LMES_RS00005 PF00308 Bacterial dnaA protein LMES_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix LMES_RS00005 PF11638 DnaA N-terminal domain LMES_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain LMES_RS00010 PF02767 DNA polymerase III beta subunit, central domain LMES_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain LMES_RS00015 PF13275 S4 domain LMES_RS00020 PF02463 RecF/RecN/SMC N terminal domain LMES_RS00025 PF00204 DNA gyrase B LMES_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus LMES_RS00025 PF01751 Toprim domain LMES_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMES_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A LMES_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller LMES_RS00035 PF00255 Glutathione peroxidase LMES_RS00040 PF00072 Response regulator receiver domain LMES_RS00040 PF04397 LytTr DNA-binding domain LMES_RS00045 PF14501 GHKL domain LMES_RS00050 PF00534 Glycosyl transferases group 1 LMES_RS00055 PF00534 Glycosyl transferases group 1 LMES_RS00060 PF16993 LMES_RS00060 LMES_RS00065 PF16929 LMES_RS00065 LMES_RS00070 PF15432 LMES_RS00070 LMES_RS00075 PF03061 Thioesterase superfamily LMES_RS00080 PF00378 Enoyl-CoA hydratase/isomerase family LMES_RS00085 PF00795 Carbon-nitrogen hydrolase LMES_RS00090 PF00155 Aminotransferase class I and II LMES_RS00185 PF07690 Major Facilitator Superfamily LMES_RS00190 PF13242 HAD-hyrolase-like LMES_RS00190 PF13344 Haloacid dehalogenase-like hydrolase LMES_RS00205 PF13673 Acetyltransferase (GNAT) domain LMES_RS00210 PF00884 Sulfatase LMES_RS00215 PF00534 Glycosyl transferases group 1 LMES_RS00220 PF00376 MerR family regulatory protein LMES_RS00225 PF00849 RNA pseudouridylate synthase LMES_RS00230 PF00230 Major intrinsic protein LMES_RS00235 PF00122 E1-E2 ATPase LMES_RS00235 PF00702 haloacid dehalogenase-like hydrolase LMES_RS00240 PF03965 Penicillinase repressor LMES_RS00245 PF00392 Bacterial regulatory proteins, gntR family LMES_RS00250 PF00005 ABC transporter LMES_RS00260 PF00005 ABC transporter LMES_RS00265 PF12679 LMES_RS00265 LMES_RS00280 PF00202 Aminotransferase class-III LMES_RS00285 PF00696 Amino acid kinase family LMES_RS00290 PF01960 ArgJ family LMES_RS00295 PF01118 Semialdehyde dehydrogenase, NAD binding domain LMES_RS00295 PF02774 Semialdehyde dehydrogenase, dimerisation domain LMES_RS00300 PF01161 Phosphatidylethanolamine-binding protein LMES_RS00315 PF02080 TrkA-C domain LMES_RS00315 PF02254 TrkA-N domain LMES_RS00320 PF02386 Cation transport protein LMES_RS00325 PF07690 Major Facilitator Superfamily LMES_RS00330 PF01381 Helix-turn-helix LMES_RS00335 PF01381 Helix-turn-helix LMES_RS00350 PF02517 CAAX protease self-immunity LMES_RS00355 PF00005 ABC transporter LMES_RS00360 PF02653 LMES_RS00360 LMES_RS00365 PF02653 LMES_RS00365 LMES_RS00370 PF00056 lactate/malate dehydrogenase, NAD binding domain LMES_RS00370 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain LMES_RS00375 PF00005 ABC transporter LMES_RS00380 PF02653 LMES_RS00380 LMES_RS00385 PF04392 ABC transporter substrate binding protein LMES_RS00390 PF01381 Helix-turn-helix LMES_RS00395 PF00106 short chain dehydrogenase LMES_RS00400 PF13437 HlyD family secretion protein LMES_RS00405 PF00005 ABC transporter LMES_RS00405 PF00664 ABC transporter transmembrane region LMES_RS00405 PF03412 Peptidase C39 family LMES_RS00415 PF10439 LMES_RS00415 LMES_RS00425 PF00072 Response regulator receiver domain LMES_RS00425 PF04397 LytTr DNA-binding domain LMES_RS00430 PF14501 GHKL domain LMES_RS00435 PF08543 Phosphomethylpyrimidine kinase LMES_RS00440 PF07155 ECF-type riboflavin transporter, S component LMES_RS00445 PF00890 FAD binding domain LMES_RS00450 PF00005 ABC transporter LMES_RS00450 PF01381 Helix-turn-helix LMES_RS00460 PF13231 LMES_RS00460 LMES_RS00465 PF00535 Glycosyl transferase family 2 LMES_RS00470 PF04138 LMES_RS00470 LMES_RS00475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LMES_RS00475 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMES_RS00480 PF07274 LMES_RS00480 LMES_RS00485 PF13409 Glutathione S-transferase, N-terminal domain LMES_RS00485 PF13410 Glutathione S-transferase, C-terminal domain LMES_RS00490 PF03972 MmgE/PrpD family LMES_RS00495 PF13673 Acetyltransferase (GNAT) domain LMES_RS00500 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS00505 PF00005 ABC transporter LMES_RS00510 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMES_RS00515 PF01546 Peptidase family M20/M25/M40 LMES_RS00515 PF07687 Peptidase dimerisation domain LMES_RS00520 PF00085 Thioredoxin LMES_RS00525 PF04199 Putative cyclase LMES_RS00530 PF13520 Amino acid permease LMES_RS00535 PF13561 Enoyl-(Acyl carrier protein) reductase LMES_RS00540 PF03180 NLPA lipoprotein LMES_RS00545 PF01266 FAD dependent oxidoreductase LMES_RS00550 PF02537 LMES_RS00550 LMES_RS00555 PF02537 LMES_RS00555 LMES_RS00560 PF02645 Uncharacterised protein, DegV family COG1307 LMES_RS00565 PF03006 LMES_RS00565 LMES_RS00570 PF00083 Sugar (and other) transporter LMES_RS00575 PF00480 ROK family LMES_RS00585 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LMES_RS00585 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LMES_RS00595 PF02673 LMES_RS00595 LMES_RS00600 PF01208 Uroporphyrinogen decarboxylase (URO-D) LMES_RS00605 PF01208 Uroporphyrinogen decarboxylase (URO-D) LMES_RS00610 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMES_RS00615 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS00620 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS00625 PF00005 ABC transporter LMES_RS00630 PF00009 Elongation factor Tu GTP binding domain LMES_RS00630 PF03144 Elongation factor Tu domain 2 LMES_RS00630 PF16658 LMES_RS00630 LMES_RS00640 PF12822 Protein of unknown function (DUF3816) LMES_RS00645 PF08543 Phosphomethylpyrimidine kinase LMES_RS00655 PF13561 Enoyl-(Acyl carrier protein) reductase LMES_RS00660 PF00171 Aldehyde dehydrogenase family LMES_RS00660 PF00465 Iron-containing alcohol dehydrogenase LMES_RS00665 PF01938 TRAM domain LMES_RS00665 PF05958 tRNA (Uracil-5-)-methyltransferase LMES_RS00670 PF06197 LMES_RS00670 LMES_RS00680 PF00004 ATPase family associated with various cellular activities (AAA) LMES_RS00680 PF02151 UvrB/uvrC motif LMES_RS00680 PF07724 AAA domain (Cdc48 subfamily) LMES_RS00680 PF10431 C-terminal, D2-small domain, of ClpB protein LMES_RS00685 PF04245 LMES_RS00685 LMES_RS00690 PF00293 NUDIX domain LMES_RS00690 PF08837 Protein of unknown function (DUF1810) LMES_RS00695 PF00206 Lyase LMES_RS00695 PF10415 Fumarase C C-terminus LMES_RS00700 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LMES_RS00705 PF14542 GCN5-related N-acetyl-transferase LMES_RS00710 PF00692 dUTPase LMES_RS00715 PF13481 AAA domain LMES_RS00715 PF13541 Subunit ChlI of Mg-chelatase LMES_RS00720 PF12698 ABC-2 family transporter protein LMES_RS00725 PF00440 Bacterial regulatory proteins, tetR family LMES_RS00730 PF00749 tRNA synthetases class I (E and Q), catalytic domain LMES_RS00735 PF01406 tRNA synthetases class I (C) catalytic domain LMES_RS00735 PF09190 DALR domain LMES_RS00835 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LMES_RS00835 PF02403 Seryl-tRNA synthetase N-terminal domain LMES_RS00840 PF00271 Helicase conserved C-terminal domain LMES_RS00840 PF01043 SecA preprotein cross-linking domain LMES_RS00840 PF07516 SecA Wing and Scaffold domain LMES_RS00840 PF07517 SecA DEAD-like domain LMES_RS00845 PF00472 RF-1 domain LMES_RS00845 PF03462 PCRF domain LMES_RS00850 PF00004 ATPase family associated with various cellular activities (AAA) LMES_RS00850 PF02151 UvrB/uvrC motif LMES_RS00850 PF02861 Clp amino terminal domain LMES_RS00850 PF07724 AAA domain (Cdc48 subfamily) LMES_RS00850 PF10431 C-terminal, D2-small domain, of ClpB protein LMES_RS00855 PF00164 Ribosomal protein S12/S23 LMES_RS00860 PF00177 Ribosomal protein S7p/S5e LMES_RS00865 PF00009 Elongation factor Tu GTP binding domain LMES_RS00865 PF00679 Elongation factor G C-terminus LMES_RS00865 PF03144 Elongation factor Tu domain 2 LMES_RS00865 PF03764 Elongation factor G, domain IV LMES_RS00865 PF14492 Elongation Factor G, domain II LMES_RS00870 PF07690 Major Facilitator Superfamily LMES_RS00875 PF00005 ABC transporter LMES_RS00875 PF08402 TOBE domain LMES_RS00880 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS00885 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS00890 PF13416 Bacterial extracellular solute-binding protein LMES_RS00895 PF00338 Ribosomal protein S10p/S20e LMES_RS00900 PF00297 Ribosomal protein L3 LMES_RS00905 PF00573 Ribosomal protein L4/L1 family LMES_RS00910 PF00276 Ribosomal protein L23 LMES_RS00915 PF00181 Ribosomal Proteins L2, RNA binding domain LMES_RS00915 PF03947 Ribosomal Proteins L2, C-terminal domain LMES_RS00920 PF00203 Ribosomal protein S19 LMES_RS00925 PF00237 Ribosomal protein L22p/L17e LMES_RS00930 PF00189 Ribosomal protein S3, C-terminal domain LMES_RS00930 PF07650 KH domain LMES_RS00935 PF00252 Ribosomal protein L16p/L10e LMES_RS00940 PF00831 Ribosomal L29 protein LMES_RS00945 PF00366 Ribosomal protein S17 LMES_RS00950 PF00238 Ribosomal protein L14p/L23e LMES_RS00955 PF00467 KOW motif LMES_RS00955 PF17136 LMES_RS00955 LMES_RS00960 PF00281 Ribosomal protein L5 LMES_RS00960 PF00673 ribosomal L5P family C-terminus LMES_RS00965 PF00410 Ribosomal protein S8 LMES_RS00970 PF00347 Ribosomal protein L6 LMES_RS00975 PF00861 Ribosomal L18p/L5e family LMES_RS00980 PF00333 Ribosomal protein S5, N-terminal domain LMES_RS00980 PF03719 Ribosomal protein S5, C-terminal domain LMES_RS00985 PF00327 Ribosomal protein L30p/L7e LMES_RS00990 PF00828 Ribosomal protein L18e/L15 LMES_RS00995 PF00344 SecY translocase LMES_RS01000 PF00406 Adenylate kinase LMES_RS01005 PF01176 Translation initiation factor 1A / IF-1 LMES_RS01010 PF00444 Ribosomal protein L36 LMES_RS01015 PF00416 Ribosomal protein S13/S18 LMES_RS01020 PF00411 Ribosomal protein S11 LMES_RS01025 PF01000 RNA polymerase Rpb3/RpoA insert domain LMES_RS01025 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain LMES_RS01025 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain LMES_RS01030 PF01196 Ribosomal protein L17 LMES_RS01035 PF00348 Polyprenyl synthetase LMES_RS01040 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMES_RS01045 PF00005 ABC transporter LMES_RS01050 PF00005 ABC transporter LMES_RS01055 PF02361 Cobalt transport protein LMES_RS01060 PF01416 tRNA pseudouridine synthase LMES_RS01065 PF01243 Pyridoxamine 5'-phosphate oxidase LMES_RS01070 PF00572 Ribosomal protein L13 LMES_RS01075 PF00380 Ribosomal protein S9/S16 LMES_RS01105 PF00121 Triosephosphate isomerase LMES_RS01110 PF00113 Enolase, C-terminal TIM barrel domain LMES_RS01110 PF03952 Enolase, N-terminal domain LMES_RS01115 PF03352 Methyladenine glycosylase LMES_RS01120 PF01966 HD domain LMES_RS01120 PF02541 Ppx/GppA phosphatase family LMES_RS01125 PF02503 Polyphosphate kinase middle domain LMES_RS01125 PF13089 Polyphosphate kinase N-terminal domain LMES_RS01125 PF13090 Polyphosphate kinase C-terminal domain LMES_RS01130 PF02541 Ppx/GppA phosphatase family LMES_RS01135 PF01205 Uncharacterized protein family UPF0029 LMES_RS01135 PF09186 Domain of unknown function (DUF1949) LMES_RS01140 PF00271 Helicase conserved C-terminal domain LMES_RS01140 PF04851 Type III restriction enzyme, res subunit LMES_RS01145 PF00156 Phosphoribosyl transferase domain LMES_RS01150 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein LMES_RS01150 PF16321 LMES_RS01150 LMES_RS01155 PF12698 ABC-2 family transporter protein LMES_RS01160 PF00300 Histidine phosphatase superfamily (branch 1) LMES_RS01165 PF00571 CBS domain LMES_RS01165 PF01595 LMES_RS01165 LMES_RS01165 PF03471 Transporter associated domain LMES_RS01170 PF00462 Glutaredoxin LMES_RS01175 PF00317 Ribonucleotide reductase, all-alpha domain LMES_RS01175 PF02867 Ribonucleotide reductase, barrel domain LMES_RS01175 PF08343 Ribonucleotide reductase N-terminal LMES_RS01180 PF07972 NrdI Flavodoxin like LMES_RS01185 PF00268 Ribonucleotide reductase, small chain LMES_RS01190 PF01569 PAP2 superfamily LMES_RS01195 PF02558 Ketopantoate reductase PanE/ApbA LMES_RS01195 PF08546 Ketopantoate reductase PanE/ApbA C terminal LMES_RS01200 PF04892 LMES_RS01200 LMES_RS01205 PF06723 MreB/Mbl protein LMES_RS01210 PF11184 LMES_RS01210 LMES_RS01215 PF01098 LMES_RS01215 LMES_RS01220 PF10978 LMES_RS01220 LMES_RS01225 PF01820 D-ala D-ala ligase N-terminus LMES_RS01225 PF07478 D-ala D-ala ligase C-terminus LMES_RS01230 PF00440 Bacterial regulatory proteins, tetR family LMES_RS01235 PF00584 SecE/Sec61-gamma subunits of protein translocation complex LMES_RS01240 PF00467 KOW motif LMES_RS01240 PF02357 Transcription termination factor nusG LMES_RS01245 PF00298 Ribosomal protein L11, RNA binding domain LMES_RS01245 PF03946 Ribosomal protein L11, N-terminal domain LMES_RS01250 PF00687 Ribosomal protein L1p/L10e family LMES_RS01255 PF00466 Ribosomal protein L10 LMES_RS01260 PF00542 Ribosomal protein L7/L12 C-terminal domain LMES_RS01260 PF16320 LMES_RS01260 LMES_RS01265 PF05175 Methyltransferase small domain LMES_RS01270 PF14437 LMES_RS01270 LMES_RS01275 PF01966 HD domain LMES_RS01280 PF13177 DNA polymerase III, delta subunit LMES_RS01285 PF02132 RecR protein LMES_RS01285 PF13662 Toprim domain LMES_RS01290 PF10704 LMES_RS01290 LMES_RS01295 PF02223 Thymidylate kinase LMES_RS01300 PF06153 Protein of unknown function (DUF970) LMES_RS01305 PF13177 DNA polymerase III, delta subunit LMES_RS01310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases LMES_RS01315 PF01643 Acyl-ACP thioesterase LMES_RS01320 PF01370 NAD dependent epimerase/dehydratase family LMES_RS01325 PF04023 FeoA domain LMES_RS01330 PF02421 Ferrous iron transport protein B LMES_RS01330 PF07664 LMES_RS01330 LMES_RS01330 PF07670 Nucleoside recognition LMES_RS01335 