LMES_RS00005	SM00382	ATPases associated with a variety of cellular activities
LMES_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
LMES_RS00010	SM00480	DNA polymerase III beta subunit
LMES_RS00025	SM00387	Histidine kinase-like ATPases
LMES_RS00025	SM00433	TopoisomeraseII
LMES_RS00030	SM00434	DNA Topoisomerase IV
LMES_RS00040	SM00850	LytTr DNA-binding domain
LMES_RS00220	SM00422	helix_turn_helix, mercury resistance
LMES_RS00245	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LMES_RS00250	SM00382	ATPases associated with a variety of cellular activities
LMES_RS00260	SM00382	ATPases associated with a variety of cellular activities
LMES_RS00295	SM00859	Semialdehyde dehydrogenase, NAD binding domain
LMES_RS00330	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS00335	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS00355	SM00382	ATPases associated with a variety of cellular activities
LMES_RS00375	SM00382	ATPases associated with a variety of cellular activities
LMES_RS00390	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS00405	SM00382	ATPases associated with a variety of cellular activities
LMES_RS00425	SM00448	cheY-homologous receiver domain
LMES_RS00425	SM00850	LytTr DNA-binding domain
LMES_RS00450	SM00382	ATPases associated with a variety of cellular activities
LMES_RS00450	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS00505	SM00382	ATPases associated with a variety of cellular activities
LMES_RS00510	SM00062	Bacterial periplasmic substrate-binding proteins
LMES_RS00610	SM00062	Bacterial periplasmic substrate-binding proteins
LMES_RS00625	SM00382	ATPases associated with a variety of cellular activities
LMES_RS00680	SM00382	ATPases associated with a variety of cellular activities
LMES_RS00680	SM01086	C-terminal, D2-small domain, of ClpB protein
LMES_RS00715	SM00382	ATPases associated with a variety of cellular activities
LMES_RS00735	SM00840	LMES_RS00735
LMES_RS00840	SM00957	SecA DEAD-like domain
LMES_RS00840	SM00958	SecA preprotein cross-linking domain
LMES_RS00845	SM00937	LMES_RS00845
LMES_RS00850	SM00382	ATPases associated with a variety of cellular activities
LMES_RS00850	SM01086	C-terminal, D2-small domain, of ClpB protein
LMES_RS00865	SM00838	Elongation factor G C-terminus
LMES_RS00865	SM00889	Elongation factor G, domain IV
LMES_RS00875	SM00382	ATPases associated with a variety of cellular activities
LMES_RS00895	SM01403	LMES_RS00895
LMES_RS00915	SM01382	LMES_RS00915
LMES_RS00915	SM01383	LMES_RS00915
LMES_RS00930	SM00322	K homology RNA-binding domain
LMES_RS00950	SM01374	LMES_RS00950
LMES_RS01005	SM00316	Ribosomal protein S1-like RNA-binding domain
LMES_RS01025	SM00662	RNA polymerases D
LMES_RS01045	SM00382	ATPases associated with a variety of cellular activities
LMES_RS01050	SM00382	ATPases associated with a variety of cellular activities
LMES_RS01110	SM01192	LMES_RS01110
LMES_RS01110	SM01193	LMES_RS01110
LMES_RS01140	SM00487	DEAD-like helicases superfamily
LMES_RS01140	SM00490	helicase superfamily c-terminal domain
LMES_RS01160	SM00855	Phosphoglycerate mutase family
LMES_RS01165	SM00116	Domain in cystathionine beta-synthase and other proteins.
