cfaac4de 142 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 17 115 4.7E-15 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AMK43_RS07220 4ddf9af24c74035fc1fa3c16cfaac4de 142 SUPERFAMILY SSF53927 14 142 1.32E-42 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK43_RS10010 b365581303e0b10381ce717218bafa52 334 PANTHER PTHR30137 1 330 1.0E-108 T 22-04-2016 AMK43_RS10010 b365581303e0b10381ce717218bafa52 334 Gene3D G3DSA:3.20.20.30 7 329 1.2E-69 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK43_RS10010 b365581303e0b10381ce717218bafa52 334 SUPERFAMILY SSF51679 8 330 1.16E-64 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK43_RS10010 b365581303e0b10381ce717218bafa52 334 Pfam PF00296 Luciferase-like monooxygenase 25 247 7.8E-28 T 22-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 AMK43_RS10010 b365581303e0b10381ce717218bafa52 334 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 9 330 4.7E-107 T 22-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 AMK43_RS10010 b365581303e0b10381ce717218bafa52 334 PANTHER PTHR30137:SF2 1 330 1.0E-108 T 22-04-2016 AMK43_RS01270 1044bfab277db5ace566f87853aec4e1 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01270 1044bfab277db5ace566f87853aec4e1 37 SUPERFAMILY SSF57840 1 37 6.54E-16 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01270 1044bfab277db5ace566f87853aec4e1 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 3.1E-22 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01270 1044bfab277db5ace566f87853aec4e1 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 16.38 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01270 1044bfab277db5ace566f87853aec4e1 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 2.0E-8 T 22-04-2016 AMK43_RS01270 1044bfab277db5ace566f87853aec4e1 37 PANTHER PTHR18804 1 37 6.0E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01270 1044bfab277db5ace566f87853aec4e1 37 Pfam PF00444 Ribosomal protein L36 1 37 3.6E-17 T 22-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS02720 81b3b1a13de63a22e052a82480309374 331 Gene3D G3DSA:3.30.390.50 243 330 8.9E-31 T 22-04-2016 AMK43_RS02720 81b3b1a13de63a22e052a82480309374 331 SUPERFAMILY SSF55681 3 242 5.4E-78 T 22-04-2016 AMK43_RS02720 81b3b1a13de63a22e052a82480309374 331 Pfam PF03099 Biotin/lipoate A/B protein ligase family 48 155 1.1E-9 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AMK43_RS02720 81b3b1a13de63a22e052a82480309374 331 PANTHER PTHR12561:SF3 1 331 3.1E-113 T 22-04-2016 AMK43_RS02720 81b3b1a13de63a22e052a82480309374 331 SUPERFAMILY SSF82649 243 330 1.2E-24 T 22-04-2016 AMK43_RS02720 81b3b1a13de63a22e052a82480309374 331 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 244 329 2.2E-27 T 22-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 AMK43_RS02720 81b3b1a13de63a22e052a82480309374 331 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 3 320 5.3E-97 T 22-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 AMK43_RS02720 81b3b1a13de63a22e052a82480309374 331 PANTHER PTHR12561 1 331 3.1E-113 T 22-04-2016 AMK43_RS02720 81b3b1a13de63a22e052a82480309374 331 Gene3D G3DSA:3.90.1550.10 2 242 4.0E-86 T 22-04-2016 AMK43_RS00525 377040c5648cd8612d952a2f74ba6b28 329 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 30 301 1.3E-50 T 22-04-2016 AMK43_RS00525 377040c5648cd8612d952a2f74ba6b28 329 Gene3D G3DSA:3.40.190.10 54 178 9.7E-4 T 22-04-2016 AMK43_RS00525 377040c5648cd8612d952a2f74ba6b28 329 SUPERFAMILY SSF53850 26 300 1.22E-29 T 22-04-2016 AMK43_RS00525 377040c5648cd8612d952a2f74ba6b28 329 PANTHER PTHR35841 7 220 7.7E-27 T 22-04-2016 AMK43_RS00525 377040c5648cd8612d952a2f74ba6b28 329 PANTHER PTHR35841 236 298 7.7E-27 T 22-04-2016 AMK43_RS00525 377040c5648cd8612d952a2f74ba6b28 329 PANTHER PTHR35841:SF2 7 220 7.7E-27 T 22-04-2016 AMK43_RS00525 377040c5648cd8612d952a2f74ba6b28 329 PANTHER PTHR35841:SF2 236 298 7.7E-27 T 22-04-2016 AMK43_RS05965 b9cb1266aab9e4106b085a3fff039618 311 SUPERFAMILY SSF53633 3 309 5.63E-84 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS05965 b9cb1266aab9e4106b085a3fff039618 311 TIGRFAM TIGR00746 arcC: carbamate kinase 3 309 3.5E-120 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AMK43_RS05965 b9cb1266aab9e4106b085a3fff039618 311 PIRSF PIRSF000723 1 311 1.6E-128 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AMK43_RS05965 b9cb1266aab9e4106b085a3fff039618 311 PRINTS PR01469 Bacterial carbamate kinase signature 265 280 2.6E-61 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AMK43_RS05965 b9cb1266aab9e4106b085a3fff039618 311 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 2.6E-61 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AMK43_RS05965 b9cb1266aab9e4106b085a3fff039618 311 PRINTS PR01469 Bacterial carbamate kinase signature 210 225 2.6E-61 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AMK43_RS05965 b9cb1266aab9e4106b085a3fff039618 311 PRINTS PR01469 Bacterial carbamate kinase signature 157 176 2.6E-61 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AMK43_RS05965 b9cb1266aab9e4106b085a3fff039618 311 PRINTS PR01469 Bacterial carbamate kinase signature 39 58 2.6E-61 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AMK43_RS05965 b9cb1266aab9e4106b085a3fff039618 311 PRINTS PR01469 Bacterial carbamate kinase signature 180 198 2.6E-61 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AMK43_RS05965 b9cb1266aab9e4106b085a3fff039618 311 PRINTS PR01469 Bacterial carbamate kinase signature 108 127 2.6E-61 T 22-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 AMK43_RS05965 b9cb1266aab9e4106b085a3fff039618 311 Gene3D G3DSA:3.40.1160.10 1 309 1.3E-110 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS05965 b9cb1266aab9e4106b085a3fff039618 311 Pfam PF00696 Amino acid kinase family 3 284 8.6E-33 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS05965 b9cb1266aab9e4106b085a3fff039618 311 PANTHER PTHR30409:SF1 1 311 1.2E-147 T 22-04-2016 AMK43_RS05965 b9cb1266aab9e4106b085a3fff039618 311 PANTHER PTHR30409 1 311 1.2E-147 T 22-04-2016 AMK43_RS08055 e10cf9c26ce0fc9b14ae9b7cbf350951 401 Gene3D G3DSA:3.90.550.10 97 244 4.0E-4 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS08055 e10cf9c26ce0fc9b14ae9b7cbf350951 401 Pfam PF13506 Glycosyl transferase family 21 104 272 9.7E-36 T 22-04-2016 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|UniPathway: UPA00222 AMK43_RS08055 e10cf9c26ce0fc9b14ae9b7cbf350951 401 SUPERFAMILY SSF53448 69 337 4.13E-12 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS08055 e10cf9c26ce0fc9b14ae9b7cbf350951 401 PANTHER PTHR12726 1 398 1.8E-47 T 22-04-2016 AMK43_RS06025 3dfd65c56488d4f1bbb720b21139d595 110 Pfam PF13331 Domain of unknown function (DUF4093) 23 106 8.9E-26 T 22-04-2016 IPR025156 Ribonuclease M5, C-terminal domain AMK43_RS06025 3dfd65c56488d4f1bbb720b21139d595 110 PANTHER PTHR39156 12 109 3.7E-19 T 22-04-2016 AMK43_RS04305 87759d2092b067f0a607fb080af68da0 108 Gene3D G3DSA:3.30.160.100 1 100 8.3E-30 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMK43_RS04305 87759d2092b067f0a607fb080af68da0 108 SUPERFAMILY SSF69754 1 105 2.62E-28 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMK43_RS04305 87759d2092b067f0a607fb080af68da0 108 PANTHER PTHR33231 1 100 1.6E-25 T 22-04-2016 AMK43_RS04305 87759d2092b067f0a607fb080af68da0 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 98 7.3E-23 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMK43_RS04305 87759d2092b067f0a607fb080af68da0 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 2.0E-28 T 22-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 AMK43_RS08520 1510dfca170a68ebe8eaf0dfce89ef8a 128 PANTHER PTHR32502:SF5 1 128 2.7E-39 T 22-04-2016 AMK43_RS08520 1510dfca170a68ebe8eaf0dfce89ef8a 128 PANTHER PTHR32502 1 128 2.7E-39 T 22-04-2016 AMK43_RS08520 1510dfca170a68ebe8eaf0dfce89ef8a 128 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 1 128 4.8E-29 T 22-04-2016 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 AMK43_RS04545 aaf66a2baac264a2935573cbb2849f18 138 Gene3D G3DSA:1.10.3210.10 75 129 8.5E-6 T 22-04-2016 IPR006674 HD domain AMK43_RS04545 aaf66a2baac264a2935573cbb2849f18 138 Pfam PF01966 HD domain 45 123 2.6E-9 T 22-04-2016 IPR006674 HD domain AMK43_RS04545 aaf66a2baac264a2935573cbb2849f18 138 Gene3D G3DSA:1.20.58.150 20 74 7.7E-4 T 22-04-2016 IPR014712 Phosphoinositide-binding clathrin adaptor, domain 2 GO:0005545|GO:0030136|GO:0030276|GO:0048268 AMK43_RS04545 aaf66a2baac264a2935573cbb2849f18 138 SUPERFAMILY SSF109604 20 132 3.84E-9 T 22-04-2016 AMK43_RS09855 98743a9941238854fc7f6e887a93edfa 384 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 8 372 5.3E-161 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK43_RS09855 98743a9941238854fc7f6e887a93edfa 384 PANTHER PTHR21148 1 370 5.4E-170 T 22-04-2016 AMK43_RS09855 98743a9941238854fc7f6e887a93edfa 384 PANTHER PTHR21148:SF26 1 370 5.4E-170 T 22-04-2016 AMK43_RS09855 98743a9941238854fc7f6e887a93edfa 384 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 364 55.867 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK43_RS09855 98743a9941238854fc7f6e887a93edfa 384 Gene3D G3DSA:3.20.20.105 4 371 1.5E-164 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK43_RS09855 98743a9941238854fc7f6e887a93edfa 384 Pfam PF01702 Queuine tRNA-ribosyltransferase 131 366 2.3E-90 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK43_RS09855 98743a9941238854fc7f6e887a93edfa 384 SUPERFAMILY SSF51713 6 370 6.93E-153 T 22-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK43_RS09855 98743a9941238854fc7f6e887a93edfa 384 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 372 7.2E-169 T 22-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 AMK43_RS01540 6df6c55d3286cb4a5703e78ea93f831b 229 PANTHER PTHR18895 9 221 2.8E-23 T 22-04-2016 AMK43_RS01540 6df6c55d3286cb4a5703e78ea93f831b 229 Pfam PF05175 Methyltransferase small domain 56 133 1.3E-9 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 AMK43_RS01540 6df6c55d3286cb4a5703e78ea93f831b 229 Gene3D G3DSA:3.40.50.150 31 219 8.1E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS01540 6df6c55d3286cb4a5703e78ea93f831b 229 SUPERFAMILY SSF53335 9 215 4.29E-22 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS01540 6df6c55d3286cb4a5703e78ea93f831b 229 PANTHER PTHR18895:SF75 9 221 2.8E-23 T 22-04-2016 AMK43_RS01540 6df6c55d3286cb4a5703e78ea93f831b 229 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 125 131 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK43_RS08845 fcba4e366f7e5885f194f5e4fd56ac57 359 SMART SM00937 63 177 4.4E-62 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AMK43_RS08845 fcba4e366f7e5885f194f5e4fd56ac57 359 Gene3D G3DSA:1.20.58.410 4 92 7.5E-17 T 22-04-2016 AMK43_RS08845 fcba4e366f7e5885f194f5e4fd56ac57 359 PANTHER PTHR11075 1 355 1.1E-176 T 22-04-2016 AMK43_RS08845 fcba4e366f7e5885f194f5e4fd56ac57 359 PANTHER PTHR11075:SF9 1 355 1.1E-176 T 22-04-2016 AMK43_RS08845 fcba4e366f7e5885f194f5e4fd56ac57 359 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 227 243 - T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMK43_RS08845 fcba4e366f7e5885f194f5e4fd56ac57 359 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 356 40.546 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AMK43_RS08845 fcba4e366f7e5885f194f5e4fd56ac57 359 SUPERFAMILY SSF75620 11 352 3.14E-139 T 22-04-2016 AMK43_RS08845 fcba4e366f7e5885f194f5e4fd56ac57 359 Pfam PF00472 RF-1 domain 212 320 1.9E-44 T 22-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 AMK43_RS08845 fcba4e366f7e5885f194f5e4fd56ac57 359 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 355 5.9E-161 T 22-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 AMK43_RS08845 fcba4e366f7e5885f194f5e4fd56ac57 359 Gene3D G3DSA:3.30.160.20 212 288 2.4E-36 T 22-04-2016 IPR014720 Double-stranded RNA-binding domain AMK43_RS08845 fcba4e366f7e5885f194f5e4fd56ac57 359 Pfam PF03462 PCRF domain 11 202 5.1E-72 T 22-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 AMK43_RS03935 63f78ecdc793e9aff9ff2e0cdac44629 354 Pfam PF04932 O-Antigen ligase 167 293 1.1E-8 T 22-04-2016 IPR007016 O-antigen ligase-related AMK43_RS05095 2fa9fbaeee3dcac73c072a95f5d177cc 229 PANTHER PTHR30399 1 223 5.2E-36 T 22-04-2016 AMK43_RS05095 2fa9fbaeee3dcac73c072a95f5d177cc 229 Pfam PF01863 Protein of unknown function DUF45 17 225 1.4E-56 T 22-04-2016 IPR002725 Protein of unknown function DUF45 AMK43_RS06710 627748db6c2915c57338a3dcb28adca1 292 SUPERFAMILY SSF54427 51 160 8.22E-8 T 22-04-2016 IPR032710 NTF2-like domain AMK43_RS06710 627748db6c2915c57338a3dcb28adca1 292 Pfam PF14485 Domain of unknown function (DUF4431) 241 288 1.1E-18 T 22-04-2016 IPR027826 Domain of unknown function DUF4431 AMK43_RS01730 a1c15404614f3fc906c4a9580c98aa72 273 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS01730 a1c15404614f3fc906c4a9580c98aa72 273 Pfam PF00005 ABC transporter 32 180 6.9E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS01730 a1c15404614f3fc906c4a9580c98aa72 273 SUPERFAMILY SSF52540 10 225 6.25E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01730 a1c15404614f3fc906c4a9580c98aa72 273 Gene3D G3DSA:3.40.50.300 5 234 1.3E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01730 a1c15404614f3fc906c4a9580c98aa72 273 SMART SM00382 40 228 8.9E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS01730 a1c15404614f3fc906c4a9580c98aa72 273 PANTHER PTHR24220:SF582 9 261 3.7E-82 T 22-04-2016 AMK43_RS01730 a1c15404614f3fc906c4a9580c98aa72 273 PANTHER PTHR24220 9 261 3.7E-82 T 22-04-2016 AMK43_RS07300 21e836fb349ebf635b1ca80f7bd58e97 289 PANTHER PTHR32196 11 289 3.4E-110 T 22-04-2016 AMK43_RS07300 21e836fb349ebf635b1ca80f7bd58e97 289 PANTHER PTHR32196:SF40 11 289 3.4E-110 T 22-04-2016 AMK43_RS07300 21e836fb349ebf635b1ca80f7bd58e97 289 Pfam PF02653 Branched-chain amino acid transport system / permease component 11 270 2.0E-34 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK43_RS03205 36d7dd47fc2e391f1aaaf2a27f401e0d 350 SUPERFAMILY SSF52374 3 174 8.59E-19 T 22-04-2016 AMK43_RS03205 36d7dd47fc2e391f1aaaf2a27f401e0d 350 Gene3D G3DSA:3.40.50.300 183 322 9.0E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03205 36d7dd47fc2e391f1aaaf2a27f401e0d 350 PANTHER PTHR37512 5 306 6.8E-56 T 22-04-2016 AMK43_RS03205 36d7dd47fc2e391f1aaaf2a27f401e0d 350 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 74 2.2E-14 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK43_RS03205 36d7dd47fc2e391f1aaaf2a27f401e0d 350 Pfam PF13521 AAA domain 184 298 3.5E-11 T 22-04-2016 AMK43_RS03205 36d7dd47fc2e391f1aaaf2a27f401e0d 350 PIRSF PIRSF004776 1 350 3.5E-93 T 22-04-2016 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22|UniPathway: UPA00253|UniPathway: UPA00253 AMK43_RS03205 36d7dd47fc2e391f1aaaf2a27f401e0d 350 SUPERFAMILY SSF52540 183 322 1.6E-13 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03205 36d7dd47fc2e391f1aaaf2a27f401e0d 350 Pfam PF01467 Cytidylyltransferase-like 7 163 6.5E-6 T 22-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 AMK43_RS03205 36d7dd47fc2e391f1aaaf2a27f401e0d 350 Gene3D G3DSA:3.40.50.620 3 180 3.2E-44 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS07745 4f1af949efa6d83156b3a9284ba35b6e 245 SUPERFAMILY SSF53335 35 192 4.59E-32 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07745 4f1af949efa6d83156b3a9284ba35b6e 245 PANTHER PTHR18895:SF75 15 238 3.4E-66 T 22-04-2016 AMK43_RS07745 4f1af949efa6d83156b3a9284ba35b6e 245 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK43_RS07745 4f1af949efa6d83156b3a9284ba35b6e 245 Gene3D G3DSA:3.40.50.150 29 241 1.0E-62 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07745 4f1af949efa6d83156b3a9284ba35b6e 245 Pfam PF13847 Methyltransferase domain 41 140 7.8E-15 T 22-04-2016 IPR025714 Methyltransferase domain AMK43_RS07745 4f1af949efa6d83156b3a9284ba35b6e 245 PANTHER PTHR18895 15 238 3.4E-66 T 22-04-2016 AMK43_RS07710 bb23b64f2133940f27ab2b4b489a3ce5 442 PRINTS PR00143 Citrate synthase signature 227 242 3.9E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK43_RS07710 bb23b64f2133940f27ab2b4b489a3ce5 442 PRINTS PR00143 Citrate synthase signature 399 413 3.9E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK43_RS07710 bb23b64f2133940f27ab2b4b489a3ce5 442 PRINTS PR00143 Citrate synthase signature 171 184 3.9E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK43_RS07710 bb23b64f2133940f27ab2b4b489a3ce5 442 PRINTS PR00143 Citrate synthase signature 250 278 3.9E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK43_RS07710 bb23b64f2133940f27ab2b4b489a3ce5 442 PRINTS PR00143 Citrate synthase signature 314 334 3.9E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK43_RS07710 bb23b64f2133940f27ab2b4b489a3ce5 442 PRINTS PR00143 Citrate synthase signature 379 395 3.9E-36 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK43_RS07710 bb23b64f2133940f27ab2b4b489a3ce5 442 Gene3D G3DSA:1.10.580.10 15 328 1.0E-77 T 22-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 AMK43_RS07710 bb23b64f2133940f27ab2b4b489a3ce5 442 PIRSF PIRSF001369 52 439 7.9E-84 T 22-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 AMK43_RS07710 bb23b64f2133940f27ab2b4b489a3ce5 442 PANTHER PTHR11739:SF4 63 432 3.3E-100 T 22-04-2016 AMK43_RS07710 bb23b64f2133940f27ab2b4b489a3ce5 442 SUPERFAMILY SSF48256 22 435 1.96E-87 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK43_RS07710 bb23b64f2133940f27ab2b4b489a3ce5 442 Pfam PF00285 Citrate synthase, C-terminal domain 39 430 3.2E-107 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK43_RS07710 bb23b64f2133940f27ab2b4b489a3ce5 442 PANTHER PTHR11739 63 432 3.3E-100 T 22-04-2016 IPR002020 Citrate synthase GO:0046912 AMK43_RS03210 e260019b92244173e426cc2be87ef633 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 1.7E-16 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS03210 e260019b92244173e426cc2be87ef633 49 SUPERFAMILY SSF57829 1 49 4.33E-17 T 22-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 AMK43_RS03210 e260019b92244173e426cc2be87ef633 49 Pfam PF00471 Ribosomal protein L33 3 49 5.7E-19 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS03210 e260019b92244173e426cc2be87ef633 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 16.597 T 22-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS03210 e260019b92244173e426cc2be87ef633 49 PANTHER PTHR15238:SF3 1 49 1.7E-20 T 22-04-2016 AMK43_RS03210 e260019b92244173e426cc2be87ef633 49 PANTHER PTHR15238 1 49 1.7E-20 T 22-04-2016 AMK43_RS01975 41ad86227727f9095e981c42f0b52b78 319 Pfam PF01297 Zinc-uptake complex component A periplasmic 44 304 2.5E-50 T 22-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 AMK43_RS01975 41ad86227727f9095e981c42f0b52b78 319 SUPERFAMILY SSF53807 42 317 7.85E-65 T 22-04-2016 AMK43_RS01975 41ad86227727f9095e981c42f0b52b78 319 PANTHER PTHR30477:SF1 151 314 5.5E-47 T 22-04-2016 AMK43_RS01975 41ad86227727f9095e981c42f0b52b78 319 PANTHER PTHR30477:SF1 30 130 5.5E-47 T 22-04-2016 AMK43_RS01975 41ad86227727f9095e981c42f0b52b78 319 Gene3D G3DSA:3.40.50.1980 222 317 4.8E-22 T 22-04-2016 AMK43_RS01975 41ad86227727f9095e981c42f0b52b78 319 PANTHER PTHR30477 151 314 5.5E-47 T 22-04-2016 AMK43_RS01975 41ad86227727f9095e981c42f0b52b78 319 PANTHER PTHR30477 30 130 5.5E-47 T 22-04-2016 AMK43_RS01975 41ad86227727f9095e981c42f0b52b78 319 Gene3D G3DSA:3.40.50.1980 42 219 1.1E-38 T 22-04-2016 AMK43_RS03930 913e2cf7673031e183f11e32b064f829 725 Pfam PF01136 Peptidase family U32 74 279 1.5E-65 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK43_RS03930 913e2cf7673031e183f11e32b064f829 725 PANTHER PTHR30217 1 719 7.5E-171 T 22-04-2016 AMK43_RS03930 913e2cf7673031e183f11e32b064f829 725 PANTHER PTHR30217:SF10 1 719 7.5E-171 T 22-04-2016 AMK43_RS03930 913e2cf7673031e183f11e32b064f829 725 ProSitePatterns PS01276 Peptidase family U32 signature. 158 176 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK43_RS03930 913e2cf7673031e183f11e32b064f829 725 Pfam PF12392 Collagenase 363 483 5.2E-18 T 22-04-2016 IPR020988 Peptidase U32, collagenase KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK43_RS05760 873cafa2c10628e1a8482db0b3123c71 1025 Pfam PF11907 Domain of unknown function (DUF3427) 759 1022 5.2E-45 T 22-04-2016 IPR021835 Protein of unknown function DUF3427 AMK43_RS05760 873cafa2c10628e1a8482db0b3123c71 1025 Gene3D G3DSA:3.30.870.10 99 232 2.0E-6 T 22-04-2016 AMK43_RS05760 873cafa2c10628e1a8482db0b3123c71 1025 Gene3D G3DSA:3.40.50.300 257 425 1.3E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05760 873cafa2c10628e1a8482db0b3123c71 1025 Gene3D G3DSA:3.40.50.300 489 641 3.5E-25 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05760 873cafa2c10628e1a8482db0b3123c71 1025 SMART SM00490 516 601 1.2E-13 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS05760 873cafa2c10628e1a8482db0b3123c71 1025 PANTHER PTHR30195 94 950 3.0E-28 T 22-04-2016 AMK43_RS05760 873cafa2c10628e1a8482db0b3123c71 1025 Pfam PF00271 Helicase conserved C-terminal domain 508 599 5.4E-15 T 22-04-2016 IPR001650 Helicase, C-terminal AMK43_RS05760 873cafa2c10628e1a8482db0b3123c71 1025 Pfam PF13091 PLD-like domain 98 227 1.2E-11 T 22-04-2016 IPR025202 Phospholipase D-like domain AMK43_RS05760 873cafa2c10628e1a8482db0b3123c71 1025 SMART SM00487 266 456 3.1E-19 T 22-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain AMK43_RS05760 873cafa2c10628e1a8482db0b3123c71 1025 SUPERFAMILY SSF52540 489 622 3.44E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05760 873cafa2c10628e1a8482db0b3123c71 1025 SUPERFAMILY SSF52540 319 461 3.44E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05760 873cafa2c10628e1a8482db0b3123c71 1025 Pfam PF04851 Type III restriction enzyme, res subunit 268 421 6.5E-36 T 22-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 AMK43_RS05760 873cafa2c10628e1a8482db0b3123c71 1025 SUPERFAMILY SSF56024 91 230 1.76E-6 T 22-04-2016 AMK43_RS05760 873cafa2c10628e1a8482db0b3123c71 1025 PANTHER PTHR30195:SF16 94 950 3.0E-28 T 22-04-2016 AMK43_RS08205 52333e15d4687951850c737d788380f1 249 Pfam PF04474 Protein of unknown function (DUF554) 1 238 1.5E-65 T 22-04-2016 IPR007563 Protein of unknown function DUF554 AMK43_RS08205 52333e15d4687951850c737d788380f1 249 PANTHER PTHR36111 108 247 1.6E-74 T 22-04-2016 AMK43_RS08205 52333e15d4687951850c737d788380f1 249 PANTHER PTHR36111 1 89 1.6E-74 T 22-04-2016 AMK43_RS08205 52333e15d4687951850c737d788380f1 249 PANTHER PTHR36111:SF2 108 247 1.6E-74 T 22-04-2016 AMK43_RS08205 52333e15d4687951850c737d788380f1 249 PANTHER PTHR36111:SF2 1 89 1.6E-74 T 22-04-2016 AMK43_RS10590 ff18789f6f0f6a77d466937a30781785 342 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS10590 ff18789f6f0f6a77d466937a30781785 342 SMART SM00382 34 234 5.2E-18 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS10590 ff18789f6f0f6a77d466937a30781785 342 PANTHER PTHR24220:SF535 7 322 5.7E-160 T 22-04-2016 AMK43_RS10590 ff18789f6f0f6a77d466937a30781785 342 Pfam PF00005 ABC transporter 25 184 1.7E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS10590 ff18789f6f0f6a77d466937a30781785 342 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 320 8.6E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK43_RS10590 ff18789f6f0f6a77d466937a30781785 342 Gene3D G3DSA:3.40.50.300 4 258 6.8E-78 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10590 ff18789f6f0f6a77d466937a30781785 342 PANTHER PTHR24220 7 322 5.7E-160 T 22-04-2016 AMK43_RS10590 ff18789f6f0f6a77d466937a30781785 342 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 299 1.4E-13 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK43_RS10590 ff18789f6f0f6a77d466937a30781785 342 SUPERFAMILY SSF52540 5 255 1.11E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 Gene3D G3DSA:3.30.390.30 333 453 1.1E-36 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 Gene3D G3DSA:3.50.50.60 140 331 4.2E-55 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PIRSF PIRSF000350 1 453 2.7E-99 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 Gene3D G3DSA:3.50.50.60 2 139 1.1E-26 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PANTHER PTHR22912 1 456 1.0E-200 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 22-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PANTHER PTHR22912:SF145 1 456 1.0E-200 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 SUPERFAMILY SSF55424 340 453 2.41E-31 T 22-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 1.9E-26 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 1.9E-26 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 288 310 1.9E-26 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 275 1.9E-26 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.9E-26 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.7E-51 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 427 447 1.7E-51 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 303 310 1.7E-51 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 1.7E-51 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.7E-51 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 1.7E-51 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 340 361 1.7E-51 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 260 274 1.7E-51 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 1.7E-51 T 22-04-2016 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 SUPERFAMILY SSF51905 1 316 1.01E-50 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 312 4.1E-61 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS02220 0721adcd5a73df3df82cd01de1faa80c 457 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 344 450 2.8E-26 T 22-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 AMK43_RS07980 b747a3a4c61a65daefe545741166e38c 261 PANTHER PTHR24220 6 260 1.8E-88 T 22-04-2016 AMK43_RS07980 b747a3a4c61a65daefe545741166e38c 261 PANTHER PTHR24220:SF383 6 260 1.8E-88 T 22-04-2016 AMK43_RS07980 b747a3a4c61a65daefe545741166e38c 261 SUPERFAMILY SSF52540 3 236 1.77E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07980 b747a3a4c61a65daefe545741166e38c 261 Pfam PF00005 ABC transporter 20 172 3.0E-28 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS07980 b747a3a4c61a65daefe545741166e38c 261 Gene3D G3DSA:3.40.50.300 2 244 5.9E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07980 b747a3a4c61a65daefe545741166e38c 261 SMART SM00382 29 223 1.8E-7 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS07485 2cffa868ebdee10ba2e58d4536b63091 162 SUPERFAMILY SSF55826 3 161 7.72E-39 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK43_RS07485 2cffa868ebdee10ba2e58d4536b63091 162 PANTHER PTHR31423:SF4 11 162 1.2E-30 T 22-04-2016 AMK43_RS07485 2cffa868ebdee10ba2e58d4536b63091 162 Pfam PF04073 Aminoacyl-tRNA editing domain 23 148 4.5E-22 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK43_RS07485 2cffa868ebdee10ba2e58d4536b63091 162 Gene3D G3DSA:3.90.960.10 5 161 2.5E-51 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK43_RS07485 2cffa868ebdee10ba2e58d4536b63091 162 PANTHER PTHR31423 11 162 1.2E-30 T 22-04-2016 AMK43_RS02495 e075fdfbfd5edf4d7cdc6c9efa7181f3 412 PANTHER PTHR11476:SF9 1 411 4.0E-178 T 22-04-2016 AMK43_RS02495 e075fdfbfd5edf4d7cdc6c9efa7181f3 412 Gene3D G3DSA:3.30.930.10 218 316 6.2E-89 T 22-04-2016 AMK43_RS02495 e075fdfbfd5edf4d7cdc6c9efa7181f3 412 Gene3D G3DSA:3.30.930.10 2 182 6.2E-89 T 22-04-2016 AMK43_RS02495 e075fdfbfd5edf4d7cdc6c9efa7181f3 412 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 412 30.591 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 AMK43_RS02495 e075fdfbfd5edf4d7cdc6c9efa7181f3 412 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 402 1.9E-143 T 22-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 AMK43_RS02495 e075fdfbfd5edf4d7cdc6c9efa7181f3 412 SUPERFAMILY SSF52954 325 411 4.38E-21 T 22-04-2016 IPR004154 Anticodon-binding AMK43_RS02495 e075fdfbfd5edf4d7cdc6c9efa7181f3 412 Pfam PF03129 Anticodon binding domain 325 411 1.1E-15 T 22-04-2016 IPR004154 Anticodon-binding AMK43_RS02495 e075fdfbfd5edf4d7cdc6c9efa7181f3 412 Pfam PF13393 Histidyl-tRNA synthetase 7 309 4.7E-41 T 22-04-2016 AMK43_RS02495 e075fdfbfd5edf4d7cdc6c9efa7181f3 412 Gene3D G3DSA:3.40.50.800 324 411 6.2E-25 T 22-04-2016 IPR004154 Anticodon-binding AMK43_RS02495 e075fdfbfd5edf4d7cdc6c9efa7181f3 412 SUPERFAMILY SSF55681 2 313 1.1E-94 T 22-04-2016 AMK43_RS02495 e075fdfbfd5edf4d7cdc6c9efa7181f3 412 PIRSF PIRSF001549 1 412 3.9E-119 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMK43_RS02495 e075fdfbfd5edf4d7cdc6c9efa7181f3 412 PANTHER PTHR11476 1 411 4.0E-178 T 22-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 ProSitePatterns PS00902 Glutamate 5-kinase signature. 218 235 - T 22-04-2016 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 PIRSF PIRSF000729 11 379 2.6E-137 T 22-04-2016 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 Pfam PF01472 PUA domain 290 361 2.1E-22 T 22-04-2016 IPR002478 PUA domain GO:0003723 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 PANTHER PTHR11063:SF12 6 380 1.7E-123 T 22-04-2016 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 SUPERFAMILY SSF53633 17 268 1.57E-71 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 SMART SM00359 288 370 5.8E-20 T 22-04-2016 IPR002478 PUA domain GO:0003723 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 PANTHER PTHR11063 6 380 1.7E-123 T 22-04-2016 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 Gene3D G3DSA:2.30.130.10 287 376 1.8E-25 T 22-04-2016 IPR015947 PUA-like domain AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 TIGRFAM TIGR01027 proB: glutamate 5-kinase 16 377 8.1E-138 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 PRINTS PR00474 Glutamate 5-kinase family signature 127 148 1.5E-51 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 PRINTS PR00474 Glutamate 5-kinase family signature 220 240 1.5E-51 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 PRINTS PR00474 Glutamate 5-kinase family signature 87 115 1.5E-51 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 PRINTS PR00474 Glutamate 5-kinase family signature 159 186 1.5E-51 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 PRINTS PR00474 Glutamate 5-kinase family signature 53 67 1.5E-51 T 22-04-2016 IPR001057 Glutamate/acetylglutamate kinase GO:0006561 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 SUPERFAMILY SSF88697 288 377 9.45E-27 T 22-04-2016 IPR015947 PUA-like domain AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 Gene3D G3DSA:3.40.1160.10 12 272 3.3E-60 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 Hamap MF_00456 Glutamate 5-kinase [proB]. 16 269 36.975 T 22-04-2016 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|UniPathway: UPA00098 AMK43_RS08705 d2a7cfc95d89a7fedd1c8861157c7cfe 381 Pfam PF00696 Amino acid kinase family 17 246 3.5E-43 T 22-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 AMK43_RS03055 4c5569645a35e3eb49ea298f975e3313 263 PANTHER PTHR30193:SF10 1 263 6.1E-90 T 22-04-2016 AMK43_RS03055 4c5569645a35e3eb49ea298f975e3313 263 Gene3D G3DSA:1.10.3720.10 2 261 9.5E-43 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS03055 4c5569645a35e3eb49ea298f975e3313 263 SUPERFAMILY SSF161098 3 257 7.06E-47 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS03055 4c5569645a35e3eb49ea298f975e3313 263 PANTHER PTHR30193 1 263 6.1E-90 T 22-04-2016 AMK43_RS03055 4c5569645a35e3eb49ea298f975e3313 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 253 2.7E-13 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS01005 6e70e35c59da6ea3448872e2a6d69174 358 PANTHER PTHR11695 12 351 6.7E-88 T 22-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 AMK43_RS01005 6e70e35c59da6ea3448872e2a6d69174 358 Gene3D G3DSA:3.40.50.150 197 274 9.0E-6 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS01005 6e70e35c59da6ea3448872e2a6d69174 358 SUPERFAMILY SSF50129 1 181 4.88E-46 T 22-04-2016 IPR011032 GroES-like AMK43_RS01005 6e70e35c59da6ea3448872e2a6d69174 358 SUPERFAMILY SSF51735 140 312 3.21E-35 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS01005 6e70e35c59da6ea3448872e2a6d69174 358 Gene3D G3DSA:3.90.180.10 1 196 3.5E-66 T 22-04-2016 IPR011032 GroES-like AMK43_RS01005 6e70e35c59da6ea3448872e2a6d69174 358 Pfam PF00107 Zinc-binding dehydrogenase 177 268 6.1E-18 T 22-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 AMK43_RS01005 6e70e35c59da6ea3448872e2a6d69174 358 SMART SM00829 10 345 0.005 T 22-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 AMK43_RS01005 6e70e35c59da6ea3448872e2a6d69174 358 PANTHER PTHR11695:SF429 12 351 6.7E-88 T 22-04-2016 AMK43_RS01005 6e70e35c59da6ea3448872e2a6d69174 358 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 22-04-2016 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 AMK43_RS01005 6e70e35c59da6ea3448872e2a6d69174 358 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 128 3.5E-14 T 22-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 AMK43_RS06940 a45c397e21415c70854d0e9efc9bc01a 307 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 2.0E-95 T 22-04-2016 AMK43_RS06940 a45c397e21415c70854d0e9efc9bc01a 307 SUPERFAMILY SSF52317 17 297 2.72E-102 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS06940 a45c397e21415c70854d0e9efc9bc01a 307 PANTHER PTHR20919:SF0 2 307 9.0E-145 T 22-04-2016 AMK43_RS06940 a45c397e21415c70854d0e9efc9bc01a 307 PIRSF PIRSF000450 1 307 2.5E-147 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK43_RS06940 a45c397e21415c70854d0e9efc9bc01a 307 PANTHER PTHR20919 2 307 9.0E-145 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK43_RS06940 a45c397e21415c70854d0e9efc9bc01a 307 Gene3D G3DSA:3.40.50.880 34 300 1.1E-120 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS06940 a45c397e21415c70854d0e9efc9bc01a 307 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 8.5E-136 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK43_RS06940 a45c397e21415c70854d0e9efc9bc01a 307 Pfam PF04204 Homoserine O-succinyltransferase 2 299 4.9E-136 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK43_RS06940 a45c397e21415c70854d0e9efc9bc01a 307 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 54.004 T 22-04-2016 IPR005697 Homoserine O-succinyltransferase GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46|UniPathway: UPA00051 AMK43_RS05625 47c57575f1c6b67873373fccda624159 385 Pfam PF00266 Aminotransferase class-V 2 372 8.4E-89 T 22-04-2016 IPR000192 Aminotransferase class V domain AMK43_RS05625 47c57575f1c6b67873373fccda624159 385 Gene3D G3DSA:3.90.1150.10 255 381 1.6E-19 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS05625 47c57575f1c6b67873373fccda624159 385 PANTHER PTHR11601 1 383 2.8E-119 T 22-04-2016 AMK43_RS05625 47c57575f1c6b67873373fccda624159 385 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 2 381 1.8E-140 T 22-04-2016 IPR010969 Cysteine desulfurase-related, unknown function AMK43_RS05625 47c57575f1c6b67873373fccda624159 385 PIRSF PIRSF005572 1 385 1.2E-52 T 22-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 AMK43_RS05625 47c57575f1c6b67873373fccda624159 385 Gene3D G3DSA:3.40.640.10 14 254 1.4E-72 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS05625 47c57575f1c6b67873373fccda624159 385 PANTHER PTHR11601:SF43 1 383 2.8E-119 T 22-04-2016 AMK43_RS05625 47c57575f1c6b67873373fccda624159 385 SUPERFAMILY SSF53383 1 383 3.06E-95 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS05625 47c57575f1c6b67873373fccda624159 385 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 190 210 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMK43_RS07930 e2c2efb13ee99ac45111f1a012d20390 138 PANTHER PTHR33317 2 135 3.1E-33 T 22-04-2016 AMK43_RS07930 e2c2efb13ee99ac45111f1a012d20390 138 Pfam PF03652 Holliday junction resolvase 3 135 1.8E-40 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMK43_RS07930 e2c2efb13ee99ac45111f1a012d20390 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 5 135 3.4E-29 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMK43_RS07930 e2c2efb13ee99ac45111f1a012d20390 138 Gene3D G3DSA:3.30.420.140 2 137 5.8E-42 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 AMK43_RS07930 e2c2efb13ee99ac45111f1a012d20390 138 SUPERFAMILY SSF53098 2 137 6.37E-33 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS07930 e2c2efb13ee99ac45111f1a012d20390 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 2 138 22.18 T 22-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 AMK43_RS07930 e2c2efb13ee99ac45111f1a012d20390 138 PANTHER PTHR33317:SF1 2 135 3.1E-33 T 22-04-2016 AMK43_RS07930 e2c2efb13ee99ac45111f1a012d20390 138 SMART SM00732 2 102 5.7E-22 T 22-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 AMK43_RS01135 273bfa2de9cebd7a58bb14e418203fe9 289 PANTHER PTHR21091:SF31 125 142 1.7E-26 T 22-04-2016 AMK43_RS01135 273bfa2de9cebd7a58bb14e418203fe9 289 PANTHER PTHR21091:SF31 163 287 1.7E-26 T 22-04-2016 AMK43_RS01135 273bfa2de9cebd7a58bb14e418203fe9 289 PANTHER PTHR21091 125 142 1.7E-26 T 22-04-2016 AMK43_RS01135 273bfa2de9cebd7a58bb14e418203fe9 289 PANTHER PTHR21091 163 287 1.7E-26 T 22-04-2016 AMK43_RS01135 273bfa2de9cebd7a58bb14e418203fe9 289 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 14 285 3.7E-93 T 22-04-2016 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMK43_RS01135 273bfa2de9cebd7a58bb14e418203fe9 289 Gene3D G3DSA:3.20.20.220 1 286 2.2E-97 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like AMK43_RS01135 273bfa2de9cebd7a58bb14e418203fe9 289 SUPERFAMILY SSF51730 1 286 1.39E-89 T 22-04-2016 IPR029041 FAD-linked oxidoreductase-like AMK43_RS01135 273bfa2de9cebd7a58bb14e418203fe9 289 Pfam PF02219 Methylenetetrahydrofolate reductase 2 285 8.0E-81 T 22-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 PANTHER PTHR11102:SF11 114 188 1.6E-32 T 22-04-2016 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 PANTHER PTHR11102:SF11 58 85 1.6E-32 T 22-04-2016 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 PANTHER PTHR11102:SF11 439 573 1.6E-32 T 22-04-2016 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 PANTHER PTHR11102:SF11 316 410 1.6E-32 T 22-04-2016 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SUPERFAMILY SSF81901 296 459 3.75E-23 T 22-04-2016 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SUPERFAMILY SSF81901 438 562 1.7E-21 T 22-04-2016 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 Gene3D G3DSA:1.25.40.10 88 226 1.6E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 Gene3D G3DSA:1.25.40.10 295 349 1.6E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 Gene3D G3DSA:1.25.40.10 381 572 2.1E-39 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SMART SM00671 364 395 3.4 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SMART SM00671 460 491 58.0 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SMART SM00671 136 167 0.11 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SMART SM00671 332 363 0.0035 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SMART SM00671 396 427 190.0 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SMART SM00671 527 559 6.7 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SMART SM00671 300 331 37.0 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SMART SM00671 492 526 6.8E-5 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 Pfam PF13181 Tetratricopeptide repeat 333 359 5.7E-4 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SUPERFAMILY SSF81901 106 239 1.16E-14 T 22-04-2016 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 PANTHER PTHR11102 114 188 1.6E-32 T 22-04-2016 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 PANTHER PTHR11102 58 85 1.6E-32 T 22-04-2016 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 PANTHER PTHR11102 439 573 1.6E-32 T 22-04-2016 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 PANTHER PTHR11102 316 410 1.6E-32 T 22-04-2016 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 Gene3D G3DSA:1.25.40.10 350 380 2.0E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 Pfam PF07719 Tetratricopeptide repeat 367 394 2.2E-5 T 22-04-2016 IPR013105 Tetratricopeptide repeat 2 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SMART SM00028 332 365 0.13 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SMART SM00028 136 169 3.5 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SMART SM00028 367 397 12.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 SMART SM00028 492 528 33.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 Pfam PF08238 Sel1 repeat 527 558 0.14 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 Pfam PF08238 Sel1 repeat 493 525 8.7E-6 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 Pfam PF08238 Sel1 repeat 472 491 0.1 T 22-04-2016 IPR006597 Sel1-like repeat AMK43_RS09215 cb6fc608cb56b351b16f9648410100bc 573 Pfam PF13432 Tetratricopeptide repeat 109 161 1.6E-4 T 22-04-2016 AMK43_RS00380 ff180c18c751dc442479aa77466fe39f 156 Gene3D G3DSA:1.10.455.10 7 156 3.1E-61 T 22-04-2016 IPR023798 Ribosomal protein S7 domain AMK43_RS00380 ff180c18c751dc442479aa77466fe39f 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 22-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 AMK43_RS00380 ff180c18c751dc442479aa77466fe39f 156 Pfam PF00177 Ribosomal protein S7p/S5e 2 149 1.5E-61 T 22-04-2016 IPR023798 Ribosomal protein S7 domain AMK43_RS00380 ff180c18c751dc442479aa77466fe39f 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 6.1E-66 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMK43_RS00380 ff180c18c751dc442479aa77466fe39f 156 PANTHER PTHR11205 1 156 6.7E-76 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 AMK43_RS00380 ff180c18c751dc442479aa77466fe39f 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.082 T 22-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 AMK43_RS00380 ff180c18c751dc442479aa77466fe39f 156 PIRSF PIRSF002122 2 156 2.8E-56 T 22-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 AMK43_RS00380 ff180c18c751dc442479aa77466fe39f 156 SUPERFAMILY SSF47973 3 152 1.06E-56 T 22-04-2016 IPR023798 Ribosomal protein S7 domain AMK43_RS02290 dda1c1c7682d7f3ee193e11c73360ba3 2003 Pfam PF03797 Autotransporter beta-domain 1721 1989 3.3E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS02290 dda1c1c7682d7f3ee193e11c73360ba3 2003 SUPERFAMILY SSF103515 1687 2000 1.57E-21 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS02290 dda1c1c7682d7f3ee193e11c73360ba3 2003 SMART SM00869 1720 1995 3.0E-10 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS02290 dda1c1c7682d7f3ee193e11c73360ba3 2003 Gene3D G3DSA:2.40.128.130 1684 2000 1.3E-27 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS06235 2391bdb4bc6536fbb665676614d5c1ae 732 Gene3D G3DSA:1.10.10.160 111 187 4.4E-15 T 22-04-2016 IPR013986 DExx box DNA helicase domain AMK43_RS06235 2391bdb4bc6536fbb665676614d5c1ae 732 PANTHER PTHR11070:SF7 2 652 5.2E-197 T 22-04-2016 AMK43_RS06235 2391bdb4bc6536fbb665676614d5c1ae 732 PANTHER PTHR11070 2 652 5.2E-197 T 22-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 AMK43_RS06235 2391bdb4bc6536fbb665676614d5c1ae 732 Gene3D G3DSA:3.40.50.300 188 284 1.1E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06235 2391bdb4bc6536fbb665676614d5c1ae 732 Gene3D G3DSA:3.40.50.300 3 107 1.1E-69 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06235 2391bdb4bc6536fbb665676614d5c1ae 732 Gene3D G3DSA:3.40.50.300 285 386 1.2E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06235 2391bdb4bc6536fbb665676614d5c1ae 732 Gene3D G3DSA:3.40.50.300 544 635 1.2E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06235 2391bdb4bc6536fbb665676614d5c1ae 732 SUPERFAMILY SSF52540 3 631 2.92E-164 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06235 2391bdb4bc6536fbb665676614d5c1ae 732 Pfam PF13361 UvrD-like helicase C-terminal domain 277 607 8.1E-75 T 22-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 AMK43_RS06235 2391bdb4bc6536fbb665676614d5c1ae 732 Gene3D G3DSA:1.10.486.10 387 532 3.0E-41 T 22-04-2016 AMK43_RS06235 2391bdb4bc6536fbb665676614d5c1ae 732 Pfam PF00580 UvrD/REP helicase N-terminal domain 7 271 5.4E-76 T 22-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 AMK43_RS03180 6cd8c70a288bf9860eef9e262ab8a37c 386 PANTHER PTHR13504:SF32 43 385 4.0E-71 T 22-04-2016 AMK43_RS03180 6cd8c70a288bf9860eef9e262ab8a37c 386 Pfam PF02661 Fic/DOC family 133 238 1.3E-19 T 22-04-2016 IPR003812 Fido domain AMK43_RS03180 6cd8c70a288bf9860eef9e262ab8a37c 386 SUPERFAMILY SSF46785 316 377 1.94E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03180 6cd8c70a288bf9860eef9e262ab8a37c 386 PIRSF PIRSF038925 19 386 4.8E-106 T 22-04-2016 IPR026287 Adenosine monophosphate-protein transferase AMK43_RS03180 6cd8c70a288bf9860eef9e262ab8a37c 386 Pfam PF13412 Winged helix-turn-helix DNA-binding 318 363 1.7E-6 T 22-04-2016 AMK43_RS03180 6cd8c70a288bf9860eef9e262ab8a37c 386 Gene3D G3DSA:1.10.10.10 307 375 3.4E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03180 6cd8c70a288bf9860eef9e262ab8a37c 386 Gene3D G3DSA:1.10.3290.10 46 301 6.0E-62 T 22-04-2016 IPR003812 Fido domain AMK43_RS03180 6cd8c70a288bf9860eef9e262ab8a37c 386 SUPERFAMILY SSF140931 109 305 4.71E-46 T 22-04-2016 IPR003812 Fido domain AMK43_RS03180 6cd8c70a288bf9860eef9e262ab8a37c 386 Pfam PF13784 Fic/DOC family N-terminal 46 124 1.7E-18 T 22-04-2016 IPR025758 Fic/DOC N-terminal AMK43_RS03180 6cd8c70a288bf9860eef9e262ab8a37c 386 PANTHER PTHR13504 43 385 4.0E-71 T 22-04-2016 AMK43_RS04555 7a717d31b7aea288e5961ed3c3e1c7da 211 SUPERFAMILY SSF53098 17 202 1.0E-61 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS04555 7a717d31b7aea288e5961ed3c3e1c7da 211 PANTHER PTHR10954:SF7 1 211 8.5E-63 T 22-04-2016 AMK43_RS04555 7a717d31b7aea288e5961ed3c3e1c7da 211 PANTHER PTHR10954 1 211 8.5E-63 T 22-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 AMK43_RS04555 7a717d31b7aea288e5961ed3c3e1c7da 211 Gene3D G3DSA:3.30.420.10 19 161 2.0E-45 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS04555 7a717d31b7aea288e5961ed3c3e1c7da 211 Hamap MF_00052_B Ribonuclease HII [rnhB]. 18 200 32.109 T 22-04-2016 IPR022898 Ribonuclease HII GO:0004523 AMK43_RS04555 7a717d31b7aea288e5961ed3c3e1c7da 211 Pfam PF01351 Ribonuclease HII 20 198 7.9E-41 T 22-04-2016 IPR024567 Ribonuclease HII/HIII domain AMK43_RS05900 0eb56f89052d10c5cb84c0e271a86bfe 39 Gene3D G3DSA:1.10.260.40 2 32 6.6E-4 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS05900 0eb56f89052d10c5cb84c0e271a86bfe 39 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 31 6.3E-5 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 282 300 7.0E-28 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 88 104 7.0E-28 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 327 343 7.0E-28 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 421 436 7.0E-28 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 157 174 7.0E-28 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 121 141 7.0E-28 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 PANTHER PTHR28570:SF2 3 456 5.7E-174 T 22-04-2016 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 28 454 8.5E-96 T 22-04-2016 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 Gene3D G3DSA:2.30.250.10 99 236 1.9E-44 T 22-04-2016 IPR023358 Peptidase M18, domain 2 GO:0004177 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 PANTHER PTHR28570 3 456 5.7E-174 T 22-04-2016 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 SUPERFAMILY SSF53187 5 99 4.71E-92 T 22-04-2016 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 SUPERFAMILY SSF53187 233 455 4.71E-92 T 22-04-2016 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 SUPERFAMILY SSF101821 100 233 5.13E-32 T 22-04-2016 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 Gene3D G3DSA:3.40.630.10 242 455 2.5E-75 T 22-04-2016 AMK43_RS10695 0ced8ba4720b4a3d8719c59b711c8a02 456 Gene3D G3DSA:3.40.630.10 20 98 2.5E-75 T 22-04-2016 AMK43_RS03290 0f258adc7919778eae843f015602a7e1 269 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 254 4.8E-72 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMK43_RS03290 0f258adc7919778eae843f015602a7e1 269 Gene3D G3DSA:3.40.1390.30 1 110 2.1E-45 T 22-04-2016 AMK43_RS03290 0f258adc7919778eae843f015602a7e1 269 PANTHER PTHR13799 1 248 3.5E-73 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMK43_RS03290 0f258adc7919778eae843f015602a7e1 269 SUPERFAMILY SSF102705 1 246 3.14E-76 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMK43_RS03290 0f258adc7919778eae843f015602a7e1 269 PANTHER PTHR13799:SF13 1 248 3.5E-73 T 22-04-2016 AMK43_RS03290 0f258adc7919778eae843f015602a7e1 269 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 244 1.6E-58 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMK43_RS03290 0f258adc7919778eae843f015602a7e1 269 Gene3D G3DSA:3.40.1390.30 111 233 1.6E-22 T 22-04-2016 AMK43_RS07225 7a445494c9b184c4737af2986d383d8e 236 PANTHER PTHR21234 3 236 2.1E-70 T 22-04-2016 IPR018017 Nucleoside phosphorylase AMK43_RS07225 7a445494c9b184c4737af2986d383d8e 236 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 22-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AMK43_RS07225 7a445494c9b184c4737af2986d383d8e 236 Gene3D G3DSA:3.40.50.1580 9 234 1.8E-79 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK43_RS07225 7a445494c9b184c4737af2986d383d8e 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 4.4E-98 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AMK43_RS07225 7a445494c9b184c4737af2986d383d8e 236 SUPERFAMILY SSF53167 3 233 1.44E-90 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK43_RS07225 7a445494c9b184c4737af2986d383d8e 236 Pfam PF01048 Phosphorylase superfamily 17 216 2.5E-40 T 22-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 AMK43_RS07225 7a445494c9b184c4737af2986d383d8e 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 46.963 T 22-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 AMK43_RS07225 7a445494c9b184c4737af2986d383d8e 236 PANTHER PTHR21234:SF8 3 236 2.1E-70 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 Gene3D G3DSA:3.40.1030.10 403 543 6.1E-72 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 Gene3D G3DSA:3.40.1030.10 285 364 6.1E-72 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 218 545 1.8E-111 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 PANTHER PTHR11922 231 245 7.7E-95 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 PANTHER PTHR11922 279 545 7.7E-95 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 SUPERFAMILY SSF52418 283 545 2.49E-80 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 SUPERFAMILY SSF52317 1 190 1.4E-49 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 PRINTS PR00097 Anthranilate synthase component II signature 121 133 7.2E-29 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 PRINTS PR00097 Anthranilate synthase component II signature 2 16 7.2E-29 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 PRINTS PR00097 Anthranilate synthase component II signature 74 85 7.2E-29 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 PRINTS PR00097 Anthranilate synthase component II signature 99 107 7.2E-29 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 PRINTS PR00097 Anthranilate synthase component II signature 48 57 7.2E-29 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 PRINTS PR00097 Anthranilate synthase component II signature 166 179 7.2E-29 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 Pfam PF00117 Glutamine amidotransferase class-I 3 187 2.7E-45 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 SUPERFAMILY SSF47648 216 277 5.63E-5 T 22-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 PANTHER PTHR11922:SF5 231 245 7.7E-95 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 PANTHER PTHR11922:SF5 279 545 7.7E-95 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 Pfam PF00591 Glycosyl transferase family, a/b domain 285 535 2.1E-79 T 22-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 216 546 30.925 T 22-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 1.5E-11 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.5E-11 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 1.5E-11 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 Gene3D G3DSA:3.40.50.880 1 188 6.3E-59 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 Gene3D G3DSA:1.20.970.10 365 395 2.5E-23 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 Gene3D G3DSA:1.20.970.10 207 276 2.5E-23 T 22-04-2016 AMK43_RS01660 838ac8ca799040c7bd5142431c3dca88 547 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 188 1.4E-56 T 22-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK43_RS00585 ea9a70c377627906e3dd840c97435b1d 99 PANTHER PTHR15004 1 94 1.8E-28 T 22-04-2016 AMK43_RS00585 ea9a70c377627906e3dd840c97435b1d 99 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 1 94 24.106 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMK43_RS00585 ea9a70c377627906e3dd840c97435b1d 99 SUPERFAMILY SSF141000 1 92 7.06E-29 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMK43_RS00585 ea9a70c377627906e3dd840c97435b1d 99 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 2 93 4.9E-29 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMK43_RS00585 ea9a70c377627906e3dd840c97435b1d 99 PANTHER PTHR15004:SF0 1 94 1.8E-28 T 22-04-2016 AMK43_RS00585 ea9a70c377627906e3dd840c97435b1d 99 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 18 89 3.5E-20 T 22-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 AMK43_RS08505 a0c91c3a8bd74f8fffe03d873945e87a 189 Pfam PF01025 GrpE 24 188 3.1E-48 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK43_RS08505 a0c91c3a8bd74f8fffe03d873945e87a 189 Hamap MF_01151 Protein GrpE [grpE]. 2 188 18.625 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK43_RS08505 a0c91c3a8bd74f8fffe03d873945e87a 189 PANTHER PTHR21237 6 189 1.1E-42 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK43_RS08505 a0c91c3a8bd74f8fffe03d873945e87a 189 SUPERFAMILY SSF58014 36 131 1.31E-21 T 22-04-2016 AMK43_RS08505 a0c91c3a8bd74f8fffe03d873945e87a 189 SUPERFAMILY SSF51064 138 188 1.31E-16 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 AMK43_RS08505 a0c91c3a8bd74f8fffe03d873945e87a 189 PRINTS PR00773 GrpE protein signature 140 155 8.8E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK43_RS08505 a0c91c3a8bd74f8fffe03d873945e87a 189 PRINTS PR00773 GrpE protein signature 167 186 8.8E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK43_RS08505 a0c91c3a8bd74f8fffe03d873945e87a 189 PRINTS PR00773 GrpE protein signature 85 100 8.8E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK43_RS08505 a0c91c3a8bd74f8fffe03d873945e87a 189 PRINTS PR00773 GrpE protein signature 57 73 8.8E-22 T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK43_RS08505 a0c91c3a8bd74f8fffe03d873945e87a 189 ProSitePatterns PS01071 grpE protein signature. 143 186 - T 22-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 AMK43_RS08505 a0c91c3a8bd74f8fffe03d873945e87a 189 Gene3D G3DSA:3.90.20.20 31 128 2.8E-25 T 22-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil AMK43_RS08505 a0c91c3a8bd74f8fffe03d873945e87a 189 Gene3D G3DSA:2.30.22.10 131 188 4.1E-23 T 22-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 AMK43_RS03190 e5cf1bd565771fe8affa06e15c8540c5 395 Gene3D G3DSA:3.40.50.620 178 339 4.5E-48 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS03190 e5cf1bd565771fe8affa06e15c8540c5 395 PANTHER PTHR14911 16 385 1.3E-118 T 22-04-2016 AMK43_RS03190 e5cf1bd565771fe8affa06e15c8540c5 395 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 395 123.05 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 AMK43_RS03190 e5cf1bd565771fe8affa06e15c8540c5 395 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 15 381 2.9E-105 T 22-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 AMK43_RS03190 e5cf1bd565771fe8affa06e15c8540c5 395 SUPERFAMILY SSF52402 179 376 3.97E-42 T 22-04-2016 AMK43_RS03190 e5cf1bd565771fe8affa06e15c8540c5 395 Pfam PF02926 THUMP domain 62 169 2.4E-15 T 22-04-2016 IPR004114 THUMP domain GO:0003723 AMK43_RS03190 e5cf1bd565771fe8affa06e15c8540c5 395 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 180 375 3.9E-66 T 22-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 AMK43_RS03190 e5cf1bd565771fe8affa06e15c8540c5 395 PANTHER PTHR14911:SF16 16 385 1.3E-118 T 22-04-2016 AMK43_RS03190 e5cf1bd565771fe8affa06e15c8540c5 395 SMART SM00981 79 170 1.0E-16 T 22-04-2016 IPR004114 THUMP domain GO:0003723 AMK43_RS03190 e5cf1bd565771fe8affa06e15c8540c5 395 SUPERFAMILY SSF143437 14 178 1.41E-36 T 22-04-2016 AMK43_RS00810 2da8916487bd841e0604e5c9894f6d25 235 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 24 231 6.4E-80 T 22-04-2016 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 UniPathway: UPA00148 AMK43_RS00810 2da8916487bd841e0604e5c9894f6d25 235 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 24 233 26.986 T 22-04-2016 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 UniPathway: UPA00148 AMK43_RS00810 2da8916487bd841e0604e5c9894f6d25 235 PANTHER PTHR34229 25 228 1.1E-100 T 22-04-2016 AMK43_RS00810 2da8916487bd841e0604e5c9894f6d25 235 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 25 228 3.0E-50 T 22-04-2016 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 UniPathway: UPA00148 AMK43_RS00810 2da8916487bd841e0604e5c9894f6d25 235 PANTHER PTHR34229:SF2 25 228 1.1E-100 T 22-04-2016 AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 258 279 4.2E-5 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 331 352 0.033 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 500 511 0.65 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 523 544 0.19 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 379 398 0.0034 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 403 419 0.33 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 548 566 0.32 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 235 254 3.1E-4 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 428 448 0.0062 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 282 303 0.34 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 77 97 0.0019 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 596 615 0.012 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 162 183 9.0E-4 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 356 376 0.18 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Pfam PF07661 MORN repeat variant 451 471 0.48 T 22-04-2016 IPR011652 MORN variant AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 SUPERFAMILY SSF82185 138 231 2.62E-18 T 22-04-2016 AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 SUPERFAMILY SSF82185 326 441 2.62E-25 T 22-04-2016 AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 PANTHER PTHR33706 140 596 6.2E-42 T 22-04-2016 AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 PANTHER PTHR33706:SF1 140 596 6.2E-42 T 22-04-2016 AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 SUPERFAMILY SSF82185 54 141 1.31E-10 T 22-04-2016 AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Gene3D G3DSA:2.20.110.10 53 143 5.5E-7 T 22-04-2016 AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Gene3D G3DSA:2.20.110.10 493 619 1.4E-17 T 22-04-2016 AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Gene3D G3DSA:2.20.110.10 144 260 1.3E-17 T 22-04-2016 AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 Gene3D G3DSA:2.20.110.10 327 454 4.8E-23 T 22-04-2016 AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 SUPERFAMILY SSF82185 491 611 3.92E-25 T 22-04-2016 AMK43_RS02480 1ec239e91cd8d0e1d833ed077115625c 620 SUPERFAMILY SSF82185 228 319 6.02E-21 T 22-04-2016 AMK43_RS10895 213c78ed901636b80fe24329f9d41ac3 730 SUPERFAMILY SSF51998 211 296 1.62E-129 T 22-04-2016 AMK43_RS10895 213c78ed901636b80fe24329f9d41ac3 730 SUPERFAMILY SSF51998 338 707 1.62E-129 T 22-04-2016 AMK43_RS10895 213c78ed901636b80fe24329f9d41ac3 730 SUPERFAMILY SSF51998 26 165 1.62E-129 T 22-04-2016 AMK43_RS10895 213c78ed901636b80fe24329f9d41ac3 730 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 333 727 1.5E-113 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AMK43_RS10895 213c78ed901636b80fe24329f9d41ac3 730 PANTHER PTHR21075 452 730 1.5E-173 T 22-04-2016 AMK43_RS10895 213c78ed901636b80fe24329f9d41ac3 730 PANTHER PTHR21075 204 296 1.5E-173 T 22-04-2016 AMK43_RS10895 213c78ed901636b80fe24329f9d41ac3 730 PANTHER PTHR21075 7 160 1.5E-173 T 22-04-2016 AMK43_RS10895 213c78ed901636b80fe24329f9d41ac3 730 PANTHER PTHR21075 338 423 1.5E-173 T 22-04-2016 AMK43_RS10895 213c78ed901636b80fe24329f9d41ac3 730 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 25 727 7.6E-199 T 22-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 AMK43_RS10895 213c78ed901636b80fe24329f9d41ac3 730 Gene3D G3DSA:3.20.70.20 201 296 1.2E-168 T 22-04-2016 AMK43_RS10895 213c78ed901636b80fe24329f9d41ac3 730 Gene3D G3DSA:3.20.70.20 338 707 1.2E-168 T 22-04-2016 AMK43_RS10895 213c78ed901636b80fe24329f9d41ac3 730 Gene3D G3DSA:3.20.70.20 32 156 1.2E-168 T 22-04-2016 AMK43_RS01600 d7c5624b709af37223589b0b36cd2172 119 PIRSF PIRSF004555 12 119 2.0E-23 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK43_RS01600 d7c5624b709af37223589b0b36cd2172 119 Pfam PF02575 YbaB/EbfC DNA-binding family 21 113 1.9E-21 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK43_RS01600 d7c5624b709af37223589b0b36cd2172 119 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 13 111 8.1E-14 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK43_RS01600 d7c5624b709af37223589b0b36cd2172 119 SUPERFAMILY SSF82607 21 118 9.55E-19 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK43_RS01600 d7c5624b709af37223589b0b36cd2172 119 Gene3D G3DSA:3.30.1310.10 12 119 1.7E-23 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK43_RS01600 d7c5624b709af37223589b0b36cd2172 119 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 14 112 15.193 T 22-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family AMK43_RS10925 54e8272808e8a7e93f741be597ed8a78 356 Pfam PF08402 TOBE domain 275 337 1.2E-8 T 22-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 AMK43_RS10925 54e8272808e8a7e93f741be597ed8a78 356 Gene3D G3DSA:3.40.50.300 3 241 1.6E-77 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10925 54e8272808e8a7e93f741be597ed8a78 356 Pfam PF00005 ABC transporter 19 165 1.1E-32 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS10925 54e8272808e8a7e93f741be597ed8a78 356 SUPERFAMILY SSF52540 4 246 1.34E-86 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10925 54e8272808e8a7e93f741be597ed8a78 356 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS10925 54e8272808e8a7e93f741be597ed8a78 356 PANTHER PTHR24220 5 297 4.8E-153 T 22-04-2016 AMK43_RS10925 54e8272808e8a7e93f741be597ed8a78 356 SMART SM00382 28 215 4.1E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS10925 54e8272808e8a7e93f741be597ed8a78 356 SUPERFAMILY SSF50331 241 338 2.11E-13 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK43_RS10925 54e8272808e8a7e93f741be597ed8a78 356 PANTHER PTHR24220:SF151 5 297 4.8E-153 T 22-04-2016 AMK43_RS07410 0479582a830b172c5a73a4221c0a2203 77 PANTHER PTHR38008 22 77 6.5E-13 T 22-04-2016 AMK43_RS07410 0479582a830b172c5a73a4221c0a2203 77 PANTHER PTHR38008:SF2 22 77 6.5E-13 T 22-04-2016 AMK43_RS07410 0479582a830b172c5a73a4221c0a2203 77 Pfam PF03891 Domain of unknown function (DUF333) 25 72 5.4E-22 T 22-04-2016 IPR005590 Protein of unknown function DUF333 AMK43_RS00775 dc9261f01b61a5e5b78ceaf973b73494 215 PANTHER PTHR23029 11 190 1.9E-39 T 22-04-2016 AMK43_RS00775 dc9261f01b61a5e5b78ceaf973b73494 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 15 210 1.0E-42 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK43_RS00775 dc9261f01b61a5e5b78ceaf973b73494 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 17 26 - T 22-04-2016 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 UniPathway: UPA00109 AMK43_RS00775 dc9261f01b61a5e5b78ceaf973b73494 215 SMART SM00855 14 176 7.0E-14 T 22-04-2016 IPR013078 Histidine phosphatase superfamily, clade-1 AMK43_RS00775 dc9261f01b61a5e5b78ceaf973b73494 215 PANTHER PTHR23029:SF1 11 190 1.9E-39 T 22-04-2016 AMK43_RS00775 dc9261f01b61a5e5b78ceaf973b73494 215 Gene3D G3DSA:3.40.50.1240 13 210 2.7E-51 T 22-04-2016 IPR029033 Histidine phosphatase superfamily AMK43_RS00775 dc9261f01b61a5e5b78ceaf973b73494 215 SUPERFAMILY SSF53254 13 209 1.11E-47 T 22-04-2016 IPR029033 Histidine phosphatase superfamily AMK43_RS01050 a076bb7df3e80451e88fa98243c5b441 290 SUPERFAMILY SSF53697 103 283 1.83E-41 T 22-04-2016 AMK43_RS01050 a076bb7df3e80451e88fa98243c5b441 290 Pfam PF01380 SIS domain 135 264 3.2E-21 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK43_RS01050 a076bb7df3e80451e88fa98243c5b441 290 PANTHER PTHR30514 1 290 6.5E-69 T 22-04-2016 AMK43_RS01050 a076bb7df3e80451e88fa98243c5b441 290 SUPERFAMILY SSF46689 6 78 3.58E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS01050 a076bb7df3e80451e88fa98243c5b441 290 PANTHER PTHR30514:SF1 1 290 6.5E-69 T 22-04-2016 AMK43_RS01050 a076bb7df3e80451e88fa98243c5b441 290 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 77 5.2E-23 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AMK43_RS01050 a076bb7df3e80451e88fa98243c5b441 290 Gene3D G3DSA:3.40.50.10490 110 287 7.6E-44 T 22-04-2016 AMK43_RS01050 a076bb7df3e80451e88fa98243c5b441 290 Gene3D G3DSA:1.10.10.10 3 77 2.2E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02875 3edafd7bd89ac818f0ba19d1f09dd351 271 Gene3D G3DSA:3.40.50.300 87 212 3.3E-8 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02875 3edafd7bd89ac818f0ba19d1f09dd351 271 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 29 210 1.3E-10 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK43_RS02875 3edafd7bd89ac818f0ba19d1f09dd351 271 SUPERFAMILY SSF52540 30 212 5.8E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02845 ef43fe2327bae60ecf90100fdd2eb9c2 417 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 6.7E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS02845 ef43fe2327bae60ecf90100fdd2eb9c2 417 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 6.7E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS02845 ef43fe2327bae60ecf90100fdd2eb9c2 417 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 6.7E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS02845 ef43fe2327bae60ecf90100fdd2eb9c2 417 PRINTS PR00173 Glutamate-aspartate symporter signature 357 377 6.7E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS02845 ef43fe2327bae60ecf90100fdd2eb9c2 417 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 6.7E-21 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS02845 ef43fe2327bae60ecf90100fdd2eb9c2 417 Gene3D G3DSA:1.10.3860.10 10 407 4.1E-81 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS02845 ef43fe2327bae60ecf90100fdd2eb9c2 417 PANTHER PTHR11958:SF61 5 408 1.6E-188 T 22-04-2016 AMK43_RS02845 ef43fe2327bae60ecf90100fdd2eb9c2 417 SUPERFAMILY SSF118215 18 402 7.32E-85 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS02845 ef43fe2327bae60ecf90100fdd2eb9c2 417 Pfam PF00375 Sodium:dicarboxylate symporter family 20 402 2.2E-95 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS02845 ef43fe2327bae60ecf90100fdd2eb9c2 417 PANTHER PTHR11958 5 408 1.6E-188 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS09970 535fb6e87dde664c5eb6565c27705c2d 363 SUPERFAMILY SSF160631 211 346 1.44E-10 T 22-04-2016 AMK43_RS09970 535fb6e87dde664c5eb6565c27705c2d 363 Gene3D G3DSA:3.40.1580.10 210 354 2.8E-5 T 22-04-2016 IPR018958 SMI1/KNR4-like domain AMK43_RS09970 535fb6e87dde664c5eb6565c27705c2d 363 SUPERFAMILY SSF160631 7 152 3.53E-8 T 22-04-2016 AMK43_RS08285 d0956963ee6f414a12e47046019dfeb4 162 Pfam PF01930 Domain of unknown function DUF83 5 162 2.8E-50 T 22-04-2016 IPR022765 Dna2/Cas4, domain of unknown function DUF83 AMK43_RS08285 d0956963ee6f414a12e47046019dfeb4 162 PANTHER PTHR37168:SF1 1 162 1.6E-59 T 22-04-2016 AMK43_RS08285 d0956963ee6f414a12e47046019dfeb4 162 TIGRFAM TIGR00372 cas4: CRISPR-associated protein Cas4 3 161 1.6E-22 T 22-04-2016 IPR013343 CRISPR-associated protein Cas4 AMK43_RS08285 d0956963ee6f414a12e47046019dfeb4 162 PANTHER PTHR37168 1 162 1.6E-59 T 22-04-2016 AMK43_RS00780 c289168096ceac4c1f31b3f109bc0df5 262 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 2 260 1.1E-61 T 22-04-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 AMK43_RS00780 c289168096ceac4c1f31b3f109bc0df5 262 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 2 256 7.1E-71 T 22-04-2016 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 AMK43_RS00780 c289168096ceac4c1f31b3f109bc0df5 262 PANTHER PTHR36925 1 262 2.0E-63 T 22-04-2016 AMK43_RS02285 b8d6181e20977e105bc6a252d858fdca 336 ProSitePatterns PS00211 ABC transporters family signature. 