PF00356 Bacterial regulatory proteins, lacI family LMES_RS01335 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family LMES_RS01340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LMES_RS01340 PF00367 phosphotransferase system, EIIB LMES_RS01340 PF02378 Phosphotransferase system, EIIC LMES_RS01345 PF00251 Glycosyl hydrolases family 32 N-terminal domain LMES_RS01350 PF00480 ROK family LMES_RS01360 PF02557 D-alanyl-D-alanine carboxypeptidase LMES_RS01365 PF01712 Deoxynucleoside kinase LMES_RS01370 PF00696 Amino acid kinase family LMES_RS01375 PF00171 Aldehyde dehydrogenase family LMES_RS01380 PF01156 Inosine-uridine preferring nucleoside hydrolase LMES_RS01385 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMES_RS01390 PF13930 DNA/RNA non-specific endonuclease LMES_RS01395 PF01966 HD domain LMES_RS01400 PF01588 Putative tRNA binding domain LMES_RS01400 PF09334 tRNA synthetases class I (M) LMES_RS01405 PF02237 Biotin protein ligase C terminal domain LMES_RS01405 PF03099 Biotin/lipoate A/B protein ligase family LMES_RS01405 PF08279 HTH domain LMES_RS01410 PF02632 BioY family LMES_RS01415 PF00202 Aminotransferase class-III LMES_RS01420 PF13500 AAA domain LMES_RS01425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain LMES_RS01425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain LMES_RS01430 PF00149 Calcineurin-like phosphoesterase LMES_RS01435 PF07977 FabA-like domain LMES_RS01440 PF01047 MarR family LMES_RS01445 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LMES_RS01445 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LMES_RS01450 PF00550 Phosphopantetheine attachment site LMES_RS01455 PF03060 Nitronate monooxygenase LMES_RS01460 PF00698 Acyl transferase domain LMES_RS01465 PF13561 Enoyl-(Acyl carrier protein) reductase LMES_RS01470 PF00109 Beta-ketoacyl synthase, N-terminal domain LMES_RS01470 PF02801 Beta-ketoacyl synthase, C-terminal domain LMES_RS01475 PF00364 Biotin-requiring enzyme LMES_RS01480 PF07977 FabA-like domain LMES_RS01485 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain LMES_RS01485 PF02785 Biotin carboxylase C-terminal domain LMES_RS01485 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LMES_RS01490 PF01039 Carboxyl transferase domain LMES_RS01495 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit LMES_RS01500 PF08877 MepB protein LMES_RS01505 PF00133 tRNA synthetases class I (I, L, M and V) LMES_RS01505 PF08264 Anticodon-binding domain of tRNA LMES_RS01505 PF10458 Valyl tRNA synthetase tRNA binding arm LMES_RS01510 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal LMES_RS01510 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III LMES_RS01515 PF00188 Cysteine-rich secretory protein family LMES_RS01515 PF01476 LysM domain LMES_RS01520 PF00877 NlpC/P60 family LMES_RS01525 PF00188 Cysteine-rich secretory protein family LMES_RS01525 PF01476 LysM domain LMES_RS01530 PF02388 FemAB family LMES_RS01535 PF00905 Penicillin binding protein transpeptidase domain LMES_RS01535 PF03717 Penicillin-binding Protein dimerisation domain LMES_RS01540 PF12840 Helix-turn-helix domain LMES_RS01545 PF07853 LMES_RS01545 LMES_RS01545 PF13630 LMES_RS01545 LMES_RS01550 PF00005 ABC transporter LMES_RS01550 PF02687 LMES_RS01550 LMES_RS01550 PF12704 MacB-like periplasmic core domain LMES_RS01555 PF03816 Cell envelope-related transcriptional attenuator domain LMES_RS01560 PF04304 LMES_RS01560 LMES_RS01565 PF02541 Ppx/GppA phosphatase family LMES_RS01570 PF00368 Hydroxymethylglutaryl-coenzyme A reductase LMES_RS01580 PF02146 Sir2 family LMES_RS01585 PF01545 Cation efflux family LMES_RS01590 PF01566 LMES_RS01590 LMES_RS01595 PF00582 Universal stress protein family LMES_RS01600 PF01022 Bacterial regulatory protein, arsR family LMES_RS01610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMES_RS01615 PF01156 Inosine-uridine preferring nucleoside hydrolase LMES_RS01620 PF02527 rRNA small subunit methyltransferase G LMES_RS01625 PF13614 AAA domain LMES_RS01630 PF02195 ParB-like nuclease domain LMES_RS01635 PF06107 LMES_RS01635 LMES_RS01640 PF01926 50S ribosome-binding GTPase LMES_RS01640 PF06071 Protein of unknown function (DUF933) LMES_RS01645 PF06570 LMES_RS01645 LMES_RS01650 PF00072 Response regulator receiver domain LMES_RS01650 PF00486 Transcriptional regulatory protein, C terminal LMES_RS01655 PF00512 His Kinase A (phospho-acceptor) domain LMES_RS01655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMES_RS01660 PF00768 D-alanyl-D-alanine carboxypeptidase LMES_RS01665 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase LMES_RS01670 PF00342 Phosphoglucose isomerase LMES_RS01675 PF00392 Bacterial regulatory proteins, gntR family LMES_RS01675 PF02080 TrkA-C domain LMES_RS01680 PF00005 ABC transporter LMES_RS01680 PF00571 CBS domain LMES_RS01685 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS01685 PF04069 Substrate binding domain of ABC-type glycine betaine transport system LMES_RS01695 PF12698 ABC-2 family transporter protein LMES_RS01700 PF00005 ABC transporter LMES_RS01700 PF13732 LMES_RS01700 LMES_RS01710 PF01381 Helix-turn-helix LMES_RS01730 PF00857 Isochorismatase family LMES_RS01735 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS01740 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMES_RS01745 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS01750 PF00005 ABC transporter LMES_RS01755 PF00155 Aminotransferase class I and II LMES_RS01760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMES_RS01760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMES_RS01765 PF00005 ABC transporter LMES_RS01770 PF07690 Major Facilitator Superfamily LMES_RS01775 PF01702 Queuine tRNA-ribosyltransferase LMES_RS01780 PF02699 Preprotein translocase subunit LMES_RS01785 PF00561 alpha/beta hydrolase fold LMES_RS01790 PF03706 LMES_RS01790 LMES_RS01790 PF09924 Uncharacterized conserved protein (DUF2156) LMES_RS01795 PF12917 HD containing hydrolase-like enzyme LMES_RS01800 PF00293 NUDIX domain LMES_RS01805 PF00300 Histidine phosphatase superfamily (branch 1) LMES_RS01810 PF07690 Major Facilitator Superfamily LMES_RS01815 PF00128 Alpha amylase, catalytic domain LMES_RS01820 PF00005 ABC transporter LMES_RS01820 PF00664 ABC transporter transmembrane region LMES_RS01825 PF00005 ABC transporter LMES_RS01825 PF00664 ABC transporter transmembrane region LMES_RS01830 PF00534 Glycosyl transferases group 1 LMES_RS01830 PF13439 Glycosyltransferase Family 4 LMES_RS01835 PF00534 Glycosyl transferases group 1 LMES_RS01835 PF13439 Glycosyltransferase Family 4 LMES_RS01840 PF03706 LMES_RS01840 LMES_RS01845 PF08796 Protein of unknown function (DUF1797) LMES_RS01850 PF00884 Sulfatase LMES_RS01855 PF00271 Helicase conserved C-terminal domain LMES_RS01855 PF02151 UvrB/uvrC motif LMES_RS01855 PF04851 Type III restriction enzyme, res subunit LMES_RS01855 PF12344 Ultra-violet resistance protein B LMES_RS01860 PF00005 ABC transporter LMES_RS01865 PF01933 Uncharacterised protein family UPF0052 LMES_RS01870 PF02650 WhiA C-terminal HTH domain LMES_RS01870 PF10298 WhiA N-terminal LAGLIDADG-like domain LMES_RS01870 PF14527 WhiA LAGLIDADG-like domain LMES_RS01875 PF00574 Clp protease LMES_RS01880 PF00571 CBS domain LMES_RS01885 PF01195 Peptidyl-tRNA hydrolase LMES_RS01890 PF00270 DEAD/DEAH box helicase LMES_RS01890 PF00271 Helicase conserved C-terminal domain LMES_RS01890 PF02559 CarD-like/TRCF domain LMES_RS01890 PF03461 TRCF domain LMES_RS01895 PF01479 S4 domain LMES_RS01900 PF04977 Septum formation initiator LMES_RS01905 PF01171 PP-loop family LMES_RS01910 PF00156 Phosphoribosyl transferase domain LMES_RS01915 PF00004 ATPase family associated with various cellular activities (AAA) LMES_RS01915 PF01434 Peptidase family M41 LMES_RS01915 PF06480 FtsH Extracellular LMES_RS01920 PF01430 Hsp33 protein LMES_RS01925 PF00152 tRNA synthetases class II (D, K and N) LMES_RS01925 PF01336 OB-fold nucleic acid binding domain LMES_RS01945 PF00849 RNA pseudouridylate synthase LMES_RS01950 PF01709 Transcriptional regulator LMES_RS01955 PF00762 Ferrochelatase LMES_RS01965 PF00860 Permease family LMES_RS01970 PF00005 ABC transporter LMES_RS01980 PF04397 LytTr DNA-binding domain LMES_RS01985 PF11457 LMES_RS01985 LMES_RS01990 PF01131 DNA topoisomerase LMES_RS01990 PF01751 Toprim domain LMES_RS01995 PF07690 Major Facilitator Superfamily LMES_RS02000 PF00440 Bacterial regulatory proteins, tetR family LMES_RS02005 PF00842 Alanine racemase, C-terminal domain LMES_RS02005 PF01168 Alanine racemase, N-terminal domain LMES_RS02015 PF04608 Phosphatidylglycerophosphatase A LMES_RS02020 PF01979 Amidohydrolase family LMES_RS02025 PF00392 Bacterial regulatory proteins, gntR family LMES_RS02025 PF07702 UTRA domain LMES_RS02030 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS02035 PF00005 ABC transporter LMES_RS02035 PF09383 NIL domain LMES_RS02040 PF01546 Peptidase family M20/M25/M40 LMES_RS02040 PF07687 Peptidase dimerisation domain LMES_RS02045 PF03180 NLPA lipoprotein LMES_RS02050 PF03180 NLPA lipoprotein LMES_RS02055 PF06912 LMES_RS02055 LMES_RS02060 PF09972 LMES_RS02060 LMES_RS02065 PF00122 E1-E2 ATPase LMES_RS02065 PF00689 Cation transporting ATPase, C-terminus LMES_RS02065 PF00690 Cation transporter/ATPase, N-terminus LMES_RS02065 PF00702 haloacid dehalogenase-like hydrolase LMES_RS02080 PF02608 Basic membrane protein LMES_RS02085 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMES_RS02085 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS02090 PF00005 ABC transporter LMES_RS02095 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMES_RS02095 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS02100 PF06054 LMES_RS02100 LMES_RS02105 PF01432 Peptidase family M3 LMES_RS02105 PF08439 Oligopeptidase F LMES_RS02110 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LMES_RS02115 PF05014 Nucleoside 2-deoxyribosyltransferase LMES_RS02120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMES_RS02120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMES_RS02125 PF01638 HxlR-like helix-turn-helix LMES_RS02130 PF01409 tRNA synthetases class II core domain (F) LMES_RS02130 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain LMES_RS02135 PF01588 Putative tRNA binding domain LMES_RS02135 PF03147 Ferredoxin-fold anticodon binding domain LMES_RS02135 PF03483 B3/4 domain LMES_RS02135 PF03484 tRNA synthetase B5 domain LMES_RS02140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LMES_RS02145 PF01197 Ribosomal protein L31 LMES_RS02150 PF05958 tRNA (Uracil-5-)-methyltransferase LMES_RS02155 PF01225 Mur ligase family, catalytic domain LMES_RS02155 PF02875 Mur ligase family, glutamate ligase domain LMES_RS02155 PF08245 Mur ligase middle domain LMES_RS02160 PF00144 Beta-lactamase LMES_RS02165 PF00270 DEAD/DEAH box helicase LMES_RS02165 PF00271 Helicase conserved C-terminal domain LMES_RS02170 PF08245 Mur ligase middle domain LMES_RS02175 PF07690 Major Facilitator Superfamily LMES_RS02180 PF04002 RadC-like JAB domain LMES_RS02185 PF00303 Thymidylate synthase LMES_RS02190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LMES_RS02195 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain LMES_RS02195 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain LMES_RS02200 PF00437 Type II/IV secretion system protein LMES_RS02205 PF00482 Type II secretion system (T2SS), protein F LMES_RS02210 PF13544 LMES_RS02210 LMES_RS02235 PF02384 N-6 DNA Methylase LMES_RS02240 PF00871 Acetokinase family LMES_RS02245 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LMES_RS02245 PF02618 YceG-like family LMES_RS02250 PF06800 LMES_RS02250 LMES_RS02255 PF01272 Transcription elongation factor, GreA/GreB, C-term LMES_RS02255 PF03449 Transcription elongation factor, N-terminal LMES_RS02260 PF09586 LMES_RS02260 LMES_RS02265 PF13460 NADH(P)-binding LMES_RS02270 PF07728 AAA domain (dynein-related subfamily) LMES_RS02275 PF09967 LMES_RS02275 LMES_RS02290 PF13458 Periplasmic binding protein LMES_RS02295 PF02653 LMES_RS02295 LMES_RS02300 PF02653 LMES_RS02300 LMES_RS02305 PF00005 ABC transporter LMES_RS02305 PF12399 Branched-chain amino acid ATP-binding cassette transporter LMES_RS02310 PF00005 ABC transporter LMES_RS02315 PF02110 Hydroxyethylthiazole kinase family LMES_RS02320 PF08543 Phosphomethylpyrimidine kinase LMES_RS02325 PF02581 Thiamine monophosphate synthase/TENI LMES_RS02330 PF00171 Aldehyde dehydrogenase family LMES_RS02335 PF06210 LMES_RS02335 LMES_RS02340 PF01432 Peptidase family M3 LMES_RS02340 PF08439 Oligopeptidase F LMES_RS02345 PF12146 Putative lysophospholipase LMES_RS02350 PF01475 Ferric uptake regulator family LMES_RS02355 PF01988 LMES_RS02355 LMES_RS02360 PF01988 LMES_RS02360 LMES_RS02365 PF03631 LMES_RS02365 LMES_RS02370 PF06335 Protein of unknown function (DUF1054) LMES_RS02375 PF00999 Sodium/hydrogen exchanger family LMES_RS02380 PF00356 Bacterial regulatory proteins, lacI family LMES_RS02380 PF13377 Periplasmic binding protein-like domain LMES_RS02390 PF01261 Xylose isomerase-like TIM barrel LMES_RS02400 PF00294 pfkB family carbohydrate kinase LMES_RS02405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMES_RS02405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMES_RS02410 PF01433 Peptidase family M1 LMES_RS02410 PF11838 ERAP1-like C-terminal domain LMES_RS02415 PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family LMES_RS02420 PF02129 X-Pro dipeptidyl-peptidase (S15 family) LMES_RS02420 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain LMES_RS02420 PF09168 X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal LMES_RS02425 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LMES_RS02430 PF00367 phosphotransferase system, EIIB LMES_RS02430 PF02378 Phosphotransferase system, EIIC LMES_RS02435 PF00128 Alpha amylase, catalytic domain