LMES_RS01165	SM01091	Transporter associated domain
LMES_RS01190	SM00014	Acid phosphatase homologues
LMES_RS01240	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
LMES_RS01240	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
LMES_RS01245	SM00649	Ribosomal protein L11/L12
LMES_RS01280	SM00382	ATPases associated with a variety of cellular activities
LMES_RS01285	SM00493	LMES_RS01285
LMES_RS01325	SM00899	LMES_RS01325
LMES_RS01335	SM00354	helix_turn _helix lactose operon repressor
LMES_RS01345	SM00640	Glycosyl hydrolases family 32
LMES_RS01395	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
LMES_RS01425	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
LMES_RS01440	SM00347	helix_turn_helix multiple antibiotic resistance protein
LMES_RS01460	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
LMES_RS01465	SM00822	LMES_RS01465
LMES_RS01470	SM00825	Beta-ketoacyl synthase
LMES_RS01485	SM00878	Biotin carboxylase C-terminal domain
LMES_RS01515	SM00257	Lysin motif
LMES_RS01525	SM00257	Lysin motif
LMES_RS01540	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
LMES_RS01550	SM00382	ATPases associated with a variety of cellular activities
LMES_RS01600	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
LMES_RS01630	SM00470	ParB-like nuclease domain
LMES_RS01650	SM00448	cheY-homologous receiver domain
LMES_RS01650	SM00862	Transcriptional regulatory protein, C terminal
LMES_RS01655	SM00387	Histidine kinase-like ATPases
LMES_RS01655	SM00388	His Kinase A (phosphoacceptor) domain
LMES_RS01675	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LMES_RS01680	SM00382	ATPases associated with a variety of cellular activities
LMES_RS01700	SM00382	ATPases associated with a variety of cellular activities
LMES_RS01710	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS01740	SM00062	Bacterial periplasmic substrate-binding proteins
LMES_RS01750	SM00382	ATPases associated with a variety of cellular activities
LMES_RS01765	SM00382	ATPases associated with a variety of cellular activities
LMES_RS01780	SM01323	LMES_RS01780
LMES_RS01805	SM00855	Phosphoglycerate mutase family
LMES_RS01815	SM00642	Alpha-amylase domain
LMES_RS01820	SM00382	ATPases associated with a variety of cellular activities
LMES_RS01825	SM00382	ATPases associated with a variety of cellular activities
LMES_RS01855	SM00487	DEAD-like helicases superfamily
LMES_RS01855	SM00490	helicase superfamily c-terminal domain
LMES_RS01860	SM00382	ATPases associated with a variety of cellular activities
LMES_RS01890	SM00487	DEAD-like helicases superfamily
LMES_RS01890	SM00490	helicase superfamily c-terminal domain
LMES_RS01890	SM00982	LMES_RS01890
LMES_RS01890	SM01058	CarD-like/TRCF domain
LMES_RS01895	SM00363	S4 RNA-binding domain
LMES_RS01905	SM00977	TilS substrate C-terminal domain
LMES_RS01915	SM00382	ATPases associated with a variety of cellular activities
LMES_RS01970	SM00382	ATPases associated with a variety of cellular activities
LMES_RS01980	SM00850	LytTr DNA-binding domain
LMES_RS01990	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
LMES_RS01990	SM00493	LMES_RS01990
LMES_RS02005	SM01005	Alanine racemase, C-terminal domain
LMES_RS02025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LMES_RS02025	SM00866	LMES_RS02025
LMES_RS02035	SM00382	ATPases associated with a variety of cellular activities
LMES_RS02035	SM00930	LMES_RS02035
LMES_RS02065	SM00831	Cation transporter/ATPase, N-terminus
LMES_RS02085	SM00062	Bacterial periplasmic substrate-binding proteins
LMES_RS02085	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
LMES_RS02090	SM00382	ATPases associated with a variety of cellular activities
LMES_RS02095	SM00062	Bacterial periplasmic substrate-binding proteins
LMES_RS02120	SM00997	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
LMES_RS02135	SM00873	B3/4 domain
LMES_RS02135	SM00874	tRNA synthetase B5 domain
LMES_RS02135	SM00896	Ferredoxin-fold anticodon binding domain
LMES_RS02165	SM00487	DEAD-like helicases superfamily
LMES_RS02165	SM00490	helicase superfamily c-terminal domain
LMES_RS02245	SM00047	Lysozyme subfamily 2
LMES_RS02270	SM00382	ATPases associated with a variety of cellular activities
LMES_RS02305	SM00382	ATPases associated with a variety of cellular activities
LMES_RS02310	SM00382	ATPases associated with a variety of cellular activities
LMES_RS02380	SM00354	helix_turn _helix lactose operon repressor
LMES_RS02420	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
LMES_RS02420	SM00940	X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
LMES_RS02435	SM00642	Alpha-amylase domain
LMES_RS02440	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LMES_RS02440	SM00866	LMES_RS02440
LMES_RS02445	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
LMES_RS02485	SM00465	GIY-YIG type nucleases (URI domain)
LMES_RS02520	SM00487	DEAD-like helicases superfamily
LMES_RS02520	SM00490	helicase superfamily c-terminal domain
LMES_RS02525	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
LMES_RS02525	SM01232	LMES_RS02525
LMES_RS02570	SM00487	DEAD-like helicases superfamily
LMES_RS02570	SM00490	helicase superfamily c-terminal domain
LMES_RS02585	SM00731	SprT homologues.