224 238 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS02285 b8d6181e20977e105bc6a252d858fdca 336 PANTHER PTHR24220 87 332 5.4E-92 T 22-04-2016 AMK43_RS02285 b8d6181e20977e105bc6a252d858fdca 336 Pfam PF00005 ABC transporter 106 251 8.0E-15 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS02285 b8d6181e20977e105bc6a252d858fdca 336 PANTHER PTHR24220:SF565 87 332 5.4E-92 T 22-04-2016 AMK43_RS02285 b8d6181e20977e105bc6a252d858fdca 336 SUPERFAMILY SSF52540 106 296 3.79E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02285 b8d6181e20977e105bc6a252d858fdca 336 SMART SM00382 110 295 3.9E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS02285 b8d6181e20977e105bc6a252d858fdca 336 Gene3D G3DSA:3.40.50.300 106 302 2.6E-23 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00060 ed6bd3b394d1e7c0e7a7d2cf3ef83de7 152 Pfam PF11259 Protein of unknown function (DUF3060) 84 146 9.8E-16 T 22-04-2016 IPR021417 Protein of unknown function DUF3060 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 Pfam PF13416 Bacterial extracellular solute-binding protein 44 317 6.8E-33 T 22-04-2016 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 2.1E-30 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 211 230 2.1E-30 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 2.1E-30 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 2.1E-30 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 193 2.1E-30 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 256 275 2.1E-30 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 2.1E-30 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 SUPERFAMILY SSF53850 30 349 1.13E-68 T 22-04-2016 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 PIRSF PIRSF019574 1 352 6.8E-81 T 22-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 PANTHER PTHR30222:SF5 1 304 5.3E-74 T 22-04-2016 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 Gene3D G3DSA:3.40.190.10 141 278 9.2E-39 T 22-04-2016 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 PANTHER PTHR30222 1 304 5.3E-74 T 22-04-2016 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 Gene3D G3DSA:3.40.190.10 279 311 1.1E-41 T 22-04-2016 AMK43_RS09420 86eb85c297c72a4c9b8c637fede8bc6b 352 Gene3D G3DSA:3.40.190.10 29 140 1.1E-41 T 22-04-2016 AMK43_RS02095 3831cd769418f6fffe7007fc39c62da4 499 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 1 492 38.28 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 AMK43_RS02095 3831cd769418f6fffe7007fc39c62da4 499 SUPERFAMILY SSF47323 356 488 2.88E-28 T 22-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS02095 3831cd769418f6fffe7007fc39c62da4 499 Pfam PF09190 DALR domain 367 426 4.2E-11 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AMK43_RS02095 3831cd769418f6fffe7007fc39c62da4 499 SMART SM00840 367 434 4.2E-8 T 22-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 AMK43_RS02095 3831cd769418f6fffe7007fc39c62da4 499 Gene3D G3DSA:1.20.120.640 305 417 1.8E-12 T 22-04-2016 AMK43_RS02095 3831cd769418f6fffe7007fc39c62da4 499 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 1.4E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK43_RS02095 3831cd769418f6fffe7007fc39c62da4 499 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 189 207 1.4E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK43_RS02095 3831cd769418f6fffe7007fc39c62da4 499 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 220 241 1.4E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK43_RS02095 3831cd769418f6fffe7007fc39c62da4 499 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 1.4E-30 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK43_RS02095 3831cd769418f6fffe7007fc39c62da4 499 PANTHER PTHR10890 2 488 9.4E-215 T 22-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 AMK43_RS02095 3831cd769418f6fffe7007fc39c62da4 499 Gene3D G3DSA:3.40.50.620 18 303 3.0E-111 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS02095 3831cd769418f6fffe7007fc39c62da4 499 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 14 310 1.9E-131 T 22-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 AMK43_RS02095 3831cd769418f6fffe7007fc39c62da4 499 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 488 3.4E-169 T 22-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 AMK43_RS02095 3831cd769418f6fffe7007fc39c62da4 499 SUPERFAMILY SSF52374 2 311 1.1E-101 T 22-04-2016 AMK43_RS07235 bca631e4be42b1085237da2571309acd 157 Gene3D G3DSA:2.30.110.10 1 156 4.7E-48 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK43_RS07235 bca631e4be42b1085237da2571309acd 157 PANTHER PTHR34071 1 156 5.6E-44 T 22-04-2016 AMK43_RS07235 bca631e4be42b1085237da2571309acd 157 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 11 153 2.8E-14 T 22-04-2016 IPR024747 Pyridoxamine 5'-phosphate oxidase-related AMK43_RS07235 bca631e4be42b1085237da2571309acd 157 SUPERFAMILY SSF50475 1 156 1.94E-41 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK43_RS01760 3b269d12ae876845b02dc12d59794153 198 Pfam PF13847 Methyltransferase domain 72 196 2.9E-26 T 22-04-2016 IPR025714 Methyltransferase domain AMK43_RS01760 3b269d12ae876845b02dc12d59794153 198 Gene3D G3DSA:3.40.50.150 65 191 9.1E-29 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS01760 3b269d12ae876845b02dc12d59794153 198 PANTHER PTHR10108 65 188 5.0E-26 T 22-04-2016 AMK43_RS01760 3b269d12ae876845b02dc12d59794153 198 SUPERFAMILY SSF53335 43 191 2.32E-26 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS01760 3b269d12ae876845b02dc12d59794153 198 PANTHER PTHR10108:SF911 65 188 5.0E-26 T 22-04-2016 AMK43_RS00705 b1d864a7ebe6781064144403255161cb 249 Pfam PF02308 MgtC family 28 166 8.3E-35 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK43_RS00705 b1d864a7ebe6781064144403255161cb 249 PRINTS PR01837 MgtC/SapB protein signature 50 68 3.8E-37 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK43_RS00705 b1d864a7ebe6781064144403255161cb 249 PRINTS PR01837 MgtC/SapB protein signature 31 50 3.8E-37 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK43_RS00705 b1d864a7ebe6781064144403255161cb 249 PRINTS PR01837 MgtC/SapB protein signature 120 144 3.8E-37 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK43_RS00705 b1d864a7ebe6781064144403255161cb 249 PRINTS PR01837 MgtC/SapB protein signature 92 114 3.8E-37 T 22-04-2016 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 AMK43_RS00705 b1d864a7ebe6781064144403255161cb 249 PANTHER PTHR33778 26 208 2.2E-52 T 22-04-2016 AMK43_RS00320 c19cdd6c9b59699b6d7fa99d68a38de7 94 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 5.6E-24 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00320 c19cdd6c9b59699b6d7fa99d68a38de7 94 PANTHER PTHR21011 1 94 1.4E-21 T 22-04-2016 AMK43_RS00320 c19cdd6c9b59699b6d7fa99d68a38de7 94 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 16.385 T 22-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00320 c19cdd6c9b59699b6d7fa99d68a38de7 94 SUPERFAMILY SSF54995 1 94 8.11E-28 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00320 c19cdd6c9b59699b6d7fa99d68a38de7 94 Gene3D G3DSA:3.30.70.60 1 94 1.2E-29 T 22-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 AMK43_RS00320 c19cdd6c9b59699b6d7fa99d68a38de7 94 Pfam PF01250 Ribosomal protein S6 3 92 2.0E-24 T 22-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 AMK43_RS07530 06a8d38802aecf6df8b1a50bd9ba058a 480 Pfam PF10397 Adenylosuccinate lyase C-terminus 373 454 9.3E-14 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AMK43_RS07530 06a8d38802aecf6df8b1a50bd9ba058a 480 PANTHER PTHR11444:SF2 1 468 3.4E-189 T 22-04-2016 AMK43_RS07530 06a8d38802aecf6df8b1a50bd9ba058a 480 PRINTS PR00149 Fumarate lyase superfamily signature 240 267 3.0E-8 T 22-04-2016 IPR000362 Fumarate lyase family AMK43_RS07530 06a8d38802aecf6df8b1a50bd9ba058a 480 PRINTS PR00149 Fumarate lyase superfamily signature 283 299 3.0E-8 T 22-04-2016 IPR000362 Fumarate lyase family AMK43_RS07530 06a8d38802aecf6df8b1a50bd9ba058a 480 PRINTS PR00149 Fumarate lyase superfamily signature 146 164 3.0E-8 T 22-04-2016 IPR000362 Fumarate lyase family AMK43_RS07530 06a8d38802aecf6df8b1a50bd9ba058a 480 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 11 455 6.2E-117 T 22-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AMK43_RS07530 06a8d38802aecf6df8b1a50bd9ba058a 480 Gene3D G3DSA:1.20.200.10 105 453 1.1E-107 T 22-04-2016 AMK43_RS07530 06a8d38802aecf6df8b1a50bd9ba058a 480 SMART SM00998 372 456 5.2E-14 T 22-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 AMK43_RS07530 06a8d38802aecf6df8b1a50bd9ba058a 480 SUPERFAMILY SSF48557 10 457 5.03E-94 T 22-04-2016 IPR008948 L-Aspartase-like GO:0003824 AMK43_RS07530 06a8d38802aecf6df8b1a50bd9ba058a 480 Pfam PF00206 Lyase 60 306 5.1E-20 T 22-04-2016 IPR022761 Fumarate lyase, N-terminal AMK43_RS07530 06a8d38802aecf6df8b1a50bd9ba058a 480 ProSitePatterns PS00163 Fumarate lyases signature. 283 292 - T 22-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 AMK43_RS07530 06a8d38802aecf6df8b1a50bd9ba058a 480 PANTHER PTHR11444 1 468 3.4E-189 T 22-04-2016 IPR000362 Fumarate lyase family AMK43_RS07530 06a8d38802aecf6df8b1a50bd9ba058a 480 Gene3D G3DSA:1.10.275.10 13 104 1.9E-30 T 22-04-2016 IPR024083 Fumarase/histidase, N-terminal AMK43_RS07510 32431aa26452e87c3612a15909f4bd74 165 Gene3D G3DSA:3.40.960.10 20 132 2.8E-45 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMK43_RS07510 32431aa26452e87c3612a15909f4bd74 165 SUPERFAMILY SSF52980 4 122 1.5E-43 T 22-04-2016 IPR011335 Restriction endonuclease type II-like AMK43_RS07510 32431aa26452e87c3612a15909f4bd74 165 Pfam PF03852 DNA mismatch endonuclease Vsr 5 71 2.7E-26 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMK43_RS07510 32431aa26452e87c3612a15909f4bd74 165 PIRSF PIRSF018267 1 146 2.6E-50 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMK43_RS07510 32431aa26452e87c3612a15909f4bd74 165 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 2 118 3.2E-37 T 22-04-2016 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 AMK43_RS04120 b273b7fa77bc89a8732696a8c85bb63d 256 PANTHER PTHR36833 3 256 1.9E-22 T 22-04-2016 AMK43_RS04120 b273b7fa77bc89a8732696a8c85bb63d 256 Pfam PF06182 ABC-2 family transporter protein 33 255 9.7E-29 T 22-04-2016 IPR010390 Protein of unknown function DUF990 AMK43_RS10165 91f3c989cbebaad5175caa9186f4be9e 130 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 8 93 1.2E-21 T 22-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 AMK43_RS10165 91f3c989cbebaad5175caa9186f4be9e 130 Gene3D G3DSA:1.10.3420.10 2 126 1.0E-40 T 22-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain AMK43_RS01630 1d78bdddce35cd189a97fa6e3b941757 425 SUPERFAMILY SSF103473 3 408 3.66E-44 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK43_RS01630 1d78bdddce35cd189a97fa6e3b941757 425 PANTHER PTHR23513 2 386 8.8E-75 T 22-04-2016 AMK43_RS01630 1d78bdddce35cd189a97fa6e3b941757 425 Pfam PF07690 Major Facilitator Superfamily 7 350 1.1E-31 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK43_RS01630 1d78bdddce35cd189a97fa6e3b941757 425 Gene3D G3DSA:1.20.1250.20 3 191 3.0E-23 T 22-04-2016 AMK43_RS01630 1d78bdddce35cd189a97fa6e3b941757 425 Gene3D G3DSA:1.20.1250.20 210 407 5.0E-10 T 22-04-2016 AMK43_RS01630 1d78bdddce35cd189a97fa6e3b941757 425 PANTHER PTHR23513:SF4 2 386 8.8E-75 T 22-04-2016 AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 SUPERFAMILY SSF52540 1054 1072 2.13E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 SUPERFAMILY SSF52540 350 569 2.13E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 PANTHER PTHR10887 252 437 6.3E-59 T 22-04-2016 AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 PANTHER PTHR10887 122 182 6.3E-59 T 22-04-2016 AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 PANTHER PTHR10887 1114 1337 6.3E-59 T 22-04-2016 AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 PANTHER PTHR10887 934 1097 6.3E-59 T 22-04-2016 AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 PANTHER PTHR10887 1 61 6.3E-59 T 22-04-2016 AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 Pfam PF04480 Protein of unknown function (DUF559) 1366 1448 6.5E-7 T 22-04-2016 IPR007569 Domain of unknown function DUF559 AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 Pfam PF13245 Part of AAA domain 366 419 2.6E-11 T 22-04-2016 AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 PANTHER PTHR10887:SF340 252 437 6.3E-59 T 22-04-2016 AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 PANTHER PTHR10887:SF340 122 182 6.3E-59 T 22-04-2016 AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 PANTHER PTHR10887:SF340 1114 1337 6.3E-59 T 22-04-2016 AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 PANTHER PTHR10887:SF340 934 1097 6.3E-59 T 22-04-2016 AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 PANTHER PTHR10887:SF340 1 61 6.3E-59 T 22-04-2016 AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 Pfam PF13087 AAA domain 1132 1314 3.7E-15 T 22-04-2016 AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 SUPERFAMILY SSF52540 1038 1313 8.32E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 SUPERFAMILY SSF52540 356 423 8.32E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 SUPERFAMILY SSF52540 759 836 8.32E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 SUPERFAMILY SSF52540 1398 1453 8.32E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 Gene3D G3DSA:3.40.50.300 1059 1168 1.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07960 5b6b30a87ab3d4dc8249ffad84655c47 1497 Gene3D G3DSA:3.40.50.300 336 471 1.4E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05600 2df8a2aff5506cde3d01fafa50c591ec 430 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 47 430 8.9E-24 T 22-04-2016 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) AMK43_RS05600 2df8a2aff5506cde3d01fafa50c591ec 430 PANTHER PTHR35093 155 430 1.7E-15 T 22-04-2016 AMK43_RS05600 2df8a2aff5506cde3d01fafa50c591ec 430 Gene3D G3DSA:2.40.160.60 44 430 3.0E-54 T 22-04-2016 AMK43_RS05600 2df8a2aff5506cde3d01fafa50c591ec 430 SUPERFAMILY SSF56935 44 430 2.32E-35 T 22-04-2016 AMK43_RS02135 1ad80361bf352fcb921d6a084b5118d4 83 Pfam PF04024 PspC domain 3 56 2.1E-19 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal AMK43_RS02135 1ad80361bf352fcb921d6a084b5118d4 83 PANTHER PTHR33885 1 83 4.4E-23 T 22-04-2016 AMK43_RS03980 e53e474b6a3be93ba94efbf43a8cdd4d 190 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 1 190 8.8E-72 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 AMK43_RS03980 e53e474b6a3be93ba94efbf43a8cdd4d 190 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 1 190 23.765 T 22-04-2016 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 AMK43_RS03980 e53e474b6a3be93ba94efbf43a8cdd4d 190 Pfam PF02508 Rnf-Nqr subunit, membrane protein 4 189 7.4E-55 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AMK43_RS03980 e53e474b6a3be93ba94efbf43a8cdd4d 190 PANTHER PTHR30335 1 190 6.0E-94 T 22-04-2016 AMK43_RS03980 e53e474b6a3be93ba94efbf43a8cdd4d 190 PIRSF PIRSF006102 1 190 1.3E-52 T 22-04-2016 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 AMK43_RS03980 e53e474b6a3be93ba94efbf43a8cdd4d 190 PANTHER PTHR30335:SF0 1 190 6.0E-94 T 22-04-2016 AMK43_RS02260 56fa64aab4217fb87d9f8d40101c1990 363 SUPERFAMILY SSF51412 8 361 2.59E-48 T 22-04-2016 AMK43_RS02260 56fa64aab4217fb87d9f8d40101c1990 363 PANTHER PTHR32332 3 51 8.7E-163 T 22-04-2016 AMK43_RS02260 56fa64aab4217fb87d9f8d40101c1990 363 PANTHER PTHR32332 75 363 8.7E-163 T 22-04-2016 AMK43_RS02260 56fa64aab4217fb87d9f8d40101c1990 363 Gene3D G3DSA:3.20.20.70 8 292 2.0E-49 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS02260 56fa64aab4217fb87d9f8d40101c1990 363 Gene3D G3DSA:3.20.20.70 329 355 2.0E-49 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS02260 56fa64aab4217fb87d9f8d40101c1990 363 Pfam PF03060 Nitronate monooxygenase 8 359 1.1E-77 T 22-04-2016 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 AMK43_RS02260 56fa64aab4217fb87d9f8d40101c1990 363 PANTHER PTHR32332:SF18 3 51 8.7E-163 T 22-04-2016 AMK43_RS02260 56fa64aab4217fb87d9f8d40101c1990 363 PANTHER PTHR32332:SF18 75 363 8.7E-163 T 22-04-2016 AMK43_RS06615 9d69eb9e1538efe23f70d0ac725fc1eb 58 Pfam PF12838 4Fe-4S dicluster domain 9 53 1.7E-9 T 22-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain AMK43_RS06615 9d69eb9e1538efe23f70d0ac725fc1eb 58 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK43_RS06615 9d69eb9e1538efe23f70d0ac725fc1eb 58 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 39 50 - T 22-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site AMK43_RS06615 9d69eb9e1538efe23f70d0ac725fc1eb 58 SUPERFAMILY SSF54862 5 56 1.12E-18 T 22-04-2016 AMK43_RS06615 9d69eb9e1538efe23f70d0ac725fc1eb 58 PRINTS PR00354 7Fe ferredoxin signature 34 51 3.9E-5 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 AMK43_RS06615 9d69eb9e1538efe23f70d0ac725fc1eb 58 PRINTS PR00354 7Fe ferredoxin signature 18 28 3.9E-5 T 22-04-2016 IPR000813 7Fe ferredoxin GO:0009055 AMK43_RS06615 9d69eb9e1538efe23f70d0ac725fc1eb 58 Gene3D G3DSA:3.30.70.20 5 55 3.4E-19 T 22-04-2016 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 Gene3D G3DSA:3.90.190.20 354 501 2.1E-49 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 PANTHER PTHR23135:SF4 8 247 3.3E-173 T 22-04-2016 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 PANTHER PTHR23135:SF4 266 507 3.3E-173 T 22-04-2016 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 Gene3D G3DSA:3.40.1190.10 102 353 1.6E-69 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 Gene3D G3DSA:3.40.1390.10 6 100 1.3E-21 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 SUPERFAMILY SSF63418 11 102 1.19E-19 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 PANTHER PTHR23135 8 247 3.3E-173 T 22-04-2016 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 PANTHER PTHR23135 266 507 3.3E-173 T 22-04-2016 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 Pfam PF01225 Mur ligase family, catalytic domain 20 99 2.2E-12 T 22-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 Pfam PF02875 Mur ligase family, glutamate ligase domain 350 435 3.6E-18 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 Pfam PF08245 Mur ligase middle domain 111 329 2.6E-47 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 SUPERFAMILY SSF53623 102 347 3.66E-63 T 22-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 507 33.173 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 SUPERFAMILY SSF53244 350 507 2.75E-40 T 22-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 AMK43_RS09425 e2a4c3d75861010db9cad0a01a06a2ef 508 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 19 507 9.6E-149 T 22-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 AMK43_RS04085 9ba00c51a68c2c38a3c9c5673a831e61 682 Gene3D G3DSA:1.10.3210.10 467 633 3.3E-24 T 22-04-2016 IPR006674 HD domain AMK43_RS04085 9ba00c51a68c2c38a3c9c5673a831e61 682 Pfam PF07698 7TM receptor with intracellular HD hydrolase 267 445 4.3E-24 T 22-04-2016 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain AMK43_RS04085 9ba00c51a68c2c38a3c9c5673a831e61 682 TIGRFAM TIGR00277 HDIG: HDIG domain 468 565 5.6E-18 T 22-04-2016 IPR006675 HDIG domain AMK43_RS04085 9ba00c51a68c2c38a3c9c5673a831e61 682 PANTHER PTHR36442 26 682 1.4E-149 T 22-04-2016 AMK43_RS04085 9ba00c51a68c2c38a3c9c5673a831e61 682 Pfam PF01966 HD domain 470 611 4.8E-14 T 22-04-2016 IPR006674 HD domain AMK43_RS04085 9ba00c51a68c2c38a3c9c5673a831e61 682 SMART SM00471 466 621 2.2E-6 T 22-04-2016 IPR003607 HD/PDEase domain AMK43_RS04085 9ba00c51a68c2c38a3c9c5673a831e61 682 SUPERFAMILY SSF109604 469 631 7.71E-15 T 22-04-2016 AMK43_RS04085 9ba00c51a68c2c38a3c9c5673a831e61 682 Pfam PF07697 7TM-HD extracellular 59 258 2.1E-22 T 22-04-2016 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain AMK43_RS03705 5c8bb9214f84b5257c0db930195c2b7e 229 PANTHER PTHR26402 2 226 2.2E-95 T 22-04-2016 AMK43_RS03705 5c8bb9214f84b5257c0db930195c2b7e 229 Pfam PF00072 Response regulator receiver domain 4 112 4.0E-29 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS03705 5c8bb9214f84b5257c0db930195c2b7e 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 225 1.4E-27 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK43_RS03705 5c8bb9214f84b5257c0db930195c2b7e 229 SUPERFAMILY SSF52172 1 176 1.18E-40 T 22-04-2016 IPR011006 CheY-like superfamily AMK43_RS03705 5c8bb9214f84b5257c0db930195c2b7e 229 Gene3D G3DSA:3.40.50.2300 1 124 5.7E-41 T 22-04-2016 AMK43_RS03705 5c8bb9214f84b5257c0db930195c2b7e 229 SMART SM00862 149 225 1.1E-24 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK43_RS03705 5c8bb9214f84b5257c0db930195c2b7e 229 SMART SM00448 2 112 1.6E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS03705 5c8bb9214f84b5257c0db930195c2b7e 229 Gene3D G3DSA:1.10.10.10 127 226 6.0E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03705 5c8bb9214f84b5257c0db930195c2b7e 229 PANTHER PTHR26402:SF614 2 226 2.2E-95 T 22-04-2016 AMK43_RS07540 a835cbe014d675ec70ec16936889cea1 432 PANTHER PTHR11846 3 427 1.3E-240 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK43_RS07540 a835cbe014d675ec70ec16936889cea1 432 Pfam PF00709 Adenylosuccinate synthetase 7 422 8.4E-180 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK43_RS07540 a835cbe014d675ec70ec16936889cea1 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 22-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 AMK43_RS07540 a835cbe014d675ec70ec16936889cea1 432 Gene3D G3DSA:3.90.170.10 266 424 1.0E-67 T 22-04-2016 AMK43_RS07540 a835cbe014d675ec70ec16936889cea1 432 Gene3D G3DSA:3.40.440.10 195 265 9.1E-71 T 22-04-2016 AMK43_RS07540 a835cbe014d675ec70ec16936889cea1 432 Gene3D G3DSA:3.40.440.10 4 95 9.1E-71 T 22-04-2016 AMK43_RS07540 a835cbe014d675ec70ec16936889cea1 432 Gene3D G3DSA:1.10.300.10 102 194 4.7E-37 T 22-04-2016 AMK43_RS07540 a835cbe014d675ec70ec16936889cea1 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 12 19 - T 22-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK43_RS07540 a835cbe014d675ec70ec16936889cea1 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 7 422 1.5E-172 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK43_RS07540 a835cbe014d675ec70ec16936889cea1 432 SMART SM00788 5 423 3.1E-269 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK43_RS07540 a835cbe014d675ec70ec16936889cea1 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 188.947 T 22-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 AMK43_RS07540 a835cbe014d675ec70ec16936889cea1 432 SUPERFAMILY SSF52540 4 423 5.67E-170 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02370 eb78af5138fe3c30885faf264e1f091c 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 9.3E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS02370 eb78af5138fe3c30885faf264e1f091c 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 9.3E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS02370 eb78af5138fe3c30885faf264e1f091c 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 9.3E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS02370 eb78af5138fe3c30885faf264e1f091c 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 9.3E-10 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS02370 eb78af5138fe3c30885faf264e1f091c 141 Pfam PF01047 MarR family 34 91 1.0E-14 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS02370 eb78af5138fe3c30885faf264e1f091c 141 PANTHER PTHR33164 6 136 7.6E-24 T 22-04-2016 AMK43_RS02370 eb78af5138fe3c30885faf264e1f091c 141 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 22-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site AMK43_RS02370 eb78af5138fe3c30885faf264e1f091c 141 Gene3D G3DSA:1.10.10.10 12 138 4.0E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02370 eb78af5138fe3c30885faf264e1f091c 141 PANTHER PTHR33164:SF4 6 136 7.6E-24 T 22-04-2016 AMK43_RS02370 eb78af5138fe3c30885faf264e1f091c 141 SUPERFAMILY SSF46785 11 138 1.88E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02370 eb78af5138fe3c30885faf264e1f091c 141 SMART SM00347 27 127 3.6E-24 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS06990 1962194071dafaffbe6f1128a394eb06 344 PANTHER PTHR24220:SF535 9 330 2.8E-146 T 22-04-2016 AMK43_RS06990 1962194071dafaffbe6f1128a394eb06 344 Pfam PF00005 ABC transporter 27 185 2.8E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS06990 1962194071dafaffbe6f1128a394eb06 344 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 321 1.3E-23 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK43_RS06990 1962194071dafaffbe6f1128a394eb06 344 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 294 7.2E-17 T 22-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 AMK43_RS06990 1962194071dafaffbe6f1128a394eb06 344 SMART SM00382 36 235 2.1E-14 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS06990 1962194071dafaffbe6f1128a394eb06 344 Gene3D G3DSA:3.40.50.300 3 266 2.3E-76 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06990 1962194071dafaffbe6f1128a394eb06 344 PANTHER PTHR24220 9 330 2.8E-146 T 22-04-2016 AMK43_RS06990 1962194071dafaffbe6f1128a394eb06 344 SUPERFAMILY SSF52540 7 257 6.65E-70 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02945 60b5da28ff28f2f29670a2f8490aff40 213 SUPERFAMILY SSF52242 72 211 2.22E-34 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMK43_RS02945 60b5da28ff28f2f29670a2f8490aff40 213 SUPERFAMILY SSF47644 4 81 6.93E-17 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK43_RS02945 60b5da28ff28f2f29670a2f8490aff40 213 Pfam PF02607 B12 binding domain 5 77 7.6E-16 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK43_RS02945 60b5da28ff28f2f29670a2f8490aff40 213 Pfam PF02310 B12 binding domain 91 203 1.7E-22 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMK43_RS02945 60b5da28ff28f2f29670a2f8490aff40 213 Gene3D G3DSA:1.10.1240.10 5 76 2.5E-15 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK43_RS02945 60b5da28ff28f2f29670a2f8490aff40 213 Gene3D G3DSA:3.40.50.280 77 210 3.1E-39 T 22-04-2016 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 AMK43_RS02945 60b5da28ff28f2f29670a2f8490aff40 213 SMART SM01018 2 85 1.3E-20 T 22-04-2016 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain AMK43_RS02670 2da612d0fa0a7abba9925123a6cff271 299 SUPERFAMILY SSF54814 177 292 4.58E-38 T 22-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 AMK43_RS02670 2da612d0fa0a7abba9925123a6cff271 299 Pfam PF07650 KH domain 204 280 1.6E-17 T 22-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 AMK43_RS02670 2da612d0fa0a7abba9925123a6cff271 299 Gene3D G3DSA:3.40.50.300 5 184 4.1E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02670 2da612d0fa0a7abba9925123a6cff271 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 4 274 3.5E-84 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 AMK43_RS02670 2da612d0fa0a7abba9925123a6cff271 299 PANTHER PTHR11649:SF3 2 292 7.3E-96 T 22-04-2016 AMK43_RS02670 2da612d0fa0a7abba9925123a6cff271 299 Pfam PF01926 50S ribosome-binding GTPase 6 120 9.8E-28 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS02670 2da612d0fa0a7abba9925123a6cff271 299 PANTHER PTHR11649 2 292 7.3E-96 T 22-04-2016 AMK43_RS02670 2da612d0fa0a7abba9925123a6cff271 299 Gene3D G3DSA:3.30.300.20 186 287 9.9E-37 T 22-04-2016 IPR015946 K homology domain-like, alpha/beta AMK43_RS02670 2da612d0fa0a7abba9925123a6cff271 299 SUPERFAMILY SSF52540 6 201 1.42E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02670 2da612d0fa0a7abba9925123a6cff271 299 Hamap MF_00367 GTPase Era [era]. 1 291 34.333 T 22-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 AMK43_RS02670 2da612d0fa0a7abba9925123a6cff271 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 165 9.1E-28 T 22-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 AMK43_RS02670 2da612d0fa0a7abba9925123a6cff271 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 73 91 4.7E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS02670 2da612d0fa0a7abba9925123a6cff271 299 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 4.7E-6 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS08675 e96435d243f938af49bb2889e6bc0adc 235 SUPERFAMILY SSF46785 2 75 1.89E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS08675 e96435d243f938af49bb2889e6bc0adc 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 1.8E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK43_RS08675 e96435d243f938af49bb2889e6bc0adc 235 PANTHER PTHR11751 118 140 9.7E-17 T 22-04-2016 AMK43_RS08675 e96435d243f938af49bb2889e6bc0adc 235 PANTHER PTHR11751 1 69 9.7E-17 T 22-04-2016 AMK43_RS08675 e96435d243f938af49bb2889e6bc0adc 235 SMART SM00866 89 228 2.7E-18 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMK43_RS08675 e96435d243f938af49bb2889e6bc0adc 235 SMART SM00345 7 66 9.6E-9 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK43_RS08675 e96435d243f938af49bb2889e6bc0adc 235 SUPERFAMILY SSF64288 74 232 4.71E-33 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AMK43_RS08675 e96435d243f938af49bb2889e6bc0adc 235 Gene3D G3DSA:3.40.1410.10 61 235 1.8E-41 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AMK43_RS08675 e96435d243f938af49bb2889e6bc0adc 235 PANTHER PTHR11751:SF347 118 140 9.7E-17 T 22-04-2016 AMK43_RS08675 e96435d243f938af49bb2889e6bc0adc 235 PANTHER PTHR11751:SF347 1 69 9.7E-17 T 22-04-2016 AMK43_RS08675 e96435d243f938af49bb2889e6bc0adc 235 Pfam PF07702 UTRA domain 93 227 1.7E-26 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMK43_RS08675 e96435d243f938af49bb2889e6bc0adc 235 Gene3D G3DSA:1.10.10.10 2 60 3.9E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 PANTHER PTHR22939 34 378 5.8E-114 T 22-04-2016 AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 Pfam PF13365 Trypsin-like peptidase domain 109 244 1.5E-33 T 22-04-2016 AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 Gene3D G3DSA:2.40.10.10 175 285 2.7E-38 T 22-04-2016 AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 SUPERFAMILY SSF50156 241 365 6.31E-23 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 Pfam PF13180 PDZ domain 283 374 7.8E-20 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 SUPERFAMILY SSF50494 61 279 1.44E-60 T 22-04-2016 IPR009003 Peptidase S1, PA clan AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 PRINTS PR00834 HtrA/DegQ protease family signature 180 204 5.4E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 PRINTS PR00834 HtrA/DegQ protease family signature 323 335 5.4E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 PRINTS PR00834 HtrA/DegQ protease family signature 139 159 5.4E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 PRINTS PR00834 HtrA/DegQ protease family signature 215 232 5.4E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 PRINTS PR00834 HtrA/DegQ protease family signature 118 130 5.4E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 PRINTS PR00834 HtrA/DegQ protease family signature 237 254 5.4E-52 T 22-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 SMART SM00228 283 365 8.0E-12 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 Gene3D G3DSA:2.40.10.10 52 174 1.1E-34 T 22-04-2016 AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 Gene3D G3DSA:2.30.42.10 286 378 3.6E-26 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS08460 b6da415ee925e481debb95de781e4325 384 PANTHER PTHR22939:SF79 34 378 5.8E-114 T 22-04-2016 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 PANTHER PTHR11451 4 244 9.6E-151 T 22-04-2016 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 PANTHER PTHR11451 399 570 9.6E-151 T 22-04-2016 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 SUPERFAMILY SSF55681 407 476 4.42E-104 T 22-04-2016 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 SUPERFAMILY SSF55681 10 237 4.42E-104 T 22-04-2016 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 Pfam PF03129 Anticodon binding domain 478 566 1.5E-18 T 22-04-2016 IPR004154 Anticodon-binding AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 SUPERFAMILY SSF55826 218 385 3.66E-22 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 564 5.1E-233 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 PIRSF PIRSF001535 1 570 2.5E-256 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 Gene3D G3DSA:3.90.960.10 246 378 2.4E-25 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 Gene3D G3DSA:3.30.930.10 389 470 6.3E-107 T 22-04-2016 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 Gene3D G3DSA:3.30.930.10 12 234 6.3E-107 T 22-04-2016 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 SUPERFAMILY SSF52954 463 569 4.53E-26 T 22-04-2016 IPR004154 Anticodon-binding AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 PANTHER PTHR11451:SF3 4 244 9.6E-151 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 PANTHER PTHR11451:SF3 399 570 9.6E-151 T 22-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 Gene3D G3DSA:3.40.50.800 471 569 8.5E-25 T 22-04-2016 IPR004154 Anticodon-binding AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 5.0E-55 T 22-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.4E-20 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.4E-20 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.4E-20 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.4E-20 T 22-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 569 40.39 T 22-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 AMK43_RS09285 606839e56fda9c5e4264c155e94b866a 570 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 4.1E-23 T 22-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 SUPERFAMILY SSF52009 373 488 1.83E-31 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 Gene3D G3DSA:3.20.20.60 510 848 5.6E-128 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 Pfam PF00391 PEP-utilising enzyme, mobile domain 397 480 3.6E-24 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 Gene3D G3DSA:3.30.1490.20 181 224 2.6E-51 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 Gene3D G3DSA:3.30.1490.20 2 108 2.6E-51 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 Gene3D G3DSA:3.50.30.10 384 483 3.5E-34 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 SUPERFAMILY SSF51621 488 847 3.45E-118 T 22-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 2 846 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 Gene3D G3DSA:1.20.80.30 109 164 1.1E-10 T 22-04-2016 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 284 338 8.4E-11 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 16 281 1.6E-43 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 PANTHER PTHR22931 1 852 0.0 T 22-04-2016 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 SUPERFAMILY SSF56059 1 359 5.3E-121 T 22-04-2016 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 Gene3D G3DSA:1.10.189.10 323 383 9.0E-23 T 22-04-2016 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 Gene3D G3DSA:3.30.470.20 225 322 2.4E-37 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 PIRSF PIRSF000853 1 852 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 496 845 8.2E-81 T 22-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 737 755 - T 22-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 AMK43_RS02025 183c60dd848a7b992850b2fbefd98e0e 852 PANTHER PTHR22931:SF9 1 852 0.0 T 22-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK43_RS09865 b8d3912b18360cb211fa4bc15454d004 176 SUPERFAMILY SSF53271 13 170 1.19E-46 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS09865 b8d3912b18360cb211fa4bc15454d004 176 Gene3D G3DSA:3.40.50.2020 5 176 1.2E-66 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS09865 b8d3912b18360cb211fa4bc15454d004 176 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 176 35.708 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 AMK43_RS09865 b8d3912b18360cb211fa4bc15454d004 176 Pfam PF00156 Phosphoribosyl transferase domain 49 155 6.8E-13 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK43_RS09865 b8d3912b18360cb211fa4bc15454d004 176 PANTHER PTHR32315 4 176 2.9E-74 T 22-04-2016 AMK43_RS09865 b8d3912b18360cb211fa4bc15454d004 176 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 175 5.2E-67 T 22-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 AMK43_RS02300 5aa019de5508637413540f06243e73b1 174 SUPERFAMILY SSF55469 1 167 1.83E-34 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 AMK43_RS02300 5aa019de5508637413540f06243e73b1 174 Pfam PF00881 Nitroreductase family 10 154 1.4E-20 T 22-04-2016 IPR029479 Nitroreductase AMK43_RS02300 5aa019de5508637413540f06243e73b1 174 PANTHER PTHR23026 1 156 1.9E-38 T 22-04-2016 AMK43_RS02300 5aa019de5508637413540f06243e73b1 174 PANTHER PTHR23026:SF105 1 156 1.9E-38 T 22-04-2016 AMK43_RS02300 5aa019de5508637413540f06243e73b1 174 Gene3D G3DSA:3.40.109.10 1 169 2.6E-32 T 22-04-2016 IPR000415 Nitroreductase-like GO:0016491 AMK43_RS05505 b246cdcf2d3ab967d1463779c8e7b1ee 258 SMART SM00382 35 220 2.7E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS05505 b246cdcf2d3ab967d1463779c8e7b1ee 258 Pfam PF00005 ABC transporter 28 171 1.4E-29 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS05505 b246cdcf2d3ab967d1463779c8e7b1ee 258 Gene3D G3DSA:3.40.50.300 3 243 8.6E-64 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05505 b246cdcf2d3ab967d1463779c8e7b1ee 258 SUPERFAMILY SSF52540 9 231 2.19E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05505 b246cdcf2d3ab967d1463779c8e7b1ee 258 PANTHER PTHR24220:SF581 12 239 1.0E-122 T 22-04-2016 AMK43_RS05505 b246cdcf2d3ab967d1463779c8e7b1ee 258 PANTHER PTHR24220 12 239 1.0E-122 T 22-04-2016 AMK43_RS05505 b246cdcf2d3ab967d1463779c8e7b1ee 258 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS10170 2476e53e93e221c07aaf345dd3460247 244 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 38 240 1.0E-42 T 22-04-2016 AMK43_RS10170 2476e53e93e221c07aaf345dd3460247 244 PANTHER PTHR23291 39 244 1.0E-54 T 22-04-2016 IPR006214 Bax inhibitor 1-related AMK43_RS10170 2476e53e93e221c07aaf345dd3460247 244 PANTHER PTHR23291:SF42 39 244 1.0E-54 T 22-04-2016 AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 PANTHER PTHR22769 1 190 1.7E-47 T 22-04-2016 AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 22-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 Gene3D G3DSA:3.90.79.10 3 150 3.9E-34 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 PRINTS PR01402 Mutator MutX protein signature 115 132 6.4E-21 T 22-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 PRINTS PR01402 Mutator MutX protein signature 2 20 6.4E-21 T 22-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 PRINTS PR01402 Mutator MutX protein signature 20 35 6.4E-21 T 22-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 PRINTS PR01402 Mutator MutX protein signature 95 115 6.4E-21 T 22-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 PRINTS PR01402 Mutator MutX protein signature 132 152 6.4E-21 T 22-04-2016 IPR003562 Mutator MutX protein GO:0006281|GO:0008413 MetaCyc: PWY-6502 AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 PANTHER PTHR22769:SF39 1 190 1.7E-47 T 22-04-2016 AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 PRINTS PR00502 NUDIX hydrolase family signature 31 45 3.7E-5 T 22-04-2016 IPR020476 NUDIX hydrolase AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 PRINTS PR00502 NUDIX hydrolase family signature 45 60 3.7E-5 T 22-04-2016 IPR020476 NUDIX hydrolase AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 Pfam PF00293 NUDIX domain 8 123 7.2E-16 T 22-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 SUPERFAMILY SSF55811 5 133 5.96E-24 T 22-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 Gene3D G3DSA:3.30.70.830 152 254 1.1E-17 T 22-04-2016 AMK43_RS01155 cf9f2588efa30f0e957c67dbf17c1bde 255 SUPERFAMILY SSF102705 150 253 6.67E-8 T 22-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 AMK43_RS09705 0361a120f1fb4d78d898460f3f9f9ab8 163 SUPERFAMILY SSF55729 16 163 2.93E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS09705 0361a120f1fb4d78d898460f3f9f9ab8 163 Gene3D G3DSA:3.40.630.30 24 163 7.6E-15 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS09705 0361a120f1fb4d78d898460f3f9f9ab8 163 Pfam PF00583 Acetyltransferase (GNAT) family 63 140 1.2E-4 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS02390 d2782657d7252149b24671eec85f1cfb 326 Pfam PF01032 FecCD transport family 11 322 8.3E-91 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 AMK43_RS02390 d2782657d7252149b24671eec85f1cfb 326 SUPERFAMILY SSF81345 3 322 2.88E-76 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK43_RS02390 d2782657d7252149b24671eec85f1cfb 326 Gene3D G3DSA:1.10.3470.10 4 324 1.7E-99 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK43_RS02390 d2782657d7252149b24671eec85f1cfb 326 PANTHER PTHR30472:SF3 4 325 9.3E-119 T 22-04-2016 AMK43_RS02390 d2782657d7252149b24671eec85f1cfb 326 PANTHER PTHR30472 4 325 9.3E-119 T 22-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 6 469 7.1E-155 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PRINTS PR00934 X-His dipeptidase (M25) signature 245 264 1.8E-45 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PRINTS PR00934 X-His dipeptidase (M25) signature 132 149 1.8E-45 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PRINTS PR00934 X-His dipeptidase (M25) signature 418 434 1.8E-45 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PRINTS PR00934 X-His dipeptidase (M25) signature 202 219 1.8E-45 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PRINTS PR00934 X-His dipeptidase (M25) signature 99 117 1.8E-45 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PRINTS PR00934 X-His dipeptidase (M25) signature 440 462 1.8E-45 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PRINTS PR00934 X-His dipeptidase (M25) signature 156 174 1.8E-45 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PRINTS PR00934 X-His dipeptidase (M25) signature 78 97 1.8E-45 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 SUPERFAMILY SSF53187 387 472 2.32E-55 T 22-04-2016 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 SUPERFAMILY SSF53187 8 179 2.32E-55 T 22-04-2016 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 Gene3D G3DSA:3.40.630.10 387 472 2.9E-89 T 22-04-2016 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 Gene3D G3DSA:3.40.630.10 3 178 2.9E-89 T 22-04-2016 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PANTHER PTHR11014:SF54 362 472 1.2E-130 T 22-04-2016 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PANTHER PTHR11014:SF54 200 281 1.2E-130 T 22-04-2016 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PANTHER PTHR11014:SF54 6 182 1.2E-130 T 22-04-2016 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PIRSF PIRSF016599 1 473 6.0E-161 T 22-04-2016 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PANTHER PTHR11014 362 472 1.2E-130 T 22-04-2016 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PANTHER PTHR11014 200 281 1.2E-130 T 22-04-2016 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 PANTHER PTHR11014 6 182 1.2E-130 T 22-04-2016 AMK43_RS09710 2bde59f083c8c856e3547723017b1f59 473 Pfam PF01546 Peptidase family M20/M25/M40 70 469 4.5E-19 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK43_RS00675 77c903aa45cac59d515b584eda50ac30 190 PANTHER PTHR24220 3 182 5.2E-53 T 22-04-2016 AMK43_RS00675 77c903aa45cac59d515b584eda50ac30 190 ProSitePatterns PS00211 ABC transporters family signature. 118 132 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS00675 77c903aa45cac59d515b584eda50ac30 190 Gene3D G3DSA:3.40.50.300 1 187 3.4E-50 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00675 77c903aa45cac59d515b584eda50ac30 190 SUPERFAMILY SSF52540 2 188 4.75E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00675 77c903aa45cac59d515b584eda50ac30 190 SMART SM00382 26 190 1.1E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS00675 77c903aa45cac59d515b584eda50ac30 190 Pfam PF00005 ABC transporter 18 145 7.7E-26 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS02725 49967e2f87b3b12af16dd87701bcca65 462 PIRSF PIRSF006060 1 461 2.9E-87 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMK43_RS02725 49967e2f87b3b12af16dd87701bcca65 462 Pfam PF13520 Amino acid permease 14 439 2.2E-60 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMK43_RS02725 49967e2f87b3b12af16dd87701bcca65 462 PANTHER PTHR11785 10 444 2.6E-99 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMK43_RS10585 0038f839374643bd06fbf71aacb531cf 319 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS10585 0038f839374643bd06fbf71aacb531cf 319 Gene3D G3DSA:3.40.50.300 11 260 1.9E-85 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10585 0038f839374643bd06fbf71aacb531cf 319 SUPERFAMILY SSF52540 14 256 1.1E-72 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10585 0038f839374643bd06fbf71aacb531cf 319 Pfam PF00005 ABC transporter 35 184 6.5E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS10585 0038f839374643bd06fbf71aacb531cf 319 PANTHER PTHR24220:SF336 16 293 2.6E-138 T 22-04-2016 AMK43_RS10585 0038f839374643bd06fbf71aacb531cf 319 PANTHER PTHR24220 16 293 2.6E-138 T 22-04-2016 AMK43_RS10585 0038f839374643bd06fbf71aacb531cf 319 SMART SM00382 44 234 3.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS01420 9b52b174ae18f3751a81ffcb5a746fe0 618 SUPERFAMILY SSF52317 74 248 2.52E-6 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS01420 9b52b174ae18f3751a81ffcb5a746fe0 618 Pfam PF09960 Uncharacterised protein conserved in bacteria (DUF2194) 66 604 1.0E-92 T 22-04-2016 IPR018695 Protein of unknown function DUF2194 AMK43_RS10360 247d4c96c0d598c8b10d84c0526a9f8e 331 Gene3D G3DSA:1.25.40.120 28 60 2.5E-4 T 22-04-2016 AMK43_RS10360 247d4c96c0d598c8b10d84c0526a9f8e 331 Gene3D G3DSA:1.25.40.120 125 196 2.5E-4 T 22-04-2016 AMK43_RS10360 247d4c96c0d598c8b10d84c0526a9f8e 331 Pfam PF12889 Protein of unknown function (DUF3829) 37 320 2.0E-45 T 22-04-2016 IPR024291 Protein of unknown function DUF3829 AMK43_RS00405 740b6e0aa27278f02ef9c7c651011294 212 PANTHER PTHR10746 1 211 4.5E-91 T 22-04-2016 IPR013005 50S ribosomal protein uL4 AMK43_RS00405 740b6e0aa27278f02ef9c7c651011294 212 Pfam PF00573 Ribosomal protein L4/L1 family 17 209 8.8E-67 T 22-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 AMK43_RS00405 740b6e0aa27278f02ef9c7c651011294 212 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 212 34.852 T 22-04-2016 IPR013005 50S ribosomal protein uL4 AMK43_RS00405 740b6e0aa27278f02ef9c7c651011294 212 Gene3D G3DSA:3.40.1370.10 58 212 3.9E-60 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AMK43_RS00405 740b6e0aa27278f02ef9c7c651011294 212 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 209 6.6E-77 T 22-04-2016 IPR013005 50S ribosomal protein uL4 AMK43_RS00405 740b6e0aa27278f02ef9c7c651011294 212 SUPERFAMILY SSF52166 1 211 3.01E-75 T 22-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 AMK43_RS03505 327e38eaf81ba3bbbb0f2cb3741f7c1d 447 PANTHER PTHR11616 2 446 1.7E-126 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMK43_RS03505 327e38eaf81ba3bbbb0f2cb3741f7c1d 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 4.8E-16 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMK43_RS03505 327e38eaf81ba3bbbb0f2cb3741f7c1d 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 4.8E-16 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMK43_RS03505 327e38eaf81ba3bbbb0f2cb3741f7c1d 447 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 299 318 4.8E-16 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMK43_RS03505 327e38eaf81ba3bbbb0f2cb3741f7c1d 447 Pfam PF00209 Sodium:neurotransmitter symporter family 145 444 5.9E-35 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMK43_RS03505 327e38eaf81ba3bbbb0f2cb3741f7c1d 447 Pfam PF00209 Sodium:neurotransmitter symporter family 5 125 1.1E-29 T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMK43_RS03505 327e38eaf81ba3bbbb0f2cb3741f7c1d 447 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 29 43 - T 22-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 AMK43_RS03505 327e38eaf81ba3bbbb0f2cb3741f7c1d 447 PANTHER PTHR11616:SF167 2 446 1.7E-126 T 22-04-2016 AMK43_RS03505 327e38eaf81ba3bbbb0f2cb3741f7c1d 447 SUPERFAMILY SSF161070 5 446 1.96E-133 T 22-04-2016 AMK43_RS03875 716ea47ba64da20cf35b568d3c38066f 424 Pfam PF16325 Peptidase family U32 C-terminal domain 324 405 4.8E-17 T 22-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK43_RS03875 716ea47ba64da20cf35b568d3c38066f 424 PANTHER PTHR30217 1 405 4.3E-170 T 22-04-2016 AMK43_RS03875 716ea47ba64da20cf35b568d3c38066f 424 Pfam PF01136 Peptidase family U32 79 309 1.5E-95 T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK43_RS03875 716ea47ba64da20cf35b568d3c38066f 424 Gene3D G3DSA:3.20.20.70 70 172 6.5E-5 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS03875 716ea47ba64da20cf35b568d3c38066f 424 SUPERFAMILY SSF51395 17 145 6.96E-6 T 22-04-2016 AMK43_RS03875 716ea47ba64da20cf35b568d3c38066f 424 ProSitePatterns PS01276 Peptidase family U32 signature. 165 183 - T 22-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK43_RS03875 716ea47ba64da20cf35b568d3c38066f 424 PANTHER PTHR30217:SF6 1 405 4.3E-170 T 22-04-2016 AMK43_RS06975 4b8e9e37a0728fdaafe0c8f04460fa5e 306 PANTHER PTHR30465:SF2 17 305 8.4E-76 T 22-04-2016 AMK43_RS06975 4b8e9e37a0728fdaafe0c8f04460fa5e 306 SUPERFAMILY SSF161098 95 289 2.62E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS06975 4b8e9e37a0728fdaafe0c8f04460fa5e 306 PANTHER PTHR30465 17 305 8.4E-76 T 22-04-2016 AMK43_RS06975 4b8e9e37a0728fdaafe0c8f04460fa5e 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 304 1.1E-28 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS06975 4b8e9e37a0728fdaafe0c8f04460fa5e 306 Gene3D G3DSA:1.10.3720.10 94 298 2.2E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS01940 3d5ac3d09d3806265422b111f5b81989 487 PANTHER PTHR19211 252 485 8.6E-77 T 22-04-2016 AMK43_RS01940 3d5ac3d09d3806265422b111f5b81989 487 PANTHER PTHR19211 1 227 8.6E-77 T 22-04-2016 AMK43_RS01940 3d5ac3d09d3806265422b111f5b81989 487 ProSitePatterns PS00211 ABC transporters family signature. 118 132 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS01940 3d5ac3d09d3806265422b111f5b81989 487 Gene3D G3DSA:3.40.50.300 302 485 1.4E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01940 3d5ac3d09d3806265422b111f5b81989 487 SMART SM00382 329 474 0.022 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS01940 3d5ac3d09d3806265422b111f5b81989 487 SMART SM00382 30 190 0.0018 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS01940 3d5ac3d09d3806265422b111f5b81989 487 PANTHER PTHR19211:SF45 252 485 8.6E-77 T 22-04-2016 AMK43_RS01940 3d5ac3d09d3806265422b111f5b81989 487 PANTHER PTHR19211:SF45 1 227 8.6E-77 T 22-04-2016 AMK43_RS01940 3d5ac3d09d3806265422b111f5b81989 487 Gene3D G3DSA:3.40.50.300 2 47 2.9E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01940 3d5ac3d09d3806265422b111f5b81989 487 Gene3D G3DSA:3.40.50.300 48 190 2.0E-24 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01940 3d5ac3d09d3806265422b111f5b81989 487 SUPERFAMILY SSF52540 304 486 3.06E-36 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01940 3d5ac3d09d3806265422b111f5b81989 487 SUPERFAMILY SSF52540 3 204 2.18E-33 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01940 3d5ac3d09d3806265422b111f5b81989 487 Pfam PF00005 ABC transporter 321 446 1.4E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS01940 3d5ac3d09d3806265422b111f5b81989 487 Pfam PF00005 ABC transporter 22 146 1.6E-17 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS06775 2731ac8aba07f97ca7c208448a8af4df 535 PANTHER PTHR15239 1 383 3.7E-55 T 22-04-2016 AMK43_RS06775 2731ac8aba07f97ca7c208448a8af4df 535 PANTHER PTHR15239 401 533 3.7E-55 T 22-04-2016 AMK43_RS06775 2731ac8aba07f97ca7c208448a8af4df 535 PANTHER PTHR15239:SF1 1 383 3.7E-55 T 22-04-2016 AMK43_RS06775 2731ac8aba07f97ca7c208448a8af4df 535 PANTHER PTHR15239:SF1 401 533 3.7E-55 T 22-04-2016 AMK43_RS06775 2731ac8aba07f97ca7c208448a8af4df 535 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 5 415 9.8E-70 T 22-04-2016 AMK43_RS06775 2731ac8aba07f97ca7c208448a8af4df 535 Gene3D G3DSA:2.30.310.10 3 161 1.5E-33 T 22-04-2016 AMK43_RS06775 2731ac8aba07f97ca7c208448a8af4df 535 Pfam PF05670 Domain of unknown function (DUF814) 428 514 3.2E-24 T 22-04-2016 IPR008532 Domain of unknown function DUF814 AMK43_RS09805 9971c58ba4e1fa146514119c6a668211 71 Pfam PF00403 Heavy-metal-associated domain 7 60 2.7E-13 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMK43_RS09805 9971c58ba4e1fa146514119c6a668211 71 Gene3D G3DSA:3.30.70.100 1 66 1.2E-18 T 22-04-2016 AMK43_RS09805 9971c58ba4e1fa146514119c6a668211 71 SUPERFAMILY SSF55008 2 68 3.14E-16 T 22-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 AMK43_RS10915 2d776ac3b538efdcdc5824378730cf4e 350 Gene3D G3DSA:3.40.190.10 141 272 1.7E-14 T 22-04-2016 AMK43_RS10915 2d776ac3b538efdcdc5824378730cf4e 350 PANTHER PTHR30006 1 346 3.7E-99 T 22-04-2016 AMK43_RS10915 2d776ac3b538efdcdc5824378730cf4e 350 Gene3D G3DSA:3.40.190.10 273 336 2.2E-32 T 22-04-2016 AMK43_RS10915 2d776ac3b538efdcdc5824378730cf4e 350 Gene3D G3DSA:3.40.190.10 1 136 2.2E-32 T 22-04-2016 AMK43_RS10915 2d776ac3b538efdcdc5824378730cf4e 350 SUPERFAMILY SSF53850 37 341 2.52E-48 T 22-04-2016 AMK43_RS10915 2d776ac3b538efdcdc5824378730cf4e 350 Pfam PF13343 Bacterial extracellular solute-binding protein 92 329 7.5E-28 T 22-04-2016 AMK43_RS10915 2d776ac3b538efdcdc5824378730cf4e 350 PANTHER PTHR30006:SF6 1 346 3.7E-99 T 22-04-2016 AMK43_RS03915 5b86bce95dcefa4b0f0cc87d1fe647d0 181 PRINTS PR01021 OMPA domain signature 103 118 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS03915 5b86bce95dcefa4b0f0cc87d1fe647d0 181 PRINTS PR01021 OMPA domain signature 118 134 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS03915 5b86bce95dcefa4b0f0cc87d1fe647d0 181 PRINTS PR01021 OMPA domain signature 74 96 9.6E-17 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS03915 5b86bce95dcefa4b0f0cc87d1fe647d0 181 Gene3D G3DSA:3.30.1330.60 61 174 2.6E-35 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS03915 5b86bce95dcefa4b0f0cc87d1fe647d0 181 Pfam PF00691 OmpA family 73 168 4.3E-23 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS03915 5b86bce95dcefa4b0f0cc87d1fe647d0 181 PANTHER PTHR30128 32 177 2.6E-43 T 22-04-2016 AMK43_RS03915 5b86bce95dcefa4b0f0cc87d1fe647d0 181 SUPERFAMILY SSF103088 62 174 5.62E-33 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS08380 40be446df514b3a954746cdc1c648adb 497 Pfam PF02378 Phosphotransferase system, EIIC 111 427 2.9E-37 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMK43_RS08380 40be446df514b3a954746cdc1c648adb 497 SUPERFAMILY SSF55604 8 81 8.24E-20 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS08380 40be446df514b3a954746cdc1c648adb 497 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMK43_RS08380 40be446df514b3a954746cdc1c648adb 497 PANTHER PTHR30175:SF4 1 223 1.5E-171 T 22-04-2016 AMK43_RS08380 40be446df514b3a954746cdc1c648adb 497 PANTHER PTHR30175:SF4 243 493 1.5E-171 T 22-04-2016 AMK43_RS08380 40be446df514b3a954746cdc1c648adb 497 Gene3D G3DSA:3.30.1360.60 3 82 5.3E-24 T 22-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 AMK43_RS08380 40be446df514b3a954746cdc1c648adb 497 PANTHER PTHR30175 1 223 1.5E-171 T 22-04-2016 AMK43_RS08380 40be446df514b3a954746cdc1c648adb 497 PANTHER PTHR30175 243 493 1.5E-171 T 22-04-2016 AMK43_RS08380 40be446df514b3a954746cdc1c648adb 497 Pfam PF00367 phosphotransferase system, EIIB 9 41 2.1E-14 T 22-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 AMK43_RS04620 f33f32563ea21d2441058bf5cf8bae85 160 SUPERFAMILY SSF55729 1 146 1.92E-26 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS04620 f33f32563ea21d2441058bf5cf8bae85 160 PANTHER PTHR10908 1 158 4.2E-42 T 22-04-2016 AMK43_RS04620 f33f32563ea21d2441058bf5cf8bae85 160 Pfam PF13527 Acetyltransferase (GNAT) domain 3 139 3.2E-11 T 22-04-2016 AMK43_RS04620 f33f32563ea21d2441058bf5cf8bae85 160 Gene3D G3DSA:3.40.630.30 1 157 5.1E-41 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS01280 fb1683df875f48dd1647937f513bcd59 129 Pfam PF00411 Ribosomal protein S11 19 128 1.6E-46 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK43_RS01280 fb1683df875f48dd1647937f513bcd59 129 Gene3D G3DSA:3.30.420.80 8 128 2.6E-49 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK43_RS01280 fb1683df875f48dd1647937f513bcd59 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.1E-53 T 22-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01280 fb1683df875f48dd1647937f513bcd59 129 PANTHER PTHR11759 14 129 1.5E-57 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK43_RS01280 fb1683df875f48dd1647937f513bcd59 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 31.715 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK43_RS01280 fb1683df875f48dd1647937f513bcd59 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 22-04-2016 IPR018102 Ribosomal S11, conserved site AMK43_RS01280 fb1683df875f48dd1647937f513bcd59 129 SUPERFAMILY SSF53137 14 128 6.21E-45 T 22-04-2016 AMK43_RS01280 fb1683df875f48dd1647937f513bcd59 129 PIRSF PIRSF002131 1 129 1.4E-50 T 22-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 Gene3D G3DSA:1.25.40.10 380 460 3.3E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 Gene3D G3DSA:1.25.40.10 297 357 2.6E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 Gene3D G3DSA:1.25.40.10 196 296 2.4E-5 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 SUPERFAMILY SSF81901 43 158 3.4E-11 T 22-04-2016 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 Gene3D G3DSA:1.25.40.10 45 154 1.3E-8 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 SUPERFAMILY SSF48452 428 456 3.34E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 SUPERFAMILY SSF48452 383 399 3.34E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 SUPERFAMILY SSF48452 214 352 3.34E-10 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 SMART SM00028 117 150 50.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 SMART SM00028 215 248 310.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 SMART SM00028 280 311 180.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 SMART SM00028 312 345 28.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 Pfam PF13181 Tetratricopeptide repeat 318 338 0.031 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 Pfam PF13181 Tetratricopeptide repeat 286 310 0.13 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS07110 f3df8821ee89fb83772c26ef8a820d06 471 Pfam PF13181 Tetratricopeptide repeat 118 142 0.0018 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS09300 b1f25daca2e1ba41b0ac4fe8fb9ffa6f 422 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 169 349 5.8E-30 T 22-04-2016 IPR004477 ComEC/Rec2-related protein AMK43_RS09300 b1f25daca2e1ba41b0ac4fe8fb9ffa6f 422 Pfam PF03772 Competence protein 149 420 3.8E-52 T 22-04-2016 IPR004477 ComEC/Rec2-related protein AMK43_RS09300 b1f25daca2e1ba41b0ac4fe8fb9ffa6f 422 PANTHER PTHR30619 120 422 2.3E-46 T 22-04-2016 AMK43_RS09300 b1f25daca2e1ba41b0ac4fe8fb9ffa6f 422 PANTHER PTHR30619:SF2 120 422 2.3E-46 T 22-04-2016 AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 SUPERFAMILY SSF158472 179 227 1.07E-7 T 22-04-2016 AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 Gene3D G3DSA:3.30.565.10 283 449 6.5E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 SMART SM00387 341 449 1.8E-26 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 SMART SM00388 230 296 7.8E-15 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 Pfam PF00672 HAMP domain 156 225 6.7E-11 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 Gene3D G3DSA:1.10.287.130 220 282 3.1E-12 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 296 8.3E-14 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 PANTHER PTHR24423 10 23 9.5E-71 T 22-04-2016 AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 PANTHER PTHR24423 169 449 9.5E-71 T 22-04-2016 AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 SUPERFAMILY SSF47384 213 296 1.65E-16 T 22-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 SMART SM00304 175 229 1.4E-4 T 22-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 SUPERFAMILY SSF55874 286 449 4.85E-42 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 449 1.1E-20 T 22-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 392 1.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 396 406 1.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 435 448 1.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS03650 b79bd2e10cbe86141d00676813ca50a0 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 429 1.2E-15 T 22-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 AMK43_RS03605 84b50249d0d31d9392c2442590b2d29c 108 Gene3D G3DSA:3.40.50.270 1 105 1.2E-33 T 22-04-2016 AMK43_RS03605 84b50249d0d31d9392c2442590b2d29c 108 PANTHER PTHR34581 2 107 7.4E-37 T 22-04-2016 AMK43_RS03605 84b50249d0d31d9392c2442590b2d29c 108 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 96 2.2E-16 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS03605 84b50249d0d31d9392c2442590b2d29c 108 SUPERFAMILY SSF52794 1 104 1.02E-29 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS03605 84b50249d0d31d9392c2442590b2d29c 108 PANTHER PTHR34581:SF2 2 107 7.4E-37 T 22-04-2016 AMK43_RS04775 a2915cf312f2a350f80a5970a2ee0b50 143 SUPERFAMILY SSF50800 1 140 5.23E-32 T 22-04-2016 IPR011037 Pyruvate kinase-like, insert domain AMK43_RS04775 a2915cf312f2a350f80a5970a2ee0b50 143 Gene3D G3DSA:2.40.33.20 1 141 1.0E-24 T 22-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like AMK43_RS04775 a2915cf312f2a350f80a5970a2ee0b50 143 PANTHER PTHR36930:SF1 1 141 3.8E-25 T 22-04-2016 AMK43_RS04775 a2915cf312f2a350f80a5970a2ee0b50 143 PANTHER PTHR36930 1 141 3.8E-25 T 22-04-2016 AMK43_RS05275 b34bc3ea22df61ddcae3496626868bbe 158 SUPERFAMILY SSF46785 8 126 6.82E-26 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS05275 b34bc3ea22df61ddcae3496626868bbe 158 PIRSF PIRSF019455 1 134 3.1E-36 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AMK43_RS05275 b34bc3ea22df61ddcae3496626868bbe 158 Gene3D G3DSA:1.10.10.10 11 71 3.5E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS05275 b34bc3ea22df61ddcae3496626868bbe 158 PANTHER PTHR34134 1 133 7.3E-25 T 22-04-2016 AMK43_RS05275 b34bc3ea22df61ddcae3496626868bbe 158 PANTHER PTHR34134:SF1 1 133 7.3E-25 T 22-04-2016 AMK43_RS05275 b34bc3ea22df61ddcae3496626868bbe 158 Pfam PF03965 Penicillinase repressor 9 122 2.5E-30 T 22-04-2016 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 AMK43_RS05275 b34bc3ea22df61ddcae3496626868bbe 158 TIGRFAM TIGR02698 CopY_TcrY: copper transport repressor, CopY/TcrY family 9 137 6.0E-46 T 22-04-2016 IPR014071 Copper transport repressor CopY/TcrY AMK43_RS06325 b66e990af8b60e36bfb6fb4cf8c67af1 149 Pfam PF10097 Predicted membrane protein (DUF2335) 31 67 3.1E-8 T 22-04-2016 IPR019284 Xylella phage Xfas53, Orf42 AMK43_RS06910 6d3bde12ee2eae755bb1a8e3cb125b30 279 SUPERFAMILY SSF103032 2 278 3.14E-54 T 22-04-2016 IPR015315 Protein of unknown function DUF1963 AMK43_RS06910 6d3bde12ee2eae755bb1a8e3cb125b30 279 Gene3D G3DSA:2.30.320.10 3 279 7.5E-59 T 22-04-2016 IPR015315 Protein of unknown function DUF1963 AMK43_RS06910 6d3bde12ee2eae755bb1a8e3cb125b30 279 PANTHER PTHR36436 217 279 5.2E-74 T 22-04-2016 AMK43_RS06910 6d3bde12ee2eae755bb1a8e3cb125b30 279 PANTHER PTHR36436 5 199 5.2E-74 T 22-04-2016 AMK43_RS06910 6d3bde12ee2eae755bb1a8e3cb125b30 279 PANTHER PTHR36436:SF3 217 279 5.2E-74 T 22-04-2016 AMK43_RS06910 6d3bde12ee2eae755bb1a8e3cb125b30 279 PANTHER PTHR36436:SF3 5 199 5.2E-74 T 22-04-2016 AMK43_RS06910 6d3bde12ee2eae755bb1a8e3cb125b30 279 Pfam PF09234 Domain of unknown function (DUF1963) 35 278 2.8E-50 T 22-04-2016 IPR015315 Protein of unknown function DUF1963 AMK43_RS06420 feaf2fcb1d0f07a3a4377bfbaaef2899 247 Pfam PF07090 Putative glutamine amidotransferase 3 246 5.5E-106 T 22-04-2016 IPR010768 Putative glutamine amidotransferase AMK43_RS06420 feaf2fcb1d0f07a3a4377bfbaaef2899 247 PIRSF PIRSF034405 1 247 3.2E-100 T 22-04-2016 IPR017027 Uncharacterised conserved protein UCP034405 AMK43_RS06420 feaf2fcb1d0f07a3a4377bfbaaef2899 247 PANTHER PTHR37947 3 245 7.0E-50 T 22-04-2016 AMK43_RS06420 feaf2fcb1d0f07a3a4377bfbaaef2899 247 SUPERFAMILY SSF52317 3 246 3.51E-66 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS06420 feaf2fcb1d0f07a3a4377bfbaaef2899 247 Gene3D G3DSA:3.40.50.880 2 246 4.0E-85 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS10090 5effec5518b2cc5bfdc95ccd1b04d17f 118 Pfam PF01022 Bacterial regulatory protein, arsR family 41 86 8.2E-19 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK43_RS10090 5effec5518b2cc5bfdc95ccd1b04d17f 118 SUPERFAMILY SSF46785 23 113 1.44E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS10090 5effec5518b2cc5bfdc95ccd1b04d17f 118 Gene3D G3DSA:1.10.10.10 8 116 6.7E-37 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS10090 5effec5518b2cc5bfdc95ccd1b04d17f 118 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 57 75 - T 22-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 AMK43_RS10090 5effec5518b2cc5bfdc95ccd1b04d17f 118 SMART SM00418 34 112 2.0E-32 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK43_RS10090 5effec5518b2cc5bfdc95ccd1b04d17f 118 PANTHER PTHR33154 22 114 2.0E-30 T 22-04-2016 AMK43_RS10090 5effec5518b2cc5bfdc95ccd1b04d17f 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 68 83 4.5E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK43_RS10090 5effec5518b2cc5bfdc95ccd1b04d17f 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 83 98 4.5E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK43_RS10090 5effec5518b2cc5bfdc95ccd1b04d17f 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 51 4.5E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK43_RS10090 5effec5518b2cc5bfdc95ccd1b04d17f 118 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 66 4.5E-20 T 22-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 AMK43_RS08245 89c622b25513767b936fc17ba9e08c82 296 Gene3D G3DSA:1.20.58.370 16 46 6.4E-4 T 22-04-2016 AMK43_RS08245 89c622b25513767b936fc17ba9e08c82 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 282 4.4E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS08245 89c622b25513767b936fc17ba9e08c82 296 Gene3D G3DSA:1.10.3720.10 63 285 1.7E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS08245 89c622b25513767b936fc17ba9e08c82 296 PANTHER PTHR30193:SF6 4 283 9.9E-86 T 22-04-2016 AMK43_RS08245 89c622b25513767b936fc17ba9e08c82 296 PANTHER PTHR30193 4 283 9.9E-86 T 22-04-2016 AMK43_RS08245 89c622b25513767b936fc17ba9e08c82 296 SUPERFAMILY SSF161098 57 282 2.88E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS04925 91cfad93cd87f8e7f9e18798a0263bdc 424 SUPERFAMILY SSF54534 100 240 1.39E-30 T 22-04-2016 AMK43_RS04925 91cfad93cd87f8e7f9e18798a0263bdc 424 Gene3D G3DSA:3.30.70.1050 3 115 6.1E-22 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMK43_RS04925 91cfad93cd87f8e7f9e18798a0263bdc 424 PANTHER PTHR30560 35 424 3.5E-94 T 22-04-2016 AMK43_RS04925 91cfad93cd87f8e7f9e18798a0263bdc 424 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 259 423 1.2E-40 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AMK43_RS04925 91cfad93cd87f8e7f9e18798a0263bdc 424 Gene3D G3DSA:3.10.50.40 148 214 6.4E-5 T 22-04-2016 AMK43_RS04925 91cfad93cd87f8e7f9e18798a0263bdc 424 PIRSF PIRSF003095 1 424 7.8E-111 T 22-04-2016 IPR005215 Trigger factor GO:0015031 AMK43_RS04925 91cfad93cd87f8e7f9e18798a0263bdc 424 Hamap MF_00303 Trigger factor [tig]. 