LMES_RS02440 PF00392 Bacterial regulatory proteins, gntR family LMES_RS02440 PF07702 UTRA domain LMES_RS02445 PF01966 HD domain LMES_RS02450 PF09148 Domain of unknown function (DUF1934) LMES_RS02455 PF05066 HB1, ASXL, restriction endonuclease HTH domain LMES_RS02465 PF00324 Amino acid permease LMES_RS02470 PF02632 BioY family LMES_RS02475 PF02237 Biotin protein ligase C terminal domain LMES_RS02475 PF03099 Biotin/lipoate A/B protein ligase family LMES_RS02475 PF08279 HTH domain LMES_RS02480 PF00117 Glutamine amidotransferase class-I LMES_RS02480 PF06418 CTP synthase N-terminus LMES_RS02485 PF01541 GIY-YIG catalytic domain LMES_RS02485 PF02151 UvrB/uvrC motif LMES_RS02485 PF08459 UvrC Helix-hairpin-helix N-terminal LMES_RS02485 PF14520 Helix-hairpin-helix domain LMES_RS02490 PF01018 GTP1/OBG LMES_RS02490 PF01926 50S ribosome-binding GTPase LMES_RS02490 PF09269 Domain of unknown function (DUF1967) LMES_RS02495 PF00205 Thiamine pyrophosphate enzyme, central domain LMES_RS02495 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LMES_RS02495 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LMES_RS02505 PF02073 Thermophilic metalloprotease (M29) LMES_RS02510 PF01183 Glycosyl hydrolases family 25 LMES_RS02515 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LMES_RS02520 PF00270 DEAD/DEAH box helicase LMES_RS02520 PF00271 Helicase conserved C-terminal domain LMES_RS02525 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain LMES_RS02525 PF06827 Zinc finger found in FPG and IleRS LMES_RS02525 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain LMES_RS02530 PF06161 LMES_RS02530 LMES_RS02535 PF01121 Dephospho-CoA kinase LMES_RS02540 PF07261 Replication initiation and membrane attachment LMES_RS02545 PF01695 IstB-like ATP binding protein LMES_RS02545 PF07319 Primosomal protein DnaI N-terminus LMES_RS02550 PF07907 LMES_RS02550 LMES_RS02555 PF07907 LMES_RS02555 LMES_RS02570 PF00270 DEAD/DEAH box helicase LMES_RS02570 PF00271 Helicase conserved C-terminal domain LMES_RS02570 PF17191 LMES_RS02570 LMES_RS02575 PF02504 Fatty acid synthesis protein LMES_RS02580 PF00550 Phosphopantetheine attachment site LMES_RS02585 PF10263 LMES_RS02585 LMES_RS02590 PF08282 haloacid dehalogenase-like hydrolase LMES_RS02600 PF02517 CAAX protease self-immunity LMES_RS02605 PF00557 Metallopeptidase family M24 LMES_RS02605 PF01321 Creatinase/Prolidase N-terminal domain LMES_RS02610 PF00356 Bacterial regulatory proteins, lacI family LMES_RS02610 PF13377 Periplasmic binding protein-like domain LMES_RS02615 PF01757 LMES_RS02615 LMES_RS02620 PF07690 Major Facilitator Superfamily LMES_RS02625 PF00999 Sodium/hydrogen exchanger family LMES_RS02630 PF00892 EamA-like transporter family LMES_RS02635 PF03306 Alpha-acetolactate decarboxylase LMES_RS02640 PF01380 SIS domain LMES_RS02640 PF01418 Helix-turn-helix domain, rpiR family LMES_RS02645 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LMES_RS02645 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LMES_RS02650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LMES_RS02650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LMES_RS02655 PF02447 LMES_RS02655 LMES_RS02660 PF13520 Amino acid permease LMES_RS02665 PF00202 Aminotransferase class-III LMES_RS02670 PF01411 tRNA synthetases class II (A) LMES_RS02670 PF02272 DHHA1 domain LMES_RS02670 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LMES_RS02675 PF06135 LMES_RS02675 LMES_RS02680 PF03652 Uncharacterised protein family (UPF0081) LMES_RS02685 PF06949 LMES_RS02685 LMES_RS02690 PF01654 LMES_RS02690 LMES_RS02695 PF02322 LMES_RS02695 LMES_RS02700 PF00005 ABC transporter LMES_RS02700 PF00664 ABC transporter transmembrane region LMES_RS02705 PF00005 ABC transporter LMES_RS02710 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase LMES_RS02715 PF13302 Acetyltransferase (GNAT) domain LMES_RS02720 PF00580 UvrD/REP helicase N-terminal domain LMES_RS02720 PF13361 UvrD-like helicase C-terminal domain LMES_RS02725 PF13671 AAA domain LMES_RS02730 PF00533 BRCA1 C Terminus (BRCT) domain LMES_RS02730 PF01653 NAD-dependent DNA ligase adenylation domain LMES_RS02730 PF03119 NAD-dependent DNA ligase C4 zinc finger domain LMES_RS02730 PF03120 NAD-dependent DNA ligase OB-fold domain LMES_RS02730 PF12826 Helix-hairpin-helix motif LMES_RS02730 PF14520 Helix-hairpin-helix domain LMES_RS02735 PF07537 CamS sex pheromone cAM373 precursor LMES_RS02740 PF06458 MucBP domain LMES_RS02745 PF00004 ATPase family associated with various cellular activities (AAA) LMES_RS02745 PF02151 UvrB/uvrC motif LMES_RS02745 PF07724 AAA domain (Cdc48 subfamily) LMES_RS02745 PF10431 C-terminal, D2-small domain, of ClpB protein LMES_RS02750 PF06723 MreB/Mbl protein LMES_RS02755 PF04085 rod shape-determining protein MreC LMES_RS02760 PF04093 LMES_RS02760 LMES_RS02765 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS02770 PF00005 ABC transporter LMES_RS02775 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMES_RS02780 PF13091 PLD-like domain LMES_RS02780 PF13396 LMES_RS02780 LMES_RS02785 PF05193 Peptidase M16 inactive domain LMES_RS02790 PF00675 Insulinase (Peptidase family M16) LMES_RS02790 PF05193 Peptidase M16 inactive domain LMES_RS02795 PF13413 Helix-turn-helix domain LMES_RS02800 PF01066 CDP-alcohol phosphatidyltransferase LMES_RS02805 PF00154 recA bacterial DNA recombination protein LMES_RS02810 PF00072 Response regulator receiver domain LMES_RS02810 PF00486 Transcriptional regulatory protein, C terminal LMES_RS02815 PF12849 PBP superfamily domain LMES_RS02820 PF00512 His Kinase A (phospho-acceptor) domain LMES_RS02820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMES_RS02825 PF12849 PBP superfamily domain LMES_RS02830 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS02835 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS02840 PF00005 ABC transporter LMES_RS02845 PF00005 ABC transporter LMES_RS02850 PF01895 PhoU domain LMES_RS02855 PF03600 Citrate transporter LMES_RS02860 PF04020 LMES_RS02860 LMES_RS02865 PF02603 HPr Serine kinase N terminus LMES_RS02865 PF07475 HPr Serine kinase C-terminal domain LMES_RS02870 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus LMES_RS02870 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus LMES_RS02875 PF00483 Nucleotidyl transferase LMES_RS02880 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMES_RS02885 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily LMES_RS02895 PF00107 Zinc-binding dehydrogenase LMES_RS02895 PF08240 Alcohol dehydrogenase GroES-like domain LMES_RS02900 PF00356 Bacterial regulatory proteins, lacI family LMES_RS02900 PF13407 Periplasmic binding protein domain LMES_RS02905 PF09335 LMES_RS02905 LMES_RS02910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LMES_RS02910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LMES_RS02910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LMES_RS02910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LMES_RS02915 PF01245 Ribosomal protein L19 LMES_RS02920 PF10702 Protein of unknown function (DUF2507) LMES_RS02925 PF01177 Asp/Glu/Hydantoin racemase LMES_RS02930 PF01725 Ham1 family LMES_RS02935 PF12850 Calcineurin-like phosphoesterase superfamily domain LMES_RS02940 PF05491 Holliday junction DNA helicase ruvB C-terminus LMES_RS02940 PF05496 Holliday junction DNA helicase ruvB N-terminus LMES_RS02945 PF12850 Calcineurin-like phosphoesterase superfamily domain LMES_RS02950 PF02547 Queuosine biosynthesis protein LMES_RS02955 PF03009 Glycerophosphoryl diester phosphodiesterase family LMES_RS02960 PF01330 RuvA N terminal domain LMES_RS02960 PF07499 RuvA, C-terminal domain LMES_RS02960 PF14520 Helix-hairpin-helix domain LMES_RS02965 PF01712 Deoxynucleoside kinase LMES_RS02970 PF01741 Large-conductance mechanosensitive channel, MscL LMES_RS02975 PF02687 LMES_RS02975 LMES_RS02980 PF00005 ABC transporter LMES_RS02985 PF12822 Protein of unknown function (DUF3816) LMES_RS02990 PF12822 Protein of unknown function (DUF3816) LMES_RS03000 PF00753 Metallo-beta-lactamase superfamily LMES_RS03000 PF07521 RNA-metabolising metallo-beta-lactamase LMES_RS03010 PF00009 Elongation factor Tu GTP binding domain LMES_RS03010 PF03143 Elongation factor Tu C-terminal domain LMES_RS03010 PF03144 Elongation factor Tu domain 2 LMES_RS03015 PF00005 ABC transporter LMES_RS03020 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LMES_RS03025 PF00582 Universal stress protein family LMES_RS03030 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LMES_RS03040 PF01569 PAP2 superfamily LMES_RS03045 PF00133 tRNA synthetases class I (I, L, M and V) LMES_RS03045 PF08264 Anticodon-binding domain of tRNA LMES_RS03045 PF09334 tRNA synthetases class I (M) LMES_RS03045 PF13603 Leucyl-tRNA synthetase, Domain 2 LMES_RS03050 PF01943 LMES_RS03050 LMES_RS03050 PF14667 Polysaccharide biosynthesis C-terminal domain LMES_RS03065 PF04011 LemA family LMES_RS03070 PF01435 Peptidase family M48 LMES_RS03075 PF02588 LMES_RS03075 LMES_RS03075 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LMES_RS03080 PF01361 Tautomerase enzyme LMES_RS03085 PF00877 NlpC/P60 family LMES_RS03085 PF01476 LysM domain LMES_RS03090 PF05532 CsbD-like LMES_RS03100 PF00478 IMP dehydrogenase / GMP reductase domain LMES_RS03105 PF00478 IMP dehydrogenase / GMP reductase domain LMES_RS03110 PF00117 Glutamine amidotransferase class-I LMES_RS03110 PF00958 GMP synthase C terminal domain LMES_RS03110 PF02540 NAD synthase LMES_RS03120 PF05532 CsbD-like LMES_RS03125 PF03838 Recombination protein U LMES_RS03130 PF00905 Penicillin binding protein transpeptidase domain LMES_RS03130 PF00912 Transglycosylase LMES_RS03135 PF06908 Protein of unknown function (DUF1273) LMES_RS03140 PF05103 DivIVA protein LMES_RS03145 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMES_RS03145 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS03150 PF10282 Lactonase, 7-bladed beta-propeller LMES_RS03155 PF01594 LMES_RS03155 LMES_RS03160 PF00588 SpoU rRNA Methylase family LMES_RS03170 PF01580 FtsK/SpoIIIE family LMES_RS03170 PF09397 Ftsk gamma domain LMES_RS03170 PF13491 LMES_RS03170 LMES_RS03175 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LMES_RS03175 PF02824 TGS domain LMES_RS03175 PF03129 Anticodon binding domain LMES_RS03175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain LMES_RS03180 PF00324 Amino acid permease LMES_RS03185 PF09335 LMES_RS03185 LMES_RS03195 PF03881 Fructosamine kinase LMES_RS03200 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain LMES_RS03200 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain LMES_RS03205 PF00132 Bacterial transferase hexapeptide (six repeats) LMES_RS03205 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal LMES_RS03205 PF14602 Hexapeptide repeat of succinyl-transferase LMES_RS03210 PF01546 Peptidase family M20/M25/M40 LMES_RS03210 PF07687 Peptidase dimerisation domain LMES_RS03215 PF00701 Dihydrodipicolinate synthetase family LMES_RS03220 PF01113 Dihydrodipicolinate reductase, N-terminus LMES_RS03220 PF05173 Dihydrodipicolinate reductase, C-terminus LMES_RS03225 PF02631 RecX family LMES_RS03230 PF04167 Protein of unknown function (DUF402) LMES_RS03235 PF01694 Rhomboid family LMES_RS03240 PF06014 Bacterial protein of unknown function (DUF910) LMES_RS03245 PF00480 ROK family LMES_RS03250 PF13743 Thioredoxin LMES_RS03255 PF04607 Region found in RelA / SpoT proteins LMES_RS03260 PF01513 ATP-NAD kinase LMES_RS03265 PF00849 RNA pseudouridylate synthase LMES_RS03270 PF00571 CBS domain LMES_RS03270 PF01769 Divalent cation transporter LMES_RS03270 PF03448 MgtE intracellular N domain LMES_RS03280 PF01979 Amidohydrolase family LMES_RS03280 PF13382 Adenine deaminase C-terminal domain LMES_RS03285 PF01380 SIS domain LMES_RS03285 PF13522 Glutamine amidotransferase domain LMES_RS03290 PF01255 Putative undecaprenyl diphosphate synthase LMES_RS03295 PF01148 Cytidylyltransferase family LMES_RS03300 PF02163 Peptidase family M50 LMES_RS03300 PF13180 PDZ domain LMES_RS03305 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) LMES_RS03305 PF03129 Anticodon binding domain LMES_RS03305 PF04073 Aminoacyl-tRNA editing domain LMES_RS03310 PF00929 Exonuclease LMES_RS03310 PF02811 PHP domain LMES_RS03310 PF07733 Bacterial DNA polymerase III alpha subunit LMES_RS03310 PF11490 LMES_RS03310 LMES_RS03310 PF14480 LMES_RS03310 LMES_RS03310 PF14579 Helix-hairpin-helix motif LMES_RS03315 PF06146 LMES_RS03315 LMES_RS03320 PF00294 pfkB family carbohydrate kinase LMES_RS03325 PF01189 NOL1/NOP2/sun family LMES_RS03325 PF13636 pre-rRNA processing and ribosome biogenesis LMES_RS03325 PF17125 LMES_RS03325 LMES_RS03325 PF17126 LMES_RS03325 LMES_RS03330 PF02608 Basic membrane protein LMES_RS03335 PF08866 Putative amino acid metabolism LMES_RS03340 PF00300 Histidine phosphatase superfamily (branch 1) LMES_RS03345 PF13538 UvrD-like helicase C-terminal domain LMES_RS03345 PF13604 AAA domain LMES_RS03345 PF14490 Helix-hairpin-helix containing domain LMES_RS03350 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LMES_RS03350 PF14572 Phosphoribosyl synthetase-associated domain LMES_RS03355 PF13472 GDSL-like Lipase/Acylhydrolase family LMES_RS03360 PF00248 Aldo/keto reductase family LMES_RS03365 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LMES_RS03365 PF02843 Phosphoribosylglycinamide synthetase, C domain LMES_RS03365 PF02844 Phosphoribosylglycinamide synthetase, N domain LMES_RS03370 PF01268 Formate--tetrahydrofolate ligase LMES_RS03375 PF01545 Cation efflux family LMES_RS03375 PF16916 LMES_RS03375 LMES_RS03380 PF00313 'Cold-shock' DNA-binding domain LMES_RS03385 PF00293 NUDIX domain LMES_RS03395 PF01048 Phosphorylase superfamily LMES_RS03400 PF01588 Putative tRNA binding domain LMES_RS03400 PF14794 Domain of unknown function (DUF4479) LMES_RS03405 