LMES_RS02610	SM00354	helix_turn _helix lactose operon repressor
LMES_RS02645	SM01350	LMES_RS02645
LMES_RS02670	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
LMES_RS02680	SM00732	Likely ribonuclease with RNase H fold.
LMES_RS02700	SM00382	ATPases associated with a variety of cellular activities
LMES_RS02705	SM00382	ATPases associated with a variety of cellular activities
LMES_RS02710	SM00047	Lysozyme subfamily 2
LMES_RS02730	SM00278	Helix-hairpin-helix DNA-binding motif class 1
LMES_RS02730	SM00292	breast cancer carboxy-terminal domain
LMES_RS02730	SM00532	Ligase N family
LMES_RS02745	SM00382	ATPases associated with a variety of cellular activities
LMES_RS02745	SM01086	C-terminal, D2-small domain, of ClpB protein
LMES_RS02770	SM00382	ATPases associated with a variety of cellular activities
LMES_RS02775	SM00062	Bacterial periplasmic substrate-binding proteins
LMES_RS02780	SM00155	Phospholipase D. Active site motifs.
LMES_RS02805	SM00382	ATPases associated with a variety of cellular activities
LMES_RS02810	SM00448	cheY-homologous receiver domain
LMES_RS02810	SM00862	Transcriptional regulatory protein, C terminal
LMES_RS02820	SM00387	Histidine kinase-like ATPases
LMES_RS02820	SM00388	His Kinase A (phosphoacceptor) domain
LMES_RS02840	SM00382	ATPases associated with a variety of cellular activities
LMES_RS02845	SM00382	ATPases associated with a variety of cellular activities
LMES_RS02900	SM00354	helix_turn _helix lactose operon repressor
LMES_RS02940	SM00382	ATPases associated with a variety of cellular activities
LMES_RS02960	SM00278	Helix-hairpin-helix DNA-binding motif class 1
LMES_RS02980	SM00382	ATPases associated with a variety of cellular activities
LMES_RS03000	SM00849	Metallo-beta-lactamase superfamily
LMES_RS03015	SM00382	ATPases associated with a variety of cellular activities
LMES_RS03040	SM00014	Acid phosphatase homologues
LMES_RS03085	SM00257	Lysin motif
LMES_RS03100	SM01240	LMES_RS03100
LMES_RS03105	SM01240	LMES_RS03105
LMES_RS03145	SM00062	Bacterial periplasmic substrate-binding proteins
LMES_RS03145	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
LMES_RS03170	SM00843	LMES_RS03170
LMES_RS03175	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
LMES_RS03215	SM01130	LMES_RS03215
LMES_RS03255	SM00954	Region found in RelA / SpoT proteins
LMES_RS03270	SM00116	Domain in cystathionine beta-synthase and other proteins.
LMES_RS03270	SM00924	MgtE intracellular N domain
LMES_RS03300	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
LMES_RS03310	SM00479	LMES_RS03310
LMES_RS03310	SM00481	DNA polymerase alpha chain like domain
LMES_RS03340	SM00855	Phosphoglycerate mutase family
LMES_RS03345	SM00382	ATPases associated with a variety of cellular activities
LMES_RS03350	SM01400	LMES_RS03350
LMES_RS03365	SM01209	LMES_RS03365
LMES_RS03365	SM01210	LMES_RS03365
LMES_RS03380	SM00357	Cold shock protein domain
LMES_RS03420	SM00640	Glycosyl hydrolases family 32
LMES_RS03425	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
LMES_RS03425	SM00474	3'-5' exonuclease
LMES_RS03425	SM00475	5'-3' exonuclease
LMES_RS03425	SM00482	DNA polymerase A domain
LMES_RS03435	SM00382	ATPases associated with a variety of cellular activities
LMES_RS03440	SM00422	helix_turn_helix, mercury resistance
LMES_RS03445	SM01230	LMES_RS03445
LMES_RS03450	SM01001	AIR carboxylase
LMES_RS03470	SM01211	LMES_RS03470
LMES_RS03495	SM00798	AICARFT/IMPCHase bienzyme
LMES_RS03495	SM00851	MGS-like domain
LMES_RS03510	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
LMES_RS03545	SM00861	Transketolase, pyrimidine binding domain
LMES_RS03570	SM00892	DNA/RNA non-specific endonuclease
LMES_RS03585	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
LMES_RS03585	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
LMES_RS03585	SM00493	LMES_RS03585
LMES_RS03620	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
LMES_RS03625	SM00028	Tetratricopeptide repeats
LMES_RS03685	SM00382	ATPases associated with a variety of cellular activities
LMES_RS03720	SM00481	DNA polymerase alpha chain like domain
LMES_RS03760	SM00870	LMES_RS03760
LMES_RS03825	SM00354	helix_turn _helix lactose operon repressor
LMES_RS03850	SM00116	Domain in cystathionine beta-synthase and other proteins.