1 419 18.681 T 22-04-2016 IPR005215 Trigger factor GO:0015031 AMK43_RS04925 91cfad93cd87f8e7f9e18798a0263bdc 424 Pfam PF05697 Bacterial trigger factor protein (TF) 3 140 3.8E-29 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMK43_RS04925 91cfad93cd87f8e7f9e18798a0263bdc 424 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 155 236 5.0E-12 T 22-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 AMK43_RS04925 91cfad93cd87f8e7f9e18798a0263bdc 424 SUPERFAMILY SSF109998 247 423 2.75E-38 T 22-04-2016 IPR027304 Trigger factor/SurA domain AMK43_RS04925 91cfad93cd87f8e7f9e18798a0263bdc 424 Gene3D G3DSA:1.10.3120.10 215 390 1.7E-55 T 22-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 AMK43_RS04925 91cfad93cd87f8e7f9e18798a0263bdc 424 SUPERFAMILY SSF102735 3 126 2.62E-24 T 22-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 AMK43_RS04925 91cfad93cd87f8e7f9e18798a0263bdc 424 TIGRFAM TIGR00115 tig: trigger factor 30 422 1.2E-121 T 22-04-2016 IPR005215 Trigger factor GO:0015031 AMK43_RS03580 46dd1d9a363d77d700282dcda30117d7 235 SMART SM00345 7 66 7.1E-8 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK43_RS03580 46dd1d9a363d77d700282dcda30117d7 235 PANTHER PTHR11751 118 140 4.2E-18 T 22-04-2016 AMK43_RS03580 46dd1d9a363d77d700282dcda30117d7 235 PANTHER PTHR11751 1 69 4.2E-18 T 22-04-2016 AMK43_RS03580 46dd1d9a363d77d700282dcda30117d7 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 62 4.7E-13 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK43_RS03580 46dd1d9a363d77d700282dcda30117d7 235 Gene3D G3DSA:1.10.10.10 2 62 5.1E-20 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03580 46dd1d9a363d77d700282dcda30117d7 235 SUPERFAMILY SSF46785 1 75 5.46E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03580 46dd1d9a363d77d700282dcda30117d7 235 Pfam PF07702 UTRA domain 90 227 1.9E-25 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMK43_RS03580 46dd1d9a363d77d700282dcda30117d7 235 SMART SM00866 89 228 6.9E-19 T 22-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 AMK43_RS03580 46dd1d9a363d77d700282dcda30117d7 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 1.2E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK43_RS03580 46dd1d9a363d77d700282dcda30117d7 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 1.2E-5 T 22-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 AMK43_RS03580 46dd1d9a363d77d700282dcda30117d7 235 PANTHER PTHR11751:SF347 118 140 4.2E-18 T 22-04-2016 AMK43_RS03580 46dd1d9a363d77d700282dcda30117d7 235 PANTHER PTHR11751:SF347 1 69 4.2E-18 T 22-04-2016 AMK43_RS03580 46dd1d9a363d77d700282dcda30117d7 235 Gene3D G3DSA:3.40.1410.10 63 235 6.0E-41 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AMK43_RS03580 46dd1d9a363d77d700282dcda30117d7 235 SUPERFAMILY SSF64288 76 232 3.93E-32 T 22-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain AMK43_RS03925 b8525a114c1c0d8c867c63c83c5ec035 138 SUPERFAMILY SSF50331 4 69 1.29E-15 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK43_RS03925 b8525a114c1c0d8c867c63c83c5ec035 138 Pfam PF03459 TOBE domain 75 136 3.0E-14 T 22-04-2016 IPR005116 Transport-associated OB, type 1 AMK43_RS03925 b8525a114c1c0d8c867c63c83c5ec035 138 Pfam PF03459 TOBE domain 5 66 2.1E-8 T 22-04-2016 IPR005116 Transport-associated OB, type 1 AMK43_RS03925 b8525a114c1c0d8c867c63c83c5ec035 138 SUPERFAMILY SSF50331 74 137 1.91E-16 T 22-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal AMK43_RS03925 b8525a114c1c0d8c867c63c83c5ec035 138 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 74 137 3.5E-19 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 AMK43_RS03925 b8525a114c1c0d8c867c63c83c5ec035 138 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 4 68 6.5E-17 T 22-04-2016 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 AMK43_RS03925 b8525a114c1c0d8c867c63c83c5ec035 138 Gene3D G3DSA:2.40.50.100 74 137 3.3E-20 T 22-04-2016 AMK43_RS03925 b8525a114c1c0d8c867c63c83c5ec035 138 Gene3D G3DSA:2.40.50.100 4 67 2.1E-19 T 22-04-2016 AMK43_RS10975 f0b4c78affd7107daa2066afd77a4298 126 Pfam PF05713 Bacterial mobilisation protein (MobC) 74 103 1.8E-5 T 22-04-2016 IPR008687 Bacterial mobilisation AMK43_RS10425 3aa2063f05c32a71dbad2b41fc4ce34d 363 PANTHER PTHR30349:SF11 62 354 2.4E-24 T 22-04-2016 AMK43_RS10425 3aa2063f05c32a71dbad2b41fc4ce34d 363 Gene3D G3DSA:1.10.443.10 171 343 9.9E-32 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK43_RS10425 3aa2063f05c32a71dbad2b41fc4ce34d 363 Pfam PF00589 Phage integrase family 172 336 7.7E-24 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK43_RS10425 3aa2063f05c32a71dbad2b41fc4ce34d 363 PANTHER PTHR30349 62 354 2.4E-24 T 22-04-2016 AMK43_RS10425 3aa2063f05c32a71dbad2b41fc4ce34d 363 SUPERFAMILY SSF56349 65 340 1.59E-44 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK43_RS04375 b2fd9e2fecc7659be80da096e1464560 120 Pfam PF01725 Ham1 family 3 102 6.0E-23 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMK43_RS04375 b2fd9e2fecc7659be80da096e1464560 120 SUPERFAMILY SSF52972 1 105 1.52E-29 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMK43_RS04375 b2fd9e2fecc7659be80da096e1464560 120 PANTHER PTHR11067 1 100 1.2E-24 T 22-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 AMK43_RS04375 b2fd9e2fecc7659be80da096e1464560 120 PANTHER PTHR11067:SF9 1 100 1.2E-24 T 22-04-2016 AMK43_RS04375 b2fd9e2fecc7659be80da096e1464560 120 Gene3D G3DSA:3.90.950.10 1 102 5.0E-34 T 22-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like AMK43_RS02175 41927f04ed88f7a760df2c24db96bc32 201 Pfam PF01300 Telomere recombination 10 188 3.1E-43 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 AMK43_RS02175 41927f04ed88f7a760df2c24db96bc32 201 PANTHER PTHR17490 5 199 7.6E-53 T 22-04-2016 AMK43_RS02175 41927f04ed88f7a760df2c24db96bc32 201 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 3 199 1.9E-48 T 22-04-2016 IPR006070 YrdC-like domain GO:0003725 AMK43_RS02175 41927f04ed88f7a760df2c24db96bc32 201 Gene3D G3DSA:3.90.870.10 3 195 2.6E-53 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK43_RS02175 41927f04ed88f7a760df2c24db96bc32 201 SUPERFAMILY SSF55821 5 199 4.88E-46 T 22-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain AMK43_RS09800 041caf497f74ee0e3902e778f087230b 202 PANTHER PTHR18895 17 199 6.7E-59 T 22-04-2016 AMK43_RS09800 041caf497f74ee0e3902e778f087230b 202 SUPERFAMILY SSF53335 6 200 4.63E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS09800 041caf497f74ee0e3902e778f087230b 202 Pfam PF05175 Methyltransferase small domain 27 198 1.4E-44 T 22-04-2016 IPR007848 Methyltransferase small domain GO:0008168 AMK43_RS09800 041caf497f74ee0e3902e778f087230b 202 Gene3D G3DSA:3.40.50.150 16 191 3.8E-34 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS09800 041caf497f74ee0e3902e778f087230b 202 PANTHER PTHR18895:SF72 17 199 6.7E-59 T 22-04-2016 AMK43_RS08105 c16607e82311655992926199371ccffe 572 SUPERFAMILY SSF52467 193 361 2.18E-64 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK43_RS08105 c16607e82311655992926199371ccffe 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 430 449 - T 22-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 AMK43_RS08105 c16607e82311655992926199371ccffe 572 Gene3D G3DSA:3.40.50.970 355 556 8.7E-75 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS08105 c16607e82311655992926199371ccffe 572 PANTHER PTHR18968 4 566 0.0 T 22-04-2016 AMK43_RS08105 c16607e82311655992926199371ccffe 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 541 2.2E-47 T 22-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 AMK43_RS08105 c16607e82311655992926199371ccffe 572 Gene3D G3DSA:3.40.50.1220 195 354 2.9E-68 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK43_RS08105 c16607e82311655992926199371ccffe 572 Gene3D G3DSA:3.40.50.970 5 177 4.0E-70 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS08105 c16607e82311655992926199371ccffe 572 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 7 565 8.4E-244 T 22-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK43_RS08105 c16607e82311655992926199371ccffe 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 173 3.6E-54 T 22-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 AMK43_RS08105 c16607e82311655992926199371ccffe 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 334 1.8E-47 T 22-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 AMK43_RS08105 c16607e82311655992926199371ccffe 572 SUPERFAMILY SSF52518 373 565 2.03E-66 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS08105 c16607e82311655992926199371ccffe 572 SUPERFAMILY SSF52518 4 176 1.03E-60 T 22-04-2016 IPR029061 Thiamin diphosphate-binding fold AMK43_RS08105 c16607e82311655992926199371ccffe 572 PANTHER PTHR18968:SF116 4 566 0.0 T 22-04-2016 AMK43_RS08280 f62ba402357afdfba870543173aaaf21 330 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 4 326 19.147 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 AMK43_RS08280 f62ba402357afdfba870543173aaaf21 330 Pfam PF01867 CRISPR associated protein Cas1 6 285 8.7E-90 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 AMK43_RS08280 f62ba402357afdfba870543173aaaf21 330 PANTHER PTHR34353:SF1 1 330 6.7E-163 T 22-04-2016 AMK43_RS08280 f62ba402357afdfba870543173aaaf21 330 PANTHER PTHR34353 1 330 6.7E-163 T 22-04-2016 AMK43_RS08280 f62ba402357afdfba870543173aaaf21 330 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 6 324 2.0E-94 T 22-04-2016 IPR002729 CRISPR-associated protein Cas1 AMK43_RS08280 f62ba402357afdfba870543173aaaf21 330 TIGRFAM TIGR03641 cas1_HMARI: CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP 4 330 3.2E-129 T 22-04-2016 IPR019858 CRISPR-associated protein Cas1, HMARI/TNEAP subtype AMK43_RS05180 1e42b64a13f32b9ff14caff39b208238 141 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 124 4.0E-33 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMK43_RS05180 1e42b64a13f32b9ff14caff39b208238 141 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 141 43.52 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMK43_RS05180 1e42b64a13f32b9ff14caff39b208238 141 Pfam PF02381 MraZ protein, putative antitoxin-like 73 127 1.9E-15 T 22-04-2016 IPR020603 MraZ domain AMK43_RS05180 1e42b64a13f32b9ff14caff39b208238 141 Pfam PF02381 MraZ protein, putative antitoxin-like 1 71 6.2E-19 T 22-04-2016 IPR020603 MraZ domain AMK43_RS05180 1e42b64a13f32b9ff14caff39b208238 141 SUPERFAMILY SSF89447 1 135 7.98E-44 T 22-04-2016 AMK43_RS05180 1e42b64a13f32b9ff14caff39b208238 141 PANTHER PTHR34701 2 140 1.6E-44 T 22-04-2016 AMK43_RS05180 1e42b64a13f32b9ff14caff39b208238 141 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 138 1.8E-40 T 22-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 AMK43_RS08195 04950bd349eea292ef9a292398344e6f 551 PIRSF PIRSF000076 3 551 3.0E-252 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AMK43_RS08195 04950bd349eea292ef9a292398344e6f 551 Gene3D G3DSA:3.40.50.2030 380 548 1.2E-72 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AMK43_RS08195 04950bd349eea292ef9a292398344e6f 551 Gene3D G3DSA:1.20.1270.20 154 227 1.5E-26 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AMK43_RS08195 04950bd349eea292ef9a292398344e6f 551 Hamap MF_00069 Hydroxylamine reductase [hcp]. 3 551 22.724 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AMK43_RS08195 04950bd349eea292ef9a292398344e6f 551 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 3 549 5.7E-219 T 22-04-2016 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 AMK43_RS08195 04950bd349eea292ef9a292398344e6f 551 PANTHER PTHR30109 1 549 6.6E-277 T 22-04-2016 AMK43_RS08195 04950bd349eea292ef9a292398344e6f 551 Pfam PF03063 Prismane/CO dehydrogenase family 3 547 1.3E-171 T 22-04-2016 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 AMK43_RS08195 04950bd349eea292ef9a292398344e6f 551 Gene3D G3DSA:3.40.50.2030 230 379 8.7E-67 T 22-04-2016 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AMK43_RS08195 04950bd349eea292ef9a292398344e6f 551 PANTHER PTHR30109:SF0 1 549 6.6E-277 T 22-04-2016 AMK43_RS08195 04950bd349eea292ef9a292398344e6f 551 SUPERFAMILY SSF56821 3 549 7.78E-202 T 22-04-2016 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 AMK43_RS08195 04950bd349eea292ef9a292398344e6f 551 Gene3D G3DSA:1.20.1270.20 1 153 4.4E-41 T 22-04-2016 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 AMK43_RS07730 cf1d79747eb46c26e8eae19f6e06da22 221 SUPERFAMILY SSF54211 1 171 8.1E-38 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS07730 cf1d79747eb46c26e8eae19f6e06da22 221 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 1 220 7.2E-105 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 AMK43_RS07730 cf1d79747eb46c26e8eae19f6e06da22 221 Hamap MF_00564 Ribonuclease PH [rph]. 1 221 40.067 T 22-04-2016 IPR002381 Ribonuclease phosphorolytic, bacterial-type GO:0000049|GO:0004549|GO:0008033 AMK43_RS07730 cf1d79747eb46c26e8eae19f6e06da22 221 PANTHER PTHR11953:SF0 1 221 1.2E-68 T 22-04-2016 AMK43_RS07730 cf1d79747eb46c26e8eae19f6e06da22 221 ProSitePatterns PS01277 Ribonuclease PH signature. 106 118 - T 22-04-2016 IPR018336 Ribonuclease PH, conserved site AMK43_RS07730 cf1d79747eb46c26e8eae19f6e06da22 221 Gene3D G3DSA:3.30.230.70 2 219 6.7E-28 T 22-04-2016 IPR027408 PNPase/RNase PH domain AMK43_RS07730 cf1d79747eb46c26e8eae19f6e06da22 221 Pfam PF03725 3' exoribonuclease family, domain 2 149 213 1.7E-12 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK43_RS07730 cf1d79747eb46c26e8eae19f6e06da22 221 Pfam PF01138 3' exoribonuclease family, domain 1 1 128 3.9E-22 T 22-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 AMK43_RS07730 cf1d79747eb46c26e8eae19f6e06da22 221 PANTHER PTHR11953 1 221 1.2E-68 T 22-04-2016 AMK43_RS07730 cf1d79747eb46c26e8eae19f6e06da22 221 SUPERFAMILY SSF55666 142 220 7.59E-20 T 22-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 AMK43_RS00955 2d2d7a65a175994d84eadd44b7d0bca1 195 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 43 187 9.0E-21 T 22-04-2016 IPR018958 SMI1/KNR4-like domain AMK43_RS00955 2d2d7a65a175994d84eadd44b7d0bca1 195 Gene3D G3DSA:3.40.1580.10 22 98 6.1E-23 T 22-04-2016 IPR018958 SMI1/KNR4-like domain AMK43_RS00955 2d2d7a65a175994d84eadd44b7d0bca1 195 Gene3D G3DSA:3.40.1580.10 135 193 6.1E-23 T 22-04-2016 IPR018958 SMI1/KNR4-like domain AMK43_RS00955 2d2d7a65a175994d84eadd44b7d0bca1 195 SMART SM00860 40 189 4.5E-6 T 22-04-2016 IPR018958 SMI1/KNR4-like domain AMK43_RS00955 2d2d7a65a175994d84eadd44b7d0bca1 195 SUPERFAMILY SSF160631 34 85 1.24E-17 T 22-04-2016 AMK43_RS00955 2d2d7a65a175994d84eadd44b7d0bca1 195 SUPERFAMILY SSF160631 120 193 1.24E-17 T 22-04-2016 AMK43_RS02170 0e2df42c7c72b850b1d16194c4753c85 330 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 13 321 7.1E-121 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMK43_RS02170 0e2df42c7c72b850b1d16194c4753c85 330 PANTHER PTHR10210 1 326 2.3E-186 T 22-04-2016 AMK43_RS02170 0e2df42c7c72b850b1d16194c4753c85 330 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 12 321 49.807 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMK43_RS02170 0e2df42c7c72b850b1d16194c4753c85 330 Gene3D G3DSA:3.40.50.2020 168 293 1.2E-53 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS02170 0e2df42c7c72b850b1d16194c4753c85 330 PANTHER PTHR10210:SF41 1 326 2.3E-186 T 22-04-2016 AMK43_RS02170 0e2df42c7c72b850b1d16194c4753c85 330 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 12 128 9.7E-48 T 22-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMK43_RS02170 0e2df42c7c72b850b1d16194c4753c85 330 Gene3D G3DSA:3.40.50.2020 7 167 1.3E-72 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS02170 0e2df42c7c72b850b1d16194c4753c85 330 SUPERFAMILY SSF53271 77 310 1.1E-63 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS02170 0e2df42c7c72b850b1d16194c4753c85 330 SMART SM01400 12 128 2.2E-75 T 22-04-2016 AMK43_RS02170 0e2df42c7c72b850b1d16194c4753c85 330 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 136 151 - T 22-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 AMK43_RS02170 0e2df42c7c72b850b1d16194c4753c85 330 Pfam PF14572 Phosphoribosyl synthetase-associated domain 212 320 2.0E-25 T 22-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 Pfam PF00145 C-5 cytosine-specific DNA methylase 111 451 7.8E-70 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 122 450 5.8E-74 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 Gene3D G3DSA:3.90.120.10 270 355 9.4E-20 T 22-04-2016 AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 Gene3D G3DSA:3.90.120.10 396 438 9.4E-20 T 22-04-2016 AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 PANTHER PTHR10629:SF31 152 453 1.8E-34 T 22-04-2016 AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 PANTHER PTHR10629:SF31 1 87 1.8E-34 T 22-04-2016 AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 SUPERFAMILY SSF53335 129 288 5.15E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 SUPERFAMILY SSF53335 364 454 5.15E-65 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 432 450 - T 22-04-2016 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 240 253 1.1E-8 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 194 208 1.1E-8 T 22-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 PANTHER PTHR10629 152 453 1.8E-34 T 22-04-2016 AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 PANTHER PTHR10629 1 87 1.8E-34 T 22-04-2016 AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 155 167 - T 22-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 AMK43_RS00600 35a0ba601c80b89e5c66038107e7b20e 457 Gene3D G3DSA:3.40.50.150 133 269 1.3E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07035 da65b7dd1d1b348b75e3180d8cde2754 97 Gene3D G3DSA:2.40.50.100 29 92 2.6E-30 T 22-04-2016 AMK43_RS07035 da65b7dd1d1b348b75e3180d8cde2754 97 ProSitePatterns PS00831 Ribosomal protein L27 signature. 43 57 - T 22-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS07035 da65b7dd1d1b348b75e3180d8cde2754 97 Pfam PF01016 Ribosomal L27 protein 11 90 5.9E-37 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS07035 da65b7dd1d1b348b75e3180d8cde2754 97 PANTHER PTHR15893 5 96 1.9E-48 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS07035 da65b7dd1d1b348b75e3180d8cde2754 97 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 10 93 27.551 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS07035 da65b7dd1d1b348b75e3180d8cde2754 97 SUPERFAMILY SSF110324 11 91 4.53E-33 T 22-04-2016 AMK43_RS07035 da65b7dd1d1b348b75e3180d8cde2754 97 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 37 80 6.0E-15 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS07035 da65b7dd1d1b348b75e3180d8cde2754 97 TIGRFAM TIGR00062 L27: ribosomal protein bL27 10 90 3.6E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS07035 da65b7dd1d1b348b75e3180d8cde2754 97 PRINTS PR00063 Ribosomal protein L27 signature 63 87 1.2E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS07035 da65b7dd1d1b348b75e3180d8cde2754 97 PRINTS PR00063 Ribosomal protein L27 signature 13 37 1.2E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS07035 da65b7dd1d1b348b75e3180d8cde2754 97 PRINTS PR00063 Ribosomal protein L27 signature 38 62 1.2E-38 T 22-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS05375 bc698edee9761c19670540801bed9a89 854 Gene3D G3DSA:3.40.50.300 289 473 9.0E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05375 bc698edee9761c19670540801bed9a89 854 Gene3D G3DSA:3.40.50.300 565 759 4.9E-27 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05375 bc698edee9761c19670540801bed9a89 854 SMART SM00382 322 461 8.2E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS05375 bc698edee9761c19670540801bed9a89 854 SMART SM00382 604 746 4.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS05375 bc698edee9761c19670540801bed9a89 854 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 608 742 4.7E-20 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK43_RS05375 bc698edee9761c19670540801bed9a89 854 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 326 458 2.5E-34 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK43_RS05375 bc698edee9761c19670540801bed9a89 854 ProSitePatterns PS00674 AAA-protein family signature. 431 450 - T 22-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 AMK43_RS05375 bc698edee9761c19670540801bed9a89 854 SUPERFAMILY SSF52540 566 779 3.04E-26 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05375 bc698edee9761c19670540801bed9a89 854 PANTHER PTHR23077 666 760 6.6E-49 T 22-04-2016 AMK43_RS05375 bc698edee9761c19670540801bed9a89 854 PANTHER PTHR23077 32 80 6.6E-49 T 22-04-2016 AMK43_RS05375 bc698edee9761c19670540801bed9a89 854 PANTHER PTHR23077 288 628 6.6E-49 T 22-04-2016 AMK43_RS05375 bc698edee9761c19670540801bed9a89 854 SUPERFAMILY SSF52540 289 535 4.46E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11230 7e630600b575e76333a4b84ebd1600dc 284 Gene3D G3DSA:3.10.50.40 149 266 8.7E-14 T 22-04-2016 AMK43_RS11230 7e630600b575e76333a4b84ebd1600dc 284 PANTHER PTHR10657 34 284 3.9E-18 T 22-04-2016 AMK43_RS11230 7e630600b575e76333a4b84ebd1600dc 284 Pfam PF13145 PPIC-type PPIASE domain 126 255 1.6E-17 T 22-04-2016 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 AMK43_RS11230 7e630600b575e76333a4b84ebd1600dc 284 PANTHER PTHR10657:SF11 34 284 3.9E-18 T 22-04-2016 AMK43_RS11230 7e630600b575e76333a4b84ebd1600dc 284 SUPERFAMILY SSF54534 146 244 7.2E-9 T 22-04-2016 AMK43_RS11230 7e630600b575e76333a4b84ebd1600dc 284 SUPERFAMILY SSF109998 39 166 1.31E-8 T 22-04-2016 IPR027304 Trigger factor/SurA domain AMK43_RS02990 3b78fb6f5e66f6cf2a1b9f493cbfe30f 304 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 7 295 26.505 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AMK43_RS02990 3b78fb6f5e66f6cf2a1b9f493cbfe30f 304 Pfam PF01715 IPP transferase 40 279 3.2E-71 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AMK43_RS02990 3b78fb6f5e66f6cf2a1b9f493cbfe30f 304 SUPERFAMILY SSF52540 6 70 1.13E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02990 3b78fb6f5e66f6cf2a1b9f493cbfe30f 304 PANTHER PTHR11088 1 286 9.8E-80 T 22-04-2016 AMK43_RS02990 3b78fb6f5e66f6cf2a1b9f493cbfe30f 304 SUPERFAMILY SSF52540 9 157 5.8E-20 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02990 3b78fb6f5e66f6cf2a1b9f493cbfe30f 304 Gene3D G3DSA:1.10.287.890 197 277 6.0E-27 T 22-04-2016 AMK43_RS02990 3b78fb6f5e66f6cf2a1b9f493cbfe30f 304 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 282 1.6E-81 T 22-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 AMK43_RS02990 3b78fb6f5e66f6cf2a1b9f493cbfe30f 304 Gene3D G3DSA:3.40.50.300 7 169 9.3E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02990 3b78fb6f5e66f6cf2a1b9f493cbfe30f 304 SUPERFAMILY SSF52540 159 261 1.13E-12 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08235 25c9f978f386224e8d2d7bcce0e7f5f6 229 SMART SM00849 18 208 6.3E-4 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS08235 25c9f978f386224e8d2d7bcce0e7f5f6 229 Gene3D G3DSA:3.60.15.10 3 211 2.0E-18 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS08235 25c9f978f386224e8d2d7bcce0e7f5f6 229 SUPERFAMILY SSF56281 3 214 6.16E-24 T 22-04-2016 IPR001279 Metallo-beta-lactamase AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 PANTHER PTHR11575:SF6 5 545 1.7E-94 T 22-04-2016 AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 Pfam PF02872 5'-nucleotidase, C-terminal domain 337 483 1.1E-31 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 SUPERFAMILY SSF55816 337 538 1.44E-42 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 PRINTS PR01607 Apyrase family signature 379 402 9.4E-21 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 PRINTS PR01607 Apyrase family signature 21 39 9.4E-21 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 PRINTS PR01607 Apyrase family signature 466 485 9.4E-21 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 PRINTS PR01607 Apyrase family signature 251 271 9.4E-21 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 PRINTS PR01607 Apyrase family signature 200 217 9.4E-21 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 PRINTS PR01607 Apyrase family signature 225 248 9.4E-21 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 ProSitePatterns PS00786 5'-nucleotidase signature 2. 102 113 - T 22-04-2016 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 Gene3D G3DSA:3.90.780.10 338 538 3.5E-45 T 22-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 Gene3D G3DSA:3.60.21.10 18 321 1.0E-72 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 SUPERFAMILY SSF56300 15 320 4.68E-70 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 Pfam PF00149 Calcineurin-like phosphoesterase 25 241 1.8E-11 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK43_RS08795 2d7d4a025a5d96a4a87a665cdf0637c5 580 PANTHER PTHR11575 5 545 1.7E-94 T 22-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 AMK43_RS00400 a41f09381d33d4d870519e27aff96577 208 Gene3D G3DSA:4.10.960.10 73 155 2.3E-25 T 22-04-2016 AMK43_RS00400 a41f09381d33d4d870519e27aff96577 208 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 2 202 1.7E-81 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00400 a41f09381d33d4d870519e27aff96577 208 ProSitePatterns PS00474 Ribosomal protein L3 signature. 98 121 - T 22-04-2016 IPR019926 Ribosomal protein L3, conserved site AMK43_RS00400 a41f09381d33d4d870519e27aff96577 208 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 205 35.952 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00400 a41f09381d33d4d870519e27aff96577 208 Gene3D G3DSA:2.40.30.10 156 207 7.6E-11 T 22-04-2016 AMK43_RS00400 a41f09381d33d4d870519e27aff96577 208 Gene3D G3DSA:2.40.30.10 2 29 7.6E-11 T 22-04-2016 AMK43_RS00400 a41f09381d33d4d870519e27aff96577 208 Pfam PF00297 Ribosomal protein L3 95 177 3.9E-10 T 22-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00400 a41f09381d33d4d870519e27aff96577 208 PANTHER PTHR11229 2 206 3.4E-97 T 22-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00400 a41f09381d33d4d870519e27aff96577 208 SUPERFAMILY SSF50447 2 207 3.18E-72 T 22-04-2016 IPR009000 Translation protein, beta-barrel domain AMK43_RS07850 656f1061c18fdb8b4bbb2d8c04ed664e 336 PIRSF PIRSF001555 8 336 1.4E-158 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 AMK43_RS07850 656f1061c18fdb8b4bbb2d8c04ed664e 336 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 22 328 2.4E-102 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 AMK43_RS07850 656f1061c18fdb8b4bbb2d8c04ed664e 336 Gene3D G3DSA:3.30.930.10 14 331 4.6E-155 T 22-04-2016 AMK43_RS07850 656f1061c18fdb8b4bbb2d8c04ed664e 336 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 12 332 50.147 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 AMK43_RS07850 656f1061c18fdb8b4bbb2d8c04ed664e 336 Pfam PF03590 Aspartate-ammonia ligase 21 246 1.2E-107 T 22-04-2016 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1|UniPathway: UPA00134 AMK43_RS07850 656f1061c18fdb8b4bbb2d8c04ed664e 336 PANTHER PTHR30073 6 336 2.7E-194 T 22-04-2016 AMK43_RS07850 656f1061c18fdb8b4bbb2d8c04ed664e 336 SUPERFAMILY SSF55681 16 329 2.45E-94 T 22-04-2016 AMK43_RS07850 656f1061c18fdb8b4bbb2d8c04ed664e 336 PANTHER PTHR30073:SF5 6 336 2.7E-194 T 22-04-2016 AMK43_RS01250 66664366f38035bbcd80bda59c663ae0 214 Pfam PF03575 Peptidase family S51 4 201 1.0E-41 T 22-04-2016 IPR005320 Peptidase S51 GO:0006508|GO:0008236 AMK43_RS01250 66664366f38035bbcd80bda59c663ae0 214 Gene3D G3DSA:3.40.50.880 4 205 3.2E-46 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS01250 66664366f38035bbcd80bda59c663ae0 214 PANTHER PTHR20842 7 214 3.2E-30 T 22-04-2016 AMK43_RS01250 66664366f38035bbcd80bda59c663ae0 214 SUPERFAMILY SSF52317 4 201 3.96E-25 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS00770 d55cc10358063d512bf1effb1e335fe8 336 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 5 332 3.2E-104 T 22-04-2016 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 AMK43_RS00770 d55cc10358063d512bf1effb1e335fe8 336 Pfam PF02277 Phosphoribosyltransferase 5 331 1.2E-109 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 AMK43_RS00770 d55cc10358063d512bf1effb1e335fe8 336 PANTHER PTHR21712 1 335 6.5E-91 T 22-04-2016 AMK43_RS00770 d55cc10358063d512bf1effb1e335fe8 336 PANTHER PTHR21712:SF4 1 335 6.5E-91 T 22-04-2016 AMK43_RS00770 d55cc10358063d512bf1effb1e335fe8 336 SUPERFAMILY SSF52733 7 333 2.22E-90 T 22-04-2016 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 AMK43_RS00770 d55cc10358063d512bf1effb1e335fe8 336 Gene3D G3DSA:3.40.50.10210 52 320 2.1E-98 T 22-04-2016 AMK43_RS00770 d55cc10358063d512bf1effb1e335fe8 336 Gene3D G3DSA:1.10.1610.10 5 51 5.6E-15 T 22-04-2016 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00061 AMK43_RS09680 c332d554213aae7052b890cd49eb7d7a 216 Pfam PF00005 ABC transporter 19 170 1.5E-31 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS09680 c332d554213aae7052b890cd49eb7d7a 216 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS09680 c332d554213aae7052b890cd49eb7d7a 216 SMART SM00382 28 215 3.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS09680 c332d554213aae7052b890cd49eb7d7a 216 PANTHER PTHR24220 5 214 3.1E-72 T 22-04-2016 AMK43_RS09680 c332d554213aae7052b890cd49eb7d7a 216 Gene3D G3DSA:3.40.50.300 3 214 7.0E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09680 c332d554213aae7052b890cd49eb7d7a 216 SUPERFAMILY SSF52540 3 214 9.76E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10025 8c5a3c89a7c508f6ee313a8f9302278a 212 PANTHER PTHR31272:SF4 1 212 1.8E-71 T 22-04-2016 AMK43_RS10025 8c5a3c89a7c508f6ee313a8f9302278a 212 PANTHER PTHR31272 1 212 1.8E-71 T 22-04-2016 AMK43_RS10025 8c5a3c89a7c508f6ee313a8f9302278a 212 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 11 209 2.3E-60 T 22-04-2016 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 AMK43_RS07575 a45b51d91e111749c1effa4e01098f15 228 Gene3D G3DSA:3.40.50.1000 3 23 8.8E-41 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS07575 a45b51d91e111749c1effa4e01098f15 228 Gene3D G3DSA:3.40.50.1000 96 218 8.8E-41 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS07575 a45b51d91e111749c1effa4e01098f15 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 59 191 9.0E-15 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK43_RS07575 a45b51d91e111749c1effa4e01098f15 228 PANTHER PTHR18901 5 218 3.4E-52 T 22-04-2016 AMK43_RS07575 a45b51d91e111749c1effa4e01098f15 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 188 2.5E-32 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS07575 a45b51d91e111749c1effa4e01098f15 228 SUPERFAMILY SSF56784 8 217 1.9E-47 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS11215 d976da82e9ba85a48de63fe7b3d33a74 91 SUPERFAMILY SSF160537 1 87 1.96E-31 T 22-04-2016 IPR007170 Stage V sporulation protein G GO:0030435 AMK43_RS11215 d976da82e9ba85a48de63fe7b3d33a74 91 Gene3D G3DSA:3.30.1120.40 1 86 6.1E-35 T 22-04-2016 IPR007170 Stage V sporulation protein G GO:0030435 AMK43_RS11215 d976da82e9ba85a48de63fe7b3d33a74 91 PANTHER PTHR38429 2 91 5.8E-40 T 22-04-2016 AMK43_RS11215 d976da82e9ba85a48de63fe7b3d33a74 91 Pfam PF04026 SpoVG 1 85 1.2E-34 T 22-04-2016 IPR007170 Stage V sporulation protein G GO:0030435 AMK43_RS11215 d976da82e9ba85a48de63fe7b3d33a74 91 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 90 24.977 T 22-04-2016 IPR007170 Stage V sporulation protein G GO:0030435 AMK43_RS00565 324c35bb1d1265e8b553fa14e62f9fc0 213 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 8 175 7.5E-18 T 22-04-2016 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like GO:0008152|GO:0016791 AMK43_RS00565 324c35bb1d1265e8b553fa14e62f9fc0 213 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 174 3.5E-9 T 22-04-2016 AMK43_RS00565 324c35bb1d1265e8b553fa14e62f9fc0 213 SUPERFAMILY SSF56784 4 210 1.8E-31 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS00565 324c35bb1d1265e8b553fa14e62f9fc0 213 Gene3D G3DSA:3.40.50.1000 8 23 3.7E-11 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS00565 324c35bb1d1265e8b553fa14e62f9fc0 213 Gene3D G3DSA:3.40.50.1000 73 194 3.7E-11 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS00565 324c35bb1d1265e8b553fa14e62f9fc0 213 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 6 183 5.3E-24 T 22-04-2016 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 AMK43_RS00995 8ac2cfa2a4686adc7344500e88a6a9e8 189 SUPERFAMILY SSF52540 3 189 5.9E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00995 8ac2cfa2a4686adc7344500e88a6a9e8 189 Gene3D G3DSA:3.40.50.300 4 189 2.2E-55 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00995 8ac2cfa2a4686adc7344500e88a6a9e8 189 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 4 188 4.2E-54 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 AMK43_RS00995 8ac2cfa2a4686adc7344500e88a6a9e8 189 PIRSF PIRSF006135 2 189 1.6E-54 T 22-04-2016 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269|UniPathway: UPA00148|UniPathway: UPA00148 AMK43_RS00995 8ac2cfa2a4686adc7344500e88a6a9e8 189 PANTHER PTHR34848 1 189 4.1E-59 T 22-04-2016 AMK43_RS05435 eedd0534a82634f437edab63c12e8f45 74 PANTHER PTHR20863 2 73 4.1E-30 T 22-04-2016 AMK43_RS05435 eedd0534a82634f437edab63c12e8f45 74 ProSitePatterns PS00012 Phosphopantetheine attachment site. 29 44 - T 22-04-2016 IPR006162 Phosphopantetheine attachment site AMK43_RS05435 eedd0534a82634f437edab63c12e8f45 74 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 2 74 5.5E-35 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AMK43_RS05435 eedd0534a82634f437edab63c12e8f45 74 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 31 73 3.0E-10 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AMK43_RS05435 eedd0534a82634f437edab63c12e8f45 74 Gene3D G3DSA:1.10.1200.10 2 73 1.4E-33 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK43_RS05435 eedd0534a82634f437edab63c12e8f45 74 Hamap MF_01217 Acyl carrier protein [acpP]. 1 74 21.696 T 22-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 AMK43_RS05435 eedd0534a82634f437edab63c12e8f45 74 SUPERFAMILY SSF47336 2 73 5.89E-25 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK43_RS05435 eedd0534a82634f437edab63c12e8f45 74 Pfam PF00550 Phosphopantetheine attachment site 3 70 6.4E-19 T 22-04-2016 IPR009081 Phosphopantetheine binding ACP domain AMK43_RS00180 0c032ed500a9275882a9214849763137 214 SUPERFAMILY SSF63862 152 210 4.97E-5 T 22-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 AMK43_RS00180 0c032ed500a9275882a9214849763137 214 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 5 210 3.4E-44 T 22-04-2016 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 AMK43_RS00180 0c032ed500a9275882a9214849763137 214 PANTHER PTHR41299:SF1 4 210 7.6E-21 T 22-04-2016 AMK43_RS00180 0c032ed500a9275882a9214849763137 214 PANTHER PTHR41299 4 210 7.6E-21 T 22-04-2016 AMK43_RS00180 0c032ed500a9275882a9214849763137 214 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 149 205 3.6E-8 T 22-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 AMK43_RS00180 0c032ed500a9275882a9214849763137 214 SUPERFAMILY SSF63999 3 128 5.89E-33 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 AMK43_RS00180 0c032ed500a9275882a9214849763137 214 Gene3D G3DSA:2.60.120.320 126 208 5.5E-4 T 22-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 AMK43_RS00180 0c032ed500a9275882a9214849763137 214 SMART SM00983 154 208 0.0013 T 22-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 AMK43_RS00180 0c032ed500a9275882a9214849763137 214 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 20 124 3.2E-26 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 AMK43_RS00180 0c032ed500a9275882a9214849763137 214 Gene3D G3DSA:3.40.50.10240 1 125 8.0E-34 T 22-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 AMK43_RS04485 e829b635b792599059260bc5ea5e7fc0 271 Gene3D G3DSA:2.60.200.20 169 268 2.9E-12 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMK43_RS04485 e829b635b792599059260bc5ea5e7fc0 271 SUPERFAMILY SSF49879 176 269 3.44E-11 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 AMK43_RS04485 e829b635b792599059260bc5ea5e7fc0 271 Pfam PF00498 FHA domain 177 263 1.0E-7 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 ProSitePatterns PS01244 Aconitase family signature 2. 348 361 - T 22-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 PANTHER PTHR11670 1 635 1.8E-224 T 22-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 Pfam PF00694 Aconitase C-terminal domain 512 575 5.1E-24 T 22-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 PRINTS PR00415 Aconitase family signature 110 123 2.8E-23 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 PRINTS PR00415 Aconitase family signature 186 199 2.8E-23 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 PRINTS PR00415 Aconitase family signature 90 98 2.8E-23 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 PRINTS PR00415 Aconitase family signature 124 139 2.8E-23 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 PRINTS PR00415 Aconitase family signature 348 361 2.8E-23 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 PRINTS PR00415 Aconitase family signature 200 213 2.8E-23 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 TIGRFAM TIGR01342 acon_putative: putative aconitate hydratase 5 638 1.9E-256 T 22-04-2016 IPR006250 Aconitase, putative AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 PANTHER PTHR11670:SF30 1 635 1.8E-224 T 22-04-2016 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 SUPERFAMILY SSF52016 442 639 1.22E-50 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 Gene3D G3DSA:3.30.499.10 270 461 2.1E-54 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 SUPERFAMILY SSF53732 1 440 6.41E-140 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 Gene3D G3DSA:3.40.1060.10 158 262 1.2E-34 T 22-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 Pfam PF00330 Aconitase family (aconitate hydratase) 9 406 1.3E-103 T 22-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 Gene3D G3DSA:3.30.499.10 2 156 8.6E-42 T 22-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 AMK43_RS07720 ad048a20929ba392eae7a182ca87f467 643 Gene3D G3DSA:3.20.19.10 462 638 1.3E-42 T 22-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel AMK43_RS04005 cb4048fc7573e6764b11a494b819fe3b 195 PIRSF PIRSF027391 27 195 7.1E-32 T 22-04-2016 IPR014535 Predicted heptaprenyl diphosphate synthase, component I AMK43_RS04005 cb4048fc7573e6764b11a494b819fe3b 195 PANTHER PTHR41780 23 191 9.9E-19 T 22-04-2016 AMK43_RS04005 cb4048fc7573e6764b11a494b819fe3b 195 Pfam PF07456 Heptaprenyl diphosphate synthase component I 42 185 3.2E-34 T 22-04-2016 IPR010898 Heptaprenyl diphosphate synthase component I AMK43_RS04005 cb4048fc7573e6764b11a494b819fe3b 195 PANTHER PTHR41780:SF1 23 191 9.9E-19 T 22-04-2016 AMK43_RS09015 0111c8988607ec62c51540517d75c148 382 Gene3D G3DSA:2.30.40.10 334 367 7.7E-6 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS09015 0111c8988607ec62c51540517d75c148 382 PANTHER PTHR11113 1 378 4.1E-131 T 22-04-2016 AMK43_RS09015 0111c8988607ec62c51540517d75c148 382 Gene3D G3DSA:2.30.40.10 2 58 1.9E-12 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS09015 0111c8988607ec62c51540517d75c148 382 PIRSF PIRSF038994 1 381 1.1E-115 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AMK43_RS09015 0111c8988607ec62c51540517d75c148 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 2 378 3.2E-120 T 22-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 AMK43_RS09015 0111c8988607ec62c51540517d75c148 382 Gene3D G3DSA:3.20.20.140 59 333 3.6E-87 T 22-04-2016 AMK43_RS09015 0111c8988607ec62c51540517d75c148 382 PANTHER PTHR11113:SF7 1 378 4.1E-131 T 22-04-2016 AMK43_RS09015 0111c8988607ec62c51540517d75c148 382 SUPERFAMILY SSF51556 57 351 1.75E-85 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK43_RS09015 0111c8988607ec62c51540517d75c148 382 SUPERFAMILY SSF51338 1 56 3.36E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS09015 0111c8988607ec62c51540517d75c148 382 SUPERFAMILY SSF51338 351 379 3.36E-13 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS09015 0111c8988607ec62c51540517d75c148 382 Pfam PF01979 Amidohydrolase family 53 378 5.6E-29 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK43_RS10460 07fca3f01fadf8d16c680b0683d491c2 400 PANTHER PTHR30505:SF11 82 124 4.5E-96 T 22-04-2016 AMK43_RS10460 07fca3f01fadf8d16c680b0683d491c2 400 PANTHER PTHR30505:SF11 15 66 4.5E-96 T 22-04-2016 AMK43_RS10460 07fca3f01fadf8d16c680b0683d491c2 400 PANTHER PTHR30505 82 124 4.5E-96 T 22-04-2016 AMK43_RS10460 07fca3f01fadf8d16c680b0683d491c2 400 PANTHER PTHR30505 15 66 4.5E-96 T 22-04-2016 AMK43_RS10460 07fca3f01fadf8d16c680b0683d491c2 400 PANTHER PTHR30505:SF11 140 390 4.5E-96 T 22-04-2016 AMK43_RS10460 07fca3f01fadf8d16c680b0683d491c2 400 Pfam PF02378 Phosphotransferase system, EIIC 28 271 4.2E-13 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMK43_RS10460 07fca3f01fadf8d16c680b0683d491c2 400 PANTHER PTHR30505 140 390 4.5E-96 T 22-04-2016 AMK43_RS11260 d2a74aecc0ca8ca0179a264aba59ef0e 582 Pfam PF00664 ABC transporter transmembrane region 26 296 5.4E-44 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS11260 d2a74aecc0ca8ca0179a264aba59ef0e 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS11260 d2a74aecc0ca8ca0179a264aba59ef0e 582 PANTHER PTHR24221 11 578 4.0E-229 T 22-04-2016 AMK43_RS11260 d2a74aecc0ca8ca0179a264aba59ef0e 582 SUPERFAMILY SSF90123 13 329 4.05E-71 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS11260 d2a74aecc0ca8ca0179a264aba59ef0e 582 SUPERFAMILY SSF52540 333 578 7.38E-95 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11260 d2a74aecc0ca8ca0179a264aba59ef0e 582 Gene3D G3DSA:1.20.1560.10 13 325 8.4E-70 T 22-04-2016 AMK43_RS11260 d2a74aecc0ca8ca0179a264aba59ef0e 582 Pfam PF00005 ABC transporter 360 509 3.8E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS11260 d2a74aecc0ca8ca0179a264aba59ef0e 582 SMART SM00382 369 555 1.4E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS11260 d2a74aecc0ca8ca0179a264aba59ef0e 582 Gene3D G3DSA:3.40.50.300 343 573 3.7E-83 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 Pfam PF08275 DNA primase catalytic core, N-terminal domain 125 244 1.1E-39 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 Pfam PF13155 Toprim-like 256 342 4.0E-21 T 22-04-2016 AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 PANTHER PTHR30313 1 600 4.6E-113 T 22-04-2016 AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 Pfam PF01807 CHC2 zinc finger 4 96 1.7E-27 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 SUPERFAMILY SSF57783 1 95 1.07E-28 T 22-04-2016 AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 SUPERFAMILY SSF56731 111 416 6.93E-92 T 22-04-2016 AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 PIRSF PIRSF002811 1 592 4.6E-144 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 Gene3D G3DSA:3.40.1360.10 235 357 1.4E-37 T 22-04-2016 AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 Gene3D G3DSA:3.90.580.10 1 95 5.8E-32 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 SMART SM00493 253 324 7.9E-13 T 22-04-2016 IPR006171 Toprim domain AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 Gene3D G3DSA:1.20.50.20 361 416 2.0E-4 T 22-04-2016 AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 Hamap MF_00974 DNA primase [dnaG]. 1 544 24.676 T 22-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 Gene3D G3DSA:3.90.980.10 110 234 2.2E-40 T 22-04-2016 IPR013264 DNA primase, catalytic core, N-terminal AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 TIGRFAM TIGR01391 dnaG: DNA primase 1 409 3.8E-124 T 22-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 Pfam PF10410 DnaB-helicase binding domain of primase 361 416 2.6E-8 T 22-04-2016 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 AMK43_RS03275 22e0637df16513114f7ab1daa5ae89fb 600 SMART SM00400 33 87 2.0E-15 T 22-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 SUPERFAMILY SSF54211 7 170 4.93E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 415 508 9.6E-33 T 22-04-2016 IPR025158 Mg chelatase-related protein, C-terminal domain AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 SMART SM00382 224 404 2.9E-5 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 PANTHER PTHR32039 1 184 5.1E-215 T 22-04-2016 AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 PANTHER PTHR32039 204 508 5.1E-215 T 22-04-2016 AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 5 508 5.9E-169 T 22-04-2016 IPR004482 Mg chelatase-related protein AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 SUPERFAMILY SSF52540 203 508 9.43E-41 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 330 343 8.6E-9 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 223 238 8.6E-9 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 354 366 8.6E-9 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 PRINTS PR01657 Mini-chromosome maintenance (MCM) protein family signature 302 316 8.6E-9 T 22-04-2016 IPR001208 MCM domain GO:0003677|GO:0005524|GO:0006260 AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 Gene3D G3DSA:3.40.50.300 202 400 4.7E-42 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 Pfam PF13541 Subunit ChlI of Mg-chelatase 20 143 1.1E-38 T 22-04-2016 AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 PANTHER PTHR32039:SF7 1 184 5.1E-215 T 22-04-2016 IPR004482 Mg chelatase-related protein AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 PANTHER PTHR32039:SF7 204 508 5.1E-215 T 22-04-2016 IPR004482 Mg chelatase-related protein AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 Pfam PF01078 Magnesium chelatase, subunit ChlI 204 407 5.1E-77 T 22-04-2016 IPR000523 Magnesium chelatase ChlI domain AMK43_RS09090 844e0575dac3e69647db10bebeea412e 511 Gene3D G3DSA:3.30.230.10 5 169 7.2E-34 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS02885 5c7e37e968beb767be2ac77b70e26985 161 Gene3D G3DSA:3.40.140.10 9 157 2.7E-46 T 22-04-2016 AMK43_RS02885 5c7e37e968beb767be2ac77b70e26985 161 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 121 5.6E-28 T 22-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 AMK43_RS02885 5c7e37e968beb767be2ac77b70e26985 161 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 78 110 - T 22-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 AMK43_RS02885 5c7e37e968beb767be2ac77b70e26985 161 PIRSF PIRSF006019 1 160 1.2E-49 T 22-04-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210 AMK43_RS02885 5c7e37e968beb767be2ac77b70e26985 161 PANTHER PTHR11086 3 159 3.5E-84 T 22-04-2016 IPR015517 Deoxycytidylate deaminase-related AMK43_RS02885 5c7e37e968beb767be2ac77b70e26985 161 SUPERFAMILY SSF53927 11 149 7.08E-37 T 22-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 AMK43_RS01920 2c280b8e9a0a6e98689cba05009dc02a 321 PIRSF PIRSF015950 1 318 3.7E-91 T 22-04-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 AMK43_RS01920 2c280b8e9a0a6e98689cba05009dc02a 321 SUPERFAMILY SSF55060 174 306 5.68E-41 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain AMK43_RS01920 2c280b8e9a0a6e98689cba05009dc02a 321 SUPERFAMILY SSF54211 4 179 1.21E-33 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS01920 2c280b8e9a0a6e98689cba05009dc02a 321 TIGRFAM TIGR01240 mevDPdecarb: diphosphomevalonate decarboxylase 5 306 4.5E-113 T 22-04-2016 IPR029765 Diphosphomevalonate decarboxylase GO:0004163|GO:0005829|GO:0019287 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 AMK43_RS01920 2c280b8e9a0a6e98689cba05009dc02a 321 PANTHER PTHR10977:SF3 1 303 8.4E-72 T 22-04-2016 AMK43_RS01920 2c280b8e9a0a6e98689cba05009dc02a 321 Gene3D G3DSA:3.30.70.890 174 307 3.7E-50 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain AMK43_RS01920 2c280b8e9a0a6e98689cba05009dc02a 321 Gene3D G3DSA:3.30.230.10 3 173 1.8E-55 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS01920 2c280b8e9a0a6e98689cba05009dc02a 321 PANTHER PTHR10977 1 303 8.4E-72 T 22-04-2016 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922 AMK43_RS01920 2c280b8e9a0a6e98689cba05009dc02a 321 Pfam PF00288 GHMP kinases N terminal domain 97 141 2.0E-7 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMK43_RS00915 c5605ad81c048a862947d7205f61279d 157 SUPERFAMILY SSF55729 25 153 1.57E-14 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS00915 c5605ad81c048a862947d7205f61279d 157 Pfam PF13673 Acetyltransferase (GNAT) domain 29 133 8.2E-8 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS00915 c5605ad81c048a862947d7205f61279d 157 Gene3D G3DSA:3.40.630.30 25 152 5.5E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS04195 e833cef69029f582ca3ecbe249f92208 679 SUPERFAMILY SSF55486 38 679 2.93E-188 T 22-04-2016 AMK43_RS04195 e833cef69029f582ca3ecbe249f92208 679 Pfam PF01431 Peptidase family M13 473 676 7.8E-69 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMK43_RS04195 e833cef69029f582ca3ecbe249f92208 679 PANTHER PTHR11733 33 679 1.5E-174 T 22-04-2016 IPR000718 Peptidase M13 GO:0004222|GO:0006508 AMK43_RS04195 e833cef69029f582ca3ecbe249f92208 679 Pfam PF05649 Peptidase family M13 45 420 1.8E-90 T 22-04-2016 IPR008753 Peptidase M13, N-terminal domain GO:0006508 AMK43_RS04195 e833cef69029f582ca3ecbe249f92208 679 Gene3D G3DSA:3.40.390.10 302 423 8.8E-105 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMK43_RS04195 e833cef69029f582ca3ecbe249f92208 679 Gene3D G3DSA:3.40.390.10 464 679 8.8E-105 T 22-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 AMK43_RS04195 e833cef69029f582ca3ecbe249f92208 679 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 575 586 9.3E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMK43_RS04195 e833cef69029f582ca3ecbe249f92208 679 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 465 477 9.3E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMK43_RS04195 e833cef69029f582ca3ecbe249f92208 679 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 504 520 9.3E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMK43_RS04195 e833cef69029f582ca3ecbe249f92208 679 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 483 495 9.3E-22 T 22-04-2016 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 AMK43_RS01065 b033bdc1944f82cb402360f97a0d0289 164 Gene3D G3DSA:3.40.930.10 2 160 2.6E-44 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS01065 b033bdc1944f82cb402360f97a0d0289 164 SUPERFAMILY SSF55804 2 157 6.41E-34 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 AMK43_RS01065 b033bdc1944f82cb402360f97a0d0289 164 PANTHER PTHR30505 1 164 5.4E-30 T 22-04-2016 AMK43_RS01065 b033bdc1944f82cb402360f97a0d0289 164 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 156 1.4E-33 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS01065 b033bdc1944f82cb402360f97a0d0289 164 PANTHER PTHR30505:SF5 1 164 5.4E-30 T 22-04-2016 AMK43_RS01065 b033bdc1944f82cb402360f97a0d0289 164 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 141 8.5E-31 T 22-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS10430 62c3c1300825d2ceef1841f1e6b64610 392 SUPERFAMILY SSF56601 11 271 1.11E-51 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS10430 62c3c1300825d2ceef1841f1e6b64610 392 Gene3D G3DSA:3.40.710.10 11 262 2.1E-64 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS10430 62c3c1300825d2ceef1841f1e6b64610 392 PANTHER PTHR21581:SF3 34 276 5.4E-44 T 22-04-2016 AMK43_RS10430 62c3c1300825d2ceef1841f1e6b64610 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 110 127 7.3E-16 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK43_RS10430 62c3c1300825d2ceef1841f1e6b64610 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 138 151 7.3E-16 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK43_RS10430 62c3c1300825d2ceef1841f1e6b64610 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 58 69 7.3E-16 T 22-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 AMK43_RS10430 62c3c1300825d2ceef1841f1e6b64610 392 PANTHER PTHR21581 34 276 5.4E-44 T 22-04-2016 AMK43_RS10430 62c3c1300825d2ceef1841f1e6b64610 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 257 9.5E-48 T 22-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 AMK43_RS10885 193f59e4676ddf223fdf337d7ded27d1 245 Pfam PF03749 Sugar fermentation stimulation protein 22 229 5.6E-58 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein AMK43_RS10885 193f59e4676ddf223fdf337d7ded27d1 245 PANTHER PTHR30545:SF2 3 237 2.7E-42 T 22-04-2016 AMK43_RS10885 193f59e4676ddf223fdf337d7ded27d1 245 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 9 239 38.941 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein AMK43_RS10885 193f59e4676ddf223fdf337d7ded27d1 245 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 20 233 1.1E-55 T 22-04-2016 IPR005224 Sugar fermentation stimulation protein AMK43_RS10885 193f59e4676ddf223fdf337d7ded27d1 245 PANTHER PTHR30545 3 237 2.7E-42 T 22-04-2016 AMK43_RS07920 383fbea08902fc72c4ab39a317f0bf26 324 SUPERFAMILY SSF82866 112 294 1.96E-39 T 22-04-2016 AMK43_RS07920 383fbea08902fc72c4ab39a317f0bf26 324 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 32 283 1.8E-72 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMK43_RS07920 383fbea08902fc72c4ab39a317f0bf26 324 PRINTS PR01755 Bacterial translocase SecF protein signature 31 46 6.1E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK43_RS07920 383fbea08902fc72c4ab39a317f0bf26 324 PRINTS PR01755 Bacterial translocase SecF protein signature 194 212 6.1E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK43_RS07920 383fbea08902fc72c4ab39a317f0bf26 324 PRINTS PR01755 Bacterial translocase SecF protein signature 231 246 6.1E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK43_RS07920 383fbea08902fc72c4ab39a317f0bf26 324 PRINTS PR01755 Bacterial translocase SecF protein signature 146 160 6.1E-26 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK43_RS07920 383fbea08902fc72c4ab39a317f0bf26 324 Pfam PF07549 SecD/SecF GG Motif 26 53 5.7E-7 T 22-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site AMK43_RS07920 383fbea08902fc72c4ab39a317f0bf26 324 PANTHER PTHR30081 4 319 5.2E-77 T 22-04-2016 AMK43_RS07920 383fbea08902fc72c4ab39a317f0bf26 324 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 4 294 26.708 T 22-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 AMK43_RS07920 383fbea08902fc72c4ab39a317f0bf26 324 Pfam PF02355 Protein export membrane protein 105 292 3.5E-62 T 22-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial AMK43_RS07920 383fbea08902fc72c4ab39a317f0bf26 324 Gene3D G3DSA:1.20.1640.10 100 302 2.7E-34 T 22-04-2016 AMK43_RS07920 383fbea08902fc72c4ab39a317f0bf26 324 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 90 280 1.9E-53 T 22-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial AMK43_RS06390 3a75f899a6098161fdec0f9b749ba31f 312 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 9 19 - T 22-04-2016 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 AMK43_RS06390 3a75f899a6098161fdec0f9b749ba31f 312 Gene3D G3DSA:3.90.245.10 2 310 1.5E-99 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK43_RS06390 3a75f899a6098161fdec0f9b749ba31f 312 PANTHER PTHR12304 1 309 1.4E-89 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase AMK43_RS06390 3a75f899a6098161fdec0f9b749ba31f 312 SUPERFAMILY SSF53590 4 310 2.09E-91 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK43_RS06390 3a75f899a6098161fdec0f9b749ba31f 312 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 5 303 1.1E-72 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK43_RS01550 4f9cffdd2cbd8a58014671124d464d10 267 SUPERFAMILY SSF56784 1 266 5.04E-63 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS01550 4f9cffdd2cbd8a58014671124d464d10 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 233 2.9E-30 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 AMK43_RS01550 4f9cffdd2cbd8a58014671124d464d10 267 ProSitePatterns PS01229 Hypothetical cof family signature 2. 214 236 - T 22-04-2016 AMK43_RS01550 4f9cffdd2cbd8a58014671124d464d10 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 2.6E-58 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS01550 4f9cffdd2cbd8a58014671124d464d10 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 260 3.7E-52 T 22-04-2016 IPR000150 Cof protein GO:0016787 AMK43_RS01550 4f9cffdd2cbd8a58014671124d464d10 267 Gene3D G3DSA:3.30.1240.10 102 178 1.0E-11 T 22-04-2016 AMK43_RS01550 4f9cffdd2cbd8a58014671124d464d10 267 PANTHER PTHR10000 1 267 7.4E-65 T 22-04-2016 AMK43_RS01550 4f9cffdd2cbd8a58014671124d464d10 267 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 AMK43_RS01550 4f9cffdd2cbd8a58014671124d464d10 267 PANTHER PTHR10000:SF20 1 267 7.4E-65 T 22-04-2016 AMK43_RS01550 4f9cffdd2cbd8a58014671124d464d10 267 Gene3D G3DSA:3.40.50.1000 1 72 9.9E-49 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS01550 4f9cffdd2cbd8a58014671124d464d10 267 Gene3D G3DSA:3.40.50.1000 179 267 9.9E-49 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS08335 617a5d6231ad3e8666897fba58282433 425 PANTHER PTHR37825 4 408 1.1E-73 T 22-04-2016 AMK43_RS08335 617a5d6231ad3e8666897fba58282433 425 PANTHER PTHR37825:SF1 4 408 1.1E-73 T 22-04-2016 AMK43_RS08335 617a5d6231ad3e8666897fba58282433 425 Hamap MF_01539 UPF0348 protein . 2 397 30.263 T 22-04-2016 IPR008513 Uncharacterised protein family UPF0348 AMK43_RS08335 617a5d6231ad3e8666897fba58282433 425 Pfam PF05636 HIGH Nucleotidyl Transferase 4 377 8.9E-106 T 22-04-2016 IPR008513 Uncharacterised protein family UPF0348 AMK43_RS08335 617a5d6231ad3e8666897fba58282433 425 SUPERFAMILY SSF52374 10 107 5.04E-17 T 22-04-2016 AMK43_RS08335 617a5d6231ad3e8666897fba58282433 425 SUPERFAMILY SSF52374 180 237 5.04E-17 T 22-04-2016 AMK43_RS08335 617a5d6231ad3e8666897fba58282433 425 Gene3D G3DSA:3.40.50.620 4 234 1.0E-67 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS00005 a29af53afea01357007ce48b1e4e36ba 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 2 45 1.8E-20 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00005 a29af53afea01357007ce48b1e4e36ba 45 Pfam PF00468 Ribosomal protein L34 2 45 1.2E-22 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00005 a29af53afea01357007ce48b1e4e36ba 45 PANTHER PTHR14503 1 45 1.9E-17 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00005 a29af53afea01357007ce48b1e4e36ba 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 22-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00005 a29af53afea01357007ce48b1e4e36ba 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 16.07 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00005 a29af53afea01357007ce48b1e4e36ba 45 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 4 40 1.0E-9 T 22-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00020 aecfc58a0a646890b828fe9d20540326 232 Pfam PF02096 60Kd inner membrane protein 31 220 1.1E-59 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK43_RS00020 aecfc58a0a646890b828fe9d20540326 232 PANTHER PTHR12428:SF14 31 218 3.2E-60 T 22-04-2016 AMK43_RS00020 aecfc58a0a646890b828fe9d20540326 232 PANTHER PTHR12428 31 218 3.2E-60 T 22-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 AMK43_RS00020 aecfc58a0a646890b828fe9d20540326 232 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 31 220 4.5E-62 T 22-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 SUPERFAMILY SSF52096 210 272 2.11E-12 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 SUPERFAMILY SSF52096 37 174 2.11E-12 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 Gene3D G3DSA:3.90.226.10 211 286 1.3E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 Gene3D G3DSA:3.90.226.10 454 540 1.6E-49 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 Gene3D G3DSA:3.90.226.10 30 166 1.3E-34 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 Gene3D G3DSA:3.90.226.10 305 416 1.6E-49 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 SUPERFAMILY SSF52096 453 514 3.42E-35 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 SUPERFAMILY SSF52096 309 424 3.42E-35 T 22-04-2016 IPR029045 ClpP/crotonase-like domain AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 PANTHER PTHR33209:SF1 85 567 6.1E-116 T 22-04-2016 AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 PANTHER PTHR33209 85 567 6.1E-116 T 22-04-2016 AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 312 524 2.0E-53 T 22-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 Pfam PF01343 Peptidase family S49 377 527 4.2E-43 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 Pfam PF01343 Peptidase family S49 130 281 5.9E-23 T 22-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 PIRSF PIRSF001217 7 595 4.9E-145 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AMK43_RS01565 d25b0b14dd0a7b9e8fdb117f48bc5eb8 597 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 20 570 2.2E-98 T 22-04-2016 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 TIGRFAM TIGR00571 dam: DNA adenine methylase 421 714 3.0E-37 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 PANTHER PTHR30481:SF3 517 716 5.3E-81 T 22-04-2016 AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 PANTHER PTHR30481:SF3 395 499 5.3E-81 T 22-04-2016 AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 83 352 2.5E-33 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 423 702 4.0E-30 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 463 476 1.1E-12 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 423 439 1.1E-12 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 615 627 1.1E-12 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 444 458 1.1E-12 T 22-04-2016 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 618 624 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 278 284 - T 22-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 SUPERFAMILY SSF53335 420 714 2.82E-49 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 Gene3D G3DSA:3.40.50.150 419 470 1.1E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 Gene3D G3DSA:3.40.50.150 599 714 1.1E-46 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 Gene3D G3DSA:3.40.50.150 82 136 1.4E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 Gene3D G3DSA:3.40.50.150 261 362 1.4E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 SUPERFAMILY SSF53335 82 359 5.98E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 Gene3D G3DSA:1.10.1020.10 471 590 5.6E-20 T 22-04-2016 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 PANTHER PTHR30481 517 716 5.3E-81 T 22-04-2016 AMK43_RS11035 ee58f95ee8474415a8f1f054c1543b61 722 PANTHER PTHR30481 395 499 5.3E-81 T 22-04-2016 AMK43_RS01245 fc0b4ca1e100f87fe00a7316e6921aef 340 Gene3D G3DSA:3.90.25.10 266 340 1.6E-53 T 22-04-2016 AMK43_RS01245 fc0b4ca1e100f87fe00a7316e6921aef 340 Gene3D G3DSA:3.90.25.10 180 232 1.6E-53 T 22-04-2016 AMK43_RS01245 fc0b4ca1e100f87fe00a7316e6921aef 340 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 325 4.4E-55 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS01245 fc0b4ca1e100f87fe00a7316e6921aef 340 PANTHER PTHR10366 3 340 7.5E-147 T 22-04-2016 AMK43_RS01245 fc0b4ca1e100f87fe00a7316e6921aef 340 PANTHER PTHR10366:SF308 3 340 7.5E-147 T 22-04-2016 AMK43_RS01245 fc0b4ca1e100f87fe00a7316e6921aef 340 Gene3D G3DSA:3.40.50.720 1 179 3.0E-51 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS01245 fc0b4ca1e100f87fe00a7316e6921aef 340 SUPERFAMILY SSF51735 1 339 1.85E-94 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS01245 fc0b4ca1e100f87fe00a7316e6921aef 340 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 337 1.7E-131 T 22-04-2016 IPR005886 UDP-glucose 4-epimerase GalE GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|UniPathway: UPA00214 AMK43_RS00845 4528ad8e56c16b4140d9749eb26a7207 215 Gene3D G3DSA:3.30.950.10 107 208 2.7E-16 T 22-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 AMK43_RS00845 4528ad8e56c16b4140d9749eb26a7207 215 Gene3D G3DSA:3.40.1010.10 2 106 4.8E-17 T 22-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 AMK43_RS00845 4528ad8e56c16b4140d9749eb26a7207 215 SUPERFAMILY SSF53790 2 205 5.38E-33 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK43_RS00845 4528ad8e56c16b4140d9749eb26a7207 215 PANTHER PTHR10882:SF3 2 193 1.8E-66 T 22-04-2016 AMK43_RS00845 4528ad8e56c16b4140d9749eb26a7207 215 PANTHER PTHR10882 2 193 1.8E-66 T 22-04-2016 AMK43_RS00845 4528ad8e56c16b4140d9749eb26a7207 215 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 5 205 2.2E-63 T 22-04-2016 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 AMK43_RS00845 4528ad8e56c16b4140d9749eb26a7207 215 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 190 2.6E-18 T 22-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 AMK43_RS05575 3e9ddef8335479fcdf0f1266e9213dac 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 55 77 - T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMK43_RS05575 3e9ddef8335479fcdf0f1266e9213dac 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 77 9.4E-15 T 22-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 AMK43_RS05575 3e9ddef8335479fcdf0f1266e9213dac 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 180 1.1E-46 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 AMK43_RS05575 3e9ddef8335479fcdf0f1266e9213dac 182 PANTHER PTHR14269 1 180 4.3E-40 T 22-04-2016 AMK43_RS05575 3e9ddef8335479fcdf0f1266e9213dac 182 PIRSF PIRSF000847 1 182 4.0E-48 T 22-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 AMK43_RS00840 18bfe7bb4aadb9abdcb478374fffb732 374 SUPERFAMILY SSF111342 3 289 4.84E-81 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 AMK43_RS00840 18bfe7bb4aadb9abdcb478374fffb732 374 PIRSF PIRSF026782 8 368 9.9E-114 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 AMK43_RS00840 18bfe7bb4aadb9abdcb478374fffb732 374 PANTHER PTHR35863 1 374 2.3E-109 T 22-04-2016 AMK43_RS00840 18bfe7bb4aadb9abdcb478374fffb732 374 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 12 362 28.764 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 AMK43_RS00840 18bfe7bb4aadb9abdcb478374fffb732 374 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 20 361 9.6E-89 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 AMK43_RS00840 18bfe7bb4aadb9abdcb478374fffb732 374 PANTHER PTHR35863:SF1 1 374 2.3E-109 T 22-04-2016 AMK43_RS00840 18bfe7bb4aadb9abdcb478374fffb732 374 Gene3D G3DSA:3.30.2110.10 15 185 1.0E-58 T 22-04-2016 AMK43_RS00840 18bfe7bb4aadb9abdcb478374fffb732 374 Pfam PF01888 CbiD 12 271 5.2E-90 T 22-04-2016 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 AMK43_RS04610 6c264891565ae05a0b394ef37b7dc85a 1346 SUPERFAMILY SSF53955 27 224 3.66E-14 T 22-04-2016 IPR023346 Lysozyme-like domain AMK43_RS04610 6c264891565ae05a0b394ef37b7dc85a 1346 Gene3D G3DSA:3.30.20.10 114 158 1.0E-5 T 22-04-2016 AMK43_RS04610 6c264891565ae05a0b394ef37b7dc85a 1346 Pfam PF14107 Domain of unknown function (DUF4280) 712 804 9.1E-14 T 22-04-2016 IPR025460 Protein of unknown function DUF4280 AMK43_RS10770 ec725cd19bb15d531f36a2db966b8ef1 220 SMART SM00934 5 210 3.1E-27 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS10770 ec725cd19bb15d531f36a2db966b8ef1 220 Gene3D G3DSA:3.20.20.70 1 218 1.6E-75 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS10770 ec725cd19bb15d531f36a2db966b8ef1 220 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 209 1.6E-29 T 22-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 AMK43_RS10770 ec725cd19bb15d531f36a2db966b8ef1 220 SUPERFAMILY SSF51366 1 215 2.74E-37 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK43_RS10770 ec725cd19bb15d531f36a2db966b8ef1 220 PANTHER PTHR35039 1 220 7.3E-104 T 22-04-2016 AMK43_RS10770 ec725cd19bb15d531f36a2db966b8ef1 220 PANTHER PTHR35039:SF2 1 220 7.3E-104 T 22-04-2016 AMK43_RS10595 9642b492d7a96ac1081de769ae18e6f1 322 PANTHER PTHR30465:SF75 34 322 8.4E-113 T 22-04-2016 AMK43_RS10595 9642b492d7a96ac1081de769ae18e6f1 322 SUPERFAMILY SSF161098 116 302 1.57E-22 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS10595 9642b492d7a96ac1081de769ae18e6f1 322 PANTHER PTHR30465 34 322 8.4E-113 T 22-04-2016 AMK43_RS10595 9642b492d7a96ac1081de769ae18e6f1 322 Gene3D G3DSA:1.10.3720.10 114 318 8.4E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS10595 9642b492d7a96ac1081de769ae18e6f1 322 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 41 87 3.2E-12 T 22-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain AMK43_RS10595 9642b492d7a96ac1081de769ae18e6f1 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 138 321 2.0E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00120 449aa977de466eec26565c5ee00ea659 124 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 80 97 - T 22-04-2016 IPR001882 Biotin-binding site AMK43_RS00120 449aa977de466eec26565c5ee00ea659 124 Gene3D G3DSA:2.40.50.100 51 123 4.9E-25 T 22-04-2016 AMK43_RS00120 449aa977de466eec26565c5ee00ea659 124 PANTHER PTHR18866:SF103 58 123 3.4E-18 T 22-04-2016 AMK43_RS00120 449aa977de466eec26565c5ee00ea659 124 Pfam PF00364 Biotin-requiring enzyme 57 122 1.5E-18 T 22-04-2016 IPR000089 Biotin/lipoyl attachment AMK43_RS00120 449aa977de466eec26565c5ee00ea659 124 PANTHER PTHR18866 58 123 3.4E-18 T 22-04-2016 AMK43_RS00120 449aa977de466eec26565c5ee00ea659 124 SUPERFAMILY SSF51230 50 123 1.57E-22 T 22-04-2016 IPR011053 Single hybrid motif AMK43_RS08640 b8fd2c4582118f055a45fac9d9b3cb74 329 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 9 124 1.5E-21 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK43_RS08640 b8fd2c4582118f055a45fac9d9b3cb74 329 Gene3D G3DSA:3.30.360.10 149 328 2.4E-40 T 22-04-2016 AMK43_RS08640 b8fd2c4582118f055a45fac9d9b3cb74 329 SUPERFAMILY SSF55347 132 295 1.96E-33 T 22-04-2016 AMK43_RS08640 b8fd2c4582118f055a45fac9d9b3cb74 329 PANTHER PTHR22604 1 328 4.5E-61 T 22-04-2016 AMK43_RS08640 b8fd2c4582118f055a45fac9d9b3cb74 329 SUPERFAMILY SSF51735 7 159 1.47E-42 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS08640 b8fd2c4582118f055a45fac9d9b3cb74 329 PANTHER PTHR22604:SF105 1 328 4.5E-61 T 22-04-2016 AMK43_RS08640 b8fd2c4582118f055a45fac9d9b3cb74 329 Gene3D G3DSA:3.40.50.720 6 148 2.7E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS10185 868c21b00871dc6c4232beeb47e5b536 242 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 37 236 6.6E-41 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK43_RS10185 868c21b00871dc6c4232beeb47e5b536 242 SMART SM00646 117 236 1.8E-18 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK43_RS10185 868c21b00871dc6c4232beeb47e5b536 242 PANTHER PTHR30404 67 242 2.5E-39 T 22-04-2016 AMK43_RS10185 868c21b00871dc6c4232beeb47e5b536 242 PANTHER PTHR30404 6 47 2.5E-39 T 22-04-2016 AMK43_RS10185 868c21b00871dc6c4232beeb47e5b536 242 SUPERFAMILY SSF53187 36 240 5.34E-38 T 22-04-2016 AMK43_RS10185 868c21b00871dc6c4232beeb47e5b536 242 Gene3D G3DSA:3.40.630.40 36 239 1.4E-45 T 22-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 AMK43_RS00200 d6a081e85812994725c79e1cda912da4 905 Pfam PF00391 PEP-utilising enzyme, mobile domain 826 897 6.9E-22 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK43_RS00200 d6a081e85812994725c79e1cda912da4 905 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 21 326 1.5E-65 T 22-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 AMK43_RS00200 d6a081e85812994725c79e1cda912da4 905 PANTHER PTHR22931:SF7 812 899 1.2E-94 T 22-04-2016 AMK43_RS00200 d6a081e85812994725c79e1cda912da4 905 PANTHER PTHR22931:SF7 18 385 1.2E-94 T 22-04-2016 AMK43_RS00200 d6a081e85812994725c79e1cda912da4 905 SUPERFAMILY SSF52009 796 899 1.31E-26 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK43_RS00200 d6a081e85812994725c79e1cda912da4 905 PANTHER PTHR22931 812 899 1.2E-94 T 22-04-2016 AMK43_RS00200 d6a081e85812994725c79e1cda912da4 905 PANTHER PTHR22931 18 385 1.2E-94 T 22-04-2016 AMK43_RS00200 d6a081e85812994725c79e1cda912da4 905 Gene3D G3DSA:3.50.30.10 796 899 3.5E-25 T 22-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 AMK43_RS00200 d6a081e85812994725c79e1cda912da4 905 Gene3D G3DSA:3.30.470.20 189 329 2.1E-39 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK43_RS00200 d6a081e85812994725c79e1cda912da4 905 Gene3D G3DSA:3.30.1490.20 2 188 3.1E-34 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK43_RS00200 d6a081e85812994725c79e1cda912da4 905 SUPERFAMILY SSF56059 19 350 4.36E-60 T 22-04-2016 AMK43_RS07415 ce8f0bef63d7cb626ac402f295858080 401 Gene3D G3DSA:3.40.640.10 50 260 3.0E-53 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS07415 ce8f0bef63d7cb626ac402f295858080 401 Pfam PF00155 Aminotransferase class I and II 58 379 1.1E-35 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK43_RS07415 ce8f0bef63d7cb626ac402f295858080 401 PANTHER PTHR11751 6 388 3.6E-114 T 22-04-2016 AMK43_RS07415 ce8f0bef63d7cb626ac402f295858080 401 PANTHER PTHR11751:SF422 6 388 3.6E-114 T 22-04-2016 AMK43_RS07415 ce8f0bef63d7cb626ac402f295858080 401 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 7 393 1.8E-125 T 22-04-2016 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 AMK43_RS07415 ce8f0bef63d7cb626ac402f295858080 401 Gene3D G3DSA:3.90.1150.10 261 394 1.4E-31 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS07415 ce8f0bef63d7cb626ac402f295858080 401 SUPERFAMILY SSF53383 4 394 9.97E-92 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS00460 e11a99ce227b73032ac2e5fa5eb91a30 184 Gene3D G3DSA:3.30.1440.10 7 183 3.1E-74 T 22-04-2016 IPR022803 Ribosomal protein L5 domain AMK43_RS00460 e11a99ce227b73032ac2e5fa5eb91a30 184 PANTHER PTHR11994 2 183 2.0E-88 T 22-04-2016 AMK43_RS00460 e11a99ce227b73032ac2e5fa5eb91a30 184 SUPERFAMILY SSF55282 8 183 2.12E-73 T 22-04-2016 IPR022803 Ribosomal protein L5 domain AMK43_RS00460 e11a99ce227b73032ac2e5fa5eb91a30 184 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 6 184 41.923 T 22-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00460 e11a99ce227b73032ac2e5fa5eb91a30 184 Pfam PF00281 Ribosomal protein L5 29 85 1.4E-26 T 22-04-2016 IPR031310 Ribosomal protein L5, N-terminal AMK43_RS00460 e11a99ce227b73032ac2e5fa5eb91a30 184 PIRSF PIRSF002161 3 184 2.1E-62 T 22-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00460 e11a99ce227b73032ac2e5fa5eb91a30 184 Pfam PF00673 ribosomal L5P family C-terminus 89 182 1.5E-38 T 22-04-2016 IPR031309 Ribosomal protein L5, C-terminal AMK43_RS07975 6bccd1fda5ef82873535c8adc3e87482 351 PANTHER PTHR12715 1 285 9.7E-30 T 22-04-2016 AMK43_RS07975 6bccd1fda5ef82873535c8adc3e87482 351 SUPERFAMILY SSF103481 194 288 4.97E-11 T 22-04-2016 AMK43_RS07975 6bccd1fda5ef82873535c8adc3e87482 351 SUPERFAMILY SSF103481 71 147 2.09E-9 T 22-04-2016 AMK43_RS07975 6bccd1fda5ef82873535c8adc3e87482 351 Pfam PF00892 EamA-like transporter family 155 286 5.1E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK43_RS07975 6bccd1fda5ef82873535c8adc3e87482 351 Pfam PF00892 EamA-like transporter family 8 144 1.5E-21 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK43_RS11430 4293b0df00827c785b0250f2dc292eaa 363 PANTHER PTHR32182 1 343 4.6E-38 T 22-04-2016 AMK43_RS11430 4293b0df00827c785b0250f2dc292eaa 363 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 363 69.674 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AMK43_RS11430 4293b0df00827c785b0250f2dc292eaa 363 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 348 1.1E-84 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AMK43_RS11430 4293b0df00827c785b0250f2dc292eaa 363 SUPERFAMILY SSF52540 1 213 1.72E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11430 4293b0df00827c785b0250f2dc292eaa 363 SUPERFAMILY SSF52540 240 342 1.72E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11430 4293b0df00827c785b0250f2dc292eaa 363 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 344 7.5E-19 T 22-04-2016 IPR003395 RecF/RecN/SMC, N-terminal AMK43_RS11430 4293b0df00827c785b0250f2dc292eaa 363 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 22-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 AMK43_RS11430 4293b0df00827c785b0250f2dc292eaa 363 PANTHER PTHR32182:SF0 1 343 4.6E-38 T 22-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 AMK43_RS11430 4293b0df00827c785b0250f2dc292eaa 363 Gene3D G3DSA:3.40.50.300 1 166 5.3E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11430 4293b0df00827c785b0250f2dc292eaa 363 Gene3D G3DSA:3.40.50.300 232 343 5.3E-28 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05610 a170bf846a3e1efb97e3939f8223b89f 487 PANTHER PTHR30175 18 462 4.7E-115 T 22-04-2016 AMK43_RS05610 a170bf846a3e1efb97e3939f8223b89f 487 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 31 342 9.1E-101 T 22-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal AMK43_RS05610 a170bf846a3e1efb97e3939f8223b89f 487 SUPERFAMILY SSF75005 22 343 2.83E-104 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AMK43_RS05610 a170bf846a3e1efb97e3939f8223b89f 487 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 383 451 2.6E-16 T 22-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal AMK43_RS05610 a170bf846a3e1efb97e3939f8223b89f 487 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 16 462 3.0E-165 T 22-04-2016 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26|UniPathway: UPA00238 AMK43_RS05610 a170bf846a3e1efb97e3939f8223b89f 487 SUPERFAMILY SSF49899 343 486 4.67E-29 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMK43_RS05610 a170bf846a3e1efb97e3939f8223b89f 487 Gene3D G3DSA:2.60.120.560 325 483 3.9E-37 T 22-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal AMK43_RS05610 a170bf846a3e1efb97e3939f8223b89f 487 PANTHER PTHR30175:SF8 18 462 4.7E-115 T 22-04-2016 AMK43_RS05610 a170bf846a3e1efb97e3939f8223b89f 487 SMART SM00640 31 451 2.7E-130 T 22-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 AMK43_RS05610 a170bf846a3e1efb97e3939f8223b89f 487 Gene3D G3DSA:2.115.10.20 37 324 1.5E-18 T 22-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain AMK43_RS09085 40214c01748ef606684bcb3c98b9851a 291 PANTHER PTHR23024:SF47 33 288 3.4E-38 T 22-04-2016 AMK43_RS09085 40214c01748ef606684bcb3c98b9851a 291 SUPERFAMILY SSF53474 66 287 2.92E-31 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS09085 40214c01748ef606684bcb3c98b9851a 291 Gene3D G3DSA:3.40.50.1820 64 288 3.9E-39 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS09085 40214c01748ef606684bcb3c98b9851a 291 PANTHER PTHR23024 33 288 3.4E-38 T 22-04-2016 AMK43_RS09085 40214c01748ef606684bcb3c98b9851a 291 Pfam PF07859 alpha/beta hydrolase fold 69 271 6.4E-35 T 22-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 AMK43_RS04330 4f1153340b86e02178725dec0377d399 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 219 2.9E-18 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS04330 4f1153340b86e02178725dec0377d399 222 Gene3D G3DSA:1.10.3720.10 11 219 3.9E-35 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS04330 4f1153340b86e02178725dec0377d399 222 PANTHER PTHR30450:SF6 1 221 1.4E-98 T 22-04-2016 AMK43_RS04330 4f1153340b86e02178725dec0377d399 222 SUPERFAMILY SSF161098 11 204 7.98E-41 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS04330 4f1153340b86e02178725dec0377d399 222 PANTHER PTHR30450 1 221 1.4E-98 T 22-04-2016 AMK43_RS10440 9c19478fc89480a087d4deb436f1369d 213 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.1E-16 T 22-04-2016 AMK43_RS10440 9c19478fc89480a087d4deb436f1369d 213 Gene3D G3DSA:1.10.150.20 67 139 6.6E-27 T 22-04-2016 AMK43_RS10440 9c19478fc89480a087d4deb436f1369d 213 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 210 26.71 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AMK43_RS10440 9c19478fc89480a087d4deb436f1369d 213 SUPERFAMILY SSF47781 66 137 1.22E-20 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK43_RS10440 9c19478fc89480a087d4deb436f1369d 213 SUPERFAMILY SSF50249 1 63 1.77E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10440 9c19478fc89480a087d4deb436f1369d 213 Gene3D G3DSA:2.40.50.140 1 66 1.4E-19 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10440 9c19478fc89480a087d4deb436f1369d 213 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 207 8.5E-41 T 22-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 AMK43_RS10440 9c19478fc89480a087d4deb436f1369d 213 PANTHER PTHR33796 2 212 2.9E-54 T 22-04-2016 AMK43_RS10440 9c19478fc89480a087d4deb436f1369d 213 SMART SM00278 73 92 1.1 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK43_RS10440 9c19478fc89480a087d4deb436f1369d 213 SMART SM00278 108 127 0.59 T 22-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 AMK43_RS10440 9c19478fc89480a087d4deb436f1369d 213 Pfam PF01330 RuvA N terminal domain 1 62 1.4E-16 T 22-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 AMK43_RS08065 de85eeaca2add4cb7de2b3d61516eaf3 280 Gene3D G3DSA:3.60.21.10 52 225 9.7E-18 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS08065 de85eeaca2add4cb7de2b3d61516eaf3 280 Pfam PF00149 Calcineurin-like phosphoesterase 52 216 5.1E-10 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK43_RS08065 de85eeaca2add4cb7de2b3d61516eaf3 280 SUPERFAMILY SSF56300 52 277 1.83E-27 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS08065 de85eeaca2add4cb7de2b3d61516eaf3 280 PANTHER PTHR31302:SF6 4 279 4.8E-51 T 22-04-2016 AMK43_RS08065 de85eeaca2add4cb7de2b3d61516eaf3 280 PANTHER PTHR31302 4 279 4.8E-51 T 22-04-2016 AMK43_RS05790 f90143c5f41e9488e848d2747c475ea9 334 Pfam PF06574 FAD synthetase 32 182 1.9E-34 T 22-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AMK43_RS05790 f90143c5f41e9488e848d2747c475ea9 334 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 38 316 5.4E-67 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AMK43_RS05790 f90143c5f41e9488e848d2747c475ea9 334 Gene3D G3DSA:3.40.50.620 29 195 1.9E-43 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS05790 f90143c5f41e9488e848d2747c475ea9 334 PANTHER PTHR22749:SF0 9 325 2.8E-81 T 22-04-2016 AMK43_RS05790 f90143c5f41e9488e848d2747c475ea9 334 Gene3D G3DSA:2.40.30.30 196 331 7.8E-37 T 22-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 AMK43_RS05790 f90143c5f41e9488e848d2747c475ea9 334 SUPERFAMILY SSF82114 191 325 2.03E-40 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AMK43_RS05790 f90143c5f41e9488e848d2747c475ea9 334 PANTHER PTHR22749 9 325 2.8E-81 T 22-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 AMK43_RS05790 f90143c5f41e9488e848d2747c475ea9 334 SUPERFAMILY SSF52374 35 191 7.88E-27 T 22-04-2016 AMK43_RS05790 f90143c5f41e9488e848d2747c475ea9 334 PIRSF PIRSF004491 19 331 8.6E-83 T 22-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 AMK43_RS05790 f90143c5f41e9488e848d2747c475ea9 334 Pfam PF01687 Riboflavin kinase 200 317 5.0E-32 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AMK43_RS05790 f90143c5f41e9488e848d2747c475ea9 334 SMART SM00904 199 324 3.7E-41 T 22-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 AMK43_RS07645 3c4a9e27aa1b3021ae32f4ae252adf00 132 ProSitePatterns PS00360 Ribosomal protein S9 signature. 