PF01225 Mur ligase family, catalytic domain LMES_RS03405 PF02875 Mur ligase family, glutamate ligase domain LMES_RS03405 PF08245 Mur ligase middle domain LMES_RS03410 PF01027 Inhibitor of apoptosis-promoting Bax1 LMES_RS03415 PF06486 Protein of unknown function (DUF1093) LMES_RS03420 PF00251 Glycosyl hydrolases family 32 N-terminal domain LMES_RS03425 PF00476 DNA polymerase family A LMES_RS03425 PF01367 5'-3' exonuclease, C-terminal SAM fold LMES_RS03425 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain LMES_RS03430 PF04203 Sortase family LMES_RS03435 PF01935 Domain of unknown function DUF87 LMES_RS03440 PF13411 MerR HTH family regulatory protein LMES_RS03445 PF00120 Glutamine synthetase, catalytic domain LMES_RS03445 PF03951 Glutamine synthetase, beta-Grasp domain LMES_RS03450 PF00731 AIR carboxylase LMES_RS03455 PF02222 ATP-grasp domain LMES_RS03460 PF01259 SAICAR synthetase LMES_RS03465 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase LMES_RS03470 PF13507 CobB/CobQ-like glutamine amidotransferase domain LMES_RS03475 PF00586 AIR synthase related protein, N-terminal domain LMES_RS03475 PF02769 AIR synthase related protein, C-terminal domain LMES_RS03480 PF13537 Glutamine amidotransferase domain LMES_RS03485 PF00586 AIR synthase related protein, N-terminal domain LMES_RS03485 PF02769 AIR synthase related protein, C-terminal domain LMES_RS03490 PF00551 Formyl transferase LMES_RS03495 PF01808 AICARFT/IMPCHase bienzyme LMES_RS03495 PF02142 MGS-like domain LMES_RS03500 PF00149 Calcineurin-like phosphoesterase LMES_RS03505 PF13514 AAA domain LMES_RS03510 PF01966 HD domain LMES_RS03515 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase LMES_RS03520 PF08245 Mur ligase middle domain LMES_RS03525 PF01207 Dihydrouridine synthase (Dus) LMES_RS03530 PF02875 Mur ligase family, glutamate ligase domain LMES_RS03530 PF08245 Mur ligase middle domain LMES_RS03535 PF03099 Biotin/lipoate A/B protein ligase family LMES_RS03535 PF10437 Bacterial lipoate protein ligase C-terminus LMES_RS03540 PF00676 Dehydrogenase E1 component LMES_RS03545 PF02779 Transketolase, pyrimidine binding domain LMES_RS03545 PF02780 Transketolase, C-terminal domain LMES_RS03550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) LMES_RS03550 PF00364 Biotin-requiring enzyme LMES_RS03550 PF02817 e3 binding domain LMES_RS03555 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LMES_RS03555 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMES_RS03560 PF12697 Alpha/beta hydrolase family LMES_RS03565 PF03009 Glycerophosphoryl diester phosphodiesterase family LMES_RS03570 PF13930 DNA/RNA non-specific endonuclease LMES_RS03580 PF03729 LMES_RS03580 LMES_RS03585 PF01131 DNA topoisomerase LMES_RS03585 PF01396 LMES_RS03585 LMES_RS03585 PF01751 Toprim domain LMES_RS03590 PF02588 LMES_RS03590 LMES_RS03590 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LMES_RS03595 PF12685 SpoIIIAH-like protein LMES_RS03600 PF08543 Phosphomethylpyrimidine kinase LMES_RS03605 PF00425 chorismate binding enzyme LMES_RS03610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LMES_RS03610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LMES_RS03610 PF16582 LMES_RS03610 LMES_RS03615 PF00561 alpha/beta hydrolase fold LMES_RS03620 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain LMES_RS03620 PF13378 Enolase C-terminal domain-like LMES_RS03625 PF13181 Tetratricopeptide repeat LMES_RS03625 PF13432 Tetratricopeptide repeat LMES_RS03625 PF14559 Tetratricopeptide repeat LMES_RS03630 PF01743 Poly A polymerase head domain LMES_RS03630 PF12627 Probable RNA and SrmB- binding site of polymerase A LMES_RS03630 PF13735 tRNA nucleotidyltransferase domain 2 putative LMES_RS03635 PF00186 Dihydrofolate reductase LMES_RS03640 PF02645 Uncharacterised protein, DegV family COG1307 LMES_RS03645 PF01156 Inosine-uridine preferring nucleoside hydrolase LMES_RS03650 PF12822 Protein of unknown function (DUF3816) LMES_RS03655 PF13472 GDSL-like Lipase/Acylhydrolase family LMES_RS03660 PF09911 LMES_RS03660 LMES_RS03665 PF06855 Protein of unknown function (DUF1250) LMES_RS03670 PF01926 50S ribosome-binding GTPase LMES_RS03675 PF01351 Ribonuclease HII LMES_RS03680 PF02361 Cobalt transport protein LMES_RS03685 PF00005 ABC transporter LMES_RS03690 PF01910 Domain of unknown function DUF77 LMES_RS03695 PF09819 LMES_RS03695 LMES_RS03700 PF04816 Family of unknown function (DUF633) LMES_RS03705 PF01784 NIF3 (NGG1p interacting factor 3) LMES_RS03710 PF01546 Peptidase family M20/M25/M40 LMES_RS03710 PF07687 Peptidase dimerisation domain LMES_RS03715 PF11151 LMES_RS03715 LMES_RS03720 PF01336 OB-fold nucleic acid binding domain LMES_RS03720 PF02811 PHP domain LMES_RS03720 PF07733 Bacterial DNA polymerase III alpha subunit LMES_RS03720 PF14579 Helix-hairpin-helix motif LMES_RS03725 PF00224 Pyruvate kinase, barrel domain LMES_RS03725 PF02887 Pyruvate kinase, alpha/beta domain LMES_RS03730 PF00909 Ammonium Transporter Family LMES_RS03735 PF02562 PhoH-like protein LMES_RS03740 PF02130 Uncharacterized protein family UPF0054 LMES_RS03745 PF01219 Prokaryotic diacylglycerol kinase LMES_RS03750 PF01926 50S ribosome-binding GTPase LMES_RS03750 PF07650 KH domain LMES_RS03755 PF02565 Recombination protein O C terminal LMES_RS03755 PF11967 Recombination protein O N terminal LMES_RS03760 PF00710 Asparaginase LMES_RS03765 PF00300 Histidine phosphatase superfamily (branch 1) LMES_RS03770 PF00696 Amino acid kinase family LMES_RS03775 PF00288 GHMP kinases N terminal domain LMES_RS03775 PF08544 GHMP kinases C terminal LMES_RS03780 PF00742 Homoserine dehydrogenase LMES_RS03780 PF03447 Homoserine dehydrogenase, NAD binding domain LMES_RS03785 PF00291 Pyridoxal-phosphate dependent enzyme LMES_RS03785 PF14821 Threonine synthase N terminus LMES_RS03790 PF00464 Serine hydroxymethyltransferase LMES_RS03795 PF01812 5-formyltetrahydrofolate cyclo-ligase family LMES_RS03800 PF02353 Mycolic acid cyclopropane synthetase LMES_RS03805 PF00248 Aldo/keto reductase family LMES_RS03810 PF04657 LMES_RS03810 LMES_RS03815 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) LMES_RS03820 PF00294 pfkB family carbohydrate kinase LMES_RS03825 PF00356 Bacterial regulatory proteins, lacI family LMES_RS03825 PF13377 Periplasmic binding protein-like domain LMES_RS03830 PF01773 Na+ dependent nucleoside transporter N-terminus LMES_RS03830 PF07662 Na+ dependent nucleoside transporter C-terminus LMES_RS03835 PF01156 Inosine-uridine preferring nucleoside hydrolase LMES_RS03840 PF01156 Inosine-uridine preferring nucleoside hydrolase LMES_RS03845 PF00654 Voltage gated chloride channel LMES_RS03850 PF00571 CBS domain LMES_RS03850 PF01380 SIS domain LMES_RS03855 PF00793 DAHP synthetase I family LMES_RS03860 PF01475 Ferric uptake regulator family LMES_RS03870 PF00005 ABC transporter LMES_RS03875 PF00950 LMES_RS03875 LMES_RS03880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LMES_RS03880 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMES_RS03895 PF00962 Adenosine/AMP deaminase LMES_RS03900 PF00875 DNA photolyase LMES_RS03900 PF03441 FAD binding domain of DNA photolyase LMES_RS03905 PF02687 LMES_RS03905 LMES_RS03910 PF00005 ABC transporter LMES_RS03915 PF00440 Bacterial regulatory proteins, tetR family LMES_RS03915 PF14278 LMES_RS03915 LMES_RS03920 PF03176 MMPL family LMES_RS03925 PF00582 Universal stress protein family LMES_RS03930 PF08000 Bacterial PH domain LMES_RS03935 PF00310 Glutamine amidotransferases class-II LMES_RS03935 PF01493 GXGXG motif LMES_RS03935 PF01645 Conserved region in glutamate synthase LMES_RS03935 PF04898 Glutamate synthase central domain LMES_RS03940 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMES_RS03940 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster LMES_RS03945 PF01545 Cation efflux family LMES_RS03950 PF02274 Amidinotransferase LMES_RS03955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LMES_RS03955 PF01872 RibD C-terminal domain LMES_RS03960 PF00677 Lumazine binding domain LMES_RS03965 PF00925 GTP cyclohydrolase II LMES_RS03965 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase LMES_RS03970 PF00885 6,7-dimethyl-8-ribityllumazine synthase LMES_RS03975 PF00122 E1-E2 ATPase LMES_RS03975 PF00689 Cation transporting ATPase, C-terminus LMES_RS03975 PF00690 Cation transporter/ATPase, N-terminus LMES_RS03975 PF00702 haloacid dehalogenase-like hydrolase LMES_RS03980 PF07690 Major Facilitator Superfamily LMES_RS03985 PF00128 Alpha amylase, catalytic domain LMES_RS03985 PF16657 LMES_RS03985 LMES_RS03990 PF00356 Bacterial regulatory proteins, lacI family LMES_RS03990 PF13377 Periplasmic binding protein-like domain LMES_RS04010 PF01965 DJ-1/PfpI family LMES_RS04015 PF00072 Response regulator receiver domain LMES_RS04015 PF00486 Transcriptional regulatory protein, C terminal LMES_RS04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMES_RS04025 PF00005 ABC transporter LMES_RS04030 PF02687 LMES_RS04030 LMES_RS04035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMES_RS04035 PF03466 LysR substrate binding domain LMES_RS04040 PF00202 Aminotransferase class-III LMES_RS04045 PF00132 Bacterial transferase hexapeptide (six repeats) LMES_RS04050 PF13302 Acetyltransferase (GNAT) domain LMES_RS04055 PF00248 Aldo/keto reductase family LMES_RS04060 PF00293 NUDIX domain LMES_RS04065 PF02311 AraC-like ligand binding domain LMES_RS04065 PF12833 Helix-turn-helix domain LMES_RS04070 PF02449 Beta-galactosidase LMES_RS04070 PF08532 Beta-galactosidase trimerisation domain LMES_RS04070 PF08533 Beta-galactosidase C-terminal domain LMES_RS04075 PF07690 Major Facilitator Superfamily LMES_RS04085 PF04616 Glycosyl hydrolases family 43 LMES_RS04095 PF05437 LMES_RS04095 LMES_RS04100 PF13411 MerR HTH family regulatory protein LMES_RS04105 PF02517 CAAX protease self-immunity LMES_RS04110 PF03403 Platelet-activating factor acetylhydrolase, isoform II LMES_RS04115 PF00392 Bacterial regulatory proteins, gntR family LMES_RS04115 PF13377 Periplasmic binding protein-like domain LMES_RS04120 PF02610 L-arabinose isomerase LMES_RS04120 PF11762 L-arabinose isomerase C-terminal domain LMES_RS04125 PF00083 Sugar (and other) transporter LMES_RS04130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain LMES_RS04130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain LMES_RS04135 PF00596 Class II Aldolase and Adducin N-terminal domain LMES_RS04140 PF13561 Enoyl-(Acyl carrier protein) reductase LMES_RS04150 PF04226 LMES_RS04150 LMES_RS04160 PF10031 LMES_RS04160 LMES_RS04165 PF03780 LMES_RS04165 LMES_RS04170 PF07077 LMES_RS04170 LMES_RS04175 PF04226 LMES_RS04175 LMES_RS04180 PF00248 Aldo/keto reductase family LMES_RS04185 PF00083 Sugar (and other) transporter LMES_RS04190 PF04230 LMES_RS04190 LMES_RS04195 PF00933 Glycosyl hydrolase family 3 N terminal domain LMES_RS04195 PF01915 Glycosyl hydrolase family 3 C-terminal domain LMES_RS04195 PF14310 Fibronectin type III-like domain LMES_RS04200 PF03358 NADPH-dependent FMN reductase LMES_RS04205 PF05128 LMES_RS04205 LMES_RS04210 PF02517 CAAX protease self-immunity LMES_RS04215 PF13563 2'-5' RNA ligase superfamily LMES_RS04220 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LMES_RS04220 PF13347 MFS/sugar transport protein LMES_RS04225 PF00356 Bacterial regulatory proteins, lacI family LMES_RS04225 PF13377 Periplasmic binding protein-like domain LMES_RS04230 PF02065 Melibiase LMES_RS04230 PF16874 LMES_RS04230 LMES_RS04230 PF16875 LMES_RS04230 LMES_RS04235 PF00288 GHMP kinases N terminal domain LMES_RS04235 PF08544 GHMP kinases C terminal LMES_RS04235 PF10509 Galactokinase galactose-binding signature LMES_RS04245 PF00005 ABC transporter LMES_RS04260 PF03551 Transcriptional regulator PadR-like family LMES_RS04270 PF00356 Bacterial regulatory proteins, lacI family LMES_RS04270 PF13377 Periplasmic binding protein-like domain LMES_RS04275 PF07690 Major Facilitator Superfamily LMES_RS04280 PF03632 Glycosyl hydrolase family 65 central catalytic domain LMES_RS04280 PF03633 Glycosyl hydrolase family 65, C-terminal domain LMES_RS04280 PF03636 Glycosyl hydrolase family 65, N-terminal domain LMES_RS04285 PF13419 Haloacid dehalogenase-like hydrolase LMES_RS04290 PF00356 Bacterial regulatory proteins, lacI family LMES_RS04290 PF13377 Periplasmic binding protein-like domain LMES_RS04295 PF00128 Alpha amylase, catalytic domain LMES_RS04295 PF11941 Domain of unknown function (DUF3459) LMES_RS04300 PF07690 Major Facilitator Superfamily LMES_RS04305 PF00128 Alpha amylase, catalytic domain LMES_RS04305 PF11941 Domain of unknown function (DUF3459) LMES_RS04310 PF00874 PRD domain LMES_RS04310 PF03123 CAT RNA binding domain LMES_RS04315 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LMES_RS04315 PF00367 phosphotransferase system, EIIB LMES_RS04315 PF02378 Phosphotransferase system, EIIC LMES_RS04320 PF00232 Glycosyl hydrolase family 1 LMES_RS04325 PF13302 Acetyltransferase (GNAT) domain LMES_RS04330 PF13185 GAF domain LMES_RS04335 PF01943 LMES_RS04335 LMES_RS04335 PF14667 Polysaccharide biosynthesis C-terminal domain LMES_RS04340 PF00356 Bacterial regulatory proteins, lacI family LMES_RS04340 PF13377 Periplasmic binding protein-like domain LMES_RS04350 PF13347 MFS/sugar transport protein LMES_RS04355 PF00128 Alpha amylase, catalytic domain LMES_RS04355 PF11941 Domain of unknown function (DUF3459) LMES_RS04365 PF09721 LMES_RS04365 LMES_RS04370 PF00535 Glycosyl transferase family 2 LMES_RS04375 PF01242 6-pyruvoyl tetrahydropterin synthase LMES_RS04385 PF00106 short chain dehydrogenase LMES_RS04390 PF00293 NUDIX domain LMES_RS04395 PF07690 Major Facilitator Superfamily LMES_RS04400 PF00107 Zinc-binding dehydrogenase LMES_RS04400 PF08240 Alcohol dehydrogenase GroES-like domain LMES_RS04410 PF00005 ABC transporter LMES_RS04415 PF03167 Uracil DNA glycosylase