LMES_RS03870	SM00382	ATPases associated with a variety of cellular activities
LMES_RS03910	SM00382	ATPases associated with a variety of cellular activities
LMES_RS03975	SM00831	Cation transporter/ATPase, N-terminus
LMES_RS03985	SM00642	Alpha-amylase domain
LMES_RS03990	SM00354	helix_turn _helix lactose operon repressor
LMES_RS04015	SM00448	cheY-homologous receiver domain
LMES_RS04015	SM00862	Transcriptional regulatory protein, C terminal
LMES_RS04020	SM00387	Histidine kinase-like ATPases
LMES_RS04025	SM00382	ATPases associated with a variety of cellular activities
LMES_RS04065	SM00342	helix_turn_helix, arabinose operon control protein
LMES_RS04100	SM00422	helix_turn_helix, mercury resistance
LMES_RS04115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LMES_RS04135	SM01007	Class II Aldolase and Adducin N-terminal domain
LMES_RS04195	SM01217	LMES_RS04195
LMES_RS04225	SM00354	helix_turn _helix lactose operon repressor
LMES_RS04245	SM00382	ATPases associated with a variety of cellular activities
LMES_RS04270	SM00354	helix_turn _helix lactose operon repressor
LMES_RS04290	SM00354	helix_turn _helix lactose operon repressor
LMES_RS04295	SM00642	Alpha-amylase domain
LMES_RS04305	SM00642	Alpha-amylase domain
LMES_RS04310	SM01061	CAT RNA binding domain
LMES_RS04340	SM00354	helix_turn _helix lactose operon repressor
LMES_RS04355	SM00642	Alpha-amylase domain
LMES_RS04400	SM00829	Enoylreductase
LMES_RS04415	SM00986	Uracil DNA glycosylase superfamily
LMES_RS04415	SM00987	UreE urease accessory protein, C-terminal domain 
LMES_RS04460	SM01350	LMES_RS04460
LMES_RS04570	SM00347	helix_turn_helix multiple antibiotic resistance protein
LMES_RS04580	SM00829	Enoylreductase
LMES_RS04595	SM00382	ATPases associated with a variety of cellular activities
LMES_RS04620	SM00448	cheY-homologous receiver domain
LMES_RS04620	SM00862	Transcriptional regulatory protein, C terminal
LMES_RS04625	SM00387	Histidine kinase-like ATPases
LMES_RS04625	SM00388	His Kinase A (phosphoacceptor) domain
LMES_RS04650	SM00347	helix_turn_helix multiple antibiotic resistance protein
LMES_RS04660	SM00831	Cation transporter/ATPase, N-terminus
LMES_RS04675	SM00422	helix_turn_helix, mercury resistance
LMES_RS04820	SM00155	Phospholipase D. Active site motifs.