71 89 - T 22-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 AMK43_RS07645 3c4a9e27aa1b3021ae32f4ae252adf00 132 SUPERFAMILY SSF54211 7 132 3.22E-44 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS07645 3c4a9e27aa1b3021ae32f4ae252adf00 132 Pfam PF00380 Ribosomal protein S9/S16 11 132 1.7E-44 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AMK43_RS07645 3c4a9e27aa1b3021ae32f4ae252adf00 132 Gene3D G3DSA:3.30.230.10 6 132 1.2E-47 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS07645 3c4a9e27aa1b3021ae32f4ae252adf00 132 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 2 132 32.697 T 22-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid AMK43_RS07645 3c4a9e27aa1b3021ae32f4ae252adf00 132 PANTHER PTHR21569 6 132 1.3E-59 T 22-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 AMK43_RS04335 ff25c86f51d62765654120960361e4a4 528 SUPERFAMILY SSF56925 265 443 3.92E-5 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK43_RS04335 ff25c86f51d62765654120960361e4a4 528 Gene3D G3DSA:2.40.160.20 341 443 1.2E-4 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK43_RS04335 ff25c86f51d62765654120960361e4a4 528 Gene3D G3DSA:2.40.160.20 247 293 1.2E-4 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK43_RS09655 3a78f67f20c5d2d972a0fa32ed09c2b3 511 PIRSF PIRSF002741 32 511 7.7E-49 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK43_RS09655 3a78f67f20c5d2d972a0fa32ed09c2b3 511 Gene3D G3DSA:3.10.105.10 297 398 2.3E-10 T 22-04-2016 AMK43_RS09655 3a78f67f20c5d2d972a0fa32ed09c2b3 511 Gene3D G3DSA:3.40.190.10 203 296 2.6E-23 T 22-04-2016 AMK43_RS09655 3a78f67f20c5d2d972a0fa32ed09c2b3 511 PANTHER PTHR30290 3 510 5.8E-51 T 22-04-2016 AMK43_RS09655 3a78f67f20c5d2d972a0fa32ed09c2b3 511 SUPERFAMILY SSF53850 57 509 1.38E-60 T 22-04-2016 AMK43_RS09655 3a78f67f20c5d2d972a0fa32ed09c2b3 511 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 397 1.5E-43 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK43_RS09655 3a78f67f20c5d2d972a0fa32ed09c2b3 511 Gene3D G3DSA:3.90.76.10 58 202 3.6E-22 T 22-04-2016 AMK43_RS06155 a7fbbc225d2ff34d5dad3a6458bfebf6 212 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 90 3.2E-25 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK43_RS06155 a7fbbc225d2ff34d5dad3a6458bfebf6 212 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 174 181 - T 22-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK43_RS06155 a7fbbc225d2ff34d5dad3a6458bfebf6 212 Gene3D G3DSA:1.10.287.990 20 90 6.7E-27 T 22-04-2016 AMK43_RS06155 a7fbbc225d2ff34d5dad3a6458bfebf6 212 PANTHER PTHR11404 1 212 2.3E-100 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK43_RS06155 a7fbbc225d2ff34d5dad3a6458bfebf6 212 SUPERFAMILY SSF54719 93 211 1.7E-46 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK43_RS06155 a7fbbc225d2ff34d5dad3a6458bfebf6 212 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 98 207 3.0E-43 T 22-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK43_RS06155 a7fbbc225d2ff34d5dad3a6458bfebf6 212 PRINTS PR01703 Manganese superoxide dismutase signature 172 184 5.1E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK43_RS06155 a7fbbc225d2ff34d5dad3a6458bfebf6 212 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 5.1E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK43_RS06155 a7fbbc225d2ff34d5dad3a6458bfebf6 212 PRINTS PR01703 Manganese superoxide dismutase signature 127 135 5.1E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK43_RS06155 a7fbbc225d2ff34d5dad3a6458bfebf6 212 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 5.1E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK43_RS06155 a7fbbc225d2ff34d5dad3a6458bfebf6 212 PRINTS PR01703 Manganese superoxide dismutase signature 74 87 5.1E-22 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK43_RS06155 a7fbbc225d2ff34d5dad3a6458bfebf6 212 PIRSF PIRSF000349 1 212 3.2E-79 T 22-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK43_RS06155 a7fbbc225d2ff34d5dad3a6458bfebf6 212 SUPERFAMILY SSF46609 2 90 7.86E-30 T 22-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 AMK43_RS07500 79892773638125cf387c5a21b843c3f2 337 Pfam PF12889 Protein of unknown function (DUF3829) 44 334 6.0E-57 T 22-04-2016 IPR024291 Protein of unknown function DUF3829 AMK43_RS08260 9008961ca27e027b72228a0b1c58e1c8 71 SUPERFAMILY SSF64307 1 71 2.49E-13 T 22-04-2016 IPR001455 TusA-like domain AMK43_RS08260 9008961ca27e027b72228a0b1c58e1c8 71 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 4 28 - T 22-04-2016 IPR001455 TusA-like domain AMK43_RS08260 9008961ca27e027b72228a0b1c58e1c8 71 Gene3D G3DSA:3.30.110.40 2 71 1.7E-13 T 22-04-2016 IPR001455 TusA-like domain AMK43_RS08260 9008961ca27e027b72228a0b1c58e1c8 71 Pfam PF01206 Sulfurtransferase TusA 2 71 1.6E-14 T 22-04-2016 IPR001455 TusA-like domain AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 Pfam PF00288 GHMP kinases N terminal domain 82 140 4.5E-13 T 22-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 PANTHER PTHR20861:SF1 4 300 1.1E-83 T 22-04-2016 AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 Gene3D G3DSA:3.30.70.890 161 292 5.9E-36 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 86 97 - T 22-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 Pfam PF08544 GHMP kinases C terminal 204 260 3.2E-5 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 PRINTS PR00958 Homoserine kinase signature 127 140 3.5E-38 T 22-04-2016 AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 PRINTS PR00958 Homoserine kinase signature 12 27 3.5E-38 T 22-04-2016 AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 PRINTS PR00958 Homoserine kinase signature 93 108 3.5E-38 T 22-04-2016 AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 PRINTS PR00958 Homoserine kinase signature 166 183 3.5E-38 T 22-04-2016 AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 PRINTS PR00958 Homoserine kinase signature 245 260 3.5E-38 T 22-04-2016 AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 SUPERFAMILY SSF54211 4 149 2.88E-28 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 SUPERFAMILY SSF55060 162 281 1.04E-26 T 22-04-2016 IPR013750 GHMP kinase, C-terminal domain AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 PANTHER PTHR20861 4 300 1.1E-83 T 22-04-2016 AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 Hamap MF_00384 Homoserine kinase [thrB]. 5 296 29.467 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 PIRSF PIRSF000676 1 299 1.9E-80 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 Gene3D G3DSA:3.30.230.10 4 153 1.8E-45 T 22-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup AMK43_RS04975 dc3b0064514aab3b1b9130300021c526 302 TIGRFAM TIGR00191 thrB: homoserine kinase 5 297 2.4E-78 T 22-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 AMK43_RS10680 aa09fce837e55ecf5cca379b6a1872fd 457 SUPERFAMILY SSF118215 34 439 1.44E-90 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS10680 aa09fce837e55ecf5cca379b6a1872fd 457 PANTHER PTHR11958 30 454 4.8E-87 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS10680 aa09fce837e55ecf5cca379b6a1872fd 457 PANTHER PTHR11958:SF59 30 454 4.8E-87 T 22-04-2016 AMK43_RS10680 aa09fce837e55ecf5cca379b6a1872fd 457 PRINTS PR00173 Glutamate-aspartate symporter signature 115 140 4.3E-18 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS10680 aa09fce837e55ecf5cca379b6a1872fd 457 PRINTS PR00173 Glutamate-aspartate symporter signature 85 105 4.3E-18 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS10680 aa09fce837e55ecf5cca379b6a1872fd 457 PRINTS PR00173 Glutamate-aspartate symporter signature 36 56 4.3E-18 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS10680 aa09fce837e55ecf5cca379b6a1872fd 457 PRINTS PR00173 Glutamate-aspartate symporter signature 331 357 4.3E-18 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS10680 aa09fce837e55ecf5cca379b6a1872fd 457 PRINTS PR00173 Glutamate-aspartate symporter signature 394 414 4.3E-18 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS10680 aa09fce837e55ecf5cca379b6a1872fd 457 Gene3D G3DSA:1.10.3860.10 28 445 6.8E-93 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS10680 aa09fce837e55ecf5cca379b6a1872fd 457 Pfam PF00375 Sodium:dicarboxylate symporter family 35 439 3.0E-101 T 22-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 AMK43_RS10910 4c51ee854318d07190c5c32e95379d22 425 PANTHER PTHR30575 153 359 7.4E-21 T 22-04-2016 AMK43_RS10910 4c51ee854318d07190c5c32e95379d22 425 PANTHER PTHR30575 8 135 7.4E-21 T 22-04-2016 AMK43_RS10910 4c51ee854318d07190c5c32e95379d22 425 Gene3D G3DSA:3.30.70.360 194 303 3.2E-17 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS10910 4c51ee854318d07190c5c32e95379d22 425 SUPERFAMILY SSF53187 4 209 1.53E-28 T 22-04-2016 AMK43_RS10910 4c51ee854318d07190c5c32e95379d22 425 SUPERFAMILY SSF53187 310 376 1.53E-28 T 22-04-2016 AMK43_RS10910 4c51ee854318d07190c5c32e95379d22 425 SUPERFAMILY SSF55031 194 310 2.99E-16 T 22-04-2016 IPR011650 Peptidase M20, dimerisation domain AMK43_RS10910 4c51ee854318d07190c5c32e95379d22 425 Gene3D G3DSA:3.40.630.10 4 192 7.5E-35 T 22-04-2016 AMK43_RS10910 4c51ee854318d07190c5c32e95379d22 425 Gene3D G3DSA:3.40.630.10 307 375 7.5E-35 T 22-04-2016 AMK43_RS05845 e09abd1aa9f935e89b478b0b296604d0 180 PANTHER PTHR40658 1 180 3.7E-114 T 22-04-2016 AMK43_RS05845 e09abd1aa9f935e89b478b0b296604d0 180 PANTHER PTHR40658:SF1 1 180 3.7E-114 T 22-04-2016 AMK43_RS05845 e09abd1aa9f935e89b478b0b296604d0 180 PIRSF PIRSF031551 1 180 1.3E-66 T 22-04-2016 IPR012550 Protein of unknown function DUF1706 AMK43_RS05845 e09abd1aa9f935e89b478b0b296604d0 180 Gene3D G3DSA:1.20.120.450 4 142 4.9E-7 T 22-04-2016 IPR027369 DinB/YfiT-like putative metal-dependent hydrolase AMK43_RS05845 e09abd1aa9f935e89b478b0b296604d0 180 Pfam PF08020 Protein of unknown function (DUF1706) 1 175 2.3E-58 T 22-04-2016 IPR012550 Protein of unknown function DUF1706 AMK43_RS09505 b5d98c918857be150909645768fb8fcf 382 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 37 379 7.6E-77 T 22-04-2016 IPR010327 FldB/FldC dehydratase alpha/beta subunit AMK43_RS09505 b5d98c918857be150909645768fb8fcf 382 PANTHER PTHR30548:SF6 1 382 6.6E-168 T 22-04-2016 AMK43_RS09505 b5d98c918857be150909645768fb8fcf 382 PANTHER PTHR30548 1 382 6.6E-168 T 22-04-2016 AMK43_RS06785 484788488fa50cbdce07911605fbfe6d 537 TIGRFAM TIGR00337 PyrG: CTP synthase 8 529 5.6E-251 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMK43_RS06785 484788488fa50cbdce07911605fbfe6d 537 Hamap MF_01227 CTP synthase [pyrG]. 8 534 51.409 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMK43_RS06785 484788488fa50cbdce07911605fbfe6d 537 SUPERFAMILY SSF52540 8 277 1.23E-120 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06785 484788488fa50cbdce07911605fbfe6d 537 Pfam PF06418 CTP synthase N-terminus 9 273 4.5E-126 T 22-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMK43_RS06785 484788488fa50cbdce07911605fbfe6d 537 SUPERFAMILY SSF52317 297 531 7.37E-79 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS06785 484788488fa50cbdce07911605fbfe6d 537 Pfam PF00117 Glutamine amidotransferase class-I 308 528 9.6E-59 T 22-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 AMK43_RS06785 484788488fa50cbdce07911605fbfe6d 537 PANTHER PTHR11550 1 531 0.0 T 22-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 AMK43_RS06785 484788488fa50cbdce07911605fbfe6d 537 Gene3D G3DSA:3.40.50.880 296 535 5.1E-98 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS06785 484788488fa50cbdce07911605fbfe6d 537 Gene3D G3DSA:3.40.50.300 7 291 1.5E-135 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06340 d3f244b803a25a25763fff5c3231b3dc 94 SUPERFAMILY SSF54909 3 76 6.7E-15 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel AMK43_RS06340 d3f244b803a25a25763fff5c3231b3dc 94 Pfam PF03795 YCII-related domain 1 72 1.8E-13 T 22-04-2016 IPR005545 YCII-related AMK43_RS06340 d3f244b803a25a25763fff5c3231b3dc 94 Gene3D G3DSA:3.30.70.1060 5 72 1.5E-12 T 22-04-2016 AMK43_RS01655 084b6ea41bd9bc7cb6afdaee95dd749a 242 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 38 56 - T 22-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 AMK43_RS01655 084b6ea41bd9bc7cb6afdaee95dd749a 242 SUPERFAMILY SSF51366 17 239 3.41E-67 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK43_RS01655 084b6ea41bd9bc7cb6afdaee95dd749a 242 PANTHER PTHR22854 1 238 1.5E-73 T 22-04-2016 AMK43_RS01655 084b6ea41bd9bc7cb6afdaee95dd749a 242 Pfam PF00218 Indole-3-glycerol phosphate synthase 8 238 2.1E-70 T 22-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 AMK43_RS01655 084b6ea41bd9bc7cb6afdaee95dd749a 242 Gene3D G3DSA:3.20.20.70 1 238 8.3E-80 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS01655 084b6ea41bd9bc7cb6afdaee95dd749a 242 PANTHER PTHR22854:SF2 1 238 1.5E-73 T 22-04-2016 AMK43_RS03335 d45f9a4e189dfcbe95df743bdc17b7a6 226 PANTHER PTHR41293:SF1 1 222 1.6E-71 T 22-04-2016 AMK43_RS03335 d45f9a4e189dfcbe95df743bdc17b7a6 226 Pfam PF06149 Protein of unknown function (DUF969) 4 218 2.5E-84 T 22-04-2016 IPR010374 Protein of unknown function DUF969 AMK43_RS03335 d45f9a4e189dfcbe95df743bdc17b7a6 226 PANTHER PTHR41293 1 222 1.6E-71 T 22-04-2016 AMK43_RS08885 5aa21e9ade58ea6b1aae210197127191 199 Gene3D G3DSA:3.40.50.300 3 190 3.0E-43 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08885 5aa21e9ade58ea6b1aae210197127191 199 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 191 25.838 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 AMK43_RS08885 5aa21e9ade58ea6b1aae210197127191 199 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 6 186 3.5E-65 T 22-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 AMK43_RS08885 5aa21e9ade58ea6b1aae210197127191 199 Pfam PF01926 50S ribosome-binding GTPase 26 142 1.9E-21 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS08885 5aa21e9ade58ea6b1aae210197127191 199 SUPERFAMILY SSF52540 18 192 4.28E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08885 5aa21e9ade58ea6b1aae210197127191 199 PANTHER PTHR11649 1 195 1.0E-54 T 22-04-2016 AMK43_RS06700 5dc85191ddd94159cc01c855686a1fe3 263 Pfam PF12138 Spherulation-specific family 4 31 258 1.3E-37 T 22-04-2016 IPR021986 Spherulation-specific family 4 AMK43_RS06700 5dc85191ddd94159cc01c855686a1fe3 263 PANTHER PTHR35040:SF2 25 251 5.2E-31 T 22-04-2016 AMK43_RS06700 5dc85191ddd94159cc01c855686a1fe3 263 PANTHER PTHR35040 25 251 5.2E-31 T 22-04-2016 AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 Gene3D G3DSA:2.40.50.140 1 114 4.3E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 SUPERFAMILY SSF50249 3 125 1.06E-42 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 PIRSF PIRSF002158 3 275 1.8E-87 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 2.9E-124 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 SMART SM01383 42 118 1.5E-34 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 Gene3D G3DSA:2.30.30.30 119 195 9.0E-34 T 22-04-2016 IPR014722 Ribosomal protein L2 domain 2 AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 44 117 4.5E-26 T 22-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 Gene3D G3DSA:4.10.950.10 196 274 6.7E-33 T 22-04-2016 IPR014726 Ribosomal protein L2, domain 3 AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 274 45.723 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 PANTHER PTHR13691:SF5 1 275 7.7E-128 T 22-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 SUPERFAMILY SSF50104 126 273 1.02E-58 T 22-04-2016 IPR008991 Translation protein SH3-like domain AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 22-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 SMART SM01382 124 253 6.5E-89 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 5.2E-55 T 22-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 AMK43_RS00415 f1937a2e22fccaac7b43f6808c5f537d 275 PANTHER PTHR13691 1 275 7.7E-128 T 22-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS07195 3c78bb47a5606030a29c8bb95cea8440 78 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 75 3.2E-16 T 22-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMK43_RS07195 3c78bb47a5606030a29c8bb95cea8440 78 Pfam PF00137 ATP synthase subunit C 11 73 5.8E-15 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMK43_RS07195 3c78bb47a5606030a29c8bb95cea8440 78 Gene3D G3DSA:1.20.20.10 10 75 2.5E-23 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMK43_RS07195 3c78bb47a5606030a29c8bb95cea8440 78 PANTHER PTHR10031 4 77 1.4E-22 T 22-04-2016 AMK43_RS07195 3c78bb47a5606030a29c8bb95cea8440 78 SUPERFAMILY SSF81333 4 75 1.07E-18 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMK43_RS07195 3c78bb47a5606030a29c8bb95cea8440 78 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 76 16.455 T 22-04-2016 AMK43_RS07195 3c78bb47a5606030a29c8bb95cea8440 78 PRINTS PR00124 ATP synthase C subunit signature 11 30 6.9E-23 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMK43_RS07195 3c78bb47a5606030a29c8bb95cea8440 78 PRINTS PR00124 ATP synthase C subunit signature 32 47 6.9E-23 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMK43_RS07195 3c78bb47a5606030a29c8bb95cea8440 78 PRINTS PR00124 ATP synthase C subunit signature 49 74 6.9E-23 T 22-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 AMK43_RS10710 ac879c6bcdcb815590472847aa314e9a 85 Gene3D G3DSA:3.30.70.1150 1 83 5.4E-29 T 22-04-2016 AMK43_RS10710 ac879c6bcdcb815590472847aa314e9a 85 SUPERFAMILY SSF55021 3 80 1.9E-22 T 22-04-2016 AMK43_RS10710 ac879c6bcdcb815590472847aa314e9a 85 TIGRFAM TIGR03959 hyd_TM1266: putative iron-only hydrogenase system regulator 4 79 1.6E-27 T 22-04-2016 IPR023860 [FeFe]-hydrogenase system regulator TM1266 AMK43_RS04345 780eb9371be2a5f7688d651e368fac31 242 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 240 27.661 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS04345 780eb9371be2a5f7688d651e368fac31 242 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 107 239 1.3E-44 T 22-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS04345 780eb9371be2a5f7688d651e368fac31 242 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 46 240 1.1E-61 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS04345 780eb9371be2a5f7688d651e368fac31 242 PIRSF PIRSF000161 1 242 3.5E-70 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS04345 780eb9371be2a5f7688d651e368fac31 242 PANTHER PTHR20836 51 240 1.4E-54 T 22-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS04345 780eb9371be2a5f7688d651e368fac31 242 SUPERFAMILY SSF55347 106 211 8.07E-30 T 22-04-2016 AMK43_RS04345 780eb9371be2a5f7688d651e368fac31 242 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 41 103 3.0E-12 T 22-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS04345 780eb9371be2a5f7688d651e368fac31 242 SUPERFAMILY SSF51735 1 105 2.7E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS04345 780eb9371be2a5f7688d651e368fac31 242 SUPERFAMILY SSF51735 211 241 2.7E-24 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS04345 780eb9371be2a5f7688d651e368fac31 242 Gene3D G3DSA:3.40.50.720 1 112 6.5E-8 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS04345 780eb9371be2a5f7688d651e368fac31 242 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 128 145 - T 22-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 AMK43_RS04345 780eb9371be2a5f7688d651e368fac31 242 Gene3D G3DSA:3.30.360.10 113 208 6.8E-35 T 22-04-2016 AMK43_RS04345 780eb9371be2a5f7688d651e368fac31 242 PANTHER PTHR20836:SF0 51 240 1.4E-54 T 22-04-2016 AMK43_RS03655 e15e16f401ad8932659ca8d13c7abbc2 225 Gene3D G3DSA:3.40.50.2300 1 121 3.6E-40 T 22-04-2016 AMK43_RS03655 e15e16f401ad8932659ca8d13c7abbc2 225 SMART SM00448 1 112 4.1E-42 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS03655 e15e16f401ad8932659ca8d13c7abbc2 225 Gene3D G3DSA:1.10.10.10 123 221 2.4E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03655 e15e16f401ad8932659ca8d13c7abbc2 225 PANTHER PTHR26402 1 221 2.3E-101 T 22-04-2016 AMK43_RS03655 e15e16f401ad8932659ca8d13c7abbc2 225 SUPERFAMILY SSF52172 1 177 3.77E-41 T 22-04-2016 IPR011006 CheY-like superfamily AMK43_RS03655 e15e16f401ad8932659ca8d13c7abbc2 225 Pfam PF00072 Response regulator receiver domain 3 113 8.7E-28 T 22-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 AMK43_RS03655 e15e16f401ad8932659ca8d13c7abbc2 225 SMART SM00862 145 220 1.3E-23 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK43_RS03655 e15e16f401ad8932659ca8d13c7abbc2 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 1.3E-25 T 22-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 AMK43_RS03655 e15e16f401ad8932659ca8d13c7abbc2 225 PANTHER PTHR26402:SF316 1 221 2.3E-101 T 22-04-2016 AMK43_RS01615 38f24537c6c8e6ca9940377c23ed052d 546 Pfam PF13519 von Willebrand factor type A domain 399 502 1.5E-8 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK43_RS01615 38f24537c6c8e6ca9940377c23ed052d 546 SUPERFAMILY SSF53300 396 533 1.2E-15 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK43_RS01615 38f24537c6c8e6ca9940377c23ed052d 546 Gene3D G3DSA:3.40.50.410 399 528 5.9E-6 T 22-04-2016 IPR002035 von Willebrand factor, type A AMK43_RS01615 38f24537c6c8e6ca9940377c23ed052d 546 PANTHER PTHR36846 332 546 6.2E-46 T 22-04-2016 AMK43_RS00220 31c26da3264d8b888336ee9777ce2f5c 512 PANTHER PTHR24095:SF181 1 436 1.0E-43 T 22-04-2016 AMK43_RS00220 31c26da3264d8b888336ee9777ce2f5c 512 PANTHER PTHR24095 1 436 1.0E-43 T 22-04-2016 AMK43_RS00220 31c26da3264d8b888336ee9777ce2f5c 512 ProSitePatterns PS00455 Putative AMP-binding domain signature. 158 169 - T 22-04-2016 IPR020845 AMP-binding, conserved site AMK43_RS00220 31c26da3264d8b888336ee9777ce2f5c 512 SUPERFAMILY SSF56801 2 467 1.16E-60 T 22-04-2016 AMK43_RS00220 31c26da3264d8b888336ee9777ce2f5c 512 Gene3D G3DSA:3.40.50.980 2 162 1.7E-26 T 22-04-2016 AMK43_RS00220 31c26da3264d8b888336ee9777ce2f5c 512 Gene3D G3DSA:2.30.38.10 360 414 1.0E-10 T 22-04-2016 AMK43_RS00220 31c26da3264d8b888336ee9777ce2f5c 512 Gene3D G3DSA:3.40.50.980 163 311 6.5E-21 T 22-04-2016 AMK43_RS00220 31c26da3264d8b888336ee9777ce2f5c 512 Pfam PF00501 AMP-binding enzyme 12 421 4.3E-52 T 22-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 AMK43_RS04740 d4a7ecaf5d4f516cd56cd30a00370f30 443 SUPERFAMILY SSF51556 59 353 5.63E-69 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK43_RS04740 d4a7ecaf5d4f516cd56cd30a00370f30 443 Gene3D G3DSA:2.30.40.10 2 67 4.8E-16 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS04740 d4a7ecaf5d4f516cd56cd30a00370f30 443 PANTHER PTHR11271:SF40 1 441 1.1E-206 T 22-04-2016 AMK43_RS04740 d4a7ecaf5d4f516cd56cd30a00370f30 443 Gene3D G3DSA:3.20.20.140 68 322 1.1E-57 T 22-04-2016 AMK43_RS04740 d4a7ecaf5d4f516cd56cd30a00370f30 443 SUPERFAMILY SSF51338 1 59 2.59E-32 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS04740 d4a7ecaf5d4f516cd56cd30a00370f30 443 SUPERFAMILY SSF51338 365 440 2.59E-32 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS04740 d4a7ecaf5d4f516cd56cd30a00370f30 443 Gene3D G3DSA:2.30.40.10 323 418 5.0E-24 T 22-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 AMK43_RS04740 d4a7ecaf5d4f516cd56cd30a00370f30 443 PANTHER PTHR11271 1 441 1.1E-206 T 22-04-2016 AMK43_RS04740 d4a7ecaf5d4f516cd56cd30a00370f30 443 Pfam PF01979 Amidohydrolase family 56 414 1.2E-38 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK43_RS04740 d4a7ecaf5d4f516cd56cd30a00370f30 443 TIGRFAM TIGR03314 Se_ssnA: putative selenium metabolism protein SsnA 2 443 1.1E-192 T 22-04-2016 IPR017700 Putative selenium metabolism protein SsnA AMK43_RS10785 2d784b2fd035303aa59cd44861019ea4 507 PANTHER PTHR33843:SF5 119 261 6.3E-101 T 22-04-2016 AMK43_RS10785 2d784b2fd035303aa59cd44861019ea4 507 PANTHER PTHR33843:SF5 277 503 6.3E-101 T 22-04-2016 AMK43_RS10785 2d784b2fd035303aa59cd44861019ea4 507 PANTHER PTHR33843:SF5 2 102 6.3E-101 T 22-04-2016 AMK43_RS10785 2d784b2fd035303aa59cd44861019ea4 507 Pfam PF03611 PTS system sugar-specific permease component 14 450 2.7E-108 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AMK43_RS10785 2d784b2fd035303aa59cd44861019ea4 507 PANTHER PTHR33843 119 261 6.3E-101 T 22-04-2016 AMK43_RS10785 2d784b2fd035303aa59cd44861019ea4 507 PANTHER PTHR33843 277 503 6.3E-101 T 22-04-2016 AMK43_RS10785 2d784b2fd035303aa59cd44861019ea4 507 PANTHER PTHR33843 2 102 6.3E-101 T 22-04-2016 AMK43_RS04535 102b4be057e4603e0f8950d364288381 221 PANTHER PTHR18901 1 193 3.7E-38 T 22-04-2016 AMK43_RS04535 102b4be057e4603e0f8950d364288381 221 SUPERFAMILY SSF56784 1 219 1.2E-42 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS04535 102b4be057e4603e0f8950d364288381 221 PANTHER PTHR18901:SF14 1 193 3.7E-38 T 22-04-2016 AMK43_RS04535 102b4be057e4603e0f8950d364288381 221 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 60 184 2.0E-8 T 22-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 AMK43_RS04535 102b4be057e4603e0f8950d364288381 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 188 1.8E-37 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS04535 102b4be057e4603e0f8950d364288381 221 Gene3D G3DSA:1.10.150.240 19 81 2.0E-7 T 22-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 AMK43_RS04535 102b4be057e4603e0f8950d364288381 221 Gene3D G3DSA:3.40.50.1000 82 219 6.2E-29 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS04710 37f627c896df9ea8f4f08c9c416e6d8c 209 Gene3D G3DSA:3.40.50.360 1 58 3.2E-6 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS04710 37f627c896df9ea8f4f08c9c416e6d8c 209 Gene3D G3DSA:3.40.50.360 59 127 2.3E-5 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS04710 37f627c896df9ea8f4f08c9c416e6d8c 209 SUPERFAMILY SSF52218 1 127 3.06E-15 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS06570 eb05dbb1108bac3515763a9dfa7eb140 159 PIRSF PIRSF001338 1 159 7.8E-63 T 22-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 AMK43_RS06570 eb05dbb1108bac3515763a9dfa7eb140 159 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 155 2.3E-58 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK43_RS06570 eb05dbb1108bac3515763a9dfa7eb140 159 Gene3D G3DSA:3.40.50.7700 1 155 9.1E-66 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK43_RS06570 eb05dbb1108bac3515763a9dfa7eb140 159 SUPERFAMILY SSF52255 1 156 1.06E-58 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK43_RS06570 eb05dbb1108bac3515763a9dfa7eb140 159 SMART SM01001 1 149 1.4E-82 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK43_RS06570 eb05dbb1108bac3515763a9dfa7eb140 159 PANTHER PTHR23046 2 155 3.1E-76 T 22-04-2016 AMK43_RS06570 eb05dbb1108bac3515763a9dfa7eb140 159 PANTHER PTHR23046:SF2 2 155 3.1E-76 T 22-04-2016 AMK43_RS06570 eb05dbb1108bac3515763a9dfa7eb140 159 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 153 30.987 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK43_RS06570 eb05dbb1108bac3515763a9dfa7eb140 159 Pfam PF00731 AIR carboxylase 2 147 6.9E-61 T 22-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 AMK43_RS01095 7e8625ab0af1e423fa674fcbec8f5ac9 238 ProSitePatterns PS00958 Transaldolase active site. 83 100 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK43_RS01095 7e8625ab0af1e423fa674fcbec8f5ac9 238 PANTHER PTHR10683:SF11 1 233 1.1E-67 T 22-04-2016 AMK43_RS01095 7e8625ab0af1e423fa674fcbec8f5ac9 238 PANTHER PTHR10683 1 233 1.1E-67 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK43_RS01095 7e8625ab0af1e423fa674fcbec8f5ac9 238 Pfam PF00923 Transaldolase 4 223 3.1E-41 T 22-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK43_RS01095 7e8625ab0af1e423fa674fcbec8f5ac9 238 SUPERFAMILY SSF51569 1 230 1.05E-57 T 22-04-2016 AMK43_RS01095 7e8625ab0af1e423fa674fcbec8f5ac9 238 Gene3D G3DSA:3.20.20.70 1 228 5.6E-54 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS01095 7e8625ab0af1e423fa674fcbec8f5ac9 238 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 22-04-2016 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 AMK43_RS07335 56744bd3547f1d118c736981ed7ec4f3 404 SUPERFAMILY SSF52540 8 226 5.05E-49 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07335 56744bd3547f1d118c736981ed7ec4f3 404 Gene3D G3DSA:1.20.272.10 234 330 6.5E-42 T 22-04-2016 AMK43_RS07335 56744bd3547f1d118c736981ed7ec4f3 404 Gene3D G3DSA:1.10.8.60 154 226 3.5E-14 T 22-04-2016 AMK43_RS07335 56744bd3547f1d118c736981ed7ec4f3 404 Pfam PF12002 MgsA AAA+ ATPase C terminal 251 403 4.5E-58 T 22-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal AMK43_RS07335 56744bd3547f1d118c736981ed7ec4f3 404 Gene3D G3DSA:3.40.50.300 7 153 4.7E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07335 56744bd3547f1d118c736981ed7ec4f3 404 SUPERFAMILY SSF48019 236 403 1.42E-59 T 22-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 AMK43_RS07335 56744bd3547f1d118c736981ed7ec4f3 404 PANTHER PTHR13779 9 404 1.6E-152 T 22-04-2016 AMK43_RS07335 56744bd3547f1d118c736981ed7ec4f3 404 Pfam PF16193 AAA C-terminal domain 179 250 1.3E-14 T 22-04-2016 IPR032423 AAA ATPase, C-terminal domain AMK43_RS07335 56744bd3547f1d118c736981ed7ec4f3 404 Gene3D G3DSA:1.10.3710.10 332 395 8.2E-18 T 22-04-2016 AMK43_RS07335 56744bd3547f1d118c736981ed7ec4f3 404 SMART SM00382 47 167 3.7E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS07335 56744bd3547f1d118c736981ed7ec4f3 404 PANTHER PTHR13779:SF7 9 404 1.6E-152 T 22-04-2016 AMK43_RS07335 56744bd3547f1d118c736981ed7ec4f3 404 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 13 138 5.9E-14 T 22-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 AMK43_RS03465 5e9739b5a0b072d9762a5f15ae1cbda0 372 PANTHER PTHR10283:SF90 1 164 1.4E-104 T 22-04-2016 AMK43_RS03465 5e9739b5a0b072d9762a5f15ae1cbda0 372 PANTHER PTHR10283:SF90 187 367 1.4E-104 T 22-04-2016 AMK43_RS03465 5e9739b5a0b072d9762a5f15ae1cbda0 372 PANTHER PTHR10283 1 164 1.4E-104 T 22-04-2016 AMK43_RS03465 5e9739b5a0b072d9762a5f15ae1cbda0 372 PANTHER PTHR10283 187 367 1.4E-104 T 22-04-2016 AMK43_RS03465 5e9739b5a0b072d9762a5f15ae1cbda0 372 Pfam PF03606 C4-dicarboxylate anaerobic carrier 1 369 4.2E-107 T 22-04-2016 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 AMK43_RS09000 764f0cde25d1b7ea228697aa4b412637 190 Pfam PF02632 BioY family 46 186 6.3E-37 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 AMK43_RS09000 764f0cde25d1b7ea228697aa4b412637 190 PANTHER PTHR34295 11 190 9.8E-43 T 22-04-2016 AMK43_RS09000 764f0cde25d1b7ea228697aa4b412637 190 PIRSF PIRSF016661 9 190 2.4E-45 T 22-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 AMK43_RS09000 764f0cde25d1b7ea228697aa4b412637 190 PANTHER PTHR34295:SF1 11 190 9.8E-43 T 22-04-2016 AMK43_RS09575 85b0b3954997b4e69a004d3a11724a0b 241 SUPERFAMILY SSF48452 65 165 3.8E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS09575 85b0b3954997b4e69a004d3a11724a0b 241 Gene3D G3DSA:1.25.40.10 65 192 3.4E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS01040 18d84f01c4c43daa2790d23d9604a3e4 145 SUPERFAMILY SSF82649 1 141 5.23E-37 T 22-04-2016 AMK43_RS01040 18d84f01c4c43daa2790d23d9604a3e4 145 Pfam PF01592 NifU-like N terminal domain 30 128 4.1E-16 T 22-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 AMK43_RS01040 18d84f01c4c43daa2790d23d9604a3e4 145 Gene3D G3DSA:3.90.1010.10 6 144 1.1E-33 T 22-04-2016 AMK43_RS01040 18d84f01c4c43daa2790d23d9604a3e4 145 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 3 137 2.8E-50 T 22-04-2016 AMK43_RS01040 18d84f01c4c43daa2790d23d9604a3e4 145 PANTHER PTHR10093 23 88 1.8E-16 T 22-04-2016 AMK43_RS01040 18d84f01c4c43daa2790d23d9604a3e4 145 PANTHER PTHR10093 105 133 1.8E-16 T 22-04-2016 AMK43_RS03415 12d31f04232648d3c62e3bebb02da25b 252 SUPERFAMILY SSF46565 182 240 1.83E-13 T 22-04-2016 IPR001623 DnaJ domain AMK43_RS03415 12d31f04232648d3c62e3bebb02da25b 252 Pfam PF00226 DnaJ domain 188 237 1.4E-9 T 22-04-2016 IPR001623 DnaJ domain AMK43_RS03415 12d31f04232648d3c62e3bebb02da25b 252 Gene3D G3DSA:1.10.287.110 183 241 2.5E-14 T 22-04-2016 IPR001623 DnaJ domain AMK43_RS03415 12d31f04232648d3c62e3bebb02da25b 252 SMART SM00271 184 242 8.4E-13 T 22-04-2016 IPR001623 DnaJ domain AMK43_RS01930 519e3c9f52f5bca830a77b47bb4877b7 332 Gene3D G3DSA:3.20.20.70 18 321 9.5E-113 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS01930 519e3c9f52f5bca830a77b47bb4877b7 332 PANTHER PTHR10578:SF3 227 329 1.3E-99 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 AMK43_RS01930 519e3c9f52f5bca830a77b47bb4877b7 332 PANTHER PTHR10578:SF3 14 210 1.3E-99 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 AMK43_RS01930 519e3c9f52f5bca830a77b47bb4877b7 332 PANTHER PTHR10578 227 329 1.3E-99 T 22-04-2016 AMK43_RS01930 519e3c9f52f5bca830a77b47bb4877b7 332 PANTHER PTHR10578 14 210 1.3E-99 T 22-04-2016 AMK43_RS01930 519e3c9f52f5bca830a77b47bb4877b7 332 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 2 323 2.5E-113 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 AMK43_RS01930 519e3c9f52f5bca830a77b47bb4877b7 332 PIRSF PIRSF003314 1 331 2.5E-109 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 AMK43_RS01930 519e3c9f52f5bca830a77b47bb4877b7 332 Pfam PF01070 FMN-dependent dehydrogenase 158 317 3.8E-18 T 22-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 AMK43_RS01930 519e3c9f52f5bca830a77b47bb4877b7 332 SUPERFAMILY SSF51395 19 327 9.62E-73 T 22-04-2016 AMK43_RS01930 519e3c9f52f5bca830a77b47bb4877b7 332 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 1 324 33.375 T 22-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 AMK43_RS00825 383ef8fbf195872dc6fdaffbad4e9344 268 PANTHER PTHR24220 3 239 7.8E-97 T 22-04-2016 AMK43_RS00825 383ef8fbf195872dc6fdaffbad4e9344 268 Gene3D G3DSA:3.40.50.300 1 229 1.2E-67 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00825 383ef8fbf195872dc6fdaffbad4e9344 268 SUPERFAMILY SSF52540 1 229 2.08E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00825 383ef8fbf195872dc6fdaffbad4e9344 268 SMART SM00382 27 214 2.1E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS00825 383ef8fbf195872dc6fdaffbad4e9344 268 PANTHER PTHR24220:SF66 3 239 7.8E-97 T 22-04-2016 AMK43_RS00825 383ef8fbf195872dc6fdaffbad4e9344 268 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS00825 383ef8fbf195872dc6fdaffbad4e9344 268 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 11 200 6.7E-71 T 22-04-2016 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 AMK43_RS00825 383ef8fbf195872dc6fdaffbad4e9344 268 Pfam PF00005 ABC transporter 18 166 6.4E-34 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS11145 16559d1ab65eb80dff627e9aad2e8d33 246 SMART SM00382 53 224 3.8E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS11145 16559d1ab65eb80dff627e9aad2e8d33 246 SUPERFAMILY SSF52540 40 238 3.77E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11145 16559d1ab65eb80dff627e9aad2e8d33 246 Pfam PF00005 ABC transporter 44 175 3.2E-20 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS11145 16559d1ab65eb80dff627e9aad2e8d33 246 PANTHER PTHR24220:SF117 7 17 1.8E-97 T 22-04-2016 AMK43_RS11145 16559d1ab65eb80dff627e9aad2e8d33 246 PANTHER PTHR24220:SF117 41 246 1.8E-97 T 22-04-2016 AMK43_RS11145 16559d1ab65eb80dff627e9aad2e8d33 246 PANTHER PTHR24220 7 17 1.8E-97 T 22-04-2016 AMK43_RS11145 16559d1ab65eb80dff627e9aad2e8d33 246 PANTHER PTHR24220 41 246 1.8E-97 T 22-04-2016 AMK43_RS11145 16559d1ab65eb80dff627e9aad2e8d33 246 Gene3D G3DSA:3.40.50.300 2 244 1.5E-53 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01805 a1656002831ed76eb1901b43775682df 344 SMART SM00450 6 135 3.5E-16 T 22-04-2016 IPR001763 Rhodanese-like domain AMK43_RS01805 a1656002831ed76eb1901b43775682df 344 PANTHER PTHR30401:SF0 21 276 6.9E-64 T 22-04-2016 AMK43_RS01805 a1656002831ed76eb1901b43775682df 344 Gene3D G3DSA:3.40.250.10 7 125 6.3E-31 T 22-04-2016 IPR001763 Rhodanese-like domain AMK43_RS01805 a1656002831ed76eb1901b43775682df 344 SUPERFAMILY SSF52540 140 310 1.78E-9 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01805 a1656002831ed76eb1901b43775682df 344 Pfam PF00581 Rhodanese-like domain 8 130 2.1E-10 T 22-04-2016 IPR001763 Rhodanese-like domain AMK43_RS01805 a1656002831ed76eb1901b43775682df 344 SUPERFAMILY SSF52821 6 58 3.27E-23 T 22-04-2016 IPR001763 Rhodanese-like domain AMK43_RS01805 a1656002831ed76eb1901b43775682df 344 SUPERFAMILY SSF52821 85 133 3.27E-23 T 22-04-2016 IPR001763 Rhodanese-like domain AMK43_RS01805 a1656002831ed76eb1901b43775682df 344 PANTHER PTHR30401 21 276 6.9E-64 T 22-04-2016 AMK43_RS01805 a1656002831ed76eb1901b43775682df 344 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 21 321 1.6E-95 T 22-04-2016 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 AMK43_RS01805 a1656002831ed76eb1901b43775682df 344 Gene3D G3DSA:3.40.50.300 157 305 5.3E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01805 a1656002831ed76eb1901b43775682df 344 Gene3D G3DSA:3.40.50.300 126 156 6.9E-4 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04280 170e71bbe731966ae605fea92591107e 387 Pfam PF12704 MacB-like periplasmic core domain 18 221 2.7E-15 T 22-04-2016 IPR025857 MacB-like periplasmic core domain AMK43_RS04280 170e71bbe731966ae605fea92591107e 387 Pfam PF02687 FtsX-like permease family 256 380 8.7E-17 T 22-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 AMK43_RS04280 170e71bbe731966ae605fea92591107e 387 PANTHER PTHR30489 1 387 1.8E-66 T 22-04-2016 AMK43_RS03350 1d1c21fe03a1660c5cb57be45aaa7ed6 187 PANTHER PTHR32125 40 169 8.8E-19 T 22-04-2016 AMK43_RS03350 1d1c21fe03a1660c5cb57be45aaa7ed6 187 Gene3D G3DSA:3.40.1280.10 2 187 1.7E-84 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK43_RS03350 1d1c21fe03a1660c5cb57be45aaa7ed6 187 Pfam PF09936 SAM-dependent RNA methyltransferase 4 185 5.5E-80 T 22-04-2016 IPR019230 RNA methyltransferase domain AMK43_RS03350 1d1c21fe03a1660c5cb57be45aaa7ed6 187 PANTHER PTHR32125:SF5 40 169 8.8E-19 T 22-04-2016 AMK43_RS00025 e0926eee379fa17aef271dbed0afcdef 306 SUPERFAMILY SSF82708 255 303 1.88E-9 T 22-04-2016 IPR001374 R3H domain GO:0003676 AMK43_RS00025 e0926eee379fa17aef271dbed0afcdef 306 Pfam PF01424 R3H domain 244 303 3.7E-15 T 22-04-2016 IPR001374 R3H domain GO:0003676 AMK43_RS00025 e0926eee379fa17aef271dbed0afcdef 306 Gene3D G3DSA:3.30.1370.50 236 303 4.8E-24 T 22-04-2016 IPR001374 R3H domain GO:0003676 AMK43_RS00025 e0926eee379fa17aef271dbed0afcdef 306 PANTHER PTHR35800 156 306 6.4E-33 T 22-04-2016 AMK43_RS00025 e0926eee379fa17aef271dbed0afcdef 306 PANTHER PTHR35800 2 57 6.4E-33 T 22-04-2016 AMK43_RS00025 e0926eee379fa17aef271dbed0afcdef 306 Gene3D G3DSA:3.30.300.120 162 234 2.3E-12 T 22-04-2016 AMK43_RS00025 e0926eee379fa17aef271dbed0afcdef 306 SMART SM00393 225 304 6.3E-15 T 22-04-2016 IPR001374 R3H domain GO:0003676 AMK43_RS05705 3aca66432a9353719af6d93489c8b4fa 398 Gene3D G3DSA:3.90.1150.10 274 396 1.7E-19 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS05705 3aca66432a9353719af6d93489c8b4fa 398 Pfam PF00155 Aminotransferase class I and II 57 385 2.9E-42 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK43_RS05705 3aca66432a9353719af6d93489c8b4fa 398 SUPERFAMILY SSF53383 1 393 1.43E-87 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS05705 3aca66432a9353719af6d93489c8b4fa 398 PANTHER PTHR11751:SF404 10 398 1.7E-134 T 22-04-2016 AMK43_RS05705 3aca66432a9353719af6d93489c8b4fa 398 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 196 219 1.2E-11 T 22-04-2016 AMK43_RS05705 3aca66432a9353719af6d93489c8b4fa 398 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 227 251 1.2E-11 T 22-04-2016 AMK43_RS05705 3aca66432a9353719af6d93489c8b4fa 398 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 160 184 1.2E-11 T 22-04-2016 AMK43_RS05705 3aca66432a9353719af6d93489c8b4fa 398 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 112 133 1.2E-11 T 22-04-2016 AMK43_RS05705 3aca66432a9353719af6d93489c8b4fa 398 PANTHER PTHR11751 10 398 1.7E-134 T 22-04-2016 AMK43_RS05705 3aca66432a9353719af6d93489c8b4fa 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 233 246 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AMK43_RS05705 3aca66432a9353719af6d93489c8b4fa 398 Gene3D G3DSA:3.40.640.10 55 273 4.6E-64 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS06645 9f0e93708c0024ec91ea87988291bd65 244 Pfam PF03591 AzlC protein 20 157 8.3E-29 T 22-04-2016 IPR011606 Branched-chain amino acid transport, permease AMK43_RS06645 9f0e93708c0024ec91ea87988291bd65 244 PANTHER PTHR34979 1 236 6.7E-24 T 22-04-2016 AMK43_RS06250 ef9bc1e72fcdc8ae108468b521a07c99 337 Pfam PF12889 Protein of unknown function (DUF3829) 52 311 7.4E-30 T 22-04-2016 IPR024291 Protein of unknown function DUF3829 AMK43_RS07895 8fd1ed2f386f0f1a4beb4ccc6bfa58bd 404 Pfam PF05193 Peptidase M16 inactive domain 164 338 7.8E-36 T 22-04-2016 IPR007863 Peptidase M16, C-terminal AMK43_RS07895 8fd1ed2f386f0f1a4beb4ccc6bfa58bd 404 SUPERFAMILY SSF63411 4 208 5.17E-53 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMK43_RS07895 8fd1ed2f386f0f1a4beb4ccc6bfa58bd 404 PANTHER PTHR11851 2 400 6.1E-93 T 22-04-2016 AMK43_RS07895 8fd1ed2f386f0f1a4beb4ccc6bfa58bd 404 Gene3D G3DSA:3.30.830.10 225 400 6.2E-37 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMK43_RS07895 8fd1ed2f386f0f1a4beb4ccc6bfa58bd 404 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 22-04-2016 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 AMK43_RS07895 8fd1ed2f386f0f1a4beb4ccc6bfa58bd 404 Gene3D G3DSA:3.30.830.10 3 207 3.5E-51 T 22-04-2016 IPR011237 Peptidase M16 domain GO:0046872 AMK43_RS07895 8fd1ed2f386f0f1a4beb4ccc6bfa58bd 404 Pfam PF00675 Insulinase (Peptidase family M16) 21 158 9.7E-34 T 22-04-2016 IPR011765 Peptidase M16, N-terminal AMK43_RS07895 8fd1ed2f386f0f1a4beb4ccc6bfa58bd 404 SUPERFAMILY SSF63411 228 401 6.11E-39 T 22-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 AMK43_RS06690 458fe97626a46dc8901d72a083c942e2 417 Pfam PF01545 Cation efflux family 140 331 1.1E-39 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK43_RS06690 458fe97626a46dc8901d72a083c942e2 417 PANTHER PTHR11562:SF55 125 411 3.5E-53 T 22-04-2016 AMK43_RS06690 458fe97626a46dc8901d72a083c942e2 417 Pfam PF16916 Dimerisation domain of Zinc Transporter 335 412 1.2E-16 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain AMK43_RS06690 458fe97626a46dc8901d72a083c942e2 417 SUPERFAMILY SSF161111 132 332 3.4E-39 T 22-04-2016 AMK43_RS06690 458fe97626a46dc8901d72a083c942e2 417 Pfam PF13673 Acetyltransferase (GNAT) domain 34 120 2.5E-5 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS06690 458fe97626a46dc8901d72a083c942e2 417 SUPERFAMILY SSF160240 334 412 7.98E-17 T 22-04-2016 AMK43_RS06690 458fe97626a46dc8901d72a083c942e2 417 PANTHER PTHR11562 125 411 3.5E-53 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK43_RS06690 458fe97626a46dc8901d72a083c942e2 417 Gene3D G3DSA:3.30.70.1350 333 412 1.6E-18 T 22-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain AMK43_RS06690 458fe97626a46dc8901d72a083c942e2 417 Gene3D G3DSA:1.20.1510.10 139 331 3.8E-33 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain AMK43_RS06690 458fe97626a46dc8901d72a083c942e2 417 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 139 412 4.6E-55 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK43_RS06690 458fe97626a46dc8901d72a083c942e2 417 SUPERFAMILY SSF55729 26 120 5.06E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS06690 458fe97626a46dc8901d72a083c942e2 417 Gene3D G3DSA:3.40.630.30 26 113 6.4E-11 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS07430 2ac46cb4cfa787f04eeeab78d7f721f9 251 PANTHER PTHR21666:SF210 135 245 1.8E-29 T 22-04-2016 AMK43_RS07430 2ac46cb4cfa787f04eeeab78d7f721f9 251 PANTHER PTHR21666 135 245 1.8E-29 T 22-04-2016 AMK43_RS07430 2ac46cb4cfa787f04eeeab78d7f721f9 251 Gene3D G3DSA:3.90.1720.10 129 246 1.3E-37 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK43_RS07430 2ac46cb4cfa787f04eeeab78d7f721f9 251 Pfam PF00877 NlpC/P60 family 140 240 3.3E-27 T 22-04-2016 IPR000064 Endopeptidase, NLPC/P60 domain KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- AMK43_RS07430 2ac46cb4cfa787f04eeeab78d7f721f9 251 SUPERFAMILY SSF54001 130 245 1.18E-32 T 22-04-2016 AMK43_RS11065 754ecf61edaab669de4b60c6b79753c6 154 SUPERFAMILY SSF52788 1 147 6.15E-42 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMK43_RS11065 754ecf61edaab669de4b60c6b79753c6 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 144 1.9E-38 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMK43_RS11065 754ecf61edaab669de4b60c6b79753c6 154 PANTHER PTHR11717 1 148 1.1E-41 T 22-04-2016 AMK43_RS11065 754ecf61edaab669de4b60c6b79753c6 154 SMART SM00226 2 146 1.0E-42 T 22-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily AMK43_RS11065 754ecf61edaab669de4b60c6b79753c6 154 Gene3D G3DSA:3.40.50.270 1 149 3.2E-46 T 22-04-2016 AMK43_RS11065 754ecf61edaab669de4b60c6b79753c6 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 2.1E-13 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMK43_RS11065 754ecf61edaab669de4b60c6b79753c6 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 80 95 2.1E-13 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMK43_RS11065 754ecf61edaab669de4b60c6b79753c6 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 2.1E-13 T 22-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 AMK43_RS02855 f2d17ae4925723680fe04d4c712e6ec6 116 Pfam PF03960 ArsC family 40 113 7.2E-16 T 22-04-2016 IPR006660 Arsenate reductase-like AMK43_RS02855 f2d17ae4925723680fe04d4c712e6ec6 116 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 114 2.3E-36 T 22-04-2016 IPR006504 Transcriptional regulator Spx/MgsR AMK43_RS02855 f2d17ae4925723680fe04d4c712e6ec6 116 SUPERFAMILY SSF52833 2 115 2.19E-32 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS02855 f2d17ae4925723680fe04d4c712e6ec6 116 PANTHER PTHR30041 1 113 3.8E-36 T 22-04-2016 AMK43_RS02855 f2d17ae4925723680fe04d4c712e6ec6 116 PANTHER PTHR30041:SF3 1 113 3.8E-36 T 22-04-2016 AMK43_RS02855 f2d17ae4925723680fe04d4c712e6ec6 116 Gene3D G3DSA:3.40.30.10 1 113 3.7E-38 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 Gene3D G3DSA:3.90.110.10 167 437 4.6E-101 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 1.1E-57 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 1.1E-57 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 1.1E-57 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 1.1E-57 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 1.1E-57 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 1.1E-57 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 1.1E-57 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 PANTHER PTHR32092:SF7 1 440 0.0 T 22-04-2016 AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 138 169 - T 22-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 SUPERFAMILY SSF51735 3 164 6.9E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 Gene3D G3DSA:3.40.50.720 1 165 7.3E-66 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 Pfam PF02056 Family 4 glycosyl hydrolase 5 184 5.3E-67 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 PANTHER PTHR32092 1 440 0.0 T 22-04-2016 AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 415 8.7E-51 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AMK43_RS03585 088fb34600ee93eda7cf7200ff875f0c 440 SUPERFAMILY SSF56327 168 440 1.62E-94 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMK43_RS02115 15bf9c7ad0e3e52a6b83f3b0d37e9919 211 Pfam PF14436 Bacterial EndoU nuclease 85 205 6.1E-25 T 22-04-2016 IPR029501 Bacterial EndoU nuclease AMK43_RS05235 6d17aaa045f9add7d297c2d69b84a0be 214 TIGRFAM TIGR00309 V_ATPase_subD: V-type ATPase, D subunit 5 212 1.4E-50 T 22-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 AMK43_RS05235 6d17aaa045f9add7d297c2d69b84a0be 214 PANTHER PTHR11671:SF2 1 213 9.6E-89 T 22-04-2016 AMK43_RS05235 6d17aaa045f9add7d297c2d69b84a0be 214 PANTHER PTHR11671 1 213 9.6E-89 T 22-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 AMK43_RS05235 6d17aaa045f9add7d297c2d69b84a0be 214 Pfam PF01813 ATP synthase subunit D 12 206 8.6E-56 T 22-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 AMK43_RS05235 6d17aaa045f9add7d297c2d69b84a0be 214 Hamap MF_00271 V-type ATP synthase subunit D [atpD]. 3 212 21.136 T 22-04-2016 IPR002699 ATPase, V1 complex, subunit D GO:0042626 AMK43_RS08905 478fd3d167bfc5b2821576a049bbea42 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.2E-70 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 AMK43_RS08905 478fd3d167bfc5b2821576a049bbea42 185 Gene3D G3DSA:1.10.132.20 66 185 7.8E-42 T 22-04-2016 IPR023584 Ribosome recycling factor domain AMK43_RS08905 478fd3d167bfc5b2821576a049bbea42 185 Pfam PF01765 Ribosome recycling factor 21 183 1.9E-60 T 22-04-2016 IPR023584 Ribosome recycling factor domain AMK43_RS08905 478fd3d167bfc5b2821576a049bbea42 185 PANTHER PTHR20982 1 185 1.4E-76 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 AMK43_RS08905 478fd3d167bfc5b2821576a049bbea42 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.186 T 22-04-2016 IPR002661 Ribosome recycling factor GO:0006412 AMK43_RS08905 478fd3d167bfc5b2821576a049bbea42 185 SUPERFAMILY SSF55194 3 184 1.83E-69 T 22-04-2016 IPR023584 Ribosome recycling factor domain AMK43_RS09255 48e8b7cd3f37de1561b4170ecfd4e251 138 Gene3D G3DSA:3.20.20.210 1 135 9.2E-29 T 22-04-2016 AMK43_RS09255 48e8b7cd3f37de1561b4170ecfd4e251 138 SUPERFAMILY SSF51726 1 137 3.66E-22 T 22-04-2016 AMK43_RS09255 48e8b7cd3f37de1561b4170ecfd4e251 138 PANTHER PTHR30519 1 136 7.1E-21 T 22-04-2016 AMK43_RS09255 48e8b7cd3f37de1561b4170ecfd4e251 138 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 28 109 3.7E-11 T 22-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 AMK43_RS04690 fd7838fd972fea641912165ae0927d3d 114 PANTHER PTHR10986 2 114 4.2E-56 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK43_RS04690 fd7838fd972fea641912165ae0927d3d 114 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-8 T 22-04-2016 AMK43_RS04690 fd7838fd972fea641912165ae0927d3d 114 PANTHER PTHR10986:SF12 2 114 4.2E-56 T 22-04-2016 AMK43_RS04690 fd7838fd972fea641912165ae0927d3d 114 SUPERFAMILY SSF74731 2 114 3.66E-45 T 22-04-2016 AMK43_RS04690 fd7838fd972fea641912165ae0927d3d 114 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 114 25.791 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK43_RS04690 fd7838fd972fea641912165ae0927d3d 114 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK43_RS04690 fd7838fd972fea641912165ae0927d3d 114 Gene3D G3DSA:1.10.1900.20 55 114 1.5E-29 T 22-04-2016 AMK43_RS04690 fd7838fd972fea641912165ae0927d3d 114 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.0E-36 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK43_RS04690 fd7838fd972fea641912165ae0927d3d 114 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.0E-36 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK43_RS04690 fd7838fd972fea641912165ae0927d3d 114 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.0E-36 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK43_RS04690 fd7838fd972fea641912165ae0927d3d 114 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.5E-47 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK43_RS04690 fd7838fd972fea641912165ae0927d3d 114 Pfam PF00453 Ribosomal protein L20 3 109 5.0E-45 T 22-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 AMK43_RS00280 eac92bd2211ca59c2e88b157e7050360 362 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 360 22.849 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS00280 eac92bd2211ca59c2e88b157e7050360 362 ProSitePatterns PS01348 MraY family signature 2. 191 202 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS00280 eac92bd2211ca59c2e88b157e7050360 362 Pfam PF00953 Glycosyl transferase family 4 100 286 8.3E-37 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS00280 eac92bd2211ca59c2e88b157e7050360 362 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 1.1E-5 T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS00280 eac92bd2211ca59c2e88b157e7050360 362 PANTHER PTHR22926 2 362 5.4E-133 T 22-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS00280 eac92bd2211ca59c2e88b157e7050360 362 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 38 362 8.5E-105 T 22-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS00280 eac92bd2211ca59c2e88b157e7050360 362 PANTHER PTHR22926:SF5 2 362 5.4E-133 T 22-04-2016 AMK43_RS00280 eac92bd2211ca59c2e88b157e7050360 362 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 22-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS00135 a80be1ec3bd25140fdd7eaff8348b725 338 PANTHER PTHR11019 87 337 1.9E-23 T 22-04-2016 AMK43_RS00135 a80be1ec3bd25140fdd7eaff8348b725 338 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 305 320 2.43E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK43_RS00135 a80be1ec3bd25140fdd7eaff8348b725 338 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 320 336 2.43E-7 T 22-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 AMK43_RS00135 a80be1ec3bd25140fdd7eaff8348b725 338 Gene3D G3DSA:2.60.120.10 90 122 5.2E-4 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK43_RS00135 a80be1ec3bd25140fdd7eaff8348b725 338 SUPERFAMILY SSF46689 289 338 1.84E-10 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS00135 a80be1ec3bd25140fdd7eaff8348b725 338 Gene3D G3DSA:1.10.10.60 239 288 2.3E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS00135 a80be1ec3bd25140fdd7eaff8348b725 338 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 289 332 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK43_RS00135 a80be1ec3bd25140fdd7eaff8348b725 338 Pfam PF12833 Helix-turn-helix domain 258 337 6.1E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS00135 a80be1ec3bd25140fdd7eaff8348b725 338 Gene3D G3DSA:1.10.10.60 289 338 1.1E-15 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS00135 a80be1ec3bd25140fdd7eaff8348b725 338 SMART SM00342 252 336 6.8E-27 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS05590 59618d8650810d0e55b27feb0a49fd15 820 PANTHER PTHR11468:SF3 1 816 0.0 T 22-04-2016 AMK43_RS05590 59618d8650810d0e55b27feb0a49fd15 820 Gene3D G3DSA:3.40.50.2000 474 795 2.5E-131 T 22-04-2016 AMK43_RS05590 59618d8650810d0e55b27feb0a49fd15 820 Pfam PF00343 Carbohydrate phosphorylase 93 810 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK43_RS05590 59618d8650810d0e55b27feb0a49fd15 820 PIRSF PIRSF000460 2 820 1.6E-237 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK43_RS05590 59618d8650810d0e55b27feb0a49fd15 820 SUPERFAMILY SSF53756 4 815 0.0 T 22-04-2016 AMK43_RS05590 59618d8650810d0e55b27feb0a49fd15 820 PANTHER PTHR11468 1 816 0.0 T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK43_RS05590 59618d8650810d0e55b27feb0a49fd15 820 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 648 660 - T 22-04-2016 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK43_RS05590 59618d8650810d0e55b27feb0a49fd15 820 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 5 810 0.0 T 22-04-2016 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: REACT_474 AMK43_RS05590 59618d8650810d0e55b27feb0a49fd15 820 Gene3D G3DSA:3.40.50.2000 4 473 9.8E-205 T 22-04-2016 AMK43_RS03830 89139031567e22b862b167d8ad7453dc 292 PANTHER PTHR30589 198 292 1.0E-71 T 22-04-2016 AMK43_RS03830 89139031567e22b862b167d8ad7453dc 292 PANTHER PTHR30589 1 173 1.0E-71 T 22-04-2016 AMK43_RS03830 89139031567e22b862b167d8ad7453dc 292 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 1 289 16.058 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AMK43_RS03830 89139031567e22b862b167d8ad7453dc 292 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 3 282 3.7E-66 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AMK43_RS03830 89139031567e22b862b167d8ad7453dc 292 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 2 289 5.2E-56 T 22-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 AMK43_RS03830 89139031567e22b862b167d8ad7453dc 292 PANTHER PTHR30589:SF0 198 292 1.0E-71 T 22-04-2016 AMK43_RS03830 89139031567e22b862b167d8ad7453dc 292 PANTHER PTHR30589:SF0 1 173 1.0E-71 T 22-04-2016 AMK43_RS02395 ebb52411c3e20a58b745bcd103eaca4c 261 PANTHER PTHR24220:SF73 6 251 1.1E-93 T 22-04-2016 AMK43_RS02395 ebb52411c3e20a58b745bcd103eaca4c 261 Gene3D G3DSA:3.40.50.300 2 240 2.2E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02395 ebb52411c3e20a58b745bcd103eaca4c 261 PANTHER PTHR24220 6 251 1.1E-93 T 22-04-2016 AMK43_RS02395 ebb52411c3e20a58b745bcd103eaca4c 261 SMART SM00382 31 220 4.6E-15 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS02395 ebb52411c3e20a58b745bcd103eaca4c 261 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS02395 ebb52411c3e20a58b745bcd103eaca4c 261 SUPERFAMILY SSF52540 4 233 2.15E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02395 ebb52411c3e20a58b745bcd103eaca4c 261 Pfam PF00005 ABC transporter 22 172 2.7E-36 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS04520 573fa358adcf8dc6d38b23744603907b 296 PANTHER PTHR21666 14 294 2.3E-40 T 22-04-2016 AMK43_RS04520 573fa358adcf8dc6d38b23744603907b 296 Gene3D G3DSA:2.70.70.10 146 294 8.2E-47 T 22-04-2016 AMK43_RS04520 573fa358adcf8dc6d38b23744603907b 296 Pfam PF01551 Peptidase family M23 196 290 6.9E-30 T 22-04-2016 IPR016047 Peptidase M23 AMK43_RS04520 573fa358adcf8dc6d38b23744603907b 296 SUPERFAMILY SSF51261 61 293 4.34E-50 T 22-04-2016 IPR011055 Duplicated hybrid motif AMK43_RS08345 5a7111cd5b06fc6e806c1a3f845d4bd0 743 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 3 741 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 AMK43_RS08345 5a7111cd5b06fc6e806c1a3f845d4bd0 743 PANTHER PTHR30191 1 743 0.0 T 22-04-2016 AMK43_RS08345 5a7111cd5b06fc6e806c1a3f845d4bd0 743 ProSitePatterns PS00850 Glycine radical domain signature. 713 721 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AMK43_RS08345 5a7111cd5b06fc6e806c1a3f845d4bd0 743 Pfam PF02901 Pyruvate formate lyase-like 16 602 1.9E-199 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 AMK43_RS08345 5a7111cd5b06fc6e806c1a3f845d4bd0 743 PIRSF PIRSF000379 1 743 0.0 T 22-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 AMK43_RS08345 5a7111cd5b06fc6e806c1a3f845d4bd0 743 SUPERFAMILY SSF51998 1 741 4.58E-275 T 22-04-2016 AMK43_RS08345 5a7111cd5b06fc6e806c1a3f845d4bd0 743 Pfam PF01228 Glycine radical 618 724 9.9E-41 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AMK43_RS08345 5a7111cd5b06fc6e806c1a3f845d4bd0 743 PANTHER PTHR30191:SF0 1 743 0.0 T 22-04-2016 AMK43_RS08345 5a7111cd5b06fc6e806c1a3f845d4bd0 743 Gene3D G3DSA:3.20.70.20 2 739 4.1E-300 T 22-04-2016 AMK43_RS02155 7bc91f4e3c5940e84106c79cad997fe5 76 SUPERFAMILY SSF50037 6 74 1.19E-19 T 22-04-2016 IPR008988 Transcriptional repressor, C-terminal AMK43_RS02155 7bc91f4e3c5940e84106c79cad997fe5 76 Pfam PF04023 FeoA domain 1 72 2.3E-13 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AMK43_RS02155 7bc91f4e3c5940e84106c79cad997fe5 76 SMART SM00899 1 73 5.6E-20 T 22-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 AMK43_RS02155 7bc91f4e3c5940e84106c79cad997fe5 76 PANTHER PTHR33238 1 76 2.4E-18 T 22-04-2016 AMK43_RS01175 d823550e31b83c7440994f1c92894d4b 303 SUPERFAMILY SSF103481 44 142 2.22E-9 T 22-04-2016 AMK43_RS01175 d823550e31b83c7440994f1c92894d4b 303 SUPERFAMILY SSF103481 206 286 3.14E-11 T 22-04-2016 AMK43_RS01175 d823550e31b83c7440994f1c92894d4b 303 PANTHER PTHR12715 14 288 4.9E-43 T 22-04-2016 AMK43_RS01175 d823550e31b83c7440994f1c92894d4b 303 Pfam PF00892 EamA-like transporter family 14 140 1.2E-13 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK43_RS01175 d823550e31b83c7440994f1c92894d4b 303 Pfam PF00892 EamA-like transporter family 152 286 2.7E-19 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK43_RS07065 c1da05de5f4dfeec5f9b015e9b143bd1 224 TIGRFAM TIGR00017 cmk: cytidylate kinase 1 209 9.0E-75 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AMK43_RS07065 c1da05de5f4dfeec5f9b015e9b143bd1 224 PANTHER PTHR21299 1 224 1.0E-67 T 22-04-2016 AMK43_RS07065 c1da05de5f4dfeec5f9b015e9b143bd1 224 Hamap MF_00238 Cytidylate kinase [cmk]. 1 215 33.486 T 22-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AMK43_RS07065 c1da05de5f4dfeec5f9b015e9b143bd1 224 Gene3D G3DSA:3.40.50.300 1 211 3.3E-74 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07065 c1da05de5f4dfeec5f9b015e9b143bd1 224 SUPERFAMILY SSF52540 1 211 7.83E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07065 c1da05de5f4dfeec5f9b015e9b143bd1 224 Pfam PF02224 Cytidylate kinase 3 210 1.4E-76 T 22-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 SUPERFAMILY SSF50249 123 220 2.06E-15 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 SUPERFAMILY SSF50249 51 132 6.86E-13 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 PANTHER PTHR23355 32 712 1.3E-189 T 22-04-2016 AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 57 688 1.4E-166 T 22-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 ProSitePatterns PS01175 Ribonuclease II family signature. 536 560 - T 22-04-2016 IPR022966 Ribonuclease II/R, conserved site AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 SMART SM00357 70 130 1.6 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 SMART SM00357 137 197 0.06 T 22-04-2016 IPR011129 Cold shock protein GO:0003676 AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 Gene3D G3DSA:2.40.50.140 612 694 4.5E-5 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 TIGRFAM TIGR02063 RNase_R: ribonuclease R 16 694 3.2E-217 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 Pfam PF08206 Ribonuclease B OB domain 147 196 1.4E-8 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 Pfam PF08206 Ribonuclease B OB domain 79 129 8.1E-11 T 22-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 Hamap MF_01895 Ribonuclease R [rnr]. 