superfamily LMES_RS04420 PF07155 ECF-type riboflavin transporter, S component LMES_RS04425 PF08282 haloacid dehalogenase-like hydrolase LMES_RS04430 PF07690 Major Facilitator Superfamily LMES_RS04435 PF01965 DJ-1/PfpI family LMES_RS04440 PF01243 Pyridoxamine 5'-phosphate oxidase LMES_RS04445 PF00155 Aminotransferase class I and II LMES_RS04450 PF13561 Enoyl-(Acyl carrier protein) reductase LMES_RS04455 PF02447 LMES_RS04455 LMES_RS04460 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain LMES_RS04460 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LMES_RS04465 PF02016 LD-carboxypeptidase LMES_RS04470 PF13302 Acetyltransferase (GNAT) domain LMES_RS04475 PF00232 Glycosyl hydrolase family 1 LMES_RS04480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LMES_RS04485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LMES_RS04485 PF00874 PRD domain LMES_RS04485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LMES_RS04485 PF05043 Mga helix-turn-helix domain LMES_RS04485 PF08279 HTH domain LMES_RS04490 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LMES_RS04500 PF02378 Phosphotransferase system, EIIC LMES_RS04505 PF00860 Permease family LMES_RS04510 PF04443 LMES_RS04510 LMES_RS04515 PF05893 Acyl-CoA reductase (LuxC) LMES_RS04520 PF13561 Enoyl-(Acyl carrier protein) reductase LMES_RS04525 PF09512 LMES_RS04525 LMES_RS04530 PF02110 Hydroxyethylthiazole kinase family LMES_RS04535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LMES_RS04540 PF02378 Phosphotransferase system, EIIC LMES_RS04545 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit LMES_RS04550 PF00232 Glycosyl hydrolase family 1 LMES_RS04555 PF16935 LMES_RS04555 LMES_RS04560 PF03807 NADP oxidoreductase coenzyme F420-dependent LMES_RS04565 PF01638 HxlR-like helix-turn-helix LMES_RS04570 PF01047 MarR family LMES_RS04575 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain LMES_RS04575 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMES_RS04580 PF08240 Alcohol dehydrogenase GroES-like domain LMES_RS04580 PF13602 Zinc-binding dehydrogenase LMES_RS04585 PF06993 LMES_RS04585 LMES_RS04590 PF01501 Glycosyl transferase family 8 LMES_RS04595 PF00005 ABC transporter LMES_RS04600 PF00950 LMES_RS04600 LMES_RS04605 PF01297 Periplasmic solute binding protein family LMES_RS04610 PF03306 Alpha-acetolactate decarboxylase LMES_RS04620 PF00072 Response regulator receiver domain LMES_RS04620 PF00486 Transcriptional regulatory protein, C terminal LMES_RS04625 PF00512 His Kinase A (phospho-acceptor) domain LMES_RS04625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMES_RS04640 PF03413 Peptidase propeptide and YPEB domain LMES_RS04645 PF03816 Cell envelope-related transcriptional attenuator domain LMES_RS04650 PF12802 MarR family LMES_RS04655 PF07690 Major Facilitator Superfamily LMES_RS04660 PF00122 E1-E2 ATPase LMES_RS04660 PF00689 Cation transporting ATPase, C-terminus LMES_RS04660 PF00690 Cation transporter/ATPase, N-terminus LMES_RS04660 PF00702 haloacid dehalogenase-like hydrolase LMES_RS04670 PF00248 Aldo/keto reductase family LMES_RS04675 PF13411 MerR HTH family regulatory protein LMES_RS04680 PF04073 Aminoacyl-tRNA editing domain LMES_RS04685 PF01810 LMES_RS04685 LMES_RS04690 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMES_RS04690 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMES_RS04695 PF00106 short chain dehydrogenase LMES_RS04705 PF03388 Legume-like lectin family LMES_RS04705 PF06458 MucBP domain LMES_RS04710 PF01757 LMES_RS04710 LMES_RS04715 PF13641 Glycosyltransferase like family 2 LMES_RS04725 PF01522 Polysaccharide deacetylase LMES_RS04745 PF02588 LMES_RS04745 LMES_RS04750 PF00817 impB/mucB/samB family LMES_RS04750 PF11798 IMS family HHH motif LMES_RS04750 PF11799 impB/mucB/samB family C-terminal domain LMES_RS04765 PF00205 Thiamine pyrophosphate enzyme, central domain LMES_RS04765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LMES_RS04765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LMES_RS04770 PF00011 Hsp20/alpha crystallin family LMES_RS04775 PF13460 NADH(P)-binding LMES_RS04780 PF07301 LMES_RS04780 LMES_RS04785 PF01546 Peptidase family M20/M25/M40 LMES_RS04785 PF07687 Peptidase dimerisation domain LMES_RS04790 PF03070 TENA/THI-4/PQQC family LMES_RS04800 PF03575 Peptidase family S51 LMES_RS04805 PF13673 Acetyltransferase (GNAT) domain LMES_RS04810 PF02567 Phenazine biosynthesis-like protein LMES_RS04815 PF12697 Alpha/beta hydrolase family LMES_RS04820 PF13091 PLD-like domain LMES_RS04820 PF13396 LMES_RS04820 LMES_RS04830 PF01047 MarR family LMES_RS04840 PF00665 Integrase core domain LMES_RS04840 PF13936 Helix-turn-helix domain LMES_RS04845 PF12844 Helix-turn-helix domain LMES_RS04855 PF06821 Serine hydrolase LMES_RS04865 PF01381 Helix-turn-helix LMES_RS04870 PF11683 LMES_RS04870 LMES_RS04885 PF13673 Acetyltransferase (GNAT) domain LMES_RS04895 PF02517 CAAX protease self-immunity LMES_RS04915 PF07690 Major Facilitator Superfamily LMES_RS04935 PF01047 MarR family LMES_RS04940 PF02698 DUF218 domain LMES_RS04955 PF01420 Type I restriction modification DNA specificity domain LMES_RS04960 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LMES_RS04965 PF02517 CAAX protease self-immunity LMES_RS04975 PF13242 HAD-hyrolase-like LMES_RS04980 PF04266 ASCH domain LMES_RS04985 PF03596 LMES_RS04985 LMES_RS04990 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region LMES_RS04995 PF01230 HIT domain LMES_RS05000 PF09391 Protein of unknown function (DUF2000) LMES_RS05005 PF02311 AraC-like ligand binding domain LMES_RS05005 PF12833 Helix-turn-helix domain LMES_RS05010 PF00072 Response regulator receiver domain LMES_RS05010 PF00196 Bacterial regulatory proteins, luxR family LMES_RS05015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMES_RS05015 PF07730 Histidine kinase LMES_RS05020 PF03176 MMPL family LMES_RS05025 PF00583 Acetyltransferase (GNAT) family LMES_RS05030 PF01565 FAD binding domain LMES_RS05035 PF07690 Major Facilitator Superfamily LMES_RS05040 PF12833 Helix-turn-helix domain LMES_RS05045 PF13561 Enoyl-(Acyl carrier protein) reductase LMES_RS05050 PF01546 Peptidase family M20/M25/M40 LMES_RS05050 PF07687 Peptidase dimerisation domain LMES_RS05055 PF07690 Major Facilitator Superfamily LMES_RS05060 PF05690 Thiazole biosynthesis protein ThiG LMES_RS05065 PF00899 ThiF family LMES_RS05070 PF02597 ThiS family LMES_RS05075 PF02581 Thiamine monophosphate synthase/TENI LMES_RS05080 PF01487 Type I 3-dehydroquinase LMES_RS05090 PF01202 Shikimate kinase LMES_RS05090 PF01817 Chorismate mutase type II LMES_RS05095 PF02153 Prephenate dehydrogenase LMES_RS05100 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) LMES_RS05105 PF01264 Chorismate synthase LMES_RS05110 PF01761 3-dehydroquinate synthase LMES_RS05115 PF00793 DAHP synthetase I family LMES_RS05120 PF08501 Shikimate dehydrogenase substrate binding domain LMES_RS05125 PF00456 Transketolase, thiamine diphosphate binding domain LMES_RS05125 PF02779 Transketolase, pyrimidine binding domain LMES_RS05130 PF00117 Glutamine amidotransferase class-I LMES_RS05135 PF00425 chorismate binding enzyme LMES_RS05135 PF04715 Anthranilate synthase component I, N terminal region LMES_RS05140 PF00290 Tryptophan synthase alpha chain LMES_RS05145 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase LMES_RS05150 PF00218 Indole-3-glycerol phosphate synthase LMES_RS05155 PF00591 Glycosyl transferase family, a/b domain LMES_RS05155 PF02885 Glycosyl transferase family, helical bundle domain LMES_RS05160 PF00291 Pyridoxal-phosphate dependent enzyme LMES_RS05165 PF01263 Aldose 1-epimerase LMES_RS05170 PF00589 Phage integrase family LMES_RS05170 PF02899 Phage integrase, N-terminal SAM-like domain LMES_RS05180 PF05167 Uncharacterised ACR (DUF711) LMES_RS05185 PF13740 ACT domain LMES_RS05190 PF05014 Nucleoside 2-deoxyribosyltransferase LMES_RS05200 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal LMES_RS05200 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal LMES_RS05205 PF00005 ABC transporter LMES_RS05205 PF12848 ABC transporter LMES_RS05215 PF04452 RNA methyltransferase LMES_RS05220 PF06325 Ribosomal protein L11 methyltransferase (PrmA) LMES_RS05225 PF08240 Alcohol dehydrogenase GroES-like domain LMES_RS05225 PF13602 Zinc-binding dehydrogenase LMES_RS05235 PF00009 Elongation factor Tu GTP binding domain LMES_RS05235 PF00679 Elongation factor G C-terminus LMES_RS05235 PF03144 Elongation factor Tu domain 2 LMES_RS05235 PF06421 GTP-binding protein LepA C-terminus LMES_RS05240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold LMES_RS05240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain LMES_RS05245 PF02092 LMES_RS05245 LMES_RS05250 PF02091 Glycyl-tRNA synthetase alpha subunit LMES_RS05255 PF05656 LMES_RS05255 LMES_RS05260 PF01765 Ribosome recycling factor LMES_RS05265 PF00696 Amino acid kinase family LMES_RS05270 PF00889 Elongation factor TS LMES_RS05275 PF00318 Ribosomal protein S2 LMES_RS05280 PF01541 GIY-YIG catalytic domain LMES_RS05285 PF05175 Methyltransferase small domain LMES_RS05290 PF01553 Acyltransferase LMES_RS05295 PF03672 LMES_RS05295 LMES_RS05300 PF00717 Peptidase S24-like LMES_RS05300 PF01726 LexA DNA binding domain LMES_RS05305 PF00156 Phosphoribosyl transferase domain LMES_RS05310 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LMES_RS05315 PF02142 MGS-like domain LMES_RS05315 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LMES_RS05315 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LMES_RS05320 PF00117 Glutamine amidotransferase class-I LMES_RS05320 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LMES_RS05325 PF01979 Amidohydrolase family LMES_RS05330 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LMES_RS05330 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LMES_RS05335 PF00717 Peptidase S24-like LMES_RS05335 PF10502 Signal peptidase, peptidase S26 LMES_RS05340 PF06133 Protein of unknown function (DUF964) LMES_RS05345 PF00905 Penicillin binding protein transpeptidase domain LMES_RS05345 PF00912 Transglycosylase LMES_RS05350 PF01316 Arginine repressor, DNA binding domain LMES_RS05350 PF02863 Arginine repressor, C-terminal domain LMES_RS05355 PF00750 tRNA synthetases class I (R) LMES_RS05355 PF03485 Arginyl tRNA synthetase N terminal domain LMES_RS05355 PF05746 DALR anticodon binding domain LMES_RS05365 PF02441 Flavoprotein LMES_RS05365 PF04127 DNA / pantothenate metabolism flavoprotein LMES_RS05370 PF04525 Tubby C 2 LMES_RS05375 PF01145 SPFH domain / Band 7 family LMES_RS05380 PF05534 LMES_RS05380 LMES_RS05385 PF05532 CsbD-like LMES_RS05400 PF02390 Putative methyltransferase LMES_RS05405 PF05975 LMES_RS05405 LMES_RS05410 PF00005 ABC transporter LMES_RS05415 PF01230 HIT domain LMES_RS05425 PF13145 PPIC-type PPIASE domain LMES_RS05430 PF07690 Major Facilitator Superfamily LMES_RS05435 PF00155 Aminotransferase class I and II LMES_RS05440 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMES_RS05440 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMES_RS05445 PF00005 ABC transporter LMES_RS05450 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS05455 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMES_RS05460 PF01053 Cys/Met metabolism PLP-dependent enzyme LMES_RS05465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMES_RS05470 PF13561 Enoyl-(Acyl carrier protein) reductase LMES_RS05475 PF06177 LMES_RS05475 LMES_RS05480 PF00140 Sigma-70 factor, region 1 LMES_RS05480 PF03979 Sigma-70 factor, region 1 LMES_RS05480 PF04539 Sigma-70 region 3 LMES_RS05480 PF04542 Sigma-70 region 2 LMES_RS05480 PF04545 Sigma-70, region 4 LMES_RS05485 PF01807 CHC2 zinc finger LMES_RS05485 PF08275 DNA primase catalytic core, N-terminal domain LMES_RS05485 PF10410 DnaB-helicase binding domain of primase LMES_RS05485 PF13155 Toprim-like LMES_RS05495 PF03613 LMES_RS05495 LMES_RS05500 PF03609 LMES_RS05500 LMES_RS05505 PF03830 PTS system sorbose subfamily IIB component LMES_RS05510 PF03610 PTS system fructose IIA component LMES_RS05515 PF00440 Bacterial regulatory proteins, tetR family LMES_RS05525 PF02481 DNA recombination-mediator protein A LMES_RS05530 PF00005 ABC transporter LMES_RS05530 PF12848 ABC transporter LMES_RS05530 PF16326 LMES_RS05530 LMES_RS05535 PF01180 Dihydroorotate dehydrogenase LMES_RS05540 PF00871 Acetokinase family LMES_RS05545 PF01520 N-acetylmuramoyl-L-alanine amidase LMES_RS05545 PF08239 Bacterial SH3 domain LMES_RS05555 PF00575 S1 RNA binding domain LMES_RS05555 PF09371 Tex-like protein N-terminal domain LMES_RS05555 PF12836 Helix-hairpin-helix motif LMES_RS05555 PF16921 LMES_RS05555 LMES_RS05560 PF00582 Universal stress protein family LMES_RS05565 PF01741 Large-conductance mechanosensitive channel, MscL LMES_RS05570 PF14262 Domain of unknown function (DUF4353) LMES_RS05575 PF00291 Pyridoxal-phosphate dependent enzyme LMES_RS05580 PF01053 Cys/Met metabolism PLP-dependent enzyme LMES_RS05585 PF00132 Bacterial transferase hexapeptide (six repeats) LMES_RS05595 PF00216 Bacterial DNA-binding protein LMES_RS05605 PF00575 S1 RNA binding domain LMES_RS05610 PF02224 Cytidylate kinase LMES_RS05620 PF12822 Protein of unknown function (DUF3816) LMES_RS05625 PF00849 RNA pseudouridylate synthase LMES_RS05625 PF01479 S4 domain LMES_RS05630 PF04079 Putative transcriptional regulators (Ypuh-like) LMES_RS05635 PF02616 ScpA/B protein LMES_RS05645 PF00589 Phage integrase family LMES_RS05645 PF02899 Phage integrase, N-terminal SAM-like domain LMES_RS05650 PF13509 S1 domain LMES_RS05655 PF09424 Yqey-like protein LMES_RS05660 PF01165 Ribosomal protein S21 LMES_RS05665 PF00083 Sugar (and other) transporter LMES_RS05670 PF07905 LMES_RS05670 LMES_RS05670 PF13556 PucR C-terminal helix-turn-helix domain LMES_RS05675 PF00324 Amino acid permease LMES_RS05680 PF02588 LMES_RS05680 