LMES_RS04830	SM00347	helix_turn_helix multiple antibiotic resistance protein
LMES_RS04845	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS04865	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS04935	SM00347	helix_turn_helix multiple antibiotic resistance protein
LMES_RS04980	SM01022	LMES_RS04980
LMES_RS05005	SM00342	helix_turn_helix, arabinose operon control protein
LMES_RS05010	SM00421	helix_turn_helix, Lux Regulon
LMES_RS05010	SM00448	cheY-homologous receiver domain
LMES_RS05015	SM00387	Histidine kinase-like ATPases
LMES_RS05040	SM00342	helix_turn_helix, arabinose operon control protein
LMES_RS05090	SM00830	Chorismate mutase type II
LMES_RS05125	SM00861	Transketolase, pyrimidine binding domain
LMES_RS05205	SM00382	ATPases associated with a variety of cellular activities
LMES_RS05225	SM00829	Enoylreductase
LMES_RS05235	SM00838	Elongation factor G C-terminus
LMES_RS05290	SM00563	Phosphate acyltransferases
LMES_RS05310	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
LMES_RS05315	SM00851	MGS-like domain
LMES_RS05315	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
LMES_RS05315	SM01209	LMES_RS05315
LMES_RS05320	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
LMES_RS05355	SM00836	DALR anticodon binding domain
LMES_RS05355	SM01016	Arginyl tRNA synthetase N terminal dom
LMES_RS05375	SM00244	prohibitin homologues
LMES_RS05410	SM00382	ATPases associated with a variety of cellular activities
LMES_RS05445	SM00382	ATPases associated with a variety of cellular activities
LMES_RS05455	SM00062	Bacterial periplasmic substrate-binding proteins
LMES_RS05455	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
LMES_RS05485	SM00400	zinc finger
LMES_RS05485	SM00493	LMES_RS05485
LMES_RS05530	SM00382	ATPases associated with a variety of cellular activities
LMES_RS05545	SM00287	Bacterial SH3 domain homologues
LMES_RS05545	SM00646	LMES_RS05545
LMES_RS05555	SM00316	Ribosomal protein S1-like RNA-binding domain
LMES_RS05555	SM00732	Likely ribonuclease with RNase H fold.
LMES_RS05595	SM00411	bacterial (prokaryotic) histone like domain
LMES_RS05605	SM00316	Ribosomal protein S1-like RNA-binding domain
LMES_RS05625	SM00363	S4 RNA-binding domain
LMES_RS05700	SM00342	helix_turn_helix, arabinose operon control protein
LMES_RS05830	SM00838	Elongation factor G C-terminus
LMES_RS05850	SM00271	DnaJ molecular chaperone homology domain
LMES_RS05870	SM00904	Riboflavin kinase
LMES_RS05910	SM00316	Ribosomal protein S1-like RNA-binding domain
LMES_RS05930	SM01131	LMES_RS05930
LMES_RS05935	SM00434	DNA Topoisomerase IV
LMES_RS05940	SM00387	Histidine kinase-like ATPases
LMES_RS05940	SM00433	TopoisomeraseII
LMES_RS05945	SM01207	LMES_RS05945
LMES_RS05955	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
LMES_RS05955	SM00954	Region found in RelA / SpoT proteins
LMES_RS05970	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
LMES_RS05975	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
LMES_RS05985	SM00363	S4 RNA-binding domain
LMES_RS06010	SM00981	LMES_RS06010
LMES_RS06040	SM00479	LMES_RS06040
LMES_RS06070	SM00998	Adenylosuccinate lyase C-terminus
LMES_RS06190	SM00641	Glycosyl hydrolases family 25
LMES_RS06430	SM00788	Adenylosuccinate synthetase
LMES_RS06470	SM00986	Uracil DNA glycosylase superfamily
LMES_RS06470	SM00987	UreE urease accessory protein, C-terminal domain 
LMES_RS06510	SM00849	Metallo-beta-lactamase superfamily
LMES_RS06580	SM00363	S4 RNA-binding domain
LMES_RS06595	SM00864	Tubulin/FtsZ family, GTPase domain
LMES_RS06595	SM00865	Tubulin/FtsZ family, C-terminal domain
LMES_RS06600	SM00842	Cell division protein FtsA
LMES_RS06625	SM00740	LMES_RS06625
LMES_RS06655	SM01120	LMES_RS06655
LMES_RS06655	SM01121	LMES_RS06655
LMES_RS06675	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
LMES_RS06690	SM00220	Serine/Threonine protein kinases, catalytic domain
LMES_RS06690	SM00740	LMES_RS06690
LMES_RS06695	SM00331	Sigma factor PP2C-like phosphatases
LMES_RS06695	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
LMES_RS06710	SM00487	DEAD-like helicases superfamily
LMES_RS06710	SM00490	helicase superfamily c-terminal domain
LMES_RS06740	SM00382	ATPases associated with a variety of cellular activities