23 697 52.233 T 22-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 Pfam PF00773 RNB domain 242 565 1.1E-107 T 22-04-2016 AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 SMART SM00955 242 569 1.8E-160 T 22-04-2016 AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 PANTHER PTHR23355:SF9 32 712 1.3E-189 T 22-04-2016 AMK43_RS10840 2472cdf2fd2cba5500130fd78ad1a2b9 714 SUPERFAMILY SSF50249 207 615 3.37E-129 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS01560 df907ed5514a770447898cae53b48ebc 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 234 5.4E-29 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 AMK43_RS01560 df907ed5514a770447898cae53b48ebc 271 Gene3D G3DSA:3.30.1240.10 85 179 3.7E-9 T 22-04-2016 AMK43_RS01560 df907ed5514a770447898cae53b48ebc 271 SUPERFAMILY SSF56784 1 269 4.0E-61 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS01560 df907ed5514a770447898cae53b48ebc 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 246 1.1E-48 T 22-04-2016 IPR000150 Cof protein GO:0016787 AMK43_RS01560 df907ed5514a770447898cae53b48ebc 271 PANTHER PTHR10000 1 270 8.2E-63 T 22-04-2016 AMK43_RS01560 df907ed5514a770447898cae53b48ebc 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 262 1.4E-58 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS01560 df907ed5514a770447898cae53b48ebc 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 215 237 - T 22-04-2016 AMK43_RS01560 df907ed5514a770447898cae53b48ebc 271 Gene3D G3DSA:3.40.50.1000 180 270 3.2E-49 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS01560 df907ed5514a770447898cae53b48ebc 271 Gene3D G3DSA:3.40.50.1000 1 72 3.2E-49 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS01560 df907ed5514a770447898cae53b48ebc 271 PANTHER PTHR10000:SF20 1 270 8.2E-63 T 22-04-2016 AMK43_RS01560 df907ed5514a770447898cae53b48ebc 271 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 AMK43_RS07725 9aa40b7544713be4b7954171499a6dc7 171 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS07725 9aa40b7544713be4b7954171499a6dc7 171 Gene3D G3DSA:2.70.70.10 17 166 8.7E-57 T 22-04-2016 AMK43_RS07725 9aa40b7544713be4b7954171499a6dc7 171 PANTHER PTHR30175 12 118 7.0E-41 T 22-04-2016 AMK43_RS07725 9aa40b7544713be4b7954171499a6dc7 171 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 21 146 4.1E-49 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS07725 9aa40b7544713be4b7954171499a6dc7 171 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 22 143 3.6E-45 T 22-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS07725 9aa40b7544713be4b7954171499a6dc7 171 SUPERFAMILY SSF51261 21 166 2.09E-51 T 22-04-2016 IPR011055 Duplicated hybrid motif AMK43_RS10095 83021321beb2d3f490f8c6bcd7ca3ded 218 SUPERFAMILY SSF116726 134 211 9.68E-16 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK43_RS10095 83021321beb2d3f490f8c6bcd7ca3ded 218 PANTHER PTHR16254 4 160 1.7E-43 T 22-04-2016 AMK43_RS10095 83021321beb2d3f490f8c6bcd7ca3ded 218 SUPERFAMILY SSF51735 4 136 1.65E-28 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS10095 83021321beb2d3f490f8c6bcd7ca3ded 218 Gene3D G3DSA:3.40.50.720 4 140 1.7E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS10095 83021321beb2d3f490f8c6bcd7ca3ded 218 Pfam PF02080 TrkA-C domain 152 209 4.7E-11 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK43_RS10095 83021321beb2d3f490f8c6bcd7ca3ded 218 Gene3D G3DSA:3.30.70.1450 146 210 2.7E-14 T 22-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 AMK43_RS10095 83021321beb2d3f490f8c6bcd7ca3ded 218 Pfam PF02254 TrkA-N domain 4 121 1.2E-23 T 22-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 AMK43_RS09820 38d3226761e2463e6ec80ef7ab5b478b 123 PANTHER PTHR33204 1 100 8.5E-46 T 22-04-2016 AMK43_RS09820 38d3226761e2463e6ec80ef7ab5b478b 123 Gene3D G3DSA:1.10.10.10 5 103 2.3E-36 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09820 38d3226761e2463e6ec80ef7ab5b478b 123 PANTHER PTHR33204:SF2 1 100 8.5E-46 T 22-04-2016 AMK43_RS09820 38d3226761e2463e6ec80ef7ab5b478b 123 Pfam PF01638 HxlR-like helix-turn-helix 15 101 4.0E-32 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type AMK43_RS09820 38d3226761e2463e6ec80ef7ab5b478b 123 SUPERFAMILY SSF46785 8 100 4.91E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS07285 1a289c13a330b7d9096ad99558ccf48f 164 Gene3D G3DSA:3.40.630.30 53 162 1.9E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS07285 1a289c13a330b7d9096ad99558ccf48f 164 Pfam PF00583 Acetyltransferase (GNAT) family 85 159 1.6E-14 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS07285 1a289c13a330b7d9096ad99558ccf48f 164 PANTHER PTHR23091 82 160 4.9E-15 T 22-04-2016 AMK43_RS07285 1a289c13a330b7d9096ad99558ccf48f 164 SUPERFAMILY SSF55729 39 160 8.61E-20 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS09510 64c5de9bc49a6e3c33b6fdbf1dbc98c0 457 PANTHER PTHR32328 1 457 2.5E-193 T 22-04-2016 AMK43_RS09510 64c5de9bc49a6e3c33b6fdbf1dbc98c0 457 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 6 455 5.4E-181 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 AMK43_RS09510 64c5de9bc49a6e3c33b6fdbf1dbc98c0 457 SUPERFAMILY SSF53383 71 457 9.98E-52 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS09510 64c5de9bc49a6e3c33b6fdbf1dbc98c0 457 PANTHER PTHR32328:SF0 1 457 2.5E-193 T 22-04-2016 AMK43_RS09510 64c5de9bc49a6e3c33b6fdbf1dbc98c0 457 Gene3D G3DSA:3.40.640.10 78 318 1.5E-30 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS09510 64c5de9bc49a6e3c33b6fdbf1dbc98c0 457 Pfam PF03841 L-seryl-tRNA selenium transferase 80 442 1.1E-155 T 22-04-2016 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 AMK43_RS09510 64c5de9bc49a6e3c33b6fdbf1dbc98c0 457 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 457 199.482 T 22-04-2016 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1|UniPathway: UPA00906 AMK43_RS04320 92f95c58971feb35754e3e248be1ccb8 276 Pfam PF03180 NLPA lipoprotein 41 268 2.4E-64 T 22-04-2016 IPR004872 Lipoprotein NlpA family AMK43_RS04320 92f95c58971feb35754e3e248be1ccb8 276 SUPERFAMILY SSF53850 41 271 4.79E-62 T 22-04-2016 AMK43_RS04320 92f95c58971feb35754e3e248be1ccb8 276 PANTHER PTHR30429 1 276 3.3E-76 T 22-04-2016 IPR004872 Lipoprotein NlpA family AMK43_RS04320 92f95c58971feb35754e3e248be1ccb8 276 Gene3D G3DSA:3.40.190.10 35 166 3.0E-41 T 22-04-2016 AMK43_RS00730 12e31d6b2ec7cac03ff1f8474d89af02 512 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 505 3.9E-167 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 AMK43_RS00730 12e31d6b2ec7cac03ff1f8474d89af02 512 SUPERFAMILY SSF52540 6 236 1.63E-51 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00730 12e31d6b2ec7cac03ff1f8474d89af02 512 Gene3D G3DSA:3.40.50.300 5 243 1.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00730 12e31d6b2ec7cac03ff1f8474d89af02 512 PANTHER PTHR21343:SF1 1 509 1.3E-205 T 22-04-2016 AMK43_RS00730 12e31d6b2ec7cac03ff1f8474d89af02 512 Gene3D G3DSA:3.40.50.880 252 468 1.7E-30 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS00730 12e31d6b2ec7cac03ff1f8474d89af02 512 SUPERFAMILY SSF52317 194 410 1.07E-33 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS00730 12e31d6b2ec7cac03ff1f8474d89af02 512 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 236 2.1E-31 T 22-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain AMK43_RS00730 12e31d6b2ec7cac03ff1f8474d89af02 512 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 254 457 8.5E-56 T 22-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 AMK43_RS00730 12e31d6b2ec7cac03ff1f8474d89af02 512 PANTHER PTHR21343 1 509 1.3E-205 T 22-04-2016 AMK43_RS00730 12e31d6b2ec7cac03ff1f8474d89af02 512 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 512 162.798 T 22-04-2016 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 UniPathway: UPA00148 AMK43_RS11150 9fe945b1e2e2c6f63f1e0822d3bcd5bd 257 Pfam PF01061 ABC-2 type transporter 14 218 1.0E-21 T 22-04-2016 IPR013525 ABC-2 type transporter GO:0016020 AMK43_RS11150 9fe945b1e2e2c6f63f1e0822d3bcd5bd 257 PANTHER PTHR30413 1 257 3.3E-74 T 22-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 AMK43_RS11150 9fe945b1e2e2c6f63f1e0822d3bcd5bd 257 PANTHER PTHR30413:SF8 1 257 3.3E-74 T 22-04-2016 AMK43_RS06230 08d9599e9f1f932a517cafe88cc7eb05 285 Gene3D G3DSA:3.30.1700.10 135 281 1.2E-52 T 22-04-2016 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK43_RS06230 08d9599e9f1f932a517cafe88cc7eb05 285 SUPERFAMILY SSF54211 1 128 7.59E-29 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS06230 08d9599e9f1f932a517cafe88cc7eb05 285 PANTHER PTHR33694 1 283 3.1E-93 T 22-04-2016 AMK43_RS06230 08d9599e9f1f932a517cafe88cc7eb05 285 Gene3D G3DSA:3.30.230.20 2 129 4.2E-35 T 22-04-2016 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK43_RS06230 08d9599e9f1f932a517cafe88cc7eb05 285 SUPERFAMILY SSF54211 143 281 1.44E-46 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS06230 08d9599e9f1f932a517cafe88cc7eb05 285 PANTHER PTHR33694:SF1 1 283 3.1E-93 T 22-04-2016 AMK43_RS06230 08d9599e9f1f932a517cafe88cc7eb05 285 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1 283 1.1E-82 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK43_RS06230 08d9599e9f1f932a517cafe88cc7eb05 285 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 279 4.6E-94 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK43_RS06230 08d9599e9f1f932a517cafe88cc7eb05 285 Hamap MF_00388 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [lpxC]. 1 285 37.309 T 22-04-2016 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|UniPathway: UPA00359 AMK43_RS07465 8ae29ce23e1c2522f9a54bae15bdf6e6 129 Pfam PF09403 Adhesion protein FadA 1 124 4.0E-26 T 22-04-2016 IPR018543 Adhesion protein FadA AMK43_RS00625 4d10615cfe984e10fecd1a8e827ba9ab 109 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 7 100 1.9E-24 T 22-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like AMK43_RS00625 4d10615cfe984e10fecd1a8e827ba9ab 109 Gene3D G3DSA:1.10.10.10 2 98 1.2E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS00625 4d10615cfe984e10fecd1a8e827ba9ab 109 PANTHER PTHR40083 3 102 3.0E-27 T 22-04-2016 AMK43_RS00625 4d10615cfe984e10fecd1a8e827ba9ab 109 SUPERFAMILY SSF88659 5 93 8.72E-23 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS00625 4d10615cfe984e10fecd1a8e827ba9ab 109 Hamap MF_00245 UPF0122 protein . 4 100 18.702 T 22-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like AMK43_RS07295 879fd4bd5ee961dfbbf5e9882aa4635d 353 Pfam PF02608 Basic membrane protein 50 336 5.0E-65 T 22-04-2016 IPR003760 Basic membrane lipoprotein GO:0005886 AMK43_RS07295 879fd4bd5ee961dfbbf5e9882aa4635d 353 Gene3D G3DSA:3.40.50.2300 154 314 1.4E-59 T 22-04-2016 AMK43_RS07295 879fd4bd5ee961dfbbf5e9882aa4635d 353 SUPERFAMILY SSF53822 47 296 3.4E-18 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK43_RS07295 879fd4bd5ee961dfbbf5e9882aa4635d 353 PANTHER PTHR34296 1 345 2.1E-117 T 22-04-2016 AMK43_RS07295 879fd4bd5ee961dfbbf5e9882aa4635d 353 PANTHER PTHR34296:SF2 1 345 2.1E-117 T 22-04-2016 AMK43_RS07385 680ea1450bdf600ec7d4ca7351813790 546 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 24 299 9.8E-14 T 22-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 AMK43_RS07385 680ea1450bdf600ec7d4ca7351813790 546 SUPERFAMILY SSF52540 1 122 1.39E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07385 680ea1450bdf600ec7d4ca7351813790 546 SUPERFAMILY SSF52540 163 303 1.39E-17 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07385 680ea1450bdf600ec7d4ca7351813790 546 Gene3D G3DSA:3.40.50.300 1 107 2.8E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07385 680ea1450bdf600ec7d4ca7351813790 546 Gene3D G3DSA:3.40.50.300 162 310 2.8E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00345 7bcf404e2a2edd9dbd9e4e64f5f34547 298 PANTHER PTHR22911 17 290 6.0E-50 T 22-04-2016 AMK43_RS00345 7bcf404e2a2edd9dbd9e4e64f5f34547 298 SUPERFAMILY SSF103481 193 290 4.32E-13 T 22-04-2016 AMK43_RS00345 7bcf404e2a2edd9dbd9e4e64f5f34547 298 SUPERFAMILY SSF103481 46 144 4.05E-16 T 22-04-2016 AMK43_RS00345 7bcf404e2a2edd9dbd9e4e64f5f34547 298 Pfam PF00892 EamA-like transporter family 17 144 4.5E-14 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK43_RS00345 7bcf404e2a2edd9dbd9e4e64f5f34547 298 Pfam PF00892 EamA-like transporter family 158 290 6.7E-23 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK43_RS04495 73fcbef695c613cd2525f4146e1cda3d 768 Pfam PF13672 Protein phosphatase 2C 18 139 6.5E-9 T 22-04-2016 AMK43_RS04495 73fcbef695c613cd2525f4146e1cda3d 768 SMART SM00332 1 244 5.5E-4 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK43_RS04495 73fcbef695c613cd2525f4146e1cda3d 768 SUPERFAMILY SSF81606 8 244 2.88E-29 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK43_RS04495 73fcbef695c613cd2525f4146e1cda3d 768 Gene3D G3DSA:1.10.150.160 364 405 2.8E-4 T 22-04-2016 IPR023114 Elongated TPR repeat-containing domain AMK43_RS04495 73fcbef695c613cd2525f4146e1cda3d 768 Gene3D G3DSA:3.60.40.10 6 244 4.3E-32 T 22-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 AMK43_RS02735 4108894bc0034b2529f2089257490eb9 320 Pfam PF05448 Acetyl xylan esterase (AXE1) 5 315 1.6E-111 T 22-04-2016 IPR008391 Acetyl xylan esterase AMK43_RS02735 4108894bc0034b2529f2089257490eb9 320 Gene3D G3DSA:3.40.50.1820 4 313 1.1E-68 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS02735 4108894bc0034b2529f2089257490eb9 320 SUPERFAMILY SSF53474 14 309 1.69E-27 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS02735 4108894bc0034b2529f2089257490eb9 320 PANTHER PTHR40111:SF1 1 320 2.8E-59 T 22-04-2016 AMK43_RS02735 4108894bc0034b2529f2089257490eb9 320 PANTHER PTHR40111 1 320 2.8E-59 T 22-04-2016 AMK43_RS00050 4f50b7302f759208193e6542585d9f27 254 Gene3D G3DSA:3.40.50.620 189 254 2.5E-5 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS00050 4f50b7302f759208193e6542585d9f27 254 Gene3D G3DSA:3.40.50.620 4 84 2.5E-5 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS00050 4f50b7302f759208193e6542585d9f27 254 SUPERFAMILY SSF52402 189 254 1.38E-8 T 22-04-2016 AMK43_RS00050 4f50b7302f759208193e6542585d9f27 254 SUPERFAMILY SSF52402 3 84 1.38E-8 T 22-04-2016 AMK43_RS07885 13b0de68e339cd6ccd87a7926b89a11c 301 SMART SM00363 15 75 2.2E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS07885 13b0de68e339cd6ccd87a7926b89a11c 301 SUPERFAMILY SSF55174 14 65 1.57E-7 T 22-04-2016 AMK43_RS07885 13b0de68e339cd6ccd87a7926b89a11c 301 PANTHER PTHR11079:SF84 94 291 2.1E-49 T 22-04-2016 AMK43_RS07885 13b0de68e339cd6ccd87a7926b89a11c 301 PANTHER PTHR11079:SF84 8 77 2.1E-49 T 22-04-2016 AMK43_RS07885 13b0de68e339cd6ccd87a7926b89a11c 301 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 139 153 - T 22-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS07885 13b0de68e339cd6ccd87a7926b89a11c 301 PANTHER PTHR11079 94 291 2.1E-49 T 22-04-2016 AMK43_RS07885 13b0de68e339cd6ccd87a7926b89a11c 301 PANTHER PTHR11079 8 77 2.1E-49 T 22-04-2016 AMK43_RS07885 13b0de68e339cd6ccd87a7926b89a11c 301 Pfam PF01479 S4 domain 15 61 1.7E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS07885 13b0de68e339cd6ccd87a7926b89a11c 301 Gene3D G3DSA:3.10.290.10 14 63 1.9E-7 T 22-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 AMK43_RS07885 13b0de68e339cd6ccd87a7926b89a11c 301 SUPERFAMILY SSF55120 91 286 1.92E-40 T 22-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS07885 13b0de68e339cd6ccd87a7926b89a11c 301 Pfam PF00849 RNA pseudouridylate synthase 101 253 7.9E-27 T 22-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 AMK43_RS01265 698877cd8a7b26cac961f99005392d96 72 PANTHER PTHR33370 1 72 2.2E-47 T 22-04-2016 AMK43_RS01265 698877cd8a7b26cac961f99005392d96 72 SUPERFAMILY SSF50249 1 70 6.61E-27 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS01265 698877cd8a7b26cac961f99005392d96 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 3.7E-38 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMK43_RS01265 698877cd8a7b26cac961f99005392d96 72 SMART SM00316 4 72 9.5E-6 T 22-04-2016 IPR022967 RNA-binding domain, S1 AMK43_RS01265 698877cd8a7b26cac961f99005392d96 72 Gene3D G3DSA:2.40.50.140 1 72 1.6E-37 T 22-04-2016 IPR012340 Nucleic acid-binding, OB-fold AMK43_RS01265 698877cd8a7b26cac961f99005392d96 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 3.7E-27 T 22-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 AMK43_RS01265 698877cd8a7b26cac961f99005392d96 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.316 T 22-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 AMK43_RS07580 2cf50b1a40ea7ca37f222e96d7ef3d16 144 Gene3D G3DSA:3.40.1510.10 7 125 8.4E-23 T 22-04-2016 IPR015111 Hut operon regulatory protein HutP AMK43_RS07580 2cf50b1a40ea7ca37f222e96d7ef3d16 144 Pfam PF09021 HutP 11 136 1.3E-39 T 22-04-2016 IPR015111 Hut operon regulatory protein HutP AMK43_RS07580 2cf50b1a40ea7ca37f222e96d7ef3d16 144 SUPERFAMILY SSF111064 11 122 2.35E-8 T 22-04-2016 IPR015111 Hut operon regulatory protein HutP AMK43_RS10210 c7f2e36e8fef402fa181d08884bb1016 262 Pfam PF00756 Putative esterase 28 248 4.2E-38 T 22-04-2016 IPR000801 Putative esterase AMK43_RS10210 c7f2e36e8fef402fa181d08884bb1016 262 SUPERFAMILY SSF53474 20 259 6.4E-46 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS10210 c7f2e36e8fef402fa181d08884bb1016 262 PANTHER PTHR10907:SF33 23 188 3.2E-26 T 22-04-2016 AMK43_RS10210 c7f2e36e8fef402fa181d08884bb1016 262 Gene3D G3DSA:3.40.50.1820 1 257 1.0E-65 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS10210 c7f2e36e8fef402fa181d08884bb1016 262 PANTHER PTHR10907 23 188 3.2E-26 T 22-04-2016 AMK43_RS09020 835af50edd5ff8f6cc194911b5ca887a 279 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 228 4.4E-19 T 22-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 AMK43_RS09020 835af50edd5ff8f6cc194911b5ca887a 279 SUPERFAMILY SSF100950 2 263 6.05E-102 T 22-04-2016 AMK43_RS09020 835af50edd5ff8f6cc194911b5ca887a 279 PANTHER PTHR11280 2 278 1.6E-167 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 AMK43_RS09020 835af50edd5ff8f6cc194911b5ca887a 279 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.303 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 AMK43_RS09020 835af50edd5ff8f6cc194911b5ca887a 279 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 22-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 AMK43_RS09020 835af50edd5ff8f6cc194911b5ca887a 279 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 2 259 1.4E-121 T 22-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 AMK43_RS09020 835af50edd5ff8f6cc194911b5ca887a 279 Gene3D G3DSA:3.40.50.1360 2 263 1.9E-108 T 22-04-2016 AMK43_RS07340 c3a1268cc5511fe1e1b3868c4c824d0b 161 SMART SM00287 93 161 0.0069 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type AMK43_RS07340 c3a1268cc5511fe1e1b3868c4c824d0b 161 SMART SM00287 25 92 1.4 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type AMK43_RS07340 c3a1268cc5511fe1e1b3868c4c824d0b 161 Pfam PF08239 Bacterial SH3 domain 102 156 9.2E-7 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type AMK43_RS07340 c3a1268cc5511fe1e1b3868c4c824d0b 161 Pfam PF08239 Bacterial SH3 domain 34 87 8.1E-8 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type AMK43_RS09715 370b1337f132c127f8427a39afabbd77 403 PANTHER PTHR34289 3 402 1.5E-108 T 22-04-2016 AMK43_RS09715 370b1337f132c127f8427a39afabbd77 403 Pfam PF05684 Protein of unknown function (DUF819) 16 402 4.5E-97 T 22-04-2016 IPR008537 Protein of unknown function DUF819 AMK43_RS09715 370b1337f132c127f8427a39afabbd77 403 PANTHER PTHR34289:SF3 3 402 1.5E-108 T 22-04-2016 AMK43_RS04060 cd367854adff25061d5b72f3fa8787c8 297 PANTHER PTHR30477:SF0 15 297 2.8E-79 T 22-04-2016 AMK43_RS04060 cd367854adff25061d5b72f3fa8787c8 297 PANTHER PTHR30477 15 297 2.8E-79 T 22-04-2016 AMK43_RS04060 cd367854adff25061d5b72f3fa8787c8 297 SUPERFAMILY SSF81345 18 282 2.62E-30 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK43_RS04060 cd367854adff25061d5b72f3fa8787c8 297 Pfam PF00950 ABC 3 transport family 24 286 2.1E-50 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 AMK43_RS04060 cd367854adff25061d5b72f3fa8787c8 297 Gene3D G3DSA:1.10.3470.10 66 289 3.6E-7 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK43_RS09835 5f58e2ea03239ba9b1f63a353742d2ea 309 SUPERFAMILY SSF46689 8 111 5.55E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS09835 5f58e2ea03239ba9b1f63a353742d2ea 309 Gene3D G3DSA:3.30.420.10 157 303 4.0E-14 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS09835 5f58e2ea03239ba9b1f63a353742d2ea 309 Pfam PF00665 Integrase core domain 156 262 1.1E-15 T 22-04-2016 IPR001584 Integrase, catalytic core GO:0015074 AMK43_RS09835 5f58e2ea03239ba9b1f63a353742d2ea 309 Pfam PF13936 Helix-turn-helix domain 3 44 1.1E-13 T 22-04-2016 IPR025246 Transposase IS30-like HTH domain AMK43_RS09835 5f58e2ea03239ba9b1f63a353742d2ea 309 ProSitePatterns PS01043 Transposases, IS30 family, signature. 251 267 - T 22-04-2016 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 AMK43_RS09835 5f58e2ea03239ba9b1f63a353742d2ea 309 Gene3D G3DSA:1.10.10.10 8 46 1.0E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09835 5f58e2ea03239ba9b1f63a353742d2ea 309 SUPERFAMILY SSF53098 157 303 4.55E-25 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS09835 5f58e2ea03239ba9b1f63a353742d2ea 309 PANTHER PTHR10948 1 307 7.1E-67 T 22-04-2016 AMK43_RS04390 dc0f7fb74312f71502885bdf1495f164 397 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 393 51.458 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK43_RS04390 dc0f7fb74312f71502885bdf1495f164 397 PANTHER PTHR37480 2 390 2.4E-174 T 22-04-2016 AMK43_RS04390 dc0f7fb74312f71502885bdf1495f164 397 Pfam PF07055 Enoyl reductase FAD binding domain 324 387 8.8E-29 T 22-04-2016 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK43_RS04390 dc0f7fb74312f71502885bdf1495f164 397 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 77 2.4E-31 T 22-04-2016 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK43_RS04390 dc0f7fb74312f71502885bdf1495f164 397 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 81 318 1.5E-101 T 22-04-2016 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 AMK43_RS08110 330b565d22dd9bb56de24c4cb52d1797 405 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 301 7.7E-87 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK43_RS08110 330b565d22dd9bb56de24c4cb52d1797 405 Gene3D G3DSA:3.40.50.1100 69 319 6.2E-82 T 22-04-2016 AMK43_RS08110 330b565d22dd9bb56de24c4cb52d1797 405 PANTHER PTHR10314:SF17 6 353 1.9E-155 T 22-04-2016 AMK43_RS08110 330b565d22dd9bb56de24c4cb52d1797 405 Pfam PF01842 ACT domain 326 390 2.0E-6 T 22-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 AMK43_RS08110 330b565d22dd9bb56de24c4cb52d1797 405 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 21 396 3.4E-146 T 22-04-2016 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00052 AMK43_RS08110 330b565d22dd9bb56de24c4cb52d1797 405 Gene3D G3DSA:3.30.70.260 324 389 2.9E-7 T 22-04-2016 AMK43_RS08110 330b565d22dd9bb56de24c4cb52d1797 405 SUPERFAMILY SSF53686 4 350 1.17E-102 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK43_RS08110 330b565d22dd9bb56de24c4cb52d1797 405 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 22-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 AMK43_RS08110 330b565d22dd9bb56de24c4cb52d1797 405 PANTHER PTHR10314 6 353 1.9E-155 T 22-04-2016 AMK43_RS09920 0b3fa0859fb281fa44b72c6be2833478 124 Pfam PF03413 Peptidase propeptide and YPEB domain 55 115 1.2E-13 T 22-04-2016 IPR025711 PepSY domain AMK43_RS07055 9948c1d96988a149eb83b06d2de9b6b0 425 PANTHER PTHR23417:SF2 1 111 7.8E-46 T 22-04-2016 AMK43_RS07055 9948c1d96988a149eb83b06d2de9b6b0 425 PANTHER PTHR23417:SF2 130 139 7.8E-46 T 22-04-2016 AMK43_RS07055 9948c1d96988a149eb83b06d2de9b6b0 425 PANTHER PTHR23417:SF2 189 275 7.8E-46 T 22-04-2016 AMK43_RS07055 9948c1d96988a149eb83b06d2de9b6b0 425 PANTHER PTHR23417:SF2 304 401 7.8E-46 T 22-04-2016 AMK43_RS07055 9948c1d96988a149eb83b06d2de9b6b0 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 37 209 1.4E-41 T 22-04-2016 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675|UniPathway: UPA00958 AMK43_RS07055 9948c1d96988a149eb83b06d2de9b6b0 425 PANTHER PTHR23417 1 111 7.8E-46 T 22-04-2016 AMK43_RS07055 9948c1d96988a149eb83b06d2de9b6b0 425 PANTHER PTHR23417 130 139 7.8E-46 T 22-04-2016 AMK43_RS07055 9948c1d96988a149eb83b06d2de9b6b0 425 PANTHER PTHR23417 189 275 7.8E-46 T 22-04-2016 AMK43_RS07055 9948c1d96988a149eb83b06d2de9b6b0 425 PANTHER PTHR23417 304 401 7.8E-46 T 22-04-2016 AMK43_RS01750 ebeb72fe953b38bbadc6f4371463ff7b 289 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 6 282 7.4E-154 T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 AMK43_RS01750 ebeb72fe953b38bbadc6f4371463ff7b 289 Gene3D G3DSA:3.20.20.70 21 157 1.3E-51 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS01750 ebeb72fe953b38bbadc6f4371463ff7b 289 Gene3D G3DSA:3.20.20.70 189 277 1.3E-51 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS01750 ebeb72fe953b38bbadc6f4371463ff7b 289 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 1 289 49.879 T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 AMK43_RS01750 ebeb72fe953b38bbadc6f4371463ff7b 289 Pfam PF01680 SOR/SNZ family 5 209 5.5E-108 T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 AMK43_RS01750 ebeb72fe953b38bbadc6f4371463ff7b 289 PIRSF PIRSF029271 1 289 2.2E-146 T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 AMK43_RS01750 ebeb72fe953b38bbadc6f4371463ff7b 289 ProSitePatterns PS01235 PdxS/SNZ family signature. 202 220 - T 22-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 AMK43_RS01750 ebeb72fe953b38bbadc6f4371463ff7b 289 PANTHER PTHR31829 4 289 2.0E-216 T 22-04-2016 AMK43_RS01750 ebeb72fe953b38bbadc6f4371463ff7b 289 SUPERFAMILY SSF51366 15 265 2.73E-64 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK43_RS09040 3182bede0460cf2b401b904ab806db8d 273 PANTHER PTHR30514 1 257 1.3E-67 T 22-04-2016 AMK43_RS09040 3182bede0460cf2b401b904ab806db8d 273 SUPERFAMILY SSF53697 82 263 7.2E-40 T 22-04-2016 AMK43_RS09040 3182bede0460cf2b401b904ab806db8d 273 SUPERFAMILY SSF46689 1 73 4.12E-20 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS09040 3182bede0460cf2b401b904ab806db8d 273 Gene3D G3DSA:1.10.10.10 1 62 1.7E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09040 3182bede0460cf2b401b904ab806db8d 273 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 73 3.9E-21 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AMK43_RS09040 3182bede0460cf2b401b904ab806db8d 273 PANTHER PTHR30514:SF1 1 257 1.3E-67 T 22-04-2016 AMK43_RS09040 3182bede0460cf2b401b904ab806db8d 273 Pfam PF01380 SIS domain 116 243 8.2E-22 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK43_RS09040 3182bede0460cf2b401b904ab806db8d 273 Gene3D G3DSA:3.40.50.10490 63 263 1.2E-38 T 22-04-2016 AMK43_RS11080 0b9ef855ac426d5fbf3058cbf261eef0 285 PANTHER PTHR10491 2 282 5.7E-81 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family AMK43_RS11080 0b9ef855ac426d5fbf3058cbf261eef0 285 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 3 279 1.8E-80 T 22-04-2016 IPR005913 dTDP-4-dehydrorhamnose reductase family AMK43_RS11080 0b9ef855ac426d5fbf3058cbf261eef0 285 Gene3D G3DSA:3.40.50.720 2 223 5.7E-46 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS11080 0b9ef855ac426d5fbf3058cbf261eef0 285 Pfam PF04321 RmlD substrate binding domain 2 280 6.5E-80 T 22-04-2016 IPR029903 RmlD-like substrate binding domain AMK43_RS11080 0b9ef855ac426d5fbf3058cbf261eef0 285 PANTHER PTHR10491:SF4 2 282 5.7E-81 T 22-04-2016 AMK43_RS11080 0b9ef855ac426d5fbf3058cbf261eef0 285 SUPERFAMILY SSF51735 2 279 1.44E-76 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS06015 f6dc69433450be1e39b8b0b142edda48 567 SUPERFAMILY SSF53850 85 559 1.16E-78 T 22-04-2016 AMK43_RS06015 f6dc69433450be1e39b8b0b142edda48 567 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 112 485 3.3E-44 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK43_RS06015 f6dc69433450be1e39b8b0b142edda48 567 Gene3D G3DSA:3.90.76.10 91 244 6.7E-38 T 22-04-2016 AMK43_RS06015 f6dc69433450be1e39b8b0b142edda48 567 Gene3D G3DSA:3.40.190.10 245 341 4.1E-12 T 22-04-2016 AMK43_RS06015 f6dc69433450be1e39b8b0b142edda48 567 PANTHER PTHR30290 1 559 2.5E-80 T 22-04-2016 AMK43_RS06015 f6dc69433450be1e39b8b0b142edda48 567 Gene3D G3DSA:3.10.105.10 342 531 1.0E-23 T 22-04-2016 AMK43_RS06015 f6dc69433450be1e39b8b0b142edda48 567 PANTHER PTHR30290:SF10 1 559 2.5E-80 T 22-04-2016 AMK43_RS06285 090cbf15f37a92951bcbf2ea62fea40b 280 SUPERFAMILY SSF140931 64 241 5.1E-40 T 22-04-2016 IPR003812 Fido domain AMK43_RS06285 090cbf15f37a92951bcbf2ea62fea40b 280 PANTHER PTHR13504 1 254 1.1E-45 T 22-04-2016 AMK43_RS06285 090cbf15f37a92951bcbf2ea62fea40b 280 Gene3D G3DSA:1.10.3290.10 6 239 1.2E-60 T 22-04-2016 IPR003812 Fido domain AMK43_RS06285 090cbf15f37a92951bcbf2ea62fea40b 280 Pfam PF02661 Fic/DOC family 89 183 8.3E-19 T 22-04-2016 IPR003812 Fido domain AMK43_RS10665 ab4005722f818cce2447a8cb0f1f9f74 186 Pfam PF06821 Serine hydrolase 6 182 1.6E-29 T 22-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- AMK43_RS10665 ab4005722f818cce2447a8cb0f1f9f74 186 SUPERFAMILY SSF53474 3 177 8.38E-34 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS10665 ab4005722f818cce2447a8cb0f1f9f74 186 PANTHER PTHR15394 1 185 2.7E-44 T 22-04-2016 AMK43_RS10665 ab4005722f818cce2447a8cb0f1f9f74 186 Gene3D G3DSA:3.40.50.1820 2 183 5.7E-59 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS10665 ab4005722f818cce2447a8cb0f1f9f74 186 PANTHER PTHR15394:SF2 1 185 2.7E-44 T 22-04-2016 AMK43_RS06595 a4ebb50aae3d6676333c2e221e76dbb5 540 SUPERFAMILY SSF52540 296 516 6.8E-39 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06595 a4ebb50aae3d6676333c2e221e76dbb5 540 Pfam PF00005 ABC transporter 336 467 4.1E-15 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS06595 a4ebb50aae3d6676333c2e221e76dbb5 540 Pfam PF00005 ABC transporter 18 184 1.7E-22 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS06595 a4ebb50aae3d6676333c2e221e76dbb5 540 Gene3D G3DSA:3.40.50.300 2 272 4.6E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06595 a4ebb50aae3d6676333c2e221e76dbb5 540 Gene3D G3DSA:3.40.50.300 318 533 1.5E-37 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06595 a4ebb50aae3d6676333c2e221e76dbb5 540 PANTHER PTHR19211:SF38 1 538 0.0 T 22-04-2016 AMK43_RS06595 a4ebb50aae3d6676333c2e221e76dbb5 540 PANTHER PTHR19211 1 538 0.0 T 22-04-2016 AMK43_RS06595 a4ebb50aae3d6676333c2e221e76dbb5 540 Pfam PF12848 ABC transporter 225 310 4.3E-18 T 22-04-2016 IPR032781 ABC-transporter extension domain AMK43_RS06595 a4ebb50aae3d6676333c2e221e76dbb5 540 SUPERFAMILY SSF52540 6 238 1.51E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06595 a4ebb50aae3d6676333c2e221e76dbb5 540 SMART SM00382 26 239 1.8E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS06595 a4ebb50aae3d6676333c2e221e76dbb5 540 SMART SM00382 345 513 0.0035 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS07255 7fdfb4cb7bdc0df09c8cc299a93f4837 86 SUPERFAMILY SSF46785 13 84 3.3E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS07255 7fdfb4cb7bdc0df09c8cc299a93f4837 86 Gene3D G3DSA:1.10.10.10 21 83 3.4E-6 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS07255 7fdfb4cb7bdc0df09c8cc299a93f4837 86 Pfam PF13412 Winged helix-turn-helix DNA-binding 28 72 7.3E-7 T 22-04-2016 AMK43_RS04310 a4902b1f9d2e18ce8641a13382c776d6 120 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 95 113 - T 22-04-2016 IPR019897 RidA, conserved site AMK43_RS04310 a4902b1f9d2e18ce8641a13382c776d6 120 Pfam PF01042 Endoribonuclease L-PSP 3 119 1.1E-35 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family AMK43_RS04310 a4902b1f9d2e18ce8641a13382c776d6 120 PANTHER PTHR11803 3 119 1.3E-42 T 22-04-2016 IPR006175 YjgF/YER057c/UK114 family AMK43_RS04310 a4902b1f9d2e18ce8641a13382c776d6 120 SUPERFAMILY SSF55298 3 119 5.34E-39 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK43_RS04310 a4902b1f9d2e18ce8641a13382c776d6 120 Gene3D G3DSA:3.30.1330.40 2 120 2.7E-43 T 22-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like AMK43_RS04310 a4902b1f9d2e18ce8641a13382c776d6 120 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 118 4.4E-42 T 22-04-2016 IPR006056 RidA family AMK43_RS05270 faf526abc0dcd2c0e053a82968f0c27c 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 237 7.6E-27 T 22-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 AMK43_RS05270 faf526abc0dcd2c0e053a82968f0c27c 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 264 4.4E-70 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS05270 faf526abc0dcd2c0e053a82968f0c27c 271 PANTHER PTHR10000 1 270 2.0E-86 T 22-04-2016 AMK43_RS05270 faf526abc0dcd2c0e053a82968f0c27c 271 Gene3D G3DSA:3.40.50.1000 1 75 4.1E-56 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS05270 faf526abc0dcd2c0e053a82968f0c27c 271 Gene3D G3DSA:3.40.50.1000 183 269 4.1E-56 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS05270 faf526abc0dcd2c0e053a82968f0c27c 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 264 1.2E-63 T 22-04-2016 IPR000150 Cof protein GO:0016787 AMK43_RS05270 faf526abc0dcd2c0e053a82968f0c27c 271 PANTHER PTHR10000:SF16 1 270 2.0E-86 T 22-04-2016 AMK43_RS05270 faf526abc0dcd2c0e053a82968f0c27c 271 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 22-04-2016 IPR000150 Cof protein GO:0016787 AMK43_RS05270 faf526abc0dcd2c0e053a82968f0c27c 271 Gene3D G3DSA:3.30.1240.10 87 182 2.9E-18 T 22-04-2016 AMK43_RS05270 faf526abc0dcd2c0e053a82968f0c27c 271 SUPERFAMILY SSF56784 1 269 2.43E-72 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS05270 faf526abc0dcd2c0e053a82968f0c27c 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 22-04-2016 AMK43_RS08015 361cc0d556d63c3a6c13fae24dc1a4b3 280 PANTHER PTHR36436 1 280 4.9E-44 T 22-04-2016 AMK43_RS08015 361cc0d556d63c3a6c13fae24dc1a4b3 280 PANTHER PTHR36436:SF1 1 280 4.9E-44 T 22-04-2016 AMK43_RS08015 361cc0d556d63c3a6c13fae24dc1a4b3 280 Gene3D G3DSA:2.30.320.10 10 280 8.6E-68 T 22-04-2016 IPR015315 Protein of unknown function DUF1963 AMK43_RS08015 361cc0d556d63c3a6c13fae24dc1a4b3 280 SUPERFAMILY SSF103032 13 279 6.28E-50 T 22-04-2016 IPR015315 Protein of unknown function DUF1963 AMK43_RS08015 361cc0d556d63c3a6c13fae24dc1a4b3 280 Pfam PF09234 Domain of unknown function (DUF1963) 46 279 3.3E-52 T 22-04-2016 IPR015315 Protein of unknown function DUF1963 AMK43_RS10775 3d2c79da293cf86ca8e789071fd9e363 151 SUPERFAMILY SSF55804 6 147 1.83E-33 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 AMK43_RS10775 3d2c79da293cf86ca8e789071fd9e363 151 PANTHER PTHR36203 1 151 8.3E-39 T 22-04-2016 AMK43_RS10775 3d2c79da293cf86ca8e789071fd9e363 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 9 147 1.2E-32 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS10775 3d2c79da293cf86ca8e789071fd9e363 151 Gene3D G3DSA:3.40.930.10 6 147 1.7E-49 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS06580 6230eeb6c42ae70cf0b8250829a71770 645 Gene3D G3DSA:3.60.21.10 520 555 1.0E-7 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS06580 6230eeb6c42ae70cf0b8250829a71770 645 Gene3D G3DSA:3.60.21.10 380 484 1.0E-7 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS06580 6230eeb6c42ae70cf0b8250829a71770 645 Gene3D G3DSA:3.60.21.10 178 260 1.0E-7 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS06580 6230eeb6c42ae70cf0b8250829a71770 645 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 5 636 5.9E-295 T 22-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 AMK43_RS06580 6230eeb6c42ae70cf0b8250829a71770 645 PIRSF PIRSF000906 1 639 1.4E-295 T 22-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 AMK43_RS06580 6230eeb6c42ae70cf0b8250829a71770 645 SUPERFAMILY SSF56300 178 244 4.83E-7 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS06580 6230eeb6c42ae70cf0b8250829a71770 645 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 3 638 38.182 T 22-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 AMK43_RS06085 86b5d31f7cfee585eeb3a33683be96ba 496 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 102 422 1.3E-14 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK43_RS06085 86b5d31f7cfee585eeb3a33683be96ba 496 Gene3D G3DSA:3.40.50.1100 204 444 1.6E-89 T 22-04-2016 AMK43_RS06085 86b5d31f7cfee585eeb3a33683be96ba 496 Gene3D G3DSA:3.40.50.1100 123 203 1.8E-8 T 22-04-2016 AMK43_RS06085 86b5d31f7cfee585eeb3a33683be96ba 496 SUPERFAMILY SSF53686 1 492 7.92E-134 T 22-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme AMK43_RS06085 86b5d31f7cfee585eeb3a33683be96ba 496 PANTHER PTHR10314 51 342 9.0E-119 T 22-04-2016 AMK43_RS06085 86b5d31f7cfee585eeb3a33683be96ba 496 PANTHER PTHR10314 24 35 9.0E-119 T 22-04-2016 AMK43_RS06085 86b5d31f7cfee585eeb3a33683be96ba 496 PANTHER PTHR10314 373 482 9.0E-119 T 22-04-2016 AMK43_RS06085 86b5d31f7cfee585eeb3a33683be96ba 496 TIGRFAM TIGR00260 thrC: threonine synthase 84 445 1.7E-68 T 22-04-2016 IPR004450 Threonine synthase-like AMK43_RS06085 86b5d31f7cfee585eeb3a33683be96ba 496 PANTHER PTHR10314:SF1 51 342 9.0E-119 T 22-04-2016 AMK43_RS06085 86b5d31f7cfee585eeb3a33683be96ba 496 PANTHER PTHR10314:SF1 24 35 9.0E-119 T 22-04-2016 AMK43_RS06085 86b5d31f7cfee585eeb3a33683be96ba 496 PANTHER PTHR10314:SF1 373 482 9.0E-119 T 22-04-2016 AMK43_RS06085 86b5d31f7cfee585eeb3a33683be96ba 496 Pfam PF14821 Threonine synthase N terminus 2 77 2.9E-19 T 22-04-2016 IPR029144 Threonine synthase, N-terminal AMK43_RS06085 86b5d31f7cfee585eeb3a33683be96ba 496 Gene3D G3DSA:3.90.1380.10 1 81 1.4E-22 T 22-04-2016 IPR029144 Threonine synthase, N-terminal AMK43_RS10105 d3dd305426a40837e3208529a1baae59 152 SUPERFAMILY SSF46785 14 130 6.43E-19 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS10105 d3dd305426a40837e3208529a1baae59 152 Gene3D G3DSA:1.10.10.10 5 147 4.0E-24 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS10105 d3dd305426a40837e3208529a1baae59 152 SMART SM00347 32 130 5.2E-4 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS10105 d3dd305426a40837e3208529a1baae59 152 Pfam PF12802 MarR family 45 89 2.6E-8 T 22-04-2016 AMK43_RS07470 8269249a5b06b8492f8d042fd999a053 300 SUPERFAMILY SSF144083 236 297 1.44E-10 T 22-04-2016 AMK43_RS07470 8269249a5b06b8492f8d042fd999a053 300 Gene3D G3DSA:1.20.58.340 226 298 3.9E-14 T 22-04-2016 AMK43_RS07470 8269249a5b06b8492f8d042fd999a053 300 Pfam PF01544 CorA-like Mg2+ transporter protein 22 297 1.0E-28 T 22-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 AMK43_RS07470 8269249a5b06b8492f8d042fd999a053 300 SUPERFAMILY SSF143865 21 235 1.7E-6 T 22-04-2016 AMK43_RS05510 400e529e35f48420bde14f214bbf4fb0 322 PANTHER PTHR30477:SF3 6 311 2.9E-105 T 22-04-2016 AMK43_RS05510 400e529e35f48420bde14f214bbf4fb0 322 Pfam PF00950 ABC 3 transport family 12 275 2.7E-66 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 AMK43_RS05510 400e529e35f48420bde14f214bbf4fb0 322 SUPERFAMILY SSF81345 17 272 5.89E-25 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK43_RS05510 400e529e35f48420bde14f214bbf4fb0 322 PANTHER PTHR30477 6 311 2.9E-105 T 22-04-2016 AMK43_RS05510 400e529e35f48420bde14f214bbf4fb0 322 Gene3D G3DSA:1.10.3470.10 46 278 2.2E-6 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK43_RS05285 3e190cd5b8f39b163381ffc1818f8792 331 PANTHER PTHR35271 44 329 7.7E-52 T 22-04-2016 AMK43_RS05285 3e190cd5b8f39b163381ffc1818f8792 331 Gene3D G3DSA:3.40.50.2300 41 161 1.5E-38 T 22-04-2016 AMK43_RS05285 3e190cd5b8f39b163381ffc1818f8792 331 Pfam PF04392 ABC transporter substrate binding protein 44 326 6.6E-76 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein AMK43_RS05285 3e190cd5b8f39b163381ffc1818f8792 331 Gene3D G3DSA:3.40.50.2300 162 295 6.5E-43 T 22-04-2016 AMK43_RS05285 3e190cd5b8f39b163381ffc1818f8792 331 SUPERFAMILY SSF53822 58 258 6.48E-9 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK43_RS03825 9fa34799e30f268a8bdf1cc79fc62323 362 PANTHER PTHR21152:SF21 4 358 7.1E-100 T 22-04-2016 AMK43_RS03825 9fa34799e30f268a8bdf1cc79fc62323 362 Pfam PF00266 Aminotransferase class-V 26 349 7.6E-42 T 22-04-2016 IPR000192 Aminotransferase class V domain AMK43_RS03825 9fa34799e30f268a8bdf1cc79fc62323 362 PIRSF PIRSF000524 1 361 1.5E-107 T 22-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 AMK43_RS03825 9fa34799e30f268a8bdf1cc79fc62323 362 Gene3D G3DSA:3.40.640.10 22 253 1.3E-49 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS03825 9fa34799e30f268a8bdf1cc79fc62323 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 181 201 - T 22-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site AMK43_RS03825 9fa34799e30f268a8bdf1cc79fc62323 362 Gene3D G3DSA:3.90.1150.10 254 359 2.8E-16 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS03825 9fa34799e30f268a8bdf1cc79fc62323 362 PANTHER PTHR21152 4 358 7.1E-100 T 22-04-2016 AMK43_RS03825 9fa34799e30f268a8bdf1cc79fc62323 362 SUPERFAMILY SSF53383 4 358 1.58E-84 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS01880 39783194f2b054e62537cd16f3f33bc2 2476 Pfam PF03797 Autotransporter beta-domain 2194 2462 6.5E-29 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS01880 39783194f2b054e62537cd16f3f33bc2 2476 SMART SM00869 2193 2468 2.5E-7 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS01880 39783194f2b054e62537cd16f3f33bc2 2476 SUPERFAMILY SSF103515 2164 2476 6.67E-20 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS07190 13b0db63fbfec34e61ed275826991134 164 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 17 161 1.0E-27 T 22-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 AMK43_RS07190 13b0db63fbfec34e61ed275826991134 164 Hamap MF_01398 ATP synthase subunit b [atpF]. 8 162 11.632 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMK43_RS07190 13b0db63fbfec34e61ed275826991134 164 PANTHER PTHR33445 1 164 1.3E-21 T 22-04-2016 AMK43_RS07190 13b0db63fbfec34e61ed275826991134 164 Pfam PF00430 ATP synthase B/B' CF(0) 14 143 6.0E-21 T 22-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 SUPERFAMILY SSF56327 175 442 1.08E-82 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 Pfam PF02056 Family 4 glycosyl hydrolase 8 186 4.0E-66 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 195 207 7.8E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 100 113 7.8E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 8 23 7.8E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 114 134 7.8E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 169 180 7.8E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 79 95 7.8E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 143 160 7.8E-47 T 22-04-2016 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 Gene3D G3DSA:3.90.110.10 172 438 1.8E-90 T 22-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 143 174 - T 22-04-2016 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 PANTHER PTHR32092:SF5 4 442 2.4E-235 T 22-04-2016 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 Gene3D G3DSA:3.40.50.720 6 170 7.0E-70 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 199 414 2.6E-50 T 22-04-2016 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 PANTHER PTHR32092 4 442 2.4E-235 T 22-04-2016 AMK43_RS10245 350acb803ce3dd6d64e1851e2ae5a2cb 450 SUPERFAMILY SSF51735 6 170 1.08E-54 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS07910 c2fa23f182b4f26964f46208919fe244 191 Pfam PF02674 Colicin V production protein 5 127 1.6E-13 T 22-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 AMK43_RS04845 50a95aa0d7e414054a28564c5cfc6c1f 292 SUPERFAMILY SSF53448 2 224 1.31E-40 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS04845 50a95aa0d7e414054a28564c5cfc6c1f 292 PANTHER PTHR22916 1 289 4.6E-31 T 22-04-2016 AMK43_RS04845 50a95aa0d7e414054a28564c5cfc6c1f 292 Pfam PF00535 Glycosyl transferase family 2 4 164 5.4E-28 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK43_RS04845 50a95aa0d7e414054a28564c5cfc6c1f 292 Gene3D G3DSA:3.90.550.10 1 228 8.0E-39 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS01825 c7b566bff647c50ff28fa265f2439ac2 271 Pfam PF03724 META domain 163 265 1.1E-19 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ AMK43_RS01825 c7b566bff647c50ff28fa265f2439ac2 271 Pfam PF03724 META domain 35 143 4.7E-21 T 22-04-2016 IPR005184 Domain of unknown function DUF306, Meta/HslJ AMK43_RS01825 c7b566bff647c50ff28fa265f2439ac2 271 PANTHER PTHR35535 54 267 1.3E-16 T 22-04-2016 AMK43_RS01825 c7b566bff647c50ff28fa265f2439ac2 271 PANTHER PTHR35535:SF2 54 267 1.3E-16 T 22-04-2016 AMK43_RS09530 a38d3d26edc24e727eb3d3903770ad36 273 Gene3D G3DSA:3.90.650.10 92 272 2.5E-22 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK43_RS09530 a38d3d26edc24e727eb3d3903770ad36 273 SUPERFAMILY SSF55326 2 89 8.55E-24 T 22-04-2016 AMK43_RS09530 a38d3d26edc24e727eb3d3903770ad36 273 TIGRFAM TIGR00476 selD: selenide, water dikinase 1 239 3.0E-89 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AMK43_RS09530 a38d3d26edc24e727eb3d3903770ad36 273 Pfam PF02769 AIR synthase related protein, C-terminal domain 96 272 4.5E-28 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK43_RS09530 a38d3d26edc24e727eb3d3903770ad36 273 Gene3D G3DSA:3.30.1330.10 3 90 1.3E-17 T 22-04-2016 IPR016188 PurM-like, N-terminal domain AMK43_RS09530 a38d3d26edc24e727eb3d3903770ad36 273 SUPERFAMILY SSF56042 90 268 4.93E-49 T 22-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain AMK43_RS09530 a38d3d26edc24e727eb3d3903770ad36 273 Pfam PF00586 AIR synthase related protein, N-terminal domain 2 84 4.2E-12 T 22-04-2016 IPR016188 PurM-like, N-terminal domain AMK43_RS09530 a38d3d26edc24e727eb3d3903770ad36 273 PANTHER PTHR10256 1 272 5.2E-80 T 22-04-2016 AMK43_RS09530 a38d3d26edc24e727eb3d3903770ad36 273 PIRSF PIRSF036407 1 273 7.7E-93 T 22-04-2016 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 AMK43_RS05550 f24055b96fd7de4632489f2b51e866ef 269 PANTHER PTHR22726 11 269 1.1E-66 T 22-04-2016 AMK43_RS05550 f24055b96fd7de4632489f2b51e866ef 269 Pfam PF01435 Peptidase family M48 76 258 9.8E-34 T 22-04-2016 IPR001915 Peptidase M48 GO:0004222|GO:0006508 AMK43_RS05550 f24055b96fd7de4632489f2b51e866ef 269 Gene3D G3DSA:3.30.2010.10 76 152 1.3E-13 T 22-04-2016 AMK43_RS08295 ca4d67987c2399bd9a82723d93da5f3e 254 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 3 43 2.7E-12 T 22-04-2016 IPR013422 CRISPR-associated protein Cas5, N-terminal AMK43_RS08295 ca4d67987c2399bd9a82723d93da5f3e 254 TIGRFAM TIGR01895 cas_Cas5t: CRISPR-associated protein Cas5, subtype I-B/TNEAP 1 162 2.9E-29 T 22-04-2016 IPR013337 CRISPR-associated protein Cas5, Tneap type AMK43_RS08295 ca4d67987c2399bd9a82723d93da5f3e 254 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 161 3.8E-9 T 22-04-2016 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 AMK43_RS10380 1966ceef140cd6a6d5183414b87d3787 112 PANTHER PTHR10245 5 111 3.3E-14 T 22-04-2016 AMK43_RS10380 1966ceef140cd6a6d5183414b87d3787 112 Pfam PF12844 Helix-turn-helix domain 5 67 5.6E-17 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK43_RS10380 1966ceef140cd6a6d5183414b87d3787 112 SUPERFAMILY SSF47413 2 68 8.45E-17 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS10380 1966ceef140cd6a6d5183414b87d3787 112 SMART SM00530 7 62 5.5E-15 T 22-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 AMK43_RS10380 1966ceef140cd6a6d5183414b87d3787 112 Gene3D G3DSA:1.10.260.40 1 66 6.9E-20 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS09050 4168754862ce63c3b1e1ed4057877d5d 300 SUPERFAMILY SSF53067 2 296 7.7E-61 T 22-04-2016 AMK43_RS09050 4168754862ce63c3b1e1ed4057877d5d 300 Gene3D G3DSA:3.30.420.40 141 281 8.5E-38 T 22-04-2016 AMK43_RS09050 4168754862ce63c3b1e1ed4057877d5d 300 PANTHER PTHR18964:SF131 1 297 2.9E-63 T 22-04-2016 AMK43_RS09050 4168754862ce63c3b1e1ed4057877d5d 300 PANTHER PTHR18964 1 297 2.9E-63 T 22-04-2016 AMK43_RS09050 4168754862ce63c3b1e1ed4057877d5d 300 Pfam PF00480 ROK family 4 293 7.3E-50 T 22-04-2016 IPR000600 ROK family AMK43_RS09050 4168754862ce63c3b1e1ed4057877d5d 300 Gene3D G3DSA:3.30.420.40 1 140 6.3E-43 T 22-04-2016 AMK43_RS03220 9b5ff55df9b7b6d4be2b3ae3558d4a4c 71 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 8 57 2.7E-10 T 22-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 AMK43_RS03220 9b5ff55df9b7b6d4be2b3ae3558d4a4c 71 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 10 57 2.7E-9 T 22-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 AMK43_RS03220 9b5ff55df9b7b6d4be2b3ae3558d4a4c 71 Gene3D G3DSA:1.20.5.1030 8 60 2.4E-11 T 22-04-2016 AMK43_RS00365 85daa8c05f16c4aee89385d35970897a 490 PANTHER PTHR30252 1 481 2.3E-148 T 22-04-2016 AMK43_RS00365 85daa8c05f16c4aee89385d35970897a 490 PANTHER PTHR30252:SF0 1 481 2.3E-148 T 22-04-2016 AMK43_RS00365 85daa8c05f16c4aee89385d35970897a 490 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 320 430 2.4E-24 T 22-04-2016 IPR025299 CstA, C-terminal domain AMK43_RS00365 85daa8c05f16c4aee89385d35970897a 490 Pfam PF02554 Carbon starvation protein CstA 158 292 6.3E-19 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AMK43_RS00365 85daa8c05f16c4aee89385d35970897a 490 Pfam PF02554 Carbon starvation protein CstA 4 144 4.8E-33 T 22-04-2016 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 AMK43_RS02325 16003736d90fec93ee48fc16fffc6672 157 Pfam PF00583 Acetyltransferase (GNAT) family 80 135 2.9E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS02325 16003736d90fec93ee48fc16fffc6672 157 SUPERFAMILY SSF55729 25 155 1.43E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS02325 16003736d90fec93ee48fc16fffc6672 157 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 24 153 2.7E-26 T 22-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 AMK43_RS02325 16003736d90fec93ee48fc16fffc6672 157 Gene3D G3DSA:3.40.630.30 21 146 3.8E-24 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS02325 16003736d90fec93ee48fc16fffc6672 157 PANTHER PTHR23091 24 156 1.8E-18 T 22-04-2016 AMK43_RS05120 1cf18e4e63adc60718f6a03625936706 119 Gene3D G3DSA:3.90.80.10 18 109 2.5E-10 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK43_RS05120 1cf18e4e63adc60718f6a03625936706 119 Pfam PF00719 Inorganic pyrophosphatase 18 108 5.0E-5 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK43_RS05120 1cf18e4e63adc60718f6a03625936706 119 SUPERFAMILY SSF50324 16 113 8.37E-13 T 22-04-2016 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|Reactome: REACT_21259|Reactome: REACT_71 AMK43_RS08890 603ced0692b11d29570755d108353f89 264 PANTHER PTHR33392:SF5 22 261 3.8E-44 T 22-04-2016 AMK43_RS08890 603ced0692b11d29570755d108353f89 264 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 42 186 2.2E-33 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain AMK43_RS08890 603ced0692b11d29570755d108353f89 264 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 42 185 8.3E-35 T 22-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain AMK43_RS08890 603ced0692b11d29570755d108353f89 264 PANTHER PTHR33392 22 261 3.8E-44 T 22-04-2016 AMK43_RS04665 6cb86602a73fcd174221c354b130cca8 266 Gene3D G3DSA:3.40.190.10 29 158 2.1E-51 T 22-04-2016 AMK43_RS04665 6cb86602a73fcd174221c354b130cca8 266 PANTHER PTHR30429 1 266 7.0E-120 T 22-04-2016 IPR004872 Lipoprotein NlpA family AMK43_RS04665 6cb86602a73fcd174221c354b130cca8 266 SUPERFAMILY SSF53850 30 266 3.09E-78 T 22-04-2016 AMK43_RS04665 6cb86602a73fcd174221c354b130cca8 266 Pfam PF03180 NLPA lipoprotein 31 266 1.3E-88 T 22-04-2016 IPR004872 Lipoprotein NlpA family AMK43_RS04665 6cb86602a73fcd174221c354b130cca8 266 PIRSF PIRSF002854 1 266 5.8E-97 T 22-04-2016 IPR004872 Lipoprotein NlpA family AMK43_RS08605 3ab556ce7c0da467ea4800d9d19eaa65 72 PANTHER PTHR33217 2 72 1.3E-22 T 22-04-2016 AMK43_RS08605 3ab556ce7c0da467ea4800d9d19eaa65 72 Pfam PF00872 Transposase, Mutator family 2 51 3.3E-10 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AMK43_RS09405 86232738036be4a371fce28d8a3057d7 278 PANTHER PTHR32243 1 278 6.7E-89 T 22-04-2016 AMK43_RS09405 86232738036be4a371fce28d8a3057d7 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 267 2.5E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09405 86232738036be4a371fce28d8a3057d7 278 Gene3D G3DSA:1.10.3720.10 6 265 1.5E-60 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09405 86232738036be4a371fce28d8a3057d7 278 SUPERFAMILY SSF161098 7 278 1.21E-68 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS06095 cd2fc69346ade016267d6b262aa5ae81 567 Pfam PF09818 Predicted ATPase of the ABC class 6 451 5.9E-192 T 22-04-2016 IPR019195 ABC transporter, ATPase, putative AMK43_RS06095 cd2fc69346ade016267d6b262aa5ae81 567 PANTHER PTHR38149 10 566 5.3E-147 T 22-04-2016 AMK43_RS06095 cd2fc69346ade016267d6b262aa5ae81 567 SUPERFAMILY SSF52540 240 418 1.95E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS06095 cd2fc69346ade016267d6b262aa5ae81 567 Gene3D G3DSA:3.40.50.300 245 414 1.7E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10510 2dd1ed54301ccbe1cb51b277119f3e86 144 Pfam PF07007 Protein of unknown function (DUF1311) 48 136 1.3E-16 T 22-04-2016 IPR009739 Protein of unknown function DUF1311 AMK43_RS10510 2dd1ed54301ccbe1cb51b277119f3e86 144 PANTHER PTHR39176 15 143 3.2E-15 T 22-04-2016 AMK43_RS10510 2dd1ed54301ccbe1cb51b277119f3e86 144 PANTHER PTHR39176:SF1 15 143 3.2E-15 T 22-04-2016 AMK43_RS10250 c3578a8d4b60dcb7c30737167b1414b9 280 Pfam PF01380 SIS domain 128 254 6.8E-18 T 22-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 AMK43_RS10250 c3578a8d4b60dcb7c30737167b1414b9 280 PANTHER PTHR30514:SF1 1 276 4.2E-53 T 22-04-2016 AMK43_RS10250 c3578a8d4b60dcb7c30737167b1414b9 280 SUPERFAMILY SSF46689 2 73 4.66E-14 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS10250 c3578a8d4b60dcb7c30737167b1414b9 280 Gene3D G3DSA:3.40.50.10490 108 272 3.2E-27 T 22-04-2016 AMK43_RS10250 c3578a8d4b60dcb7c30737167b1414b9 280 Gene3D G3DSA:1.10.10.10 1 73 1.2E-17 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS10250 c3578a8d4b60dcb7c30737167b1414b9 280 SUPERFAMILY SSF53697 92 271 3.4E-33 T 22-04-2016 AMK43_RS10250 c3578a8d4b60dcb7c30737167b1414b9 280 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 73 2.9E-15 T 22-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 AMK43_RS10250 c3578a8d4b60dcb7c30737167b1414b9 280 PANTHER PTHR30514 1 276 4.2E-53 T 22-04-2016 AMK43_RS04385 af749d11ec6ed1f2fddfbc7ad709da5e 95 PANTHER PTHR37828 1 91 2.0E-20 T 22-04-2016 AMK43_RS04385 af749d11ec6ed1f2fddfbc7ad709da5e 95 PANTHER PTHR37828:SF1 1 91 2.0E-20 T 22-04-2016 AMK43_RS04385 af749d11ec6ed1f2fddfbc7ad709da5e 95 Gene3D G3DSA:3.30.70.1060 3 83 1.4E-10 T 22-04-2016 AMK43_RS04385 af749d11ec6ed1f2fddfbc7ad709da5e 95 Pfam PF03795 YCII-related domain 4 81 1.7E-11 T 22-04-2016 IPR005545 YCII-related AMK43_RS04385 af749d11ec6ed1f2fddfbc7ad709da5e 95 SUPERFAMILY SSF54909 2 84 1.42E-16 T 22-04-2016 IPR011008 Dimeric alpha-beta barrel AMK43_RS10490 196a34f7f8ff8282cbd60b8975e3a000 416 Gene3D G3DSA:3.40.30.10 33 108 3.9E-9 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS10490 196a34f7f8ff8282cbd60b8975e3a000 416 SUPERFAMILY SSF52833 17 121 2.95E-8 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS01085 c2b6866a87c454843a9af9e89ca9729b 764 Pfam PF02901 Pyruvate formate lyase-like 3 625 1.9E-198 T 22-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 AMK43_RS01085 c2b6866a87c454843a9af9e89ca9729b 764 PANTHER PTHR30191:SF4 3 764 0.0 T 22-04-2016 AMK43_RS01085 c2b6866a87c454843a9af9e89ca9729b 764 PANTHER PTHR30191 3 764 0.0 T 22-04-2016 AMK43_RS01085 c2b6866a87c454843a9af9e89ca9729b 764 SUPERFAMILY SSF51998 2 763 1.95E-215 T 22-04-2016 AMK43_RS01085 c2b6866a87c454843a9af9e89ca9729b 764 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 2 764 1.2E-300 T 22-04-2016 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 AMK43_RS01085 c2b6866a87c454843a9af9e89ca9729b 764 Gene3D G3DSA:3.20.70.20 2 763 4.4E-247 T 22-04-2016 AMK43_RS01085 c2b6866a87c454843a9af9e89ca9729b 764 Pfam PF01228 Glycine radical 645 745 1.1E-23 T 22-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 AMK43_RS01085 c2b6866a87c454843a9af9e89ca9729b 764 ProSitePatterns PS00850 Glycine radical domain signature. 735 743 - T 22-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site AMK43_RS06660 1cd1200ee0fc949cfe674416d12ec869 307 Pfam PF04227 Indigoidine synthase A like protein 11 301 6.5E-137 T 22-04-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMK43_RS06660 1cd1200ee0fc949cfe674416d12ec869 307 PANTHER PTHR10584 6 220 1.2E-92 T 22-04-2016 AMK43_RS06660 1cd1200ee0fc949cfe674416d12ec869 307 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 10 304 44.463 T 22-04-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMK43_RS06660 1cd1200ee0fc949cfe674416d12ec869 307 PANTHER PTHR10584:SF1 6 220 1.2E-92 T 22-04-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 AMK43_RS06660 1cd1200ee0fc949cfe674416d12ec869 307 SUPERFAMILY SSF110581 4 302 9.94E-120 T 22-04-2016 AMK43_RS03535 4826aad8f8c45b7278d770536c4018c4 348 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 2 348 7.1E-161 T 22-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 AMK43_RS03535 4826aad8f8c45b7278d770536c4018c4 348 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 3 348 1.9E-150 T 22-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 AMK43_RS10845 3b9fe98807ee203ff9d097da88c8e4c8 190 PANTHER PTHR35795 1 188 6.5E-47 T 22-04-2016 AMK43_RS10845 3b9fe98807ee203ff9d097da88c8e4c8 190 SMART SM00471 14 145 1.4E-10 T 22-04-2016 IPR003607 HD/PDEase domain AMK43_RS10845 3b9fe98807ee203ff9d097da88c8e4c8 190 Pfam PF01966 HD domain 18 134 2.9E-14 T 22-04-2016 IPR006674 HD domain AMK43_RS10845 3b9fe98807ee203ff9d097da88c8e4c8 190 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 10 184 2.1E-40 T 22-04-2016 IPR005249 Conserved hypothetical protein CHP00488 AMK43_RS10845 3b9fe98807ee203ff9d097da88c8e4c8 190 SUPERFAMILY SSF109604 4 188 1.54E-32 T 22-04-2016 AMK43_RS10845 3b9fe98807ee203ff9d097da88c8e4c8 190 Gene3D G3DSA:1.10.3210.10 1 187 4.8E-52 T 22-04-2016 IPR006674 HD domain AMK43_RS01255 16b42b46ef1e19bb1356958385cf59d1 341 SUPERFAMILY SSF53383 1 341 1.25E-74 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS01255 16b42b46ef1e19bb1356958385cf59d1 341 Gene3D G3DSA:3.90.1150.10 255 341 8.7E-34 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS01255 16b42b46ef1e19bb1356958385cf59d1 341 PANTHER PTHR10289:SF8 1 341 2.1E-128 T 22-04-2016 AMK43_RS01255 16b42b46ef1e19bb1356958385cf59d1 341 Gene3D G3DSA:3.40.640.10 1 252 1.3E-61 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS01255 16b42b46ef1e19bb1356958385cf59d1 341 Pfam PF01212 Beta-eliminating lyase 10 294 4.2E-27 T 22-04-2016 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 AMK43_RS01255 16b42b46ef1e19bb1356958385cf59d1 341 PANTHER PTHR10289 1 341 2.1E-128 T 22-04-2016 AMK43_RS02890 9f697580281399d6d3b67d3b008cb365 180 Pfam PF07155 ECF-type riboflavin transporter, S component 5 168 1.6E-40 T 22-04-2016 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 AMK43_RS02890 9f697580281399d6d3b67d3b008cb365 180 Hamap MF_01572 UPF0397 protein . 2 180 23.107 T 22-04-2016 IPR022914 Protein of unknown function UPF0397 AMK43_RS02890 9f697580281399d6d3b67d3b008cb365 180 PANTHER PTHR37815 1 180 2.6E-57 T 22-04-2016 AMK43_RS02890 9f697580281399d6d3b67d3b008cb365 180 PANTHER PTHR37815:SF2 1 180 2.6E-57 T 22-04-2016 AMK43_RS02365 8b62db1c721fed6a1947bb5e5b50b460 230 PANTHER PTHR20855:SF3 28 228 1.3E-57 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 AMK43_RS02365 8b62db1c721fed6a1947bb5e5b50b460 230 Pfam PF03006 Haemolysin-III related 28 223 1.3E-33 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AMK43_RS02365 8b62db1c721fed6a1947bb5e5b50b460 230 PANTHER PTHR20855 28 228 1.3E-57 T 22-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 AMK43_RS02365 8b62db1c721fed6a1947bb5e5b50b460 230 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 30 229 7.4E-61 T 22-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 AMK43_RS01735 b15fd3231fc211210d7420e19845bd4a 349 Gene3D G3DSA:3.40.50.1980 162 322 3.2E-33 T 22-04-2016 AMK43_RS01735 b15fd3231fc211210d7420e19845bd4a 349 PANTHER PTHR30535:SF13 9 343 6.3E-79 T 22-04-2016 AMK43_RS01735 b15fd3231fc211210d7420e19845bd4a 349 Gene3D G3DSA:3.40.50.1980 31 158 9.8E-18 T 22-04-2016 AMK43_RS01735 b15fd3231fc211210d7420e19845bd4a 349 SUPERFAMILY SSF53807 36 347 7.06E-65 T 22-04-2016 AMK43_RS01735 b15fd3231fc211210d7420e19845bd4a 349 PANTHER PTHR30535 9 343 6.3E-79 T 22-04-2016 AMK43_RS01735 b15fd3231fc211210d7420e19845bd4a 349 Pfam PF01497 Periplasmic binding protein 52 281 8.8E-25 T 22-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 AMK43_RS06960 8a35c0c6e33ae5f6ea54049bcbb35ab4 596 PIRSF PIRSF002741 1 583 7.1E-67 T 22-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 AMK43_RS06960 8a35c0c6e33ae5f6ea54049bcbb35ab4 596 PANTHER PTHR30290 117 568 8.3E-76 T 22-04-2016 AMK43_RS06960 8a35c0c6e33ae5f6ea54049bcbb35ab4 596 SUPERFAMILY SSF53850 48 570 2.71E-98 T 22-04-2016 AMK43_RS06960 8a35c0c6e33ae5f6ea54049bcbb35ab4 596 Gene3D G3DSA:3.10.105.10 346 555 5.2E-37 T 22-04-2016 AMK43_RS06960 8a35c0c6e33ae5f6ea54049bcbb35ab4 596 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 107 489 1.2E-72 T 22-04-2016 IPR000914 Solute-binding protein family 5 domain AMK43_RS06960 8a35c0c6e33ae5f6ea54049bcbb35ab4 596 Gene3D G3DSA:3.40.190.10 184 345 6.2E-31 T 22-04-2016 AMK43_RS06960 8a35c0c6e33ae5f6ea54049bcbb35ab4 596 Gene3D G3DSA:3.90.76.10 93 183 1.2E-21 T 22-04-2016 AMK43_RS06905 51ec8158499552acc961b24150bb9920 332 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 13 66 1.4E-12 T 22-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 AMK43_RS06905 51ec8158499552acc961b24150bb9920 332 PANTHER PTHR30349:SF20 13 307 4.5E-41 T 22-04-2016 AMK43_RS06905 51ec8158499552acc961b24150bb9920 332 Gene3D G3DSA:1.10.150.130 12 107 2.8E-11 T 22-04-2016 IPR023109 Integrase/recombinase, N-terminal AMK43_RS06905 51ec8158499552acc961b24150bb9920 332 PANTHER PTHR30349 13 307 4.5E-41 T 22-04-2016 AMK43_RS06905 51ec8158499552acc961b24150bb9920 332 SUPERFAMILY SSF56349 12 312 7.95E-58 T 22-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 AMK43_RS06905 51ec8158499552acc961b24150bb9920 332 Gene3D G3DSA:1.10.443.10 124 312 4.6E-40 T 22-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK43_RS06905 51ec8158499552acc961b24150bb9920 332 Pfam PF00589 Phage integrase family 126 305 5.1E-26 T 22-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 AMK43_RS04130 024db914ac8866d16fb1438ad1e2aa28 208 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 42 158 1.3E-35 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK43_RS04130 024db914ac8866d16fb1438ad1e2aa28 208 SUPERFAMILY SSF50891 40 170 4.38E-43 T 22-04-2016 IPR029000 Cyclophilin-like domain AMK43_RS04130 024db914ac8866d16fb1438ad1e2aa28 208 PANTHER PTHR11071 41 168 4.1E-44 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 AMK43_RS04130 024db914ac8866d16fb1438ad1e2aa28 208 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 3.5E-21 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK43_RS04130 024db914ac8866d16fb1438ad1e2aa28 208 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 69 3.5E-21 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK43_RS04130 024db914ac8866d16fb1438ad1e2aa28 208 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 135 3.5E-21 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK43_RS04130 024db914ac8866d16fb1438ad1e2aa28 208 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 80 92 3.5E-21 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK43_RS04130 024db914ac8866d16fb1438ad1e2aa28 208 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 147 3.5E-21 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK43_RS04130 024db914ac8866d16fb1438ad1e2aa28 208 Gene3D G3DSA:2.40.100.10 31 167 6.3E-46 T 22-04-2016 IPR029000 Cyclophilin-like domain AMK43_RS08415 2e9be200ab5c4af89c8e8cd5f6291955 288 PANTHER PTHR21363:SF0 4 285 2.1E-39 T 22-04-2016 AMK43_RS08415 2e9be200ab5c4af89c8e8cd5f6291955 288 SUPERFAMILY SSF48179 183 286 1.36E-24 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK43_RS08415 2e9be200ab5c4af89c8e8cd5f6291955 288 PANTHER PTHR21363 4 285 2.1E-39 T 22-04-2016 AMK43_RS08415 2e9be200ab5c4af89c8e8cd5f6291955 288 Gene3D G3DSA:3.40.50.720 4 188 7.7E-25 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS08415 2e9be200ab5c4af89c8e8cd5f6291955 288 Pfam PF02153 Prephenate dehydrogenase 18 276 9.6E-49 T 22-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 AMK43_RS08415 2e9be200ab5c4af89c8e8cd5f6291955 288 SUPERFAMILY SSF51735 5 176 9.13E-32 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS04510 b9e1896c6a6d137bb759fe1757bf7f90 871 Gene3D G3DSA:3.30.420.40 439 531 2.2E-7 T 22-04-2016 AMK43_RS04510 b9e1896c6a6d137bb759fe1757bf7f90 871 SUPERFAMILY SSF53067 424 489 9.91E-10 T 22-04-2016 AMK43_RS04510 b9e1896c6a6d137bb759fe1757bf7f90 871 SUPERFAMILY SSF53067 560 612 9.91E-10 T 22-04-2016 AMK43_RS04510 b9e1896c6a6d137bb759fe1757bf7f90 871 SUPERFAMILY SSF53067 639 687 9.91E-10 T 22-04-2016 AMK43_RS04510 b9e1896c6a6d137bb759fe1757bf7f90 871 Gene3D G3DSA:3.30.420.40 343 438 1.7E-7 T 22-04-2016 AMK43_RS04510 b9e1896c6a6d137bb759fe1757bf7f90 871 Gene3D G3DSA:3.30.420.40 214 304 1.7E-7 T 22-04-2016 AMK43_RS04510 b9e1896c6a6d137bb759fe1757bf7f90 871 SUPERFAMILY SSF53067 214 374 4.09E-7 T 22-04-2016 AMK43_RS05200 3631faff247f95619d284bb67b27cd39 654 PANTHER PTHR11629 562 641 1.6E-14 T 22-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 AMK43_RS05200 3631faff247f95619d284bb67b27cd39 654 Pfam PF01496 V-type ATPase 116kDa subunit family 559 644 1.2E-7 T 22-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 AMK43_RS05200 3631faff247f95619d284bb67b27cd39 654 Pfam PF01496 V-type ATPase 116kDa subunit family 113 433 5.8E-15 T 22-04-2016 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family GO:0015078|GO:0015991|GO:0033179 AMK43_RS08850 e4e8204902f527206499ec4a89e20782 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 97 109 4.1E-27 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK43_RS08850 e4e8204902f527206499ec4a89e20782 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 16 31 4.1E-27 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK43_RS08850 e4e8204902f527206499ec4a89e20782 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 42 54 4.1E-27 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK43_RS08850 e4e8204902f527206499ec4a89e20782 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 82 97 4.1E-27 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK43_RS08850 e4e8204902f527206499ec4a89e20782 165 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 110 125 4.1E-27 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK43_RS08850 e4e8204902f527206499ec4a89e20782 165 SUPERFAMILY SSF50891 2 135 1.75E-52 T 22-04-2016 IPR029000 Cyclophilin-like domain AMK43_RS08850 e4e8204902f527206499ec4a89e20782 165 Gene3D G3DSA:2.40.100.10 1 138 5.5E-54 T 22-04-2016 IPR029000 Cyclophilin-like domain AMK43_RS08850 e4e8204902f527206499ec4a89e20782 165 PANTHER PTHR11071 4 132 5.1E-58 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 AMK43_RS08850 e4e8204902f527206499ec4a89e20782 165 PIRSF PIRSF001467 1 155 5.7E-48 T 22-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 AMK43_RS08850 e4e8204902f527206499ec4a89e20782 165 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 37 54 - T 22-04-2016 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 AMK43_RS08850 e4e8204902f527206499ec4a89e20782 165 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 3 133 2.2E-41 T 22-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 AMK43_RS02295 a8ad2e08fb9a35d9a68be700db958b71 219 PANTHER PTHR37314:SF2 1 217 9.6E-62 T 22-04-2016 AMK43_RS02295 a8ad2e08fb9a35d9a68be700db958b71 219 PANTHER PTHR37314 1 217 9.6E-62 T 22-04-2016 AMK43_RS02295 a8ad2e08fb9a35d9a68be700db958b71 219 Pfam PF06912 Protein of unknown function (DUF1275) 14 211 2.1E-48 T 22-04-2016 IPR010699 Protein of unknown function DUF1275 AMK43_RS01115 3712ddf35e2a88a3fca1b10e130e9392 459 PANTHER PTHR11785:SF341 2 431 1.6E-122 T 22-04-2016 AMK43_RS01115 3712ddf35e2a88a3fca1b10e130e9392 459 PANTHER PTHR11785 2 431 1.6E-122 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMK43_RS01115 3712ddf35e2a88a3fca1b10e130e9392 459 Pfam PF13520 Amino acid permease 8 420 4.6E-42 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMK43_RS01115 3712ddf35e2a88a3fca1b10e130e9392 459 PIRSF PIRSF006060 1 459 4.3E-57 T 22-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 AMK43_RS00815 f35388af285a010cb8225703e10b17ac 100 Pfam PF02553 Cobalt transport protein component CbiN 13 78 1.0E-25 T 22-04-2016 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 UniPathway: UPA00148 AMK43_RS00815 f35388af285a010cb8225703e10b17ac 100 PANTHER PTHR38662 8 100 2.5E-33 T 22-04-2016 AMK43_RS00815 f35388af285a010cb8225703e10b17ac 100 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 100 39.852 T 22-04-2016 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 UniPathway: UPA00148 AMK43_RS09730 d823b3731b5313c87f45fa1088044019 507 Gene3D G3DSA:3.40.47.10 77 92 4.0E-23 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS09730 d823b3731b5313c87f45fa1088044019 507 Gene3D G3DSA:3.40.47.10 184 291 4.0E-23 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS09730 d823b3731b5313c87f45fa1088044019 507 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 248 326 2.4E-9 T 22-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 AMK43_RS09730 d823b3731b5313c87f45fa1088044019 507 SUPERFAMILY SSF53901 176 285 4.71E-14 T 22-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 AMK43_RS06920 bf7912b336dca8f6f626f618991cab9d 372 SUPERFAMILY SSF53383 48 370 2.79E-79 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS06920 bf7912b336dca8f6f626f618991cab9d 372 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 219 232 - T 22-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 AMK43_RS06920 bf7912b336dca8f6f626f618991cab9d 372 Pfam PF00155 Aminotransferase class I and II 50 362 9.0E-43 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK43_RS06920 bf7912b336dca8f6f626f618991cab9d 372 PANTHER PTHR11751 51 370 1.3E-92 T 22-04-2016 AMK43_RS06920 bf7912b336dca8f6f626f618991cab9d 372 PANTHER PTHR11751:SF388 51 370 1.3E-92 T 22-04-2016 AMK43_RS06920 bf7912b336dca8f6f626f618991cab9d 372 Gene3D G3DSA:3.90.1150.10 260 370 1.2E-19 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS06920 bf7912b336dca8f6f626f618991cab9d 372 Gene3D G3DSA:3.40.640.10 55 259 4.4E-57 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS04180 b70bdc48de216a9cb7739456093fe3b6 256 Pfam PF08239 Bacterial SH3 domain 197 251 1.2E-6 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type AMK43_RS06945 d414064dfdf44a91e030f36bff544874 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 29.041 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 AMK43_RS06945 d414064dfdf44a91e030f36bff544874 145 SUPERFAMILY SSF69500 1 144 3.53E-48 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain AMK43_RS06945 d414064dfdf44a91e030f36bff544874 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 3.7E-46 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 AMK43_RS06945 d414064dfdf44a91e030f36bff544874 145 Gene3D G3DSA:3.50.80.10 1 145 2.4E-50 T 22-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain AMK43_RS06945 d414064dfdf44a91e030f36bff544874 145 PANTHER PTHR10472 2 145 1.4E-55 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 AMK43_RS06945 d414064dfdf44a91e030f36bff544874 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 1.3E-47 T 22-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 AMK43_RS05355 111c88bb533571809a5483676f37e042 199 PANTHER PTHR30352 11 145 6.3E-32 T 22-04-2016 AMK43_RS05355 111c88bb533571809a5483676f37e042 199 Pfam PF13353 4Fe-4S single cluster domain 14 145 7.1E-31 T 22-04-2016 AMK43_RS05355 111c88bb533571809a5483676f37e042 199 SUPERFAMILY SSF102114 21 124 1.31E-10 T 22-04-2016 AMK43_RS05355 111c88bb533571809a5483676f37e042 199 PANTHER PTHR30352:SF2 11 145 6.3E-32 T 22-04-2016 AMK43_RS05355 111c88bb533571809a5483676f37e042 199 Pfam PF04055 Radical SAM superfamily 23 120 3.3E-7 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS05355 111c88bb533571809a5483676f37e042 199 Gene3D G3DSA:3.20.20.70 25 124 3.0E-12 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS02240 d0d34a2156196af007b683e0862b2c63 256 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS02240 d0d34a2156196af007b683e0862b2c63 256 PANTHER PTHR24220 15 231 2.0E-102 T 22-04-2016 AMK43_RS02240 d0d34a2156196af007b683e0862b2c63 256 Pfam PF00005 ABC transporter 30 168 2.1E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS02240 d0d34a2156196af007b683e0862b2c63 256 SMART SM00382 38 217 3.0E-10 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS02240 d0d34a2156196af007b683e0862b2c63 256 SUPERFAMILY SSF52540 13 221 1.01E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02240 d0d34a2156196af007b683e0862b2c63 256 PANTHER PTHR24220:SF14 15 231 2.0E-102 T 22-04-2016 AMK43_RS02240 d0d34a2156196af007b683e0862b2c63 256 Gene3D G3DSA:3.40.50.300 6 227 2.0E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS01120 05ba01f3addf188b00e9f35b67b49e1d 375 Pfam PF01458 Uncharacterized protein family (UPF0051) 129 349 4.2E-53 T 22-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 AMK43_RS01120 05ba01f3addf188b00e9f35b67b49e1d 375 PANTHER PTHR30508:SF0 85 375 5.6E-66 T 22-04-2016 AMK43_RS01120 05ba01f3addf188b00e9f35b67b49e1d 375 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 94 367 5.0E-76 T 22-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 AMK43_RS01120 05ba01f3addf188b00e9f35b67b49e1d 375 SUPERFAMILY SSF101960 14 375 1.44E-70 T 22-04-2016 AMK43_RS01120 05ba01f3addf188b00e9f35b67b49e1d 375 PANTHER PTHR30508 85 375 5.6E-66 T 22-04-2016 AMK43_RS08790 1ae5102045fa170bd3e8ce4b50877393 237 PANTHER PTHR24220:SF568 5 236 1.8E-133 T 22-04-2016 AMK43_RS08790 1ae5102045fa170bd3e8ce4b50877393 237 Gene3D G3DSA:3.40.50.300 3 233 2.3E-65 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08790 1ae5102045fa170bd3e8ce4b50877393 237 SUPERFAMILY SSF52540 3 235 6.12E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08790 1ae5102045fa170bd3e8ce4b50877393 237 PIRSF PIRSF039137 1 237 9.4E-113 T 22-04-2016 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 AMK43_RS08790 1ae5102045fa170bd3e8ce4b50877393 237 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS08790 1ae5102045fa170bd3e8ce4b50877393 237 Pfam PF00005 ABC transporter 19 164 5.9E-30 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS08790 1ae5102045fa170bd3e8ce4b50877393 237 PANTHER PTHR24220 5 236 1.8E-133 T 22-04-2016 AMK43_RS08790 1ae5102045fa170bd3e8ce4b50877393 237 SMART SM00382 28 214 1.0E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS07810 fa57ceea47acaab1f3668ef457986244 129 Pfam PF11594 Mediator complex subunit 28 49 123 2.8E-5 T 22-04-2016 IPR021640 Mediator complex, subunit Med28 AMK43_RS07810 fa57ceea47acaab1f3668ef457986244 129 Pfam PF09403 Adhesion protein FadA 1 124 3.6E-26 T 22-04-2016 IPR018543 Adhesion protein FadA AMK43_RS07780 fa57ceea47acaab1f3668ef457986244 129 Pfam PF11594 Mediator complex subunit 28 49 123 2.8E-5 T 22-04-2016 IPR021640 Mediator complex, subunit Med28 AMK43_RS07780 fa57ceea47acaab1f3668ef457986244 129 Pfam PF09403 Adhesion protein FadA 1 124 3.6E-26 T 22-04-2016 IPR018543 Adhesion protein FadA AMK43_RS08080 fe3fccf267d72868b89a652644e1afaa 167 Pfam PF16157 Domain of unknown function (DUF4865) 1 167 8.3E-55 T 22-04-2016 IPR032349 Protein of unknown function DUF4865 AMK43_RS03730 77939375fcad294747e2d2e172091ad4 348 Pfam PF04402 Protein of unknown function (DUF541) 26 138 5.2E-12 T 22-04-2016 IPR007497 Protein of unknown function DUF541 AMK43_RS03730 77939375fcad294747e2d2e172091ad4 348 Pfam PF04402 Protein of unknown function (DUF541) 148 345 1.7E-16 T 22-04-2016 IPR007497 Protein of unknown function DUF541 AMK43_RS04110 35003ce1c8e7d93fd15c4fc5ed83f93d 337 PANTHER PTHR24220 294 333 2.2E-95 T 22-04-2016 AMK43_RS04110 35003ce1c8e7d93fd15c4fc5ed83f93d 337 PANTHER PTHR24220 23 247 2.2E-95 T 22-04-2016 AMK43_RS04110 35003ce1c8e7d93fd15c4fc5ed83f93d 337 SUPERFAMILY SSF52540 23 250 4.18E-52 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04110 35003ce1c8e7d93fd15c4fc5ed83f93d 337 Gene3D G3DSA:3.40.50.300 24 252 2.4E-56 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04110 35003ce1c8e7d93fd15c4fc5ed83f93d 337 SMART SM00382 47 241 7.5E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS04110 35003ce1c8e7d93fd15c4fc5ed83f93d 337 Pfam PF00005 ABC transporter 39 182 5.2E-27 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS04110 35003ce1c8e7d93fd15c4fc5ed83f93d 337 PANTHER PTHR24220:SF333 294 333 2.2E-95 T 22-04-2016 AMK43_RS04110 35003ce1c8e7d93fd15c4fc5ed83f93d 337 PANTHER PTHR24220:SF333 23 247 2.2E-95 T 22-04-2016 AMK43_RS11390 ff6be77232a73863dde89fc747b45ad9 247 SMART SM00382 45 220 3.2E-12 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS11390 ff6be77232a73863dde89fc747b45ad9 247 PANTHER PTHR24220 22 243 2.9E-82 T 22-04-2016 AMK43_RS11390 ff6be77232a73863dde89fc747b45ad9 247 Pfam PF00005 ABC transporter 36 172 3.9E-21 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS11390 ff6be77232a73863dde89fc747b45ad9 247 SUPERFAMILY SSF52540 14 234 7.14E-47 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11390 ff6be77232a73863dde89fc747b45ad9 247 Gene3D G3DSA:3.40.50.300 14 233 3.5E-46 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11390 ff6be77232a73863dde89fc747b45ad9 247 PANTHER PTHR24220:SF530 22 243 2.9E-82 T 22-04-2016 AMK43_RS09120 00d23fddb689ebcf9a02e4e53f3e475c 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 106 9.0E-44 T 22-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain AMK43_RS09120 00d23fddb689ebcf9a02e4e53f3e475c 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 111 318 2.3E-78 T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK43_RS09120 00d23fddb689ebcf9a02e4e53f3e475c 447 Gene3D G3DSA:3.30.1490.20 125 198 2.6E-29 T 22-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 AMK43_RS09120 00d23fddb689ebcf9a02e4e53f3e475c 447 SUPERFAMILY SSF52440 1 109 2.81E-46 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK43_RS09120 00d23fddb689ebcf9a02e4e53f3e475c 447 SUPERFAMILY SSF51246 327 442 5.76E-45 T 22-04-2016 IPR011054 Rudiment single hybrid motif AMK43_RS09120 00d23fddb689ebcf9a02e4e53f3e475c 447 SUPERFAMILY SSF56059 79 339 1.59E-65 T 22-04-2016 AMK43_RS09120 00d23fddb689ebcf9a02e4e53f3e475c 447 SMART SM00878 332 438 9.0E-65 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal AMK43_RS09120 00d23fddb689ebcf9a02e4e53f3e475c 447 Pfam PF02785 Biotin carboxylase C-terminal domain 332 438 3.3E-41 T 22-04-2016 IPR005482 Biotin carboxylase, C-terminal AMK43_RS09120 00d23fddb689ebcf9a02e4e53f3e475c 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 282 289 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK43_RS09120 00d23fddb689ebcf9a02e4e53f3e475c 447 PANTHER PTHR18866 1 443 2.0E-295 T 22-04-2016 AMK43_RS09120 00d23fddb689ebcf9a02e4e53f3e475c 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 440 2.2E-222 T 22-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 AMK43_RS09120 00d23fddb689ebcf9a02e4e53f3e475c 447 Gene3D G3DSA:3.40.50.20 1 124 1.8E-47 T 22-04-2016 IPR016185 Pre-ATP-grasp domain AMK43_RS09120 00d23fddb689ebcf9a02e4e53f3e475c 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 149 163 - T 22-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 AMK43_RS09120 00d23fddb689ebcf9a02e4e53f3e475c 447 Gene3D G3DSA:3.30.470.20 199 442 5.3E-104 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK43_RS08160 dbe3b03d287254c3ee10fee628297a5c 162 PANTHER PTHR39173 1 148 1.8E-22 T 22-04-2016 AMK43_RS08160 dbe3b03d287254c3ee10fee628297a5c 162 Gene3D G3DSA:3.40.630.30 26 158 1.6E-16 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS08160 dbe3b03d287254c3ee10fee628297a5c 162 Pfam PF13302 Acetyltransferase (GNAT) domain 25 145 4.3E-12 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS08160 dbe3b03d287254c3ee10fee628297a5c 162 SUPERFAMILY SSF55729 7 156 5.5E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS09980 5a656d210d18a4569b8675e50234930c 63 SUPERFAMILY SSF54786 1 63 3.92E-15 T 22-04-2016 AMK43_RS09980 5a656d210d18a4569b8675e50234930c 63 Gene3D G3DSA:3.30.920.30 1 63 1.3E-23 T 22-04-2016 AMK43_RS09980 5a656d210d18a4569b8675e50234930c 63 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 6 62 2.1E-16 T 22-04-2016 IPR012933 HicA mRNA interferase family GO:0003729 AMK43_RS10815 cc4e7d5e2623c47786016b6699dc9a83 194 Pfam PF12836 Helix-hairpin-helix motif 55 114 3.2E-12 T 22-04-2016 AMK43_RS10815 cc4e7d5e2623c47786016b6699dc9a83 194 SUPERFAMILY SSF47781 55 117 2.0E-11 T 22-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 AMK43_RS10815 cc4e7d5e2623c47786016b6699dc9a83 194 Gene3D G3DSA:1.10.150.310 61 124 1.1E-7 T 22-04-2016 IPR023097 Tex RuvX-like domain AMK43_RS11075 db5e8c3c9fe19944bfbe7ced7f18d525 193 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 22-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 AMK43_RS11075 db5e8c3c9fe19944bfbe7ced7f18d525 193 PANTHER PTHR23416 29 184 2.2E-35 T 22-04-2016 AMK43_RS11075 db5e8c3c9fe19944bfbe7ced7f18d525 193 Gene3D G3DSA:2.160.10.10 39 190 1.1E-45 T 22-04-2016 AMK43_RS11075 db5e8c3c9fe19944bfbe7ced7f18d525 193 SUPERFAMILY SSF51161 39 184 4.02E-39 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK43_RS11075 db5e8c3c9fe19944bfbe7ced7f18d525 193 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 2.7E-10 T 22-04-2016 IPR001451 Hexapeptide repeat AMK43_RS02540 5226bf36772d3c30277c631843a12585 178 SUPERFAMILY SSF48371 62 166 2.41E-7 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMK43_RS02540 5226bf36772d3c30277c631843a12585 178 Gene3D G3DSA:1.25.10.10 66 86 2.4E-5 T 22-04-2016 IPR011989 Armadillo-like helical AMK43_RS02540 5226bf36772d3c30277c631843a12585 178 Gene3D G3DSA:1.25.10.10 126 170 2.4E-5 T 22-04-2016 IPR011989 Armadillo-like helical AMK43_RS08370 4623d86dd2c7d3e566f589b807493d56 135 SUPERFAMILY SSF55961 1 135 3.08E-34 T 22-04-2016 AMK43_RS01350 6af17f8af8e862298d8ed757bcdfdaa8 235 PANTHER PTHR30027 4 234 2.5E-51 T 22-04-2016 AMK43_RS01350 6af17f8af8e862298d8ed757bcdfdaa8 235 PIRSF PIRSF015601 2 235 2.8E-55 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS01350 6af17f8af8e862298d8ed757bcdfdaa8 235 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 232 2.1E-48 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS01350 6af17f8af8e862298d8ed757bcdfdaa8 235 Gene3D G3DSA:3.40.1280.10 7 230 4.0E-55 T 22-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal AMK43_RS01350 6af17f8af8e862298d8ed757bcdfdaa8 235 SUPERFAMILY SSF88697 12 67 7.79E-9 T 22-04-2016 IPR015947 PUA-like domain AMK43_RS01350 6af17f8af8e862298d8ed757bcdfdaa8 235 Pfam PF04452 RNA methyltransferase 20 230 1.3E-55 T 22-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS01350 6af17f8af8e862298d8ed757bcdfdaa8 235 SUPERFAMILY SSF75217 56 231 1.47E-37 T 22-04-2016 IPR029028 Alpha/beta knot methyltransferases AMK43_RS01350 6af17f8af8e862298d8ed757bcdfdaa8 235 PANTHER PTHR30027:SF3 4 234 2.5E-51 T 22-04-2016 AMK43_RS09115 b9a72c3f1460e536fe433a5eb231789f 135 PANTHER PTHR34297 1 135 9.5E-23 T 22-04-2016 AMK43_RS09115 b9a72c3f1460e536fe433a5eb231789f 135 Pfam PF03780 Asp23 family, cell envelope-related function 4 111 1.4E-25 T 22-04-2016 IPR005531 Alkaline shock protein Asp23 AMK43_RS05330 d02c5247eb6bbfe927f127dcf95e2140 625 SUPERFAMILY SSF53067 512 592 7.77E-6 T 22-04-2016 AMK43_RS05330 d02c5247eb6bbfe927f127dcf95e2140 625 SUPERFAMILY SSF53067 344 459 2.79E-5 T 22-04-2016 AMK43_RS05330 d02c5247eb6bbfe927f127dcf95e2140 625 SUPERFAMILY SSF53067 265 313 2.79E-5 T 22-04-2016 AMK43_RS05330 d02c5247eb6bbfe927f127dcf95e2140 625 Gene3D G3DSA:3.30.420.40 265 355 5.3E-7 T 22-04-2016 AMK43_RS05330 d02c5247eb6bbfe927f127dcf95e2140 625 Gene3D G3DSA:3.30.420.40 418 520 5.3E-7 T 22-04-2016 AMK43_RS05330 d02c5247eb6bbfe927f127dcf95e2140 625 Gene3D G3DSA:3.30.420.40 521 606 2.7E-5 T 22-04-2016 AMK43_RS04355 122a15d0914d8d26e5f782cca45138aa 392 SMART SM00028 301 335 160.