LMES_RS05680 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) LMES_RS05685 PF00152 tRNA synthetases class II (D, K and N) LMES_RS05685 PF01336 OB-fold nucleic acid binding domain LMES_RS05685 PF02938 GAD domain LMES_RS05690 PF03129 Anticodon binding domain LMES_RS05690 PF13393 Histidyl-tRNA synthetase LMES_RS05695 PF01263 Aldose 1-epimerase LMES_RS05700 PF02311 AraC-like ligand binding domain LMES_RS05700 PF12833 Helix-turn-helix domain LMES_RS05705 PF00288 GHMP kinases N terminal domain LMES_RS05705 PF08544 GHMP kinases C terminal LMES_RS05705 PF10509 Galactokinase galactose-binding signature LMES_RS05710 PF13347 MFS/sugar transport protein LMES_RS05715 PF00248 Aldo/keto reductase family LMES_RS05725 PF06738 LMES_RS05725 LMES_RS05725 PF12821 LMES_RS05725 LMES_RS05730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMES_RS05730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMES_RS05735 PF01063 Aminotransferase class IV LMES_RS05745 PF06265 Protein of unknown function (DUF1027) LMES_RS05750 PF00149 Calcineurin-like phosphoesterase LMES_RS05750 PF02872 5'-nucleotidase, C-terminal domain LMES_RS05760 PF00557 Metallopeptidase family M24 LMES_RS05760 PF01321 Creatinase/Prolidase N-terminal domain LMES_RS05765 PF01016 Ribosomal L27 protein LMES_RS05770 PF00829 Ribosomal prokaryotic L21 protein LMES_RS05775 PF00440 Bacterial regulatory proteins, tetR family LMES_RS05780 PF03083 Sugar efflux transporter for intercellular exchange LMES_RS05800 PF13420 Acetyltransferase (GNAT) domain LMES_RS05805 PF00892 EamA-like transporter family LMES_RS05815 PF00893 Small Multidrug Resistance protein LMES_RS05830 PF00009 Elongation factor Tu GTP binding domain LMES_RS05830 PF00679 Elongation factor G C-terminus LMES_RS05830 PF03144 Elongation factor Tu domain 2 LMES_RS05835 PF00459 Inositol monophosphatase family LMES_RS05840 PF05256 Uncharacterised protein family (UPF0223) LMES_RS05845 PF01327 Polypeptide deformylase LMES_RS05850 PF00226 DnaJ domain LMES_RS05850 PF01556 DnaJ C terminal domain LMES_RS05855 PF00012 Hsp70 protein LMES_RS05860 PF01025 GrpE LMES_RS05865 PF01628 HrcA protein C terminal domain LMES_RS05865 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding LMES_RS05870 PF01687 Riboflavin kinase LMES_RS05870 PF06574 FAD synthetase LMES_RS05875 PF01509 TruB family pseudouridylate synthase (N terminal domain) LMES_RS05880 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 LMES_RS05885 PF00155 Aminotransferase class I and II LMES_RS05890 PF02033 Ribosome-binding factor A LMES_RS05895 PF00009 Elongation factor Tu GTP binding domain LMES_RS05895 PF04760 Translation initiation factor IF-2, N-terminal region LMES_RS05895 PF11987 Translation-initiation factor 2 LMES_RS05900 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family LMES_RS05905 PF04296 Protein of unknown function (DUF448) LMES_RS05910 PF08529 NusA N-terminal domain LMES_RS05910 PF13184 NusA-like KH domain LMES_RS05915 PF02576 Uncharacterised BCR, YhbC family COG0779 LMES_RS05920 PF00253 Ribosomal protein S14p/S29e LMES_RS05925 PF00471 Ribosomal protein L33 LMES_RS05930 PF01368 DHH family LMES_RS05930 PF02833 DHHA2 domain LMES_RS05935 PF00521 DNA gyrase/topoisomerase IV, subunit A LMES_RS05935 PF03989 DNA gyrase C-terminal domain, beta-propeller LMES_RS05940 PF00204 DNA gyrase B LMES_RS05940 PF00986 DNA gyrase B subunit, carboxyl terminus LMES_RS05940 PF01751 Toprim domain LMES_RS05940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMES_RS05945 PF02660 LMES_RS05945 LMES_RS05950 PF02580 D-Tyr-tRNA(Tyr) deacylase LMES_RS05955 PF02824 TGS domain LMES_RS05955 PF04607 Region found in RelA / SpoT proteins LMES_RS05955 PF13291 ACT domain LMES_RS05955 PF13328 HD domain LMES_RS05960 PF00083 Sugar (and other) transporter LMES_RS05960 PF07690 Major Facilitator Superfamily LMES_RS05970 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain LMES_RS05970 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain LMES_RS05975 PF00117 Glutamine amidotransferase class-I LMES_RS05975 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain LMES_RS05980 PF00156 Phosphoribosyl transferase domain LMES_RS05985 PF00849 RNA pseudouridylate synthase LMES_RS05985 PF01479 S4 domain LMES_RS05995 PF00075 RNase H LMES_RS06000 PF00583 Acetyltransferase (GNAT) family LMES_RS06005 PF00155 Aminotransferase class I and II LMES_RS06010 PF01170 Putative RNA methylase family UPF0020 LMES_RS06010 PF02926 THUMP domain LMES_RS06020 PF07261 Replication initiation and membrane attachment LMES_RS06025 PF00152 tRNA synthetases class II (D, K and N) LMES_RS06025 PF01336 OB-fold nucleic acid binding domain LMES_RS06030 PF00155 Aminotransferase class I and II LMES_RS06040 PF00929 Exonuclease LMES_RS06045 PF00288 GHMP kinases N terminal domain LMES_RS06045 PF08544 GHMP kinases C terminal LMES_RS06050 PF00288 GHMP kinases N terminal domain LMES_RS06050 PF08544 GHMP kinases C terminal LMES_RS06055 PF00288 GHMP kinases N terminal domain LMES_RS06055 PF08544 GHMP kinases C terminal LMES_RS06060 PF01070 FMN-dependent dehydrogenase LMES_RS06065 PF00156 Phosphoribosyl transferase domain LMES_RS06070 PF00206 Lyase LMES_RS06070 PF10397 Adenylosuccinate lyase C-terminus LMES_RS06075 PF01226 Formate/nitrite transporter LMES_RS06080 PF00230 Major intrinsic protein LMES_RS06085 PF00258 Flavodoxin LMES_RS06090 PF04138 LMES_RS06090 LMES_RS06095 PF00535 Glycosyl transferase family 2 LMES_RS06105 PF00884 Sulfatase LMES_RS06115 PF00535 Glycosyl transferase family 2 LMES_RS06120 PF03275 UDP-galactopyranose mutase LMES_RS06120 PF13450 NAD(P)-binding Rossmann-like domain LMES_RS06125 PF14393 LMES_RS06125 LMES_RS06130 PF04932 LMES_RS06130 LMES_RS06135 PF02706 Chain length determinant protein LMES_RS06140 PF02397 LMES_RS06140 LMES_RS06145 PF01943 LMES_RS06145 LMES_RS06145 PF14667 Polysaccharide biosynthesis C-terminal domain LMES_RS06150 PF13529 Peptidase_C39 like family LMES_RS06170 PF02324 Glycosyl hydrolase family 70 LMES_RS06180 PF01473 Putative cell wall binding repeat LMES_RS06180 PF02324 Glycosyl hydrolase family 70 LMES_RS06185 PF01757 LMES_RS06185 LMES_RS06190 PF01183 Glycosyl hydrolases family 25 LMES_RS06205 PF06030 LMES_RS06205 LMES_RS06205 PF11797 LMES_RS06205 LMES_RS06210 PF13731 LMES_RS06210 LMES_RS06225 PF04321 RmlD substrate binding domain LMES_RS06230 PF16363 LMES_RS06230 LMES_RS06235 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase LMES_RS06240 PF00483 Nucleotidyl transferase LMES_RS06245 PF00535 Glycosyl transferase family 2 LMES_RS06255 PF00534 Glycosyl transferases group 1 LMES_RS06265 PF00535 Glycosyl transferase family 2 LMES_RS06275 PF00534 Glycosyl transferases group 1 LMES_RS06275 PF13439 Glycosyltransferase Family 4 LMES_RS06285 PF02485 Core-2/I-Branching enzyme LMES_RS06290 PF00535 Glycosyl transferase family 2 LMES_RS06295 PF02397 LMES_RS06295 LMES_RS06300 PF13614 AAA domain LMES_RS06305 PF02706 Chain length determinant protein LMES_RS06315 PF00557 Metallopeptidase family M24 LMES_RS06320 PF03816 Cell envelope-related transcriptional attenuator domain LMES_RS06325 PF14681 Uracil phosphoribosyltransferase LMES_RS06330 PF05525 LMES_RS06330 LMES_RS06335 PF00453 Ribosomal protein L20 LMES_RS06340 PF01632 Ribosomal protein L35 LMES_RS06345 PF00707 Translation initiation factor IF-3, C-terminal domain LMES_RS06345 PF05198 Translation initiation factor IF-3, N-terminal domain LMES_RS06350 PF07099 LMES_RS06350 LMES_RS06360 PF01783 Ribosomal L32p protein family LMES_RS06365 PF03932 CutC family LMES_RS06370 PF01370 NAD dependent epimerase/dehydratase family LMES_RS06375 PF03083 Sugar efflux transporter for intercellular exchange LMES_RS06380 PF00578 AhpC/TSA family LMES_RS06380 PF10417 C-terminal domain of 1-Cys peroxiredoxin LMES_RS06385 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMES_RS06385 PF13192 Thioredoxin domain LMES_RS06390 PF05670 LMES_RS06390 LMES_RS06390 PF05833 Fibronectin-binding protein A N-terminus (FbpA) LMES_RS06395 PF13649 Methyltransferase domain LMES_RS06400 PF00303 Thymidylate synthase LMES_RS06405 PF05014 Nucleoside 2-deoxyribosyltransferase LMES_RS06410 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LMES_RS06410 PF09363 XFP C-terminal domain LMES_RS06410 PF09364 XFP N-terminal domain LMES_RS06415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain LMES_RS06415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain LMES_RS06420 PF00206 Lyase LMES_RS06420 PF14698 Argininosuccinate lyase C-terminal LMES_RS06425 PF00764 Arginosuccinate synthase LMES_RS06430 PF00709 Adenylosuccinate synthetase LMES_RS06435 PF01709 Transcriptional regulator LMES_RS06440 PF04608 Phosphatidylglycerophosphatase A LMES_RS06445 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMES_RS06445 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMES_RS06450 PF00266 Aminotransferase class-V LMES_RS06465 PF01515 Phosphate acetyl/butaryl transferase LMES_RS06470 PF03167 Uracil DNA glycosylase superfamily LMES_RS06480 PF13303 LMES_RS06480 LMES_RS06495 PF04018 LMES_RS06495 LMES_RS06500 PF00156 Phosphoribosyl transferase domain LMES_RS06505 PF01368 DHH family LMES_RS06505 PF02272 DHHA1 domain LMES_RS06505 PF10141 LMES_RS06505 LMES_RS06510 PF00753 Metallo-beta-lactamase superfamily LMES_RS06515 PF01625 Peptide methionine sulfoxide reductase LMES_RS06520 PF02558 Ketopantoate reductase PanE/ApbA LMES_RS06520 PF08546 Ketopantoate reductase PanE/ApbA C terminal LMES_RS06525 PF01746 tRNA (Guanine-1)-methyltransferase LMES_RS06530 PF01782 RimM N-terminal domain LMES_RS06530 PF05239 PRC-barrel domain LMES_RS06535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain LMES_RS06540 PF00580 UvrD/REP helicase N-terminal domain LMES_RS06540 PF12705 PD-(D/E)XK nuclease superfamily LMES_RS06540 PF13361 UvrD-like helicase C-terminal domain LMES_RS06545 PF04257 Exodeoxyribonuclease V, gamma subunit LMES_RS06545 PF12705 PD-(D/E)XK nuclease superfamily LMES_RS06550 PF00756 Putative esterase LMES_RS06560 PF00886 Ribosomal protein S16 LMES_RS06570 PF00133 tRNA synthetases class I (I, L, M and V) LMES_RS06570 PF08264 Anticodon-binding domain of tRNA LMES_RS06575 PF05103 DivIVA protein LMES_RS06580 PF01479 S4 domain LMES_RS06585 PF02325 LMES_RS06585 LMES_RS06590 PF04472 Protein of unknown function (DUF552) LMES_RS06595 PF00091 Tubulin/FtsZ family, GTPase domain LMES_RS06595 PF12327 FtsZ family, C-terminal domain LMES_RS06600 PF02491 SHS2 domain inserted in FTSA LMES_RS06600 PF14450 Cell division protein FtsA LMES_RS06605 PF03799 Cell division protein FtsQ LMES_RS06610 PF03033 Glycosyltransferase family 28 N-terminal domain LMES_RS06610 PF04101 Glycosyltransferase family 28 C-terminal domain LMES_RS06615 PF08245 Mur ligase middle domain LMES_RS06620 PF00953 Glycosyl transferase family 4 LMES_RS06620 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 LMES_RS06625 PF00905 Penicillin binding protein transpeptidase domain LMES_RS06625 PF03717 Penicillin-binding Protein dimerisation domain LMES_RS06625 PF03793 PASTA domain LMES_RS06635 PF01795 MraW methylase family LMES_RS06640 PF02381 MraZ protein LMES_RS06645 PF11877 LMES_RS06645 LMES_RS06650 PF13253 LMES_RS06650 LMES_RS06655 PF02734 DAK2 domain LMES_RS06655 PF13684 Dihydroxyacetone kinase family LMES_RS06660 PF03780 LMES_RS06660 LMES_RS06665 PF00830 Ribosomal L28 family LMES_RS06670 PF00085 Thioredoxin LMES_RS06675 PF04263 Thiamin pyrophosphokinase, catalytic domain LMES_RS06675 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain LMES_RS06680 PF00834 Ribulose-phosphate 3 epimerase family LMES_RS06685 PF03193 Protein of unknown function, DUF258 LMES_RS06685 PF16745 LMES_RS06685 LMES_RS06690 PF00069 Protein kinase domain LMES_RS06690 PF03793 PASTA domain LMES_RS06695 PF13672 Protein phosphatase 2C LMES_RS06700 PF01029 NusB family LMES_RS06700 PF01189 NOL1/NOP2/sun family LMES_RS06705 PF00551 Formyl transferase LMES_RS06705 PF02911 Formyl transferase, C-terminal domain LMES_RS06710 PF00271 Helicase conserved C-terminal domain LMES_RS06710 PF04851 Type III restriction enzyme, res subunit LMES_RS06715 PF13302 Acetyltransferase (GNAT) domain LMES_RS06720 PF13521 AAA domain LMES_RS06725 PF04973 LMES_RS06725 LMES_RS06730 PF01641 SelR domain LMES_RS06735 PF01926 50S ribosome-binding GTPase LMES_RS06740 PF06689 ClpX C4-type zinc finger LMES_RS06740 PF07724 AAA domain (Cdc48 subfamily) LMES_RS06740 PF10431 C-terminal, D2-small domain, of ClpB protein LMES_RS06745 PF01420 Type I restriction modification DNA specificity domain LMES_RS06750 PF00589 Phage integrase family LMES_RS06755 PF01420 Type I restriction modification DNA specificity domain LMES_RS06760 PF02384 N-6 DNA Methylase LMES_RS06760 PF12161 HsdM N-terminal domain LMES_RS06765 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) LMES_RS06765 PF04851 Type III restriction enzyme, res subunit LMES_RS06765 PF12008 Type I restriction and modification enzyme - subunit R C terminal LMES_RS06770 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase LMES_RS06770 PF05697 Bacterial trigger factor protein (TF) LMES_RS06770 PF05698 Bacterial trigger factor protein (TF) C-terminus LMES_RS06775 PF04199 Putative cyclase LMES_RS06780 PF01546 Peptidase family M20/M25/M40 LMES_RS06785 PF09848 Uncharacterized conserved protein (DUF2075) LMES_RS06790 PF01256 Carbohydrate kinase LMES_RS06795 PF03372 Endonuclease/Exonuclease/phosphatase family LMES_RS06800 PF00929 Exonuclease LMES_RS06805 PF00583 Acetyltransferase (GNAT) family LMES_RS06810 PF02367 Uncharacterised P-loop hydrolase UPF0079 LMES_RS06815 PF04203 Sortase family LMES_RS06820 PF04203 Sortase family LMES_RS06825 PF05738 Cna protein B-type domain LMES_RS06825 PF16555 LMES_RS06825 LMES_RS06825 PF16569 LMES_RS06825 LMES_RS06835 PF05738 Cna protein B-type domain LMES_RS06835 PF13519 von Willebrand factor type A