LMES_RS06740	SM00994	ClpX C4-type zinc finger
LMES_RS06740	SM01086	C-terminal, D2-small domain, of ClpB protein
LMES_RS06765	SM00487	DEAD-like helicases superfamily
LMES_RS06800	SM00479	LMES_RS06800
LMES_RS06835	SM00327	von Willebrand factor (vWF) type A domain
LMES_RS06840	SM00342	helix_turn_helix, arabinose operon control protein
LMES_RS06875	SM00382	ATPases associated with a variety of cellular activities
LMES_RS06935	SM00267	diguanylate cyclase
LMES_RS06940	SM00052	Putative diguanylate phosphodiesterase
LMES_RS06970	SM00382	ATPases associated with a variety of cellular activities
LMES_RS06970	SM00962	SRP54-type protein, GTPase domain
LMES_RS06970	SM00963	SRP54-type protein, helical bundle domain
LMES_RS06980	SM00382	ATPases associated with a variety of cellular activities
LMES_RS06980	SM00962	SRP54-type protein, GTPase domain
LMES_RS06980	SM00963	SRP54-type protein, helical bundle domain
LMES_RS06985	SM00968	SMC proteins Flexible Hinge Domain
LMES_RS06990	SM00358	Double-stranded RNA binding motif
LMES_RS06990	SM00535	Ribonuclease III family
LMES_RS07020	SM00562	LMES_RS07020
LMES_RS07035	SM00853	MutL C terminal dimerisation domain
LMES_RS07035	SM01340	LMES_RS07035
LMES_RS07040	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
LMES_RS07040	SM00534	ATPase domain of DNA mismatch repair MUTS family
LMES_RS07050	SM00046	Diacylglycerol kinase catalytic domain (presumed)
LMES_RS07055	SM00845	GatB domain
LMES_RS07070	SM01387	LMES_RS07070
LMES_RS07080	SM00487	DEAD-like helicases superfamily
LMES_RS07080	SM00490	helicase superfamily c-terminal domain
LMES_RS07105	SM00278	Helix-hairpin-helix DNA-binding motif class 1
LMES_RS07140	SM00855	Phosphoglycerate mutase family
LMES_RS07165	SM00363	S4 RNA-binding domain
LMES_RS07210	SM00382	ATPases associated with a variety of cellular activities
LMES_RS07225	SM00650	Ribosomal RNA adenine dimethylases
LMES_RS07230	SM00493	LMES_RS07230
LMES_RS07250	SM00841	Elongation factor P, C-terminal
LMES_RS07250	SM01185	LMES_RS07250
LMES_RS07255	SM00347	helix_turn_helix multiple antibiotic resistance protein
LMES_RS07270	SM00849	Metallo-beta-lactamase superfamily
LMES_RS07285	SM00641	Glycosyl hydrolases family 25
LMES_RS07395	SM00507	HNH nucleases
LMES_RS07455	SM00382	ATPases associated with a variety of cellular activities
LMES_RS07485	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS07495	SM01040	BRO family, N-terminal domain
LMES_RS07590	SM00450	Rhodanese Homology Domain
LMES_RS07630	SM00316	Ribosomal protein S1-like RNA-binding domain
LMES_RS07640	SM01409	LMES_RS07640
LMES_RS07645	SM00072	Guanylate kinase homologues.
LMES_RS07665	SM00463	Small MutS-related domain
LMES_RS07665	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
LMES_RS07665	SM00534	ATPase domain of DNA mismatch repair MUTS family
LMES_RS07700	SM00322	K homology RNA-binding domain
LMES_RS07700	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
LMES_RS07710	SM00316	Ribosomal protein S1-like RNA-binding domain
LMES_RS07710	SM00955	LMES_RS07710
LMES_RS07720	SM00967	RNA 2'-O ribose methyltransferase substrate binding
LMES_RS07735	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
LMES_RS07735	SM00387	Histidine kinase-like ATPases
LMES_RS07735	SM00388	His Kinase A (phosphoacceptor) domain
LMES_RS07740	SM00448	cheY-homologous receiver domain
LMES_RS07740	SM00862	Transcriptional regulatory protein, C terminal
LMES_RS07765	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
LMES_RS07775	SM01103	LMES_RS07775
LMES_RS07830	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS07845	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS07895	SM00883	Chaperonin 10 Kd subunit
LMES_RS07950	SM00881	CoA binding domain
LMES_RS08000	SM00937	LMES_RS08000
LMES_RS08120	SM00387	Histidine kinase-like ATPases
LMES_RS08120	SM00388	His Kinase A (phosphoacceptor) domain
LMES_RS08125	SM00448	cheY-homologous receiver domain
LMES_RS08125	SM00862	Transcriptional regulatory protein, C terminal
LMES_RS08135	SM01005	Alanine racemase, C-terminal domain
LMES_RS08185	SM00967	RNA 2'-O ribose methyltransferase substrate binding
LMES_RS08195	SM00663	RNA polymerase I subunit A N-terminus
LMES_RS08270	SM00072	Guanylate kinase homologues.