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS04355 122a15d0914d8d26e5f782cca45138aa 392 SMART SM00028 166 199 16.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS04355 122a15d0914d8d26e5f782cca45138aa 392 SMART SM00028 236 269 9.3 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS04355 122a15d0914d8d26e5f782cca45138aa 392 SUPERFAMILY SSF48452 232 366 5.44E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS04355 122a15d0914d8d26e5f782cca45138aa 392 Gene3D G3DSA:1.25.40.10 208 364 3.4E-11 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS04355 122a15d0914d8d26e5f782cca45138aa 392 Gene3D G3DSA:1.25.40.10 126 199 1.1E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS04355 122a15d0914d8d26e5f782cca45138aa 392 Gene3D G3DSA:1.25.40.10 73 86 1.1E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS04355 122a15d0914d8d26e5f782cca45138aa 392 PANTHER PTHR23083 59 363 3.1E-17 T 22-04-2016 AMK43_RS04355 122a15d0914d8d26e5f782cca45138aa 392 PANTHER PTHR23083 4 37 3.1E-17 T 22-04-2016 AMK43_RS04355 122a15d0914d8d26e5f782cca45138aa 392 Pfam PF13181 Tetratricopeptide repeat 166 198 0.052 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS04355 122a15d0914d8d26e5f782cca45138aa 392 Pfam PF13181 Tetratricopeptide repeat 237 269 0.012 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS04355 122a15d0914d8d26e5f782cca45138aa 392 Pfam PF13181 Tetratricopeptide repeat 58 81 0.12 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS04355 122a15d0914d8d26e5f782cca45138aa 392 Gene3D G3DSA:1.25.40.10 20 72 1.5E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS04355 122a15d0914d8d26e5f782cca45138aa 392 SUPERFAMILY SSF81901 35 274 1.15E-10 T 22-04-2016 AMK43_RS04995 5da7b44e59cbb59b1dc6b31003c3350e 157 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 103 153 5.1E-16 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AMK43_RS04995 5da7b44e59cbb59b1dc6b31003c3350e 157 PANTHER PTHR35805 3 157 9.0E-53 T 22-04-2016 AMK43_RS04995 5da7b44e59cbb59b1dc6b31003c3350e 157 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 5 155 29.255 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AMK43_RS04995 5da7b44e59cbb59b1dc6b31003c3350e 157 Gene3D G3DSA:3.30.70.140 5 99 1.2E-31 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AMK43_RS04995 5da7b44e59cbb59b1dc6b31003c3350e 157 PANTHER PTHR35805:SF1 3 157 9.0E-53 T 22-04-2016 AMK43_RS04995 5da7b44e59cbb59b1dc6b31003c3350e 157 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 6 154 1.2E-47 T 22-04-2016 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 AMK43_RS04995 5da7b44e59cbb59b1dc6b31003c3350e 157 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 8 98 9.6E-29 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AMK43_RS04995 5da7b44e59cbb59b1dc6b31003c3350e 157 SUPERFAMILY SSF54893 6 101 1.57E-30 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AMK43_RS04995 5da7b44e59cbb59b1dc6b31003c3350e 157 SUPERFAMILY SSF57825 103 153 2.09E-11 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AMK43_RS04995 5da7b44e59cbb59b1dc6b31003c3350e 157 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 10 95 1.0E-11 T 22-04-2016 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal AMK43_RS04995 5da7b44e59cbb59b1dc6b31003c3350e 157 Gene3D G3DSA:2.30.30.20 101 154 1.1E-15 T 22-04-2016 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal AMK43_RS07080 87672f36af5ee3542e92258023038b8d 407 Pfam PF13308 YARHG domain 330 402 2.2E-18 T 22-04-2016 IPR025582 YARHG domain AMK43_RS07080 87672f36af5ee3542e92258023038b8d 407 SMART SM01324 324 403 2.2E-13 T 22-04-2016 IPR025582 YARHG domain AMK43_RS00990 1cbf9060e727f3ed532baa5e069aa528 342 Pfam PF00005 ABC transporter 19 165 2.6E-35 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS00990 1cbf9060e727f3ed532baa5e069aa528 342 PANTHER PTHR24220:SF150 4 307 3.7E-127 T 22-04-2016 AMK43_RS00990 1cbf9060e727f3ed532baa5e069aa528 342 SMART SM00382 27 215 5.7E-17 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS00990 1cbf9060e727f3ed532baa5e069aa528 342 PANTHER PTHR24220 4 307 3.7E-127 T 22-04-2016 AMK43_RS00990 1cbf9060e727f3ed532baa5e069aa528 342 Gene3D G3DSA:3.40.50.300 3 239 8.9E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00990 1cbf9060e727f3ed532baa5e069aa528 342 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS00990 1cbf9060e727f3ed532baa5e069aa528 342 SUPERFAMILY SSF52540 3 245 2.84E-84 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05825 9262c1a3b9021742f3ded31e04ce212a 399 Gene3D G3DSA:3.30.470.20 106 315 1.4E-22 T 22-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 AMK43_RS05825 9262c1a3b9021742f3ded31e04ce212a 399 SUPERFAMILY SSF56059 102 314 8.25E-31 T 22-04-2016 AMK43_RS05825 9262c1a3b9021742f3ded31e04ce212a 399 Pfam PF02222 ATP-grasp domain 122 191 1.1E-5 T 22-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 AMK43_RS01380 1c53988c3f66c8a1eb07041d1f8a85d1 153 PANTHER PTHR31446 6 147 1.0E-47 T 22-04-2016 AMK43_RS01380 1c53988c3f66c8a1eb07041d1f8a85d1 153 PANTHER PTHR31446:SF3 6 147 1.0E-47 T 22-04-2016 AMK43_RS01380 1c53988c3f66c8a1eb07041d1f8a85d1 153 Pfam PF02681 Divergent PAP2 family 8 142 1.2E-45 T 22-04-2016 IPR003832 Acid phosphatase/vanadium-dependent haloperoxidase-related AMK43_RS06240 38fe3153ec3cdc86498d5d68a176ecb4 380 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 59 299 1.9E-47 T 22-04-2016 IPR019079 Capsule synthesis protein, CapA AMK43_RS06240 38fe3153ec3cdc86498d5d68a176ecb4 380 PANTHER PTHR33393:SF2 56 298 2.5E-33 T 22-04-2016 AMK43_RS06240 38fe3153ec3cdc86498d5d68a176ecb4 380 SUPERFAMILY SSF56300 58 326 2.76E-34 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS06240 38fe3153ec3cdc86498d5d68a176ecb4 380 SMART SM00854 59 302 1.6E-56 T 22-04-2016 IPR019079 Capsule synthesis protein, CapA AMK43_RS06240 38fe3153ec3cdc86498d5d68a176ecb4 380 Gene3D G3DSA:3.60.21.30 87 302 5.6E-14 T 22-04-2016 AMK43_RS06240 38fe3153ec3cdc86498d5d68a176ecb4 380 PANTHER PTHR33393 56 298 2.5E-33 T 22-04-2016 AMK43_RS08565 eb2fc3f6c4fee761628748af52878da8 91 SUPERFAMILY SSF52794 1 90 5.23E-19 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS08565 eb2fc3f6c4fee761628748af52878da8 91 PANTHER PTHR33843:SF3 1 91 6.7E-26 T 22-04-2016 AMK43_RS08565 eb2fc3f6c4fee761628748af52878da8 91 PANTHER PTHR33843 1 91 6.7E-26 T 22-04-2016 AMK43_RS08565 eb2fc3f6c4fee761628748af52878da8 91 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 81 1.4E-12 T 22-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 AMK43_RS08565 eb2fc3f6c4fee761628748af52878da8 91 Gene3D G3DSA:3.40.50.270 1 91 2.4E-29 T 22-04-2016 AMK43_RS08765 b1e01ae0d20a720f6b1bbfeccda8390a 177 Pfam PF13505 Outer membrane protein beta-barrel domain 9 173 1.9E-19 T 22-04-2016 IPR027385 Outer membrane protein beta-barrel AMK43_RS08765 b1e01ae0d20a720f6b1bbfeccda8390a 177 Gene3D G3DSA:2.40.160.20 30 173 9.9E-11 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK43_RS08765 b1e01ae0d20a720f6b1bbfeccda8390a 177 SUPERFAMILY SSF56925 44 173 3.14E-15 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK43_RS02870 8d35fa4889b70e35913ca4d7796d97fc 130 SUPERFAMILY SSF52540 4 123 6.96E-5 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS02870 8d35fa4889b70e35913ca4d7796d97fc 130 Gene3D G3DSA:3.40.50.300 4 124 4.7E-6 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00685 12887ddd2ef4c4af7aaa968e402d78cf 374 Gene3D G3DSA:1.25.10.10 235 359 1.5E-5 T 22-04-2016 IPR011989 Armadillo-like helical AMK43_RS00685 12887ddd2ef4c4af7aaa968e402d78cf 374 SUPERFAMILY SSF48371 247 361 4.89E-5 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMK43_RS08490 82ed0354ea42dfdcc3d8c3c6a93c3ad2 293 PANTHER PTHR11122 196 290 7.5E-41 T 22-04-2016 AMK43_RS08490 82ed0354ea42dfdcc3d8c3c6a93c3ad2 293 PANTHER PTHR11122 11 166 7.5E-41 T 22-04-2016 AMK43_RS08490 82ed0354ea42dfdcc3d8c3c6a93c3ad2 293 PANTHER PTHR11122:SF14 196 290 7.5E-41 T 22-04-2016 AMK43_RS08490 82ed0354ea42dfdcc3d8c3c6a93c3ad2 293 PANTHER PTHR11122:SF14 11 166 7.5E-41 T 22-04-2016 AMK43_RS08490 82ed0354ea42dfdcc3d8c3c6a93c3ad2 293 SUPERFAMILY SSF74650 6 289 9.42E-51 T 22-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 AMK43_RS08490 82ed0354ea42dfdcc3d8c3c6a93c3ad2 293 Pfam PF01263 Aldose 1-epimerase 7 251 3.8E-29 T 22-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 AMK43_RS08490 82ed0354ea42dfdcc3d8c3c6a93c3ad2 293 Gene3D G3DSA:2.70.98.10 7 286 6.0E-26 T 22-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 AMK43_RS02665 ebe2372a03be41771aa5291204f473b0 407 Pfam PF03616 Sodium/glutamate symporter 5 374 1.2E-117 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AMK43_RS02665 ebe2372a03be41771aa5291204f473b0 407 PANTHER PTHR36178 1 407 1.1E-168 T 22-04-2016 AMK43_RS02665 ebe2372a03be41771aa5291204f473b0 407 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 5 405 1.9E-110 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AMK43_RS02665 ebe2372a03be41771aa5291204f473b0 407 PANTHER PTHR36178:SF1 1 407 1.1E-168 T 22-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 AMK43_RS10675 c63a349595f8735b7f20212d34dd34ef 174 Gene3D G3DSA:2.30.30.110 58 169 1.7E-17 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AMK43_RS10675 c63a349595f8735b7f20212d34dd34ef 174 SUPERFAMILY SSF50118 58 167 1.09E-14 T 22-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor AMK43_RS10675 c63a349595f8735b7f20212d34dd34ef 174 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 59 169 1.6E-14 T 22-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 AMK43_RS09125 e156d351147f6d363c81d25185ad69b8 133 Gene3D G3DSA:2.40.50.100 62 131 5.8E-10 T 22-04-2016 AMK43_RS09125 e156d351147f6d363c81d25185ad69b8 133 Pfam PF00364 Biotin-requiring enzyme 76 130 4.9E-6 T 22-04-2016 IPR000089 Biotin/lipoyl attachment AMK43_RS09125 e156d351147f6d363c81d25185ad69b8 133 SUPERFAMILY SSF51230 73 131 3.53E-9 T 22-04-2016 IPR011053 Single hybrid motif AMK43_RS11185 8607bb11e443bb19dbd5467d42824d6b 358 Pfam PF01050 Mannose-6-phosphate isomerase 317 356 4.1E-7 T 22-04-2016 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882|UniPathway: UPA00126 AMK43_RS11185 8607bb11e443bb19dbd5467d42824d6b 358 PANTHER PTHR12526 153 285 6.7E-41 T 22-04-2016 AMK43_RS11185 8607bb11e443bb19dbd5467d42824d6b 358 Gene3D G3DSA:3.90.550.10 2 273 8.4E-84 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11185 8607bb11e443bb19dbd5467d42824d6b 358 SUPERFAMILY SSF53448 2 283 9.27E-70 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11185 8607bb11e443bb19dbd5467d42824d6b 358 SUPERFAMILY SSF159283 286 350 1.14E-19 T 22-04-2016 AMK43_RS11185 8607bb11e443bb19dbd5467d42824d6b 358 Pfam PF00483 Nucleotidyl transferase 5 287 1.2E-50 T 22-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 AMK43_RS02980 c1c366d96e31599e300d4a6223a681ac 153 SUPERFAMILY SSF50199 13 143 1.44E-33 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK43_RS02980 c1c366d96e31599e300d4a6223a681ac 153 Gene3D G3DSA:2.40.50.90 13 137 2.8E-31 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK43_RS02980 c1c366d96e31599e300d4a6223a681ac 153 ProSitePatterns PS01284 Thermonuclease family signature 2. 80 90 - T 22-04-2016 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 AMK43_RS02980 c1c366d96e31599e300d4a6223a681ac 153 SMART SM00318 9 136 9.6E-32 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK43_RS02980 c1c366d96e31599e300d4a6223a681ac 153 Pfam PF00565 Staphylococcal nuclease homologue 40 133 2.2E-25 T 22-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold AMK43_RS02980 c1c366d96e31599e300d4a6223a681ac 153 PANTHER PTHR12302 14 153 1.5E-35 T 22-04-2016 AMK43_RS02980 c1c366d96e31599e300d4a6223a681ac 153 PANTHER PTHR12302:SF0 14 153 1.5E-35 T 22-04-2016 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PANTHER PTHR22912:SF48 1 308 8.8E-143 T 22-04-2016 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PANTHER PTHR22912 1 308 8.8E-143 T 22-04-2016 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 SUPERFAMILY SSF51905 1 304 7.26E-54 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 Gene3D G3DSA:3.50.50.60 1 106 2.2E-31 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 293 2.3E-52 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 132 152 - T 22-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 8.0E-39 T 22-04-2016 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 8.0E-39 T 22-04-2016 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 8.0E-39 T 22-04-2016 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 8.0E-39 T 22-04-2016 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 8.0E-39 T 22-04-2016 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 Gene3D G3DSA:3.50.50.60 107 299 1.8E-38 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 2 304 3.4E-119 T 22-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 140 164 3.9E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 57 67 3.9E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 103 111 3.9E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 267 285 3.9E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 36 51 3.9E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 3.9E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 232 253 3.9E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS10650 5670fc5848f3452cf567ec23c09d76ca 308 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 125 137 3.9E-69 T 22-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 AMK43_RS00850 37241e7034f76530f0ffe017392ac8e0 187 Pfam PF13847 Methyltransferase domain 33 106 2.7E-9 T 22-04-2016 IPR025714 Methyltransferase domain AMK43_RS00850 37241e7034f76530f0ffe017392ac8e0 187 PANTHER PTHR14741 3 148 9.3E-51 T 22-04-2016 AMK43_RS00850 37241e7034f76530f0ffe017392ac8e0 187 SUPERFAMILY SSF53335 3 139 2.74E-27 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS00850 37241e7034f76530f0ffe017392ac8e0 187 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 14 135 1.7E-35 T 22-04-2016 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377|UniPathway: UPA00148 AMK43_RS00850 37241e7034f76530f0ffe017392ac8e0 187 Gene3D G3DSA:3.40.50.150 4 187 4.3E-28 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS00850 37241e7034f76530f0ffe017392ac8e0 187 PANTHER PTHR14741:SF34 3 148 9.3E-51 T 22-04-2016 AMK43_RS09390 c7eea26238c00a01e0483f613d782827 277 Gene3D G3DSA:1.10.10.60 227 274 6.8E-13 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS09390 c7eea26238c00a01e0483f613d782827 277 Pfam PF12833 Helix-turn-helix domain 195 273 8.5E-17 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS09390 c7eea26238c00a01e0483f613d782827 277 PANTHER PTHR11019 1 276 5.6E-23 T 22-04-2016 AMK43_RS09390 c7eea26238c00a01e0483f613d782827 277 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 226 268 - T 22-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 AMK43_RS09390 c7eea26238c00a01e0483f613d782827 277 SUPERFAMILY SSF46689 226 273 2.42E-9 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS09390 c7eea26238c00a01e0483f613d782827 277 SUPERFAMILY SSF46689 173 223 2.24E-5 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS09390 c7eea26238c00a01e0483f613d782827 277 SUPERFAMILY SSF51215 12 150 1.57E-10 T 22-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 AMK43_RS09390 c7eea26238c00a01e0483f613d782827 277 SMART SM00342 189 272 1.0E-22 T 22-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 AMK43_RS09390 c7eea26238c00a01e0483f613d782827 277 Gene3D G3DSA:2.60.120.10 16 71 1.8E-8 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK43_RS09390 c7eea26238c00a01e0483f613d782827 277 Gene3D G3DSA:1.10.10.60 172 224 3.7E-7 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 Pfam PF00106 short chain dehydrogenase 3 182 9.2E-48 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 SUPERFAMILY SSF51735 2 265 1.31E-60 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 PANTHER PTHR24322:SF397 145 176 7.1E-56 T 22-04-2016 AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 PANTHER PTHR24322:SF397 7 129 7.1E-56 T 22-04-2016 AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 Gene3D G3DSA:3.40.50.720 2 270 3.9E-65 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 9.5E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 9.5E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.5E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 9.5E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 9.5E-26 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 PANTHER PTHR24322 145 176 7.1E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 PANTHER PTHR24322 7 129 7.1E-56 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 2.9E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 2.9E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS08660 a7fbcda02fde0210fd88860f2a9ed152 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 2.9E-11 T 22-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR AMK43_RS02650 9a88ec60d70a9c84d0d16e0a6a0c4d66 214 PANTHER PTHR10509 20 214 1.2E-53 T 22-04-2016 AMK43_RS02650 9a88ec60d70a9c84d0d16e0a6a0c4d66 214 Gene3D G3DSA:3.40.50.150 10 214 4.9E-52 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS02650 9a88ec60d70a9c84d0d16e0a6a0c4d66 214 PANTHER PTHR10509:SF14 20 214 1.2E-53 T 22-04-2016 AMK43_RS02650 9a88ec60d70a9c84d0d16e0a6a0c4d66 214 Pfam PF01596 O-methyltransferase 38 214 7.9E-35 T 22-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 AMK43_RS02650 9a88ec60d70a9c84d0d16e0a6a0c4d66 214 SUPERFAMILY SSF53335 19 214 4.3E-36 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07550 c708a41986da33039818eff4900b7626 474 PANTHER PTHR12994:SF17 6 437 9.5E-50 T 22-04-2016 AMK43_RS07550 c708a41986da33039818eff4900b7626 474 Pfam PF03577 Peptidase family C69 25 406 2.5E-110 T 22-04-2016 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 AMK43_RS07550 c708a41986da33039818eff4900b7626 474 PANTHER PTHR12994 6 437 9.5E-50 T 22-04-2016 AMK43_RS01705 c44c95ed320212e2f68a9203f3b7a0e8 473 Gene3D G3DSA:3.20.20.80 2 472 3.5E-147 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS01705 c44c95ed320212e2f68a9203f3b7a0e8 473 PANTHER PTHR10353 3 473 1.3E-278 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK43_RS01705 c44c95ed320212e2f68a9203f3b7a0e8 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 302 316 5.3E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK43_RS01705 c44c95ed320212e2f68a9203f3b7a0e8 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 409 426 5.3E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK43_RS01705 c44c95ed320212e2f68a9203f3b7a0e8 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 387 398 5.3E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK43_RS01705 c44c95ed320212e2f68a9203f3b7a0e8 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 366 374 5.3E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK43_RS01705 c44c95ed320212e2f68a9203f3b7a0e8 473 PRINTS PR00131 Glycosyl hydrolase family 1 signature 434 446 5.3E-17 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK43_RS01705 c44c95ed320212e2f68a9203f3b7a0e8 473 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 366 374 - T 22-04-2016 IPR018120 Glycoside hydrolase family 1, active site AMK43_RS01705 c44c95ed320212e2f68a9203f3b7a0e8 473 SUPERFAMILY SSF51445 2 470 2.43E-156 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS01705 c44c95ed320212e2f68a9203f3b7a0e8 473 PANTHER PTHR10353:SF74 3 473 1.3E-278 T 22-04-2016 AMK43_RS01705 c44c95ed320212e2f68a9203f3b7a0e8 473 Pfam PF00232 Glycosyl hydrolase family 1 3 469 6.1E-133 T 22-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 AMK43_RS01705 c44c95ed320212e2f68a9203f3b7a0e8 473 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 7 21 - T 22-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site AMK43_RS09060 32f4a5f13f8467e29b67ef5e1459f0f9 278 PANTHER PTHR32243 1 278 7.9E-92 T 22-04-2016 AMK43_RS09060 32f4a5f13f8467e29b67ef5e1459f0f9 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 272 4.7E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09060 32f4a5f13f8467e29b67ef5e1459f0f9 278 SUPERFAMILY SSF161098 10 278 2.09E-64 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09060 32f4a5f13f8467e29b67ef5e1459f0f9 278 Gene3D G3DSA:1.10.3720.10 2 264 3.0E-61 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00920 176e450e85de361016f7b42ec6517d83 118 Pfam PF16107 Domain of unknown function (DUF4825) 33 108 2.3E-14 T 22-04-2016 IPR032250 Domain of unknown function DUF4825 AMK43_RS02660 4b06f22987fc0647418ede65fd7156db 434 SUPERFAMILY SSF51445 74 339 5.29E-26 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS02660 4b06f22987fc0647418ede65fd7156db 434 PANTHER PTHR30032 241 359 2.9E-80 T 22-04-2016 AMK43_RS02660 4b06f22987fc0647418ede65fd7156db 434 PANTHER PTHR30032 44 219 2.9E-80 T 22-04-2016 AMK43_RS02660 4b06f22987fc0647418ede65fd7156db 434 Pfam PF02638 Glycosyl hydrolase-like 10 45 361 7.5E-101 T 22-04-2016 IPR003790 Glycosyl hydrolase-like 10 AMK43_RS02660 4b06f22987fc0647418ede65fd7156db 434 Gene3D G3DSA:3.20.20.80 124 268 5.6E-6 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS02660 4b06f22987fc0647418ede65fd7156db 434 PANTHER PTHR30032:SF2 241 359 2.9E-80 T 22-04-2016 AMK43_RS02660 4b06f22987fc0647418ede65fd7156db 434 PANTHER PTHR30032:SF2 44 219 2.9E-80 T 22-04-2016 AMK43_RS01275 2641f0427aa2eea95fa40a2a7996988c 121 SUPERFAMILY SSF46946 2 112 1.08E-45 T 22-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 AMK43_RS01275 2641f0427aa2eea95fa40a2a7996988c 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 8.5E-35 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01275 2641f0427aa2eea95fa40a2a7996988c 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 28.509 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01275 2641f0427aa2eea95fa40a2a7996988c 121 Gene3D G3DSA:1.10.8.50 2 70 2.2E-32 T 22-04-2016 AMK43_RS01275 2641f0427aa2eea95fa40a2a7996988c 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 22-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 AMK43_RS01275 2641f0427aa2eea95fa40a2a7996988c 121 PIRSF PIRSF002134 1 121 3.9E-43 T 22-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01275 2641f0427aa2eea95fa40a2a7996988c 121 PANTHER PTHR10871 1 121 1.2E-64 T 22-04-2016 AMK43_RS01275 2641f0427aa2eea95fa40a2a7996988c 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 5.5E-53 T 22-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS01275 2641f0427aa2eea95fa40a2a7996988c 121 Gene3D G3DSA:4.10.910.10 72 121 6.1E-25 T 22-04-2016 IPR027437 30s ribosomal protein S13, C-terminal AMK43_RS08170 862151cb5dfed6cdd398b5e413c00332 619 Pfam PF13687 Domain of unknown function (DUF4153) 168 387 8.5E-50 T 22-04-2016 IPR025291 Protein of unknown function DUF4153 AMK43_RS00080 c6a4becffbd346c2b200da23d5f64e59 228 SUPERFAMILY SSF50486 18 221 1.49E-53 T 22-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 AMK43_RS00080 c6a4becffbd346c2b200da23d5f64e59 228 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 19 214 1.2E-50 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 AMK43_RS00080 c6a4becffbd346c2b200da23d5f64e59 228 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 18 214 30.664 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 AMK43_RS00080 c6a4becffbd346c2b200da23d5f64e59 228 PANTHER PTHR10429 16 218 2.5E-60 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 AMK43_RS00080 c6a4becffbd346c2b200da23d5f64e59 228 Gene3D G3DSA:3.10.300.10 15 224 1.6E-63 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 AMK43_RS00080 c6a4becffbd346c2b200da23d5f64e59 228 PANTHER PTHR10429:SF0 16 218 2.5E-60 T 22-04-2016 AMK43_RS00080 c6a4becffbd346c2b200da23d5f64e59 228 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 20 211 4.5E-51 T 22-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 AMK43_RS03635 7ae11a7dcd331f565bc236b4bb497375 385 PANTHER PTHR11014 1 376 6.7E-29 T 22-04-2016 AMK43_RS03635 7ae11a7dcd331f565bc236b4bb497375 385 Gene3D G3DSA:3.40.630.10 289 375 1.3E-63 T 22-04-2016 AMK43_RS03635 7ae11a7dcd331f565bc236b4bb497375 385 Gene3D G3DSA:3.40.630.10 2 189 1.3E-63 T 22-04-2016 AMK43_RS03635 7ae11a7dcd331f565bc236b4bb497375 385 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 85 94 - T 22-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 AMK43_RS03635 7ae11a7dcd331f565bc236b4bb497375 385 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 15 203 8.9E-67 T 22-04-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- AMK43_RS03635 7ae11a7dcd331f565bc236b4bb497375 385 SUPERFAMILY SSF53187 290 373 1.01E-59 T 22-04-2016 AMK43_RS03635 7ae11a7dcd331f565bc236b4bb497375 385 SUPERFAMILY SSF53187 1 189 1.01E-59 T 22-04-2016 AMK43_RS03635 7ae11a7dcd331f565bc236b4bb497375 385 Pfam PF01546 Peptidase family M20/M25/M40 89 367 2.8E-29 T 22-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 AMK43_RS07145 737bcfe2349e1953407cf169905d2a12 189 SUPERFAMILY SSF53098 1 156 2.28E-47 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS07145 737bcfe2349e1953407cf169905d2a12 189 PANTHER PTHR30194 1 170 1.1E-63 T 22-04-2016 AMK43_RS07145 737bcfe2349e1953407cf169905d2a12 189 Gene3D G3DSA:3.30.420.10 1 156 5.6E-58 T 22-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 AMK43_RS07145 737bcfe2349e1953407cf169905d2a12 189 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 151 2.2E-49 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK43_RS07145 737bcfe2349e1953407cf169905d2a12 189 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 2.4E-29 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK43_RS07145 737bcfe2349e1953407cf169905d2a12 189 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 2.4E-29 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK43_RS07145 737bcfe2349e1953407cf169905d2a12 189 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 139 151 2.4E-29 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK43_RS07145 737bcfe2349e1953407cf169905d2a12 189 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 2.4E-29 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK43_RS07145 737bcfe2349e1953407cf169905d2a12 189 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 2.4E-29 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK43_RS07145 737bcfe2349e1953407cf169905d2a12 189 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 155 3.3E-43 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK43_RS07145 737bcfe2349e1953407cf169905d2a12 189 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 154 41.594 T 22-04-2016 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 AMK43_RS07230 0315efe565ab0d0f6500b7d8587d018c 182 PANTHER PTHR23091 17 178 7.6E-21 T 22-04-2016 AMK43_RS07230 0315efe565ab0d0f6500b7d8587d018c 182 SUPERFAMILY SSF55729 16 180 1.46E-32 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS07230 0315efe565ab0d0f6500b7d8587d018c 182 Pfam PF13420 Acetyltransferase (GNAT) domain 18 176 2.2E-18 T 22-04-2016 AMK43_RS07230 0315efe565ab0d0f6500b7d8587d018c 182 Gene3D G3DSA:3.40.630.30 16 181 1.3E-37 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS00710 d41286cf70c9d90029a09de54ee6811e 106 Pfam PF04993 TfoX N-terminal domain 13 93 5.1E-8 T 22-04-2016 IPR007076 TfoX, N-terminal AMK43_RS00710 d41286cf70c9d90029a09de54ee6811e 106 Gene3D G3DSA:3.30.1460.30 5 65 6.9E-8 T 22-04-2016 IPR007076 TfoX, N-terminal AMK43_RS00710 d41286cf70c9d90029a09de54ee6811e 106 SUPERFAMILY SSF159894 5 97 7.06E-18 T 22-04-2016 AMK43_RS04090 8c243664902f8d48f186eeea51c4f9bf 154 Gene3D G3DSA:3.40.390.30 5 152 4.7E-42 T 22-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 AMK43_RS04090 8c243664902f8d48f186eeea51c4f9bf 154 PANTHER PTHR22881 45 154 3.0E-40 T 22-04-2016 AMK43_RS04090 8c243664902f8d48f186eeea51c4f9bf 154 Pfam PF02130 Uncharacterized protein family UPF0054 30 149 4.7E-41 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMK43_RS04090 8c243664902f8d48f186eeea51c4f9bf 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 119 129 - T 22-04-2016 IPR020549 Endoribonuclease YbeY, conserved site AMK43_RS04090 8c243664902f8d48f186eeea51c4f9bf 154 SUPERFAMILY SSF55486 35 153 1.06E-41 T 22-04-2016 AMK43_RS04090 8c243664902f8d48f186eeea51c4f9bf 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 7 153 22.319 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMK43_RS04090 8c243664902f8d48f186eeea51c4f9bf 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 45 149 6.3E-39 T 22-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 AMK43_RS04570 97b774aeb86c47031d96fe0cd2bc7949 240 PANTHER PTHR11907:SF9 35 191 2.3E-28 T 22-04-2016 AMK43_RS04570 97b774aeb86c47031d96fe0cd2bc7949 240 PANTHER PTHR11907 35 191 2.3E-28 T 22-04-2016 AMK43_RS04570 97b774aeb86c47031d96fe0cd2bc7949 240 Pfam PF00156 Phosphoribosyl transferase domain 83 193 1.4E-6 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK43_RS04570 97b774aeb86c47031d96fe0cd2bc7949 240 Gene3D G3DSA:3.40.50.2020 42 195 2.0E-23 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS04570 97b774aeb86c47031d96fe0cd2bc7949 240 SUPERFAMILY SSF53271 52 194 5.25E-19 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS10685 21530bf26e3bbbfef28f5712f6addc9d 153 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 1 147 18.242 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame AMK43_RS10685 21530bf26e3bbbfef28f5712f6addc9d 153 PANTHER PTHR38452 1 151 1.6E-46 T 22-04-2016 AMK43_RS10685 21530bf26e3bbbfef28f5712f6addc9d 153 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 5 129 1.0E-34 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame AMK43_RS10685 21530bf26e3bbbfef28f5712f6addc9d 153 PANTHER PTHR38452:SF1 1 151 1.6E-46 T 22-04-2016 AMK43_RS10685 21530bf26e3bbbfef28f5712f6addc9d 153 Pfam PF04284 Protein of unknown function (DUF441) 5 144 5.2E-49 T 22-04-2016 IPR007382 Uncharacterised protein family UPF0756, transmembrame AMK43_RS00575 181b5f216c37c04357d067d20bdffeb4 488 SMART SM00927 61 165 1.2E-14 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AMK43_RS00575 181b5f216c37c04357d067d20bdffeb4 488 Gene3D G3DSA:3.40.600.10 249 482 6.6E-58 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AMK43_RS00575 181b5f216c37c04357d067d20bdffeb4 488 Gene3D G3DSA:3.40.600.10 2 233 1.5E-63 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AMK43_RS00575 181b5f216c37c04357d067d20bdffeb4 488 SUPERFAMILY SSF52980 249 482 2.95E-37 T 22-04-2016 IPR011335 Restriction endonuclease type II-like AMK43_RS00575 181b5f216c37c04357d067d20bdffeb4 488 Pfam PF02976 DNA mismatch repair enzyme MutH 59 165 4.2E-27 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AMK43_RS00575 181b5f216c37c04357d067d20bdffeb4 488 Pfam PF02976 DNA mismatch repair enzyme MutH 295 384 1.7E-7 T 22-04-2016 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 AMK43_RS00575 181b5f216c37c04357d067d20bdffeb4 488 SUPERFAMILY SSF52980 5 232 1.66E-43 T 22-04-2016 IPR011335 Restriction endonuclease type II-like AMK43_RS00160 dfc22302795e3b7e1c183c2b5f0bc0c4 297 Gene3D G3DSA:3.40.50.300 2 227 2.4E-62 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00160 dfc22302795e3b7e1c183c2b5f0bc0c4 297 PANTHER PTHR24220 4 236 1.7E-86 T 22-04-2016 AMK43_RS00160 dfc22302795e3b7e1c183c2b5f0bc0c4 297 SUPERFAMILY SSF52540 15 217 1.74E-54 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS00160 dfc22302795e3b7e1c183c2b5f0bc0c4 297 Pfam PF00005 ABC transporter 20 164 2.6E-33 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS00160 dfc22302795e3b7e1c183c2b5f0bc0c4 297 SMART SM00382 28 212 7.1E-11 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS00160 dfc22302795e3b7e1c183c2b5f0bc0c4 297 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS00160 dfc22302795e3b7e1c183c2b5f0bc0c4 297 PANTHER PTHR24220:SF331 4 236 1.7E-86 T 22-04-2016 AMK43_RS10030 455f4a7308924f6f28fe2a730ca2287e 157 SUPERFAMILY SSF52833 28 156 4.8E-22 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS10030 455f4a7308924f6f28fe2a730ca2287e 157 Gene3D G3DSA:3.40.30.10 24 157 5.8E-28 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS10030 455f4a7308924f6f28fe2a730ca2287e 157 PANTHER PTHR10681 27 150 3.5E-18 T 22-04-2016 AMK43_RS10030 455f4a7308924f6f28fe2a730ca2287e 157 Pfam PF08534 Redoxin 29 148 2.8E-12 T 22-04-2016 IPR013740 Redoxin GO:0016491 AMK43_RS10030 455f4a7308924f6f28fe2a730ca2287e 157 PANTHER PTHR10681:SF68 27 150 3.5E-18 T 22-04-2016 AMK43_RS01845 cb02505c628a0c8e972386a8f29db9bd 339 SUPERFAMILY SSF111369 47 264 1.07E-19 T 22-04-2016 AMK43_RS01845 cb02505c628a0c8e972386a8f29db9bd 339 PANTHER PTHR30469:SF15 1 336 4.9E-57 T 22-04-2016 AMK43_RS01845 cb02505c628a0c8e972386a8f29db9bd 339 Gene3D G3DSA:2.40.50.100 63 91 7.0E-10 T 22-04-2016 AMK43_RS01845 cb02505c628a0c8e972386a8f29db9bd 339 Gene3D G3DSA:2.40.50.100 152 185 7.0E-10 T 22-04-2016 AMK43_RS01845 cb02505c628a0c8e972386a8f29db9bd 339 PANTHER PTHR30469 1 336 4.9E-57 T 22-04-2016 AMK43_RS01845 cb02505c628a0c8e972386a8f29db9bd 339 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 256 2.0E-18 T 22-04-2016 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain AMK43_RS01845 cb02505c628a0c8e972386a8f29db9bd 339 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 336 2.2E-56 T 22-04-2016 IPR006143 RND efflux pump, membrane fusion protein GO:0016020|GO:0055085 AMK43_RS09675 6086e523943554d70ade4d6acc98357d 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 267 5.0E-10 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09675 6086e523943554d70ade4d6acc98357d 286 SUPERFAMILY SSF161098 15 265 1.96E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09675 6086e523943554d70ade4d6acc98357d 286 Gene3D G3DSA:1.10.3720.10 56 269 1.7E-25 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09675 6086e523943554d70ade4d6acc98357d 286 PANTHER PTHR30425 3 280 2.0E-55 T 22-04-2016 AMK43_RS08275 72272e03da5dba00ff7e4472104ffad7 92 Pfam PF09827 CRISPR associated protein Cas2 1 76 5.8E-20 T 22-04-2016 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 AMK43_RS08275 72272e03da5dba00ff7e4472104ffad7 92 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 92 14.759 T 22-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 AMK43_RS08275 72272e03da5dba00ff7e4472104ffad7 92 SUPERFAMILY SSF143430 1 85 1.44E-23 T 22-04-2016 AMK43_RS08275 72272e03da5dba00ff7e4472104ffad7 92 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 83 4.1E-14 T 22-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 AMK43_RS08275 72272e03da5dba00ff7e4472104ffad7 92 PANTHER PTHR34405 1 90 4.0E-21 T 22-04-2016 AMK43_RS08275 72272e03da5dba00ff7e4472104ffad7 92 PANTHER PTHR34405:SF1 1 90 4.0E-21 T 22-04-2016 AMK43_RS08275 72272e03da5dba00ff7e4472104ffad7 92 Gene3D G3DSA:3.30.70.240 1 69 1.5E-23 T 22-04-2016 IPR000640 Translation elongation factor EFG, V domain AMK43_RS00125 5a1e4de06b637148f28fa407b2eaeba4 372 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 20 366 4.9E-147 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AMK43_RS00125 5a1e4de06b637148f28fa407b2eaeba4 372 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 19 370 1.1E-160 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AMK43_RS00125 5a1e4de06b637148f28fa407b2eaeba4 372 PANTHER PTHR35806 1 372 3.5E-183 T 22-04-2016 AMK43_RS00125 5a1e4de06b637148f28fa407b2eaeba4 372 PIRSF PIRSF015658 1 372 8.0E-169 T 22-04-2016 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AMK43_RS03515 d7a65c3114a3d282975cdb4ef89402ba 65 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 2 61 6.5E-21 T 22-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 AMK43_RS03610 b1fc62ed9980c1d3c0711f5bf8abbde8 449 Pfam PF02378 Phosphotransferase system, EIIC 26 354 6.8E-57 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMK43_RS03610 b1fc62ed9980c1d3c0711f5bf8abbde8 449 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 11 427 1.9E-116 T 22-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 AMK43_RS03610 b1fc62ed9980c1d3c0711f5bf8abbde8 449 PANTHER PTHR33989 1 446 2.0E-138 T 22-04-2016 AMK43_RS03610 b1fc62ed9980c1d3c0711f5bf8abbde8 449 PIRSF PIRSF006351 1 436 4.9E-131 T 22-04-2016 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 AMK43_RS01075 c78fe817253fe72526bec751db3160b3 352 PANTHER PTHR30505:SF1 5 352 3.7E-143 T 22-04-2016 AMK43_RS01075 c78fe817253fe72526bec751db3160b3 352 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 8 328 1.7E-90 T 22-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 AMK43_RS01075 c78fe817253fe72526bec751db3160b3 352 PANTHER PTHR30505 5 352 3.7E-143 T 22-04-2016 AMK43_RS01075 c78fe817253fe72526bec751db3160b3 352 Pfam PF02378 Phosphotransferase system, EIIC 14 274 7.9E-14 T 22-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 AMK43_RS07325 6b8b65023caf89db692cabe5dc49a725 293 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 8 289 35.986 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 AMK43_RS07325 6b8b65023caf89db692cabe5dc49a725 293 SUPERFAMILY SSF52540 9 162 1.39E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07325 6b8b65023caf89db692cabe5dc49a725 293 PANTHER PTHR30448 1 287 9.0E-113 T 22-04-2016 AMK43_RS07325 6b8b65023caf89db692cabe5dc49a725 293 PANTHER PTHR30448:SF0 1 287 9.0E-113 T 22-04-2016 AMK43_RS07325 6b8b65023caf89db692cabe5dc49a725 293 Gene3D G3DSA:3.40.50.300 9 159 1.5E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07325 6b8b65023caf89db692cabe5dc49a725 293 PIRSF PIRSF005052 8 292 4.9E-97 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 AMK43_RS07325 6b8b65023caf89db692cabe5dc49a725 293 Pfam PF03668 P-loop ATPase protein family 9 288 7.6E-85 T 22-04-2016 IPR005337 RapZ-like family GO:0005524 AMK43_RS01160 c737a068627593708b39041ac265e8b1 535 Pfam PF13644 DKNYY family 210 269 1.9E-11 T 22-04-2016 IPR027375 DKNYY family AMK43_RS01160 c737a068627593708b39041ac265e8b1 535 Pfam PF13644 DKNYY family 30 132 9.2E-19 T 22-04-2016 IPR027375 DKNYY family AMK43_RS01160 c737a068627593708b39041ac265e8b1 535 Pfam PF13644 DKNYY family 259 402 1.4E-23 T 22-04-2016 IPR027375 DKNYY family AMK43_RS01160 c737a068627593708b39041ac265e8b1 535 Pfam PF13644 DKNYY family 60 210 2.6E-27 T 22-04-2016 IPR027375 DKNYY family AMK43_RS01160 c737a068627593708b39041ac265e8b1 535 SUPERFAMILY SSF51004 249 482 3.23E-6 T 22-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain AMK43_RS03045 979ab6a027f01ec428760515698ae1cf 175 PANTHER PTHR33567 4 175 2.1E-59 T 22-04-2016 AMK43_RS03045 979ab6a027f01ec428760515698ae1cf 175 Pfam PF02417 Chromate transporter 5 172 2.1E-50 T 22-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 AMK43_RS01690 106600ed4c619195ee6af26b25e3cb6c 108 PIRSF PIRSF000699 1 108 4.8E-38 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS01690 106600ed4c619195ee6af26b25e3cb6c 108 SUPERFAMILY SSF46973 5 103 4.18E-37 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS01690 106600ed4c619195ee6af26b25e3cb6c 108 Gene3D G3DSA:1.20.58.80 6 105 1.7E-39 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS01690 106600ed4c619195ee6af26b25e3cb6c 108 PANTHER PTHR34382 1 108 8.1E-38 T 22-04-2016 AMK43_RS01690 106600ed4c619195ee6af26b25e3cb6c 108 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 10 102 5.6E-36 T 22-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS01690 106600ed4c619195ee6af26b25e3cb6c 108 PANTHER PTHR34382:SF2 1 108 8.1E-38 T 22-04-2016 AMK43_RS01545 9a05f38bb78b026398d1e9b815236d34 157 SUPERFAMILY SSF52833 30 107 7.06E-12 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS01545 9a05f38bb78b026398d1e9b815236d34 157 Gene3D G3DSA:3.40.30.10 3 154 2.3E-26 T 22-04-2016 IPR012336 Thioredoxin-like fold AMK43_RS01545 9a05f38bb78b026398d1e9b815236d34 157 Pfam PF14595 Thioredoxin 1 124 1.7E-27 T 22-04-2016 AMK43_RS07050 1ff172978688f12071921cf10699f55d 232 Pfam PF02390 Putative methyltransferase 58 222 2.9E-38 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 AMK43_RS07050 1ff172978688f12071921cf10699f55d 232 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 45 221 7.6E-42 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 AMK43_RS07050 1ff172978688f12071921cf10699f55d 232 PANTHER PTHR23417 20 232 2.3E-57 T 22-04-2016 AMK43_RS07050 1ff172978688f12071921cf10699f55d 232 Gene3D G3DSA:3.40.50.150 57 209 4.3E-15 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07050 1ff172978688f12071921cf10699f55d 232 PANTHER PTHR23417:SF14 20 232 2.3E-57 T 22-04-2016 AMK43_RS07050 1ff172978688f12071921cf10699f55d 232 SUPERFAMILY SSF53335 41 219 5.58E-25 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07050 1ff172978688f12071921cf10699f55d 232 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 15 232 22.226 T 22-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 AMK43_RS07215 7297c700a8cf7eaf60ae41d8c8f9fdb0 241 Gene3D G3DSA:3.40.50.150 18 142 8.8E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07215 7297c700a8cf7eaf60ae41d8c8f9fdb0 241 Gene3D G3DSA:3.40.50.150 191 224 8.8E-35 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07215 7297c700a8cf7eaf60ae41d8c8f9fdb0 241 SUPERFAMILY SSF53335 5 226 2.07E-39 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS07215 7297c700a8cf7eaf60ae41d8c8f9fdb0 241 Pfam PF13649 Methyltransferase domain 35 133 4.6E-17 T 22-04-2016 AMK43_RS07215 7297c700a8cf7eaf60ae41d8c8f9fdb0 241 PANTHER PTHR10108:SF705 178 220 1.5E-20 T 22-04-2016 AMK43_RS07215 7297c700a8cf7eaf60ae41d8c8f9fdb0 241 PANTHER PTHR10108:SF705 21 146 1.5E-20 T 22-04-2016 AMK43_RS07215 7297c700a8cf7eaf60ae41d8c8f9fdb0 241 PANTHER PTHR10108 178 220 1.5E-20 T 22-04-2016 AMK43_RS07215 7297c700a8cf7eaf60ae41d8c8f9fdb0 241 PANTHER PTHR10108 21 146 1.5E-20 T 22-04-2016 AMK43_RS11010 a80228ff71d818a93935d16de5f82540 234 Pfam PF02361 Cobalt transport protein 5 197 8.2E-14 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component AMK43_RS11010 a80228ff71d818a93935d16de5f82540 234 PANTHER PTHR33514 7 234 5.8E-24 T 22-04-2016 AMK43_RS10705 3220471cb52b0d88dc52c917ff18aebd 468 TIGRFAM TIGR03955 rSAM_HydG: [FeFe] hydrogenase H-cluster radical SAM maturase HydG 13 466 4.0E-181 T 22-04-2016 IPR024007 [FeFe]-hydrogenase maturation HydG, radical SAM AMK43_RS10705 3220471cb52b0d88dc52c917ff18aebd 468 PANTHER PTHR22976 4 413 7.4E-211 T 22-04-2016 AMK43_RS10705 3220471cb52b0d88dc52c917ff18aebd 468 Gene3D G3DSA:3.20.20.70 45 380 1.6E-48 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS10705 3220471cb52b0d88dc52c917ff18aebd 468 PANTHER PTHR22976:SF2 4 413 7.4E-211 T 22-04-2016 AMK43_RS10705 3220471cb52b0d88dc52c917ff18aebd 468 SUPERFAMILY SSF102114 48 373 1.7E-51 T 22-04-2016 AMK43_RS10705 3220471cb52b0d88dc52c917ff18aebd 468 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 272 377 6.3E-26 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 AMK43_RS10705 3220471cb52b0d88dc52c917ff18aebd 468 SMART SM00876 272 379 1.2E-31 T 22-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 AMK43_RS10705 3220471cb52b0d88dc52c917ff18aebd 468 Pfam PF04055 Radical SAM superfamily 90 238 8.7E-11 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS08865 f0e3e7e4b077fe3b3f077962d85df914 202 Pfam PF09972 Predicted membrane protein (DUF2207) 31 194 2.3E-26 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane AMK43_RS00745 3da2b696272053409cb4d37c991b88a3 390 PANTHER PTHR11751:SF338 3 113 1.2E-114 T 22-04-2016 AMK43_RS00745 3da2b696272053409cb4d37c991b88a3 390 PANTHER PTHR11751:SF338 139 388 1.2E-114 T 22-04-2016 AMK43_RS00745 3da2b696272053409cb4d37c991b88a3 390 Gene3D G3DSA:3.40.640.10 33 278 3.2E-65 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS00745 3da2b696272053409cb4d37c991b88a3 390 SUPERFAMILY SSF53383 8 385 5.78E-67 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS00745 3da2b696272053409cb4d37c991b88a3 390 Pfam PF00155 Aminotransferase class I and II 138 382 1.6E-33 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK43_RS00745 3da2b696272053409cb4d37c991b88a3 390 Pfam PF00155 Aminotransferase class I and II 19 112 6.7E-7 T 22-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 AMK43_RS00745 3da2b696272053409cb4d37c991b88a3 390 PANTHER PTHR11751 3 113 1.2E-114 T 22-04-2016 AMK43_RS00745 3da2b696272053409cb4d37c991b88a3 390 PANTHER PTHR11751 139 388 1.2E-114 T 22-04-2016 AMK43_RS00745 3da2b696272053409cb4d37c991b88a3 390 Gene3D G3DSA:3.90.1150.10 279 386 1.3E-30 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS08895 0d262737662a6b22c57daa402faa0408 200 SUPERFAMILY SSF52540 1 198 2.17E-32 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08895 0d262737662a6b22c57daa402faa0408 200 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 2 190 2.3E-50 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AMK43_RS08895 0d262737662a6b22c57daa402faa0408 200 Pfam PF01121 Dephospho-CoA kinase 1 184 2.4E-50 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AMK43_RS08895 0d262737662a6b22c57daa402faa0408 200 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 197 22.387 T 22-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 AMK43_RS08895 0d262737662a6b22c57daa402faa0408 200 PANTHER PTHR10695 2 198 3.0E-59 T 22-04-2016 AMK43_RS08895 0d262737662a6b22c57daa402faa0408 200 Gene3D G3DSA:3.40.50.300 1 198 1.7E-61 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11375 f165d93707155380ecb392e07b5c39d4 285 PANTHER PTHR21579:SF15 9 266 2.5E-73 T 22-04-2016 AMK43_RS11375 f165d93707155380ecb392e07b5c39d4 285 PANTHER PTHR21579 9 266 2.5E-73 T 22-04-2016 AMK43_RS11375 f165d93707155380ecb392e07b5c39d4 285 Pfam PF09612 Bacterial protein of unknown function (HtrL_YibB) 9 269 1.3E-92 T 22-04-2016 IPR011735 HtrL protein AMK43_RS06300 43a4e311d6433e20958f0ac562bfed0d 123 PANTHER PTHR37297:SF1 1 122 1.7E-31 T 22-04-2016 AMK43_RS06300 43a4e311d6433e20958f0ac562bfed0d 123 Gene3D G3DSA:3.40.50.360 1 121 2.0E-32 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS06300 43a4e311d6433e20958f0ac562bfed0d 123 Pfam PF07972 NrdI Flavodoxin like 3 115 3.9E-27 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI AMK43_RS06300 43a4e311d6433e20958f0ac562bfed0d 123 TIGRFAM TIGR00333 nrdI: nrdI protein 3 115 8.4E-31 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI AMK43_RS06300 43a4e311d6433e20958f0ac562bfed0d 123 PIRSF PIRSF005087 1 123 3.7E-32 T 22-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI AMK43_RS06300 43a4e311d6433e20958f0ac562bfed0d 123 PANTHER PTHR37297 1 122 1.7E-31 T 22-04-2016 AMK43_RS06300 43a4e311d6433e20958f0ac562bfed0d 123 SUPERFAMILY SSF52218 2 121 5.5E-17 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS09745 f5d9b2e2fcb45376c01b395d6f081b5d 103 Pfam PF04723 Glycine reductase complex selenoprotein A 1 101 5.3E-50 T 22-04-2016 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 AMK43_RS09745 f5d9b2e2fcb45376c01b395d6f081b5d 103 PIRSF PIRSF000181 1 103 1.8E-50 T 22-04-2016 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 AMK43_RS11270 962109c7c57706027e38d78b9aa655a7 247 SUPERFAMILY SSF53448 4 243 4.99E-19 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11270 962109c7c57706027e38d78b9aa655a7 247 Pfam PF00535 Glycosyl transferase family 2 6 148 1.4E-10 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK43_RS11270 962109c7c57706027e38d78b9aa655a7 247 Gene3D G3DSA:3.90.550.10 4 211 3.5E-11 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS00350 f7072c5f0e8bd646eec5aa3d8a869fa2 159 SUPERFAMILY SSF54518 2 154 6.28E-32 T 22-04-2016 IPR025659 Tubby C-terminal-like domain AMK43_RS00350 f7072c5f0e8bd646eec5aa3d8a869fa2 159 Pfam PF04525 LURP-one-related 3 149 6.1E-13 T 22-04-2016 IPR007612 LURP1-related protein domain AMK43_RS00350 f7072c5f0e8bd646eec5aa3d8a869fa2 159 PANTHER PTHR31087:SF9 7 159 4.6E-35 T 22-04-2016 AMK43_RS00350 f7072c5f0e8bd646eec5aa3d8a869fa2 159 PANTHER PTHR31087 7 159 4.6E-35 T 22-04-2016 AMK43_RS08995 a6c66affcf97b66a833a8d6169154338 232 Pfam PF01551 Peptidase family M23 105 199 6.4E-28 T 22-04-2016 IPR016047 Peptidase M23 AMK43_RS08995 a6c66affcf97b66a833a8d6169154338 232 PANTHER PTHR21666 6 213 1.6E-42 T 22-04-2016 AMK43_RS08995 a6c66affcf97b66a833a8d6169154338 232 Gene3D G3DSA:2.70.70.10 77 204 7.7E-43 T 22-04-2016 AMK43_RS08995 a6c66affcf97b66a833a8d6169154338 232 SUPERFAMILY SSF51261 28 203 3.14E-48 T 22-04-2016 IPR011055 Duplicated hybrid motif AMK43_RS09825 30a5423d18873d265a8671e6b1c81f6b 266 Pfam PF04909 Amidohydrolase 77 264 7.9E-15 T 22-04-2016 IPR006680 Amidohydrolase-related GO:0016787 AMK43_RS09825 30a5423d18873d265a8671e6b1c81f6b 266 SUPERFAMILY SSF51556 77 264 8.08E-32 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK43_RS09825 30a5423d18873d265a8671e6b1c81f6b 266 SUPERFAMILY SSF51556 1 50 8.08E-32 T 22-04-2016 IPR032466 Metal-dependent hydrolase AMK43_RS09825 30a5423d18873d265a8671e6b1c81f6b 266 Gene3D G3DSA:3.20.20.140 1 266 3.7E-61 T 22-04-2016 AMK43_RS07945 88ed84e0e5bb4618c583bec8e73d49a6 791 Gene3D G3DSA:2.60.450.10 520 608 7.1E-9 T 22-04-2016 AMK43_RS07945 88ed84e0e5bb4618c583bec8e73d49a6 791 Gene3D G3DSA:2.60.450.10 198 312 1.1E-20 T 22-04-2016 AMK43_RS07945 88ed84e0e5bb4618c583bec8e73d49a6 791 Pfam PF03968 OstA-like protein 175 274 1.4E-4 T 22-04-2016 IPR005653 Organic solvent tolerance-like, N-terminal AMK43_RS10610 c16f0a8605c8042ae2ee879aa8674f18 564 Pfam PF01432 Peptidase family M3 309 545 4.6E-22 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 AMK43_RS10610 c16f0a8605c8042ae2ee879aa8674f18 564 Pfam PF01432 Peptidase family M3 165 268 2.3E-6 T 22-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 AMK43_RS10610 c16f0a8605c8042ae2ee879aa8674f18 564 Gene3D G3DSA:1.10.1370.10 97 258 1.4E-10 T 22-04-2016 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 AMK43_RS10610 c16f0a8605c8042ae2ee879aa8674f18 564 PANTHER PTHR11804:SF28 149 564 1.9E-221 T 22-04-2016 AMK43_RS10610 c16f0a8605c8042ae2ee879aa8674f18 564 PANTHER PTHR11804:SF28 1 125 1.9E-221 T 22-04-2016 AMK43_RS10610 c16f0a8605c8042ae2ee879aa8674f18 564 PANTHER PTHR11804 149 564 1.9E-221 T 22-04-2016 AMK43_RS10610 c16f0a8605c8042ae2ee879aa8674f18 564 PANTHER PTHR11804 1 125 1.9E-221 T 22-04-2016 AMK43_RS10610 c16f0a8605c8042ae2ee879aa8674f18 564 SUPERFAMILY SSF55486 33 558 9.52E-127 T 22-04-2016 AMK43_RS10610 c16f0a8605c8042ae2ee879aa8674f18 564 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 14 560 1.3E-221 T 22-04-2016 IPR011976 Peptidase M3B, oligoendopeptidase-related clade 2 AMK43_RS07120 a9a239e2380b938159485449d64580b5 214 ProDom PD032436 LIPOPROTEIN UNCHARACTERIZED PROBABLE CJ0457C SIMILAR TRANSFERASE BACTERIA PRECURSOR SIGNAL CC0304 3 121 1.0E-19 T 22-04-2016 IPR007172 Domain of unknown function DUF374 AMK43_RS07120 a9a239e2380b938159485449d64580b5 214 Pfam PF04028 Domain of unknown function (DUF374) 61 121 1.7E-18 T 22-04-2016 IPR007172 Domain of unknown function DUF374 AMK43_RS07120 a9a239e2380b938159485449d64580b5 214 SUPERFAMILY SSF69593 74 198 2.48E-10 T 22-04-2016 AMK43_RS10330 edbf8e1b713aea30b13d1eb9ddf1d0c4 122 Gene3D G3DSA:2.40.128.20 3 118 2.6E-9 T 22-04-2016 IPR012674 Calycin AMK43_RS10330 edbf8e1b713aea30b13d1eb9ddf1d0c4 122 Pfam PF09148 Domain of unknown function (DUF1934) 41 118 5.9E-9 T 22-04-2016 IPR015231 Protein of unknown function DUF1934 AMK43_RS10330 edbf8e1b713aea30b13d1eb9ddf1d0c4 122 SUPERFAMILY SSF50814 32 118 2.8E-7 T 22-04-2016 IPR011038 Calycin-like AMK43_RS06000 66d6e84410c4c821bcf7b241ea1e2833 533 SUPERFAMILY SSF56024 64 163 5.18E-12 T 22-04-2016 AMK43_RS06000 66d6e84410c4c821bcf7b241ea1e2833 533 SUPERFAMILY SSF56024 204 257 5.18E-12 T 22-04-2016 AMK43_RS06000 66d6e84410c4c821bcf7b241ea1e2833 533 Pfam PF13091 PLD-like domain 362 497 8.5E-20 T 22-04-2016 IPR025202 Phospholipase D-like domain AMK43_RS06000 66d6e84410c4c821bcf7b241ea1e2833 533 Gene3D G3DSA:3.30.870.10 209 256 3.2E-10 T 22-04-2016 AMK43_RS06000 66d6e84410c4c821bcf7b241ea1e2833 533 Gene3D G3DSA:3.30.870.10 64 157 3.2E-10 T 22-04-2016 AMK43_RS06000 66d6e84410c4c821bcf7b241ea1e2833 533 Gene3D G3DSA:3.30.870.10 363 500 1.1E-13 T 22-04-2016 AMK43_RS06000 66d6e84410c4c821bcf7b241ea1e2833 533 SUPERFAMILY SSF56024 366 499 2.24E-12 T 22-04-2016 AMK43_RS07490 7a83a565ef58b24503b711b31f37403a 168 SUPERFAMILY SSF52218 25 167 2.17E-13 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS07490 7a83a565ef58b24503b711b31f37403a 168 PANTHER PTHR39201:SF1 3 168 4.3E-38 T 22-04-2016 AMK43_RS07490 7a83a565ef58b24503b711b31f37403a 168 Gene3D G3DSA:3.40.50.360 5 168 1.9E-14 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS07490 7a83a565ef58b24503b711b31f37403a 168 Pfam PF12682 Flavodoxin 26 168 2.8E-23 T 22-04-2016 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 AMK43_RS07490 7a83a565ef58b24503b711b31f37403a 168 PANTHER PTHR39201 3 168 4.3E-38 T 22-04-2016 AMK43_RS09070 875b4770c72a1a30ba209505e2979c34 435 PANTHER PTHR30061 4 434 3.6E-37 T 22-04-2016 AMK43_RS09070 875b4770c72a1a30ba209505e2979c34 435 SUPERFAMILY SSF53850 16 433 2.28E-56 T 22-04-2016 AMK43_RS09070 875b4770c72a1a30ba209505e2979c34 435 Gene3D G3DSA:3.40.190.10 35 150 7.7E-25 T 22-04-2016 AMK43_RS09070 875b4770c72a1a30ba209505e2979c34 435 Gene3D G3DSA:3.40.190.10 152 347 2.4E-16 T 22-04-2016 AMK43_RS09070 875b4770c72a1a30ba209505e2979c34 435 Pfam PF01547 Bacterial extracellular solute-binding protein 56 346 2.8E-29 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 AMK43_RS04145 a22cf3fe30680c50302b017b76222e5e 186 Pfam PF03358 NADPH-dependent FMN reductase 5 146 9.8E-33 T 22-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 AMK43_RS04145 a22cf3fe30680c50302b017b76222e5e 186 Gene3D G3DSA:3.40.50.360 1 184 1.7E-41 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS04145 a22cf3fe30680c50302b017b76222e5e 186 SUPERFAMILY SSF52218 4 180 7.33E-36 T 22-04-2016 IPR029039 Flavoprotein-like domain AMK43_RS04145 a22cf3fe30680c50302b017b76222e5e 186 PANTHER PTHR30543:SF6 1 184 1.9E-39 T 22-04-2016 AMK43_RS04145 a22cf3fe30680c50302b017b76222e5e 186 PANTHER PTHR30543 1 184 1.9E-39 T 22-04-2016 AMK43_RS09830 5d1ad0feb0ddebcdc79ec89530323474 110 Pfam PF01638 HxlR-like helix-turn-helix 19 108 7.8E-34 T 22-04-2016 IPR002577 Helix-turn-helix, HxlR type AMK43_RS09830 5d1ad0feb0ddebcdc79ec89530323474 110 Gene3D G3DSA:1.10.10.10 8 109 3.4E-40 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09830 5d1ad0feb0ddebcdc79ec89530323474 110 PANTHER PTHR33204 1 106 1.0E-38 T 22-04-2016 AMK43_RS09830 5d1ad0feb0ddebcdc79ec89530323474 110 SUPERFAMILY SSF46785 9 108 7.08E-33 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS07970 fa99a9467471e41c1fd6eaa276fb4370 336 PANTHER PTHR21371 8 336 1.2E-187 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK43_RS07970 fa99a9467471e41c1fd6eaa276fb4370 336 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 21 184 2.1E-76 T 22-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK43_RS07970 fa99a9467471e41c1fd6eaa276fb4370 336 SUPERFAMILY SSF48179 190 334 6.63E-66 T 22-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 AMK43_RS07970 fa99a9467471e41c1fd6eaa276fb4370 336 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 21 334 6.4E-135 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK43_RS07970 fa99a9467471e41c1fd6eaa276fb4370 336 Gene3D G3DSA:1.10.1040.10 46 332 2.0E-115 T 22-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 AMK43_RS07970 fa99a9467471e41c1fd6eaa276fb4370 336 SUPERFAMILY SSF51735 9 189 3.95E-75 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS07970 fa99a9467471e41c1fd6eaa276fb4370 336 Gene3D G3DSA:3.50.50.60 7 45 4.1E-5 T 22-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 AMK43_RS07970 fa99a9467471e41c1fd6eaa276fb4370 336 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 8 335 44.452 T 22-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK43_RS07970 fa99a9467471e41c1fd6eaa276fb4370 336 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 190 333 3.8E-62 T 22-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 AMK43_RS08620 15e76de674535a34a1862b4a5e778560 307 Gene3D G3DSA:3.40.50.1220 98 140 2.3E-8 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK43_RS08620 15e76de674535a34a1862b4a5e778560 307 Gene3D G3DSA:3.40.50.1220 17 43 2.3E-8 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK43_RS08620 15e76de674535a34a1862b4a5e778560 307 Gene3D G3DSA:3.40.50.1220 228 306 2.3E-8 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK43_RS08620 15e76de674535a34a1862b4a5e778560 307 SUPERFAMILY SSF52467 183 305 5.14E-37 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK43_RS08620 15e76de674535a34a1862b4a5e778560 307 SUPERFAMILY SSF52467 13 156 5.14E-37 T 22-04-2016 IPR029035 DHS-like NAD/FAD-binding domain AMK43_RS02680 fa68e24d92ef2876ca6b0a2cf1aae0ef 202 Pfam PF14024 Protein of unknown function (DUF4240) 5 132 1.2E-31 T 22-04-2016 IPR025334 Domain of unknown function (DUF4240 AMK43_RS00420 a97953f1f970d10fce6ecb75c2f78888 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 51 75 - T 22-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 AMK43_RS00420 a97953f1f970d10fce6ecb75c2f78888 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 88 9.3E-46 T 22-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 AMK43_RS00420 a97953f1f970d10fce6ecb75c2f78888 92 PRINTS PR00975 Ribosomal protein S19 family signature 31 50 4.4E-26 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00420 a97953f1f970d10fce6ecb75c2f78888 92 PRINTS PR00975 Ribosomal protein S19 family signature 51 63 4.4E-26 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00420 a97953f1f970d10fce6ecb75c2f78888 92 PRINTS PR00975 Ribosomal protein S19 family signature 63 78 4.4E-26 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00420 a97953f1f970d10fce6ecb75c2f78888 92 Pfam PF00203 Ribosomal protein S19 3 81 5.9E-38 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00420 a97953f1f970d10fce6ecb75c2f78888 92 PIRSF PIRSF002144 1 92 4.3E-35 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00420 a97953f1f970d10fce6ecb75c2f78888 92 SUPERFAMILY SSF54570 3 83 8.37E-36 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 AMK43_RS00420 a97953f1f970d10fce6ecb75c2f78888 92 PANTHER PTHR11880 1 88 4.8E-55 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00420 a97953f1f970d10fce6ecb75c2f78888 92 Gene3D G3DSA:3.30.860.10 1 89 7.5E-43 T 22-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 AMK43_RS00420 a97953f1f970d10fce6ecb75c2f78888 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 87 26.216 T 22-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 AMK43_RS03740 df91a4cb8f8fa0dd9d968013fb76c871 314 SUPERFAMILY SSF51445 41 286 3.48E-14 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS03740 df91a4cb8f8fa0dd9d968013fb76c871 314 Gene3D G3DSA:3.20.20.80 53 287 5.7E-10 T 22-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 AMK43_RS06480 a6506e3f7f7ce4b5013bb76c084984e7 370 Pfam PF01594 Domain of unknown function DUF20 14 349 1.0E-48 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like AMK43_RS06480 a6506e3f7f7ce4b5013bb76c084984e7 370 PANTHER PTHR21716 1 345 1.4E-53 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like AMK43_RS06480 a6506e3f7f7ce4b5013bb76c084984e7 370 PANTHER PTHR21716:SF9 1 345 1.4E-53 T 22-04-2016 AMK43_RS06480 a6506e3f7f7ce4b5013bb76c084984e7 370 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 15 348 8.7E-78 T 22-04-2016 IPR014227 Sporulation integral membrane protein YtvI AMK43_RS08300 7c973fc108d41fa3641f514c2f559bf2 298 TIGRFAM TIGR01875 cas_MJ0381: CRISPR-associated autoregulator DevR family 12 221 2.1E-48 T 22-04-2016 IPR010154 CRISPR-associated protein Cas7/Cst2/DevR AMK43_RS08300 7c973fc108d41fa3641f514c2f559bf2 298 TIGRFAM TIGR02585 cas_Cst2_DevR: CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP 10 290 3.6E-67 T 22-04-2016 IPR013414 CRISPR-associated protein Cas7, subtype I-B/Tneap AMK43_RS08300 7c973fc108d41fa3641f514c2f559bf2 298 Pfam PF01905 CRISPR-associated negative auto-regulator DevR/Csa2 7 220 1.1E-33 T 22-04-2016 IPR010154 CRISPR-associated protein Cas7/Cst2/DevR AMK43_RS08200 dde6cdbb08c0d4b2a4fa326c1979f4d2 198 PANTHER PTHR23091:SF183 22 159 3.1E-25 T 22-04-2016 AMK43_RS08200 dde6cdbb08c0d4b2a4fa326c1979f4d2 198 Pfam PF13420 Acetyltransferase (GNAT) domain 25 180 2.0E-30 T 22-04-2016 AMK43_RS08200 dde6cdbb08c0d4b2a4fa326c1979f4d2 198 Gene3D G3DSA:3.40.630.30 22 188 1.0E-38 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS08200 dde6cdbb08c0d4b2a4fa326c1979f4d2 198 PANTHER PTHR23091 22 159 3.1E-25 T 22-04-2016 AMK43_RS08200 dde6cdbb08c0d4b2a4fa326c1979f4d2 198 SUPERFAMILY SSF55729 25 186 7.75E-29 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS01665 d73d7d32198cea9da9b8bdd1ce2d35db 446 PRINTS PR00095 Anthranilate synthase component I signature 360 374 1.9E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK43_RS01665 