domain LMES_RS06840 PF12833 Helix-turn-helix domain LMES_RS06845 PF13353 4Fe-4S single cluster domain LMES_RS06850 PF13597 Anaerobic ribonucleoside-triphosphate reductase LMES_RS06855 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family LMES_RS06860 PF02540 NAD synthase LMES_RS06865 PF05708 Orthopoxvirus protein of unknown function (DUF830) LMES_RS06875 PF00005 ABC transporter LMES_RS06880 PF09819 LMES_RS06880 LMES_RS06885 PF03070 TENA/THI-4/PQQC family LMES_RS06890 PF00155 Aminotransferase class I and II LMES_RS06895 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase LMES_RS06900 PF01502 Phosphoribosyl-AMP cyclohydrolase LMES_RS06905 PF00977 Histidine biosynthesis protein LMES_RS06910 PF00977 Histidine biosynthesis protein LMES_RS06915 PF00117 Glutamine amidotransferase class-I LMES_RS06920 PF00475 Imidazoleglycerol-phosphate dehydratase LMES_RS06925 PF00815 Histidinol dehydrogenase LMES_RS06930 PF01634 ATP phosphoribosyltransferase LMES_RS06935 PF00990 GGDEF domain LMES_RS06940 PF00563 EAL domain LMES_RS06945 PF13641 Glycosyltransferase like family 2 LMES_RS06950 PF01270 Glycosyl hydrolases family 8 LMES_RS06955 PF02811 PHP domain LMES_RS06960 PF08282 haloacid dehalogenase-like hydrolase LMES_RS06970 PF00448 SRP54-type protein, GTPase domain LMES_RS06970 PF02881 SRP54-type protein, helical bundle domain LMES_RS06970 PF02978 Signal peptide binding domain LMES_RS06975 PF04297 Putative helix-turn-helix protein, YlxM / p13 like LMES_RS06980 PF00448 SRP54-type protein, GTPase domain LMES_RS06980 PF02881 SRP54-type protein, helical bundle domain LMES_RS06985 PF02463 RecF/RecN/SMC N terminal domain LMES_RS06985 PF06470 SMC proteins Flexible Hinge Domain LMES_RS06990 PF00035 Double-stranded RNA binding motif LMES_RS06990 PF14622 Ribonuclease-III-like LMES_RS06995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain LMES_RS06995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I LMES_RS06995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II LMES_RS06995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III LMES_RS07000 PF07949 YbbR-like protein LMES_RS07005 PF02457 DisA bacterial checkpoint controller nucleotide-binding LMES_RS07010 PF00999 Sodium/hydrogen exchanger family LMES_RS07015 PF01565 FAD binding domain LMES_RS07015 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain LMES_RS07020 PF00334 Nucleoside diphosphate kinase LMES_RS07025 PF07308 LMES_RS07025 LMES_RS07030 PF05532 CsbD-like LMES_RS07035 PF01119 DNA mismatch repair protein, C-terminal domain LMES_RS07035 PF08676 MutL C terminal dimerisation domain LMES_RS07035 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMES_RS07040 PF00488 MutS domain V LMES_RS07040 PF01624 MutS domain I LMES_RS07040 PF05188 MutS domain II LMES_RS07040 PF05190 MutS family domain IV LMES_RS07040 PF05192 MutS domain III LMES_RS07045 PF01938 TRAM domain LMES_RS07045 PF05958 tRNA (Uracil-5-)-methyltransferase LMES_RS07050 PF00781 Diacylglycerol kinase catalytic domain LMES_RS07055 PF02637 GatB domain LMES_RS07055 PF02934 GatB/GatE catalytic domain LMES_RS07060 PF01425 Amidase LMES_RS07065 PF02686 Glu-tRNAGln amidotransferase C subunit LMES_RS07070 PF00312 Ribosomal protein S15 LMES_RS07075 PF01649 Ribosomal protein S20 LMES_RS07080 PF00270 DEAD/DEAH box helicase LMES_RS07080 PF00271 Helicase conserved C-terminal domain LMES_RS07085 PF01368 DHH family LMES_RS07085 PF02272 DHHA1 domain LMES_RS07090 PF00817 impB/mucB/samB family LMES_RS07090 PF11798 IMS family HHH motif LMES_RS07090 PF11799 impB/mucB/samB family C-terminal domain LMES_RS07095 PF06144 DNA polymerase III, delta subunit LMES_RS07100 PF00753 Metallo-beta-lactamase superfamily LMES_RS07100 PF03772 LMES_RS07100 LMES_RS07105 PF10531 SLBB domain LMES_RS07105 PF12836 Helix-hairpin-helix motif LMES_RS07110 PF05362 Lon protease (S16) C-terminal proteolytic domain LMES_RS07110 PF13180 PDZ domain LMES_RS07115 PF01467 Cytidylyltransferase LMES_RS07120 PF03602 Conserved hypothetical protein 95 LMES_RS07125 PF09902 LMES_RS07125 LMES_RS07130 PF01098 LMES_RS07130 LMES_RS07135 PF05343 M42 glutamyl aminopeptidase LMES_RS07140 PF00300 Histidine phosphatase superfamily (branch 1) LMES_RS07145 PF01554 MatE LMES_RS07150 PF00860 Permease family LMES_RS07155 PF13476 AAA domain LMES_RS07160 PF01316 Arginine repressor, DNA binding domain LMES_RS07160 PF02863 Arginine repressor, C-terminal domain LMES_RS07165 PF01479 S4 domain LMES_RS07165 PF01728 FtsJ-like methyltransferase LMES_RS07170 PF00348 Polyprenyl synthetase LMES_RS07175 PF02609 Exonuclease VII small subunit LMES_RS07180 PF02601 LMES_RS07180 LMES_RS07180 PF13742 LMES_RS07180 LMES_RS07195 PF00132 Bacterial transferase hexapeptide (six repeats) LMES_RS07195 PF12804 MobA-like NTP transferase domain LMES_RS07200 PF00156 Phosphoribosyl transferase domain LMES_RS07200 PF09182 Bacterial purine repressor, N-terminal LMES_RS07205 PF00950 LMES_RS07205 LMES_RS07210 PF00005 ABC transporter LMES_RS07215 PF01297 Periplasmic solute binding protein family LMES_RS07220 PF06257 Protein of unknown function (DUF1021) LMES_RS07225 PF00398 Ribosomal RNA adenine dimethylase LMES_RS07230 PF13331 LMES_RS07230 LMES_RS07230 PF13662 Toprim domain LMES_RS07235 PF01026 TatD related DNase LMES_RS07240 PF01029 NusB family LMES_RS07245 PF03780 LMES_RS07245 LMES_RS07250 PF01132 Elongation factor P (EF-P) OB domain LMES_RS07250 PF08207 Elongation factor P (EF-P) KOW-like domain LMES_RS07250 PF09285 Elongation factor P, C-terminal LMES_RS07255 PF12802 MarR family LMES_RS07260 PF03641 Possible lysine decarboxylase LMES_RS07265 PF07288 Protein of unknown function (DUF1447) LMES_RS07270 PF00753 Metallo-beta-lactamase superfamily LMES_RS07270 PF07521 RNA-metabolising metallo-beta-lactamase LMES_RS07280 PF09682 LMES_RS07280 LMES_RS07285 PF01183 Glycosyl hydrolases family 25 LMES_RS07320 PF16774 LMES_RS07320 LMES_RS07325 PF10145 LMES_RS07325 LMES_RS07335 PF06896 LMES_RS07335 LMES_RS07340 PF04630 LMES_RS07340 LMES_RS07345 PF05657 LMES_RS07345 LMES_RS07350 PF04883 LMES_RS07350 LMES_RS07355 PF05521 Phage head-tail joining protein LMES_RS07360 PF05135 Phage gp6-like head-tail connector protein LMES_RS07365 PF05065 Phage capsid family LMES_RS07370 PF00574 Clp protease LMES_RS07375 PF04860 Phage portal protein LMES_RS07385 PF03354 LMES_RS07385 LMES_RS07390 PF05119 LMES_RS07390 LMES_RS07395 PF01844 HNH endonuclease LMES_RS07435 PF05263 LMES_RS07435 LMES_RS07455 PF01695 IstB-like ATP binding protein LMES_RS07460 PF09524 LMES_RS07460 LMES_RS07465 PF00436 Single-strand binding protein family LMES_RS07470 PF04404 LMES_RS07470 LMES_RS07475 PF07083 LMES_RS07475 LMES_RS07485 PF13443 Cro/C1-type HTH DNA-binding domain LMES_RS07495 PF02498 LMES_RS07495 LMES_RS07495 PF03374 LMES_RS07495 LMES_RS07535 PF00589 Phage integrase family LMES_RS07535 PF14657 LMES_RS07535 LMES_RS07535 PF14659 Phage integrase, N-terminal SAM-like domain LMES_RS07540 PF05656 LMES_RS07540 LMES_RS07550 PF14010 Phosphoenolpyruvate carboxylase LMES_RS07555 PF00781 Diacylglycerol kinase catalytic domain LMES_RS07560 PF03747 ADP-ribosylglycohydrolase LMES_RS07565 PF00438 S-adenosylmethionine synthetase, N-terminal domain LMES_RS07565 PF02772 S-adenosylmethionine synthetase, central domain LMES_RS07565 PF02773 S-adenosylmethionine synthetase, C-terminal domain LMES_RS07575 PF01715 IPP transferase LMES_RS07580 PF03009 Glycerophosphoryl diester phosphodiesterase family LMES_RS07585 PF11240 LMES_RS07585 LMES_RS07590 PF00581 Rhodanese-like domain LMES_RS07595 PF05389 Negative regulator of genetic competence (MecA) LMES_RS07600 PF03960 ArsC family LMES_RS07630 PF00575 S1 RNA binding domain LMES_RS07635 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD LMES_RS07640 PF01192 RNA polymerase Rpb6 LMES_RS07645 PF00625 Guanylate kinase LMES_RS07665 PF00488 MutS domain V LMES_RS07665 PF01713 Smr domain LMES_RS07670 PF02674 LMES_RS07670 LMES_RS07675 PF05164 Cell division protein ZapA LMES_RS07685 PF01351 Ribonuclease HII LMES_RS07685 PF11858 Domain of unknown function (DUF3378) LMES_RS07695 PF06103 LMES_RS07695 LMES_RS07700 PF00013 KH domain LMES_RS07700 PF01966 HD domain LMES_RS07700 PF12072 LMES_RS07700 LMES_RS07705 PF01668 SmpB protein LMES_RS07710 PF00575 S1 RNA binding domain LMES_RS07710 PF00773 RNB domain LMES_RS07710 PF08206 Ribonuclease B OB domain LMES_RS07715 PF03840 Preprotein translocase SecG subunit LMES_RS07720 PF00588 SpoU rRNA Methylase family LMES_RS07720 PF08032 RNA 2'-O ribose methyltransferase substrate binding LMES_RS07725 PF02096 60Kd inner membrane protein LMES_RS07730 PF00708 Acylphosphatase LMES_RS07735 PF00512 His Kinase A (phospho-acceptor) domain LMES_RS07735 PF00672 HAMP domain LMES_RS07735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMES_RS07740 PF00072 Response regulator receiver domain LMES_RS07740 PF00486 Transcriptional regulatory protein, C terminal LMES_RS07745 PF02620 LMES_RS07745 LMES_RS07750 PF05636 HIGH Nucleotidyl Transferase LMES_RS07755 PF13649 Methyltransferase domain LMES_RS07760 PF02410 Oligomerisation domain LMES_RS07765 PF01966 HD domain LMES_RS07770 PF01467 Cytidylyltransferase LMES_RS07775 PF01985 CRS1 / YhbY (CRM) domain LMES_RS07780 PF01926 50S ribosome-binding GTPase LMES_RS07785 PF13419 Haloacid dehalogenase-like hydrolase LMES_RS07795 PF07274 LMES_RS07795 LMES_RS07800 PF13460 NADH(P)-binding LMES_RS07805 PF00881 Nitroreductase family LMES_RS07810 PF02082 Transcriptional regulator LMES_RS07815 PF02324 Glycosyl hydrolase family 70 LMES_RS07820 PF01391 Collagen triple helix repeat (20 copies) LMES_RS07830 PF01381 Helix-turn-helix LMES_RS07835 PF06114 Domain of unknown function (DUF955) LMES_RS07840 PF01473 Putative cell wall binding repeat LMES_RS07840 PF02324 Glycosyl hydrolase family 70 LMES_RS07845 PF01381 Helix-turn-helix LMES_RS07855 PF13303 LMES_RS07855 LMES_RS07860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMES_RS07860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMES_RS07865 PF01040 UbiA prenyltransferase family LMES_RS07870 PF04239 Protein of unknown function (DUF421) LMES_RS07875 PF11694 LMES_RS07875 LMES_RS07880 PF03051 Peptidase C1-like family LMES_RS07885 PF10978 LMES_RS07885 LMES_RS07890 PF00118 TCP-1/cpn60 chaperonin family LMES_RS07895 PF00166 Chaperonin 10 Kd subunit LMES_RS07905 PF06115 LMES_RS07905 LMES_RS07915 PF03609 LMES_RS07915 LMES_RS07920 PF03610 PTS system fructose IIA component LMES_RS07920 PF03830 PTS system sorbose subfamily IIB component LMES_RS07930 PF00881 Nitroreductase family LMES_RS07935 PF06081 LMES_RS07935 LMES_RS07940 PF08282 haloacid dehalogenase-like hydrolase LMES_RS07945 PF02388 FemAB family LMES_RS07950 PF02629 CoA binding domain LMES_RS07950 PF06971 Putative DNA-binding protein N-terminus LMES_RS07955 PF00814 Glycoprotease family LMES_RS07960 PF13673 Acetyltransferase (GNAT) domain LMES_RS07965 PF00583 Acetyltransferase (GNAT) family LMES_RS07970 PF00814 Glycoprotease family LMES_RS07975 PF00391 PEP-utilising enzyme, mobile domain LMES_RS07975 PF02896 PEP-utilising enzyme, TIM barrel domain LMES_RS07975 PF05524 PEP-utilising enzyme, N-terminal LMES_RS07980 PF00381 PTS HPr component phosphorylation site LMES_RS07985 PF02074 Carboxypeptidase Taq (M32) metallopeptidase LMES_RS07990 PF01300 Telomere recombination LMES_RS07990 PF03481 Putative GTP-binding controlling metal-binding LMES_RS07995 PF05175 Methyltransferase small domain LMES_RS08000 PF00472 RF-1 domain LMES_RS08000 PF03462 PCRF domain LMES_RS08005 PF00265 Thymidine kinase LMES_RS08010 PF00877 NlpC/P60 family LMES_RS08015 PF01725 Ham1 family LMES_RS08020 PF08245 Mur ligase middle domain LMES_RS08020 PF08353 LMES_RS08020 LMES_RS08025 PF07685 CobB/CobQ-like glutamine amidotransferase domain LMES_RS08030 PF13520 Amino acid permease LMES_RS08035 PF13303 LMES_RS08035 LMES_RS08040 PF01594 LMES_RS08040 LMES_RS08050 PF00324 Amino acid permease LMES_RS08055 PF01717 Cobalamin-independent synthase, Catalytic domain LMES_RS08055 PF08267 Cobalamin-independent synthase, N-terminal domain LMES_RS08060 PF02219 Methylenetetrahydrofolate reductase LMES_RS08065 PF07722 Peptidase C26 LMES_RS08070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMES_RS08075 PF01053 Cys/Met metabolism PLP-dependent enzyme LMES_RS08080 PF01717 Cobalamin-independent synthase, Catalytic domain LMES_RS08085 PF02664 S-Ribosylhomocysteinase (LuxS) LMES_RS08090 PF01717 Cobalamin-independent synthase, Catalytic domain LMES_RS08095 PF01053 Cys/Met metabolism PLP-dependent enzyme LMES_RS08100 PF01053 Cys/Met metabolism PLP-dependent enzyme LMES_RS08105 PF04204 Homoserine O-succinyltransferase LMES_RS08110 PF00085 Thioredoxin LMES_RS08115 PF13365 Trypsin-like peptidase domain LMES_RS08120 PF00512 His Kinase A (phospho-acceptor) domain LMES_RS08120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMES_RS08125 PF00072 Response regulator receiver domain LMES_RS08125 PF00486 Transcriptional regulatory protein, C terminal LMES_RS08130 PF02452 PemK-like protein LMES_RS08135 PF00842 Alanine racemase, C-terminal domain LMES_RS08135 PF01168 Alanine racemase, N-terminal domain LMES_RS08140 PF01648 4'-phosphopantetheinyl transferase superfamily LMES_RS08145 PF04914 DltD C-terminal region LMES_RS08145 PF04915 DltD N-terminal region LMES_RS08145 PF04918 DltD central region LMES_RS08150 PF00550 Phosphopantetheine attachment site LMES_RS08155 PF03062 LMES_RS08155 LMES_RS08160 PF00501 AMP-binding enzyme LMES_RS08160 PF13193 AMP-binding enzyme C-terminal domain LMES_RS08165 PF12459 LMES_RS08165 LMES_RS08175 PF06028 Alpha/beta hydrolase of unknown function (DUF915) LMES_RS08180 PF04542 Sigma-70 region 2 LMES_RS08185 PF00588 SpoU rRNA Methylase family LMES_RS08185 PF08032 RNA 2'-O ribose methyltransferase substrate binding LMES_RS08190 PF00636 Ribonuclease III domain LMES_RS08195 PF00623 RNA polymerase