LMES_RS08285	SM00363	S4 RNA-binding domain
LMES_RS08285	SM01390	LMES_RS08285
LMES_RS08305	SM00382	ATPases associated with a variety of cellular activities
LMES_RS08360	SM00478	endonuclease III
LMES_RS08385	SM00257	Lysin motif
LMES_RS08395	SM00382	ATPases associated with a variety of cellular activities
LMES_RS08435	SM00855	Phosphoglycerate mutase family
LMES_RS08440	SM00357	Cold shock protein domain
LMES_RS08465	SM00347	helix_turn_helix multiple antibiotic resistance protein
LMES_RS08475	SM00014	Acid phosphatase homologues
LMES_RS08505	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS08515	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS08535	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LMES_RS08635	SM00382	ATPases associated with a variety of cellular activities
LMES_RS08640	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS08655	SM00829	Enoylreductase
LMES_RS08700	SM00382	ATPases associated with a variety of cellular activities
LMES_RS08705	SM00382	ATPases associated with a variety of cellular activities
LMES_RS08735	SM00062	Bacterial periplasmic substrate-binding proteins
LMES_RS08735	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
LMES_RS08740	SM00382	ATPases associated with a variety of cellular activities
LMES_RS08745	SM00382	ATPases associated with a variety of cellular activities
LMES_RS08750	SM00382	ATPases associated with a variety of cellular activities
LMES_RS08760	SM00859	Semialdehyde dehydrogenase, NAD binding domain
LMES_RS08765	SM01005	Alanine racemase, C-terminal domain
LMES_RS08790	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
LMES_RS08805	SM00091	PAS domain
LMES_RS08805	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
LMES_RS08805	SM00387	Histidine kinase-like ATPases
LMES_RS08805	SM00388	His Kinase A (phosphoacceptor) domain
LMES_RS08810	SM00448	cheY-homologous receiver domain
LMES_RS08810	SM00862	Transcriptional regulatory protein, C terminal
LMES_RS08815	SM01400	LMES_RS08815
LMES_RS08830	SM01329	LMES_RS08830
LMES_RS08860	SM00382	ATPases associated with a variety of cellular activities
LMES_RS08870	SM00345	helix_turn_helix gluconate operon transcriptional repressor
LMES_RS08870	SM00866	LMES_RS08870
LMES_RS08925	SM00382	ATPases associated with a variety of cellular activities
LMES_RS08940	SM00341	Helicase and RNase D C-terminal
LMES_RS08940	SM00487	DEAD-like helicases superfamily
LMES_RS08940	SM00490	helicase superfamily c-terminal domain
LMES_RS08940	SM00956	LMES_RS08940
LMES_RS08950	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS08970	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS09000	SM01007	Class II Aldolase and Adducin N-terminal domain
LMES_RS09010	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
LMES_RS09110	SM00347	helix_turn_helix multiple antibiotic resistance protein
LMES_RS09140	SM00347	helix_turn_helix multiple antibiotic resistance protein
LMES_RS09205	SM01329	LMES_RS09205
LMES_RS09240	SM00382	ATPases associated with a variety of cellular activities
LMES_RS09245	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS09305	SM00382	ATPases associated with a variety of cellular activities
LMES_RS09320	SM00530	Helix-turn-helix XRE-family like proteins 
LMES_RS09380	SM00100	Cyclic nucleotide-monophosphate binding domain
LMES_RS09380	SM00419	helix_turn_helix, cAMP Regulatory protein
LMES_RS09415	SM01057	Eukaryotic-type carbonic anhydrase