d73d7d32198cea9da9b8bdd1ce2d35db 446 PRINTS PR00095 Anthranilate synthase component I signature 345 359 1.9E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK43_RS01665 d73d7d32198cea9da9b8bdd1ce2d35db 446 PRINTS PR00095 Anthranilate synthase component I signature 251 264 1.9E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK43_RS01665 d73d7d32198cea9da9b8bdd1ce2d35db 446 PRINTS PR00095 Anthranilate synthase component I signature 265 278 1.9E-18 T 22-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 AMK43_RS01665 d73d7d32198cea9da9b8bdd1ce2d35db 446 PANTHER PTHR11236 45 375 7.4E-129 T 22-04-2016 AMK43_RS01665 d73d7d32198cea9da9b8bdd1ce2d35db 446 Gene3D G3DSA:3.60.120.10 59 440 1.9E-120 T 22-04-2016 IPR005801 ADC synthase GO:0009058 AMK43_RS01665 d73d7d32198cea9da9b8bdd1ce2d35db 446 PANTHER PTHR11236:SF9 45 375 7.4E-129 T 22-04-2016 AMK43_RS01665 d73d7d32198cea9da9b8bdd1ce2d35db 446 SUPERFAMILY SSF56322 37 378 9.16E-113 T 22-04-2016 IPR005801 ADC synthase GO:0009058 AMK43_RS01665 d73d7d32198cea9da9b8bdd1ce2d35db 446 SUPERFAMILY SSF56322 405 438 9.16E-113 T 22-04-2016 IPR005801 ADC synthase GO:0009058 AMK43_RS01665 d73d7d32198cea9da9b8bdd1ce2d35db 446 Pfam PF00425 chorismate binding enzyme 150 429 2.0E-83 T 22-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal AMK43_RS01665 d73d7d32198cea9da9b8bdd1ce2d35db 446 PANTHER PTHR11236:SF9 398 435 7.4E-129 T 22-04-2016 AMK43_RS01665 d73d7d32198cea9da9b8bdd1ce2d35db 446 PANTHER PTHR11236 398 435 7.4E-129 T 22-04-2016 AMK43_RS08990 bf39421f60331927f8eec9a13135e875 133 Pfam PF04519 Polymer-forming cytoskeletal 22 115 5.1E-21 T 22-04-2016 IPR007607 Protein of unknown function DUF583 AMK43_RS08990 bf39421f60331927f8eec9a13135e875 133 PANTHER PTHR35024:SF2 22 115 2.1E-24 T 22-04-2016 AMK43_RS08990 bf39421f60331927f8eec9a13135e875 133 PANTHER PTHR35024 22 115 2.1E-24 T 22-04-2016 AMK43_RS08365 eece560c1ee954bdde8432345aedb272 147 SUPERFAMILY SSF46785 12 145 1.64E-25 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS08365 eece560c1ee954bdde8432345aedb272 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 111 9.1E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS08365 eece560c1ee954bdde8432345aedb272 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 76 91 9.1E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS08365 eece560c1ee954bdde8432345aedb272 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 59 75 9.1E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS08365 eece560c1ee954bdde8432345aedb272 147 PANTHER PTHR33164:SF6 13 127 5.0E-19 T 22-04-2016 AMK43_RS08365 eece560c1ee954bdde8432345aedb272 147 PANTHER PTHR33164 13 127 5.0E-19 T 22-04-2016 AMK43_RS08365 eece560c1ee954bdde8432345aedb272 147 Pfam PF01047 MarR family 38 99 5.4E-9 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS08365 eece560c1ee954bdde8432345aedb272 147 SMART SM00347 31 135 6.6E-12 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS08365 eece560c1ee954bdde8432345aedb272 147 Gene3D G3DSA:1.10.10.10 10 144 4.6E-29 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS09395 b41df9e8d58c90c9dc9557a474a1017e 438 SUPERFAMILY SSF53850 30 434 9.39E-81 T 22-04-2016 AMK43_RS09395 b41df9e8d58c90c9dc9557a474a1017e 438 Gene3D G3DSA:3.40.190.10 33 162 5.4E-24 T 22-04-2016 AMK43_RS09395 b41df9e8d58c90c9dc9557a474a1017e 438 Gene3D G3DSA:3.40.190.10 163 358 2.5E-43 T 22-04-2016 AMK43_RS09395 b41df9e8d58c90c9dc9557a474a1017e 438 PANTHER PTHR30061 1 437 1.2E-72 T 22-04-2016 AMK43_RS09395 b41df9e8d58c90c9dc9557a474a1017e 438 Pfam PF01547 Bacterial extracellular solute-binding protein 48 334 2.4E-44 T 22-04-2016 IPR006059 Solute-binding family 1 GO:0005215|GO:0006810 AMK43_RS10130 0820c3383ecf8a86cc6b7b7d1c06cc0a 252 Pfam PF02163 Peptidase family M50 168 223 9.6E-8 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 AMK43_RS10130 0820c3383ecf8a86cc6b7b7d1c06cc0a 252 PANTHER PTHR22939 73 237 1.8E-34 T 22-04-2016 AMK43_RS10130 0820c3383ecf8a86cc6b7b7d1c06cc0a 252 PANTHER PTHR22939:SF104 73 237 1.8E-34 T 22-04-2016 AMK43_RS08580 a4b9dfbdee021e020dba811ed0328da4 685 Gene3D G3DSA:1.10.1790.10 301 396 2.8E-13 T 22-04-2016 IPR011608 PRD domain GO:0006355 AMK43_RS08580 a4b9dfbdee021e020dba811ed0328da4 685 Gene3D G3DSA:3.40.50.270 405 488 5.9E-6 T 22-04-2016 AMK43_RS08580 a4b9dfbdee021e020dba811ed0328da4 685 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 544 681 9.7E-17 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS08580 a4b9dfbdee021e020dba811ed0328da4 685 Gene3D G3DSA:1.10.10.10 78 147 4.4E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS08580 a4b9dfbdee021e020dba811ed0328da4 685 Gene3D G3DSA:1.10.10.10 1 42 4.4E-5 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS08580 a4b9dfbdee021e020dba811ed0328da4 685 Gene3D G3DSA:3.40.930.10 542 682 7.9E-26 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS08580 a4b9dfbdee021e020dba811ed0328da4 685 Pfam PF08279 HTH domain 5 46 1.0E-4 T 22-04-2016 IPR013196 Helix-turn-helix, type 11 AMK43_RS08580 a4b9dfbdee021e020dba811ed0328da4 685 Pfam PF00874 PRD domain 304 392 9.0E-14 T 22-04-2016 IPR011608 PRD domain GO:0006355 AMK43_RS08580 a4b9dfbdee021e020dba811ed0328da4 685 SUPERFAMILY SSF55804 542 681 1.83E-21 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 AMK43_RS08580 a4b9dfbdee021e020dba811ed0328da4 685 PANTHER PTHR36203 1 685 5.9E-49 T 22-04-2016 AMK43_RS08580 a4b9dfbdee021e020dba811ed0328da4 685 SUPERFAMILY SSF63520 296 396 9.68E-14 T 22-04-2016 IPR011608 PRD domain GO:0006355 AMK43_RS05690 937f91f29951677190af2ac25b9390e4 647 SUPERFAMILY SSF48452 69 241 1.48E-13 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS05690 937f91f29951677190af2ac25b9390e4 647 Gene3D G3DSA:1.25.40.10 67 267 1.0E-15 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS04860 3d016e563db29d781fd574be5dfca7d5 248 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 20 103 3.9E-12 T 22-04-2016 IPR007577 Glycosyltransferase, DXD sugar-binding motif AMK43_RS04860 3d016e563db29d781fd574be5dfca7d5 248 SUPERFAMILY SSF53448 1 225 2.25E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS04860 3d016e563db29d781fd574be5dfca7d5 248 PANTHER PTHR12042:SF20 22 212 1.1E-50 T 22-04-2016 AMK43_RS04860 3d016e563db29d781fd574be5dfca7d5 248 PANTHER PTHR12042 22 212 1.1E-50 T 22-04-2016 AMK43_RS04860 3d016e563db29d781fd574be5dfca7d5 248 Pfam PF04572 Alpha 1,4-glycosyltransferase conserved region 127 215 2.7E-4 T 22-04-2016 IPR007652 Alpha 1,4-glycosyltransferase domain UniPathway: UPA00378 AMK43_RS02375 cffd8ed0db62a050ad0545db98b8bc3b 215 PANTHER PTHR30625:SF8 1 211 2.0E-46 T 22-04-2016 AMK43_RS02375 cffd8ed0db62a050ad0545db98b8bc3b 215 PANTHER PTHR30625 1 211 2.0E-46 T 22-04-2016 AMK43_RS02375 cffd8ed0db62a050ad0545db98b8bc3b 215 Pfam PF01618 MotA/TolQ/ExbB proton channel family 69 196 8.3E-35 T 22-04-2016 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 AMK43_RS00805 3bdd9491b5ef7646c7eb9ae1defe332f 250 Pfam PF06180 Cobalt chelatase (CbiK) 3 245 2.1E-67 T 22-04-2016 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 AMK43_RS00805 3bdd9491b5ef7646c7eb9ae1defe332f 250 SUPERFAMILY SSF53800 3 246 2.09E-61 T 22-04-2016 AMK43_RS00805 3bdd9491b5ef7646c7eb9ae1defe332f 250 PIRSF PIRSF033579 1 250 1.2E-73 T 22-04-2016 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 AMK43_RS00805 3bdd9491b5ef7646c7eb9ae1defe332f 250 Gene3D G3DSA:3.40.50.1400 1 141 4.7E-30 T 22-04-2016 AMK43_RS00805 3bdd9491b5ef7646c7eb9ae1defe332f 250 Gene3D G3DSA:3.40.50.1400 162 234 1.4E-23 T 22-04-2016 AMK43_RS09790 5475134bc2c8cb61a657903a7e083519 133 Gene3D G3DSA:3.30.2190.10 7 117 3.1E-41 T 22-04-2016 IPR018594 Domain of unknown function DUF2023 AMK43_RS09790 5475134bc2c8cb61a657903a7e083519 133 Pfam PF09633 Protein of unknown function (DUF2023) 16 114 5.8E-38 T 22-04-2016 IPR018594 Domain of unknown function DUF2023 AMK43_RS09790 5475134bc2c8cb61a657903a7e083519 133 SUPERFAMILY SSF160448 10 115 1.44E-38 T 22-04-2016 IPR018594 Domain of unknown function DUF2023 AMK43_RS03315 925f965e9307a9811af4a4e5944b2b39 195 Gene3D G3DSA:3.30.1330.30 28 121 1.2E-23 T 22-04-2016 IPR029064 50S ribosomal protein L30e-like AMK43_RS03315 925f965e9307a9811af4a4e5944b2b39 195 SUPERFAMILY SSF160515 28 121 3.27E-23 T 22-04-2016 AMK43_RS03315 925f965e9307a9811af4a4e5944b2b39 195 Pfam PF07997 Protein of unknown function (DUF1694) 27 119 6.8E-23 T 22-04-2016 IPR012543 Protein of unknown function DUF1694 AMK43_RS01200 89f067b4c9220f617b0a2f39561d89fb 524 PANTHER PTHR30003 4 524 5.3E-124 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AMK43_RS01200 89f067b4c9220f617b0a2f39561d89fb 524 Pfam PF02652 L-lactate permease 4 517 1.5E-123 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AMK43_RS01200 89f067b4c9220f617b0a2f39561d89fb 524 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 518 2.6E-117 T 22-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 AMK43_RS06315 c6e133178266b67c5a0e8232c5892c13 168 SUPERFAMILY SSF141488 95 157 6.28E-8 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor AMK43_RS06315 c6e133178266b67c5a0e8232c5892c13 168 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 96 158 9.6E-7 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor AMK43_RS07635 62244e240b77e803403cb7945abe1b74 541 Gene3D G3DSA:2.130.10.10 164 288 4.3E-5 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AMK43_RS07635 62244e240b77e803403cb7945abe1b74 541 Gene3D G3DSA:2.130.10.10 17 129 4.3E-5 T 22-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 AMK43_RS07635 62244e240b77e803403cb7945abe1b74 541 PANTHER PTHR11264 432 510 2.7E-14 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 AMK43_RS07635 62244e240b77e803403cb7945abe1b74 541 PANTHER PTHR11264 396 414 2.7E-14 T 22-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 AMK43_RS07635 62244e240b77e803403cb7945abe1b74 541 PANTHER PTHR11264:SF0 432 510 2.7E-14 T 22-04-2016 AMK43_RS07635 62244e240b77e803403cb7945abe1b74 541 PANTHER PTHR11264:SF0 396 414 2.7E-14 T 22-04-2016 AMK43_RS07635 62244e240b77e803403cb7945abe1b74 541 Gene3D G3DSA:3.40.470.10 297 539 1.9E-41 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK43_RS07635 62244e240b77e803403cb7945abe1b74 541 SUPERFAMILY SSF50978 69 142 2.93E-6 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 AMK43_RS07635 62244e240b77e803403cb7945abe1b74 541 SUPERFAMILY SSF50978 172 286 2.93E-6 T 22-04-2016 IPR017986 WD40-repeat-containing domain GO:0005515 AMK43_RS07635 62244e240b77e803403cb7945abe1b74 541 SUPERFAMILY SSF52141 312 539 8.07E-34 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK43_RS00230 027978db1fbec5ea7ed0e376c2fcab86 360 Pfam PF01040 UbiA prenyltransferase family 82 316 1.2E-12 T 22-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 AMK43_RS08645 0b817e8062b024cf85d55ef3b615d2a8 85 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 5 84 5.1E-35 T 22-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 AMK43_RS08645 0b817e8062b024cf85d55ef3b615d2a8 85 PANTHER PTHR38039:SF1 1 85 2.0E-29 T 22-04-2016 AMK43_RS08645 0b817e8062b024cf85d55ef3b615d2a8 85 SUPERFAMILY SSF143011 1 83 1.44E-25 T 22-04-2016 AMK43_RS08645 0b817e8062b024cf85d55ef3b615d2a8 85 PANTHER PTHR38039 1 85 2.0E-29 T 22-04-2016 AMK43_RS08645 0b817e8062b024cf85d55ef3b615d2a8 85 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 5 84 6.7E-31 T 22-04-2016 IPR009614 Toxin YoeB GO:0004519|GO:0006401 AMK43_RS08325 9dde62b2c952e7a57fdb37ba64ca9823 440 SUPERFAMILY SSF103473 48 436 1.92E-27 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK43_RS08325 9dde62b2c952e7a57fdb37ba64ca9823 440 Gene3D G3DSA:1.20.1250.20 15 219 8.6E-11 T 22-04-2016 AMK43_RS08325 9dde62b2c952e7a57fdb37ba64ca9823 440 Gene3D G3DSA:1.20.1250.20 237 434 2.3E-14 T 22-04-2016 AMK43_RS08325 9dde62b2c952e7a57fdb37ba64ca9823 440 PANTHER PTHR11328:SF24 12 439 2.9E-46 T 22-04-2016 AMK43_RS08325 9dde62b2c952e7a57fdb37ba64ca9823 440 PANTHER PTHR11328 12 439 2.9E-46 T 22-04-2016 AMK43_RS08325 9dde62b2c952e7a57fdb37ba64ca9823 440 Pfam PF13347 MFS/sugar transport protein 45 436 1.9E-52 T 22-04-2016 AMK43_RS01300 3377f869592c1bf044eb0d9a852112d3 440 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 11 413 3.8E-119 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AMK43_RS01300 3377f869592c1bf044eb0d9a852112d3 440 Pfam PF05525 Branched-chain amino acid transport protein 3 429 7.8E-137 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AMK43_RS01300 3377f869592c1bf044eb0d9a852112d3 440 PANTHER PTHR30588 1 439 2.1E-141 T 22-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 AMK43_RS01300 3377f869592c1bf044eb0d9a852112d3 440 PANTHER PTHR30588:SF0 1 439 2.1E-141 T 22-04-2016 AMK43_RS05520 c867182a294d1ce4aee7fcc4555b1a08 235 Gene3D G3DSA:3.30.1330.60 120 229 7.7E-31 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS05520 c867182a294d1ce4aee7fcc4555b1a08 235 Pfam PF00691 OmpA family 127 221 1.2E-20 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS05520 c867182a294d1ce4aee7fcc4555b1a08 235 PANTHER PTHR30128 127 230 6.3E-32 T 22-04-2016 AMK43_RS05520 c867182a294d1ce4aee7fcc4555b1a08 235 PRINTS PR01021 OMPA domain signature 127 149 1.2E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS05520 c867182a294d1ce4aee7fcc4555b1a08 235 PRINTS PR01021 OMPA domain signature 171 187 1.2E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS05520 c867182a294d1ce4aee7fcc4555b1a08 235 PRINTS PR01021 OMPA domain signature 156 171 1.2E-10 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS05520 c867182a294d1ce4aee7fcc4555b1a08 235 SUPERFAMILY SSF103088 120 227 3.27E-29 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS05805 8806175468d4b485c4c261bdaa9e4d4b 195 PANTHER PTHR30336 1 168 1.1E-40 T 22-04-2016 AMK43_RS05805 8806175468d4b485c4c261bdaa9e4d4b 195 Gene3D G3DSA:3.40.50.620 30 169 2.3E-24 T 22-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold AMK43_RS05805 8806175468d4b485c4c261bdaa9e4d4b 195 Pfam PF02698 DUF218 domain 36 182 4.8E-27 T 22-04-2016 IPR003848 Domain of unknown function DUF218 AMK43_RS05805 8806175468d4b485c4c261bdaa9e4d4b 195 PANTHER PTHR30336:SF4 1 168 1.1E-40 T 22-04-2016 AMK43_RS08540 32792303bff1c812c03589c9d4a7afc7 239 PANTHER PTHR11922:SF18 24 239 2.6E-54 T 22-04-2016 AMK43_RS08540 32792303bff1c812c03589c9d4a7afc7 239 SUPERFAMILY SSF52317 27 238 1.28E-40 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS08540 32792303bff1c812c03589c9d4a7afc7 239 Gene3D G3DSA:3.40.50.880 1 239 1.0E-53 T 22-04-2016 IPR029062 Class I glutamine amidotransferase-like AMK43_RS08540 32792303bff1c812c03589c9d4a7afc7 239 PANTHER PTHR11922 24 239 2.6E-54 T 22-04-2016 AMK43_RS08540 32792303bff1c812c03589c9d4a7afc7 239 Pfam PF07722 Peptidase C26 4 217 1.4E-66 T 22-04-2016 IPR011697 Peptidase C26 GO:0006541|GO:0016787 AMK43_RS07395 a42507622ee8175a12becb56e2f07713 249 Gene3D G3DSA:3.90.550.10 5 234 2.8E-54 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS07395 a42507622ee8175a12becb56e2f07713 249 SUPERFAMILY SSF53448 5 222 3.89E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS07395 a42507622ee8175a12becb56e2f07713 249 PANTHER PTHR22916 1 243 8.1E-50 T 22-04-2016 AMK43_RS07395 a42507622ee8175a12becb56e2f07713 249 Pfam PF00535 Glycosyl transferase family 2 7 163 1.5E-37 T 22-04-2016 IPR001173 Glycosyltransferase 2-like AMK43_RS05215 97f1377614138e842ec062d1a8bc2d1d 333 SUPERFAMILY SSF103486 6 329 8.11E-71 T 22-04-2016 IPR002843 ATPase, V0 complex, c/d subunit AMK43_RS05215 97f1377614138e842ec062d1a8bc2d1d 333 PANTHER PTHR38682 1 333 1.0E-67 T 22-04-2016 AMK43_RS05215 97f1377614138e842ec062d1a8bc2d1d 333 PANTHER PTHR38682:SF1 1 333 1.0E-67 T 22-04-2016 AMK43_RS05215 97f1377614138e842ec062d1a8bc2d1d 333 Pfam PF01992 ATP synthase (C/AC39) subunit 13 327 1.4E-65 T 22-04-2016 IPR002843 ATPase, V0 complex, c/d subunit AMK43_RS03595 bb99adb9ed5fb13d4872360dcefbfdbb 409 Gene3D G3DSA:1.10.10.10 139 231 1.8E-16 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS03595 bb99adb9ed5fb13d4872360dcefbfdbb 409 Pfam PF01051 Initiator Replication protein 50 224 1.3E-10 T 22-04-2016 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 AMK43_RS03595 bb99adb9ed5fb13d4872360dcefbfdbb 409 SUPERFAMILY SSF46785 125 229 2.86E-13 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02530 30468225191fa3952e7a4d54815e6fdc 1433 SUPERFAMILY SSF51161 336 374 5.03E-5 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK43_RS02530 30468225191fa3952e7a4d54815e6fdc 1433 SUPERFAMILY SSF51161 419 454 5.03E-5 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK43_RS02530 30468225191fa3952e7a4d54815e6fdc 1433 Pfam PF13332 Haemagluttinin repeat 248 317 0.0015 T 22-04-2016 IPR025157 Haemagluttinin repeat AMK43_RS02530 30468225191fa3952e7a4d54815e6fdc 1433 Pfam PF13332 Haemagluttinin repeat 557 720 4.3E-17 T 22-04-2016 IPR025157 Haemagluttinin repeat AMK43_RS08615 629bdd20a236d3167830789a0dfeea09 369 Gene3D G3DSA:3.20.20.70 1 339 6.9E-84 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS08615 629bdd20a236d3167830789a0dfeea09 369 PANTHER PTHR22893 6 348 1.7E-111 T 22-04-2016 AMK43_RS08615 629bdd20a236d3167830789a0dfeea09 369 SUPERFAMILY SSF51395 2 333 1.66E-82 T 22-04-2016 AMK43_RS08615 629bdd20a236d3167830789a0dfeea09 369 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 11 332 1.5E-65 T 22-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 AMK43_RS08615 629bdd20a236d3167830789a0dfeea09 369 PANTHER PTHR22893:SF48 6 348 1.7E-111 T 22-04-2016 AMK43_RS09375 0b64d5d4504a3060f0d221da0b6526d6 283 PANTHER PTHR10587:SF15 79 264 5.7E-41 T 22-04-2016 AMK43_RS09375 0b64d5d4504a3060f0d221da0b6526d6 283 SUPERFAMILY SSF88713 78 263 6.95E-48 T 22-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 AMK43_RS09375 0b64d5d4504a3060f0d221da0b6526d6 283 Gene3D G3DSA:3.20.20.370 73 266 4.6E-53 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK43_RS09375 0b64d5d4504a3060f0d221da0b6526d6 283 Pfam PF01522 Polysaccharide deacetylase 75 188 1.3E-26 T 22-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 AMK43_RS09375 0b64d5d4504a3060f0d221da0b6526d6 283 PANTHER PTHR10587 79 264 5.7E-41 T 22-04-2016 AMK43_RS10075 e79da2bfc330729cf2d6911433e12c00 155 PANTHER PTHR33540 1 146 1.6E-32 T 22-04-2016 AMK43_RS10075 e79da2bfc330729cf2d6911433e12c00 155 Gene3D G3DSA:3.40.50.300 10 145 1.8E-38 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10075 e79da2bfc330729cf2d6911433e12c00 155 SUPERFAMILY SSF52540 22 126 4.22E-19 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS10075 e79da2bfc330729cf2d6911433e12c00 155 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 12 133 3.0E-32 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMK43_RS10075 e79da2bfc330729cf2d6911433e12c00 155 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 11 137 1.0E-29 T 22-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 AMK43_RS02825 7f683b9a6783548884d230e457506530 410 Gene3D G3DSA:3.40.710.10 22 386 9.2E-86 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS02825 7f683b9a6783548884d230e457506530 410 SUPERFAMILY SSF56601 275 381 1.13E-80 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS02825 7f683b9a6783548884d230e457506530 410 SUPERFAMILY SSF56601 24 237 1.13E-80 T 22-04-2016 IPR012338 Beta-lactamase/transpeptidase-like AMK43_RS02825 7f683b9a6783548884d230e457506530 410 PANTHER PTHR22935 22 401 5.6E-73 T 22-04-2016 AMK43_RS02825 7f683b9a6783548884d230e457506530 410 Pfam PF00144 Beta-lactamase 28 387 8.4E-62 T 22-04-2016 IPR001466 Beta-lactamase-related AMK43_RS08880 3acb17c24ef31d1ef190b3e3f0d4407d 186 Gene3D G3DSA:1.20.1440.20 11 186 4.7E-59 T 22-04-2016 IPR023353 LemA-like domain AMK43_RS08880 3acb17c24ef31d1ef190b3e3f0d4407d 186 PANTHER PTHR34478 1 186 1.8E-71 T 22-04-2016 AMK43_RS08880 3acb17c24ef31d1ef190b3e3f0d4407d 186 PANTHER PTHR34478:SF2 1 186 1.8E-71 T 22-04-2016 AMK43_RS08880 3acb17c24ef31d1ef190b3e3f0d4407d 186 SUPERFAMILY SSF140478 24 176 5.62E-51 T 22-04-2016 IPR023353 LemA-like domain AMK43_RS08880 3acb17c24ef31d1ef190b3e3f0d4407d 186 Pfam PF04011 LemA family 4 186 7.5E-64 T 22-04-2016 IPR007156 LemA AMK43_RS04870 d1838772fdc1823614e6ae959b915551 122 SUPERFAMILY SSF50475 1 121 1.2E-27 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK43_RS04870 d1838772fdc1823614e6ae959b915551 122 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 2 95 4.8E-10 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK43_RS04870 d1838772fdc1823614e6ae959b915551 122 Gene3D G3DSA:2.30.110.10 1 121 4.2E-46 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK43_RS07565 beb99dda59e6ca1e7bf21c5be9704d22 461 Pfam PF00534 Glycosyl transferases group 1 265 412 2.8E-17 T 22-04-2016 IPR001296 Glycosyl transferase, family 1 AMK43_RS07565 beb99dda59e6ca1e7bf21c5be9704d22 461 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 2 456 4.1E-148 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 AMK43_RS07565 beb99dda59e6ca1e7bf21c5be9704d22 461 Pfam PF08323 Starch synthase catalytic domain 2 221 4.7E-66 T 22-04-2016 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 AMK43_RS07565 beb99dda59e6ca1e7bf21c5be9704d22 461 PANTHER PTHR12526 2 458 6.8E-121 T 22-04-2016 AMK43_RS07565 beb99dda59e6ca1e7bf21c5be9704d22 461 Gene3D G3DSA:3.40.50.2000 236 438 1.8E-61 T 22-04-2016 AMK43_RS07565 beb99dda59e6ca1e7bf21c5be9704d22 461 Hamap MF_00484 Glycogen synthase [glgA]. 1 458 39.44 T 22-04-2016 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622|UniPathway: UPA00164 AMK43_RS07565 beb99dda59e6ca1e7bf21c5be9704d22 461 PANTHER PTHR12526:SF17 2 458 6.8E-121 T 22-04-2016 AMK43_RS07565 beb99dda59e6ca1e7bf21c5be9704d22 461 SUPERFAMILY SSF53756 3 460 2.32E-103 T 22-04-2016 AMK43_RS02645 c5f43e73141edd64f8a6ec6b24b09c68 351 Pfam PF00482 Type II secretion system (T2SS), protein F 25 144 4.5E-17 T 22-04-2016 IPR018076 Type II secretion system F domain AMK43_RS02645 c5f43e73141edd64f8a6ec6b24b09c68 351 Pfam PF00482 Type II secretion system (T2SS), protein F 222 343 3.1E-22 T 22-04-2016 IPR018076 Type II secretion system F domain AMK43_RS02645 c5f43e73141edd64f8a6ec6b24b09c68 351 PANTHER PTHR30012 14 351 8.9E-74 T 22-04-2016 AMK43_RS02645 c5f43e73141edd64f8a6ec6b24b09c68 351 PANTHER PTHR30012:SF0 14 351 8.9E-74 T 22-04-2016 AMK43_RS02645 c5f43e73141edd64f8a6ec6b24b09c68 351 PRINTS PR00812 Bacterial general secretion pathway protein F signature 116 144 2.8E-14 T 22-04-2016 IPR003004 GspF/PilC family AMK43_RS02645 c5f43e73141edd64f8a6ec6b24b09c68 351 PRINTS PR00812 Bacterial general secretion pathway protein F signature 332 351 2.8E-14 T 22-04-2016 IPR003004 GspF/PilC family AMK43_RS02645 c5f43e73141edd64f8a6ec6b24b09c68 351 PRINTS PR00812 Bacterial general secretion pathway protein F signature 316 330 2.8E-14 T 22-04-2016 IPR003004 GspF/PilC family AMK43_RS02645 c5f43e73141edd64f8a6ec6b24b09c68 351 PRINTS PR00812 Bacterial general secretion pathway protein F signature 20 32 2.8E-14 T 22-04-2016 IPR003004 GspF/PilC family AMK43_RS09160 54c8ae90b855b1e6e7786c7485a7697e 298 PANTHER PTHR11614:SF87 1 296 1.7E-26 T 22-04-2016 AMK43_RS09160 54c8ae90b855b1e6e7786c7485a7697e 298 SUPERFAMILY SSF53474 2 297 1.71E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS09160 54c8ae90b855b1e6e7786c7485a7697e 298 PANTHER PTHR11614 1 296 1.7E-26 T 22-04-2016 AMK43_RS09160 54c8ae90b855b1e6e7786c7485a7697e 298 Gene3D G3DSA:3.40.50.1820 4 145 3.6E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS09160 54c8ae90b855b1e6e7786c7485a7697e 298 Gene3D G3DSA:3.40.50.1820 179 296 3.6E-41 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS09160 54c8ae90b855b1e6e7786c7485a7697e 298 Pfam PF12146 Serine aminopeptidase, S33 28 280 4.0E-35 T 22-04-2016 IPR022742 Serine aminopeptidase, S33 AMK43_RS09750 952a941c336ed73c5c2a16c181c0fcde 44 Pfam PF04723 Glycine reductase complex selenoprotein A 4 44 1.3E-16 T 22-04-2016 IPR006812 Glycine reductase complex selenoprotein A GO:0030699|GO:0030700|GO:0050485|GO:0055114 AMK43_RS09400 9234c32265041e617bea41bdd6891852 292 PANTHER PTHR30193:SF6 1 291 4.4E-76 T 22-04-2016 AMK43_RS09400 9234c32265041e617bea41bdd6891852 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 285 7.1E-23 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09400 9234c32265041e617bea41bdd6891852 292 SUPERFAMILY SSF161098 49 276 1.31E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09400 9234c32265041e617bea41bdd6891852 292 PANTHER PTHR30193 1 291 4.4E-76 T 22-04-2016 AMK43_RS09400 9234c32265041e617bea41bdd6891852 292 Gene3D G3DSA:1.10.3720.10 5 277 3.2E-62 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS03235 273f53e799974ac29291c410638781e4 235 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 225 2.4E-99 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMK43_RS03235 273f53e799974ac29291c410638781e4 235 SUPERFAMILY SSF56808 6 225 2.62E-80 T 22-04-2016 IPR023674 Ribosomal protein L1-like AMK43_RS03235 273f53e799974ac29291c410638781e4 235 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 41.057 T 22-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMK43_RS03235 273f53e799974ac29291c410638781e4 235 Pfam PF00687 Ribosomal protein L1p/L10e family 32 220 5.5E-51 T 22-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein AMK43_RS03235 273f53e799974ac29291c410638781e4 235 PANTHER PTHR23105 19 226 1.0E-77 T 22-04-2016 AMK43_RS03235 273f53e799974ac29291c410638781e4 235 Gene3D G3DSA:3.40.50.790 69 159 2.2E-39 T 22-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich AMK43_RS03235 273f53e799974ac29291c410638781e4 235 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 22-04-2016 IPR023673 Ribosomal protein L1, conserved site AMK43_RS03235 273f53e799974ac29291c410638781e4 235 PIRSF PIRSF002155 1 227 1.6E-76 T 22-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 AMK43_RS03235 273f53e799974ac29291c410638781e4 235 PANTHER PTHR23105:SF5 19 226 1.0E-77 T 22-04-2016 AMK43_RS03235 273f53e799974ac29291c410638781e4 235 Gene3D G3DSA:3.30.190.20 17 68 6.9E-44 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 AMK43_RS03235 273f53e799974ac29291c410638781e4 235 Gene3D G3DSA:3.30.190.20 161 225 6.9E-44 T 22-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 AMK43_RS04000 b9de17df1fc37c5ba61faef65492659a 147 Gene3D G3DSA:2.60.320.10 51 132 1.6E-8 T 22-04-2016 IPR024045 NusG, domain 2 AMK43_RS04000 b9de17df1fc37c5ba61faef65492659a 147 Pfam PF07009 NusG domain II 27 133 6.5E-17 T 22-04-2016 IPR024045 NusG, domain 2 AMK43_RS02790 9090aa63bf1d36d6ddec16137a61db31 122 Pfam PF03013 Pyrimidine dimer DNA glycosylase 1 109 1.1E-33 T 22-04-2016 IPR004260 Pyrimidine dimer DNA glycosylase AMK43_RS02790 9090aa63bf1d36d6ddec16137a61db31 122 TIGRFAM TIGR02328 TIGR02328: conserved hypothetical protein 1 120 1.8E-60 T 22-04-2016 IPR012650 Conserved hypothetical protein CHP02328 AMK43_RS01335 6e30a226ff1f390037b4dca648fbd7d2 165 TIGRFAM TIGR01909 C_GCAxxG_C_C: C_GCAxxG_C_C family protein 32 151 1.9E-24 T 22-04-2016 IPR010181 CGCAxxGCC motif AMK43_RS01335 6e30a226ff1f390037b4dca648fbd7d2 165 Pfam PF09719 Putative redox-active protein (C_GCAxxG_C_C) 32 151 9.4E-28 T 22-04-2016 IPR010181 CGCAxxGCC motif AMK43_RS01335 6e30a226ff1f390037b4dca648fbd7d2 165 SUPERFAMILY SSF48695 22 153 3.14E-9 T 22-04-2016 IPR011031 Multihaem cytochrome AMK43_RS09305 4c611af4004ea6212d46195d5ca21881 181 SUPERFAMILY SSF54523 10 87 4.55E-8 T 22-04-2016 AMK43_RS09305 4c611af4004ea6212d46195d5ca21881 181 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 2.9E-5 T 22-04-2016 IPR012902 Prokaryotic N-terminal methylation site AMK43_RS09250 c8840196925a6a3187a5e5e809b35928 278 PANTHER PTHR19959 1 274 9.2E-41 T 22-04-2016 AMK43_RS09250 c8840196925a6a3187a5e5e809b35928 278 SUPERFAMILY SSF48452 130 254 2.28E-19 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS09250 c8840196925a6a3187a5e5e809b35928 278 Pfam PF13424 Tetratricopeptide repeat 53 126 2.2E-10 T 22-04-2016 AMK43_RS09250 c8840196925a6a3187a5e5e809b35928 278 Pfam PF13424 Tetratricopeptide repeat 140 208 1.4E-9 T 22-04-2016 AMK43_RS09250 c8840196925a6a3187a5e5e809b35928 278 Pfam PF13424 Tetratricopeptide repeat 220 276 1.5E-8 T 22-04-2016 AMK43_RS09250 c8840196925a6a3187a5e5e809b35928 278 PANTHER PTHR19959:SF135 1 274 9.2E-41 T 22-04-2016 AMK43_RS09250 c8840196925a6a3187a5e5e809b35928 278 SMART SM00028 52 85 110.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS09250 c8840196925a6a3187a5e5e809b35928 278 SMART SM00028 177 210 120.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS09250 c8840196925a6a3187a5e5e809b35928 278 SMART SM00028 94 127 40.0 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS09250 c8840196925a6a3187a5e5e809b35928 278 SMART SM00028 136 169 0.0021 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS09250 c8840196925a6a3187a5e5e809b35928 278 SMART SM00028 219 252 0.0049 T 22-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 AMK43_RS09250 c8840196925a6a3187a5e5e809b35928 278 SUPERFAMILY SSF48452 19 126 1.14E-7 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS09250 c8840196925a6a3187a5e5e809b35928 278 Gene3D G3DSA:1.25.40.10 20 272 2.5E-26 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS10315 0c79026fbda8ad583059e7d1e0c9485e 167 Pfam PF02517 CAAX protease self-immunity 24 114 2.0E-8 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 AMK43_RS05160 ad53e0c8ee6a4ee8d6312652452a3f02 231 Gene3D G3DSA:1.25.40.20 92 225 1.2E-30 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain AMK43_RS05160 ad53e0c8ee6a4ee8d6312652452a3f02 231 Pfam PF12796 Ankyrin repeats (3 copies) 134 200 2.3E-9 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain AMK43_RS05160 ad53e0c8ee6a4ee8d6312652452a3f02 231 PANTHER PTHR24198 92 225 1.9E-27 T 22-04-2016 AMK43_RS05160 ad53e0c8ee6a4ee8d6312652452a3f02 231 SUPERFAMILY SSF48403 92 224 3.02E-28 T 22-04-2016 IPR020683 Ankyrin repeat-containing domain AMK43_RS05160 ad53e0c8ee6a4ee8d6312652452a3f02 231 Pfam PF13606 Ankyrin repeat 101 128 0.0011 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMK43_RS05160 ad53e0c8ee6a4ee8d6312652452a3f02 231 SMART SM00248 134 164 7.9 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMK43_RS05160 ad53e0c8ee6a4ee8d6312652452a3f02 231 SMART SM00248 169 198 0.29 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMK43_RS05160 ad53e0c8ee6a4ee8d6312652452a3f02 231 SMART SM00248 100 129 4.4E-4 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMK43_RS05160 ad53e0c8ee6a4ee8d6312652452a3f02 231 SMART SM00248 202 230 2200.0 T 22-04-2016 IPR002110 Ankyrin repeat GO:0005515 AMK43_RS06275 316bc7822e8dd7e63836b11004c6fe4c 150 SUPERFAMILY SSF140931 87 132 5.23E-6 T 22-04-2016 IPR003812 Fido domain AMK43_RS06275 316bc7822e8dd7e63836b11004c6fe4c 150 Gene3D G3DSA:1.10.3290.10 78 132 4.8E-6 T 22-04-2016 IPR003812 Fido domain AMK43_RS10630 658eb013a8c7a1b2030abdf9870152c1 122 PANTHER PTHR14552 32 115 8.0E-15 T 22-04-2016 AMK43_RS10630 658eb013a8c7a1b2030abdf9870152c1 122 SUPERFAMILY SSF101386 29 107 4.58E-17 T 22-04-2016 AMK43_RS10630 658eb013a8c7a1b2030abdf9870152c1 122 Gene3D G3DSA:1.10.287.1080 3 98 7.7E-19 T 22-04-2016 AMK43_RS10630 658eb013a8c7a1b2030abdf9870152c1 122 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 35 101 2.7E-9 T 22-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core AMK43_RS08190 c921ca6ff5be24bceb15d6987e535e79 300 PANTHER PTHR11562:SF17 7 293 9.0E-91 T 22-04-2016 AMK43_RS08190 c921ca6ff5be24bceb15d6987e535e79 300 Pfam PF01545 Cation efflux family 22 215 3.5E-49 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK43_RS08190 c921ca6ff5be24bceb15d6987e535e79 300 SUPERFAMILY SSF160240 220 294 4.71E-7 T 22-04-2016 AMK43_RS08190 c921ca6ff5be24bceb15d6987e535e79 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 19 294 1.3E-79 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK43_RS08190 c921ca6ff5be24bceb15d6987e535e79 300 Gene3D G3DSA:1.20.1510.10 19 215 1.7E-55 T 22-04-2016 IPR027469 Cation efflux protein transmembrane domain AMK43_RS08190 c921ca6ff5be24bceb15d6987e535e79 300 SUPERFAMILY SSF161111 16 216 1.96E-54 T 22-04-2016 AMK43_RS08190 c921ca6ff5be24bceb15d6987e535e79 300 PANTHER PTHR11562 7 293 9.0E-91 T 22-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 AMK43_RS04795 c0c1004539ede8ba1af2bd47e354761c 275 Gene3D G3DSA:2.40.50.100 171 232 7.8E-4 T 22-04-2016 AMK43_RS04795 c0c1004539ede8ba1af2bd47e354761c 275 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 7 263 5.0E-109 T 22-04-2016 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family AMK43_RS02640 c8e9491f3bdf25be77370e7f4a2fb22e 498 SUPERFAMILY SSF103473 14 390 7.06E-33 T 22-04-2016 IPR020846 Major facilitator superfamily domain AMK43_RS02640 c8e9491f3bdf25be77370e7f4a2fb22e 498 PANTHER PTHR23526:SF2 15 444 5.2E-37 T 22-04-2016 AMK43_RS02640 c8e9491f3bdf25be77370e7f4a2fb22e 498 Gene3D G3DSA:1.20.1250.20 18 190 3.5E-10 T 22-04-2016 AMK43_RS02640 c8e9491f3bdf25be77370e7f4a2fb22e 498 Gene3D G3DSA:1.20.1250.20 212 399 2.9E-12 T 22-04-2016 AMK43_RS02640 c8e9491f3bdf25be77370e7f4a2fb22e 498 Pfam PF07690 Major Facilitator Superfamily 19 357 6.3E-23 T 22-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 AMK43_RS02640 c8e9491f3bdf25be77370e7f4a2fb22e 498 PANTHER PTHR23526 15 444 5.2E-37 T 22-04-2016 AMK43_RS05395 a98233b92b786e4cfa2248bd0aeaec71 247 SUPERFAMILY SSF56300 8 217 5.32E-35 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS05395 a98233b92b786e4cfa2248bd0aeaec71 247 Pfam PF00149 Calcineurin-like phosphoesterase 15 194 1.0E-14 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK43_RS05395 a98233b92b786e4cfa2248bd0aeaec71 247 PANTHER PTHR24032:SF31 112 246 4.8E-26 T 22-04-2016 AMK43_RS05395 a98233b92b786e4cfa2248bd0aeaec71 247 PANTHER PTHR24032:SF31 1 94 4.8E-26 T 22-04-2016 AMK43_RS05395 a98233b92b786e4cfa2248bd0aeaec71 247 PANTHER PTHR24032 112 246 4.8E-26 T 22-04-2016 AMK43_RS05395 a98233b92b786e4cfa2248bd0aeaec71 247 PANTHER PTHR24032 1 94 4.8E-26 T 22-04-2016 AMK43_RS05395 a98233b92b786e4cfa2248bd0aeaec71 247 Gene3D G3DSA:3.60.21.10 6 229 4.5E-38 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS04055 8042a597ed8bf3f844c81fef70a681a3 229 PANTHER PTHR24220 7 224 4.0E-59 T 22-04-2016 AMK43_RS04055 8042a597ed8bf3f844c81fef70a681a3 229 PANTHER PTHR24220:SF218 7 224 4.0E-59 T 22-04-2016 AMK43_RS04055 8042a597ed8bf3f844c81fef70a681a3 229 SUPERFAMILY SSF52540 3 224 2.39E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04055 8042a597ed8bf3f844c81fef70a681a3 229 Gene3D G3DSA:3.40.50.300 4 226 4.2E-48 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS04055 8042a597ed8bf3f844c81fef70a681a3 229 SMART SM00382 30 216 1.6E-9 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS04055 8042a597ed8bf3f844c81fef70a681a3 229 Pfam PF00005 ABC transporter 21 160 4.6E-25 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS04055 8042a597ed8bf3f844c81fef70a681a3 229 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS08075 649921022b97add9dced28c91a5d0f40 143 Pfam PF06250 Protein of unknown function (DUF1016) 10 142 2.0E-43 T 22-04-2016 IPR009362 Protein of unknown function DUF1016 AMK43_RS08075 649921022b97add9dced28c91a5d0f40 143 PANTHER PTHR30547 6 143 2.1E-42 T 22-04-2016 AMK43_RS08075 649921022b97add9dced28c91a5d0f40 143 PANTHER PTHR30547:SF5 6 143 2.1E-42 T 22-04-2016 AMK43_RS04855 cbc6022d93c8f223e322ac9f891b4ce4 159 Pfam PF00583 Acetyltransferase (GNAT) family 60 134 2.8E-11 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS04855 cbc6022d93c8f223e322ac9f891b4ce4 159 Gene3D G3DSA:3.40.630.30 11 154 1.0E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS04855 cbc6022d93c8f223e322ac9f891b4ce4 159 SUPERFAMILY SSF55729 49 141 1.38E-19 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS00290 733423e66c795c1114a59b643f3b7a06 375 Pfam PF01098 Cell cycle protein 11 356 3.4E-80 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AMK43_RS00290 733423e66c795c1114a59b643f3b7a06 375 PANTHER PTHR30474 1 374 1.2E-100 T 22-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 AMK43_RS08510 8539371115a78bde7266f0355e4963f5 335 Gene3D G3DSA:1.10.10.10 1 83 5.4E-34 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS08510 8539371115a78bde7266f0355e4963f5 335 PIRSF PIRSF005485 1 335 9.6E-76 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMK43_RS08510 8539371115a78bde7266f0355e4963f5 335 Gene3D G3DSA:3.30.450.40 192 333 6.1E-21 T 22-04-2016 IPR029016 GAF domain-like AMK43_RS08510 8539371115a78bde7266f0355e4963f5 335 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 324 22.422 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMK43_RS08510 8539371115a78bde7266f0355e4963f5 335 PANTHER PTHR34824 1 334 2.0E-85 T 22-04-2016 AMK43_RS08510 8539371115a78bde7266f0355e4963f5 335 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 2 330 2.4E-80 T 22-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 AMK43_RS08510 8539371115a78bde7266f0355e4963f5 335 SUPERFAMILY SSF55781 70 333 3.92E-37 T 22-04-2016 IPR029016 GAF domain-like AMK43_RS08510 8539371115a78bde7266f0355e4963f5 335 SUPERFAMILY SSF46785 1 83 5.96E-22 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS08510 8539371115a78bde7266f0355e4963f5 335 Pfam PF01628 HrcA protein C terminal domain 105 317 2.9E-35 T 22-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 AMK43_RS05040 9bad9a468bfd6923ad4c38fb14d45539 379 PANTHER PTHR11089:SF3 5 374 3.5E-62 T 22-04-2016 AMK43_RS05040 9bad9a468bfd6923ad4c38fb14d45539 379 SUPERFAMILY SSF52540 57 263 3.5E-29 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05040 9bad9a468bfd6923ad4c38fb14d45539 379 Pfam PF01926 50S ribosome-binding GTPase 165 266 1.5E-14 T 22-04-2016 IPR006073 GTP binding domain GO:0005525 AMK43_RS05040 9bad9a468bfd6923ad4c38fb14d45539 379 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 5 374 3.8E-94 T 22-04-2016 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH AMK43_RS05040 9bad9a468bfd6923ad4c38fb14d45539 379 PANTHER PTHR11089 5 374 3.5E-62 T 22-04-2016 AMK43_RS05040 9bad9a468bfd6923ad4c38fb14d45539 379 Gene3D G3DSA:3.40.50.300 61 219 9.1E-31 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07630 f5a509f2510d3a7cbaeb4fd5ff36bbd3 422 Gene3D G3DSA:3.40.50.2000 12 172 2.0E-9 T 22-04-2016 AMK43_RS07630 f5a509f2510d3a7cbaeb4fd5ff36bbd3 422 SUPERFAMILY SSF53756 8 418 5.42E-46 T 22-04-2016 AMK43_RS07630 f5a509f2510d3a7cbaeb4fd5ff36bbd3 422 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 294 400 3.7E-5 T 22-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 AMK43_RS07630 f5a509f2510d3a7cbaeb4fd5ff36bbd3 422 Gene3D G3DSA:3.40.50.2000 254 397 1.3E-15 T 22-04-2016 AMK43_RS08215 5c63d01a7b81cf34cb609d426e0cee61 265 PANTHER PTHR13600 8 209 3.6E-70 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- AMK43_RS08215 5c63d01a7b81cf34cb609d426e0cee61 265 Pfam PF04072 Leucine carboxyl methyltransferase 57 169 6.7E-10 T 22-04-2016 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- AMK43_RS08215 5c63d01a7b81cf34cb609d426e0cee61 265 Gene3D G3DSA:3.40.50.150 7 225 7.1E-38 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS08215 5c63d01a7b81cf34cb609d426e0cee61 265 PIRSF PIRSF028177 1 265 5.4E-94 T 22-04-2016 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.-|UniPathway: UPA00174 AMK43_RS08215 5c63d01a7b81cf34cb609d426e0cee61 265 PANTHER PTHR13600:SF19 8 209 3.6E-70 T 22-04-2016 AMK43_RS08215 5c63d01a7b81cf34cb609d426e0cee61 265 SUPERFAMILY SSF53335 8 225 2.74E-45 T 22-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase AMK43_RS08525 d26f36a6c676fd24a324dfeed4c2fc67 128 Pfam PF06115 Domain of unknown function (DUF956) 1 113 1.8E-39 T 22-04-2016 IPR010360 Protein of unknown function DUF956 AMK43_RS11285 f404a1517495cdc01f8d80e01030c406 257 Pfam PF04488 Glycosyltransferase sugar-binding region containing DXD motif 20 104 1.2E-14 T 22-04-2016 IPR007577 Glycosyltransferase, DXD sugar-binding motif AMK43_RS11285 f404a1517495cdc01f8d80e01030c406 257 PANTHER PTHR12042:SF20 24 237 4.0E-46 T 22-04-2016 AMK43_RS11285 f404a1517495cdc01f8d80e01030c406 257 PANTHER PTHR12042 24 237 4.0E-46 T 22-04-2016 AMK43_RS11285 f404a1517495cdc01f8d80e01030c406 257 SUPERFAMILY SSF53448 3 238 5.18E-57 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS09175 e7b085e248bd7f2aa422eeea04de7805 250 Pfam PF02361 Cobalt transport protein 9 215 4.9E-28 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component AMK43_RS09175 e7b085e248bd7f2aa422eeea04de7805 250 PANTHER PTHR33514:SF4 6 250 2.9E-33 T 22-04-2016 AMK43_RS09175 e7b085e248bd7f2aa422eeea04de7805 250 PANTHER PTHR33514 6 250 2.9E-33 T 22-04-2016 AMK43_RS05820 61d7a0dd2c08849a4cf88835ff5573dd 244 Gene3D G3DSA:3.40.50.1820 9 243 1.2E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS05820 61d7a0dd2c08849a4cf88835ff5573dd 244 SUPERFAMILY SSF53474 6 241 8.76E-23 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS05820 61d7a0dd2c08849a4cf88835ff5573dd 244 Pfam PF00756 Putative esterase 10 236 7.1E-14 T 22-04-2016 IPR000801 Putative esterase AMK43_RS01435 e1f43bf124fcb3aed999ea2ff9e53080 767 Pfam PF16933 Putative exopolysaccharide Exporter (EPS-E) 1 459 3.2E-124 T 22-04-2016 IPR031617 Putative exopolysaccharide exporter AMK43_RS11125 c7baf0da7ee8b95488b7268570f49520 64 Pfam PF04138 GtrA-like protein 3 62 6.5E-9 T 22-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 AMK43_RS01810 49119be9f80616c874861fd6c7d98990 321 PANTHER PTHR22911 5 321 2.1E-56 T 22-04-2016 AMK43_RS01810 49119be9f80616c874861fd6c7d98990 321 PANTHER PTHR22911:SF53 5 321 2.1E-56 T 22-04-2016 AMK43_RS01810 49119be9f80616c874861fd6c7d98990 321 SUPERFAMILY SSF103481 198 305 9.42E-6 T 22-04-2016 AMK43_RS01810 49119be9f80616c874861fd6c7d98990 321 Pfam PF00892 EamA-like transporter family 8 149 3.6E-17 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK43_RS01810 49119be9f80616c874861fd6c7d98990 321 Pfam PF00892 EamA-like transporter family 166 302 1.4E-12 T 22-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 AMK43_RS11315 88d6a51498c2547923e1a1e17d7b2838 254 SUPERFAMILY SSF89946 133 253 1.83E-33 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain AMK43_RS11315 88d6a51498c2547923e1a1e17d7b2838 254 Pfam PF05117 Family of unknown function (DUF695) 10 142 1.3E-43 T 22-04-2016 IPR016097 Domain of unknown function DUF695 AMK43_RS11315 88d6a51498c2547923e1a1e17d7b2838 254 Gene3D G3DSA:3.30.70.970 133 253 6.7E-38 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain AMK43_RS11315 88d6a51498c2547923e1a1e17d7b2838 254 Pfam PF06877 Regulator of ribonuclease activity B 152 250 1.2E-27 T 22-04-2016 IPR009671 Regulator of ribonuclease activity B domain AMK43_RS03165 d725cbd89442ee9831423bf8464ccc24 183 SUPERFAMILY SSF48371 73 172 7.53E-5 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMK43_RS06430 f4e7771d8b708a23d57961024eb4adb1 313 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 9 19 - T 22-04-2016 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 AMK43_RS06430 f4e7771d8b708a23d57961024eb4adb1 313 SUPERFAMILY SSF53590 4 306 1.12E-103 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK43_RS06430 f4e7771d8b708a23d57961024eb4adb1 313 Gene3D G3DSA:3.90.245.10 1 308 5.3E-110 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK43_RS06430 f4e7771d8b708a23d57961024eb4adb1 313 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 5 300 9.4E-78 T 22-04-2016 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain AMK43_RS06430 f4e7771d8b708a23d57961024eb4adb1 313 PANTHER PTHR12304 1 313 1.9E-117 T 22-04-2016 IPR023186 Inosine/uridine-preferring nucleoside hydrolase AMK43_RS06430 f4e7771d8b708a23d57961024eb4adb1 313 PANTHER PTHR12304:SF19 1 313 1.9E-117 T 22-04-2016 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 Hamap MF_00309 V-type ATP synthase alpha chain [atpA]. 1 567 48.99 T 22-04-2016 IPR022878 V-type ATP synthase catalytic alpha chain GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 5 50 2.2E-8 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 193 416 1.6E-94 T 22-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 PANTHER PTHR15184:SF7 163 563 3.8E-253 T 22-04-2016 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 PANTHER PTHR15184:SF7 113 118 3.8E-253 T 22-04-2016 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 PANTHER PTHR15184:SF7 1 75 3.8E-253 T 22-04-2016 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 SUPERFAMILY SSF52540 159 419 3.42E-80 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 SUPERFAMILY SSF47917 429 516 3.4E-23 T 22-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 PANTHER PTHR15184 163 563 3.8E-253 T 22-04-2016 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 PANTHER PTHR15184 113 118 3.8E-253 T 22-04-2016 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 PANTHER PTHR15184 1 75 3.8E-253 T 22-04-2016 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 Gene3D G3DSA:1.10.1140.10 523 570 1.0E-25 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 Gene3D G3DSA:1.10.1140.10 426 487 1.0E-25 T 22-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 SUPERFAMILY SSF50615 1 53 9.42E-7 T 22-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 Gene3D G3DSA:3.40.50.300 133 416 2.8E-105 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 407 416 - T 22-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS05225 74f487e14984ffd921c559032df128e8 572 Pfam PF16886 ATPsynthase alpha/beta subunit N-term extension 66 184 1.6E-44 T 22-04-2016 IPR031686 ATPsynthase alpha/beta subunit, N-terminal extension KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 AMK43_RS04850 5753f0247893ec5087feac78afa34922 476 TIGRFAM TIGR04370 glyco_rpt_poly: oligosaccharide repeat unit polymerase 97 430 2.4E-13 T 22-04-2016 AMK43_RS04850 5753f0247893ec5087feac78afa34922 476 Pfam PF14296 O-antigen polysaccharide polymerase Wzy 13 451 3.0E-57 T 22-04-2016 IPR029468 O-antigen polysaccharide polymerase Wzy UniPathway: UPA00934 AMK43_RS05530 9acbb94ad1ec63f975d0d412e9f9fd6b 2384 Pfam PF03797 Autotransporter beta-domain 2102 2370 6.6E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS05530 9acbb94ad1ec63f975d0d412e9f9fd6b 2384 SMART SM00869 2101 2376 3.0E-10 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS05530 9acbb94ad1ec63f975d0d412e9f9fd6b 2384 Gene3D G3DSA:2.40.128.130 2066 2381 2.9E-27 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS05530 9acbb94ad1ec63f975d0d412e9f9fd6b 2384 SUPERFAMILY SSF103515 2068 2381 2.09E-21 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS00515 db51dc2dbaf23b409fb671036986c787 185 PANTHER PTHR30037 4 185 9.2E-102 T 22-04-2016 AMK43_RS00515 db51dc2dbaf23b409fb671036986c787 185 SUPERFAMILY SSF48150 5 184 3.53E-76 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK43_RS00515 db51dc2dbaf23b409fb671036986c787 185 PANTHER PTHR30037:SF4 4 185 9.2E-102 T 22-04-2016 AMK43_RS00515 db51dc2dbaf23b409fb671036986c787 185 Pfam PF03352 Methyladenine glycosylase 14 182 6.1E-81 T 22-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 AMK43_RS00515 db51dc2dbaf23b409fb671036986c787 185 Gene3D G3DSA:1.10.340.30 5 183 8.5E-81 T 22-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 AMK43_RS07210 bbbc0f096f954ebcd1943dc9dba6d92b 114 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 57 109 2.1E-7 T 22-04-2016 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter AMK43_RS06405 1f3be6105f8caadb1e3b7124f16769c2 243 PANTHER PTHR30352:SF13 1 243 2.3E-85 T 22-04-2016 AMK43_RS06405 1f3be6105f8caadb1e3b7124f16769c2 243 ProSitePatterns PS01087 Radical activating enzymes signature. 16 37 - T 22-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 AMK43_RS06405 1f3be6105f8caadb1e3b7124f16769c2 243 SUPERFAMILY SSF102114 23 198 1.44E-19 T 22-04-2016 AMK43_RS06405 1f3be6105f8caadb1e3b7124f16769c2 243 Pfam PF13353 4Fe-4S single cluster domain 14 141 1.4E-17 T 22-04-2016 AMK43_RS06405 1f3be6105f8caadb1e3b7124f16769c2 243 PANTHER PTHR30352 1 243 2.3E-85 T 22-04-2016 AMK43_RS06405 1f3be6105f8caadb1e3b7124f16769c2 243 Gene3D G3DSA:3.80.30.10 72 241 4.1E-42 T 22-04-2016 AMK43_RS06405 1f3be6105f8caadb1e3b7124f16769c2 243 Pfam PF04055 Radical SAM superfamily 23 181 3.0E-19 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS09740 b428c3671ea62a6f1fe08f5a2823a597 349 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 5 349 6.1E-173 T 22-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 AMK43_RS09740 b428c3671ea62a6f1fe08f5a2823a597 349 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 3 349 5.7E-169 T 22-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 AMK43_RS01965 448af985c68f28bc9c59fffa5a7d778c 278 SUPERFAMILY SSF81345 4 267 2.88E-26 T 22-04-2016 IPR029022 ABC transporter, BtuC-like AMK43_RS01965 448af985c68f28bc9c59fffa5a7d778c 278 PANTHER PTHR30477:SF0 1 271 2.8E-64 T 22-04-2016 AMK43_RS01965 448af985c68f28bc9c59fffa5a7d778c 278 Pfam PF00950 ABC 3 transport family 9 269 5.8E-58 T 22-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 AMK43_RS01965 448af985c68f28bc9c59fffa5a7d778c 278 PANTHER PTHR30477 1 271 2.8E-64 T 22-04-2016 AMK43_RS06770 ce9edb37e2ad53841697d3825f478c5f 220 SMART SM00347 26 123 1.0E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS06770 ce9edb37e2ad53841697d3825f478c5f 220 PANTHER PTHR18964 31 220 1.4E-23 T 22-04-2016 AMK43_RS06770 ce9edb37e2ad53841697d3825f478c5f 220 PANTHER PTHR18964:SF125 31 220 1.4E-23 T 22-04-2016 AMK43_RS06770 ce9edb37e2ad53841697d3825f478c5f 220 Pfam PF01047 MarR family 31 88 1.3E-8 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS06770 ce9edb37e2ad53841697d3825f478c5f 220 Gene3D G3DSA:1.10.10.10 8 141 1.2E-28 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS06770 ce9edb37e2ad53841697d3825f478c5f 220 SUPERFAMILY SSF46785 14 141 6.18E-23 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS06770 ce9edb37e2ad53841697d3825f478c5f 220 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 79 1.7E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS06770 ce9edb37e2ad53841697d3825f478c5f 220 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 99 1.7E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS06770 ce9edb37e2ad53841697d3825f478c5f 220 PRINTS PR00598 Bacterial regulatory protein MarR family signature 47 63 1.7E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS06770 ce9edb37e2ad53841697d3825f478c5f 220 PRINTS PR00598 Bacterial regulatory protein MarR family signature 113 133 1.7E-5 T 22-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 AMK43_RS00425 43485345cca3510336b0a53a71517313 111 Gene3D G3DSA:3.90.470.10 2 110 5.9E-42 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00425 43485345cca3510336b0a53a71517313 111 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 28.315 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AMK43_RS00425 43485345cca3510336b0a53a71517313 111 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.4E-44 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AMK43_RS00425 43485345cca3510336b0a53a71517313 111 PANTHER PTHR13501 3 109 1.1E-45 T 22-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 AMK43_RS00425 43485345cca3510336b0a53a71517313 111 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 1.0E-31 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00425 43485345cca3510336b0a53a71517313 111 SUPERFAMILY SSF54843 2 110 9.68E-43 T 22-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 AMK43_RS00425 43485345cca3510336b0a53a71517313 111 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 22-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS09065 e43dce9abe840db8221eba36ad3506ec 300 SUPERFAMILY SSF161098 60 290 8.5E-57 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09065 e43dce9abe840db8221eba36ad3506ec 300 PANTHER PTHR30193 17 300 2.4E-83 T 22-04-2016 AMK43_RS09065 e43dce9abe840db8221eba36ad3506ec 300 Gene3D G3DSA:1.10.3720.10 66 297 8.2E-58 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09065 e43dce9abe840db8221eba36ad3506ec 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 291 1.1E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09065 e43dce9abe840db8221eba36ad3506ec 300 PANTHER PTHR30193:SF6 17 300 2.4E-83 T 22-04-2016 AMK43_RS01525 0b1b7f63215254b97a05bd1a61251193 224 PANTHER PTHR30471 1 224 3.6E-63 T 22-04-2016 AMK43_RS01525 0b1b7f63215254b97a05bd1a61251193 224 Gene3D G3DSA:3.40.140.10 101 223 4.3E-42 T 22-04-2016 AMK43_RS01525 0b1b7f63215254b97a05bd1a61251193 224 Pfam PF04002 RadC-like JAB domain 104 221 6.5E-40 T 22-04-2016 IPR025657 RadC-like JAB domain AMK43_RS01525 0b1b7f63215254b97a05bd1a61251193 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 10 224 1.9E-49 T 22-04-2016 IPR001405 RadC protein AMK43_RS09035 205373555256b76d9849e1ec920c8454 230 PANTHER PTHR36204:SF1 1 230 5.9E-101 T 22-04-2016 AMK43_RS09035 205373555256b76d9849e1ec920c8454 230 Gene3D G3DSA:3.20.20.70 1 230 1.0E-95 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS09035 205373555256b76d9849e1ec920c8454 230 SUPERFAMILY SSF51366 9 227 5.18E-55 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK43_RS09035 205373555256b76d9849e1ec920c8454 230 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 34 230 1.3E-77 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 AMK43_RS09035 205373555256b76d9849e1ec920c8454 230 PANTHER PTHR36204 1 230 5.9E-101 T 22-04-2016 AMK43_RS09035 205373555256b76d9849e1ec920c8454 230 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 8 230 40.348 T 22-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 AMK43_RS02380 6ec8bf79f08f248120114a455ce22116 139 PANTHER PTHR30558 1 138 4.4E-21 T 22-04-2016 AMK43_RS02380 6ec8bf79f08f248120114a455ce22116 139 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 135 1.2E-20 T 22-04-2016 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 AMK43_RS02380 6ec8bf79f08f248120114a455ce22116 139 PANTHER PTHR30558:SF3 1 138 4.4E-21 T 22-04-2016 AMK43_RS07160 f3587bdc303df6004696b6f31c26e41e 346 Pfam PF16258 Domain of unknown function (DUF4912) 154 261 4.0E-21 T 22-04-2016 IPR032585 Protein of unknown function DUF4912 AMK43_RS03170 623854f0175861bff27a8112efd64954 191 Pfam PF14124 Domain of unknown function (DUF4291) 14 189 1.3E-69 T 22-04-2016 IPR025633 Protein of unknown function DUF4291 AMK43_RS03170 623854f0175861bff27a8112efd64954 191 PANTHER PTHR38567 5 189 5.7E-68 T 22-04-2016 AMK43_RS00795 25a107385cc6b6b334bf6c301b6e985a 163 SUPERFAMILY SSF51735 2 111 3.38E-18 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS00795 25a107385cc6b6b334bf6c301b6e985a 163 Gene3D G3DSA:3.40.50.720 2 112 2.2E-29 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS00795 25a107385cc6b6b334bf6c301b6e985a 163 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 3 152 3.8E-25 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK43_RS00795 25a107385cc6b6b334bf6c301b6e985a 163 Pfam PF13241 Putative NAD(P)-binding 5 118 3.7E-26 T 22-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 AMK43_RS00795 25a107385cc6b6b334bf6c301b6e985a 163 PANTHER PTHR35330 1 153 1.0E-34 T 22-04-2016 AMK43_RS03340 3b3033dbf44bb9d5e3482b14eb4a97e9 203 Gene3D G3DSA:1.10.287.950 109 194 8.4E-4 T 22-04-2016 AMK43_RS03340 3b3033dbf44bb9d5e3482b14eb4a97e9 203 Gene3D G3DSA:1.10.1660.10 3 67 2.5E-4 T 22-04-2016 AMK43_RS04490 982d26f89340ec4fa4fb66eae3d6ad30 181 SUPERFAMILY SSF49879 61 162 1.26E-15 T 22-04-2016 IPR008984 SMAD/FHA domain GO:0005515 AMK43_RS04490 982d26f89340ec4fa4fb66eae3d6ad30 181 Gene3D G3DSA:2.60.200.20 65 160 9.2E-13 T 22-04-2016 IPR000253 Forkhead-associated (FHA) domain GO:0005515 AMK43_RS04490 982d26f89340ec4fa4fb66eae3d6ad30 181 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 69 160 1.0E-8 T 22-04-2016 IPR032030 YscD, cytoplasmic domain AMK43_RS02230 945cb819d232a21bff10d2d15f6a36a4 262 PANTHER PTHR30151:SF20 17 258 7.7E-94 T 22-04-2016 AMK43_RS02230 945cb819d232a21bff10d2d15f6a36a4 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 253 1.3E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS02230 945cb819d232a21bff10d2d15f6a36a4 262 SUPERFAMILY SSF161098 62 248 2.49E-27 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS02230 945cb819d232a21bff10d2d15f6a36a4 262 Gene3D G3DSA:1.10.3720.10 60 257 1.1E-20 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS02230 945cb819d232a21bff10d2d15f6a36a4 262 PANTHER PTHR30151 17 258 7.7E-94 T 22-04-2016 AMK43_RS02900 f0a5c4fbc99d344884d2695afbc1a907 278 PANTHER PTHR33514:SF1 13 271 6.8E-86 T 22-04-2016 AMK43_RS02900 f0a5c4fbc99d344884d2695afbc1a907 278 PANTHER PTHR33514 13 271 6.8E-86 T 22-04-2016 AMK43_RS02900 f0a5c4fbc99d344884d2695afbc1a907 278 Pfam PF02361 Cobalt transport protein 13 234 3.3E-29 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component AMK43_RS00835 9090eed5f2096a1ee4ba9cf339c31eff 214 Gene3D G3DSA:3.40.50.10230 3 211 1.0E-76 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 AMK43_RS00835 9090eed5f2096a1ee4ba9cf339c31eff 214 SUPERFAMILY SSF63965 9 211 1.2E-64 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 AMK43_RS00835 9090eed5f2096a1ee4ba9cf339c31eff 214 Pfam PF02570 Precorrin-8X methylmutase 10 206 6.2E-72 T 22-04-2016 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 AMK43_RS00835 9090eed5f2096a1ee4ba9cf339c31eff 214 PANTHER PTHR32439 1 212 2.6E-65 T 22-04-2016 AMK43_RS05055 43395d17ba151760647669046cefe9e7 183 PANTHER PTHR33693:SF1 2 183 9.2E-22 T 22-04-2016 AMK43_RS05055 43395d17ba151760647669046cefe9e7 183 Pfam PF03167 Uracil DNA glycosylase superfamily 27 172 4.7E-14 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK43_RS05055 43395d17ba151760647669046cefe9e7 183 Gene3D G3DSA:3.40.470.10 2 171 2.6E-32 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK43_RS05055 43395d17ba151760647669046cefe9e7 183 SUPERFAMILY SSF52141 3 175 2.29E-26 T 22-04-2016 IPR005122 Uracil-DNA glycosylase-like AMK43_RS05055 43395d17ba151760647669046cefe9e7 183 PANTHER PTHR33693 2 183 9.2E-22 T 22-04-2016 AMK43_RS07390 ffbad25d302a8cb95099670672593585 427 PANTHER PTHR30576:SF0 233 426 2.3E-96 T 22-04-2016 AMK43_RS07390 ffbad25d302a8cb95099670672593585 427 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 37 426 3.0E-100 T 22-04-2016 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase AMK43_RS07390 ffbad25d302a8cb95099670672593585 427 Pfam PF02397 Bacterial sugar transferase 240 422 1.5E-56 T 22-04-2016 IPR003362 Bacterial sugar transferase AMK43_RS07390 ffbad25d302a8cb95099670672593585 427 PANTHER PTHR30576 233 426 2.3E-96 T 22-04-2016 AMK43_RS09485 32777e4ab1960654051c7fd7cd41975d 317 PANTHER PTHR30465 1 317 1.0E-86 T 22-04-2016 AMK43_RS09485 32777e4ab1960654051c7fd7cd41975d 317 SUPERFAMILY SSF161098 90 299 3.66E-21 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09485 32777e4ab1960654051c7fd7cd41975d 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 315 6.3E-32 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS09485 32777e4ab1960654051c7fd7cd41975d 317 PANTHER PTHR30465:SF24 1 317 1.0E-86 T 22-04-2016 AMK43_RS09485 32777e4ab1960654051c7fd7cd41975d 317 Gene3D G3DSA:1.10.3720.10 89 313 3.0E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00605 4fb1bcc6e3ad63086fddcb30df8b2dfb 333 Pfam PF13391 HNH endonuclease 231 283 1.6E-6 T 22-04-2016 IPR003615 HNH nuclease AMK43_RS08360 0464b24bdcb43f154b377db63a129a07 265 SUPERFAMILY SSF53474 43 251 9.32E-18 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS08360 0464b24bdcb43f154b377db63a129a07 265 Gene3D G3DSA:3.40.50.1820 45 265 3.3E-24 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS08360 0464b24bdcb43f154b377db63a129a07 265 PANTHER PTHR37946 1 265 1.5E-37 T 22-04-2016 AMK43_RS08360 0464b24bdcb43f154b377db63a129a07 265 PANTHER PTHR37946:SF1 1 265 1.5E-37 T 22-04-2016 AMK43_RS08360 0464b24bdcb43f154b377db63a129a07 265 Pfam PF05057 Putative serine esterase (DUF676) 44 142 2.8E-5 T 22-04-2016 IPR007751 Domain of unknown function DUF676, lipase-like AMK43_RS08560 5b9fff91f857edb04eb50743af46a933 444 PANTHER PTHR37324:SF2 1 443 1.7E-159 T 22-04-2016 AMK43_RS08560 5b9fff91f857edb04eb50743af46a933 444 PIRSF PIRSF006304 2 444 4.3E-135 T 22-04-2016 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 AMK43_RS08560 5b9fff91f857edb04eb50743af46a933 444 PANTHER PTHR37324 1 443 1.7E-159 T 22-04-2016 AMK43_RS08560 5b9fff91f857edb04eb50743af46a933 444 Pfam PF03611 PTS system sugar-specific permease component 8 386 2.6E-65 T 22-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 AMK43_RS03920 20375f5e6c145a449a8f564a9bb774ec 2118 Pfam PF03797 Autotransporter beta-domain 1836 2104 8.6E-32 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS03920 20375f5e6c145a449a8f564a9bb774ec 2118 SMART SM00869 1835 2110 3.7E-9 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS03920 20375f5e6c145a449a8f564a9bb774ec 2118 Gene3D G3DSA:2.40.128.130 1800 2115 1.9E-27 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS03920 20375f5e6c145a449a8f564a9bb774ec 2118 SUPERFAMILY SSF103515 1804 2115 6.41E-22 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS02055 aba42865fe27169af9618fbb250bf425 321 SUPERFAMILY SSF69304 69 208 2.09E-7 T 22-04-2016 AMK43_RS02055 aba42865fe27169af9618fbb250bf425 321 Gene3D G3DSA:2.120.10.60 80 198 8.8E-4 T 22-04-2016 AMK43_RS11040 1d995f4ec8151b1830cdb74d940ed11a 660 Pfam PF09491 AlwI restriction endonuclease 88 619 1.8E-100 T 22-04-2016 IPR018573 Restriction endonuclease, type II, AlwI AMK43_RS03035 372a917f3ece1ca11b4ec31881fbc12a 287 PIRSF PIRSF000097 1 278 1.8E-96 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK43_RS03035 372a917f3ece1ca11b4ec31881fbc12a 287 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 137 154 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMK43_RS03035 372a917f3ece1ca11b4ec31881fbc12a 287 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 43 60 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMK43_RS03035 372a917f3ece1ca11b4ec31881fbc12a 287 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 241 256 - T 22-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 AMK43_RS03035 372a917f3ece1ca11b4ec31881fbc12a 287 PANTHER PTHR11732 4 269 1.8E-147 T 22-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta AMK43_RS03035 372a917f3ece1ca11b4ec31881fbc12a 287 Pfam PF00248 Aldo/keto reductase family 19 271 5.2E-54 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMK43_RS03035 372a917f3ece1ca11b4ec31881fbc12a 287 PRINTS PR00069 Aldo-keto reductase signature 208 232 1.5E-51 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK43_RS03035 372a917f3ece1ca11b4ec31881fbc12a 287 PRINTS PR00069 Aldo-keto reductase signature 137 154 1.5E-51 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK43_RS03035 372a917f3ece1ca11b4ec31881fbc12a 287 PRINTS PR00069 Aldo-keto reductase signature 39 63 1.5E-51 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK43_RS03035 372a917f3ece1ca11b4ec31881fbc12a 287 PRINTS PR00069 Aldo-keto reductase signature 171 200 1.5E-51 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK43_RS03035 372a917f3ece1ca11b4ec31881fbc12a 287 PRINTS PR00069 Aldo-keto reductase signature 99 117 1.5E-51 T 22-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 AMK43_RS03035 372a917f3ece1ca11b4ec31881fbc12a 287 Gene3D G3DSA:3.20.20.100 6 274 6.4E-111 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMK43_RS03035 372a917f3ece1ca11b4ec31881fbc12a 287 SUPERFAMILY SSF51430 6 272 4.19E-96 T 22-04-2016 IPR023210 NADP-dependent oxidoreductase domain AMK43_RS08150 a597855fff6d7d3df93dd2d0ffe4a143 284 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 12 217 4.7E-57 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT AMK43_RS08150 a597855fff6d7d3df93dd2d0ffe4a143 284 PIRSF PIRSF006483 1 284 1.6E-75 T 22-04-2016 IPR003740 Uncharacterised membrane protein YitT AMK43_RS08150 a597855fff6d7d3df93dd2d0ffe4a143 284 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 223 277 2.4E-19 T 22-04-2016 IPR019264 Domain of unknown function DUF2179 AMK43_RS08150 a597855fff6d7d3df93dd2d0ffe4a143 284 PANTHER PTHR33545:SF1 10 284 6.3E-82 T 22-04-2016 AMK43_RS08150 a597855fff6d7d3df93dd2d0ffe4a143 284 PANTHER PTHR33545 10 284 6.3E-82 T 22-04-2016 AMK43_RS03370 78fce8bf2be3d99ef7bfcfb7c9f5c7bb 172 SUPERFAMILY SSF51161 3 169 1.21E-48 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK43_RS03370 78fce8bf2be3d99ef7bfcfb7c9f5c7bb 172 PANTHER PTHR13061 1 167 1.2E-63 T 22-04-2016 AMK43_RS03370 78fce8bf2be3d99ef7bfcfb7c9f5c7bb 172 Gene3D G3DSA:2.160.10.10 3 168 6.6E-47 T 22-04-2016 AMK43_RS03370 78fce8bf2be3d99ef7bfcfb7c9f5c7bb 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 122 4.7E-9 T 22-04-2016 IPR001451 Hexapeptide repeat AMK43_RS10905 b5ecb9fb0148df5786f1c436e9f0e31c 268 Pfam PF11299 Protein of unknown function (DUF3100) 18 256 1.4E-84 T 22-04-2016 IPR021450 Protein of unknown function DUF3100 AMK43_RS04800 31331d99d6c6e7632024f06c9f7bc433 264 PANTHER PTHR30388 2 264 5.0E-70 T 22-04-2016 AMK43_RS04800 31331d99d6c6e7632024f06c9f7bc433 264 Gene3D G3DSA:3.40.50.720 104 200 7.8E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS04800 31331d99d6c6e7632024f06c9f7bc433 264 Pfam PF13478 XdhC Rossmann domain 107 249 8.5E-38 T 22-04-2016 IPR027051 XdhC Rossmann domain AMK43_RS04800 31331d99d6c6e7632024f06c9f7bc433 264 Pfam PF02625 XdhC and CoxI family 14 74 2.5E-19 T 22-04-2016 IPR003777 XdhC- CoxI AMK43_RS04800 31331d99d6c6e7632024f06c9f7bc433 264 PANTHER PTHR30388:SF4 2 264 5.0E-70 T 22-04-2016 AMK43_RS04800 31331d99d6c6e7632024f06c9f7bc433 264 SUPERFAMILY SSF51735 97 191 2.04E-5 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS01935 299bfc22444462b4f0dd9f9464bd3f92 101 Pfam PF03891 Domain of unknown function (DUF333) 53 98 6.8E-20 T 22-04-2016 IPR005590 Protein of unknown function DUF333 AMK43_RS01935 299bfc22444462b4f0dd9f9464bd3f92 101 PANTHER PTHR38008 45 99 8.2E-15 T 22-04-2016 AMK43_RS01935 299bfc22444462b4f0dd9f9464bd3f92 101 PANTHER PTHR38008:SF2 45 99 8.2E-15 T 22-04-2016 AMK43_RS09145 73477bd860e79b7dce151d6f14ffca76 181 SUPERFAMILY SSF56300 6 180 8.54E-21 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS09145 73477bd860e79b7dce151d6f14ffca76 181 Gene3D G3DSA:3.60.21.10 5 169 4.7E-13 T 22-04-2016 IPR029052 Metallo-dependent phosphatase-like AMK43_RS09145 73477bd860e79b7dce151d6f14ffca76 181 Pfam PF00149 Calcineurin-like phosphoesterase 11 152 5.6E-4 T 22-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 AMK43_RS10045 a1eaf99d80525c20784e7d67da6f0ea3 207 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 207 1.1E-86 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 AMK43_RS10045 a1eaf99d80525c20784e7d67da6f0ea3 207 Gene3D G3DSA:3.40.50.2020 3 207 1.3E-80 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS10045 a1eaf99d80525c20784e7d67da6f0ea3 207 Pfam PF14681 Uracil phosphoribosyltransferase 7 206 9.1E-73 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS10045 a1eaf99d80525c20784e7d67da6f0ea3 207 SUPERFAMILY SSF53271 3 205 1.31E-68 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS10045 a1eaf99d80525c20784e7d67da6f0ea3 207 PANTHER PTHR10285 1 196 2.4E-93 T 22-04-2016 AMK43_RS10045 a1eaf99d80525c20784e7d67da6f0ea3 207 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 207 45.417 T 22-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 AMK43_RS11415 9670ea05ff31bbbf68065363f3afdb82 273 Gene3D G3DSA:1.10.510.10 146 220 3.1E-5 T 22-04-2016 AMK43_RS11415 9670ea05ff31bbbf68065363f3afdb82 273 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 85 220 2.8E-8 T 22-04-2016 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 AMK43_RS11415 9670ea05ff31bbbf68065363f3afdb82 273 SUPERFAMILY SSF56112 79 202 7.05E-6 T 22-04-2016 IPR011009 Protein kinase-like domain AMK43_RS07045 e15ba3552a6bd6bdb14333f5bd9699d0 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 24.744 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS07045 e15ba3552a6bd6bdb14333f5bd9699d0 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 1.9E-35 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 AMK43_RS07045 e15ba3552a6bd6bdb14333f5bd9699d0 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 3.0E-31 T 22-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 AMK43_RS07045 e15ba3552a6bd6bdb14333f5bd9699d0 102 SUPERFAMILY SSF141091 1 101 3.27E-33 T 22-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 AMK43_RS07045 e15ba3552a6bd6bdb14333f5bd9699d0 102 PANTHER PTHR21349 1 100 2.2E-34 T 22-04-2016 AMK43_RS02410 94200ecd2831bea656f452bd87484aa0 96 Pfam PF10615 Protein of unknown function (DUF2470) 4 74 1.5E-11 T 22-04-2016 IPR019595 Domain of unknown function DUF2470 AMK43_RS02410 94200ecd2831bea656f452bd87484aa0 96 Gene3D G3DSA:3.20.180.10 3 83 1.1E-11 T 22-04-2016 IPR019595 Domain of unknown function DUF2470 AMK43_RS05290 2fbbba5fb3087ceab13b86a57f458824 301 Gene3D G3DSA:1.25.40.10 25 133 1.6E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS05290 2fbbba5fb3087ceab13b86a57f458824 301 SUPERFAMILY SSF48452 23 139 2.76E-6 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS07650 4a0116d6e7b03eaa19a131ae4275d39b 144 Pfam PF00572 Ribosomal protein L13 16 140 8.9E-57 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMK43_RS07650 4a0116d6e7b03eaa19a131ae4275d39b 144 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 142 6.2E-60 T 22-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 AMK43_RS07650 4a0116d6e7b03eaa19a131ae4275d39b 144 PIRSF PIRSF002181 1 143 1.2E-49 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMK43_RS07650 4a0116d6e7b03eaa19a131ae4275d39b 144 Gene3D G3DSA:3.90.1180.10 5 143 8.5E-62 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 AMK43_RS07650 4a0116d6e7b03eaa19a131ae4275d39b 144 PANTHER PTHR11545 5 144 1.3E-69 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMK43_RS07650 4a0116d6e7b03eaa19a131ae4275d39b 144 SUPERFAMILY SSF52161 7 143 1.19E-56 T 22-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 AMK43_RS07650 4a0116d6e7b03eaa19a131ae4275d39b 144 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 17 143 27.926 T 22-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 AMK43_RS09410 4ec7c1e2c38db3c98994a1c38a2714a6 367 PANTHER PTHR22604 297 367 9.8E-172 T 22-04-2016 AMK43_RS09410 4ec7c1e2c38db3c98994a1c38a2714a6 367 PANTHER PTHR22604 4 276 9.8E-172 T 22-04-2016 AMK43_RS09410 4ec7c1e2c38db3c98994a1c38a2714a6 367 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 132 241 3.9E-14 T 22-04-2016 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 AMK43_RS09410 4ec7c1e2c38db3c98994a1c38a2714a6 367 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 120 8.1E-28 T 22-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 AMK43_RS09410 4ec7c1e2c38db3c98994a1c38a2714a6 367 Gene3D G3DSA:3.40.50.720 1 137 2.9E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS09410 4ec7c1e2c38db3c98994a1c38a2714a6 367 SUPERFAMILY SSF51735 4 148 1.64E-43 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS09410 4ec7c1e2c38db3c98994a1c38a2714a6 367 PANTHER PTHR22604:SF135 297 367 9.8E-172 T 22-04-2016 AMK43_RS09410 4ec7c1e2c38db3c98994a1c38a2714a6 367 PANTHER PTHR22604:SF135 4 276 9.8E-172 T 22-04-2016 AMK43_RS09410 4ec7c1e2c38db3c98994a1c38a2714a6 367 SUPERFAMILY SSF55347 127 268 4.91E-28 T 22-04-2016 AMK43_RS09410 4ec7c1e2c38db3c98994a1c38a2714a6 367 Gene3D G3DSA:3.30.360.10 138 254 1.4E-27 T 22-04-2016 AMK43_RS09410 4ec7c1e2c38db3c98994a1c38a2714a6 367 Gene3D G3DSA:3.30.360.10 304 364 1.4E-27 T 22-04-2016 AMK43_RS00785 b4166976839693fd22bb912718f5f0fe 461 SUPERFAMILY SSF54675 5 135 2.55E-25 T 22-04-2016 AMK43_RS00785 b4166976839693fd22bb912718f5f0fe 461 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 8 394 1.1E-100 T 22-04-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 AMK43_RS00785 b4166976839693fd22bb912718f5f0fe 461 PIRSF PIRSF000484 2 459 7.4E-103 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 AMK43_RS00785 b4166976839693fd22bb912718f5f0fe 461 PANTHER PTHR11098 11 459 4.1E-118 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 AMK43_RS00785 b4166976839693fd22bb912718f5f0fe 461 SUPERFAMILY SSF51690 138 456 2.88E-69 T 22-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 AMK43_RS00785 b4166976839693fd22bb912718f5f0fe 461 PANTHER PTHR11098:SF13 11 459 4.1E-118 T 22-04-2016 AMK43_RS00785 b4166976839693fd22bb912718f5f0fe 461 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 156 358 3.2E-7 T 22-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 AMK43_RS00785 b4166976839693fd22bb912718f5f0fe 461 Gene3D G3DSA:3.20.140.10 5 386 2.9E-80 T 22-04-2016 AMK43_RS03200 765b28aa9c221339946e72c60a32c21b 440 PANTHER PTHR30563 102 427 2.1E-64 T 22-04-2016 AMK43_RS03200 765b28aa9c221339946e72c60a32c21b 440 Pfam PF02646 RmuC family 148 426 1.5E-62 T 22-04-2016 IPR003798 DNA recombination RmuC AMK43_RS10600 77539170f55b759562c15565e9677784 326 PANTHER PTHR30465 3 320 1.9E-118 T 22-04-2016 AMK43_RS10600 77539170f55b759562c15565e9677784 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 319 2.7E-36 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS10600 77539170f55b759562c15565e9677784 326 Gene3D G3DSA:1.10.3720.10 91 315 5.1E-17 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS10600 77539170f55b759562c15565e9677784 326 SUPERFAMILY SSF161098 92 302 1.21E-16 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS10600 77539170f55b759562c15565e9677784 326 PANTHER PTHR30465:SF74 3 320 1.9E-118 T 22-04-2016 AMK43_RS01315 7fe78a2f30222c2ce43459ee4a6108dd 242 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 36 223 8.4E-25 T 22-04-2016 IPR005519 Acid phosphatase, class B-like AMK43_RS01315 7fe78a2f30222c2ce43459ee4a6108dd 242 SUPERFAMILY SSF56784 34 240 3.36E-48 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS01315 7fe78a2f30222c2ce43459ee4a6108dd 242 Gene3D G3DSA:3.40.50.1000 24 240 4.1E-54 T 22-04-2016 IPR023214 HAD-like domain AMK43_RS01315 7fe78a2f30222c2ce43459ee4a6108dd 242 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 6 241 6.1E-82 T 22-04-2016 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00627+3.1.3.2|MetaCyc: PWY-6348 AMK43_RS10110 ca91789a0f7c8793680840504b40f15d 370 PANTHER PTHR21716 12 356 3.5E-50 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like AMK43_RS10110 ca91789a0f7c8793680840504b40f15d 370 Pfam PF01594 Domain of unknown function DUF20 82 354 3.6E-46 T 22-04-2016 IPR002549 Transmembrane protein TqsA-like AMK43_RS08775 57f0a1a629fc5cfac7e51ef16cbcc964 298 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 282 4.3E-46 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK43_RS08775 57f0a1a629fc5cfac7e51ef16cbcc964 298 PANTHER PTHR11795 5 298 3.3E-118 T 22-04-2016 AMK43_RS08775 57f0a1a629fc5cfac7e51ef16cbcc964 298 PANTHER PTHR11795:SF371 5 298 3.3E-118 T 22-04-2016 AMK43_RS10385 bde27fce930e93d4ed90d923946e4512 66 SUPERFAMILY SSF47413 5 62 1.1E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS10385 bde27fce930e93d4ed90d923946e4512 66 Gene3D G3DSA:1.10.260.40 6 61 2.9E-6 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS00305 62b15c30d8941709194ec74cdab241fd 285 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 282 9.3E-63 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS00305 62b15c30d8941709194ec74cdab241fd 285 SUPERFAMILY SSF56176 2 180 2.34E-33 T 22-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 AMK43_RS00305 62b15c30d8941709194ec74cdab241fd 285 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 285 68.509 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS00305 62b15c30d8941709194ec74cdab241fd 285 Gene3D G3DSA:3.30.43.10 8 58 4.6E-5 T 22-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 AMK43_RS00305 62b15c30d8941709194ec74cdab241fd 285 Pfam PF01565 FAD binding domain 39 151 1.8E-16 T 22-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 AMK43_RS00305 62b15c30d8941709194ec74cdab241fd 285 Gene3D G3DSA:3.90.78.10 211 283 4.9E-29 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS00305 62b15c30d8941709194ec74cdab241fd 285 SUPERFAMILY SSF56194 188 282 7.32E-31 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS00305 62b15c30d8941709194ec74cdab241fd 285 PANTHER PTHR21071:SF4 1 285 6.1E-91 T 22-04-2016 AMK43_RS00305 62b15c30d8941709194ec74cdab241fd 285 Gene3D G3DSA:3.30.465.10 75 210 4.2E-44 T 22-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 AMK43_RS00305 62b15c30d8941709194ec74cdab241fd 285 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 189 281 2.4E-26 T 22-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS00305 62b15c30d8941709194ec74cdab241fd 285 PANTHER PTHR21071 1 285 6.1E-91 T 22-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS01510 2af2d7c450239d28d1f45661b6522c77 126 Pfam PF09403 Adhesion protein FadA 1 121 8.5E-29 T 22-04-2016 IPR018543 Adhesion protein FadA AMK43_RS06925 10d4824444e9cd4dfd48acbb158b3ac4 585 Gene3D G3DSA:2.40.440.10 429 562 3.3E-5 T 22-04-2016 AMK43_RS06925 10d4824444e9cd4dfd48acbb158b3ac4 585 Pfam PF03734 L,D-transpeptidase catalytic domain 431 566 2.0E-8 T 22-04-2016 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 UniPathway: UPA00219 AMK43_RS06925 10d4824444e9cd4dfd48acbb158b3ac4 585 SUPERFAMILY SSF141523 431 564 1.83E-8 T 22-04-2016 AMK43_RS01105 6dc495f7f4003a3e8e69e53098648d88 382 Gene3D G3DSA:3.40.640.10 1 243 3.4E-90 T 22-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 AMK43_RS01105 6dc495f7f4003a3e8e69e53098648d88 382 Gene3D G3DSA:3.90.1150.10 244 378 1.6E-45 T 22-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 AMK43_RS01105 6dc495f7f4003a3e8e69e53098648d88 382 SUPERFAMILY SSF53383 9 378 1.24E-110 T 22-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase AMK43_RS01105 6dc495f7f4003a3e8e69e53098648d88 382 PANTHER PTHR11808 1 381 4.0E-182 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK43_RS01105 6dc495f7f4003a3e8e69e53098648d88 382 PIRSF PIRSF001434 1 380 1.1E-139 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK43_RS01105 6dc495f7f4003a3e8e69e53098648d88 382 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 376 4.8E-143 T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK43_RS01105 6dc495f7f4003a3e8e69e53098648d88 382 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 22-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 AMK43_RS09625 64e686cbd41afe9a688cd2e08f9fef57 198 Pfam PF02517 CAAX protease self-immunity 60 142 4.1E-18 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 AMK43_RS01440 26b706802926866a0d01b22b291357e7 349 Gene3D G3DSA:2.40.160.20 303 348 9.8E-4 T 22-04-2016 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 AMK43_RS02355 151806475c6a013d9685fbe85b1a5159 920 SUPERFAMILY SSF52980 667 862 5.9E-5 T 22-04-2016 IPR011335 Restriction endonuclease type II-like AMK43_RS02355 151806475c6a013d9685fbe85b1a5159 920 Pfam PF12705 PD-(D/E)XK nuclease superfamily 669 878 2.4E-10 T 22-04-2016 AMK43_RS02635 6aa4295d3162a9a5765ad78d26a023da 293 Gene3D G3DSA:3.30.420.40 2 104 1.3E-35 T 22-04-2016 AMK43_RS02635 6aa4295d3162a9a5765ad78d26a023da 293 PANTHER PTHR18964:SF10 1 285 2.1E-89 T 22-04-2016 AMK43_RS02635 6aa4295d3162a9a5765ad78d26a023da 293 SUPERFAMILY SSF53067 3 289 4.38E-48 T 22-04-2016 AMK43_RS02635 6aa4295d3162a9a5765ad78d26a023da 293 Gene3D G3DSA:3.30.420.40 105 290 1.6E-74 T 22-04-2016 AMK43_RS02635 6aa4295d3162a9a5765ad78d26a023da 293 PANTHER PTHR18964 1 285 2.1E-89 T 22-04-2016 AMK43_RS02635 6aa4295d3162a9a5765ad78d26a023da 293 ProSitePatterns PS01125 ROK family signature. 