Rpb1, domain 2 LMES_RS08195 PF04983 RNA polymerase Rpb1, domain 3 LMES_RS08195 PF04997 RNA polymerase Rpb1, domain 1 LMES_RS08195 PF04998 RNA polymerase Rpb1, domain 5 LMES_RS08195 PF05000 RNA polymerase Rpb1, domain 4 LMES_RS08200 PF00562 RNA polymerase Rpb2, domain 6 LMES_RS08200 PF04560 RNA polymerase Rpb2, domain 7 LMES_RS08200 PF04561 RNA polymerase Rpb2, domain 2 LMES_RS08200 PF04563 RNA polymerase beta subunit LMES_RS08200 PF04565 RNA polymerase Rpb2, domain 3 LMES_RS08200 PF10385 RNA polymerase beta subunit external 1 domain LMES_RS08255 PF13303 LMES_RS08255 LMES_RS08260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMES_RS08260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMES_RS08265 PF00155 Aminotransferase class I and II LMES_RS08270 PF00625 Guanylate kinase LMES_RS08275 PF13520 Amino acid permease LMES_RS08280 PF06160 LMES_RS08280 LMES_RS08285 PF00163 Ribosomal protein S4/S9 N-terminal domain LMES_RS08285 PF01479 S4 domain LMES_RS08290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMES_RS08290 PF12793 LMES_RS08290 LMES_RS08295 PF07690 Major Facilitator Superfamily LMES_RS08300 PF07997 Protein of unknown function (DUF1694) LMES_RS08305 PF00004 ATPase family associated with various cellular activities (AAA) LMES_RS08305 PF12002 MgsA AAA+ ATPase C terminal LMES_RS08305 PF16193 LMES_RS08305 LMES_RS08310 PF00582 Universal stress protein family LMES_RS08315 PF00324 Amino acid permease LMES_RS08325 PF03816 Cell envelope-related transcriptional attenuator domain LMES_RS08330 PF13520 Amino acid permease LMES_RS08335 PF00579 tRNA synthetases class I (W and Y) LMES_RS08340 PF01926 50S ribosome-binding GTPase LMES_RS08340 PF13167 LMES_RS08340 LMES_RS08340 PF16360 LMES_RS08340 LMES_RS08355 PF01594 LMES_RS08355 LMES_RS08360 PF00633 Helix-hairpin-helix motif LMES_RS08360 PF00730 HhH-GPD superfamily base excision DNA repair protein LMES_RS08360 PF14815 NUDIX domain LMES_RS08365 PF07690 Major Facilitator Superfamily LMES_RS08370 PF03807 NADP oxidoreductase coenzyme F420-dependent LMES_RS08370 PF14748 Pyrroline-5-carboxylate reductase dimerisation LMES_RS08380 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LMES_RS08385 PF01476 LysM domain LMES_RS08390 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain LMES_RS08390 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain LMES_RS08395 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LMES_RS08395 PF02874 ATP synthase alpha/beta family, beta-barrel domain LMES_RS08400 PF00231 ATP synthase LMES_RS08405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain LMES_RS08405 PF00306 ATP synthase alpha/beta chain, C terminal domain LMES_RS08405 PF02874 ATP synthase alpha/beta family, beta-barrel domain LMES_RS08410 PF00213 ATP synthase delta (OSCP) subunit LMES_RS08415 PF00430 ATP synthase B/B' CF(0) LMES_RS08420 PF00137 ATP synthase subunit C LMES_RS08425 PF00119 ATP synthase A chain LMES_RS08430 PF00860 Permease family LMES_RS08435 PF00300 Histidine phosphatase superfamily (branch 1) LMES_RS08440 PF00313 'Cold-shock' DNA-binding domain LMES_RS08445 PF16069 LMES_RS08445 LMES_RS08450 PF07690 Major Facilitator Superfamily LMES_RS08455 PF00485 Phosphoribulokinase / Uridine kinase family LMES_RS08460 PF13245 Part of AAA domain LMES_RS08460 PF13538 UvrD-like helicase C-terminal domain LMES_RS08465 PF01047 MarR family LMES_RS08470 PF01545 Cation efflux family LMES_RS08475 PF01569 PAP2 superfamily LMES_RS08480 PF13508 Acetyltransferase (GNAT) domain LMES_RS08485 PF08951 Enterocin A Immunity LMES_RS08490 PF04542 Sigma-70 region 2 LMES_RS08495 PF13791 LMES_RS08495 LMES_RS08500 PF03083 Sugar efflux transporter for intercellular exchange LMES_RS08505 PF01381 Helix-turn-helix LMES_RS08515 PF01381 Helix-turn-helix LMES_RS08520 PF00557 Metallopeptidase family M24 LMES_RS08520 PF01321 Creatinase/Prolidase N-terminal domain LMES_RS08525 PF12698 ABC-2 family transporter protein LMES_RS08530 PF00440 Bacterial regulatory proteins, tetR family LMES_RS08530 PF14278 LMES_RS08530 LMES_RS08535 PF00155 Aminotransferase class I and II LMES_RS08535 PF00392 Bacterial regulatory proteins, gntR family LMES_RS08540 PF13536 Multidrug resistance efflux transporter LMES_RS08545 PF01473 Putative cell wall binding repeat LMES_RS08545 PF13306 Leucine rich repeats (6 copies) LMES_RS08550 PF13420 Acetyltransferase (GNAT) domain LMES_RS08555 PF00440 Bacterial regulatory proteins, tetR family LMES_RS08555 PF14278 LMES_RS08555 LMES_RS08565 PF08020 Protein of unknown function (DUF1706) LMES_RS08570 PF09848 Uncharacterized conserved protein (DUF2075) LMES_RS08575 PF13302 Acetyltransferase (GNAT) domain LMES_RS08585 PF12688 Tetratrico peptide repeat LMES_RS08590 PF11611 Domain of unknown function (DUF4352) LMES_RS08620 PF00753 Metallo-beta-lactamase superfamily LMES_RS08625 PF13840 ACT domain LMES_RS08635 PF00005 ABC transporter LMES_RS08635 PF12848 ABC transporter LMES_RS08640 PF01381 Helix-turn-helix LMES_RS08645 PF07690 Major Facilitator Superfamily LMES_RS08655 PF00107 Zinc-binding dehydrogenase LMES_RS08655 PF08240 Alcohol dehydrogenase GroES-like domain LMES_RS08660 PF07690 Major Facilitator Superfamily LMES_RS08665 PF00162 Phosphoglycerate kinase LMES_RS08675 PF00534 Glycosyl transferases group 1 LMES_RS08690 PF01925 LMES_RS08690 LMES_RS08695 PF01431 Peptidase family M13 LMES_RS08695 PF05649 Peptidase family M13 LMES_RS08700 PF00005 ABC transporter LMES_RS08700 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LMES_RS08705 PF00005 ABC transporter LMES_RS08705 PF08352 Oligopeptide/dipeptide transporter, C-terminal region LMES_RS08710 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS08710 PF12911 LMES_RS08710 LMES_RS08715 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS08720 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle LMES_RS08725 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS08730 PF00528 Binding-protein-dependent transport system inner membrane component LMES_RS08735 PF00497 Bacterial extracellular solute-binding proteins, family 3 LMES_RS08740 PF00005 ABC transporter LMES_RS08745 PF00005 ABC transporter LMES_RS08745 PF00664 ABC transporter transmembrane region LMES_RS08750 PF00005 ABC transporter LMES_RS08750 PF00664 ABC transporter transmembrane region LMES_RS08755 PF02698 DUF218 domain LMES_RS08760 PF01118 Semialdehyde dehydrogenase, NAD binding domain LMES_RS08760 PF02774 Semialdehyde dehydrogenase, dimerisation domain LMES_RS08765 PF00842 Alanine racemase, C-terminal domain LMES_RS08765 PF01168 Alanine racemase, N-terminal domain LMES_RS08770 PF03853 YjeF-related protein N-terminus LMES_RS08775 PF02082 Transcriptional regulator LMES_RS08780 PF12051 LMES_RS08780 LMES_RS08785 PF02590 Predicted SPOUT methyltransferase LMES_RS08790 PF13180 PDZ domain LMES_RS08790 PF13365 Trypsin-like peptidase domain LMES_RS08795 PF09648 YycH protein LMES_RS08805 PF00512 His Kinase A (phospho-acceptor) domain LMES_RS08805 PF00672 HAMP domain LMES_RS08805 PF00989 PAS fold LMES_RS08805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase LMES_RS08810 PF00072 Response regulator receiver domain LMES_RS08810 PF00486 Transcriptional regulatory protein, C terminal LMES_RS08815 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase LMES_RS08815 PF14572 Phosphoribosyl synthetase-associated domain LMES_RS08820 PF00578 AhpC/TSA family LMES_RS08825 PF08282 haloacid dehalogenase-like hydrolase LMES_RS08830 PF00180 Isocitrate/isopropylmalate dehydrogenase LMES_RS08835 PF01042 Endoribonuclease L-PSP LMES_RS08840 PF00291 Pyridoxal-phosphate dependent enzyme LMES_RS08840 PF00585 C-terminal regulatory domain of Threonine dehydratase LMES_RS08845 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain LMES_RS08845 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain LMES_RS08850 PF01842 ACT domain LMES_RS08855 PF00205 Thiamine pyrophosphate enzyme, central domain LMES_RS08855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain LMES_RS08855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain LMES_RS08860 PF00005 ABC transporter LMES_RS08865 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase LMES_RS08865 PF09363 XFP C-terminal domain LMES_RS08865 PF09364 XFP N-terminal domain LMES_RS08870 PF00392 Bacterial regulatory proteins, gntR family LMES_RS08870 PF07702 UTRA domain LMES_RS08875 PF04073 Aminoacyl-tRNA editing domain LMES_RS08885 PF00772 DnaB-like helicase N terminal domain LMES_RS08885 PF03796 DnaB-like helicase C terminal domain LMES_RS08890 PF01281 Ribosomal protein L9, N-terminal domain LMES_RS08890 PF03948 Ribosomal protein L9, C-terminal domain LMES_RS08895 PF01368 DHH family LMES_RS08895 PF02272 DHHA1 domain LMES_RS08900 PF01084 Ribosomal protein S18 LMES_RS08905 PF00436 Single-strand binding protein family LMES_RS08910 PF01250 Ribosomal protein S6 LMES_RS08915 PF01546 Peptidase family M20/M25/M40 LMES_RS08920 PF02361 Cobalt transport protein LMES_RS08925 PF00005 ABC transporter LMES_RS08925 PF12558 LMES_RS08925 LMES_RS08930 PF07155 ECF-type riboflavin transporter, S component LMES_RS08935 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase LMES_RS08940 PF00270 DEAD/DEAH box helicase LMES_RS08940 PF00271 Helicase conserved C-terminal domain LMES_RS08940 PF00570 HRDC domain LMES_RS08940 PF09382 RQC domain LMES_RS08940 PF16124 LMES_RS08940 LMES_RS08950 PF01381 Helix-turn-helix LMES_RS08965 PF08951 Enterocin A Immunity LMES_RS08970 PF01381 Helix-turn-helix LMES_RS09000 PF00596 Class II Aldolase and Adducin N-terminal domain LMES_RS09005 PF01261 Xylose isomerase-like TIM barrel LMES_RS09010 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family LMES_RS09015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit LMES_RS09020 PF03611 LMES_RS09020 LMES_RS09025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 LMES_RS09030 PF13483 Beta-lactamase superfamily domain LMES_RS09040 PF08282 haloacid dehalogenase-like hydrolase LMES_RS09045 PF04657 LMES_RS09045 LMES_RS09050 PF03703 LMES_RS09050 LMES_RS09055 PF03703 LMES_RS09055 LMES_RS09060 PF03551 Transcriptional regulator PadR-like family LMES_RS09060 PF10400 Virulence activator alpha C-term LMES_RS09065 PF07690 Major Facilitator Superfamily LMES_RS09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMES_RS09075 PF03466 LysR substrate binding domain LMES_RS09080 PF00324 Amino acid permease LMES_RS09085 PF03553 LMES_RS09085 LMES_RS09095 PF00724 NADH:flavin oxidoreductase / NADH oxidase family LMES_RS09100 PF01638 HxlR-like helix-turn-helix LMES_RS09105 PF00248 Aldo/keto reductase family LMES_RS09110 PF01047 MarR family LMES_RS09115 PF00248 Aldo/keto reductase family LMES_RS09125 PF07690 Major Facilitator Superfamily LMES_RS09130 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain LMES_RS09130 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain LMES_RS09135 PF00768 D-alanyl-D-alanine carboxypeptidase LMES_RS09140 PF01047 MarR family LMES_RS09145 PF01297 Periplasmic solute binding protein family LMES_RS09150 PF01209 ubiE/COQ5 methyltransferase family LMES_RS09155 PF00501 AMP-binding enzyme LMES_RS09155 PF13193 AMP-binding enzyme C-terminal domain LMES_RS09160 PF00583 Acetyltransferase (GNAT) family LMES_RS09165 PF03824 LMES_RS09165 LMES_RS09170 PF13349 LMES_RS09170 LMES_RS09180 PF03551 Transcriptional regulator PadR-like family LMES_RS09185 PF01300 Telomere recombination LMES_RS09190 PF00083 Sugar (and other) transporter LMES_RS09195 PF00694 Aconitase C-terminal domain LMES_RS09200 PF00330 Aconitase family (aconitate hydratase) LMES_RS09205 PF00180 Isocitrate/isopropylmalate dehydrogenase LMES_RS09210 PF00682 HMGL-like LMES_RS09215 PF01883 Domain of unknown function DUF59 LMES_RS09220 PF01458 Uncharacterized protein family (UPF0051) LMES_RS09225 PF01592 NifU-like N terminal domain LMES_RS09230 PF00266 Aminotransferase class-V LMES_RS09235 PF01458 Uncharacterized protein family (UPF0051) LMES_RS09240 PF00005 ABC transporter LMES_RS09250 PF00920 Dehydratase family LMES_RS09255 PF01883 Domain of unknown function DUF59 LMES_RS09260 PF01758 Sodium Bile acid symporter family LMES_RS09265 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain LMES_RS09265 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain LMES_RS09270 PF00579 tRNA synthetases class I (W and Y) LMES_RS09275 PF03551 Transcriptional regulator PadR-like family LMES_RS09280 PF13349 LMES_RS09280 LMES_RS09285 PF04024 LMES_RS09285 LMES_RS09290 PF07859 alpha/beta hydrolase fold LMES_RS09295 PF04262 Glutamate-cysteine ligase LMES_RS09300 PF02687 LMES_RS09300 LMES_RS09300 PF12704 MacB-like periplasmic core domain LMES_RS09305 PF00005 ABC transporter LMES_RS09310 PF13533 Biotin-lipoyl like LMES_RS09320 PF01381 Helix-turn-helix LMES_RS09335 PF03601 LMES_RS09335 LMES_RS09340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family LMES_RS09340 PF03466 LysR substrate binding domain LMES_RS09345 PF00156 Phosphoribosyl transferase domain LMES_RS09350 PF01544 CorA-like Mg2+ transporter protein LMES_RS09355 PF13673 Acetyltransferase (GNAT) domain LMES_RS09360 PF00717 Peptidase S24-like LMES_RS09365 PF02096 60Kd inner membrane protein LMES_RS09370 PF00825 Ribonuclease P LMES_RS09375 PF00468 Ribosomal protein L34 LMES_RS09380 PF00027 Cyclic nucleotide-binding domain LMES_RS09380 PF13545 Crp-like helix-turn-helix domain LMES_RS09385 PF07992 Pyridine nucleotide-disulphide oxidoreductase LMES_RS09395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase LMES_RS09395 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase LMES_RS09400 PF08282 haloacid dehalogenase-like hydrolase LMES_RS09405 PF13454 FAD-NAD(P)-binding LMES_RS09410 PF03547 LMES_RS09410 LMES_RS09415 PF00194 Eukaryotic-type carbonic anhydrase LMES_RS09430 PF01473 Putative cell wall binding repeat LMES_RS09440 PF00535 Glycosyl transferase family 2