130 155 - T 22-04-2016 IPR000600 ROK family AMK43_RS02635 6aa4295d3162a9a5765ad78d26a023da 293 Pfam PF00480 ROK family 5 285 1.3E-73 T 22-04-2016 IPR000600 ROK family AMK43_RS11330 0ec233af9ea59bae2530897ec43d3f28 384 Pfam PF15428 Immunity protein 26 164 275 4.4E-19 T 22-04-2016 IPR029278 Immunity protein 26 AMK43_RS10660 810dfe36d476eed546cf40cee9fa0180 87 Pfam PF03083 Sugar efflux transporter for intercellular exchange 9 83 4.0E-8 T 22-04-2016 IPR004316 SWEET sugar transporter GO:0016021 AMK43_RS07905 8951692c9737de35b2c0d0bc9f37edbc 365 PANTHER PTHR33529 1 364 1.6E-70 T 22-04-2016 AMK43_RS07905 8951692c9737de35b2c0d0bc9f37edbc 365 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 359 1.4E-68 T 22-04-2016 IPR005495 Permease LptG/LptF-related GO:0016021 AMK43_RS08575 e1db84c518d11e22a0612f647cbf37df 151 SUPERFAMILY SSF55804 2 149 1.57E-39 T 22-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 AMK43_RS08575 e1db84c518d11e22a0612f647cbf37df 151 PANTHER PTHR30505:SF2 1 149 2.9E-35 T 22-04-2016 AMK43_RS08575 e1db84c518d11e22a0612f647cbf37df 151 Gene3D G3DSA:3.40.930.10 1 149 4.2E-45 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS08575 e1db84c518d11e22a0612f647cbf37df 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 149 2.1E-37 T 22-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- AMK43_RS08575 e1db84c518d11e22a0612f647cbf37df 151 PANTHER PTHR30505 1 149 2.9E-35 T 22-04-2016 AMK43_RS01855 d62a2bd89d7ad0bc4b080a0c3340afa2 98 SUPERFAMILY SSF54913 1 78 2.13E-6 T 22-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta AMK43_RS05920 9356bf4aacca9ec5c544aad61fc26005 201 Gene3D G3DSA:3.40.630.30 17 163 2.3E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS05920 9356bf4aacca9ec5c544aad61fc26005 201 SUPERFAMILY SSF55729 17 154 2.57E-9 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS03750 39e6b4d07084f01bcab034fbc48bf24b 412 Pfam PF07613 Protein of unknown function (DUF1576) 31 203 1.5E-48 T 22-04-2016 IPR011470 Protein of unknown function DUF1576 AMK43_RS03750 39e6b4d07084f01bcab034fbc48bf24b 412 Pfam PF07613 Protein of unknown function (DUF1576) 242 405 1.1E-43 T 22-04-2016 IPR011470 Protein of unknown function DUF1576 AMK43_RS03955 f83c92a75a6b3386626ebe8f4324f412 267 Pfam PF02361 Cobalt transport protein 16 230 2.4E-11 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component AMK43_RS03955 f83c92a75a6b3386626ebe8f4324f412 267 PANTHER PTHR33514 9 267 1.2E-16 T 22-04-2016 AMK43_RS09450 e75a022675c7dd524eaf9d560ef8687d 520 SUPERFAMILY SSF53474 113 272 3.33E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS09450 e75a022675c7dd524eaf9d560ef8687d 520 SUPERFAMILY SSF53474 421 518 3.33E-17 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS09450 e75a022675c7dd524eaf9d560ef8687d 520 Gene3D G3DSA:3.40.50.1820 429 506 2.2E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS09450 e75a022675c7dd524eaf9d560ef8687d 520 Gene3D G3DSA:3.40.50.1820 82 268 2.2E-15 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS05140 f22a804a408b1f66798e4d6375512f7b 316 Pfam PF02618 YceG-like family 39 310 1.2E-60 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like AMK43_RS05140 f22a804a408b1f66798e4d6375512f7b 316 PANTHER PTHR30518:SF2 4 311 3.3E-54 T 22-04-2016 AMK43_RS05140 f22a804a408b1f66798e4d6375512f7b 316 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 2 310 2.7E-47 T 22-04-2016 IPR003770 Uncharacterised protein family UPF0755, YceG-like AMK43_RS05140 f22a804a408b1f66798e4d6375512f7b 316 PANTHER PTHR30518 4 311 3.3E-54 T 22-04-2016 AMK43_RS01835 2c56474492524d1e707a5aa5af2fe740 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 4.2E-15 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK43_RS01835 2c56474492524d1e707a5aa5af2fe740 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 9.7E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK43_RS01835 2c56474492524d1e707a5aa5af2fe740 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 9.7E-10 T 22-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 AMK43_RS01835 2c56474492524d1e707a5aa5af2fe740 202 Gene3D G3DSA:1.10.357.10 8 201 1.2E-30 T 22-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 AMK43_RS01835 2c56474492524d1e707a5aa5af2fe740 202 SUPERFAMILY SSF46689 8 76 2.67E-17 T 22-04-2016 IPR009057 Homeodomain-like GO:0003677 AMK43_RS01835 2c56474492524d1e707a5aa5af2fe740 202 PANTHER PTHR30055 7 201 4.4E-18 T 22-04-2016 AMK43_RS02015 cc02a5c3dae78d0553fad1d79084a438 528 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 71 241 1.7E-34 T 22-04-2016 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02015 cc02a5c3dae78d0553fad1d79084a438 528 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 269 286 - T 22-04-2016 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02015 cc02a5c3dae78d0553fad1d79084a438 528 PIRSF PIRSF006005 1 528 1.5E-206 T 22-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02015 cc02a5c3dae78d0553fad1d79084a438 528 PANTHER PTHR39191 16 528 9.7E-154 T 22-04-2016 AMK43_RS02015 cc02a5c3dae78d0553fad1d79084a438 528 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 528 225.323 T 22-04-2016 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02015 cc02a5c3dae78d0553fad1d79084a438 528 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 257 433 1.4E-27 T 22-04-2016 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|UniPathway: UPA00214 AMK43_RS02015 cc02a5c3dae78d0553fad1d79084a438 528 PANTHER PTHR39191:SF1 16 528 9.7E-154 T 22-04-2016 AMK43_RS11045 2abc62afbedbcb928e6366910bdcc998 513 Gene3D G3DSA:3.40.50.300 1 151 2.1E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11045 2abc62afbedbcb928e6366910bdcc998 513 Gene3D G3DSA:3.40.50.300 247 401 2.1E-34 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11045 2abc62afbedbcb928e6366910bdcc998 513 SUPERFAMILY SSF52540 1 396 7.46E-30 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS11045 2abc62afbedbcb928e6366910bdcc998 513 Pfam PF13175 AAA ATPase domain 1 380 8.6E-82 T 22-04-2016 AMK43_RS08420 e1341a88fbae0ae927641a0097a16dc7 339 SUPERFAMILY SSF51569 1 337 2.93E-110 T 22-04-2016 AMK43_RS08420 e1341a88fbae0ae927641a0097a16dc7 339 PANTHER PTHR21057:SF1 2 339 8.9E-165 T 22-04-2016 AMK43_RS08420 e1341a88fbae0ae927641a0097a16dc7 339 PANTHER PTHR21057 2 339 8.9E-165 T 22-04-2016 AMK43_RS08420 e1341a88fbae0ae927641a0097a16dc7 339 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 72 329 4.2E-118 T 22-04-2016 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 AMK43_RS08420 e1341a88fbae0ae927641a0097a16dc7 339 Gene3D G3DSA:3.20.20.70 73 336 3.4E-100 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS08420 e1341a88fbae0ae927641a0097a16dc7 339 Gene3D G3DSA:3.30.70.1140 1 71 6.9E-15 T 22-04-2016 AMK43_RS08420 e1341a88fbae0ae927641a0097a16dc7 339 Pfam PF00793 DAHP synthetase I family 88 326 1.3E-73 T 22-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 AMK43_RS08600 48479aaa7863bfc7cacff14070f23e3f 76 Pfam PF00872 Transposase, Mutator family 18 74 1.2E-5 T 22-04-2016 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 AMK43_RS09995 29f6b3dcc5fa9578cec6b0a8adf3ae76 183 SUPERFAMILY SSF48317 19 167 6.54E-43 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK43_RS09995 29f6b3dcc5fa9578cec6b0a8adf3ae76 183 SMART SM00014 61 171 3.4E-19 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK43_RS09995 29f6b3dcc5fa9578cec6b0a8adf3ae76 183 Pfam PF01569 PAP2 superfamily 65 168 8.3E-24 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK43_RS09995 29f6b3dcc5fa9578cec6b0a8adf3ae76 183 Gene3D G3DSA:1.20.144.10 17 168 2.8E-40 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK43_RS09995 29f6b3dcc5fa9578cec6b0a8adf3ae76 183 PANTHER PTHR14969 1 168 1.1E-35 T 22-04-2016 AMK43_RS09095 a587ccf8de8598585af69963a38b5b73 115 SUPERFAMILY SSF141488 39 104 7.19E-12 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor AMK43_RS09095 a587ccf8de8598585af69963a38b5b73 115 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 44 107 1.7E-12 T 22-04-2016 IPR018660 C-type lysozyme, inhibitor AMK43_RS01700 1b96ec364277f7ed9bcad65bf16950d9 215 Pfam PF01177 Asp/Glu/Hydantoin racemase 40 210 3.7E-11 T 22-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS01700 1b96ec364277f7ed9bcad65bf16950d9 215 SUPERFAMILY SSF53681 132 211 4.09E-10 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS01700 1b96ec364277f7ed9bcad65bf16950d9 215 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 181 191 - T 22-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS01700 1b96ec364277f7ed9bcad65bf16950d9 215 Gene3D G3DSA:3.40.50.1860 107 205 6.5E-11 T 22-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 AMK43_RS01100 6226afb13442978cdf78bdb30406ca1b 394 Gene3D G3DSA:3.30.1330.60 280 391 4.4E-39 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS01100 6226afb13442978cdf78bdb30406ca1b 394 SUPERFAMILY SSF103088 270 391 1.01E-34 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS01100 6226afb13442978cdf78bdb30406ca1b 394 Pfam PF00691 OmpA family 291 385 1.0E-23 T 22-04-2016 IPR006665 OmpA-like domain AMK43_RS01100 6226afb13442978cdf78bdb30406ca1b 394 PANTHER PTHR30128:SF16 82 391 8.3E-61 T 22-04-2016 AMK43_RS01100 6226afb13442978cdf78bdb30406ca1b 394 PRINTS PR01021 OMPA domain signature 292 314 3.7E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS01100 6226afb13442978cdf78bdb30406ca1b 394 PRINTS PR01021 OMPA domain signature 322 337 3.7E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS01100 6226afb13442978cdf78bdb30406ca1b 394 PRINTS PR01021 OMPA domain signature 337 353 3.7E-14 T 22-04-2016 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 AMK43_RS01100 6226afb13442978cdf78bdb30406ca1b 394 PANTHER PTHR30128 82 391 8.3E-61 T 22-04-2016 AMK43_RS01145 05e18429412dfeda1533b38f60803d6b 221 Pfam PF11738 Protein of unknown function (DUF3298) 140 198 2.6E-5 T 22-04-2016 IPR021729 Domain of unknown function DUF3298 AMK43_RS01145 05e18429412dfeda1533b38f60803d6b 221 Gene3D G3DSA:3.90.640.20 140 198 1.4E-5 T 22-04-2016 IPR021729 Domain of unknown function DUF3298 AMK43_RS10200 9e85455422a5453eeeaa1c37a8837cfb 359 SUPERFAMILY SSF51445 6 227 4.63E-53 T 22-04-2016 IPR017853 Glycoside hydrolase superfamily AMK43_RS10200 9e85455422a5453eeeaa1c37a8837cfb 359 PANTHER PTHR38435 5 357 3.9E-60 T 22-04-2016 AMK43_RS10200 9e85455422a5453eeeaa1c37a8837cfb 359 Gene3D G3DSA:2.40.100.10 234 356 6.6E-31 T 22-04-2016 IPR029000 Cyclophilin-like domain AMK43_RS10200 9e85455422a5453eeeaa1c37a8837cfb 359 PANTHER PTHR38435:SF2 5 357 3.9E-60 T 22-04-2016 AMK43_RS10200 9e85455422a5453eeeaa1c37a8837cfb 359 SUPERFAMILY SSF50891 235 353 8.72E-17 T 22-04-2016 IPR029000 Cyclophilin-like domain AMK43_RS10200 9e85455422a5453eeeaa1c37a8837cfb 359 Gene3D G3DSA:3.20.20.70 6 228 1.5E-62 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS10200 9e85455422a5453eeeaa1c37a8837cfb 359 Pfam PF05913 Bacterial protein of unknown function (DUF871) 7 352 1.3E-88 T 22-04-2016 IPR008589 Protein of unknown function DUF871, prokaryotic AMK43_RS06915 cedc9bebbc50cf58555629ff797bb9c5 311 Pfam PF01551 Peptidase family M23 174 219 1.9E-12 T 22-04-2016 IPR016047 Peptidase M23 AMK43_RS06915 cedc9bebbc50cf58555629ff797bb9c5 311 PANTHER PTHR21666 87 139 4.3E-17 T 22-04-2016 AMK43_RS06915 cedc9bebbc50cf58555629ff797bb9c5 311 PANTHER PTHR21666 155 247 4.3E-17 T 22-04-2016 AMK43_RS06915 cedc9bebbc50cf58555629ff797bb9c5 311 SUPERFAMILY SSF51261 40 131 9.42E-8 T 22-04-2016 IPR011055 Duplicated hybrid motif AMK43_RS06915 cedc9bebbc50cf58555629ff797bb9c5 311 Gene3D G3DSA:2.70.70.10 48 137 1.6E-29 T 22-04-2016 AMK43_RS06915 cedc9bebbc50cf58555629ff797bb9c5 311 Gene3D G3DSA:2.70.70.10 169 237 1.6E-29 T 22-04-2016 AMK43_RS06915 cedc9bebbc50cf58555629ff797bb9c5 311 SUPERFAMILY SSF51261 173 234 5.75E-17 T 22-04-2016 IPR011055 Duplicated hybrid motif AMK43_RS10550 b609a191f3ac4196226cce0786bc90a7 1528 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 1100 1471 1.3E-25 T 22-04-2016 IPR007452 Translocation and assembly module TamB AMK43_RS02835 095c8b637856a67d02948326bff993cb 386 Pfam PF01168 Alanine racemase, N-terminal domain 33 265 2.6E-14 T 22-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 AMK43_RS02835 095c8b637856a67d02948326bff993cb 386 Gene3D G3DSA:3.20.20.10 42 193 5.1E-8 T 22-04-2016 IPR029066 PLP-binding barrel AMK43_RS02835 095c8b637856a67d02948326bff993cb 386 SUPERFAMILY SSF51419 34 267 6.8E-19 T 22-04-2016 IPR029066 PLP-binding barrel AMK43_RS07515 d4370b2996086fccbdbd8497a2fc3436 384 Pfam PF03235 Protein of unknown function DUF262 12 167 2.6E-15 T 22-04-2016 IPR004919 Domain of unknown function DUF262 AMK43_RS07700 08ea8e70eba0b2607a8cfee94147e758 555 PANTHER PTHR24221:SF138 5 309 1.2E-55 T 22-04-2016 AMK43_RS07700 08ea8e70eba0b2607a8cfee94147e758 555 PANTHER PTHR24221:SF138 328 547 1.2E-55 T 22-04-2016 AMK43_RS07700 08ea8e70eba0b2607a8cfee94147e758 555 Gene3D G3DSA:1.20.1560.10 13 310 8.6E-27 T 22-04-2016 AMK43_RS07700 08ea8e70eba0b2607a8cfee94147e758 555 SUPERFAMILY SSF90123 14 313 3.01E-31 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS07700 08ea8e70eba0b2607a8cfee94147e758 555 SUPERFAMILY SSF52540 342 549 3.62E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07700 08ea8e70eba0b2607a8cfee94147e758 555 PANTHER PTHR24221 5 309 1.2E-55 T 22-04-2016 AMK43_RS07700 08ea8e70eba0b2607a8cfee94147e758 555 PANTHER PTHR24221 328 547 1.2E-55 T 22-04-2016 AMK43_RS07700 08ea8e70eba0b2607a8cfee94147e758 555 Pfam PF00005 ABC transporter 365 506 1.0E-23 T 22-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 AMK43_RS07700 08ea8e70eba0b2607a8cfee94147e758 555 Gene3D G3DSA:3.40.50.300 350 549 6.8E-45 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS07700 08ea8e70eba0b2607a8cfee94147e758 555 Pfam PF00664 ABC transporter transmembrane region 17 268 5.6E-16 T 22-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 AMK43_RS07700 08ea8e70eba0b2607a8cfee94147e758 555 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 22-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 AMK43_RS07700 08ea8e70eba0b2607a8cfee94147e758 555 SMART SM00382 373 553 2.6E-6 T 22-04-2016 IPR003593 AAA+ ATPase domain AMK43_RS06220 522124a150e3537d710aa34fdf6b5afc 259 PANTHER PTHR23416 3 251 3.9E-125 T 22-04-2016 AMK43_RS06220 522124a150e3537d710aa34fdf6b5afc 259 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 50 4.4E-7 T 22-04-2016 IPR001451 Hexapeptide repeat AMK43_RS06220 522124a150e3537d710aa34fdf6b5afc 259 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 106 137 4.2E-11 T 22-04-2016 IPR001451 Hexapeptide repeat AMK43_RS06220 522124a150e3537d710aa34fdf6b5afc 259 PANTHER PTHR23416:SF8 3 251 3.9E-125 T 22-04-2016 AMK43_RS06220 522124a150e3537d710aa34fdf6b5afc 259 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 177 257 2.7E-27 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK43_RS06220 522124a150e3537d710aa34fdf6b5afc 259 Gene3D G3DSA:2.160.10.10 5 191 9.5E-51 T 22-04-2016 AMK43_RS06220 522124a150e3537d710aa34fdf6b5afc 259 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 6 257 9.4E-109 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK43_RS06220 522124a150e3537d710aa34fdf6b5afc 259 Gene3D G3DSA:1.20.1180.10 194 259 8.9E-24 T 22-04-2016 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK43_RS06220 522124a150e3537d710aa34fdf6b5afc 259 PIRSF PIRSF000456 2 259 8.6E-109 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK43_RS06220 522124a150e3537d710aa34fdf6b5afc 259 SUPERFAMILY SSF51161 5 259 1.27E-80 T 22-04-2016 IPR011004 Trimeric LpxA-like AMK43_RS06220 522124a150e3537d710aa34fdf6b5afc 259 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 3 259 45.618 T 22-04-2016 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12|UniPathway: UPA00359 AMK43_RS06485 75a1d6f923772f0931d29a597bb076dd 3653 SUPERFAMILY SSF103515 3338 3651 4.18E-18 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS06485 75a1d6f923772f0931d29a597bb076dd 3653 SMART SM00869 3372 3647 2.1E-7 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS10485 93b8a333cf077a44b560bb7b9a1b4f4c 569 Gene3D G3DSA:3.40.50.720 130 276 2.1E-14 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS10485 93b8a333cf077a44b560bb7b9a1b4f4c 569 Gene3D G3DSA:1.10.287.70 37 122 1.0E-4 T 22-04-2016 AMK43_RS10485 93b8a333cf077a44b560bb7b9a1b4f4c 569 PANTHER PTHR31563 38 355 3.2E-34 T 22-04-2016 AMK43_RS10485 93b8a333cf077a44b560bb7b9a1b4f4c 569 PANTHER PTHR31563 377 557 3.2E-34 T 22-04-2016 AMK43_RS10485 93b8a333cf077a44b560bb7b9a1b4f4c 569 Pfam PF06241 Castor and Pollux, part of voltage-gated ion channel 297 365 2.8E-11 T 22-04-2016 IPR010420 CASTOR/POLLUX/SYM8 ion channels AMK43_RS03790 9a36f53f523cf71c0dd7f688ebac3401 334 Gene3D G3DSA:3.90.1640.10 27 216 1.5E-28 T 22-04-2016 AMK43_RS03790 9a36f53f523cf71c0dd7f688ebac3401 334 Pfam PF02272 DHHA1 domain 282 328 6.8E-7 T 22-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 AMK43_RS03790 9a36f53f523cf71c0dd7f688ebac3401 334 SUPERFAMILY SSF64182 27 329 3.01E-57 T 22-04-2016 AMK43_RS03790 9a36f53f523cf71c0dd7f688ebac3401 334 Pfam PF01368 DHH family 27 178 7.2E-14 T 22-04-2016 IPR001667 DDH domain AMK43_RS05895 580ac253cd4b061a7bb276a827df77ac 205 SUPERFAMILY SSF48371 24 201 3.52E-33 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMK43_RS05895 580ac253cd4b061a7bb276a827df77ac 205 Gene3D G3DSA:1.25.10.10 69 177 1.8E-10 T 22-04-2016 IPR011989 Armadillo-like helical AMK43_RS05895 580ac253cd4b061a7bb276a827df77ac 205 Pfam PF08713 DNA alkylation repair enzyme 31 179 2.0E-11 T 22-04-2016 IPR014825 DNA alkylation repair enzyme AMK43_RS01530 206b4667d7d95d5f85751b5675a69897 170 PANTHER PTHR21600 24 143 4.1E-12 T 22-04-2016 AMK43_RS01530 206b4667d7d95d5f85751b5675a69897 170 PANTHER PTHR21600:SF3 24 143 4.1E-12 T 22-04-2016 AMK43_RS01530 206b4667d7d95d5f85751b5675a69897 170 Pfam PF04468 PSP1 C-terminal conserved region 65 149 9.1E-20 T 22-04-2016 IPR007557 PSP1, C-terminal AMK43_RS04440 6390c7d82af57a0bfb59f0509242fbc8 321 Gene3D G3DSA:3.40.50.2300 156 287 1.3E-44 T 22-04-2016 AMK43_RS04440 6390c7d82af57a0bfb59f0509242fbc8 321 Pfam PF04392 ABC transporter substrate binding protein 38 320 8.9E-73 T 22-04-2016 IPR007487 ABC transporter, substrate-binding protein AMK43_RS04440 6390c7d82af57a0bfb59f0509242fbc8 321 SUPERFAMILY SSF53822 45 282 5.55E-18 T 22-04-2016 IPR028082 Periplasmic binding protein-like I AMK43_RS04440 6390c7d82af57a0bfb59f0509242fbc8 321 PANTHER PTHR35271 6 321 1.2E-53 T 22-04-2016 AMK43_RS04440 6390c7d82af57a0bfb59f0509242fbc8 321 Gene3D G3DSA:3.40.50.2300 36 155 5.6E-43 T 22-04-2016 AMK43_RS04260 6617eda32b2d1625cbedca01767cff8b 151 PANTHER PTHR30455:SF2 2 150 1.3E-56 T 22-04-2016 AMK43_RS04260 6617eda32b2d1625cbedca01767cff8b 151 Pfam PF03477 ATP cone domain 50 134 3.0E-15 T 22-04-2016 IPR005144 ATP-cone domain AMK43_RS04260 6617eda32b2d1625cbedca01767cff8b 151 PANTHER PTHR30455 2 150 1.3E-56 T 22-04-2016 AMK43_RS04260 6617eda32b2d1625cbedca01767cff8b 151 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 151 72.717 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMK43_RS04260 6617eda32b2d1625cbedca01767cff8b 151 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 146 1.8E-53 T 22-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 AMK43_RS03330 1f9547943bc94cde6d48e2147200a26a 312 Pfam PF06166 Protein of unknown function (DUF979) 12 309 1.3E-111 T 22-04-2016 IPR009323 Protein of unknown function DUF979 AMK43_RS04840 030bd266b92e2e99d811948059ddb6c2 485 Pfam PF01943 Polysaccharide biosynthesis protein 6 282 9.5E-27 T 22-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 AMK43_RS04840 030bd266b92e2e99d811948059ddb6c2 485 PANTHER PTHR30250 1 484 2.3E-28 T 22-04-2016 AMK43_RS03130 e7a1b6aa32626b575f7c28eb03bc798c 187 Gene3D G3DSA:1.25.10.10 129 178 1.3E-4 T 22-04-2016 IPR011989 Armadillo-like helical AMK43_RS03130 e7a1b6aa32626b575f7c28eb03bc798c 187 SUPERFAMILY SSF48371 57 176 8.23E-6 T 22-04-2016 IPR016024 Armadillo-type fold GO:0005488 AMK43_RS03075 f075d6438d9ce5a9cb3891edd97a4c0d 689 Gene3D G3DSA:3.40.1090.10 2 186 1.4E-9 T 22-04-2016 AMK43_RS03075 f075d6438d9ce5a9cb3891edd97a4c0d 689 SUPERFAMILY SSF52151 1 67 4.97E-43 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMK43_RS03075 f075d6438d9ce5a9cb3891edd97a4c0d 689 SUPERFAMILY SSF52151 99 278 4.97E-43 T 22-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 AMK43_RS03075 f075d6438d9ce5a9cb3891edd97a4c0d 689 Pfam PF01734 Patatin-like phospholipase 1 187 1.7E-24 T 22-04-2016 IPR002641 Patatin/Phospholipase A2-related GO:0006629 AMK43_RS03075 f075d6438d9ce5a9cb3891edd97a4c0d 689 Pfam PF01103 Surface antigen 430 667 2.9E-12 T 22-04-2016 IPR000184 Bacterial surface antigen (D15) GO:0019867 AMK43_RS03075 f075d6438d9ce5a9cb3891edd97a4c0d 689 PANTHER PTHR14226:SF37 1 421 2.2E-62 T 22-04-2016 AMK43_RS03075 f075d6438d9ce5a9cb3891edd97a4c0d 689 PANTHER PTHR14226 1 421 2.2E-62 T 22-04-2016 AMK43_RS06435 218b7ae8dfaaed592015579074937bc2 308 PANTHER PTHR32196 7 305 3.6E-66 T 22-04-2016 AMK43_RS06435 218b7ae8dfaaed592015579074937bc2 308 PANTHER PTHR32196:SF40 7 305 3.6E-66 T 22-04-2016 AMK43_RS06435 218b7ae8dfaaed592015579074937bc2 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 289 5.0E-38 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK43_RS05205 ab303bdba2781970ba1049e776aea737 159 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 132 155 4.53E-5 T 22-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 AMK43_RS05205 ab303bdba2781970ba1049e776aea737 159 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 31 55 4.53E-5 T 22-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 AMK43_RS05205 ab303bdba2781970ba1049e776aea737 159 PRINTS PR00122 Vacuolar ATP synthase 16kDa subunit signature 57 81 4.53E-5 T 22-04-2016 IPR000245 V-ATPase proteolipid subunit GO:0015078|GO:0015991|GO:0033179 AMK43_RS05205 ab303bdba2781970ba1049e776aea737 159 PANTHER PTHR10263 1 94 4.3E-13 T 22-04-2016 AMK43_RS05205 ab303bdba2781970ba1049e776aea737 159 SUPERFAMILY SSF81333 86 154 6.54E-11 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMK43_RS05205 ab303bdba2781970ba1049e776aea737 159 SUPERFAMILY SSF81333 15 80 4.71E-12 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMK43_RS05205 ab303bdba2781970ba1049e776aea737 159 Gene3D G3DSA:1.20.120.610 7 154 1.2E-33 T 22-04-2016 AMK43_RS05205 ab303bdba2781970ba1049e776aea737 159 Pfam PF00137 ATP synthase subunit C 95 153 1.5E-12 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMK43_RS05205 ab303bdba2781970ba1049e776aea737 159 Pfam PF00137 ATP synthase subunit C 18 76 1.1E-15 T 22-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 AMK43_RS00950 a31f8844d651aa00b63d25bc15c7e4c6 293 Pfam PF02517 CAAX protease self-immunity 134 239 1.2E-8 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 AMK43_RS06175 ac5ead88e87e6fa99d69f70d78bd36c1 354 PIRSF PIRSF006004 3 354 3.4E-123 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS06175 ac5ead88e87e6fa99d69f70d78bd36c1 354 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 348 63.209 T 22-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS06175 ac5ead88e87e6fa99d69f70d78bd36c1 354 PANTHER PTHR30544 1 354 1.6E-147 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS06175 ac5ead88e87e6fa99d69f70d78bd36c1 354 Pfam PF04055 Radical SAM superfamily 110 275 3.6E-13 T 22-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 AMK43_RS06175 ac5ead88e87e6fa99d69f70d78bd36c1 354 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 351 1.5E-114 T 22-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 AMK43_RS06175 ac5ead88e87e6fa99d69f70d78bd36c1 354 SUPERFAMILY SSF102114 104 319 1.44E-9 T 22-04-2016 AMK43_RS06175 ac5ead88e87e6fa99d69f70d78bd36c1 354 PANTHER PTHR30544:SF5 1 354 1.6E-147 T 22-04-2016 AMK43_RS07260 b046765fe98f63ffd4a663f9af21084a 279 Pfam PF08239 Bacterial SH3 domain 212 274 3.0E-7 T 22-04-2016 IPR003646 SH3-like domain, bacterial-type AMK43_RS11050 0bd535d465580302fa376321d5238558 103 PANTHER PTHR35810 1 103 2.1E-33 T 22-04-2016 AMK43_RS11050 0bd535d465580302fa376321d5238558 103 Pfam PF13310 Virulence protein RhuM family 59 103 2.5E-15 T 22-04-2016 IPR011204 Virulence protein RhuM-like AMK43_RS11050 0bd535d465580302fa376321d5238558 103 PANTHER PTHR35810:SF2 1 103 2.1E-33 T 22-04-2016 AMK43_RS05310 eb33c646813631cdba6473a947b4e334 314 Pfam PF13280 WYL domain 149 310 1.5E-15 T 22-04-2016 IPR026881 WYL domain AMK43_RS10810 2c3b0093aeb7baaf68c7eb30a4ffb477 88 Gene3D G3DSA:3.10.180.10 15 69 2.8E-7 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK43_RS10810 2c3b0093aeb7baaf68c7eb30a4ffb477 88 SUPERFAMILY SSF54593 10 70 6.05E-7 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK43_RS10810 2c3b0093aeb7baaf68c7eb30a4ffb477 88 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 59 2.9E-4 T 22-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain AMK43_RS07040 170615b67e2e20ec724f4cdf5041c87c 112 PANTHER PTHR39178 2 112 2.1E-25 T 22-04-2016 AMK43_RS07040 170615b67e2e20ec724f4cdf5041c87c 112 Gene3D G3DSA:3.30.70.1490 6 110 3.6E-19 T 22-04-2016 AMK43_RS07040 170615b67e2e20ec724f4cdf5041c87c 112 SUPERFAMILY SSF118010 1 111 9.03E-31 T 22-04-2016 AMK43_RS07040 170615b67e2e20ec724f4cdf5041c87c 112 Pfam PF04327 Cysteine peptidase C108, N-terminal of ribosomal L27 1 105 4.2E-26 T 22-04-2016 IPR007422 Cysteine peptidase C108, N-terminal of ribosomal L27 AMK43_RS02505 63a3061a64e0e826119ce1652756a079 72 Pfam PF17032 zinc-ribbon family 21 69 1.9E-11 T 22-04-2016 IPR031493 Zinc-ribbon 15 AMK43_RS07440 d79865ea47dd4109603b8a8b87695862 2278 Gene3D G3DSA:2.40.128.130 1960 2275 1.8E-26 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS07440 d79865ea47dd4109603b8a8b87695862 2278 Pfam PF03797 Autotransporter beta-domain 1996 2264 7.4E-33 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS07440 d79865ea47dd4109603b8a8b87695862 2278 SUPERFAMILY SSF103515 1962 2275 1.44E-21 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS07440 d79865ea47dd4109603b8a8b87695862 2278 SMART SM00869 1995 2270 2.3E-10 T 22-04-2016 IPR005546 Autotransporter beta-domain AMK43_RS01475 1ac067d41e71ef6007a4052ce2756a2e 189 Pfam PF00156 Phosphoribosyl transferase domain 36 156 7.1E-10 T 22-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 AMK43_RS01475 1ac067d41e71ef6007a4052ce2756a2e 189 PANTHER PTHR11776:SF1 1 188 1.8E-71 T 22-04-2016 AMK43_RS01475 1ac067d41e71ef6007a4052ce2756a2e 189 SUPERFAMILY SSF53271 1 184 3.07E-44 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS01475 1ac067d41e71ef6007a4052ce2756a2e 189 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 39.818 T 22-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 AMK43_RS01475 1ac067d41e71ef6007a4052ce2756a2e 189 PANTHER PTHR11776 1 188 1.8E-71 T 22-04-2016 AMK43_RS01475 1ac067d41e71ef6007a4052ce2756a2e 189 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 186 1.1E-71 T 22-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 AMK43_RS01475 1ac067d41e71ef6007a4052ce2756a2e 189 Gene3D G3DSA:3.40.50.2020 1 186 2.2E-60 T 22-04-2016 IPR029057 Phosphoribosyltransferase-like AMK43_RS01235 18ee859f545668281ccbe231c6482883 257 PANTHER PTHR10804:SF41 1 254 4.4E-107 T 22-04-2016 AMK43_RS01235 18ee859f545668281ccbe231c6482883 257 Gene3D G3DSA:3.90.230.10 4 254 2.2E-80 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK43_RS01235 18ee859f545668281ccbe231c6482883 257 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 254 6.6E-90 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMK43_RS01235 18ee859f545668281ccbe231c6482883 257 SUPERFAMILY SSF55920 1 254 3.53E-78 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK43_RS01235 18ee859f545668281ccbe231c6482883 257 PRINTS PR00599 Methionine aminopeptidase-1 signature 167 179 7.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK43_RS01235 18ee859f545668281ccbe231c6482883 257 PRINTS PR00599 Methionine aminopeptidase-1 signature 198 210 7.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK43_RS01235 18ee859f545668281ccbe231c6482883 257 PRINTS PR00599 Methionine aminopeptidase-1 signature 74 87 7.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK43_RS01235 18ee859f545668281ccbe231c6482883 257 PRINTS PR00599 Methionine aminopeptidase-1 signature 97 113 7.0E-21 T 22-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase AMK43_RS01235 18ee859f545668281ccbe231c6482883 257 PANTHER PTHR10804 1 254 4.4E-107 T 22-04-2016 AMK43_RS01235 18ee859f545668281ccbe231c6482883 257 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 173 191 - T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMK43_RS01235 18ee859f545668281ccbe231c6482883 257 Pfam PF00557 Metallopeptidase family M24 12 245 2.6E-49 T 22-04-2016 IPR000994 Peptidase M24, structural domain AMK43_RS01235 18ee859f545668281ccbe231c6482883 257 Hamap MF_01974 Methionine aminopeptidase [map]. 2 256 37.237 T 22-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 AMK43_RS03600 3e7aaa7409b1702a90b8ebc1fb30edbc 298 SUPERFAMILY SSF51366 52 203 5.18E-8 T 22-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 AMK43_RS03600 3e7aaa7409b1702a90b8ebc1fb30edbc 298 Gene3D G3DSA:3.20.20.70 48 223 2.4E-7 T 22-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 AMK43_RS02785 a8c3a4b8d1c327b640e31c5c7199bf11 134 Pfam PF08349 Protein of unknown function (DUF1722) 18 125 7.2E-22 T 22-04-2016 IPR013560 Domain of unknown function DUF1722 AMK43_RS08780 5c1824a482fd38d2e5cccda4cdb9e0ca 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 55 312 1.2E-35 T 22-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 AMK43_RS08780 5c1824a482fd38d2e5cccda4cdb9e0ca 349 PANTHER PTHR30482:SF10 17 346 3.8E-94 T 22-04-2016 AMK43_RS08780 5c1824a482fd38d2e5cccda4cdb9e0ca 349 PANTHER PTHR30482 17 346 3.8E-94 T 22-04-2016 AMK43_RS03540 9d9ac8dae78083b5842e22df357ad0b6 63 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 1 62 4.7E-26 T 22-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 AMK43_RS10420 85536c357c649c20df1c1fc03da63149 67 Pfam PF05339 Protein of unknown function (DUF739) 4 66 7.0E-11 T 22-04-2016 IPR008003 Protein of unknown function DUF739 AMK43_RS10420 85536c357c649c20df1c1fc03da63149 67 Gene3D G3DSA:1.10.260.40 5 63 1.9E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS10420 85536c357c649c20df1c1fc03da63149 67 SUPERFAMILY SSF47413 4 62 2.25E-7 T 22-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 AMK43_RS05935 3b39c0b9874cb750c458f983afe18134 100 SUPERFAMILY SSF51182 30 99 6.36E-12 T 22-04-2016 IPR011051 RmlC-like cupin domain AMK43_RS05935 3b39c0b9874cb750c458f983afe18134 100 Pfam PF07883 Cupin domain 34 98 4.8E-9 T 22-04-2016 IPR013096 Cupin 2, conserved barrel AMK43_RS05935 3b39c0b9874cb750c458f983afe18134 100 Gene3D G3DSA:2.60.120.10 15 100 1.3E-33 T 22-04-2016 IPR014710 RmlC-like jelly roll fold AMK43_RS08400 8a3239feb400a5925e7ff55e90cf570d 682 Pfam PF13175 AAA ATPase domain 1 395 5.7E-55 T 22-04-2016 AMK43_RS08400 8a3239feb400a5925e7ff55e90cf570d 682 SUPERFAMILY SSF52540 1 298 1.04E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08400 8a3239feb400a5925e7ff55e90cf570d 682 SUPERFAMILY SSF52540 327 415 1.04E-11 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08400 8a3239feb400a5925e7ff55e90cf570d 682 Gene3D G3DSA:3.40.50.300 112 280 9.5E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08400 8a3239feb400a5925e7ff55e90cf570d 682 Gene3D G3DSA:3.40.50.300 318 421 9.5E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS08400 8a3239feb400a5925e7ff55e90cf570d 682 Gene3D G3DSA:3.40.50.300 1 70 9.5E-15 T 22-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase AMK43_RS05240 be244710d14178e82dacb301d30033e9 84 Pfam PF13711 Domain of unknown function (DUF4160) 9 72 2.1E-21 T 22-04-2016 IPR025427 Protein of unknown function DUF4160 AMK43_RS08975 21a8cceb473d5d3c8a57d17d526c574d 293 PANTHER PTHR39192 1 291 7.9E-97 T 22-04-2016 AMK43_RS08975 21a8cceb473d5d3c8a57d17d526c574d 293 Pfam PF09375 Imelysin 50 284 5.2E-41 T 22-04-2016 AMK43_RS07560 1f301ede7ef00f1f0fc611da13277dea 178 Pfam PF13302 Acetyltransferase (GNAT) domain 7 146 1.0E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS07560 1f301ede7ef00f1f0fc611da13277dea 178 SUPERFAMILY SSF55729 5 170 8.82E-21 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS07560 1f301ede7ef00f1f0fc611da13277dea 178 Gene3D G3DSA:3.40.630.30 4 176 3.6E-23 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS07560 1f301ede7ef00f1f0fc611da13277dea 178 PANTHER PTHR13256:SF48 3 178 3.7E-55 T 22-04-2016 AMK43_RS07560 1f301ede7ef00f1f0fc611da13277dea 178 PANTHER PTHR13256 3 178 3.7E-55 T 22-04-2016 AMK43_RS10795 75346eb9d022d66fed7ce1c66d3a46f8 112 Pfam PF03413 Peptidase propeptide and YPEB domain 47 107 5.2E-9 T 22-04-2016 IPR025711 PepSY domain AMK43_RS05670 bc1d482acdc131516ca0bef36b484593 251 PANTHER PTHR10953 1 159 3.3E-63 T 22-04-2016 AMK43_RS05670 bc1d482acdc131516ca0bef36b484593 251 PANTHER PTHR10953 199 248 3.3E-63 T 22-04-2016 AMK43_RS05670 bc1d482acdc131516ca0bef36b484593 251 PANTHER PTHR10953:SF145 1 159 3.3E-63 T 22-04-2016 AMK43_RS05670 bc1d482acdc131516ca0bef36b484593 251 PANTHER PTHR10953:SF145 199 248 3.3E-63 T 22-04-2016 AMK43_RS05670 bc1d482acdc131516ca0bef36b484593 251 SUPERFAMILY SSF69572 3 249 1.96E-57 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMK43_RS05670 bc1d482acdc131516ca0bef36b484593 251 Gene3D G3DSA:3.40.50.720 2 248 4.2E-44 T 22-04-2016 IPR016040 NAD(P)-binding domain AMK43_RS05670 bc1d482acdc131516ca0bef36b484593 251 Pfam PF00899 ThiF family 10 160 8.8E-35 T 22-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 AMK43_RS09520 9ff01fdaf79e813b16867fce75711033 99 Pfam PF11823 Protein of unknown function (DUF3343) 7 74 1.1E-13 T 22-04-2016 IPR021778 Protein of unknown function DUF3343 AMK43_RS06335 1768b0628728a2f475b20a10ced2e733 572 Pfam PF03235 Protein of unknown function DUF262 12 260 4.1E-32 T 22-04-2016 IPR004919 Domain of unknown function DUF262 AMK43_RS06335 1768b0628728a2f475b20a10ced2e733 572 PANTHER PTHR37292 96 568 1.2E-69 T 22-04-2016 AMK43_RS06335 1768b0628728a2f475b20a10ced2e733 572 PANTHER PTHR37292 1 78 1.2E-69 T 22-04-2016 AMK43_RS06335 1768b0628728a2f475b20a10ced2e733 572 PANTHER PTHR37292:SF1 96 568 1.2E-69 T 22-04-2016 AMK43_RS06335 1768b0628728a2f475b20a10ced2e733 572 PANTHER PTHR37292:SF1 1 78 1.2E-69 T 22-04-2016 AMK43_RS08625 36ea3cc0a877a2d9e7437e9c7f5bda27 268 PANTHER PTHR11106 87 267 3.3E-65 T 22-04-2016 AMK43_RS08625 36ea3cc0a877a2d9e7437e9c7f5bda27 268 Gene3D G3DSA:3.40.220.10 86 267 2.7E-58 T 22-04-2016 AMK43_RS08625 36ea3cc0a877a2d9e7437e9c7f5bda27 268 Pfam PF01661 Macro domain 103 232 8.0E-30 T 22-04-2016 IPR002589 Macro domain AMK43_RS08625 36ea3cc0a877a2d9e7437e9c7f5bda27 268 SMART SM00506 86 232 2.4E-24 T 22-04-2016 IPR002589 Macro domain AMK43_RS08625 36ea3cc0a877a2d9e7437e9c7f5bda27 268 SUPERFAMILY SSF52949 82 267 2.52E-52 T 22-04-2016 AMK43_RS00590 c9eb36a6fa3e66d533b21ed7e22a3dd8 247 Pfam PF14062 Domain of unknown function (DUF4253) 141 247 5.1E-28 T 22-04-2016 IPR025349 Domain of unknown function DUF4253 AMK43_RS09915 33dc0d457ba64a362ad45b8ba16695ed 108 Pfam PF03413 Peptidase propeptide and YPEB domain 43 103 9.3E-14 T 22-04-2016 IPR025711 PepSY domain AMK43_RS02350 07cd08d60db9b322e2575cb569adce55 67 Pfam PF03840 Preprotein translocase SecG subunit 5 65 2.5E-9 T 22-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 AMK43_RS10195 950362f217ce63900fc692339d734e55 219 Gene3D G3DSA:3.90.1140.10 31 177 3.8E-7 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AMK43_RS10195 950362f217ce63900fc692339d734e55 219 SUPERFAMILY SSF55144 20 128 1.23E-8 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AMK43_RS10195 950362f217ce63900fc692339d734e55 219 SUPERFAMILY SSF55144 157 172 1.23E-8 T 22-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase AMK43_RS10195 950362f217ce63900fc692339d734e55 219 Pfam PF13563 2'-5' RNA ligase superfamily 59 185 2.1E-8 T 22-04-2016 AMK43_RS04040 910906f92a823b65dfedc40433b5fbee 506 Pfam PF13644 DKNYY family 197 345 4.0E-5 T 22-04-2016 IPR027375 DKNYY family AMK43_RS04040 910906f92a823b65dfedc40433b5fbee 506 Pfam PF13644 DKNYY family 68 240 3.5E-16 T 22-04-2016 IPR027375 DKNYY family AMK43_RS02970 3db87bb762dade473303e48461b7aac2 176 Pfam PF00583 Acetyltransferase (GNAT) family 56 146 2.6E-9 T 22-04-2016 IPR000182 GNAT domain GO:0008080 AMK43_RS02970 3db87bb762dade473303e48461b7aac2 176 Gene3D G3DSA:3.40.630.30 1 174 6.1E-49 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS02970 3db87bb762dade473303e48461b7aac2 176 SUPERFAMILY SSF55729 1 156 8.62E-22 T 22-04-2016 IPR016181 Acyl-CoA N-acyltransferase AMK43_RS00820 76ac14180f1803dbe160ff75cc2d873f 230 PANTHER PTHR34857:SF1 1 230 8.3E-28 T 22-04-2016 AMK43_RS00820 76ac14180f1803dbe160ff75cc2d873f 230 Pfam PF02361 Cobalt transport protein 15 182 3.9E-16 T 22-04-2016 IPR003339 ABC/ECF transporter, transmembrane component AMK43_RS00820 76ac14180f1803dbe160ff75cc2d873f 230 PANTHER PTHR34857 1 230 8.3E-28 T 22-04-2016 AMK43_RS01815 dfd36b8c06ada573d1a2756789409f66 348 SUPERFAMILY SSF50156 94 197 1.16E-10 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS01815 dfd36b8c06ada573d1a2756789409f66 348 PANTHER PTHR22939 68 76 3.4E-41 T 22-04-2016 AMK43_RS01815 dfd36b8c06ada573d1a2756789409f66 348 PANTHER PTHR22939 121 348 3.4E-41 T 22-04-2016 AMK43_RS01815 dfd36b8c06ada573d1a2756789409f66 348 Pfam PF13180 PDZ domain 131 198 5.0E-7 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS01815 dfd36b8c06ada573d1a2756789409f66 348 PANTHER PTHR22939:SF78 68 76 3.4E-41 T 22-04-2016 AMK43_RS01815 dfd36b8c06ada573d1a2756789409f66 348 PANTHER PTHR22939:SF78 121 348 3.4E-41 T 22-04-2016 AMK43_RS01815 dfd36b8c06ada573d1a2756789409f66 348 Pfam PF02163 Peptidase family M50 6 335 6.9E-64 T 22-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 AMK43_RS01815 dfd36b8c06ada573d1a2756789409f66 348 Gene3D G3DSA:2.30.42.10 91 198 1.8E-11 T 22-04-2016 IPR001478 PDZ domain GO:0005515 AMK43_RS02045 7fc06aa493f1be6e73ea1e749f2b3908 321 SUPERFAMILY SSF69304 57 239 1.03E-12 T 22-04-2016 AMK43_RS02045 7fc06aa493f1be6e73ea1e749f2b3908 321 Gene3D G3DSA:2.120.10.30 97 225 6.0E-9 T 22-04-2016 IPR011042 Six-bladed beta-propeller, TolB-like AMK43_RS00670 cfa4f973413de8c67a847ea55f87bda9 252 SUPERFAMILY SSF161098 53 236 1.14E-19 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00670 cfa4f973413de8c67a847ea55f87bda9 252 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 232 4.6E-12 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00670 cfa4f973413de8c67a847ea55f87bda9 252 PANTHER PTHR30151:SF8 13 252 1.3E-34 T 22-04-2016 AMK43_RS00670 cfa4f973413de8c67a847ea55f87bda9 252 Gene3D G3DSA:1.10.3720.10 51 233 6.4E-15 T 22-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 AMK43_RS00670 cfa4f973413de8c67a847ea55f87bda9 252 PANTHER PTHR30151 13 252 1.3E-34 T 22-04-2016 AMK43_RS06835 36e033d613fa2b7447b28ff9c2d7f186 250 PANTHER PTHR34300:SF2 21 250 1.8E-59 T 22-04-2016 AMK43_RS06835 36e033d613fa2b7447b28ff9c2d7f186 250 PANTHER PTHR34300 21 250 1.8E-59 T 22-04-2016 AMK43_RS06835 36e033d613fa2b7447b28ff9c2d7f186 250 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 37 239 1.1E-50 T 22-04-2016 IPR003744 Protein of unknown function DUF165 AMK43_RS06835 36e033d613fa2b7447b28ff9c2d7f186 250 Pfam PF02592 Putative vitamin uptake transporter 67 233 1.6E-40 T 22-04-2016 IPR003744 Protein of unknown function DUF165 AMK43_RS08445 e4a26f9268a8269ac5d45d32efbe39c1 244 Gene3D G3DSA:3.30.930.10 3 177 8.3E-31 T 22-04-2016 AMK43_RS08445 e4a26f9268a8269ac5d45d32efbe39c1 244 SUPERFAMILY SSF55681 3 177 8.29E-29 T 22-04-2016 AMK43_RS08445 e4a26f9268a8269ac5d45d32efbe39c1 244 PANTHER PTHR12835 1 231 7.1E-20 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 AMK43_RS08445 e4a26f9268a8269ac5d45d32efbe39c1 244 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 4 226 5.7E-29 T 22-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 AMK43_RS08445 e4a26f9268a8269ac5d45d32efbe39c1 244 Pfam PF03099 Biotin/lipoate A/B protein ligase family 11 134 8.2E-15 T 22-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 AMK43_RS08870 5522f8da7ec4dc88150d6867d7c46804 643 Pfam PF09972 Predicted membrane protein (DUF2207) 32 555 1.7E-66 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane AMK43_RS02125 4da3ad2946b6e57620d24e806b21cc3e 153 Pfam PF11694 Protein of unknown function (DUF3290) 2 127 4.3E-20 T 22-04-2016 IPR021707 Protein of unknown function DUF3290 AMK43_RS06280 90ace6634f861a8bf3354d3cabd9edc5 316 Pfam PF07751 Abi-like protein 34 236 8.3E-37 T 22-04-2016 IPR011664 Abortive infection system protein AbiD/AbiF-like AMK43_RS06075 2d0da8c73622a6cebd78003c9a9d5ca5 474 Pfam PF13091 PLD-like domain 301 438 5.6E-21 T 22-04-2016 IPR025202 Phospholipase D-like domain AMK43_RS06075 2d0da8c73622a6cebd78003c9a9d5ca5 474 Gene3D G3DSA:3.30.870.10 57 152 3.2E-5 T 22-04-2016 AMK43_RS06075 2d0da8c73622a6cebd78003c9a9d5ca5 474 Gene3D G3DSA:3.30.870.10 204 241 3.2E-5 T 22-04-2016 AMK43_RS06075 2d0da8c73622a6cebd78003c9a9d5ca5 474 Gene3D G3DSA:3.30.870.10 297 442 1.3E-15 T 22-04-2016 AMK43_RS06075 2d0da8c73622a6cebd78003c9a9d5ca5 474 SUPERFAMILY SSF56024 298 445 2.47E-14 T 22-04-2016 AMK43_RS03675 a74c168a2bb1e7eecbf4bf28d4952fbd 133 Gene3D G3DSA:3.10.180.10 2 120 5.0E-24 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK43_RS03675 a74c168a2bb1e7eecbf4bf28d4952fbd 133 SUPERFAMILY SSF54593 4 120 3.32E-18 T 22-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase AMK43_RS03675 a74c168a2bb1e7eecbf4bf28d4952fbd 133 Pfam PF12681 Glyoxalase-like domain 6 120 1.5E-12 T 22-04-2016 IPR025870 Glyoxalase-like domain AMK43_RS00870 915a2ad17c85497c762821970da25450 137 SUPERFAMILY SSF50475 6 124 8.79E-16 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK43_RS00870 915a2ad17c85497c762821970da25450 137 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 5 81 2.2E-5 T 22-04-2016 IPR011576 Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain GO:0004733|GO:0010181|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|UniPathway: UPA00647 AMK43_RS00870 915a2ad17c85497c762821970da25450 137 Gene3D G3DSA:2.30.110.10 3 126 2.3E-34 T 22-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 AMK43_RS10310 8c1b627e6922097839553815a99d321b 191 Pfam PF02517 CAAX protease self-immunity 51 132 5.3E-16 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 AMK43_RS01695 5b2ef150b18efd7e9a7640ccb4b5bd9f 266 Pfam PF16138 Domain of unknown function (4846) 28 264 2.3E-102 T 22-04-2016 IPR032315 Protein of unknown function DUF4846 AMK43_RS09580 7b8cdf8c665fb54137bd97c8c07b7d23 270 Pfam PF05857 TraX protein 13 251 1.2E-45 T 22-04-2016 IPR008875 TraX AMK43_RS06475 0966014bfa605f7d9fc2ca69b140d34f 424 SUPERFAMILY SSF56954 13 416 5.1E-23 T 22-04-2016 AMK43_RS06475 0966014bfa605f7d9fc2ca69b140d34f 424 Gene3D G3DSA:1.20.1600.10 28 421 3.6E-11 T 22-04-2016 AMK43_RS06475 0966014bfa605f7d9fc2ca69b140d34f 424 Pfam PF02321 Outer membrane efflux protein 31 233 1.2E-8 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMK43_RS06475 0966014bfa605f7d9fc2ca69b140d34f 424 Pfam PF02321 Outer membrane efflux protein 278 417 1.3E-11 T 22-04-2016 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 AMK43_RS04580 2c622cdb7e3f2a96f2ea6da76b5bfcc9 188 PANTHER PTHR12213 1 188 7.6E-68 T 22-04-2016 AMK43_RS04580 2c622cdb7e3f2a96f2ea6da76b5bfcc9 188 SUPERFAMILY SSF89028 1 180 2.94E-57 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AMK43_RS04580 2c622cdb7e3f2a96f2ea6da76b5bfcc9 188 Pfam PF01923 Cobalamin adenosyltransferase 3 168 1.2E-53 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AMK43_RS04580 2c622cdb7e3f2a96f2ea6da76b5bfcc9 188 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 182 1.0E-44 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK43_RS04580 2c622cdb7e3f2a96f2ea6da76b5bfcc9 188 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 178 8.2E-55 T 22-04-2016 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|UniPathway: UPA00148 AMK43_RS04580 2c622cdb7e3f2a96f2ea6da76b5bfcc9 188 Gene3D G3DSA:1.20.1200.10 13 184 3.8E-55 T 22-04-2016 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 AMK43_RS06885 a947e98af86e98309f69bd53483a8663 430 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 205 309 2.1E-11 T 22-04-2016 IPR000477 Reverse transcriptase domain AMK43_RS06885 a947e98af86e98309f69bd53483a8663 430 SUPERFAMILY SSF56672 234 293 9.93E-5 T 22-04-2016 AMK43_RS00570 a1a68f4d551e75310bf7524df5b83289 67 Pfam PF14207 DpnD/PcfM-like protein 8 45 1.3E-9 T 22-04-2016 IPR025575 DpnD/PcfM-like protein AMK43_RS08165 6909fdd2e968d70b5f9fbc967543cf42 224 Gene3D G3DSA:1.20.144.10 30 197 1.4E-34 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK43_RS08165 6909fdd2e968d70b5f9fbc967543cf42 224 Pfam PF01569 PAP2 superfamily 74 192 1.1E-22 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK43_RS08165 6909fdd2e968d70b5f9fbc967543cf42 224 SMART SM00014 71 191 5.9E-16 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK43_RS08165 6909fdd2e968d70b5f9fbc967543cf42 224 SUPERFAMILY SSF48317 33 197 2.49E-31 T 22-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase AMK43_RS02235 1be7a7fe04212f9e25e7e3d5abcf1673 346 PANTHER PTHR31528 1 340 3.6E-114 T 22-04-2016 IPR027939 NMT1/THI5 family GO:0009228 UniPathway: UPA00060 AMK43_RS02235 1be7a7fe04212f9e25e7e3d5abcf1673 346 Gene3D G3DSA:3.40.190.10 127 254 1.4E-7 T 22-04-2016 AMK43_RS02235 1be7a7fe04212f9e25e7e3d5abcf1673 346 Pfam PF09084 NMT1/THI5 like 53 269 6.7E-68 T 22-04-2016 IPR015168 SsuA/THI5-like AMK43_RS02235 1be7a7fe04212f9e25e7e3d5abcf1673 346 SUPERFAMILY SSF53850 46 329 5.67E-44 T 22-04-2016 AMK43_RS02235 1be7a7fe04212f9e25e7e3d5abcf1673 346 PANTHER PTHR31528:SF3 1 340 3.6E-114 T 22-04-2016 AMK43_RS03990 6535ff9525329aa53256087dc96c4cc0 103 Pfam PF04060 Putative Fe-S cluster 42 75 6.5E-12 T 22-04-2016 IPR007202 4Fe-4S domain GO:0051536 AMK43_RS04035 6897277fd13b57f18a094805e0c586fe 487 Pfam PF13644 DKNYY family 84 242 5.1E-19 T 22-04-2016 IPR027375 DKNYY family AMK43_RS09460 833de93ed2a562d6b676dea6fb6f09b2 484 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 35 443 5.9E-87 T 22-04-2016 IPR001248 Purine-cytosine permease GO:0005215|GO:0016020|GO:0055085 AMK43_RS09460 833de93ed2a562d6b676dea6fb6f09b2 484 PANTHER PTHR30618 16 484 1.4E-130 T 22-04-2016 AMK43_RS09460 833de93ed2a562d6b676dea6fb6f09b2 484 PANTHER PTHR30618:SF0 16 484 1.4E-130 T 22-04-2016 AMK43_RS03615 c5ee4e36edfc5f16bd48b19bc6f0e5e3 173 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 1 166 1.8E-24 T 22-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 AMK43_RS07370 ed823950a181ca3857c943953fd96dac 432 Gene3D G3DSA:3.40.50.1820 336 422 6.5E-11 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS07370 ed823950a181ca3857c943953fd96dac 432 Gene3D G3DSA:3.40.50.1820 83 263 6.5E-11 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS07370 ed823950a181ca3857c943953fd96dac 432 PANTHER PTHR30035:SF1 71 432 9.9E-54 T 22-04-2016 AMK43_RS07370 ed823950a181ca3857c943953fd96dac 432 SUPERFAMILY SSF53474 89 212 2.81E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS07370 ed823950a181ca3857c943953fd96dac 432 SUPERFAMILY SSF53474 355 422 2.81E-13 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS07370 ed823950a181ca3857c943953fd96dac 432 PANTHER PTHR30035 71 432 9.9E-54 T 22-04-2016 IPR007428 MlaA lipoprotein GO:0016020 AMK43_RS11210 adbd8083ff7301878fab3479296111e0 223 Pfam PF09529 Integral membrane protein (intg_mem_TP0381) 6 213 4.3E-23 T 22-04-2016 IPR011737 Conserved hypothetical protein CHP02206, TP0381 AMK43_RS11210 adbd8083ff7301878fab3479296111e0 223 TIGRFAM TIGR02206 intg_mem_TP0381: conserved hypothetical integral membrane protein TIGR02206 2 219 5.0E-32 T 22-04-2016 IPR011737 Conserved hypothetical protein CHP02206, TP0381 AMK43_RS00340 261c9ba7c17cd638931ec01eb6ed509f 196 Pfam PF06078 Bacterial protein of unknown function (DUF937) 6 133 2.3E-29 T 22-04-2016 IPR009282 Protein of unknown function DUF937 AMK43_RS08665 6343ccc817df303a8f9c741c64e53fd8 154 Pfam PF06736 Protein of unknown function (DUF1211) 2 48 2.2E-7 T 22-04-2016 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 AMK43_RS02675 ebcf9c0bbdd7877963a7b987040b9d67 202 Pfam PF10042 Uncharacterized conserved protein (DUF2278) 2 200 4.5E-33 T 22-04-2016 IPR019268 Protein of unknown function DUF2278 AMK43_RS04565 3c2e60d5e1df3e73b955520d0c485cfd 66 Pfam PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) 6 57 3.0E-7 T 22-04-2016 IPR018652 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon AMK43_RS08875 fe310498bb757112ed7fd11eca34cde8 388 Pfam PF09972 Predicted membrane protein (DUF2207) 10 222 2.6E-11 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane AMK43_RS08875 fe310498bb757112ed7fd11eca34cde8 388 Pfam PF09972 Predicted membrane protein (DUF2207) 232 339 1.2E-10 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane AMK43_RS08860 e29aeddc1e8d89b472598756c59fed78 429 Pfam PF09972 Predicted membrane protein (DUF2207) 19 355 2.9E-34 T 22-04-2016 IPR018702 Protein of unknown function DUF2207, membrane AMK43_RS11020 0efa43b70cc018e5b844ac9e74eb0dfe 137 Pfam PF04545 Sigma-70, region 4 82 131 3.7E-7 T 22-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS11020 0efa43b70cc018e5b844ac9e74eb0dfe 137 Gene3D G3DSA:1.10.10.10 77 135 7.3E-7 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS11020 0efa43b70cc018e5b844ac9e74eb0dfe 137 SUPERFAMILY SSF88659 50 135 2.43E-13 T 22-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 AMK43_RS09695 30ae2348e403393d906c6ec6fc295890 207 Pfam PF12952 Domain of unknown function (DUF3841) 12 190 1.9E-56 T 22-04-2016 IPR024211 Protein of unknown function DUF3841 AMK43_RS09140 7e7a0c7243bfe09c477540ebb6d07078 589 SUPERFAMILY SSF110849 53 141 2.09E-7 T 22-04-2016 IPR003115 ParB/Sulfiredoxin AMK43_RS09140 7e7a0c7243bfe09c477540ebb6d07078 589 Pfam PF13224 Domain of unknown function (DUF4032) 182 258 8.0E-5 T 22-04-2016 IPR025111 Domain of unknown function DUF4032 AMK43_RS09140 7e7a0c7243bfe09c477540ebb6d07078 589 Gene3D G3DSA:3.90.1530.10 57 142 1.1E-5 T 22-04-2016 AMK43_RS05580 6e3f5f2817d85b92ba25042868ae36cf 87 Pfam PF02325 YGGT family 12 78 5.1E-16 T 22-04-2016 IPR003425 CCB3/YggT GO:0016020 AMK43_RS08210 b1330337c6ef033fa9b02509245d1d77 452 PANTHER PTHR11119:SF9 13 441 4.4E-111 T 22-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 AMK43_RS08210 b1330337c6ef033fa9b02509245d1d77 452 Pfam PF00860 Permease family 32 412 1.5E-33 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMK43_RS08210 b1330337c6ef033fa9b02509245d1d77 452 PANTHER PTHR11119 13 441 4.4E-111 T 22-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 AMK43_RS01535 5831c6f2527ca9ac6af6077cc80e9775 296 Pfam PF04468 PSP1 C-terminal conserved region 73 158 4.3E-28 T 22-04-2016 IPR007557 PSP1, C-terminal AMK43_RS01535 5831c6f2527ca9ac6af6077cc80e9775 296 PANTHER PTHR21600 27 271 1.2E-49 T 22-04-2016 AMK43_RS01535 5831c6f2527ca9ac6af6077cc80e9775 296 PANTHER PTHR21600:SF3 27 271 1.2E-49 T 22-04-2016 AMK43_RS06840 c5ac29e4b10f03cb0e11ce57325e4357 102 Pfam PF05987 Bacterial protein of unknown function (DUF898) 54 99 2.0E-7 T 22-04-2016 IPR010295 Protein of unknown function DUF898 AMK43_RS05635 82f04ba90b1ffefc39996fee5bb373f3 77 Pfam PF11823 Protein of unknown function (DUF3343) 8 69 5.4E-19 T 22-04-2016 IPR021778 Protein of unknown function DUF3343 AMK43_RS03530 acd6437f77a26025e0b2b58f49340f78 442 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 3 440 1.2E-177 T 22-04-2016 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 AMK43_RS04515 80fcab8778999e55ab3e0abdf8467654 394 Gene3D G3DSA:2.40.50.100 160 193 5.1E-9 T 22-04-2016 AMK43_RS04515 80fcab8778999e55ab3e0abdf8467654 394 Gene3D G3DSA:2.40.50.100 72 94 5.1E-9 T 22-04-2016 AMK43_RS04515 80fcab8778999e55ab3e0abdf8467654 394 PANTHER PTHR30469 1 361 9.3E-13 T 22-04-2016 AMK43_RS04515 80fcab8778999e55ab3e0abdf8467654 394 SUPERFAMILY SSF111369 51 219 4.58E-6 T 22-04-2016 AMK43_RS01765 482c36ca1039d2366461d4055564a37f 228 SUPERFAMILY SSF53474 47 227 2.91E-25 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS01765 482c36ca1039d2366461d4055564a37f 228 Gene3D G3DSA:3.40.50.1820 61 223 1.3E-16 T 22-04-2016 IPR029058 Alpha/Beta hydrolase fold AMK43_RS05135 59336ea7df638fe85fa0d7814d14a269 271 Gene3D G3DSA:2.40.128.20 83 200 7.6E-4 T 22-04-2016 IPR012674 Calycin AMK43_RS06490 8ed86d615567dd6ff42556e73a98fff6 62 Pfam PF04024 PspC domain 3 60 8.2E-17 T 22-04-2016 IPR007168 Phage shock protein, PspC, N-terminal AMK43_RS06490 8ed86d615567dd6ff42556e73a98fff6 62 PANTHER PTHR33885 1 60 9.4E-12 T 22-04-2016 AMK43_RS03500 6e2c13e247f1a36fbef90f70fc66bb56 80 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 1 76 5.8E-29 T 22-04-2016 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 AMK43_RS04420 ccf4fb5a9b41ebea826acb1526751ad9 214 Pfam PF08797 HIRAN domain 127 193 8.3E-8 T 22-04-2016 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 AMK43_RS00715 c0d345556260505040198a793b546f72 214 Pfam PF13644 DKNYY family 62 206 5.6E-21 T 22-04-2016 IPR027375 DKNYY family AMK43_RS00715 c0d345556260505040198a793b546f72 214 Pfam PF13644 DKNYY family 37 102 3.0E-12 T 22-04-2016 IPR027375 DKNYY family AMK43_RS07595 bb6ff9e4e5ad3fe087ba3b2b05c5998c 62 Pfam PF14056 Domain of unknown function (DUF4250) 8 59 8.2E-21 T 22-04-2016 IPR025346 Protein of unknown function DUF4250 AMK43_RS03965 114928c28a60451b5210f43c2a7f7b24 351 Pfam PF03116 NQR2, RnfD, RnfE family 8 319 3.7E-83 T 22-04-2016 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 AMK43_RS03965 114928c28a60451b5210f43c2a7f7b24 351 PANTHER PTHR30578 20 332 1.2E-63 T 22-04-2016 AMK43_RS05665 64c83d7bc0b0aa58ab2a9c1f7ea5ba48 85 Pfam PF03083 Sugar efflux transporter for intercellular exchange 8 81 1.5E-8 T 22-04-2016 IPR004316 SWEET sugar transporter GO:0016021 AMK43_RS11105 41070b36cd3f7c63a91312acaaf412e7 639 SUPERFAMILY SSF56112 297 525 3.06E-7 T 22-04-2016 IPR011009 Protein kinase-like domain AMK43_RS11105 41070b36cd3f7c63a91312acaaf412e7 639 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 3 201 7.1E-19 T 22-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD AMK43_RS06530 92df6d735d4533ceac726ed68d54b27c 456 Pfam PF13644 DKNYY family 272 409 8.4E-21 T 22-04-2016 IPR027375 DKNYY family AMK43_RS06530 92df6d735d4533ceac726ed68d54b27c 456 Pfam PF13644 DKNYY family 70 210 4.1E-20 T 22-04-2016 IPR027375 DKNYY family AMK43_RS06530 92df6d735d4533ceac726ed68d54b27c 456 Pfam PF13644 DKNYY family 22 110 1.8E-8 T 22-04-2016 IPR027375 DKNYY family AMK43_RS06530 92df6d735d4533ceac726ed68d54b27c 456 Pfam PF13644 DKNYY family 139 283 1.5E-26 T 22-04-2016 IPR027375 DKNYY family AMK43_RS10120 787cdd0c6f3c6c612a75b999c304d433 196 SUPERFAMILY SSF54211 5 128 1.93E-36 T 22-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold AMK43_RS10120 787cdd0c6f3c6c612a75b999c304d433 196 Pfam PF01205 Uncharacterized protein family UPF0029 15 120 4.6E-27 T 22-04-2016 IPR001498 Impact, N-terminal AMK43_RS10120 787cdd0c6f3c6c612a75b999c304d433 196 PANTHER PTHR16301 2 188 3.1E-47 T 22-04-2016 IPR023582 Impact family AMK43_RS10120 787cdd0c6f3c6c612a75b999c304d433 196 Gene3D G3DSA:3.30.230.30 2 128 1.8E-39 T 22-04-2016 IPR001498 Impact, N-terminal AMK43_RS04600 46f0005836b23444ec82a6933c427cce 503 Gene3D G3DSA:3.55.50.10 121 182 7.8E-6 T 22-04-2016 AMK43_RS04600 46f0005836b23444ec82a6933c427cce 503 SUPERFAMILY SSF69279 26 184 8.08E-17 T 22-04-2016 AMK43_RS04600 46f0005836b23444ec82a6933c427cce 503 Pfam PF05954 Phage late control gene D protein (GPD) 35 182 1.5E-8 T 22-04-2016 AMK43_RS10850 238f33818590d03563e33802aa29d83e 187 Pfam PF10646 Sporulation and spore germination 81 184 9.0E-6 T 22-04-2016 IPR019606 GerMN domain AMK43_RS00115 3fe85362716a00e85698150fbcd3b089 117 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 14 96 1.0E-14 T 22-04-2016 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0071436 KEGG: 00620+4.1.1.3|MetaCyc: PWY-6339 AMK43_RS03645 c2b4ca4c621cb80b5932dbcbfd5e2547 116 Pfam PF03413 Peptidase propeptide and YPEB domain 55 111 5.1E-7 T 22-04-2016 IPR025711 PepSY domain AMK43_RS04245 e0113e5a1ffb57e1d09d86ca90ee409e 182 Gene3D G3DSA:2.50.20.10 134 178 7.4E-4 T 22-04-2016 AMK43_RS00205 1e4e3944f78f64264ac8b3b862e20b40 389 Pfam PF11899 Protein of unknown function (DUF3419) 15 380 6.2E-63 T 22-04-2016 IPR021829 Protein of unknown function DUF3419 AMK43_RS02805 9d79ac69c1abe549100c52a257032a64 122 SUPERFAMILY SSF63520 21 113 7.46E-8 T 22-04-2016 IPR011608 PRD domain GO:0006355 AMK43_RS02805 9d79ac69c1abe549100c52a257032a64 122 Gene3D G3DSA:1.10.1790.10 19 116 6.6E-8 T 22-04-2016 IPR011608 PRD domain GO:0006355 AMK43_RS02805 9d79ac69c1abe549100c52a257032a64 122 Pfam PF00874 PRD domain 30 113 2.0E-7 T 22-04-2016 IPR011608 PRD domain GO:0006355 AMK43_RS10350 249662a2c45d6b89ecedf00e0f1c765e 328 Pfam PF12889 Protein of unknown function (DUF3829) 43 325 7.5E-43 T 22-04-2016 IPR024291 Protein of unknown function DUF3829 AMK43_RS09700 c147822d1af949e3097e352a308ee945 336 Pfam PF12889 Protein of unknown function (DUF3829) 48 333 9.2E-55 T 22-04-2016 IPR024291 Protein of unknown function DUF3829 AMK43_RS02810 9f3e30111b92442265a41beaa1186211 116 Pfam PF10941 Protein of unknown function DUF2620 1 114 5.9E-46 T 22-04-2016 IPR021238 Protein of unknown function DUF2620 AMK43_RS09245 52b355bf17f671620b58f92003bb08df 315 Pfam PF13228 Domain of unknown function (DUF4037) 130 230 3.7E-39 T 22-04-2016 IPR025117 Domain of unknown function DUF4037 AMK43_RS06255 9b6958dc77d5d9099fc387ac98fbf76e 322 Pfam PF12889 Protein of unknown function (DUF3829) 39 319 2.8E-18 T 22-04-2016 IPR024291 Protein of unknown function DUF3829 AMK43_RS07360 432a529ccaa18d2c5f2031330d7a5aea 101 Pfam PF14131 Domain of unknown function (DUF4298) 7 92 7.8E-29 T 22-04-2016 IPR025384 Protein of unknown function DUF4298 AMK43_RS10125 4f581cf3f9722e9ac80b467f72147560 384 Gene3D G3DSA:1.25.40.10 58 148 1.7E-4 T 22-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 AMK43_RS10125 4f581cf3f9722e9ac80b467f72147560 384 SUPERFAMILY SSF81901 62 143 9.94E-6 T 22-04-2016 AMK43_RS06270 b5bb15b3b138784b8e80c3753b44f81f 150 Gene3D G3DSA:1.10.3290.10 13 131 2.3E-8 T 22-04-2016 IPR003812 Fido domain AMK43_RS06270 b5bb15b3b138784b8e80c3753b44f81f 150 SUPERFAMILY SSF140931 15 117 9.29E-9 T 22-04-2016 IPR003812 Fido domain AMK43_RS03895 23c7cc2b9c3476caf6aed566a2a99653 129 Pfam PF09403 Adhesion protein FadA 1 124 1.0E-26 T 22-04-2016 IPR018543 Adhesion protein FadA AMK43_RS09630 ebfb01a5cb4f51f5e1804dc492057369 203 Pfam PF03413 Peptidase propeptide and YPEB domain 138 198 2.0E-9 T 22-04-2016 IPR025711 PepSY domain AMK43_RS09630 ebfb01a5cb4f51f5e1804dc492057369 203 Pfam PF03413 Peptidase propeptide and YPEB domain 41 102 7.5E-12 T 22-04-2016 IPR025711 PepSY domain AMK43_RS09630 ebfb01a5cb4f51f5e1804dc492057369 203 Gene3D G3DSA:3.10.450.40 43 102 1.2E-4 T 22-04-2016 AMK43_RS01515 b7b06cd4c236fe84fdd85c77eb7fd450 135 Pfam PF09403 Adhesion protein FadA 1 131 8.7E-33 T 22-04-2016 IPR018543 Adhesion protein FadA AMK43_RS04020 300afc3c19c575ca145a18cf1c376885 520 Pfam PF13644 DKNYY family 56 232 1.6E-14 T 22-04-2016 IPR027375 DKNYY family AMK43_RS03695 414343a46ed9c4334c89335a5e8ca4d5 328 Pfam PF00722 Glycosyl hydrolases family 16 113 278 9.1E-8 T 22-04-2016 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 AMK43_RS03695 414343a46ed9c4334c89335a5e8ca4d5 328 Gene3D G3DSA:2.60.120.200 49 324 9.6E-27 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMK43_RS03695 414343a46ed9c4334c89335a5e8ca4d5 328 SUPERFAMILY SSF49899 48 326 1.3E-22 T 22-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain AMK43_RS00065 2b829e283a2405ab1fcff4d6e2db40c9 203 Pfam PF06197 Protein of unknown function (DUF998) 13 196 3.3E-14 T 22-04-2016 IPR009339 Protein of unknown function DUF998 AMK43_RS10945 cd7059f739e7bf1ed8c90bdd7ecca320 61 Gene3D G3DSA:1.10.10.10 7 51 4.3E-4 T 22-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain AMK43_RS02595 58dce34bc264c7ab8e5f27a046d08f77 157 Pfam PF01478 Type IV leader peptidase family 15 121 1.0E-11 T 22-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 AMK43_RS03460 d322209a4f445426e5385b404c06401e 271 Pfam PF02517 CAAX protease self-immunity 125 205 5.4E-16 T 22-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 AMK43_RS03940 797a06d227a53ebb301930f390e6d0ab 120 Pfam PF09685 Domain of unknown function (DUF4870) 21 109 1.3E-7 T 22-04-2016 IPR019109 Protein of unknown function DUF4870 AMK43_RS10980 960c03686de0d04d3276629bc5009987 368 Pfam PF03432 Relaxase/Mobilisation nuclease domain 10 249 5.4E-47 T 22-04-2016 IPR005094 Endonuclease relaxase, MobA/VirD2 AMK43_RS04075 6418c1b148b9c096db716e9552ced152 264 Pfam PF10670 Domain of unknown function (DUF4198) 17 241 5.8E-22 T 22-04-2016 IPR019613 Protein of unknown function DUF4198 AMK43_RS04525 aa7757182c6d19be80ffcdec363d8613 124 SUPERFAMILY SSF53056 4 100 2.09E-5 T 22-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 AMK43_RS10865 c2179661b6d768e140db687636178176 324 Pfam PF13332 Haemagluttinin repeat 82 242 9.2E-10 T 22-04-2016 IPR025157 Haemagluttinin repeat AMK43_RS01000 427251143b72007d11f164f14784f189 310 Pfam PF01757 Acyltransferase family 3 265 1.1E-21 T 22-04-2016 IPR002656 Acyltransferase 3 GO:0016747 AMK43_RS05880 21d51bb0ccbec543ebef8d89dcc0911f 118 Pfam PF01710 Transposase 1 116 6.5E-13 T 22-04-2016 IPR002622 Transposase, Synechocystis PCC 6803 AMK43_RS02090 5a747c2e95b866de3b74eebf53090acc 220 TIGRFAM TIGR02646 TIGR02646: TIGR02646 family protein 24 173 4.9E-22 T 22-04-2016 IPR013467 Conserved hypothetical protein CHP02646 AMK43_RS11380 d469a1ca42d2c3038f9a37ac30df0e97 340 SUPERFAMILY SSF53448 24 275 8.25E-24 T 22-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases AMK43_RS11380 d469a1ca42d2c3038f9a37ac30df0e97 340 Pfam PF05704 Capsular polysaccharide synthesis protein 45 333 8.8E-65 T 22-04-2016 IPR008441 Capsular polysaccharide synthesis AMK43_RS04030 f27c3835423d4e57ec837e84d44122d7 516 Pfam PF13644 DKNYY family 97 258 5.4E-16 T 22-04-2016 IPR027375 DKNYY family AMK43_RS06740 207e637964b6e9f4e6e93f7c2237de54 79 Pfam PF16256 Domain of unknown function (DUF4911) 9 62 4.1E-19 T 22-04-2016 IPR032587 Protein of unknown function DUF4911 AMK43_RS10180 4a3a27d89deb6a9349870576bf250b98 1228 Gene3D G3DSA:2.60.450.10 28 112 7.0E-8 T 22-04-2016 AMK43_RS04265 94a9ce984c269f6818f2143b0f26a1a1 90 Pfam PF04977 Septum formation initiator 15 90 2.2E-13 T 22-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 AMK43_RS02770 ab192a9bb2629cce7d55c22b93e0e92b 232 Pfam PF03787 RAMP superfamily 7 227 1.8E-15 T 22-04-2016 IPR005537 CRISPR type III-associated RAMP protein